JO40_09965 93394107112247f6a640320182812431 329 SUPERFAMILY SSF51735 1 315 1.93E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_09965 93394107112247f6a640320182812431 329 Gene3D G3DSA:3.40.50.720 2 317 2.5E-48 T 14-10-2018 JO40_09965 93394107112247f6a640320182812431 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 8.5E-27 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JO40_03355 596e698426df97b46be8b07d278883c1 130 SUPERFAMILY SSF160148 51 123 7.59E-25 T 14-10-2018 IPR036593 CPE0013-like superfamily JO40_03355 596e698426df97b46be8b07d278883c1 130 Gene3D G3DSA:3.10.530.10 52 120 5.0E-22 T 14-10-2018 IPR036593 CPE0013-like superfamily JO40_03355 596e698426df97b46be8b07d278883c1 130 Pfam PF07892 Protein of unknown function (DUF1667) 40 120 2.8E-31 T 14-10-2018 IPR012460 Protein of unknown function DUF1667 JO40_11215 583148ca87bf5abffbd571e3794874b1 343 SMART SM00382 53 187 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11215 583148ca87bf5abffbd571e3794874b1 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 1.5E-139 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JO40_11215 583148ca87bf5abffbd571e3794874b1 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 333 6.0E-39 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JO40_11215 583148ca87bf5abffbd571e3794874b1 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 150.28 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JO40_11215 583148ca87bf5abffbd571e3794874b1 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 10 237 4.8E-103 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 JO40_11215 583148ca87bf5abffbd571e3794874b1 343 SUPERFAMILY SSF46785 258 332 5.85E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_11215 583148ca87bf5abffbd571e3794874b1 343 Gene3D G3DSA:1.10.10.10 259 336 3.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_11215 583148ca87bf5abffbd571e3794874b1 343 Gene3D G3DSA:1.10.8.60 184 258 8.7E-29 T 14-10-2018 JO40_11215 583148ca87bf5abffbd571e3794874b1 343 SUPERFAMILY SSF52540 22 250 8.6E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11215 583148ca87bf5abffbd571e3794874b1 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 5.8E-31 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JO40_11215 583148ca87bf5abffbd571e3794874b1 343 Gene3D G3DSA:3.40.50.300 22 183 1.5E-35 T 14-10-2018 JO40_00870 d3f140bbc8472a1df058f6360456d4ed 579 Pfam PF00005 ABC transporter 359 508 3.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00870 d3f140bbc8472a1df058f6360456d4ed 579 Gene3D G3DSA:3.40.50.300 340 579 1.7E-77 T 14-10-2018 JO40_00870 d3f140bbc8472a1df058f6360456d4ed 579 SMART SM00382 368 570 6.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00870 d3f140bbc8472a1df058f6360456d4ed 579 SUPERFAMILY SSF90123 7 328 1.83E-52 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00870 d3f140bbc8472a1df058f6360456d4ed 579 Pfam PF00664 ABC transporter transmembrane region 25 293 7.8E-34 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_00870 d3f140bbc8472a1df058f6360456d4ed 579 Gene3D G3DSA:1.20.1560.10 1 333 2.2E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00870 d3f140bbc8472a1df058f6360456d4ed 579 SUPERFAMILY SSF52540 338 578 6.85E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 Gene3D G3DSA:2.70.98.60 1 305 7.4E-96 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 SUPERFAMILY SSF51445 321 646 8.43E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 26 282 1.2E-72 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 ProSitePatterns PS00512 Alpha-galactosidase signature. 356 371 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PIRSF PIRSF005536 1 707 6.9E-235 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 Gene3D G3DSA:3.20.20.70 307 627 8.0E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 Pfam PF02065 Melibiase 286 630 2.4E-142 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 355 370 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 515 531 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 289 309 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 327 341 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 463 478 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 405 427 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 238 253 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_12170 8a03c07fd6559dcd2db7fb6144f5bdfa 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 540 556 7.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JO40_00210 d4b174ecfb6db019c64c099cadf4248a 305 Pfam PF00005 ABC transporter 20 177 1.2E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00210 d4b174ecfb6db019c64c099cadf4248a 305 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 226 303 2.6E-13 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_00210 d4b174ecfb6db019c64c099cadf4248a 305 SMART SM00382 29 232 3.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00210 d4b174ecfb6db019c64c099cadf4248a 305 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00210 d4b174ecfb6db019c64c099cadf4248a 305 Gene3D G3DSA:3.40.50.300 1 305 1.0E-67 T 14-10-2018 JO40_00210 d4b174ecfb6db019c64c099cadf4248a 305 SUPERFAMILY SSF52540 1 245 1.69E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00210 d4b174ecfb6db019c64c099cadf4248a 305 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 226 284 3.7E-12 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 SMART SM01185 67 121 1.7E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 PIRSF PIRSF005901 1 186 1.0E-66 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP JO40_07875 aac4ff5e0c5990495984008471f2f617 187 SUPERFAMILY SSF50104 1 62 1.93E-15 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO40_07875 aac4ff5e0c5990495984008471f2f617 187 Gene3D G3DSA:2.30.30.30 1 63 1.5E-18 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 3.0E-68 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 60 1.9E-18 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like JO40_07875 aac4ff5e0c5990495984008471f2f617 187 Pfam PF09285 Elongation factor P, C-terminal 133 184 4.9E-21 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 SUPERFAMILY SSF50249 131 185 1.01E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07875 aac4ff5e0c5990495984008471f2f617 187 SUPERFAMILY SSF50249 65 127 5.57E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07875 aac4ff5e0c5990495984008471f2f617 187 SMART SM00841 129 184 2.5E-24 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 Gene3D G3DSA:2.40.50.140 64 127 2.3E-21 T 14-10-2018 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 Gene3D G3DSA:2.40.50.140 129 187 1.4E-21 T 14-10-2018 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 45.497 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JO40_07875 aac4ff5e0c5990495984008471f2f617 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 121 2.4E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JO40_03325 031553450dafa34e1c9c498c95f07ae5 612 Pfam PF08439 Oligopeptidase F 121 193 1.5E-20 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain JO40_03325 031553450dafa34e1c9c498c95f07ae5 612 Gene3D G3DSA:1.10.1370.20 237 612 2.5E-127 T 14-10-2018 JO40_03325 031553450dafa34e1c9c498c95f07ae5 612 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 9 605 4.9E-232 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 JO40_03325 031553450dafa34e1c9c498c95f07ae5 612 Gene3D G3DSA:1.20.140.70 26 189 9.4E-33 T 14-10-2018 JO40_03325 031553450dafa34e1c9c498c95f07ae5 612 Gene3D G3DSA:1.10.287.830 191 235 2.1E-13 T 14-10-2018 JO40_03325 031553450dafa34e1c9c498c95f07ae5 612 Pfam PF01432 Peptidase family M3 213 593 3.1E-67 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JO40_03325 031553450dafa34e1c9c498c95f07ae5 612 SUPERFAMILY SSF55486 4 590 5.62E-103 T 14-10-2018 JO40_00395 f1bc1b03ab77f13cf31bfe713db61bc7 156 SUPERFAMILY SSF47973 7 149 2.09E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JO40_00395 f1bc1b03ab77f13cf31bfe713db61bc7 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.5E-63 T 14-10-2018 IPR023798 Ribosomal protein S7 domain JO40_00395 f1bc1b03ab77f13cf31bfe713db61bc7 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.802 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JO40_00395 f1bc1b03ab77f13cf31bfe713db61bc7 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_00395 f1bc1b03ab77f13cf31bfe713db61bc7 156 PIRSF PIRSF002122 6 156 1.1E-60 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 JO40_00395 f1bc1b03ab77f13cf31bfe713db61bc7 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 4 156 1.3E-68 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JO40_00395 f1bc1b03ab77f13cf31bfe713db61bc7 156 Gene3D G3DSA:1.10.455.10 3 156 3.2E-62 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JO40_06970 748073ecc52e9b8891059962eee14a99 286 SUPERFAMILY SSF88659 186 284 1.29E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_06970 748073ecc52e9b8891059962eee14a99 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 246 272 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 Gene3D G3DSA:1.10.601.10 45 124 7.0E-39 T 14-10-2018 JO40_06970 748073ecc52e9b8891059962eee14a99 286 SUPERFAMILY SSF88946 11 121 2.83E-44 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 Gene3D G3DSA:1.10.10.10 125 202 2.3E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_06970 748073ecc52e9b8891059962eee14a99 286 PIRSF PIRSF000770 2 282 9.8E-40 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 76 89 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 PRINTS PR00046 Major sigma-70 factor signature 246 261 2.7E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 PRINTS PR00046 Major sigma-70 factor signature 100 108 2.7E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 PRINTS PR00046 Major sigma-70 factor signature 225 237 2.7E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 PRINTS PR00046 Major sigma-70 factor signature 76 89 2.7E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 PRINTS PR00046 Major sigma-70 factor signature 261 272 2.7E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 Gene3D G3DSA:1.10.10.10 203 286 1.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_06970 748073ecc52e9b8891059962eee14a99 286 Pfam PF00140 Sigma-70 factor, region 1.2 15 46 3.9E-14 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO40_06970 748073ecc52e9b8891059962eee14a99 286 Pfam PF04539 Sigma-70 region 3 132 208 2.5E-9 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 Pfam PF04542 Sigma-70 region 2 52 120 1.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 SUPERFAMILY SSF88659 125 199 3.97E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_06970 748073ecc52e9b8891059962eee14a99 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 274 3.4E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 Pfam PF04545 Sigma-70, region 4 221 273 7.3E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO40_06970 748073ecc52e9b8891059962eee14a99 286 Gene3D G3DSA:1.20.120.1810 9 44 3.1E-5 T 14-10-2018 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 362 462 5.8E-17 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 181 198 6.0E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 137 6.0E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 208 221 6.0E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 96 336 4.8E-42 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 SUPERFAMILY SSF56601 12 362 1.0E-50 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 SUPERFAMILY SSF69189 397 463 5.89E-7 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 Gene3D G3DSA:2.60.410.10 388 462 1.3E-6 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JO40_07960 3fa2557012c7e7ee56f8926ed7a93278 477 Gene3D G3DSA:3.40.710.10 77 387 3.9E-64 T 14-10-2018 JO40_07120 2cd3103f8316289b763d90c9747c07d4 258 PIRSF PIRSF016184 1 258 7.6E-55 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JO40_07120 2cd3103f8316289b763d90c9747c07d4 258 Gene3D G3DSA:3.10.310.10 116 246 7.6E-91 T 14-10-2018 JO40_07120 2cd3103f8316289b763d90c9747c07d4 258 SUPERFAMILY SSF54506 2 258 4.19E-73 T 14-10-2018 JO40_07120 2cd3103f8316289b763d90c9747c07d4 258 Pfam PF02567 Phenazine biosynthesis-like protein 6 251 1.9E-57 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JO40_07120 2cd3103f8316289b763d90c9747c07d4 258 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 225 2.3E-32 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JO40_07120 2cd3103f8316289b763d90c9747c07d4 258 Gene3D G3DSA:3.10.310.10 4 253 7.6E-91 T 14-10-2018 JO40_10045 23f5ee1a0a08a48945c49321dbc8e3b9 281 TIGRFAM TIGR04424 metallo_McbB: McbB family protein 3 281 3.7E-59 T 14-10-2018 IPR030956 Microcin B17-processing protein McbB JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 SUPERFAMILY SSF52540 3 243 1.41E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 SUPERFAMILY SSF50331 237 360 3.16E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 SMART SM00382 29 212 4.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 Gene3D G3DSA:2.40.50.140 284 345 2.6E-20 T 14-10-2018 JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 Gene3D G3DSA:2.40.50.100 240 357 2.6E-20 T 14-10-2018 JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 Gene3D G3DSA:3.40.50.300 1 239 1.3E-68 T 14-10-2018 JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_04365 7ade0bb1aed046912f3a790cad91674c 361 Pfam PF00005 ABC transporter 21 162 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03665 86d4c6c54e4dd9b1ed1980d86e337ac0 191 Gene3D G3DSA:1.10.530.10 55 188 1.1E-5 T 14-10-2018 JO40_03665 86d4c6c54e4dd9b1ed1980d86e337ac0 191 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 64 186 1.6E-14 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 JO40_06795 6f7f7b05bdb474ce7177234d370ba2f0 179 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 172 7.2E-32 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JO40_06795 6f7f7b05bdb474ce7177234d370ba2f0 179 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 176 18.18 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JO40_06795 6f7f7b05bdb474ce7177234d370ba2f0 179 Gene3D G3DSA:2.30.30.240 99 178 8.6E-11 T 14-10-2018 JO40_06795 6f7f7b05bdb474ce7177234d370ba2f0 179 SUPERFAMILY SSF50447 2 95 7.42E-13 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_06795 6f7f7b05bdb474ce7177234d370ba2f0 179 SUPERFAMILY SSF50346 105 171 5.18E-7 T 14-10-2018 IPR011033 PRC-barrel-like superfamily JO40_06795 6f7f7b05bdb474ce7177234d370ba2f0 179 Gene3D G3DSA:2.40.30.60 3 97 3.8E-16 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 JO40_06795 6f7f7b05bdb474ce7177234d370ba2f0 179 Pfam PF01782 RimM N-terminal domain 6 94 4.7E-19 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 SMART SM00382 363 548 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 Pfam PF00664 ABC transporter transmembrane region 21 290 6.5E-34 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 SUPERFAMILY SSF52540 335 572 4.33E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 Gene3D G3DSA:1.20.1560.10 4 319 3.0E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 Pfam PF00005 ABC transporter 354 501 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 SUPERFAMILY SSF90123 13 317 1.44E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00875 d325156c1e0cc633aa006894a7eb45ef 597 Gene3D G3DSA:3.40.50.300 324 577 2.7E-75 T 14-10-2018 JO40_10845 df41cf2914e67c0819994ee34d2aa8cf 397 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 391 2.3E-121 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 JO40_10845 df41cf2914e67c0819994ee34d2aa8cf 397 Gene3D G3DSA:3.90.1150.10 13 386 5.2E-147 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_10845 df41cf2914e67c0819994ee34d2aa8cf 397 Gene3D G3DSA:3.40.640.10 70 294 5.2E-147 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_10845 df41cf2914e67c0819994ee34d2aa8cf 397 SUPERFAMILY SSF53383 1 392 2.75E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_10845 df41cf2914e67c0819994ee34d2aa8cf 397 Pfam PF00155 Aminotransferase class I and II 32 377 4.4E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO40_08805 fbd378d46e45e44b70493784efba459d 785 Pfam PF00905 Penicillin binding protein transpeptidase domain 320 541 2.2E-10 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO40_08805 fbd378d46e45e44b70493784efba459d 785 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 684 776 1.3E-14 T 14-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_08805 fbd378d46e45e44b70493784efba459d 785 SUPERFAMILY SSF53955 37 275 2.67E-54 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO40_08805 fbd378d46e45e44b70493784efba459d 785 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 779 8.5E-187 T 14-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_08805 fbd378d46e45e44b70493784efba459d 785 Gene3D G3DSA:3.40.710.10 267 631 3.6E-54 T 14-10-2018 JO40_08805 fbd378d46e45e44b70493784efba459d 785 Gene3D G3DSA:1.10.3810.10 56 266 3.1E-46 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_08805 fbd378d46e45e44b70493784efba459d 785 SUPERFAMILY SSF56601 225 627 2.07E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO40_08805 fbd378d46e45e44b70493784efba459d 785 Pfam PF00912 Transglycosylase 65 242 3.5E-41 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_09085 232523296655c8a8b895569118088a7a 258 SMART SM00116 49 98 0.066 T 14-10-2018 IPR000644 CBS domain JO40_09085 232523296655c8a8b895569118088a7a 258 SMART SM00116 111 159 41.0 T 14-10-2018 IPR000644 CBS domain JO40_09085 232523296655c8a8b895569118088a7a 258 SUPERFAMILY SSF56176 171 254 5.18E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO40_09085 232523296655c8a8b895569118088a7a 258 SUPERFAMILY SSF54631 35 175 4.04E-32 T 14-10-2018 JO40_09085 232523296655c8a8b895569118088a7a 258 Pfam PF03471 Transporter associated domain 175 251 2.5E-20 T 14-10-2018 IPR005170 Transporter-associated domain JO40_09085 232523296655c8a8b895569118088a7a 258 Pfam PF00571 CBS domain 113 159 2.0E-4 T 14-10-2018 IPR000644 CBS domain JO40_09085 232523296655c8a8b895569118088a7a 258 Pfam PF00571 CBS domain 40 97 1.3E-5 T 14-10-2018 IPR000644 CBS domain JO40_09085 232523296655c8a8b895569118088a7a 258 Gene3D G3DSA:3.10.580.10 20 168 7.3E-55 T 14-10-2018 JO40_09085 232523296655c8a8b895569118088a7a 258 SMART SM01091 174 253 9.5E-23 T 14-10-2018 IPR005170 Transporter-associated domain JO40_09085 232523296655c8a8b895569118088a7a 258 Gene3D G3DSA:3.30.465.10 169 258 2.8E-20 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO40_13295 f4fef1c28b96c21e68dd1828be03c6b2 308 Pfam PF02108 Flagellar assembly protein FliH 162 289 3.7E-28 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JO40_13035 14dfaade26a8bdb26a516de6af67c030 287 Gene3D G3DSA:2.70.70.10 15 150 2.6E-7 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 SMART SM01264 469 732 5.9E-74 T 14-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 Pfam PF00675 Insulinase (Peptidase family M16) 55 148 4.4E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 Gene3D G3DSA:3.30.830.10 502 984 2.6E-108 T 14-10-2018 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 Gene3D G3DSA:3.30.830.10 251 490 3.4E-57 T 14-10-2018 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 Gene3D G3DSA:3.30.830.10 1 248 1.9E-76 T 14-10-2018 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 Pfam PF05193 Peptidase M16 inactive domain 200 392 8.1E-21 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 Gene3D G3DSA:3.30.830.10 536 811 2.6E-108 T 14-10-2018 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 SUPERFAMILY SSF63411 819 1003 3.83E-26 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 Pfam PF08367 Peptidase M16C associated 471 732 1.2E-49 T 14-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 SUPERFAMILY SSF63411 256 526 1.83E-49 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 SUPERFAMILY SSF63411 528 810 4.15E-50 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_10070 7920c1aa27eeececd99caa7ad22d5c17 1017 SUPERFAMILY SSF63411 4 252 2.2E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_08385 10af60160682bd7b6c3369f7a78b479f 215 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 51 5.4E-17 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 JO40_08385 10af60160682bd7b6c3369f7a78b479f 215 SUPERFAMILY SSF46955 5 59 5.86E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JO40_08385 10af60160682bd7b6c3369f7a78b479f 215 Gene3D G3DSA:3.40.930.10 63 215 1.2E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JO40_08385 10af60160682bd7b6c3369f7a78b479f 215 Pfam PF12728 Helix-turn-helix domain 6 54 1.5E-18 T 14-10-2018 JO40_08385 10af60160682bd7b6c3369f7a78b479f 215 SUPERFAMILY SSF55804 71 214 1.57E-33 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JO40_08385 10af60160682bd7b6c3369f7a78b479f 215 Gene3D G3DSA:1.10.1660.10 2 53 1.1E-9 T 14-10-2018 JO40_08385 10af60160682bd7b6c3369f7a78b479f 215 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 73 213 6.8E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 SUPERFAMILY SSF158472 318 366 1.83E-7 T 14-10-2018 JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 SUPERFAMILY SSF55073 393 583 7.06E-61 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 396 577 6.0E-39 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 SMART SM00044 365 566 4.5E-37 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 Pfam PF00672 HAMP domain 317 362 2.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 Gene3D G3DSA:1.10.8.500 316 367 6.3E-9 T 14-10-2018 JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 Gene3D G3DSA:3.30.450.20 189 293 1.5E-5 T 14-10-2018 JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 Gene3D G3DSA:3.30.70.1230 387 591 1.0E-70 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_09200 0a36012ab7ab8c72fa47f4a9a0e1a2d3 636 SMART SM00304 317 369 2.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_00555 ee4694f5be861481fe2fa71cd4f1c822 400 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 208 227 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JO40_00555 ee4694f5be861481fe2fa71cd4f1c822 400 Gene3D G3DSA:3.40.640.10 27 287 4.0E-147 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_00555 ee4694f5be861481fe2fa71cd4f1c822 400 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 2 397 1.8E-162 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JO40_00555 ee4694f5be861481fe2fa71cd4f1c822 400 Pfam PF00266 Aminotransferase class-V 17 385 1.5E-133 T 14-10-2018 IPR000192 Aminotransferase class V domain JO40_00555 ee4694f5be861481fe2fa71cd4f1c822 400 SUPERFAMILY SSF53383 8 393 1.6E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_00555 ee4694f5be861481fe2fa71cd4f1c822 400 Gene3D G3DSA:3.90.1150.10 3 390 4.0E-147 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_02735 325756f1ee35d43634c0c0f00413832c 611 Gene3D G3DSA:3.40.50.150 174 396 2.2E-34 T 14-10-2018 JO40_02735 325756f1ee35d43634c0c0f00413832c 611 Pfam PF02384 N-6 DNA Methylase 149 341 8.2E-17 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO40_02735 325756f1ee35d43634c0c0f00413832c 611 Pfam PF12950 TaqI-like C-terminal specificity domain 450 556 5.0E-15 T 14-10-2018 IPR025931 TaqI-like C-terminal specificity domain JO40_02735 325756f1ee35d43634c0c0f00413832c 611 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 268 274 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_02735 325756f1ee35d43634c0c0f00413832c 611 SUPERFAMILY SSF53335 80 349 1.1E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_02735 325756f1ee35d43634c0c0f00413832c 611 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 321 2.0E-13 T 14-10-2018 JO40_02735 325756f1ee35d43634c0c0f00413832c 611 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 190 204 2.0E-13 T 14-10-2018 JO40_02735 325756f1ee35d43634c0c0f00413832c 611 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 265 277 2.0E-13 T 14-10-2018 JO40_02735 325756f1ee35d43634c0c0f00413832c 611 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 170 186 2.0E-13 T 14-10-2018 JO40_10625 9f87ae1ab026fc7e2dfcc7e3a2e30971 216 SUPERFAMILY SSF56925 62 216 2.62E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JO40_10625 9f87ae1ab026fc7e2dfcc7e3a2e30971 216 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 208 216 - T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 JO40_00860 4cd94798ba56e402620b10d5bb95a8b7 129 Gene3D G3DSA:1.20.120.160 1 129 1.7E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JO40_00860 4cd94798ba56e402620b10d5bb95a8b7 129 SUPERFAMILY SSF47226 2 113 1.07E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JO40_00860 4cd94798ba56e402620b10d5bb95a8b7 129 Pfam PF01627 Hpt domain 22 92 1.6E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 SUPERFAMILY SSF56235 15 272 1.54E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 Pfam PF00156 Phosphoribosyl transferase domain 304 401 1.1E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 Gene3D G3DSA:3.40.50.2020 290 454 1.3E-151 T 14-10-2018 JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 PIRSF PIRSF000485 11 487 2.4E-192 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 SUPERFAMILY SSF53271 265 479 5.85E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 41 474 3.0E-145 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 Gene3D G3DSA:3.60.20.10 39 475 1.3E-151 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 Pfam PF13537 Glutamine amidotransferase domain 107 228 9.1E-20 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain JO40_08960 da11febfd838aabe2e9e23161b3322d6 487 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 14 473 44.158 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 Pfam PF12950 TaqI-like C-terminal specificity domain 893 1037 3.2E-12 T 14-10-2018 IPR025931 TaqI-like C-terminal specificity domain JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 Pfam PF07669 Eco57I restriction-modification methylase 682 790 1.9E-13 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 685 691 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 SUPERFAMILY SSF116734 984 1098 1.55E-6 T 14-10-2018 JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 SUPERFAMILY SSF53335 242 795 8.56E-61 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 718 742 2.0E-14 T 14-10-2018 JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 487 501 2.0E-14 T 14-10-2018 JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 429 445 2.0E-14 T 14-10-2018 JO40_12355 f53eeeca5c90792b67486dacd8743d2d 1108 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 682 694 2.0E-14 T 14-10-2018 JO40_08425 566d97df0ff5f3e791520c3512ca3439 187 Hamap MF_00239 Cytidylate kinase [cmk]. 14 184 38.842 T 14-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO40_08425 566d97df0ff5f3e791520c3512ca3439 187 TIGRFAM TIGR02173 cyt_kin_arch: putative cytidylate kinase 15 178 1.3E-36 T 14-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO40_08425 566d97df0ff5f3e791520c3512ca3439 187 Gene3D G3DSA:3.40.50.300 5 184 7.8E-36 T 14-10-2018 JO40_08425 566d97df0ff5f3e791520c3512ca3439 187 Pfam PF13189 Cytidylate kinase-like family 79 165 2.2E-10 T 14-10-2018 JO40_08425 566d97df0ff5f3e791520c3512ca3439 187 SUPERFAMILY SSF52540 15 177 2.18E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07515 30afd53bad4622bc35fef7da5809e403 291 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 18 281 9.2E-64 T 14-10-2018 IPR018708 Protein of unknown function DUF2225 JO40_03335 6dca335197aacd347f1a96c991d8a085 335 Pfam PF02661 Fic/DOC family 100 196 1.4E-22 T 14-10-2018 IPR003812 Fido domain JO40_03335 6dca335197aacd347f1a96c991d8a085 335 Pfam PF13412 Winged helix-turn-helix DNA-binding 269 315 1.1E-10 T 14-10-2018 JO40_03335 6dca335197aacd347f1a96c991d8a085 335 SUPERFAMILY SSF46785 269 326 3.38E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_03335 6dca335197aacd347f1a96c991d8a085 335 Gene3D G3DSA:1.10.10.10 266 317 1.1E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_03335 6dca335197aacd347f1a96c991d8a085 335 SUPERFAMILY SSF140931 79 252 2.09E-42 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_03335 6dca335197aacd347f1a96c991d8a085 335 Gene3D G3DSA:1.10.3290.10 12 262 2.2E-55 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_00120 6a4a475bc5094d187748438d132752ee 76 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 2.0E-17 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO40_00120 6a4a475bc5094d187748438d132752ee 76 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 70 18.043 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO40_00120 6a4a475bc5094d187748438d132752ee 76 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 64 4.2E-28 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO40_00120 6a4a475bc5094d187748438d132752ee 76 Gene3D G3DSA:3.30.70.1680 1 62 1.1E-26 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 JO40_00120 6a4a475bc5094d187748438d132752ee 76 Pfam PF02599 Global regulator protein family 1 52 4.0E-25 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO40_00120 6a4a475bc5094d187748438d132752ee 76 SUPERFAMILY SSF117130 1 55 1.83E-19 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 Pfam PF03466 LysR substrate binding domain 87 291 8.6E-35 T 14-10-2018 IPR005119 LysR, substrate-binding JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 Gene3D G3DSA:3.40.190.10 161 267 2.2E-34 T 14-10-2018 JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 Gene3D G3DSA:3.40.190.10 90 290 2.2E-34 T 14-10-2018 JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 SUPERFAMILY SSF46785 1 108 1.1E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 Gene3D G3DSA:1.10.10.10 1 88 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_03905 60faa1e6316919654c9a0cc7f3e78ca3 306 SUPERFAMILY SSF53850 87 292 6.86E-31 T 14-10-2018 JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 Pfam PF02355 Protein export membrane protein 403 567 6.8E-21 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 Gene3D G3DSA:3.30.1360.200 282 393 1.3E-25 T 14-10-2018 JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 Gene3D G3DSA:3.30.70.3400 145 242 5.8E-17 T 14-10-2018 JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 SUPERFAMILY SSF82866 384 568 4.45E-39 T 14-10-2018 JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 582 36.594 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 Gene3D G3DSA:1.20.1640.10 394 569 7.9E-17 T 14-10-2018 JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 332 561 6.0E-78 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO40_07325 eff7d9ba3c2cef5a98a5aa3cf10bf120 593 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 145 567 5.1E-137 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JO40_07205 1da68d3ff3d637a006eebbbf4742e6f7 180 Gene3D G3DSA:3.40.50.360 1 180 2.4E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_07205 1da68d3ff3d637a006eebbbf4742e6f7 180 Pfam PF02525 Flavodoxin-like fold 3 167 4.3E-38 T 14-10-2018 IPR003680 Flavodoxin-like fold JO40_07205 1da68d3ff3d637a006eebbbf4742e6f7 180 SUPERFAMILY SSF52218 1 172 9.54E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_04685 8b68b6c2b93e59cca5fd5a85606ec790 224 Pfam PF06149 Protein of unknown function (DUF969) 3 216 1.6E-84 T 14-10-2018 IPR010374 Protein of unknown function DUF969 JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 Pfam PF00005 ABC transporter 359 506 1.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 Gene3D G3DSA:3.40.50.300 336 580 2.0E-65 T 14-10-2018 JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 Pfam PF00664 ABC transporter transmembrane region 23 296 7.3E-7 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 Gene3D G3DSA:1.20.1560.10 2 326 3.0E-17 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 SMART SM00382 368 550 4.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 SUPERFAMILY SSF90123 15 324 2.35E-21 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06290 6428153d611c1891e769a5cd458cd1d7 581 SUPERFAMILY SSF52540 339 574 3.74E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Gene3D G3DSA:1.10.189.10 360 546 1.7E-66 T 14-10-2018 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 PIRSF PIRSF000853 3 900 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 5 893 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Gene3D G3DSA:1.20.80.30 116 213 1.9E-94 T 14-10-2018 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Gene3D G3DSA:3.50.30.10 398 526 1.7E-66 T 14-10-2018 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 780 798 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 SUPERFAMILY SSF52009 403 529 9.29E-36 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Gene3D G3DSA:3.30.470.20 259 356 1.2E-38 T 14-10-2018 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 467 478 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Pfam PF00391 PEP-utilising enzyme, mobile domain 439 520 3.5E-27 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Gene3D G3DSA:3.20.20.60 549 895 5.3E-145 T 14-10-2018 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 SUPERFAMILY SSF56059 5 388 1.02E-125 T 14-10-2018 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 538 892 7.4E-88 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 SUPERFAMILY SSF51621 530 894 2.61E-118 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 317 8.4E-43 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JO40_11800 ae423d829f3a452331b2999d0e2d5bf9 929 Gene3D G3DSA:3.30.1490.20 16 258 1.9E-94 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO40_11880 ca373f1e69a2cd01cf55a0490874a92a 247 SUPERFAMILY SSF75625 3 241 1.07E-97 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO40_11880 ca373f1e69a2cd01cf55a0490874a92a 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.621 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO40_11880 ca373f1e69a2cd01cf55a0490874a92a 247 Gene3D G3DSA:3.30.70.980 134 203 5.1E-55 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO40_11880 ca373f1e69a2cd01cf55a0490874a92a 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 2.8E-107 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO40_11880 ca373f1e69a2cd01cf55a0490874a92a 247 Gene3D G3DSA:3.30.70.980 86 236 5.1E-55 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO40_11880 ca373f1e69a2cd01cf55a0490874a92a 247 Pfam PF01709 Transcriptional regulator 5 237 2.0E-99 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO40_11880 ca373f1e69a2cd01cf55a0490874a92a 247 Gene3D G3DSA:1.10.10.200 1 79 8.9E-37 T 14-10-2018 IPR017856 Integrase-like, N-terminal JO40_07150 efa5aec245f285feaadcddab2b90b7bd 204 Gene3D G3DSA:3.40.50.360 18 204 7.2E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_07150 efa5aec245f285feaadcddab2b90b7bd 204 SUPERFAMILY SSF52218 56 160 1.27E-15 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_07150 efa5aec245f285feaadcddab2b90b7bd 204 Pfam PF12682 Flavodoxin 58 200 3.1E-19 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JO40_06335 164051f9c4974d9766961b81cbc45fa1 163 SUPERFAMILY SSF55804 13 159 3.92E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JO40_06335 164051f9c4974d9766961b81cbc45fa1 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 17 159 1.7E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JO40_06335 164051f9c4974d9766961b81cbc45fa1 163 Gene3D G3DSA:3.40.930.10 7 163 2.5E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JO40_05310 a70b3379df034ed7f88d4e37771a75fd 531 SMART SM00382 351 530 1.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05310 a70b3379df034ed7f88d4e37771a75fd 531 Pfam PF00005 ABC transporter 346 479 7.3E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05310 a70b3379df034ed7f88d4e37771a75fd 531 Gene3D G3DSA:3.40.50.300 316 531 4.1E-33 T 14-10-2018 JO40_05310 a70b3379df034ed7f88d4e37771a75fd 531 Gene3D G3DSA:1.20.1560.10 5 315 9.9E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05310 a70b3379df034ed7f88d4e37771a75fd 531 Pfam PF00664 ABC transporter transmembrane region 18 283 7.5E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_05310 a70b3379df034ed7f88d4e37771a75fd 531 SUPERFAMILY SSF90123 8 315 7.06E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05310 a70b3379df034ed7f88d4e37771a75fd 531 SUPERFAMILY SSF52540 327 527 1.49E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 SUPERFAMILY SSF55681 392 582 6.46E-38 T 14-10-2018 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 SMART SM00873 122 282 4.7E-4 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 Gene3D G3DSA:3.30.56.10 309 374 7.9E-14 T 14-10-2018 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 Hamap MF_00284 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 579 29.996 T 14-10-2018 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 Gene3D G3DSA:3.50.40.10 91 298 1.6E-51 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 SUPERFAMILY SSF46955 312 372 1.19E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 Pfam PF03484 tRNA synthetase B5 domain 313 372 1.4E-10 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 TIGRFAM TIGR00471 pheT_arch: phenylalanine--tRNA ligase, beta subunit 1 582 2.5E-152 T 14-10-2018 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 Gene3D G3DSA:3.30.56.10 1 90 1.1E-19 T 14-10-2018 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 Gene3D G3DSA:3.30.930.10 393 582 3.0E-39 T 14-10-2018 JO40_13025 0ee25c5b50e965f3dac45b48d08765e5 586 SMART SM00874 308 376 1.4E-9 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO40_02045 d9d55f5eed7308903ce0356062f45f32 399 SUPERFAMILY SSF101898 61 222 2.88E-5 T 14-10-2018 JO40_02045 d9d55f5eed7308903ce0356062f45f32 399 Gene3D G3DSA:2.120.10.30 97 232 1.9E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JO40_06700 868423701a91f1fb54711330861b7c96 159 Pfam PF00075 RNase H 3 155 2.4E-45 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 JO40_06700 868423701a91f1fb54711330861b7c96 159 Gene3D G3DSA:3.30.420.10 1 159 4.7E-55 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO40_06700 868423701a91f1fb54711330861b7c96 159 SUPERFAMILY SSF53098 3 157 1.52E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO40_06700 868423701a91f1fb54711330861b7c96 159 Hamap MF_00042 Ribonuclease H [rnhA]. 1 159 28.839 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:3.90.1110.10 273 396 4.5E-24 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:3.90.1800.10 1053 1136 2.0E-9 T 14-10-2018 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Pfam PF00562 RNA polymerase Rpb2, domain 6 676 1065 6.1E-155 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Pfam PF04561 RNA polymerase Rpb2, domain 2 313 412 1.0E-15 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Pfam PF04565 RNA polymerase Rpb2, domain 3 471 539 2.0E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:2.40.50.150 782 926 3.9E-57 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:3.90.1100.10 397 580 4.5E-62 T 14-10-2018 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:3.90.1100.10 603 671 1.1E-20 T 14-10-2018 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:3.90.1100.10 17 153 1.5E-47 T 14-10-2018 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:3.90.1110.10 154 272 3.2E-20 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 11 1143 12.01 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 11 892 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 8.2E-24 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:2.40.50.100 672 750 5.7E-28 T 14-10-2018 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Pfam PF10385 RNA polymerase beta subunit external 1 domain 549 614 1.2E-17 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Pfam PF04563 RNA polymerase beta subunit 25 456 3.0E-27 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 SUPERFAMILY SSF64484 17 1148 0.0 T 14-10-2018 JO40_00755 ae6beed67a5f70b200b7fa5bd76c253b 1167 Gene3D G3DSA:2.40.270.10 977 1043 1.9E-17 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_04640 89593d2d0560b3b73fc4063833fdeb78 186 Pfam PF02661 Fic/DOC family 30 115 7.4E-13 T 14-10-2018 IPR003812 Fido domain JO40_04640 89593d2d0560b3b73fc4063833fdeb78 186 SUPERFAMILY SSF140931 5 176 3.66E-39 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_04640 89593d2d0560b3b73fc4063833fdeb78 186 Gene3D G3DSA:1.10.3290.10 1 181 5.8E-65 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_00660 e711474ccc2e3e53a4716a243c130eba 398 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 4.2E-29 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 JO40_00660 e711474ccc2e3e53a4716a243c130eba 398 Pfam PF02601 Exonuclease VII, large subunit 122 391 3.7E-76 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 JO40_00660 e711474ccc2e3e53a4716a243c130eba 398 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 394 26.294 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JO40_00660 e711474ccc2e3e53a4716a243c130eba 398 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 394 7.3E-136 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JO40_13220 325206885820e17bc2c0804421573072 236 Gene3D G3DSA:3.30.1370.50 170 235 3.8E-22 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 JO40_13220 325206885820e17bc2c0804421573072 236 Pfam PF01424 R3H domain 174 232 2.1E-12 T 14-10-2018 IPR001374 R3H domain GO:0003676 JO40_13220 325206885820e17bc2c0804421573072 236 SMART SM01245 4 53 4.6E-11 T 14-10-2018 IPR032782 Jag, N-terminal JO40_13220 325206885820e17bc2c0804421573072 236 Pfam PF14804 Jag N-terminus 5 52 7.7E-11 T 14-10-2018 IPR032782 Jag, N-terminal JO40_13220 325206885820e17bc2c0804421573072 236 SUPERFAMILY SSF82708 189 233 9.02E-6 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 JO40_13220 325206885820e17bc2c0804421573072 236 SMART SM00393 155 234 4.5E-23 T 14-10-2018 IPR001374 R3H domain GO:0003676 JO40_13220 325206885820e17bc2c0804421573072 236 Gene3D G3DSA:3.30.300.20 87 169 5.0E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_13220 325206885820e17bc2c0804421573072 236 Pfam PF13083 KH domain 96 160 2.4E-8 T 14-10-2018 JO40_05550 619a8032f45846561b10f7c4a824d6ce 232 Pfam PF02361 Cobalt transport protein 5 195 2.7E-14 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Gene3D G3DSA:1.10.150.20 175 247 3.1E-88 T 14-10-2018 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Pfam PF00476 DNA polymerase family A 567 941 5.3E-154 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 171 1.2E-47 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SUPERFAMILY SSF47807 172 283 2.24E-27 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SUPERFAMILY SSF56672 539 943 6.56E-150 T 14-10-2018 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SUPERFAMILY SSF88723 2 171 3.92E-46 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Gene3D G3DSA:3.40.50.1010 6 273 3.1E-88 T 14-10-2018 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Gene3D G3DSA:3.30.70.370 679 939 1.9E-109 T 14-10-2018 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 670 692 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 745 758 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 708 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 738 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 876 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 890 903 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 828 839 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 794 2.1E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Gene3D G3DSA:1.20.1060.10 560 673 2.1E-39 T 14-10-2018 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Pfam PF01612 3'-5' exonuclease 347 534 2.2E-28 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SMART SM00475 1 262 1.0E-110 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Gene3D G3DSA:3.30.420.10 343 558 5.5E-56 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SMART SM00482 701 907 3.2E-108 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 265 1.1E-27 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SMART SM00474 346 535 2.0E-20 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 Gene3D G3DSA:1.10.150.20 724 867 1.9E-109 T 14-10-2018 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SMART SM00279 174 209 1.0E-11 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 ProSitePatterns PS00447 DNA polymerase family A signature. 769 788 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 TIGRFAM TIGR00593 pola: DNA polymerase I 6 943 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_11500 6b9a26a4824f4a9eb822adfd331d5c9a 943 SUPERFAMILY SSF53098 342 536 5.43E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 PRINTS PR00762 Chloride channel signature 391 410 1.0E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 PRINTS PR00762 Chloride channel signature 338 358 1.0E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 PRINTS PR00762 Chloride channel signature 175 194 1.0E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 PRINTS PR00762 Chloride channel signature 95 112 1.0E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 SUPERFAMILY SSF81340 15 436 2.75E-90 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 SUPERFAMILY SSF116726 452 520 4.45E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 Pfam PF02080 TrkA-C domain 458 514 2.6E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 Gene3D G3DSA:3.30.70.1450 455 521 1.2E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 Gene3D G3DSA:1.10.3080.10 20 454 2.8E-86 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 JO40_01370 1143e9e7a877086ec4743b794c617d7c 533 Pfam PF00654 Voltage gated chloride channel 83 423 4.6E-76 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 Pfam PF00013 KH domain 202 253 1.2E-7 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 Gene3D G3DSA:1.10.3210.10 314 483 3.8E-19 T 14-10-2018 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 9 509 7.5E-219 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 SMART SM00322 197 264 4.1E-9 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 Pfam PF12072 Domain of unknown function (DUF3552) 3 193 1.4E-46 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 SMART SM00471 321 427 4.8E-14 T 14-10-2018 IPR003607 HD/PDEase domain JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 Gene3D G3DSA:3.30.1370.10 194 291 4.1E-9 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 SUPERFAMILY SSF54791 201 292 1.59E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 TIGRFAM TIGR00277 HDIG: HDIG domain 321 398 3.0E-24 T 14-10-2018 IPR006675 HDIG domain JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 SUPERFAMILY SSF109604 307 459 8.3E-31 T 14-10-2018 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 Hamap MF_00335 Ribonuclease Y [rny]. 5 509 23.888 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 JO40_04385 079b17803e0f69e9da6a9cf596fb45da 509 Pfam PF01966 HD domain 325 417 6.9E-21 T 14-10-2018 IPR006674 HD domain JO40_01245 01afa48174103222e7a9f6b3d4758cf8 106 SUPERFAMILY SSF81301 3 104 1.41E-15 T 14-10-2018 JO40_01245 01afa48174103222e7a9f6b3d4758cf8 106 Gene3D G3DSA:3.30.460.10 1 106 7.7E-17 T 14-10-2018 JO40_01245 01afa48174103222e7a9f6b3d4758cf8 106 Pfam PF01909 Nucleotidyltransferase domain 7 54 1.5E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 377 3.7E-30 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 Gene3D G3DSA:2.70.98.90 76 339 9.7E-12 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 3 580 16.373 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 Pfam PF02096 60Kd inner membrane protein 380 578 8.6E-57 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 PRINTS PR01900 YidC translocation/secretion protein signature 365 381 5.3E-9 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 PRINTS PR01900 YidC translocation/secretion protein signature 533 557 5.3E-9 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 PRINTS PR01900 YidC translocation/secretion protein signature 510 525 5.3E-9 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 Pfam PF14849 YidC periplasmic domain 80 339 1.0E-17 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 PRINTS PR00701 60kDa inner membrane protein signature 264 279 5.3E-12 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 PRINTS PR00701 60kDa inner membrane protein signature 175 195 5.3E-12 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 PRINTS PR00701 60kDa inner membrane protein signature 441 464 5.3E-12 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 PRINTS PR00701 60kDa inner membrane protein signature 85 106 5.3E-12 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_13225 7dc95cb4fe262201edcd434a96f83fa8 584 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 379 578 2.4E-61 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Gene3D G3DSA:3.30.420.340 430 594 4.3E-52 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Gene3D G3DSA:1.10.150.20 595 656 1.1E-7 T 14-10-2018 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 362 1.7E-111 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Pfam PF02151 UvrB/uvrC motif 208 235 2.7E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 437 586 1.5E-48 T 14-10-2018 IPR001162 UvrC family homology region JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 SUPERFAMILY SSF46600 190 235 6.54E-11 T 14-10-2018 IPR036876 UVR domain superfamily JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 SUPERFAMILY SSF47781 564 651 9.21E-13 T 14-10-2018 IPR010994 RuvA domain 2-like JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Pfam PF12826 Helix-hairpin-helix motif 605 650 1.5E-6 T 14-10-2018 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 SUPERFAMILY SSF82771 20 102 4.71E-22 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 SMART SM00465 20 100 6.5E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Hamap MF_00203 UvrABC system protein C [uvrC]. 7 652 26.978 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Gene3D G3DSA:3.40.1440.10 5 104 5.1E-33 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JO40_07440 ac4c5a1af04267219b7f811561aa9d2c 659 Pfam PF01541 GIY-YIG catalytic domain 21 95 5.1E-11 T 14-10-2018 IPR000305 GIY-YIG endonuclease JO40_07340 77c9e55f902dcafdf8d537aaf209986c 131 SUPERFAMILY SSF50249 3 113 1.92E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07340 77c9e55f902dcafdf8d537aaf209986c 131 Gene3D G3DSA:2.40.50.140 1 124 1.4E-30 T 14-10-2018 JO40_07340 77c9e55f902dcafdf8d537aaf209986c 131 PIRSF PIRSF002070 1 127 4.0E-27 T 14-10-2018 JO40_07340 77c9e55f902dcafdf8d537aaf209986c 131 Pfam PF00436 Single-strand binding protein family 4 105 5.5E-25 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JO40_07340 77c9e55f902dcafdf8d537aaf209986c 131 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 116 6.4E-24 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO40_07340 77c9e55f902dcafdf8d537aaf209986c 131 Hamap MF_00984 Single-stranded DNA-binding protein. 4 110 23.306 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO40_12275 80c8617775ab1e6e0f9d18b496ffd414 287 Pfam PF04085 rod shape-determining protein MreC 123 278 1.8E-36 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JO40_12275 80c8617775ab1e6e0f9d18b496ffd414 287 Gene3D G3DSA:2.40.10.350 184 266 8.5E-37 T 14-10-2018 JO40_12275 80c8617775ab1e6e0f9d18b496ffd414 287 Gene3D G3DSA:2.40.10.340 121 277 8.5E-37 T 14-10-2018 JO40_12275 80c8617775ab1e6e0f9d18b496ffd414 287 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 7 280 5.8E-43 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JO40_12275 80c8617775ab1e6e0f9d18b496ffd414 287 PIRSF PIRSF038471 1 287 8.4E-44 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JO40_04195 9d6dee9fc11dd03ac267c042d43960eb 589 SUPERFAMILY SSF54292 4 90 9.41E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JO40_04195 9d6dee9fc11dd03ac267c042d43960eb 589 Gene3D G3DSA:3.10.20.30 5 91 1.0E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO40_04195 9d6dee9fc11dd03ac267c042d43960eb 589 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 78 6.6E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JO40_04195 9d6dee9fc11dd03ac267c042d43960eb 589 Pfam PF14574 Domain of unknown function (DUF4445) 175 583 3.9E-124 T 14-10-2018 IPR027980 Protein of unknown function DUF4445 JO40_04195 9d6dee9fc11dd03ac267c042d43960eb 589 Gene3D G3DSA:3.30.420.480 173 353 1.8E-49 T 14-10-2018 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Gene3D G3DSA:3.30.70.240 595 666 2.0E-84 T 14-10-2018 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 SUPERFAMILY SSF54980 396 472 2.12E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Gene3D G3DSA:3.40.50.300 3 279 2.6E-74 T 14-10-2018 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 SUPERFAMILY SSF50447 258 389 7.07E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 SUPERFAMILY SSF54980 594 684 6.71E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 SUPERFAMILY SSF52540 5 275 1.79E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Pfam PF00679 Elongation factor G C-terminus 591 678 4.5E-27 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Gene3D G3DSA:3.30.230.10 475 679 2.0E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Gene3D G3DSA:3.30.70.870 402 474 2.5E-16 T 14-10-2018 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Pfam PF00009 Elongation factor Tu GTP binding domain 7 275 2.9E-41 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 SMART SM00838 591 679 7.3E-27 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 SMART SM00889 471 589 2.3E-65 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Gene3D G3DSA:2.40.30.10 281 401 4.2E-34 T 14-10-2018 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 171 9.0E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Pfam PF14492 Elongation Factor G, domain II 396 467 1.7E-20 T 14-10-2018 JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 SUPERFAMILY SSF54211 470 590 3.03E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_07005 0ee0ad40bf014d5b6b0afec2fe891adb 692 Pfam PF03764 Elongation factor G, domain IV 470 588 5.6E-43 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Gene3D G3DSA:3.40.50.300 347 471 6.8E-29 T 14-10-2018 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 SMART SM01086 718 809 1.8E-29 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_12805 906d444854a3a6d11995f1ec0923a953 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 665 8.8E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 589 607 8.8E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 544 562 8.8E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 618 636 8.8E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 323 1.4E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Gene3D G3DSA:3.40.50.300 472 717 7.4E-89 T 14-10-2018 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 SUPERFAMILY SSF81923 17 137 4.45E-17 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 SUPERFAMILY SSF52540 489 795 2.15E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Gene3D G3DSA:1.10.8.60 718 822 6.0E-26 T 14-10-2018 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 SUPERFAMILY SSF52540 168 474 8.74E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Pfam PF02151 UvrB/uvrC motif 420 453 4.7E-5 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 144 2.9E-9 T 14-10-2018 IPR004176 Clp, N-terminal JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 66 3.7E-6 T 14-10-2018 IPR004176 Clp, N-terminal JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Pfam PF07724 AAA domain (Cdc48 subfamily) 539 711 4.5E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Gene3D G3DSA:3.40.50.300 152 346 4.7E-68 T 14-10-2018 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 SMART SM00382 203 346 2.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12805 906d444854a3a6d11995f1ec0923a953 832 SMART SM00382 540 701 3.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12805 906d444854a3a6d11995f1ec0923a953 832 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 298 310 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 718 796 1.5E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_12805 906d444854a3a6d11995f1ec0923a953 832 Gene3D G3DSA:1.10.1780.10 1 151 3.0E-23 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 SUPERFAMILY SSF48024 10 121 1.31E-33 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 1.1E-31 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 Pfam PF03796 DnaB-like helicase C terminal domain 187 440 1.4E-88 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 12 441 1.1E-145 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 Gene3D G3DSA:3.40.50.300 170 445 1.5E-90 T 14-10-2018 JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 SUPERFAMILY SSF52540 186 434 2.0E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 SMART SM00382 204 400 7.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_10875 e0bfa15e0a5be2b6b7a668f97db2a41f 446 Gene3D G3DSA:1.10.860.10 4 168 8.2E-50 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 SUPERFAMILY SSF55920 298 549 4.58E-51 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 Pfam PF00557 Metallopeptidase family M24 307 517 7.6E-45 T 14-10-2018 IPR000994 Peptidase M24 JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 136 4.1E-23 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 Gene3D G3DSA:3.90.230.10 296 585 3.6E-94 T 14-10-2018 JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 Gene3D G3DSA:3.40.350.10 146 295 9.0E-38 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 Pfam PF16189 Creatinase/Prolidase N-terminal domain 147 301 4.7E-43 T 14-10-2018 JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 Gene3D G3DSA:3.40.350.10 1 145 2.0E-50 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 SUPERFAMILY SSF53092 5 145 1.34E-16 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JO40_11905 ff8e51176c3e7a887f5f5e7c8fb31af3 585 Pfam PF16188 C-terminal region of peptidase_M24 525 585 4.0E-20 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 SUPERFAMILY SSF56712 22 604 5.89E-187 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 SMART SM00437 261 525 3.0E-109 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Hamap MF_00952 DNA topoisomerase 1 [topA]. 21 657 53.2 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Gene3D G3DSA:3.40.50.140 15 153 2.4E-50 T 14-10-2018 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 4.3E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 311 320 4.3E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 95 108 4.3E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 4.3E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 181 199 4.3E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 23 627 2.0E-247 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 631 670 1.4E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 593 628 1.7E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 674 706 4.1E-6 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Pfam PF01751 Toprim domain 23 132 2.3E-27 T 14-10-2018 IPR006171 TOPRIM domain JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Gene3D G3DSA:3.30.65.10 579 634 4.7E-15 T 14-10-2018 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 298 320 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Gene3D G3DSA:2.70.20.10 203 472 1.6E-152 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 SMART SM00436 123 211 8.2E-53 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Gene3D G3DSA:1.10.290.10 269 402 1.6E-152 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Pfam PF01131 DNA topoisomerase 147 562 2.4E-127 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 Gene3D G3DSA:1.10.460.10 154 565 1.6E-152 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 SUPERFAMILY SSF57783 584 629 6.04E-14 T 14-10-2018 JO40_13340 32cb56c59a6dfa511e5fc3a761eb7b16 721 SMART SM00493 21 121 7.1E-28 T 14-10-2018 IPR006171 TOPRIM domain JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 Hamap MF_00017 Recombination protein RecR [recR]. 1 195 92.013 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 Pfam PF13662 Toprim domain 78 168 1.4E-19 T 14-10-2018 IPR006171 TOPRIM domain JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 Pfam PF02132 RecR protein 36 75 5.9E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 Gene3D G3DSA:1.10.8.420 1 49 1.9E-16 T 14-10-2018 JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 ProSitePatterns PS01300 RecR protein signature. 54 75 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 SMART SM00493 77 162 5.5E-10 T 14-10-2018 IPR006171 TOPRIM domain JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 SUPERFAMILY SSF111304 2 195 7.32E-71 T 14-10-2018 IPR023627 Recombination protein RecR JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 TIGRFAM TIGR00615 recR: recombination protein RecR 2 192 8.0E-78 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JO40_11250 a9ea6c3e0ded637c296ae4d7f9fccf97 195 Gene3D G3DSA:3.40.1360.10 74 194 2.6E-43 T 14-10-2018 JO40_03440 b61aae86d767eb0e2b818aa2df2cd3ae 251 SUPERFAMILY SSF53800 2 246 3.4E-67 T 14-10-2018 JO40_03440 b61aae86d767eb0e2b818aa2df2cd3ae 251 Pfam PF06180 Cobalt chelatase (CbiK) 3 246 6.6E-76 T 14-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 JO40_03440 b61aae86d767eb0e2b818aa2df2cd3ae 251 PIRSF PIRSF033579 1 250 4.9E-82 T 14-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 JO40_03440 b61aae86d767eb0e2b818aa2df2cd3ae 251 Gene3D G3DSA:3.40.50.1400 105 226 1.8E-82 T 14-10-2018 JO40_03440 b61aae86d767eb0e2b818aa2df2cd3ae 251 Gene3D G3DSA:3.40.50.1400 3 243 1.8E-82 T 14-10-2018 JO40_09175 af0b827d96c460a22d5ba060d22b9b00 251 Pfam PF01553 Acyltransferase 69 185 5.1E-15 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO40_09175 af0b827d96c460a22d5ba060d22b9b00 251 SMART SM00563 74 193 2.7E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO40_09175 af0b827d96c460a22d5ba060d22b9b00 251 SUPERFAMILY SSF69593 56 226 1.96E-20 T 14-10-2018 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Gene3D G3DSA:3.30.300.20 281 460 8.6E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 SUPERFAMILY SSF54814 204 281 5.36E-27 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Gene3D G3DSA:3.30.1480.10 1 121 1.2E-23 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 443 25.221 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 SUPERFAMILY SSF50249 128 202 2.86E-8 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Gene3D G3DSA:2.40.50.140 131 201 1.2E-11 T 14-10-2018 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Pfam PF13184 NusA-like KH domain 233 301 4.2E-26 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 SUPERFAMILY SSF69705 1 121 8.89E-26 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Gene3D G3DSA:3.30.300.20 202 280 1.2E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Pfam PF13248 zinc-ribbon domain 462 486 1.8E-8 T 14-10-2018 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 SUPERFAMILY SSF54814 282 346 1.77E-13 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 Pfam PF08529 NusA N-terminal domain 5 120 3.9E-23 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JO40_08640 1ebb8ab9fc4cb2c12eafff1e06eaa7bb 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 3.2E-111 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 JO40_07935 dc320ec5ec16ef28001961318fa04b7e 264 Pfam PF04536 TPM domain 35 159 4.8E-37 T 14-10-2018 IPR007621 TPM domain JO40_07935 dc320ec5ec16ef28001961318fa04b7e 264 Gene3D G3DSA:3.10.310.50 25 167 5.9E-45 T 14-10-2018 JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Pfam PF02769 AIR synthase related protein, C-terminal domain 423 574 2.9E-21 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Pfam PF02769 AIR synthase related protein, C-terminal domain 805 947 3.9E-13 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 SUPERFAMILY SSF56042 802 943 5.23E-24 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 SUPERFAMILY SSF55326 611 798 1.16E-47 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Gene3D G3DSA:3.90.650.10 415 591 2.1E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 106 948 185.484 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 SUPERFAMILY SSF56042 421 643 8.97E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 87 154 5.0E-10 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 SUPERFAMILY SSF82697 87 155 1.05E-9 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 SUPERFAMILY SSF55326 202 419 4.71E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 277 943 1.1E-166 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Gene3D G3DSA:3.30.1330.10 228 414 8.7E-55 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Gene3D G3DSA:3.30.1280.10 85 158 1.3E-9 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Pfam PF00586 AIR synthase related protein, N-terminal domain 666 792 2.1E-9 T 14-10-2018 IPR016188 PurM-like, N-terminal domain JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Pfam PF00586 AIR synthase related protein, N-terminal domain 290 411 2.5E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Gene3D G3DSA:3.30.1330.10 611 794 3.2E-46 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 Gene3D G3DSA:3.90.650.10 800 948 1.6E-26 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_12895 4a384e1a4e961655fcbe3b0e09c16137 948 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 91 154 0.001 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 Pfam PF03129 Anticodon binding domain 360 444 4.6E-5 T 14-10-2018 IPR004154 Anticodon-binding JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 SUPERFAMILY SSF52954 347 443 1.53E-8 T 14-10-2018 JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 SUPERFAMILY SSF55681 8 339 3.78E-79 T 14-10-2018 JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 9 435 3.0E-125 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 PIRSF PIRSF001549 3 446 3.2E-130 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 5 445 27.109 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 Pfam PF13393 Histidyl-tRNA synthetase 12 330 3.0E-52 T 14-10-2018 JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 Gene3D G3DSA:3.40.50.800 345 446 6.6E-17 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO40_09980 600b46500bf64a848c01d1e50142f4ca 448 Gene3D G3DSA:3.30.930.10 2 344 7.6E-107 T 14-10-2018 JO40_02145 e5e9771446a4f4cca022bf99e8c10049 208 Gene3D G3DSA:3.40.50.150 28 205 1.8E-33 T 14-10-2018 JO40_02145 e5e9771446a4f4cca022bf99e8c10049 208 Pfam PF13847 Methyltransferase domain 48 177 1.8E-17 T 14-10-2018 IPR025714 Methyltransferase domain JO40_02145 e5e9771446a4f4cca022bf99e8c10049 208 SUPERFAMILY SSF53335 6 166 2.34E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_12210 c10243a4b52b4ee90103952e1ee335ac 500 Gene3D G3DSA:3.40.190.10 2 457 7.8E-91 T 14-10-2018 JO40_12210 c10243a4b52b4ee90103952e1ee335ac 500 Gene3D G3DSA:3.10.105.10 249 452 7.8E-91 T 14-10-2018 JO40_12210 c10243a4b52b4ee90103952e1ee335ac 500 SUPERFAMILY SSF53850 2 478 4.5E-81 T 14-10-2018 JO40_12210 c10243a4b52b4ee90103952e1ee335ac 500 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 33 401 8.5E-55 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_12210 c10243a4b52b4ee90103952e1ee335ac 500 PIRSF PIRSF002741 1 476 1.0E-57 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO40_12210 c10243a4b52b4ee90103952e1ee335ac 500 Gene3D G3DSA:3.90.76.10 21 144 7.8E-91 T 14-10-2018 JO40_09160 bd3a620cd9fab2d9c122a390a0578a0f 435 SUPERFAMILY SSF103088 323 433 8.89E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_09160 bd3a620cd9fab2d9c122a390a0578a0f 435 Pfam PF00691 OmpA family 333 427 1.2E-20 T 14-10-2018 IPR006665 OmpA-like domain JO40_09160 bd3a620cd9fab2d9c122a390a0578a0f 435 Gene3D G3DSA:3.30.1330.60 297 435 1.0E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_02570 1b61c56e69eb14c14c6ec4d0d01890ff 265 Gene3D G3DSA:3.30.1380.10 48 256 4.6E-55 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JO40_02570 1b61c56e69eb14c14c6ec4d0d01890ff 265 SUPERFAMILY SSF55166 99 242 4.19E-32 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JO40_02570 1b61c56e69eb14c14c6ec4d0d01890ff 265 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 112 234 2.9E-37 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 JO40_01970 a4e7a68e1d278be87703f089c245fcf8 220 Gene3D G3DSA:3.40.50.410 24 206 3.1E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_01970 a4e7a68e1d278be87703f089c245fcf8 220 Pfam PF13519 von Willebrand factor type A domain 31 139 7.9E-14 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_01970 a4e7a68e1d278be87703f089c245fcf8 220 SUPERFAMILY SSF53300 26 149 5.24E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_01970 a4e7a68e1d278be87703f089c245fcf8 220 SMART SM00327 28 212 1.8E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 158 39.043 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 SUPERFAMILY SSF53155 1 82 9.22E-15 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 Gene3D G3DSA:1.10.10.10 77 162 1.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 71 3.9E-5 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 1.1E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 SUPERFAMILY SSF46767 77 158 6.41E-31 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 Gene3D G3DSA:3.30.160.70 1 73 4.7E-11 T 14-10-2018 JO40_04535 a19c53a9648205bebf07c81ff13f9a13 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 4.4E-35 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JO40_02035 776b4b204ef680889f608e90cdd83f4a 189 SMART SM00448 69 184 3.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_02035 776b4b204ef680889f608e90cdd83f4a 189 Pfam PF12728 Helix-turn-helix domain 2 51 1.3E-8 T 14-10-2018 JO40_02035 776b4b204ef680889f608e90cdd83f4a 189 Gene3D G3DSA:1.10.1660.10 3 56 2.9E-5 T 14-10-2018 JO40_02035 776b4b204ef680889f608e90cdd83f4a 189 SUPERFAMILY SSF52172 70 188 5.69E-24 T 14-10-2018 IPR011006 CheY-like superfamily JO40_02035 776b4b204ef680889f608e90cdd83f4a 189 Gene3D G3DSA:3.40.50.2300 66 189 4.1E-23 T 14-10-2018 JO40_02035 776b4b204ef680889f608e90cdd83f4a 189 Pfam PF00072 Response regulator receiver domain 71 184 3.5E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_06750 542dd42c3e4ff9f67164a4d8c5e98a0b 594 Pfam PF00664 ABC transporter transmembrane region 18 286 1.4E-22 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_06750 542dd42c3e4ff9f67164a4d8c5e98a0b 594 Gene3D G3DSA:1.20.1560.10 2 320 3.6E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06750 542dd42c3e4ff9f67164a4d8c5e98a0b 594 SMART SM00382 367 559 1.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06750 542dd42c3e4ff9f67164a4d8c5e98a0b 594 SUPERFAMILY SSF90123 4 316 1.28E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06750 542dd42c3e4ff9f67164a4d8c5e98a0b 594 Gene3D G3DSA:3.40.50.300 332 591 1.4E-67 T 14-10-2018 JO40_06750 542dd42c3e4ff9f67164a4d8c5e98a0b 594 Pfam PF00005 ABC transporter 358 512 5.9E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06750 542dd42c3e4ff9f67164a4d8c5e98a0b 594 SUPERFAMILY SSF52540 335 583 5.72E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00800 b0da401e967c4ac402bab9b780c5404e 56 Pfam PF00471 Ribosomal protein L33 9 54 2.2E-21 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00800 b0da401e967c4ac402bab9b780c5404e 56 SUPERFAMILY SSF57829 3 54 3.41E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JO40_00800 b0da401e967c4ac402bab9b780c5404e 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00800 b0da401e967c4ac402bab9b780c5404e 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 17.349 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00800 b0da401e967c4ac402bab9b780c5404e 56 Gene3D G3DSA:2.20.28.120 1 55 4.5E-22 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00800 b0da401e967c4ac402bab9b780c5404e 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 3.7E-26 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 Pfam PF01706 FliG C-terminal domain 233 340 2.4E-43 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 6.7E-85 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 6.7E-85 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 6.7E-85 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 288 314 6.7E-85 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 211 236 6.7E-85 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 242 262 6.7E-85 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 264 284 6.7E-85 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 Gene3D G3DSA:1.10.220.30 119 210 7.3E-35 T 14-10-2018 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 PIRSF PIRSF003161 15 349 3.0E-119 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 Pfam PF14841 FliG middle domain 131 205 1.4E-31 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 Gene3D G3DSA:1.10.220.30 211 349 2.7E-50 T 14-10-2018 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 Gene3D G3DSA:1.10.220.30 15 117 1.5E-18 T 14-10-2018 JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 SUPERFAMILY SSF48029 130 341 4.45E-70 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 Pfam PF14842 FliG N-terminal domain 21 123 1.0E-33 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 SUPERFAMILY SSF48029 21 130 2.17E-21 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO40_13300 9aa89a7f7e1eccce476423426f2a1cf4 349 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 16 347 2.8E-140 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_02260 542c66b91bd01725a689e09df245c62d 90 Gene3D G3DSA:2.40.50.140 11 90 6.8E-32 T 14-10-2018 JO40_02260 542c66b91bd01725a689e09df245c62d 90 Pfam PF00366 Ribosomal protein S17 17 84 2.2E-28 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02260 542c66b91bd01725a689e09df245c62d 90 PRINTS PR00973 Ribosomal protein S17 family signature 31 54 2.1E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02260 542c66b91bd01725a689e09df245c62d 90 PRINTS PR00973 Ribosomal protein S17 family signature 63 73 2.1E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02260 542c66b91bd01725a689e09df245c62d 90 PRINTS PR00973 Ribosomal protein S17 family signature 73 80 2.1E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02260 542c66b91bd01725a689e09df245c62d 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 82 2.0E-23 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02260 542c66b91bd01725a689e09df245c62d 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 82 1.4E-31 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02260 542c66b91bd01725a689e09df245c62d 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 63 75 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02260 542c66b91bd01725a689e09df245c62d 90 SUPERFAMILY SSF50249 12 89 8.57E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_02260 542c66b91bd01725a689e09df245c62d 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 12 87 22.77 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_11150 45322a96986b1407f529b6904209294d 354 Pfam PF14842 FliG N-terminal domain 27 126 5.0E-22 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JO40_11150 45322a96986b1407f529b6904209294d 354 Gene3D G3DSA:1.10.220.30 19 101 6.9E-11 T 14-10-2018 JO40_11150 45322a96986b1407f529b6904209294d 354 SUPERFAMILY SSF48029 25 142 4.18E-15 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO40_11150 45322a96986b1407f529b6904209294d 354 Pfam PF14841 FliG middle domain 136 207 2.6E-18 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain JO40_11150 45322a96986b1407f529b6904209294d 354 PRINTS PR00954 Flagellar motor switch protein FliG signature 25 41 3.8E-32 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_11150 45322a96986b1407f529b6904209294d 354 PRINTS PR00954 Flagellar motor switch protein FliG signature 292 318 3.8E-32 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_11150 45322a96986b1407f529b6904209294d 354 PRINTS PR00954 Flagellar motor switch protein FliG signature 215 240 3.8E-32 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_11150 45322a96986b1407f529b6904209294d 354 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 3.8E-32 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_11150 45322a96986b1407f529b6904209294d 354 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 288 3.8E-32 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_11150 45322a96986b1407f529b6904209294d 354 PRINTS PR00954 Flagellar motor switch protein FliG signature 54 80 3.8E-32 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_11150 45322a96986b1407f529b6904209294d 354 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 3.8E-32 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO40_11150 45322a96986b1407f529b6904209294d 354 Gene3D G3DSA:1.10.220.30 107 211 7.8E-22 T 14-10-2018 JO40_11150 45322a96986b1407f529b6904209294d 354 Pfam PF01706 FliG C-terminal domain 238 344 6.3E-23 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal JO40_11150 45322a96986b1407f529b6904209294d 354 Gene3D G3DSA:1.10.220.30 216 354 9.2E-26 T 14-10-2018 JO40_11150 45322a96986b1407f529b6904209294d 354 SUPERFAMILY SSF48029 134 344 4.97E-40 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 987 1099 7.1E-10 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Pfam PF10371 Domain of unknown function 629 678 6.6E-20 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 SUPERFAMILY SSF53323 415 658 3.53E-87 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Gene3D G3DSA:3.40.50.920 259 413 4.4E-57 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Gene3D G3DSA:3.30.70.20 669 783 1.1E-44 T 14-10-2018 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 248 4.6E-75 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 SUPERFAMILY SSF52922 260 413 2.28E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 SUPERFAMILY SSF52518 3 258 1.71E-73 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 PIRSF PIRSF000159 1 1201 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 942 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 351 1.3E-13 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 SUPERFAMILY SSF54862 671 766 1.16E-16 T 14-10-2018 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 SMART SM00890 622 679 5.0E-24 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Pfam PF13484 4Fe-4S double cluster binding domain 688 757 6.4E-9 T 14-10-2018 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Gene3D G3DSA:3.40.50.970 2 258 1.0E-106 T 14-10-2018 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 SUPERFAMILY SSF52518 787 1201 4.34E-127 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 2.3E-32 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JO40_00415 befdb6f2e72adb4da66188493fa899ab 1201 Gene3D G3DSA:3.40.920.10 415 625 7.0E-93 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JO40_09425 49e2d253913e81720cefd35b08f8619e 478 Gene3D G3DSA:3.40.50.300 3 258 2.8E-52 T 14-10-2018 JO40_09425 49e2d253913e81720cefd35b08f8619e 478 SUPERFAMILY SSF52540 5 237 3.11E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09425 49e2d253913e81720cefd35b08f8619e 478 ProSitePatterns PS00211 ABC transporters family signature. 390 404 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_09425 49e2d253913e81720cefd35b08f8619e 478 SMART SM00382 32 228 0.99 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09425 49e2d253913e81720cefd35b08f8619e 478 SMART SM00382 290 466 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09425 49e2d253913e81720cefd35b08f8619e 478 Pfam PF00005 ABC transporter 23 174 1.2E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09425 49e2d253913e81720cefd35b08f8619e 478 SUPERFAMILY SSF52540 274 468 1.36E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09425 49e2d253913e81720cefd35b08f8619e 478 Pfam PF00005 ABC transporter 281 418 3.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09425 49e2d253913e81720cefd35b08f8619e 478 Gene3D G3DSA:3.40.50.300 272 478 4.3E-49 T 14-10-2018 JO40_09425 49e2d253913e81720cefd35b08f8619e 478 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 Pfam PF14559 Tetratricopeptide repeat 692 757 7.4E-9 T 14-10-2018 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 Gene3D G3DSA:1.25.40.10 225 343 1.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SUPERFAMILY SSF48452 355 523 3.98E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SUPERFAMILY SSF48452 489 598 2.28E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SUPERFAMILY SSF48452 245 337 3.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 Gene3D G3DSA:1.25.40.10 344 608 4.4E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SMART SM00028 354 387 3.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SMART SM00028 478 508 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SMART SM00028 285 318 32.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SMART SM00028 614 647 0.39 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SMART SM00028 408 441 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SMART SM00028 251 284 4.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SMART SM00028 681 714 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 Gene3D G3DSA:1.25.40.10 609 759 1.8E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 Pfam PF13181 Tetratricopeptide repeat 614 646 0.032 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 SUPERFAMILY SSF48452 610 737 3.38E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10750 7cfe0766b78d15a2f5a02a6bb2f9618c 759 Gene3D G3DSA:2.60.120.560 47 221 2.1E-7 T 14-10-2018 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 1.7E-31 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 SUPERFAMILY SSF51621 1 342 6.63E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 SUPERFAMILY SSF52935 320 470 2.22E-39 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 Gene3D G3DSA:2.40.33.10 70 166 1.5E-186 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 4.1E-138 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 PRINTS PR01050 Pyruvate kinase family signature 266 290 6.8E-74 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 PRINTS PR01050 Pyruvate kinase family signature 310 326 6.8E-74 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 PRINTS PR01050 Pyruvate kinase family signature 184 198 6.8E-74 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 PRINTS PR01050 Pyruvate kinase family signature 59 75 6.8E-74 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 PRINTS PR01050 Pyruvate kinase family signature 291 309 6.8E-74 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 PRINTS PR01050 Pyruvate kinase family signature 241 265 6.8E-74 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 PRINTS PR01050 Pyruvate kinase family signature 214 240 6.8E-74 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 Gene3D G3DSA:3.20.20.60 2 332 1.5E-186 T 14-10-2018 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 SUPERFAMILY SSF50800 70 165 1.19E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 Gene3D G3DSA:3.40.1380.20 333 466 1.5E-186 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_02070 62e8e85669ad8d1a7d7309062a7ae431 471 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 470 5.9E-175 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO40_09695 e46425ee80e7d064ca5c77462a5b215b 574 Gene3D G3DSA:1.20.1530.20 19 415 7.8E-38 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JO40_09695 e46425ee80e7d064ca5c77462a5b215b 574 Gene3D G3DSA:3.10.580.10 423 558 6.3E-6 T 14-10-2018 JO40_09695 e46425ee80e7d064ca5c77462a5b215b 574 SUPERFAMILY SSF54631 444 563 6.16E-11 T 14-10-2018 JO40_09695 e46425ee80e7d064ca5c77462a5b215b 574 Pfam PF00571 CBS domain 507 554 0.0013 T 14-10-2018 IPR000644 CBS domain JO40_09695 e46425ee80e7d064ca5c77462a5b215b 574 Pfam PF00999 Sodium/hydrogen exchanger family 25 398 4.1E-36 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JO40_00425 c5227c9d680882c2e578b55da2a80f84 401 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 10 399 4.6E-180 T 14-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 JO40_00425 c5227c9d680882c2e578b55da2a80f84 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 205 219 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JO40_00425 c5227c9d680882c2e578b55da2a80f84 401 Gene3D G3DSA:3.90.1150.10 265 401 2.1E-55 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_00425 c5227c9d680882c2e578b55da2a80f84 401 PIRSF PIRSF001434 1 400 4.0E-147 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JO40_00425 c5227c9d680882c2e578b55da2a80f84 401 SUPERFAMILY SSF53383 25 399 1.29E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_00425 c5227c9d680882c2e578b55da2a80f84 401 Gene3D G3DSA:3.40.640.10 11 264 6.5E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_00425 c5227c9d680882c2e578b55da2a80f84 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 396 6.8E-151 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 3.5E-26 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 3.5E-26 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 3.5E-26 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 3.5E-26 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 3.5E-26 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 Gene3D G3DSA:3.30.930.10 104 421 4.3E-129 T 14-10-2018 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 38.396 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 PIRSF PIRSF001529 1 421 3.6E-152 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 SUPERFAMILY SSF55681 116 421 4.97E-83 T 14-10-2018 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 Gene3D G3DSA:1.10.287.40 1 103 1.1E-23 T 14-10-2018 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 1.3E-153 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 4.1E-24 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 399 1.0E-31 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_01735 56495b4ec4bf12a58a891d25b31e79b8 422 SUPERFAMILY SSF46589 1 111 2.72E-24 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JO40_11390 ebb9bbd92373bc293bfa1a307b3f2306 239 Gene3D G3DSA:3.40.50.150 8 235 5.8E-35 T 14-10-2018 JO40_11390 ebb9bbd92373bc293bfa1a307b3f2306 239 Pfam PF13649 Methyltransferase domain 37 132 1.4E-11 T 14-10-2018 JO40_11390 ebb9bbd92373bc293bfa1a307b3f2306 239 SUPERFAMILY SSF53335 2 239 3.16E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_11390 ebb9bbd92373bc293bfa1a307b3f2306 239 Gene3D G3DSA:2.20.25.110 140 198 5.8E-35 T 14-10-2018 JO40_02675 9aad6be13e1eff83e0cead2f2e59872e 348 SUPERFAMILY SSF159664 222 346 9.03E-34 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 JO40_02675 9aad6be13e1eff83e0cead2f2e59872e 348 SUPERFAMILY SSF159672 2 235 1.31E-52 T 14-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 JO40_02675 9aad6be13e1eff83e0cead2f2e59872e 348 Gene3D G3DSA:3.30.420.180 220 348 1.5E-31 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 JO40_02675 9aad6be13e1eff83e0cead2f2e59872e 348 Pfam PF01890 Cobalamin synthesis G C-terminus 230 345 9.4E-30 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 JO40_02675 9aad6be13e1eff83e0cead2f2e59872e 348 Gene3D G3DSA:3.40.50.11220 1 119 6.0E-34 T 14-10-2018 JO40_02675 9aad6be13e1eff83e0cead2f2e59872e 348 Pfam PF11760 Cobalamin synthesis G N-terminal 47 124 1.5E-33 T 14-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 PIRSF PIRSF005917 1 223 1.8E-86 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 SUPERFAMILY SSF53790 2 220 5.63E-68 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 202 3.8E-23 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 222 34.328 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 Gene3D G3DSA:3.30.950.10 111 223 3.9E-29 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 Gene3D G3DSA:3.40.1010.10 1 110 1.5E-40 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JO40_05320 04d61f4ec00030487ad4fbd1ae218866 223 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 3 221 1.7E-61 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 128 1.6E-23 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 Gene3D G3DSA:1.20.5.710 4 55 3.1E-22 T 14-10-2018 JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 Gene3D G3DSA:3.30.1390.10 56 129 5.0E-27 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 1.5E-20 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 128 6.0E-20 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 2.7E-47 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 SUPERFAMILY SSF54736 55 128 7.15E-20 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 SUPERFAMILY SSF48300 5 62 4.45E-16 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00765 f71366c481bb9b6fe8faee24b06f749b 129 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 129 23.876 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00255 2805d634814611d114b8af9c05795c98 437 Pfam PF00349 Hexokinase 22 192 8.7E-16 T 14-10-2018 IPR022672 Hexokinase, N-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 JO40_00255 2805d634814611d114b8af9c05795c98 437 Pfam PF03727 Hexokinase 207 435 1.6E-36 T 14-10-2018 IPR022673 Hexokinase, C-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 JO40_00255 2805d634814611d114b8af9c05795c98 437 SUPERFAMILY SSF53067 2 196 1.01E-33 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 PRINTS PR00475 Hexokinase family signature 64 80 4.2E-23 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 PRINTS PR00475 Hexokinase family signature 346 368 4.2E-23 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 PRINTS PR00475 Hexokinase family signature 207 221 4.2E-23 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 PRINTS PR00475 Hexokinase family signature 420 436 4.2E-23 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 PRINTS PR00475 Hexokinase family signature 179 195 4.2E-23 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 PRINTS PR00475 Hexokinase family signature 269 291 4.2E-23 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 SUPERFAMILY SSF53067 206 434 1.3E-41 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 Gene3D G3DSA:3.40.367.20 24 423 1.1E-65 T 14-10-2018 JO40_00255 2805d634814611d114b8af9c05795c98 437 Gene3D G3DSA:3.30.420.40 37 434 1.1E-65 T 14-10-2018 JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 316 1.0E-33 T 14-10-2018 IPR000160 GGDEF domain JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 SMART SM00267 152 320 3.8E-35 T 14-10-2018 IPR000160 GGDEF domain JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 Gene3D G3DSA:2.60.120.10 1 149 4.2E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 3.9E-22 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 SUPERFAMILY SSF55073 168 321 5.49E-37 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 SMART SM00100 17 137 7.7E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 160 319 6.9E-36 T 14-10-2018 IPR000160 GGDEF domain JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 44 60 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 Gene3D G3DSA:3.30.70.270 155 319 1.8E-41 T 14-10-2018 JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 PRINTS PR00103 cAMP-dependent protein kinase signature 82 91 2.5E-5 T 14-10-2018 JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 PRINTS PR00103 cAMP-dependent protein kinase signature 53 67 2.5E-5 T 14-10-2018 JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 PRINTS PR00103 cAMP-dependent protein kinase signature 38 52 2.5E-5 T 14-10-2018 JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 PRINTS PR00103 cAMP-dependent protein kinase signature 123 134 2.5E-5 T 14-10-2018 JO40_06005 7547d0d6afb76c21e3c3ecb573a2d22a 322 SUPERFAMILY SSF51206 9 137 6.81E-32 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SUPERFAMILY SSF81901 52 300 8.11E-41 T 14-10-2018 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Gene3D G3DSA:1.25.40.10 195 298 1.1E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Gene3D G3DSA:1.25.40.10 25 194 9.8E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Gene3D G3DSA:1.25.40.10 299 384 1.1E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Pfam PF13432 Tetratricopeptide repeat 56 115 8.1E-4 T 14-10-2018 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Pfam PF13414 TPR repeat 136 172 1.7E-9 T 14-10-2018 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 265 298 8.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 231 264 7.3E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 50 83 6.7E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 332 365 4.5E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 197 230 0.0019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 299 331 0.35 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 159 192 0.025 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 84 117 0.04 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SMART SM00028 125 158 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Pfam PF13181 Tetratricopeptide repeat 199 228 7.7E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Pfam PF13181 Tetratricopeptide repeat 270 296 0.0023 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Pfam PF13181 Tetratricopeptide repeat 300 329 9.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 SUPERFAMILY SSF48452 264 381 5.22E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Pfam PF00515 Tetratricopeptide repeat 231 260 1.1E-6 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_12495 5db7d6120a8149668461dc9edc4ba449 415 Pfam PF00515 Tetratricopeptide repeat 333 365 7.0E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_01670 6c30e79c865157701919a043cfe8545c 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 1.6E-60 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO40_01670 6c30e79c865157701919a043cfe8545c 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO40_01670 6c30e79c865157701919a043cfe8545c 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 33.8 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO40_01670 6c30e79c865157701919a043cfe8545c 159 Gene3D G3DSA:3.30.1330.50 1 159 4.3E-64 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO40_01670 6c30e79c865157701919a043cfe8545c 159 Pfam PF02542 YgbB family 1 154 1.9E-59 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO40_01670 6c30e79c865157701919a043cfe8545c 159 SUPERFAMILY SSF69765 1 156 4.19E-58 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO40_11630 4f586cffb9e403c4099319a38fd0fb58 254 Gene3D G3DSA:3.40.50.410 21 213 1.3E-19 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_11630 4f586cffb9e403c4099319a38fd0fb58 254 SUPERFAMILY SSF53300 21 205 1.1E-19 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_11630 4f586cffb9e403c4099319a38fd0fb58 254 Pfam PF00092 von Willebrand factor type A domain 74 209 1.1E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_11630 4f586cffb9e403c4099319a38fd0fb58 254 PIRSF PIRSF020634 17 42 4.4 T 14-10-2018 IPR011392 Tellurite resistance, TerY JO40_11630 4f586cffb9e403c4099319a38fd0fb58 254 PIRSF PIRSF020634 57 253 1.8E-35 T 14-10-2018 IPR011392 Tellurite resistance, TerY JO40_11630 4f586cffb9e403c4099319a38fd0fb58 254 SMART SM00327 19 227 3.8E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 SUPERFAMILY SSF49493 126 279 3.4E-17 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 4 377 39.07 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Pfam PF00226 DnaJ domain 7 69 3.7E-27 T 14-10-2018 IPR001623 DnaJ domain JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 PRINTS PR00625 DnaJ domain signature 9 27 4.8E-32 T 14-10-2018 IPR001623 DnaJ domain JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 PRINTS PR00625 DnaJ domain signature 44 64 4.8E-32 T 14-10-2018 IPR001623 DnaJ domain JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 PRINTS PR00625 DnaJ domain signature 27 42 4.8E-32 T 14-10-2018 IPR001623 DnaJ domain JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 PRINTS PR00625 DnaJ domain signature 64 83 4.8E-32 T 14-10-2018 IPR001623 DnaJ domain JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Pfam PF00684 DnaJ central domain 159 219 1.5E-12 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 SMART SM00271 6 64 7.6E-30 T 14-10-2018 IPR001623 DnaJ domain JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 SUPERFAMILY SSF57938 146 223 4.71E-20 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 49 68 - T 14-10-2018 IPR018253 DnaJ domain, conserved site JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Gene3D G3DSA:2.10.230.10 159 219 5.1E-35 T 14-10-2018 JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Gene3D G3DSA:1.10.287.110 3 122 3.3E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Pfam PF01556 DnaJ C terminal domain 133 345 1.1E-39 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Gene3D G3DSA:2.60.260.20 129 261 5.1E-35 T 14-10-2018 JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 SUPERFAMILY SSF46565 4 112 7.07E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 Gene3D G3DSA:2.60.260.20 266 371 2.9E-30 T 14-10-2018 JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 7 361 2.0E-128 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JO40_02590 b6110499dd722ca5ce683504dc9a9c60 378 SUPERFAMILY SSF49493 270 356 3.79E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JO40_04960 200a467c5ecef32bf1e05be7f922deed 383 SUPERFAMILY SSF55073 232 382 3.3E-33 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_04960 200a467c5ecef32bf1e05be7f922deed 383 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 380 3.7E-33 T 14-10-2018 IPR000160 GGDEF domain JO40_04960 200a467c5ecef32bf1e05be7f922deed 383 SMART SM00267 217 381 8.7E-29 T 14-10-2018 IPR000160 GGDEF domain JO40_04960 200a467c5ecef32bf1e05be7f922deed 383 Pfam PF00990 Diguanylate cyclase, GGDEF domain 228 377 5.0E-32 T 14-10-2018 IPR000160 GGDEF domain JO40_04960 200a467c5ecef32bf1e05be7f922deed 383 Gene3D G3DSA:3.30.70.270 227 383 1.5E-36 T 14-10-2018 JO40_07370 88b0d531dce57564137390b5a7ccac92 365 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 357 3.0E-106 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JO40_07370 88b0d531dce57564137390b5a7ccac92 365 SUPERFAMILY SSF52402 1 243 6.62E-54 T 14-10-2018 JO40_07370 88b0d531dce57564137390b5a7ccac92 365 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 358 40.563 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JO40_07370 88b0d531dce57564137390b5a7ccac92 365 Gene3D G3DSA:2.30.30.280 214 273 8.1E-20 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JO40_07370 88b0d531dce57564137390b5a7ccac92 365 Pfam PF03054 tRNA methyl transferase 2 357 2.9E-116 T 14-10-2018 JO40_07370 88b0d531dce57564137390b5a7ccac92 365 Gene3D G3DSA:2.40.30.10 274 364 3.4E-22 T 14-10-2018 JO40_07370 88b0d531dce57564137390b5a7ccac92 365 Gene3D G3DSA:3.40.50.620 1 208 1.3E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 Gene3D G3DSA:1.25.40.10 158 365 2.4E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SUPERFAMILY SSF48452 24 366 4.25E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 158 191 0.11 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 319 352 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 260 293 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 90 123 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 124 157 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 56 89 7.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 192 225 27.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 SMART SM00028 22 55 0.01 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 Gene3D G3DSA:1.25.40.10 18 154 2.5E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 Pfam PF13432 Tetratricopeptide repeat 100 140 8.3E-4 T 14-10-2018 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 Pfam PF13432 Tetratricopeptide repeat 163 219 8.6E-6 T 14-10-2018 JO40_09080 f8ed5c721d930c5efbcc2f95f3be92bb 658 Pfam PF14559 Tetratricopeptide repeat 36 95 3.3E-8 T 14-10-2018 JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 Gene3D G3DSA:1.20.1260.10 1 145 3.5E-45 T 14-10-2018 IPR012347 Ferritin-like JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 26 42 2.3E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 2.3E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 2.3E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 ProSitePatterns PS00818 Dps protein family signature 1. 26 42 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 Pfam PF00210 Ferritin-like domain 6 144 2.6E-22 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 ProSitePatterns PS00819 Dps protein family signature 2. 52 66 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 PIRSF PIRSF005900 1 145 9.4E-43 T 14-10-2018 IPR002177 DNA-binding protein Dps JO40_05370 80f6da1ae8385cf4dbb1940726da0ab8 145 SUPERFAMILY SSF47240 4 144 1.67E-34 T 14-10-2018 IPR009078 Ferritin-like superfamily JO40_01680 40b613e5518f25646d89732bd99ce711 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 2.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_01680 40b613e5518f25646d89732bd99ce711 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 2.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_01680 40b613e5518f25646d89732bd99ce711 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_01680 40b613e5518f25646d89732bd99ce711 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 197 1.9E-16 T 14-10-2018 JO40_01680 40b613e5518f25646d89732bd99ce711 233 Gene3D G3DSA:1.10.150.520 19 101 6.6E-27 T 14-10-2018 JO40_01680 40b613e5518f25646d89732bd99ce711 233 SUPERFAMILY SSF56784 5 231 3.55E-29 T 14-10-2018 IPR036412 HAD-like superfamily JO40_01680 40b613e5518f25646d89732bd99ce711 233 Gene3D G3DSA:3.40.50.1000 7 201 6.6E-27 T 14-10-2018 IPR023214 HAD superfamily JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 SMART SM00487 22 220 6.1E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 Pfam PF00270 DEAD/DEAH box helicase 27 191 1.4E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 Pfam PF03880 DbpA RNA binding domain 460 521 4.6E-12 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 Gene3D G3DSA:3.40.50.300 2 208 1.3E-71 T 14-10-2018 JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 Gene3D G3DSA:3.40.50.300 211 430 4.4E-50 T 14-10-2018 JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 Gene3D G3DSA:3.30.70.330 459 522 7.5E-6 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 SMART SM00490 256 337 1.3E-33 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 SUPERFAMILY SSF52540 72 358 5.34E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01095 e7bec48b6547d1aa9a597f6c7c697a37 570 Pfam PF00271 Helicase conserved C-terminal domain 229 337 2.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_01050 aef9cb9ea8b5209c91d7b4494ad7c88f 534 Pfam PF08011 PD-(D/E)XK nuclease superfamily 435 528 9.4E-25 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_01050 aef9cb9ea8b5209c91d7b4494ad7c88f 534 Pfam PF09820 Predicted AAA-ATPase 8 289 5.1E-100 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_01050 aef9cb9ea8b5209c91d7b4494ad7c88f 534 SUPERFAMILY SSF52540 31 201 9.03E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01050 aef9cb9ea8b5209c91d7b4494ad7c88f 534 Gene3D G3DSA:3.40.50.300 18 203 4.9E-6 T 14-10-2018 JO40_05645 c706275d72908ca761c401403d593423 211 SUPERFAMILY SSF46689 7 82 2.05E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_05645 c706275d72908ca761c401403d593423 211 Gene3D G3DSA:1.10.357.10 11 209 7.7E-31 T 14-10-2018 JO40_05645 c706275d72908ca761c401403d593423 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 64 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 SUPERFAMILY SSF52096 321 531 4.97E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_04175 065891e4cf08f083cb695a391d0415b8 609 Pfam PF01343 Peptidase family S49 138 287 1.7E-25 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 Pfam PF01343 Peptidase family S49 391 542 6.2E-41 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 Gene3D G3DSA:3.40.1750.10 186 498 5.7E-132 T 14-10-2018 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 Gene3D G3DSA:3.90.226.10 315 540 5.7E-132 T 14-10-2018 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 325 539 2.4E-51 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 SUPERFAMILY SSF52096 32 285 1.09E-18 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_04175 065891e4cf08f083cb695a391d0415b8 609 Gene3D G3DSA:3.90.226.10 95 314 5.7E-132 T 14-10-2018 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 19 572 3.3E-156 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 JO40_04175 065891e4cf08f083cb695a391d0415b8 609 PIRSF PIRSF001217 10 608 1.3E-190 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 JO40_11235 e3560b2045e53169016af99167e65983 195 Gene3D G3DSA:3.40.50.170 1 195 1.7E-65 T 14-10-2018 JO40_11235 e3560b2045e53169016af99167e65983 195 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 191 3.5E-56 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 JO40_11235 e3560b2045e53169016af99167e65983 195 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 194 24.672 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 JO40_11235 e3560b2045e53169016af99167e65983 195 SUPERFAMILY SSF53328 3 192 2.49E-45 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO40_11235 e3560b2045e53169016af99167e65983 195 Pfam PF00551 Formyl transferase 3 187 1.4E-44 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO40_02565 545b051b12f65c103d0101526a29e1fe 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 295 2.5E-56 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JO40_02565 545b051b12f65c103d0101526a29e1fe 314 Pfam PF01545 Cation efflux family 16 213 1.5E-36 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JO40_02565 545b051b12f65c103d0101526a29e1fe 314 Gene3D G3DSA:3.30.70.1350 214 296 3.7E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JO40_02565 545b051b12f65c103d0101526a29e1fe 314 Gene3D G3DSA:1.20.1510.10 9 213 5.3E-42 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JO40_02565 545b051b12f65c103d0101526a29e1fe 314 SUPERFAMILY SSF161111 7 214 9.94E-44 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JO40_02565 545b051b12f65c103d0101526a29e1fe 314 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 295 8.9E-20 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain JO40_02565 545b051b12f65c103d0101526a29e1fe 314 SUPERFAMILY SSF160240 218 296 9.81E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 Gene3D G3DSA:1.10.8.60 359 434 8.7E-22 T 14-10-2018 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 SMART SM00065 15 162 0.0038 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 SMART SM00382 206 349 6.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 Gene3D G3DSA:1.10.10.60 443 513 7.9E-9 T 14-10-2018 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 272 287 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 Gene3D G3DSA:3.30.450.40 6 156 4.2E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 Pfam PF13185 GAF domain 15 152 3.6E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 SUPERFAMILY SSF52540 185 427 3.03E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 SUPERFAMILY SSF55781 17 160 5.23E-15 T 14-10-2018 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 Pfam PF00158 Sigma-54 interaction domain 186 352 4.7E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO40_01515 6f7e8b0e369d3c569fee88041b148745 513 Gene3D G3DSA:3.40.50.300 175 357 1.1E-63 T 14-10-2018 JO40_13235 f46cb49696a26e90a9193d5786e3b672 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 113 11.858 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JO40_13235 f46cb49696a26e90a9193d5786e3b672 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 109 1.6E-15 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JO40_13235 f46cb49696a26e90a9193d5786e3b672 118 Pfam PF00825 Ribonuclease P 7 109 1.5E-16 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JO40_13235 f46cb49696a26e90a9193d5786e3b672 118 SUPERFAMILY SSF54211 5 115 3.79E-19 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_13235 f46cb49696a26e90a9193d5786e3b672 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 12 88 1.0E-6 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JO40_13235 f46cb49696a26e90a9193d5786e3b672 118 Gene3D G3DSA:3.30.230.10 2 113 3.7E-19 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 270 349 3.3E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 SMART SM00729 6 210 1.8E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 Pfam PF13186 Iron-sulfur cluster-binding domain 270 329 2.1E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 PIRSF PIRSF037420 1 361 2.6E-47 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 Pfam PF04055 Radical SAM superfamily 13 169 1.4E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 SUPERFAMILY SSF102114 8 336 1.83E-43 T 14-10-2018 JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 TIGRFAM TIGR04340 rSAM_ACGX: radical SAM/SPASM domain protein, ACGX system 4 360 5.0E-159 T 14-10-2018 IPR027583 Radical SAM/SPASM domain protein, ACGX system JO40_09340 bf2bd2b70f08f616a2a92913110f07d3 361 Gene3D G3DSA:3.20.20.70 7 360 3.9E-38 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_06355 5bae34df1e068dc05de090a905459a48 331 Gene3D G3DSA:1.10.20.140 127 198 1.4E-84 T 14-10-2018 JO40_06355 5bae34df1e068dc05de090a905459a48 331 SUPERFAMILY SSF52540 6 165 4.39E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06355 5bae34df1e068dc05de090a905459a48 331 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 317 26.831 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JO40_06355 5bae34df1e068dc05de090a905459a48 331 Gene3D G3DSA:3.40.50.300 8 302 1.4E-84 T 14-10-2018 JO40_06355 5bae34df1e068dc05de090a905459a48 331 Pfam PF01715 IPP transferase 53 300 6.4E-70 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JO40_06355 5bae34df1e068dc05de090a905459a48 331 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 302 3.3E-76 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JO40_04825 d98a89efce1c1fb35e651799c0349fba 76 SUPERFAMILY SSF89447 3 67 4.81E-12 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO40_04825 d98a89efce1c1fb35e651799c0349fba 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 51 3.7E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_04825 d98a89efce1c1fb35e651799c0349fba 76 SMART SM00966 7 47 1.6E-4 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_04825 d98a89efce1c1fb35e651799c0349fba 76 Gene3D G3DSA:2.10.260.10 1 76 3.5E-30 T 14-10-2018 JO40_05295 e2db7da93e52753af721e616de53f779 240 Gene3D G3DSA:3.40.50.1580 1 240 1.4E-61 T 14-10-2018 JO40_05295 e2db7da93e52753af721e616de53f779 240 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 239 2.1E-53 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JO40_05295 e2db7da93e52753af721e616de53f779 240 Pfam PF01048 Phosphorylase superfamily 2 237 4.4E-48 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JO40_05295 e2db7da93e52753af721e616de53f779 240 SUPERFAMILY SSF53167 1 240 1.31E-57 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 584 608 4.5E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 459 481 4.5E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 459 720 7.2E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 SUPERFAMILY SSF51395 39 441 1.52E-65 T 14-10-2018 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 Gene3D G3DSA:3.50.50.60 558 711 7.1E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 SUPERFAMILY SSF51971 457 711 6.71E-30 T 14-10-2018 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 42 308 5.6E-32 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 357 409 9.8E-5 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 Gene3D G3DSA:3.20.20.70 38 448 5.2E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 588 606 1.1E-15 T 14-10-2018 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 703 719 1.1E-15 T 14-10-2018 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 546 564 1.1E-15 T 14-10-2018 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 479 1.1E-15 T 14-10-2018 JO40_00515 f818e688e9f30ac739880d4a677e42f3 757 Gene3D G3DSA:3.40.50.720 461 750 7.1E-42 T 14-10-2018 JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 164 1.3E-23 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 SUPERFAMILY SSF54211 86 166 5.06E-22 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 Gene3D G3DSA:3.30.230.10 81 173 3.3E-31 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 Gene3D G3DSA:3.30.160.20 9 80 3.4E-29 T 14-10-2018 JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 SUPERFAMILY SSF54768 14 83 2.09E-21 T 14-10-2018 JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 168 9.3E-64 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 20 80 5.8E-27 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 33.721 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO40_02225 c4a800975f0a297a33b15a0295d437a0 173 ProSitePatterns PS00585 Ribosomal protein S5 signature. 35 67 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site JO40_08570 ded412732bec23d60f2d1dd52681eda5 235 Gene3D G3DSA:3.40.50.300 1 235 1.4E-64 T 14-10-2018 JO40_08570 ded412732bec23d60f2d1dd52681eda5 235 PIRSF PIRSF039137 1 235 5.5E-110 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 JO40_08570 ded412732bec23d60f2d1dd52681eda5 235 SUPERFAMILY SSF52540 2 232 6.74E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08570 ded412732bec23d60f2d1dd52681eda5 235 SMART SM00382 27 213 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08570 ded412732bec23d60f2d1dd52681eda5 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08570 ded412732bec23d60f2d1dd52681eda5 235 Pfam PF00005 ABC transporter 19 162 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 SUPERFAMILY SSF52374 2 676 1.53E-140 T 14-10-2018 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 SUPERFAMILY SSF47323 672 857 2.43E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Gene3D G3DSA:1.10.730.10 7 787 0.0 T 14-10-2018 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 129 146 1.8E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 504 522 1.8E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 576 586 1.8E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 1.8E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 543 565 1.8E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 155 171 1.8E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 187 200 1.8E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Pfam PF09334 tRNA synthetases class I (M) 42 185 2.4E-20 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Gene3D G3DSA:3.90.740.10 228 428 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 857 22.949 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Gene3D G3DSA:3.40.50.620 34 585 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 418 1.9E-67 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Gene3D G3DSA:3.10.20.590 797 857 1.6E-20 T 14-10-2018 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Pfam PF08264 Anticodon-binding domain of tRNA 710 817 1.1E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 SUPERFAMILY SSF50677 227 429 8.37E-54 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Gene3D G3DSA:3.10.330.110 586 638 0.0 T 14-10-2018 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 629 655 5.6E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_00040 2ea4840d865b19c20562f857ae04a753 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 858 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO40_00110 63c38543618acf1e2b448488b5d48e0c 414 Gene3D G3DSA:1.20.1330.10 41 264 1.2E-29 T 14-10-2018 JO40_00110 63c38543618acf1e2b448488b5d48e0c 414 SUPERFAMILY SSF64518 1 414 9.02E-53 T 14-10-2018 JO40_00110 63c38543618acf1e2b448488b5d48e0c 414 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 3 413 1.1E-105 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 JO40_00110 63c38543618acf1e2b448488b5d48e0c 414 Pfam PF07196 Flagellin hook IN motif 218 264 5.6E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JO40_00110 63c38543618acf1e2b448488b5d48e0c 414 Pfam PF00700 Bacterial flagellin C-terminal helical region 332 413 7.2E-8 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_00110 63c38543618acf1e2b448488b5d48e0c 414 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 1.0E-11 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_06975 7beb7d70c718dd375ded8969f3df7472 396 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 321 327 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_06975 7beb7d70c718dd375ded8969f3df7472 396 Gene3D G3DSA:3.40.50.150 164 390 3.2E-102 T 14-10-2018 JO40_06975 7beb7d70c718dd375ded8969f3df7472 396 SUPERFAMILY SSF53335 150 367 1.36E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_06975 7beb7d70c718dd375ded8969f3df7472 396 Pfam PF01170 Putative RNA methylase family UPF0020 166 377 2.3E-36 T 14-10-2018 IPR000241 Putative RNA methylase domain JO40_06975 7beb7d70c718dd375ded8969f3df7472 396 Gene3D G3DSA:3.30.2130.30 6 249 3.2E-102 T 14-10-2018 JO40_06975 7beb7d70c718dd375ded8969f3df7472 396 Pfam PF02926 THUMP domain 42 157 4.3E-5 T 14-10-2018 IPR004114 THUMP domain GO:0003723 JO40_04120 b489b003e61005be0ed4823343d139cf 93 SUPERFAMILY SSF143011 1 93 1.14E-15 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_04120 b489b003e61005be0ed4823343d139cf 93 Gene3D G3DSA:3.30.2310.20 1 93 2.3E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_04120 b489b003e61005be0ed4823343d139cf 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 93 6.1E-22 T 14-10-2018 IPR007711 Toxin HigB-1 JO40_04730 9ba2caafcfb842b2634faa4fbdcefe13 288 Gene3D G3DSA:3.40.50.150 1 285 1.2E-80 T 14-10-2018 JO40_04730 9ba2caafcfb842b2634faa4fbdcefe13 288 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 277 35.069 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 JO40_04730 9ba2caafcfb842b2634faa4fbdcefe13 288 SUPERFAMILY SSF53335 9 275 4.73E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_04730 9ba2caafcfb842b2634faa4fbdcefe13 288 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 274 5.6E-47 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 JO40_05990 e43d8b9e173dad13a95ac40410e323b7 257 SUPERFAMILY SSF51556 1 255 1.63E-70 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_05990 e43d8b9e173dad13a95ac40410e323b7 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 6.3E-77 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 JO40_05990 e43d8b9e173dad13a95ac40410e323b7 257 Gene3D G3DSA:3.20.20.140 1 255 1.7E-71 T 14-10-2018 JO40_05990 e43d8b9e173dad13a95ac40410e323b7 257 PIRSF PIRSF005902 1 257 7.3E-67 T 14-10-2018 IPR001130 TatD family GO:0016788 JO40_05990 e43d8b9e173dad13a95ac40410e323b7 257 Pfam PF01026 TatD related DNase 4 253 3.0E-64 T 14-10-2018 IPR001130 TatD family GO:0016788 JO40_03970 01149112b0d64e8559d576c890657dc7 424 Gene3D G3DSA:3.40.50.11900 276 424 7.9E-48 T 14-10-2018 JO40_03970 01149112b0d64e8559d576c890657dc7 424 Gene3D G3DSA:3.40.50.11890 69 194 1.7E-33 T 14-10-2018 JO40_03970 01149112b0d64e8559d576c890657dc7 424 Gene3D G3DSA:1.20.1270.370 63 259 1.7E-33 T 14-10-2018 JO40_03970 01149112b0d64e8559d576c890657dc7 424 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 76 423 5.1E-81 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 807 2.3E-188 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Pfam PF07244 Surface antigen variable number repeat 283 354 2.7E-7 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Pfam PF07244 Surface antigen variable number repeat 187 274 1.7E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Pfam PF07244 Surface antigen variable number repeat 359 431 8.2E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Pfam PF07244 Surface antigen variable number repeat 106 183 7.4E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Pfam PF07244 Surface antigen variable number repeat 34 104 6.0E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 PIRSF PIRSF006076 1 813 1.7E-166 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Gene3D G3DSA:2.40.160.50 433 797 1.3E-18 T 14-10-2018 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Gene3D G3DSA:3.10.20.310 187 275 5.8E-18 T 14-10-2018 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Gene3D G3DSA:3.10.20.310 29 103 1.2E-5 T 14-10-2018 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Pfam PF01103 Surface antigen 463 808 4.6E-40 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Gene3D G3DSA:3.10.20.310 357 431 4.7E-21 T 14-10-2018 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Gene3D G3DSA:3.10.20.310 276 356 6.4E-12 T 14-10-2018 JO40_05135 30e2ef81dc7b275ba785a11ad02982c5 816 Gene3D G3DSA:3.10.20.310 104 185 3.4E-16 T 14-10-2018 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Gene3D G3DSA:3.30.565.10 3 218 6.8E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PRINTS PR00775 90kDa heat shock protein signature 178 195 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PRINTS PR00775 90kDa heat shock protein signature 72 89 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PRINTS PR00775 90kDa heat shock protein signature 90 107 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PRINTS PR00775 90kDa heat shock protein signature 2 22 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PRINTS PR00775 90kDa heat shock protein signature 196 214 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PRINTS PR00775 90kDa heat shock protein signature 117 139 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PRINTS PR00775 90kDa heat shock protein signature 23 45 1.1E-60 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 SUPERFAMILY SSF110942 523 637 1.7E-36 T 14-10-2018 IPR037196 HSP90, C-terminal domain JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Gene3D G3DSA:3.30.230.80 257 408 2.3E-63 T 14-10-2018 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 166 3.9E-13 T 14-10-2018 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 SUPERFAMILY SSF54211 242 497 4.25E-92 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 637 30.853 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Gene3D G3DSA:1.20.120.790 504 638 1.9E-45 T 14-10-2018 IPR037196 HSP90, C-terminal domain JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 SUPERFAMILY SSF55874 2 219 3.01E-62 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Gene3D G3DSA:3.40.50.11260 409 498 1.7E-28 T 14-10-2018 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Pfam PF00183 Hsp90 protein 223 637 1.4E-121 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 Gene3D G3DSA:3.30.70.2140 219 241 6.8E-76 T 14-10-2018 JO40_00855 1b23c914aade1ef0a5e326de55f28241 640 PIRSF PIRSF002583 1 640 7.3E-209 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JO40_02245 3fad5d1d21681407a10bbb81d167efd0 183 Pfam PF00673 ribosomal L5P family C-terminus 88 181 4.2E-38 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02245 3fad5d1d21681407a10bbb81d167efd0 183 ProSitePatterns PS00358 Ribosomal protein L5 signature. 61 77 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02245 3fad5d1d21681407a10bbb81d167efd0 183 Gene3D G3DSA:3.30.1440.10 4 183 2.8E-76 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02245 3fad5d1d21681407a10bbb81d167efd0 183 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 5 183 43.091 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02245 3fad5d1d21681407a10bbb81d167efd0 183 Pfam PF00281 Ribosomal protein L5 28 84 8.0E-26 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02245 3fad5d1d21681407a10bbb81d167efd0 183 SUPERFAMILY SSF55282 7 183 4.0E-73 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02245 3fad5d1d21681407a10bbb81d167efd0 183 PIRSF PIRSF002161 2 183 1.2E-63 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_05285 14fb26a72c27ede70bb48c0c820e5d34 380 PIRSF PIRSF005572 1 380 2.4E-121 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JO40_05285 14fb26a72c27ede70bb48c0c820e5d34 380 Pfam PF00266 Aminotransferase class-V 2 368 2.5E-59 T 14-10-2018 IPR000192 Aminotransferase class V domain JO40_05285 14fb26a72c27ede70bb48c0c820e5d34 380 Gene3D G3DSA:1.10.260.50 13 278 4.4E-110 T 14-10-2018 JO40_05285 14fb26a72c27ede70bb48c0c820e5d34 380 Gene3D G3DSA:3.90.1150.10 2 373 4.4E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_05285 14fb26a72c27ede70bb48c0c820e5d34 380 Gene3D G3DSA:3.40.640.10 59 234 4.4E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_05285 14fb26a72c27ede70bb48c0c820e5d34 380 SUPERFAMILY SSF53383 1 378 6.68E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_09335 99ceeb60ed0633a262f2d2a7c3f04307 318 SMART SM00829 10 316 6.3E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JO40_09335 99ceeb60ed0633a262f2d2a7c3f04307 318 SUPERFAMILY SSF51735 119 287 6.88E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_09335 99ceeb60ed0633a262f2d2a7c3f04307 318 SUPERFAMILY SSF50129 1 145 1.11E-30 T 14-10-2018 IPR011032 GroES-like superfamily JO40_09335 99ceeb60ed0633a262f2d2a7c3f04307 318 Gene3D G3DSA:3.90.180.10 1 318 6.5E-60 T 14-10-2018 JO40_09335 99ceeb60ed0633a262f2d2a7c3f04307 318 Pfam PF00107 Zinc-binding dehydrogenase 156 240 7.7E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 Pfam PF01555 DNA methylase 25 272 2.1E-55 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 28 34 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 Gene3D G3DSA:3.40.50.150 4 296 2.6E-81 T 14-10-2018 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 SUPERFAMILY SSF53335 3 275 1.73E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 213 230 1.4E-31 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 24 38 1.4E-31 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 232 250 1.4E-31 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 70 90 1.4E-31 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_12105 24ab23a78df9ef0607726c7a1def934a 395 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 255 275 1.4E-31 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Gene3D G3DSA:2.40.50.140 259 345 8.7E-11 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SUPERFAMILY SSF50249 257 359 3.15E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Gene3D G3DSA:2.40.50.140 520 608 5.0E-27 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Gene3D G3DSA:2.40.50.140 609 697 1.4E-23 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Pfam PF02224 Cytidylate kinase 3 219 2.4E-70 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 218 3.0E-56 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SUPERFAMILY SSF50249 354 435 5.96E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SUPERFAMILY SSF50249 515 617 1.36E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Gene3D G3DSA:3.40.50.300 1 228 1.1E-68 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Pfam PF00575 S1 RNA binding domain 270 332 4.0E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Pfam PF00575 S1 RNA binding domain 441 511 5.6E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Pfam PF00575 S1 RNA binding domain 614 685 1.1E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Pfam PF00575 S1 RNA binding domain 525 598 1.2E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Pfam PF00575 S1 RNA binding domain 700 774 3.1E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SUPERFAMILY SSF50249 598 688 8.21E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 PRINTS PR00681 Ribosomal protein S1 signature 374 391 1.4E-35 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 PRINTS PR00681 Ribosomal protein S1 signature 273 291 1.4E-35 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 PRINTS PR00681 Ribosomal protein S1 signature 541 560 1.4E-35 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 PRINTS PR00681 Ribosomal protein S1 signature 581 599 1.4E-35 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 PRINTS PR00681 Ribosomal protein S1 signature 291 305 1.4E-35 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 PRINTS PR00681 Ribosomal protein S1 signature 463 484 1.4E-35 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Gene3D G3DSA:2.40.50.140 698 785 1.3E-20 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Gene3D G3DSA:2.40.50.140 438 519 4.5E-25 T 14-10-2018 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SMART SM00316 526 598 2.5E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SMART SM00316 613 685 1.1E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SMART SM00316 271 334 1.6E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SMART SM00316 700 774 9.9E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SMART SM00316 350 422 3.1 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SMART SM00316 441 511 2.5E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SUPERFAMILY SSF50249 680 790 4.5E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SUPERFAMILY SSF50249 441 526 5.97E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 SUPERFAMILY SSF52540 1 222 9.39E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 Hamap MF_00238 Cytidylate kinase [cmk]. 1 223 27.813 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO40_07730 527d2a4e5bc0bc9b13e70fa8d3d5379d 811 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 257 774 1.4E-191 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.6E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.6E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 235 367 1.0E-7 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 Gene3D G3DSA:1.10.8.60 11 239 9.6E-97 T 14-10-2018 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 SMART SM00382 37 178 1.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02375 f6a9500965a14feb6b532572366e43d2 619 Pfam PF13177 DNA polymerase III, delta subunit 21 177 5.7E-44 T 14-10-2018 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 SUPERFAMILY SSF48019 244 367 2.68E-15 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 2.6E-134 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 Gene3D G3DSA:3.40.50.300 13 177 9.6E-97 T 14-10-2018 JO40_02375 f6a9500965a14feb6b532572366e43d2 619 SUPERFAMILY SSF52540 34 223 4.91E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 29 290 3.2E-60 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 Gene3D G3DSA:3.20.20.70 24 306 3.3E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 SUPERFAMILY SSF63380 336 417 5.55E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 261 281 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 SUPERFAMILY SSF51395 45 290 1.06E-53 T 14-10-2018 JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 Gene3D G3DSA:2.40.30.10 326 415 1.0E-12 T 14-10-2018 JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 Pfam PF01180 Dihydroorotate dehydrogenase 47 292 1.3E-45 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 SUPERFAMILY SSF52343 413 582 5.59E-11 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO40_07970 acfbe7de855216a99f2cc73dcd3dd1dc 591 Gene3D G3DSA:3.40.50.80 419 543 2.7E-5 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 Pfam PF00344 SecY translocase 73 412 1.5E-104 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 SUPERFAMILY SSF103491 6 418 1.44E-109 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 Gene3D G3DSA:1.10.3370.10 4 424 3.8E-144 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 419 3.6E-111 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 428 28.085 T 14-10-2018 IPR026593 Protein translocase subunit SecY JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 307 329 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 361 379 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 112 135 2.9E-87 T 14-10-2018 JO40_02210 a41b348af4f6bf3f3fee4984f5523dce 438 PIRSF PIRSF004557 2 435 1.6E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_00840 12f9cc17c61fd417e957eda0c03d706d 786 Pfam PF01522 Polysaccharide deacetylase 576 700 3.0E-10 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 JO40_00840 12f9cc17c61fd417e957eda0c03d706d 786 SUPERFAMILY SSF88713 575 784 2.8E-23 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JO40_00840 12f9cc17c61fd417e957eda0c03d706d 786 Gene3D G3DSA:3.20.20.370 549 785 5.5E-27 T 14-10-2018 JO40_00840 12f9cc17c61fd417e957eda0c03d706d 786 SUPERFAMILY SSF82171 87 473 2.55E-10 T 14-10-2018 JO40_12295 d486c5b661f58732f40aa649684281fb 619 SUPERFAMILY SSF88659 458 531 7.03E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_12295 d486c5b661f58732f40aa649684281fb 619 Gene3D G3DSA:1.10.10.10 458 533 9.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_12295 d486c5b661f58732f40aa649684281fb 619 Gene3D G3DSA:1.10.601.10 129 457 1.4E-79 T 14-10-2018 JO40_12295 d486c5b661f58732f40aa649684281fb 619 Pfam PF00140 Sigma-70 factor, region 1.2 131 162 2.7E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO40_12295 d486c5b661f58732f40aa649684281fb 619 Gene3D G3DSA:1.10.10.10 534 619 1.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_12295 d486c5b661f58732f40aa649684281fb 619 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 381 617 1.9E-116 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 JO40_12295 d486c5b661f58732f40aa649684281fb 619 PRINTS PR00046 Major sigma-70 factor signature 409 422 2.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 PRINTS PR00046 Major sigma-70 factor signature 578 593 2.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 PRINTS PR00046 Major sigma-70 factor signature 557 569 2.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 PRINTS PR00046 Major sigma-70 factor signature 593 604 2.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 PRINTS PR00046 Major sigma-70 factor signature 433 441 2.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 618 35.654 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 JO40_12295 d486c5b661f58732f40aa649684281fb 619 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 381 606 1.9E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 Pfam PF04545 Sigma-70, region 4 553 606 2.1E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 SUPERFAMILY SSF88946 217 452 1.73E-54 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 409 422 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 Pfam PF04539 Sigma-70 region 3 464 538 4.5E-27 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 SUPERFAMILY SSF88659 515 617 1.64E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_12295 d486c5b661f58732f40aa649684281fb 619 Pfam PF04542 Sigma-70 region 2 385 454 2.1E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 Pfam PF03979 Sigma-70 factor, region 1.1 7 67 2.6E-6 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 JO40_12295 d486c5b661f58732f40aa649684281fb 619 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 578 604 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Pfam PF00575 S1 RNA binding domain 619 688 2.3E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 693 29.789 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 318 3.4E-16 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SUPERFAMILY SSF54211 5 142 1.16E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 1.8E-14 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Pfam PF03725 3' exoribonuclease family, domain 2 458 528 1.7E-5 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Pfam PF01138 3' exoribonuclease family, domain 1 14 142 2.6E-16 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Pfam PF01138 3' exoribonuclease family, domain 1 323 454 1.1E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SMART SM00316 620 690 1.9E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Pfam PF00013 KH domain 556 600 2.5E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 PIRSF PIRSF005499 1 698 3.3E-296 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Gene3D G3DSA:3.30.230.70 234 548 3.7E-110 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SUPERFAMILY SSF54791 554 640 9.01E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SUPERFAMILY SSF54211 292 487 2.43E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Gene3D G3DSA:3.30.1370.10 549 621 1.8E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Gene3D G3DSA:3.30.230.70 1 228 8.4E-73 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 689 9.1E-301 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SUPERFAMILY SSF55666 449 547 1.96E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SUPERFAMILY SSF50249 615 691 4.4E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SUPERFAMILY SSF55666 143 234 4.58E-30 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 Gene3D G3DSA:2.40.50.140 622 692 4.4E-27 T 14-10-2018 JO40_01585 54b81052bc87f0b3238ca8199aa86f40 698 SMART SM00322 551 617 2.0E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JO40_03435 b6b0227c84c4d2bb15658739ab68d74b 499 SUPERFAMILY SSF63411 281 476 7.8E-18 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_03435 b6b0227c84c4d2bb15658739ab68d74b 499 Pfam PF00675 Insulinase (Peptidase family M16) 80 195 2.8E-8 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JO40_03435 b6b0227c84c4d2bb15658739ab68d74b 499 Gene3D G3DSA:3.30.830.10 279 482 2.1E-21 T 14-10-2018 JO40_03435 b6b0227c84c4d2bb15658739ab68d74b 499 Pfam PF05193 Peptidase M16 inactive domain 210 359 2.7E-8 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JO40_03435 b6b0227c84c4d2bb15658739ab68d74b 499 SUPERFAMILY SSF63411 44 251 4.5E-40 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_03435 b6b0227c84c4d2bb15658739ab68d74b 499 Gene3D G3DSA:3.30.830.10 45 254 9.1E-40 T 14-10-2018 JO40_08520 6ae8062bbc2658ed68804eb672459aab 199 Gene3D G3DSA:3.40.1010.10 2 98 1.8E-13 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JO40_08520 6ae8062bbc2658ed68804eb672459aab 199 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 180 3.3E-19 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JO40_08520 6ae8062bbc2658ed68804eb672459aab 199 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 5 194 7.0E-55 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 JO40_08520 6ae8062bbc2658ed68804eb672459aab 199 SUPERFAMILY SSF53790 3 185 7.46E-27 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JO40_12785 1212e5c3cc990ca44017faaed570003f 258 Pfam PF05036 Sporulation related domain 187 228 4.0E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JO40_12785 1212e5c3cc990ca44017faaed570003f 258 Gene3D G3DSA:3.30.70.1070 186 230 6.3E-6 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO40_12785 1212e5c3cc990ca44017faaed570003f 258 SUPERFAMILY SSF110997 185 254 4.97E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO40_12785 1212e5c3cc990ca44017faaed570003f 258 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 119 23.112 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 JO40_12785 1212e5c3cc990ca44017faaed570003f 258 Pfam PF03330 Lytic transglycolase 29 115 3.6E-25 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain JO40_12785 1212e5c3cc990ca44017faaed570003f 258 SUPERFAMILY SSF50685 32 117 1.74E-13 T 14-10-2018 IPR036908 RlpA-like domain superfamily JO40_12785 1212e5c3cc990ca44017faaed570003f 258 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 31 215 4.8E-49 T 14-10-2018 IPR012997 Rare lipoprotein A JO40_12785 1212e5c3cc990ca44017faaed570003f 258 Gene3D G3DSA:2.40.40.10 26 120 1.6E-38 T 14-10-2018 IPR036908 RlpA-like domain superfamily JO40_01160 a5fb5009a09e4919b1c5c2bfed460636 429 PIRSF PIRSF011588 1 429 3.0E-216 T 14-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 JO40_01160 a5fb5009a09e4919b1c5c2bfed460636 429 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 2 427 1.7E-203 T 14-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 120 2.3E-13 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 SMART SM00902 517 576 5.7E-18 T 14-10-2018 IPR003149 Iron hydrogenase, small subunit JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Pfam PF12838 4Fe-4S dicluster domain 144 202 3.1E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 SMART SM00929 83 123 2.6E-12 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 221 512 1.1E-88 T 14-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Gene3D G3DSA:3.10.20.740 1 122 5.9E-38 T 14-10-2018 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 SUPERFAMILY SSF54862 133 204 8.37E-15 T 14-10-2018 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 6.0E-15 T 14-10-2018 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Gene3D G3DSA:3.30.70.20 141 203 6.7E-135 T 14-10-2018 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Gene3D G3DSA:3.40.950.10 270 506 6.7E-135 T 14-10-2018 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 139 516 8.5E-134 T 14-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Gene3D G3DSA:4.10.260.20 517 594 3.2E-16 T 14-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 SUPERFAMILY SSF54292 1 120 4.84E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Pfam PF02256 Iron hydrogenase small subunit 525 572 4.1E-19 T 14-10-2018 IPR003149 Iron hydrogenase, small subunit JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 Gene3D G3DSA:3.40.50.1780 204 516 6.7E-135 T 14-10-2018 JO40_11355 0c1afb0e1e02a2eb03c4a990c20babdb 596 SUPERFAMILY SSF53920 187 572 5.1E-120 T 14-10-2018 IPR009016 Iron hydrogenase JO40_05935 83f942d37b2b341971534d30627f5ed9 100 Gene3D G3DSA:3.10.450.530 1 90 1.6E-17 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily JO40_05935 83f942d37b2b341971534d30627f5ed9 100 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 87 8.9E-30 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system JO40_07610 fc561b5b024230473e8d1226e27819b9 292 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 1.7E-73 T 14-10-2018 JO40_07610 fc561b5b024230473e8d1226e27819b9 292 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 292 2.1E-48 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 PRINTS PR00207 Flagellin signature 109 132 3.5E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 PRINTS PR00207 Flagellin signature 74 93 3.5E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 PRINTS PR00207 Flagellin signature 35 52 3.5E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 Gene3D G3DSA:1.20.120.2000 244 285 2.6E-14 T 14-10-2018 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 Gene3D G3DSA:1.20.58.1830 3 31 8.4E-55 T 14-10-2018 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 Gene3D G3DSA:1.20.1330.10 43 178 8.4E-55 T 14-10-2018 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 Pfam PF00700 Bacterial flagellin C-terminal helical region 200 284 1.7E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 1.7E-35 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 Gene3D G3DSA:1.20.1330.10 193 240 1.9E-13 T 14-10-2018 JO40_11935 c6078523f9df4c085b70b9511efd24ff 285 SUPERFAMILY SSF64518 1 285 1.57E-78 T 14-10-2018 JO40_10010 409395f2d5543f275d0290304baa25c9 242 Gene3D G3DSA:1.10.150.520 18 104 4.6E-30 T 14-10-2018 JO40_10010 409395f2d5543f275d0290304baa25c9 242 Gene3D G3DSA:3.40.50.1000 6 230 4.6E-30 T 14-10-2018 IPR023214 HAD superfamily JO40_10010 409395f2d5543f275d0290304baa25c9 242 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 204 1.1E-16 T 14-10-2018 JO40_10010 409395f2d5543f275d0290304baa25c9 242 SUPERFAMILY SSF56784 6 236 3.52E-30 T 14-10-2018 IPR036412 HAD-like superfamily JO40_10010 409395f2d5543f275d0290304baa25c9 242 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 200 2.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_10010 409395f2d5543f275d0290304baa25c9 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 116 129 1.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_10010 409395f2d5543f275d0290304baa25c9 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 167 187 1.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_10010 409395f2d5543f275d0290304baa25c9 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_10010 409395f2d5543f275d0290304baa25c9 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 165 1.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_09660 d89a5275aaf5e28b57bea0aac2351a12 271 Gene3D G3DSA:3.40.50.880 1 270 3.8E-78 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_09660 d89a5275aaf5e28b57bea0aac2351a12 271 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 8 242 6.9E-57 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JO40_09660 d89a5275aaf5e28b57bea0aac2351a12 271 SUPERFAMILY SSF52317 1 242 1.38E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_09660 d89a5275aaf5e28b57bea0aac2351a12 271 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 3 270 1.2E-68 T 14-10-2018 JO40_09660 d89a5275aaf5e28b57bea0aac2351a12 271 SMART SM01211 3 270 2.2E-98 T 14-10-2018 JO40_09660 d89a5275aaf5e28b57bea0aac2351a12 271 PIRSF PIRSF001586 2 271 3.4E-78 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JO40_00990 caa83cdd1041140f36ed3a80c3f3cacc 457 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 210 217 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JO40_00990 caa83cdd1041140f36ed3a80c3f3cacc 457 Pfam PF00171 Aldehyde dehydrogenase family 3 429 1.7E-94 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JO40_00990 caa83cdd1041140f36ed3a80c3f3cacc 457 Gene3D G3DSA:3.40.605.10 15 429 1.6E-172 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JO40_00990 caa83cdd1041140f36ed3a80c3f3cacc 457 PIRSF PIRSF036492 1 457 1.5E-185 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JO40_00990 caa83cdd1041140f36ed3a80c3f3cacc 457 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 238 249 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JO40_00990 caa83cdd1041140f36ed3a80c3f3cacc 457 SUPERFAMILY SSF53720 4 445 1.28E-125 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JO40_00990 caa83cdd1041140f36ed3a80c3f3cacc 457 Gene3D G3DSA:3.40.309.10 214 409 1.6E-172 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JO40_09330 13a9a93c7d5e86d510c810bebfad3561 172 SUPERFAMILY SSF55729 1 168 9.39E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_09330 13a9a93c7d5e86d510c810bebfad3561 172 Pfam PF00583 Acetyltransferase (GNAT) family 46 146 1.2E-17 T 14-10-2018 IPR000182 GNAT domain JO40_09330 13a9a93c7d5e86d510c810bebfad3561 172 Gene3D G3DSA:3.40.630.30 1 171 3.6E-42 T 14-10-2018 JO40_05485 59b4288f767c357dbdf159f42fa74d8a 248 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 41 97 1.1E-12 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain JO40_05485 59b4288f767c357dbdf159f42fa74d8a 248 SUPERFAMILY SSF55874 106 237 4.09E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_05485 59b4288f767c357dbdf159f42fa74d8a 248 Pfam PF14501 GHKL domain 134 236 3.1E-23 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain JO40_05485 59b4288f767c357dbdf159f42fa74d8a 248 Gene3D G3DSA:1.10.287.130 31 93 6.4E-8 T 14-10-2018 JO40_05485 59b4288f767c357dbdf159f42fa74d8a 248 Gene3D G3DSA:3.30.565.10 94 237 2.3E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_05485 59b4288f767c357dbdf159f42fa74d8a 248 SUPERFAMILY SSF55890 41 134 4.32E-21 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 JO40_02075 1a8d3b2a45926fa261744d20d42be14e 312 Gene3D G3DSA:1.10.10.1880 161 229 1.7E-11 T 14-10-2018 JO40_02075 1a8d3b2a45926fa261744d20d42be14e 312 Pfam PF01936 NYN domain 5 136 1.3E-22 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type JO40_02075 1a8d3b2a45926fa261744d20d42be14e 312 Gene3D G3DSA:3.40.50.1010 1 140 1.4E-8 T 14-10-2018 JO40_02075 1a8d3b2a45926fa261744d20d42be14e 312 Gene3D G3DSA:2.40.50.140 230 308 5.8E-6 T 14-10-2018 JO40_02075 1a8d3b2a45926fa261744d20d42be14e 312 Pfam PF12872 OST-HTH/LOTUS domain 173 220 2.0E-11 T 14-10-2018 IPR025605 OST-HTH/LOTUS domain JO40_01220 59bbc0959b969cc878e440b2ddaa3d2f 301 Pfam PF13280 WYL domain 128 294 2.8E-31 T 14-10-2018 IPR026881 WYL domain JO40_01220 59bbc0959b969cc878e440b2ddaa3d2f 301 Pfam PF08279 HTH domain 5 56 1.5E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JO40_01220 59bbc0959b969cc878e440b2ddaa3d2f 301 PIRSF PIRSF016838 1 301 5.8E-30 T 14-10-2018 IPR028349 Protein PafC JO40_01220 59bbc0959b969cc878e440b2ddaa3d2f 301 SUPERFAMILY SSF46785 1 59 1.82E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_01220 59bbc0959b969cc878e440b2ddaa3d2f 301 Gene3D G3DSA:1.10.10.10 1 61 3.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 580 782 4.1E-79 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 SUPERFAMILY SSF88697 17 207 1.37E-34 T 14-10-2018 IPR015947 PUA-like superfamily JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 496 7.4E-21 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 605 621 4.1E-50 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 737 755 4.1E-50 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 714 733 4.1E-50 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 363 382 4.1E-50 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 684 703 4.1E-50 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 TIGRFAM TIGR00763 lon: endopeptidase La 20 782 1.5E-291 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 SMART SM00464 17 208 1.6E-56 T 14-10-2018 IPR003111 Lon, substrate-binding domain JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Gene3D G3DSA:2.30.130.40 10 124 5.5E-23 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Hamap MF_01973 Lon protease [lon]. 18 783 64.613 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Gene3D G3DSA:1.10.8.60 499 594 3.5E-28 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Gene3D G3DSA:3.40.50.300 320 498 7.9E-64 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 SUPERFAMILY SSF52540 320 595 6.35E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Gene3D G3DSA:3.30.230.10 597 790 1.1E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_01200 dc67941a846e33d599059d3eddeb375f 791 SUPERFAMILY SSF54211 605 782 1.78E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_01200 dc67941a846e33d599059d3eddeb375f 791 SMART SM00382 355 500 4.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 207 3.3E-37 T 14-10-2018 IPR003111 Lon, substrate-binding domain JO40_01200 dc67941a846e33d599059d3eddeb375f 791 Gene3D G3DSA:1.20.58.1480 127 250 9.0E-33 T 14-10-2018 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 PIRSF PIRSF001174 4 785 7.9E-302 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JO40_01200 dc67941a846e33d599059d3eddeb375f 791 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 687 695 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 JO40_06120 e0d34858d8b0ed486e3b8c90902337be 180 Gene3D G3DSA:3.30.70.940 1 106 1.1E-9 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO40_06120 e0d34858d8b0ed486e3b8c90902337be 180 SUPERFAMILY SSF50104 117 171 1.15E-9 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO40_06120 e0d34858d8b0ed486e3b8c90902337be 180 SUPERFAMILY SSF82679 1 106 1.57E-12 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO40_06120 e0d34858d8b0ed486e3b8c90902337be 180 Pfam PF02357 Transcription termination factor nusG 2 101 1.9E-10 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO40_06120 e0d34858d8b0ed486e3b8c90902337be 180 Gene3D G3DSA:2.30.30.30 114 171 1.9E-11 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 Gene3D G3DSA:3.40.5.10 1 60 5.2E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 SUPERFAMILY SSF55658 1 57 9.24E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 22.932 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 3.5E-41 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 Gene3D G3DSA:3.10.430.100 61 148 6.2E-19 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 4.5E-20 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.4E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10805 9b032e5bd1d57917d2c59674fac101e2 202 SUPERFAMILY SSF55653 61 147 5.89E-20 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JO40_12250 af4d71bd5e6d96bac8c28b98175dba3b 331 Gene3D G3DSA:3.40.190.10 31 285 8.3E-31 T 14-10-2018 JO40_12250 af4d71bd5e6d96bac8c28b98175dba3b 331 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 323 3.7E-61 T 14-10-2018 JO40_12250 af4d71bd5e6d96bac8c28b98175dba3b 331 SUPERFAMILY SSF53850 26 297 1.98E-40 T 14-10-2018 JO40_12250 af4d71bd5e6d96bac8c28b98175dba3b 331 Gene3D G3DSA:3.40.190.10 116 260 8.3E-31 T 14-10-2018 JO40_12250 af4d71bd5e6d96bac8c28b98175dba3b 331 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 6 284 2.6E-33 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 JO40_07930 d388bc25c4369a3a51de2e1f9553f147 241 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 236 1.7E-40 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JO40_07930 d388bc25c4369a3a51de2e1f9553f147 241 Gene3D G3DSA:3.20.20.190 1 241 1.8E-76 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JO40_07930 d388bc25c4369a3a51de2e1f9553f147 241 SUPERFAMILY SSF51695 4 239 1.57E-71 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 Gene3D G3DSA:1.25.40.20 3 182 1.6E-28 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 PRINTS PR01415 Ankyrin repeat signature 73 88 2.7E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 PRINTS PR01415 Ankyrin repeat signature 120 134 2.7E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 Pfam PF12796 Ankyrin repeats (3 copies) 50 135 4.7E-13 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 SUPERFAMILY SSF48403 31 172 1.61E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 SMART SM00248 104 133 1.5E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 SMART SM00248 37 68 1600.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 SMART SM00248 137 173 60.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_03110 8ee5dc61b3f7749ab832f29bad541dd6 354 SMART SM00248 72 100 1200.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 SMART SM00257 120 164 2.3E-8 T 14-10-2018 IPR018392 LysM domain JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 SMART SM00257 70 114 7.0E-12 T 14-10-2018 IPR018392 LysM domain JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 Gene3D G3DSA:3.10.350.10 117 168 3.7E-9 T 14-10-2018 IPR036779 LysM domain superfamily JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 SUPERFAMILY SSF51261 70 303 6.28E-53 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 Gene3D G3DSA:2.70.70.10 169 307 1.2E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 Gene3D G3DSA:3.10.350.10 64 116 6.6E-14 T 14-10-2018 IPR036779 LysM domain superfamily JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 Pfam PF01476 LysM domain 71 114 6.7E-13 T 14-10-2018 IPR018392 LysM domain JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 Pfam PF01476 LysM domain 121 164 1.3E-7 T 14-10-2018 IPR018392 LysM domain JO40_00130 f2c85b531535fc6356bc90e5e61d287e 307 Pfam PF01551 Peptidase family M23 208 302 1.9E-29 T 14-10-2018 IPR016047 Peptidase M23 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 Gene3D G3DSA:3.50.7.10 191 371 9.5E-230 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 5.3E-100 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 SUPERFAMILY SSF52029 183 375 2.09E-82 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 Gene3D G3DSA:1.10.560.10 7 521 9.5E-230 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 SUPERFAMILY SSF54849 136 203 6.64E-19 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 Gene3D G3DSA:3.30.260.10 135 409 9.5E-230 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 SUPERFAMILY SSF48592 6 521 1.08E-74 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 4.1E-262 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 PRINTS PR00298 60kDa chaperonin signature 397 418 1.8E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 PRINTS PR00298 60kDa chaperonin signature 26 52 1.8E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 PRINTS PR00298 60kDa chaperonin signature 349 374 1.8E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 PRINTS PR00298 60kDa chaperonin signature 267 290 1.8E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 PRINTS PR00298 60kDa chaperonin signature 82 109 1.8E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 41.462 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_08755 f4a74aff8b9fea0a0633e20630f64290 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO40_05200 273c3e1399c89376d198fe2520f2c201 266 Pfam PF06541 Putative ABC-transporter type IV 8 162 2.8E-48 T 14-10-2018 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 JO40_10840 78fe49ebe02537dab2190f8d5fe70387 182 Gene3D G3DSA:1.10.10.10 23 176 4.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_10840 78fe49ebe02537dab2190f8d5fe70387 182 SUPERFAMILY SSF46785 42 175 4.68E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_10840 78fe49ebe02537dab2190f8d5fe70387 182 ProSitePatterns PS01117 MarR-type HTH domain signature. 92 127 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site JO40_10840 78fe49ebe02537dab2190f8d5fe70387 182 Pfam PF01047 MarR family 62 118 1.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO40_10840 78fe49ebe02537dab2190f8d5fe70387 182 SMART SM00347 54 158 8.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO40_05125 f18b2d2435d4e7b341d691264a880ee9 209 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 19.861 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JO40_05125 f18b2d2435d4e7b341d691264a880ee9 209 Pfam PF02223 Thymidylate kinase 9 198 3.0E-41 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 JO40_05125 f18b2d2435d4e7b341d691264a880ee9 209 SUPERFAMILY SSF52540 5 206 1.99E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05125 f18b2d2435d4e7b341d691264a880ee9 209 Gene3D G3DSA:3.40.50.300 5 208 4.4E-49 T 14-10-2018 JO40_05125 f18b2d2435d4e7b341d691264a880ee9 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 198 6.9E-43 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JO40_02255 e40da1b0dce4910109ac58dec9ff6a12 122 SUPERFAMILY SSF50193 1 122 2.22E-52 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02255 e40da1b0dce4910109ac58dec9ff6a12 122 Gene3D G3DSA:2.40.150.20 1 122 4.9E-54 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02255 e40da1b0dce4910109ac58dec9ff6a12 122 SMART SM01374 1 122 2.6E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JO40_02255 e40da1b0dce4910109ac58dec9ff6a12 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02255 e40da1b0dce4910109ac58dec9ff6a12 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.3E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JO40_02255 e40da1b0dce4910109ac58dec9ff6a12 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.2E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 JO40_02255 e40da1b0dce4910109ac58dec9ff6a12 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.154 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 Gene3D G3DSA:3.90.190.20 341 476 1.4E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 SUPERFAMILY SSF53623 106 303 1.2E-34 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 SUPERFAMILY SSF51984 7 96 1.49E-12 T 14-10-2018 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 Pfam PF08245 Mur ligase middle domain 118 297 4.1E-24 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 Gene3D G3DSA:3.40.1190.10 104 313 3.7E-43 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 SUPERFAMILY SSF53244 340 479 4.58E-29 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 478 1.5E-124 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO40_04915 732b7734dde31cbf23a57ebed7386e3b 482 Gene3D G3DSA:3.40.50.720 6 103 1.0E-20 T 14-10-2018 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 Gene3D G3DSA:1.20.1480.50 266 358 2.3E-7 T 14-10-2018 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 SUPERFAMILY SSF103190 29 175 2.04E-15 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 Gene3D G3DSA:1.10.287.950 367 685 9.4E-51 T 14-10-2018 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 SUPERFAMILY SSF58104 409 637 1.44E-47 T 14-10-2018 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 Pfam PF00672 HAMP domain 299 347 3.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 521 1.6E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 571 600 1.6E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 1.6E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 523 552 1.6E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 SMART SM00304 299 353 9.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 Gene3D G3DSA:3.30.450.20 110 163 2.8E-23 T 14-10-2018 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 621 1.4E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 Pfam PF02743 Cache domain 26 261 2.4E-29 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 Gene3D G3DSA:3.30.450.20 164 261 2.8E-23 T 14-10-2018 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 SUPERFAMILY SSF58104 321 422 8.89E-9 T 14-10-2018 JO40_02010 a5cf5f6e7c1425d808475ba1875f0e30 686 SMART SM00283 396 643 2.2E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_06170 f06ecd57ad0e7d38f95df513ee82b2c4 337 Gene3D G3DSA:3.40.50.300 3 123 1.2E-11 T 14-10-2018 JO40_06170 f06ecd57ad0e7d38f95df513ee82b2c4 337 Gene3D G3DSA:1.20.272.10 197 331 9.2E-11 T 14-10-2018 JO40_06170 f06ecd57ad0e7d38f95df513ee82b2c4 337 Pfam PF06144 DNA polymerase III, delta subunit 7 173 2.0E-14 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 JO40_06170 f06ecd57ad0e7d38f95df513ee82b2c4 337 SUPERFAMILY SSF48019 199 321 2.72E-11 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JO40_06170 f06ecd57ad0e7d38f95df513ee82b2c4 337 SUPERFAMILY SSF52540 4 194 1.06E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06170 f06ecd57ad0e7d38f95df513ee82b2c4 337 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 4 321 6.3E-36 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 JO40_06170 f06ecd57ad0e7d38f95df513ee82b2c4 337 Gene3D G3DSA:1.10.8.60 130 196 5.3E-7 T 14-10-2018 JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 PIRSF PIRSF005751 1 343 1.1E-118 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 SMART SM00764 151 335 1.0E-117 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 Gene3D G3DSA:3.40.50.620 151 327 1.8E-17 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 SUPERFAMILY SSF52374 153 337 1.66E-21 T 14-10-2018 JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 Pfam PF08218 Citrate lyase ligase C-terminal domain 152 335 4.1E-64 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 110 336 4.0E-124 T 14-10-2018 JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 SUPERFAMILY SSF55729 34 110 6.18E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_11670 0184ddd5a0fdf140eafa88bc6d85c226 343 Gene3D G3DSA:3.40.630.30 4 134 2.7E-5 T 14-10-2018 JO40_08610 1d36895f42c32b306038b136d46b9b1a 169 SUPERFAMILY SSF55729 6 135 1.1E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_08610 1d36895f42c32b306038b136d46b9b1a 169 Gene3D G3DSA:3.40.630.30 2 141 1.7E-22 T 14-10-2018 JO40_08610 1d36895f42c32b306038b136d46b9b1a 169 Pfam PF00583 Acetyltransferase (GNAT) family 17 125 1.8E-13 T 14-10-2018 IPR000182 GNAT domain JO40_10580 ec39fe6c6f3adef8452815571d54174a 138 Pfam PF02566 OsmC-like protein 38 133 2.0E-20 T 14-10-2018 IPR003718 OsmC/Ohr family JO40_10580 ec39fe6c6f3adef8452815571d54174a 138 Gene3D G3DSA:3.30.300.20 2 137 2.2E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_10580 ec39fe6c6f3adef8452815571d54174a 138 SUPERFAMILY SSF82784 11 135 1.7E-31 T 14-10-2018 IPR036102 OsmC/Ohr superfamily JO40_07740 84a220dc11a5adb9f3f6318e59fe17bc 242 Pfam PF13174 Tetratricopeptide repeat 192 222 1.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07740 84a220dc11a5adb9f3f6318e59fe17bc 242 SUPERFAMILY SSF48452 121 239 2.18E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07740 84a220dc11a5adb9f3f6318e59fe17bc 242 Gene3D G3DSA:1.25.40.10 123 237 1.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07740 84a220dc11a5adb9f3f6318e59fe17bc 242 Pfam PF13424 Tetratricopeptide repeat 123 181 2.0E-8 T 14-10-2018 JO40_07740 84a220dc11a5adb9f3f6318e59fe17bc 242 SMART SM00028 154 187 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07740 84a220dc11a5adb9f3f6318e59fe17bc 242 SMART SM00028 190 223 0.0066 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07740 84a220dc11a5adb9f3f6318e59fe17bc 242 SMART SM00028 117 150 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_05435 80d355ee86c77d934f94ab7cf26b7eb1 546 Gene3D G3DSA:3.20.20.300 30 382 2.2E-91 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JO40_05435 80d355ee86c77d934f94ab7cf26b7eb1 546 Gene3D G3DSA:3.40.50.1700 397 544 1.0E-6 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 JO40_05435 80d355ee86c77d934f94ab7cf26b7eb1 546 SUPERFAMILY SSF51445 26 382 1.79E-81 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_05435 80d355ee86c77d934f94ab7cf26b7eb1 546 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 47 368 1.1E-73 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO40_07940 8874437540f551412330de95ee29d029 202 SUPERFAMILY SSF140478 34 192 5.62E-58 T 14-10-2018 IPR023353 LemA-like domain superfamily JO40_07940 8874437540f551412330de95ee29d029 202 Gene3D G3DSA:1.20.1440.20 23 202 4.1E-69 T 14-10-2018 IPR023353 LemA-like domain superfamily JO40_07940 8874437540f551412330de95ee29d029 202 Pfam PF04011 LemA family 10 202 4.2E-73 T 14-10-2018 IPR007156 LemA JO40_13260 016d26f196056f8bf99506ce50039e27 304 SUPERFAMILY SSF81345 8 266 3.14E-29 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_13260 016d26f196056f8bf99506ce50039e27 304 Gene3D G3DSA:1.10.3470.10 11 279 2.0E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_13260 016d26f196056f8bf99506ce50039e27 304 Pfam PF00950 ABC 3 transport family 11 275 2.6E-75 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 JO40_12060 e8d4a5e6690bf3e0d212cc901f834301 200 SUPERFAMILY SSF54211 2 125 3.79E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_12060 e8d4a5e6690bf3e0d212cc901f834301 200 Pfam PF01205 Uncharacterized protein family UPF0029 15 120 2.0E-26 T 14-10-2018 IPR001498 Impact, N-terminal JO40_12060 e8d4a5e6690bf3e0d212cc901f834301 200 SUPERFAMILY SSF54980 133 196 1.01E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_12060 e8d4a5e6690bf3e0d212cc901f834301 200 Gene3D G3DSA:3.30.230.30 1 128 4.4E-43 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily JO40_12060 e8d4a5e6690bf3e0d212cc901f834301 200 Pfam PF09186 Domain of unknown function (DUF1949) 137 190 2.8E-6 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal JO40_02725 ec772ad67de73c75a21b4ab655baa5d2 123 Pfam PF01850 PIN domain 3 110 2.7E-13 T 14-10-2018 IPR002716 PIN domain JO40_02725 ec772ad67de73c75a21b4ab655baa5d2 123 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 121 10.41 T 14-10-2018 IPR022907 VapC family GO:0004540 JO40_02725 ec772ad67de73c75a21b4ab655baa5d2 123 Gene3D G3DSA:3.40.50.1010 3 122 1.5E-24 T 14-10-2018 JO40_02725 ec772ad67de73c75a21b4ab655baa5d2 123 SUPERFAMILY SSF88723 1 121 9.25E-27 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_09185 9dff07c9dc51ae2243e3c64a145c3271 134 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 108 1.9E-15 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system JO40_09185 9dff07c9dc51ae2243e3c64a145c3271 134 SUPERFAMILY SSF143100 5 66 2.62E-15 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO40_09185 9dff07c9dc51ae2243e3c64a145c3271 134 Gene3D G3DSA:3.30.160.250 1 96 1.0E-18 T 14-10-2018 JO40_07840 529dab81fd65488bb7f396868c61426a 868 SMART SM00382 198 342 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07840 529dab81fd65488bb7f396868c61426a 868 SMART SM00382 601 749 6.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07840 529dab81fd65488bb7f396868c61426a 868 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 846 6.2E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_07840 529dab81fd65488bb7f396868c61426a 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 1.6E-13 T 14-10-2018 IPR004176 Clp, N-terminal JO40_07840 529dab81fd65488bb7f396868c61426a 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.0E-10 T 14-10-2018 IPR004176 Clp, N-terminal JO40_07840 529dab81fd65488bb7f396868c61426a 868 Gene3D G3DSA:3.40.50.300 149 342 5.3E-75 T 14-10-2018 JO40_07840 529dab81fd65488bb7f396868c61426a 868 Gene3D G3DSA:3.40.50.300 554 766 2.0E-86 T 14-10-2018 JO40_07840 529dab81fd65488bb7f396868c61426a 868 SUPERFAMILY SSF81923 4 156 9.61E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO40_07840 529dab81fd65488bb7f396868c61426a 868 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JO40_07840 529dab81fd65488bb7f396868c61426a 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 3.6E-40 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_07840 529dab81fd65488bb7f396868c61426a 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 3.6E-40 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_07840 529dab81fd65488bb7f396868c61426a 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 3.6E-40 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_07840 529dab81fd65488bb7f396868c61426a 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 3.6E-40 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_07840 529dab81fd65488bb7f396868c61426a 868 SUPERFAMILY SSF52540 550 854 2.72E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07840 529dab81fd65488bb7f396868c61426a 868 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 856 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 JO40_07840 529dab81fd65488bb7f396868c61426a 868 Gene3D G3DSA:3.40.50.300 343 548 4.7E-70 T 14-10-2018 JO40_07840 529dab81fd65488bb7f396868c61426a 868 SUPERFAMILY SSF52540 160 549 7.64E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07840 529dab81fd65488bb7f396868c61426a 868 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 334 1.6E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_07840 529dab81fd65488bb7f396868c61426a 868 SMART SM01086 767 856 8.3E-39 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_07840 529dab81fd65488bb7f396868c61426a 868 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 JO40_07840 529dab81fd65488bb7f396868c61426a 868 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 761 4.3E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_07840 529dab81fd65488bb7f396868c61426a 868 Gene3D G3DSA:1.10.1780.10 1 148 3.1E-38 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO40_07840 529dab81fd65488bb7f396868c61426a 868 Gene3D G3DSA:1.10.8.60 767 861 1.8E-29 T 14-10-2018 JO40_13000 0b4f830bc474baa6e87de0d74508885e 451 Pfam PF01171 PP-loop family 27 210 5.7E-52 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JO40_13000 0b4f830bc474baa6e87de0d74508885e 451 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 26 213 1.7E-55 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JO40_13000 0b4f830bc474baa6e87de0d74508885e 451 SUPERFAMILY SSF56037 368 442 2.04E-6 T 14-10-2018 JO40_13000 0b4f830bc474baa6e87de0d74508885e 451 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 318 22.306 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JO40_13000 0b4f830bc474baa6e87de0d74508885e 451 Gene3D G3DSA:3.40.50.620 7 217 3.3E-58 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_13000 0b4f830bc474baa6e87de0d74508885e 451 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 386 429 1.0E-10 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JO40_13000 0b4f830bc474baa6e87de0d74508885e 451 SUPERFAMILY SSF52402 26 238 3.2E-45 T 14-10-2018 JO40_13345 7b193dacf8afa2731428a2898e2938f4 310 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 290 2.7E-76 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JO40_13345 7b193dacf8afa2731428a2898e2938f4 310 Gene3D G3DSA:3.40.50.450 19 297 1.2E-80 T 14-10-2018 JO40_13345 7b193dacf8afa2731428a2898e2938f4 310 Pfam PF02481 DNA recombination-mediator protein A 77 281 2.3E-71 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JO40_13345 7b193dacf8afa2731428a2898e2938f4 310 SUPERFAMILY SSF102405 83 287 1.68E-33 T 14-10-2018 JO40_10660 44a20dba8087f28e93c4e3f2e685003d 89 Gene3D G3DSA:1.20.58.110 1 89 5.4E-22 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10660 44a20dba8087f28e93c4e3f2e685003d 89 Pfam PF01649 Ribosomal protein S20 3 80 1.2E-21 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10660 44a20dba8087f28e93c4e3f2e685003d 89 SUPERFAMILY SSF46992 3 85 5.36E-24 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10660 44a20dba8087f28e93c4e3f2e685003d 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 84 14.605 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10660 44a20dba8087f28e93c4e3f2e685003d 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 79 1.9E-19 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10660 44a20dba8087f28e93c4e3f2e685003d 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 17 78 5.0E-9 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 Gene3D G3DSA:3.90.180.10 18 338 4.8E-105 T 14-10-2018 JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 128 1.5E-13 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 Gene3D G3DSA:3.40.50.720 162 292 4.8E-105 T 14-10-2018 JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 SUPERFAMILY SSF50129 1 182 5.37E-45 T 14-10-2018 IPR011032 GroES-like superfamily JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 SMART SM00829 23 350 0.0028 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 Pfam PF00107 Zinc-binding dehydrogenase 177 269 5.2E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JO40_03945 5a6aa7425d259e4e283e72aa044e39af 351 SUPERFAMILY SSF51735 142 303 2.45E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_12900 16d8cda8c82a0daddd07ff3e86e8b5ea 185 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 29 184 5.0E-77 T 14-10-2018 IPR006340 Protein of unknown function DUF436 JO40_12900 16d8cda8c82a0daddd07ff3e86e8b5ea 185 SUPERFAMILY SSF110710 7 183 8.89E-75 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like JO40_12900 16d8cda8c82a0daddd07ff3e86e8b5ea 185 Gene3D G3DSA:3.40.50.10360 6 185 8.6E-79 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like JO40_12900 16d8cda8c82a0daddd07ff3e86e8b5ea 185 Pfam PF04260 Protein of unknown function (DUF436) 15 182 5.2E-75 T 14-10-2018 IPR006340 Protein of unknown function DUF436 JO40_12900 16d8cda8c82a0daddd07ff3e86e8b5ea 185 Hamap MF_00800 UPF0340 protein . 1 185 90.311 T 14-10-2018 IPR006340 Protein of unknown function DUF436 JO40_12900 16d8cda8c82a0daddd07ff3e86e8b5ea 185 PIRSF PIRSF007510 4 185 6.8E-78 T 14-10-2018 IPR006340 Protein of unknown function DUF436 JO40_12900 16d8cda8c82a0daddd07ff3e86e8b5ea 185 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 15 182 1.6E-73 T 14-10-2018 IPR006340 Protein of unknown function DUF436 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 171 2.8E-30 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 Gene3D G3DSA:3.40.50.720 231 415 9.7E-65 T 14-10-2018 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 398 1.5E-90 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 61 88 3.8E-5 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 3.8E-5 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 SUPERFAMILY SSF48179 200 296 9.01E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 Gene3D G3DSA:3.40.50.720 4 202 7.5E-59 T 14-10-2018 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 PIRSF PIRSF500134 4 370 3.8E-115 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 PIRSF PIRSF500134 364 415 0.23 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 SMART SM00984 326 414 2.9E-16 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 PIRSF PIRSF000124 4 415 4.8E-127 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 290 1.5E-25 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 Gene3D G3DSA:1.20.5.100 203 229 8.1E-18 T 14-10-2018 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 SUPERFAMILY SSF52413 320 415 1.14E-25 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 SUPERFAMILY SSF51735 5 203 1.1E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_09845 a9573b5f52c67b720ab135969c8cfb92 415 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 327 398 6.9E-8 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:1.10.150.390 1325 1387 2.4E-28 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1386 18.742 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 624 1.1E-20 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 SMART SM00663 224 503 3.6E-170 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:1.10.1790.20 1144 1323 1.1E-62 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:1.10.274.100 479 547 1.2E-17 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 SUPERFAMILY SSF64484 6 1376 0.0 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1376 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:2.40.50.100 1160 1224 1.1E-62 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 383 2.4E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Pfam PF00623 RNA polymerase Rpb1, domain 2 383 474 2.0E-26 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Pfam PF04998 RNA polymerase Rpb1, domain 5 735 1324 5.2E-75 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:1.10.40.90 363 405 9.0E-17 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:1.10.132.30 621 759 3.9E-59 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:1.10.274.100 548 620 6.8E-13 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Gene3D G3DSA:2.40.50.100 1042 1135 2.9E-23 T 14-10-2018 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Pfam PF05000 RNA polymerase Rpb1, domain 4 653 723 9.2E-14 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_00750 9aee2de9719a4967b98b898ee6676210 1424 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 2.1E-89 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_12120 8a7b9eaaf2cd58834b2370bef814ef86 193 Pfam PF01300 Telomere recombination 17 178 6.3E-32 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 JO40_12120 8a7b9eaaf2cd58834b2370bef814ef86 193 Gene3D G3DSA:3.90.870.10 1 190 2.3E-42 T 14-10-2018 JO40_12120 8a7b9eaaf2cd58834b2370bef814ef86 193 SUPERFAMILY SSF55821 7 182 1.89E-37 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JO40_05380 492de82ce188f9c541e91dde4733b64e 293 SUPERFAMILY SSF53223 1 121 2.59E-39 T 14-10-2018 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 Gene3D G3DSA:3.40.50.720 6 266 2.1E-114 T 14-10-2018 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 3.9E-40 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 SUPERFAMILY SSF51735 122 289 8.57E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_05380 492de82ce188f9c541e91dde4733b64e 293 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.3E-83 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 3.3E-83 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 3.3E-83 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 3.3E-83 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 3.3E-83 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 3.3E-83 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 3.3E-83 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 Gene3D G3DSA:3.40.50.10860 8 283 2.1E-114 T 14-10-2018 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 289 4.1E-70 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_05380 492de82ce188f9c541e91dde4733b64e 293 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 290 40.028 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO40_12185 d842b2e9cffe5f992e01e4780c57081a 315 Pfam PF03193 RsgA GTPase 67 245 3.2E-45 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 JO40_12185 d842b2e9cffe5f992e01e4780c57081a 315 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 44 301 4.5E-57 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JO40_12185 d842b2e9cffe5f992e01e4780c57081a 315 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 312 29.191 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JO40_12185 d842b2e9cffe5f992e01e4780c57081a 315 Gene3D G3DSA:3.40.50.300 69 246 3.9E-44 T 14-10-2018 JO40_12185 d842b2e9cffe5f992e01e4780c57081a 315 SUPERFAMILY SSF50249 1 69 5.43E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_12185 d842b2e9cffe5f992e01e4780c57081a 315 Gene3D G3DSA:1.10.40.50 248 315 4.1E-17 T 14-10-2018 JO40_12185 d842b2e9cffe5f992e01e4780c57081a 315 SUPERFAMILY SSF52540 81 308 6.0E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05035 e0aca83ee3d4243d436a0bca00bbe513 238 Pfam PF04909 Amidohydrolase 98 228 4.9E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO40_05035 e0aca83ee3d4243d436a0bca00bbe513 238 SUPERFAMILY SSF51556 5 236 1.43E-16 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_05035 e0aca83ee3d4243d436a0bca00bbe513 238 Gene3D G3DSA:3.20.20.140 5 237 5.7E-23 T 14-10-2018 JO40_03025 1d19e0644cf8e90ab351e18535529b8c 100 Pfam PF13181 Tetratricopeptide repeat 4 34 2.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03025 1d19e0644cf8e90ab351e18535529b8c 100 Gene3D G3DSA:1.25.40.10 1 94 5.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03025 1d19e0644cf8e90ab351e18535529b8c 100 SUPERFAMILY SSF48452 2 67 1.14E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03025 1d19e0644cf8e90ab351e18535529b8c 100 SMART SM00028 40 73 45.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03025 1d19e0644cf8e90ab351e18535529b8c 100 SMART SM00028 3 36 0.031 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 Gene3D G3DSA:2.70.150.20 189 298 9.5E-30 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 Gene3D G3DSA:3.40.50.1000 366 637 7.6E-81 T 14-10-2018 IPR023214 HAD superfamily JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 144 689 7.4E-146 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 168 661 9.7E-73 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 SUPERFAMILY SSF81653 197 293 3.53E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 588 604 1.9E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 619 644 1.9E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 SUPERFAMILY SSF56784 383 686 4.32E-47 T 14-10-2018 IPR036412 HAD-like superfamily JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 Gene3D G3DSA:3.40.1110.10 396 519 7.6E-81 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 ProSitePatterns PS01229 Hypothetical cof family signature 2. 588 610 - T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 Pfam PF00122 E1-E2 ATPase 195 365 2.2E-36 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 387 393 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 545 1.4E-25 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 523 1.4E-25 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 588 607 1.4E-25 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 243 257 1.4E-25 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 623 1.4E-25 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 385 399 1.4E-25 T 14-10-2018 JO40_06050 5c702ce07e9f3715dfeed2397034b2ab 696 Pfam PF00702 haloacid dehalogenase-like hydrolase 382 602 4.0E-39 T 14-10-2018 JO40_02405 c06d35d55718e22ae54c7c66fd9c3441 131 SUPERFAMILY SSF52821 7 118 5.24E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO40_02405 c06d35d55718e22ae54c7c66fd9c3441 131 SMART SM00450 35 131 2.2E-17 T 14-10-2018 IPR001763 Rhodanese-like domain JO40_02405 c06d35d55718e22ae54c7c66fd9c3441 131 Pfam PF00581 Rhodanese-like domain 42 121 1.1E-13 T 14-10-2018 IPR001763 Rhodanese-like domain JO40_02405 c06d35d55718e22ae54c7c66fd9c3441 131 Gene3D G3DSA:3.40.250.10 37 131 2.2E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO40_07485 b572bf50c1962d9a46f86c3586c010b6 358 Pfam PF01476 LysM domain 310 356 3.1E-8 T 14-10-2018 IPR018392 LysM domain JO40_07485 b572bf50c1962d9a46f86c3586c010b6 358 Gene3D G3DSA:2.60.34.10 1 125 5.3E-11 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO40_07485 b572bf50c1962d9a46f86c3586c010b6 358 SMART SM00257 309 356 1.1E-8 T 14-10-2018 IPR018392 LysM domain JO40_07485 b572bf50c1962d9a46f86c3586c010b6 358 Gene3D G3DSA:3.10.350.10 303 358 4.8E-11 T 14-10-2018 IPR036779 LysM domain superfamily JO40_07485 b572bf50c1962d9a46f86c3586c010b6 358 SUPERFAMILY SSF54106 308 356 1.09E-6 T 14-10-2018 JO40_07485 b572bf50c1962d9a46f86c3586c010b6 358 SUPERFAMILY SSF100920 4 119 1.14E-11 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Hamap MF_00974 DNA primase [dnaG]. 3 580 26.118 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 SMART SM00400 35 89 8.7E-32 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Pfam PF13155 Toprim-like 260 344 6.2E-18 T 14-10-2018 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 SUPERFAMILY SSF56731 115 420 2.35E-92 T 14-10-2018 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Gene3D G3DSA:3.40.1360.10 239 361 2.8E-38 T 14-10-2018 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Gene3D G3DSA:3.90.580.10 2 99 5.2E-38 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 PIRSF PIRSF002811 1 583 3.1E-169 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Pfam PF08275 DNA primase catalytic core, N-terminal domain 130 249 2.0E-35 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 4.3E-136 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Gene3D G3DSA:3.90.980.10 109 238 3.0E-35 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 SUPERFAMILY SSF57783 1 96 8.5E-35 T 14-10-2018 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Pfam PF10410 DnaB-helicase binding domain of primase 365 419 1.7E-9 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 SMART SM00493 257 328 7.6E-21 T 14-10-2018 IPR006171 TOPRIM domain JO40_12300 330fd9e4da17e8b82b2f0bce16481b89 585 Pfam PF01807 CHC2 zinc finger 5 98 5.6E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JO40_00220 1a9c167f306528709c8068faa6dcabc0 388 Pfam PF00266 Aminotransferase class-V 5 375 5.3E-71 T 14-10-2018 IPR000192 Aminotransferase class V domain JO40_00220 1a9c167f306528709c8068faa6dcabc0 388 Gene3D G3DSA:3.40.640.10 19 274 9.7E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_00220 1a9c167f306528709c8068faa6dcabc0 388 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 5 384 5.9E-122 T 14-10-2018 IPR010969 Cysteine desulfurase-related, unknown function JO40_00220 1a9c167f306528709c8068faa6dcabc0 388 Gene3D G3DSA:3.90.1150.10 5 378 9.7E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_00220 1a9c167f306528709c8068faa6dcabc0 388 PIRSF PIRSF005572 2 388 1.1E-50 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JO40_00220 1a9c167f306528709c8068faa6dcabc0 388 SUPERFAMILY SSF53383 2 385 6.05E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 641 37.816 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 Pfam PF00012 Hsp70 protein 4 598 5.1E-268 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 Gene3D G3DSA:1.20.1270.10 518 601 7.7E-27 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 SUPERFAMILY SSF53067 184 376 9.07E-70 T 14-10-2018 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 SUPERFAMILY SSF100920 378 534 1.57E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 Gene3D G3DSA:3.90.640.10 223 310 5.3E-156 T 14-10-2018 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 0.0 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 Gene3D G3DSA:3.30.420.40 5 373 5.3E-156 T 14-10-2018 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 Gene3D G3DSA:2.60.34.10 378 517 2.1E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 Gene3D G3DSA:3.30.420.40 177 360 5.3E-156 T 14-10-2018 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 135 155 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 359 379 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 196 206 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 382 401 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 463 479 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 PRINTS PR00301 70kDa heat shock protein signature 328 344 9.9E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 SUPERFAMILY SSF53067 1 180 3.17E-61 T 14-10-2018 JO40_02595 dc932a8038f1557637f1c9fef4c09fd5 647 SUPERFAMILY SSF100934 501 603 1.43E-17 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 164 184 6.9E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 185 203 6.9E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 6.9E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 6.9E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 ProSitePatterns PS00905 GTP1/OBG family signature. 215 228 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 SUPERFAMILY SSF82051 3 159 9.42E-48 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 Pfam PF01018 GTP1/OBG 6 159 2.9E-52 T 14-10-2018 IPR006169 GTP1/OBG domain JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 326 4.5E-123 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 Gene3D G3DSA:2.70.210.12 1 160 2.1E-49 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 SUPERFAMILY SSF52540 153 332 4.68E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 Gene3D G3DSA:3.40.50.300 162 366 3.5E-45 T 14-10-2018 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 Pfam PF01926 50S ribosome-binding GTPase 163 283 1.3E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 PIRSF PIRSF002401 1 375 9.1E-130 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type JO40_10460 7b6e641ca35f4275124f703a84bfa129 382 Hamap MF_01454 GTPase Obg [obg]. 3 328 43.125 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JO40_02305 41fb9775e1e8701f0b182bf529c9f890 208 Pfam PF00297 Ribosomal protein L3 96 178 4.7E-14 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02305 41fb9775e1e8701f0b182bf529c9f890 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 201 2.5E-77 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02305 41fb9775e1e8701f0b182bf529c9f890 208 Gene3D G3DSA:2.40.30.10 129 207 1.5E-15 T 14-10-2018 JO40_02305 41fb9775e1e8701f0b182bf529c9f890 208 SUPERFAMILY SSF50447 1 206 7.77E-70 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_02305 41fb9775e1e8701f0b182bf529c9f890 208 Gene3D G3DSA:2.40.50.620 32 93 2.9E-8 T 14-10-2018 JO40_02305 41fb9775e1e8701f0b182bf529c9f890 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 204 34.718 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02305 41fb9775e1e8701f0b182bf529c9f890 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 99 122 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 SUPERFAMILY SSF52954 340 446 2.57E-33 T 14-10-2018 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 140 319 1.9E-11 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 7 228 1.1E-87 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 SUPERFAMILY SSF55681 7 356 7.35E-119 T 14-10-2018 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 Pfam PF03129 Anticodon binding domain 354 442 1.6E-21 T 14-10-2018 IPR004154 Anticodon-binding JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 Gene3D G3DSA:3.40.50.800 348 450 3.6E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 5 445 51.625 T 14-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 Gene3D G3DSA:3.30.930.10 8 347 1.9E-131 T 14-10-2018 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 147 164 3.9E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 27 41 3.9E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 390 409 3.9E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 196 206 3.9E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 304 316 3.9E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 179 196 3.9E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_05415 3a5a422bfa5a52a871fd56840ddf6896 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 126 138 3.9E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 Gene3D G3DSA:1.25.40.10 1 45 5.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 Pfam PF13432 Tetratricopeptide repeat 2 52 9.8E-4 T 14-10-2018 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 Pfam PF00515 Tetratricopeptide repeat 93 126 9.1E-12 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 SUPERFAMILY SSF48452 2 126 5.88E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 SMART SM00028 24 57 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 SMART SM00028 93 126 1.7E-9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 SMART SM00028 59 92 0.023 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 Pfam PF13181 Tetratricopeptide repeat 66 92 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06460 9a1523ab7acc11afd4be0eb374b59fb7 152 Gene3D G3DSA:1.25.40.10 46 152 1.8E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_00070 978e042c2faee63540bf5514ae2f8a6c 185 Gene3D G3DSA:1.10.132.20 12 182 2.8E-67 T 14-10-2018 JO40_00070 978e042c2faee63540bf5514ae2f8a6c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.872 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JO40_00070 978e042c2faee63540bf5514ae2f8a6c 185 Gene3D G3DSA:3.30.1360.40 31 105 2.8E-67 T 14-10-2018 JO40_00070 978e042c2faee63540bf5514ae2f8a6c 185 Pfam PF01765 Ribosome recycling factor 20 183 1.4E-61 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 JO40_00070 978e042c2faee63540bf5514ae2f8a6c 185 SUPERFAMILY SSF55194 1 184 4.06E-68 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 JO40_00070 978e042c2faee63540bf5514ae2f8a6c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 1.0E-68 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 SUPERFAMILY SSF53784 46 435 6.8E-116 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 Pfam PF00365 Phosphofructokinase 80 385 1.4E-59 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 PIRSF PIRSF000534 1 438 1.2E-193 T 14-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 Hamap MF_01981 ATP-dependent 6-phosphofructokinase [pfkA]. 4 437 52.843 T 14-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 Gene3D G3DSA:3.40.50.450 73 267 1.3E-56 T 14-10-2018 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 169 185 2.0E-22 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 298 310 2.0E-22 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 257 2.0E-22 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 202 219 2.0E-22 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 81 100 2.0E-22 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_06325 602222d19b571d1baf9ab16c11fd32f8 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 220 238 2.0E-22 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_00300 a13f7673aac9eb2a098159cd001d2669 162 SUPERFAMILY SSF52218 25 105 1.92E-9 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_00300 a13f7673aac9eb2a098159cd001d2669 162 Gene3D G3DSA:3.40.50.360 9 159 1.8E-12 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_07425 2425713693d99682f6dbc88588af4aa7 470 Pfam PF04055 Radical SAM superfamily 116 250 1.1E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_07425 2425713693d99682f6dbc88588af4aa7 470 Gene3D G3DSA:3.20.20.70 110 408 1.3E-39 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_07425 2425713693d99682f6dbc88588af4aa7 470 SUPERFAMILY SSF102114 109 393 7.26E-51 T 14-10-2018 JO40_07425 2425713693d99682f6dbc88588af4aa7 470 Pfam PF13394 4Fe-4S single cluster domain 117 192 2.4E-6 T 14-10-2018 JO40_03555 0aadfbd1cd2fcbeadc2210f7d36eee74 186 Gene3D G3DSA:1.20.120.490 66 185 3.1E-26 T 14-10-2018 IPR024042 TM1646-like domain superfamily JO40_03555 0aadfbd1cd2fcbeadc2210f7d36eee74 186 SUPERFAMILY SSF158397 73 185 1.83E-25 T 14-10-2018 IPR024042 TM1646-like domain superfamily JO40_03555 0aadfbd1cd2fcbeadc2210f7d36eee74 186 Pfam PF03885 Protein of unknown function (DUF327) 26 185 3.7E-36 T 14-10-2018 IPR005585 Protein of unknown function DUF327 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SMART SM00387 255 378 3.5E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Pfam PF00072 Response regulator receiver domain 561 670 3.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Pfam PF00072 Response regulator receiver domain 397 505 3.4E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SUPERFAMILY SSF52172 555 674 1.24E-35 T 14-10-2018 IPR011006 CheY-like superfamily JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Gene3D G3DSA:1.10.287.130 118 206 3.7E-25 T 14-10-2018 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Gene3D G3DSA:3.30.565.10 207 380 1.1E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SUPERFAMILY SSF52172 393 519 9.96E-19 T 14-10-2018 IPR011006 CheY-like superfamily JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SMART SM00448 559 670 2.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SMART SM00448 394 514 1.9E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 208 1.7E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SMART SM00388 143 208 2.1E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Gene3D G3DSA:3.40.50.2300 539 677 4.4E-37 T 14-10-2018 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Gene3D G3DSA:3.40.50.2300 381 521 1.0E-22 T 14-10-2018 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SUPERFAMILY SSF47384 129 210 7.46E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 SUPERFAMILY SSF55874 197 379 1.7E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 376 9.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 375 6.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 6.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 331 6.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_00710 6512d53d7a11be22a41d66301763d3b6 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 6.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_02040 985eae8339bdd63d21f4f76b1812fb12 395 Gene3D G3DSA:3.40.225.10 213 383 4.8E-9 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JO40_02040 985eae8339bdd63d21f4f76b1812fb12 395 Gene3D G3DSA:3.40.225.10 2 204 2.2E-51 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JO40_02040 985eae8339bdd63d21f4f76b1812fb12 395 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 182 2.3E-41 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal JO40_02040 985eae8339bdd63d21f4f76b1812fb12 395 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 230 356 8.7E-5 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal JO40_02040 985eae8339bdd63d21f4f76b1812fb12 395 SUPERFAMILY SSF53639 2 187 1.96E-44 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JO40_02040 985eae8339bdd63d21f4f76b1812fb12 395 SMART SM01007 8 185 2.5E-45 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal JO40_02040 985eae8339bdd63d21f4f76b1812fb12 395 SUPERFAMILY SSF53639 192 381 1.0E-15 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JO40_09880 1ba941216ecc58df926e87b81e5a027c 141 Gene3D G3DSA:1.20.120.330 5 139 1.2E-29 T 14-10-2018 JO40_09880 1ba941216ecc58df926e87b81e5a027c 141 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 9 135 1.6E-31 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 JO40_09880 1ba941216ecc58df926e87b81e5a027c 141 SUPERFAMILY SSF81593 4 134 2.9E-33 T 14-10-2018 JO40_09880 1ba941216ecc58df926e87b81e5a027c 141 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 10 135 9.1E-24 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 28.55 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 SUPERFAMILY SSF46785 11 80 1.74E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 SUPERFAMILY SSF51735 83 207 2.56E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 SMART SM00881 80 181 1.4E-15 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 Gene3D G3DSA:3.40.50.720 80 210 4.4E-41 T 14-10-2018 JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 Gene3D G3DSA:1.10.10.10 1 79 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 Pfam PF06971 Putative DNA-binding protein N-terminus 9 53 3.9E-15 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 JO40_08775 ebf945cf9ab5241c5fc89b325d4cbdf6 210 Pfam PF02629 CoA binding domain 83 179 6.3E-22 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JO40_05405 4549bcdc191b875416b395c2fa7f189c 176 SMART SM00257 79 131 6.1E-4 T 14-10-2018 IPR018392 LysM domain JO40_05405 4549bcdc191b875416b395c2fa7f189c 176 Pfam PF01476 LysM domain 80 131 5.3E-7 T 14-10-2018 IPR018392 LysM domain JO40_05405 4549bcdc191b875416b395c2fa7f189c 176 Gene3D G3DSA:3.10.350.10 69 134 8.3E-9 T 14-10-2018 IPR036779 LysM domain superfamily JO40_05820 f23f5bc25b669468abb184da0e79501c 359 SUPERFAMILY SSF53383 9 346 6.36E-63 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_05820 f23f5bc25b669468abb184da0e79501c 359 Gene3D G3DSA:3.40.640.10 28 249 2.3E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_05820 f23f5bc25b669468abb184da0e79501c 359 Gene3D G3DSA:3.90.1150.10 18 345 2.3E-94 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_05820 f23f5bc25b669468abb184da0e79501c 359 Pfam PF00155 Aminotransferase class I and II 16 339 3.9E-41 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO40_00085 6398965d27165b8f7c9e8cba1c8b4dd5 205 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 197 3.2E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO40_00085 6398965d27165b8f7c9e8cba1c8b4dd5 205 SUPERFAMILY SSF52972 2 199 2.49E-52 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO40_00085 6398965d27165b8f7c9e8cba1c8b4dd5 205 Hamap MF_00528 Septum formation protein Maf [maf]. 3 204 27.648 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO40_00085 6398965d27165b8f7c9e8cba1c8b4dd5 205 Pfam PF02545 Maf-like protein 4 199 5.7E-51 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO40_00085 6398965d27165b8f7c9e8cba1c8b4dd5 205 PIRSF PIRSF006305 1 205 3.9E-60 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO40_00085 6398965d27165b8f7c9e8cba1c8b4dd5 205 Gene3D G3DSA:3.90.950.10 2 205 1.9E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO40_00530 9947ca263b427df97ae4968453bec2e9 259 SUPERFAMILY SSF102705 1 255 2.09E-62 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily JO40_00530 9947ca263b427df97ae4968453bec2e9 259 Gene3D G3DSA:3.40.1390.30 20 243 6.7E-73 T 14-10-2018 JO40_00530 9947ca263b427df97ae4968453bec2e9 259 Gene3D G3DSA:3.40.1390.30 99 230 6.7E-73 T 14-10-2018 JO40_00530 9947ca263b427df97ae4968453bec2e9 259 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 20 243 2.8E-55 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JO40_00530 9947ca263b427df97ae4968453bec2e9 259 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 257 1.3E-52 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JO40_11115 1e8b19ff969005154bfbd9f11f21eb55 200 SUPERFAMILY SSF53098 2 194 7.13E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO40_11115 1e8b19ff969005154bfbd9f11f21eb55 200 Pfam PF01351 Ribonuclease HII 3 192 2.0E-30 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain JO40_11115 1e8b19ff969005154bfbd9f11f21eb55 200 Gene3D G3DSA:3.30.420.10 1 200 4.4E-65 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO40_11115 1e8b19ff969005154bfbd9f11f21eb55 200 Hamap MF_00052_B Ribonuclease HII [rnhB]. 1 196 31.767 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Gene3D G3DSA:1.25.40.10 106 173 1.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 73 106 1.0E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 5 38 29.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 107 140 0.04 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 39 72 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SUPERFAMILY SSF48452 4 171 1.57E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Pfam PF13414 TPR repeat 18 51 2.6E-6 T 14-10-2018 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Gene3D G3DSA:1.25.40.10 1 105 1.4E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11050 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Pfam PF13432 Tetratricopeptide repeat 79 138 3.8E-10 T 14-10-2018 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 Gene3D G3DSA:3.40.1190.20 214 495 9.0E-68 T 14-10-2018 IPR029056 Ribokinase-like JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 215 489 3.9E-53 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 PIRSF PIRSF017184 4 498 7.6E-111 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 Pfam PF01256 Carbohydrate kinase 242 485 3.8E-44 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 217 496 17.561 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 434 444 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 Gene3D G3DSA:3.40.50.10260 2 209 4.8E-47 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 Pfam PF03853 YjeF-related protein N-terminus 25 182 3.9E-33 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 SUPERFAMILY SSF64153 8 240 3.66E-45 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 203 20.036 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 9 204 5.2E-43 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JO40_09480 16bd16c422313839d6f0ee59d9f8c15e 504 SUPERFAMILY SSF53613 219 488 2.07E-43 T 14-10-2018 IPR029056 Ribokinase-like JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 26.568 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 Pfam PF01330 RuvA N terminal domain 1 62 1.3E-15 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 Gene3D G3DSA:1.10.150.20 67 139 4.9E-24 T 14-10-2018 JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 Gene3D G3DSA:2.40.50.140 1 66 8.0E-17 T 14-10-2018 JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 SUPERFAMILY SSF47781 66 135 1.19E-19 T 14-10-2018 IPR010994 RuvA domain 2-like JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 182 8.6E-43 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.3E-16 T 14-10-2018 JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 SUPERFAMILY SSF50249 1 63 1.31E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 SMART SM00278 73 92 5.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JO40_10080 6d43fe435966df8dcd483b2e7ef07ce9 201 SMART SM00278 108 127 0.31 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 SMART SM00052 745 987 3.3E-19 T 14-10-2018 IPR001633 EAL domain JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 571 729 5.9E-26 T 14-10-2018 IPR000160 GGDEF domain JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 SUPERFAMILY SSF55073 579 733 4.79E-31 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 Pfam PF00563 EAL domain 751 982 2.2E-39 T 14-10-2018 IPR001633 EAL domain JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 SMART SM00267 563 735 1.2E-21 T 14-10-2018 IPR000160 GGDEF domain JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 Gene3D G3DSA:3.30.70.270 562 735 3.0E-31 T 14-10-2018 JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 Gene3D G3DSA:3.20.20.450 739 992 2.3E-46 T 14-10-2018 IPR035919 EAL domain superfamily JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 Pfam PF00990 Diguanylate cyclase, GGDEF domain 575 727 2.9E-26 T 14-10-2018 IPR000160 GGDEF domain JO40_07755 0ccbc915b88ae49c0b3001a5bb358e7b 1004 SUPERFAMILY SSF141868 751 982 1.27E-46 T 14-10-2018 IPR035919 EAL domain superfamily JO40_10620 a3f7155b639f8342b6046300610d87df 511 SUPERFAMILY SSF54810 391 511 3.14E-51 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 7 193 4.0E-74 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JO40_10620 a3f7155b639f8342b6046300610d87df 511 Gene3D G3DSA:3.40.50.620 199 391 7.9E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_10620 a3f7155b639f8342b6046300610d87df 511 Pfam PF01171 PP-loop family 218 260 4.0E-5 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JO40_10620 a3f7155b639f8342b6046300610d87df 511 Gene3D G3DSA:3.40.50.880 3 198 1.3E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_10620 a3f7155b639f8342b6046300610d87df 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 1.6E-5 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.6E-5 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 78 89 1.6E-5 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 4 511 52.678 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 JO40_10620 a3f7155b639f8342b6046300610d87df 511 Gene3D G3DSA:3.30.300.10 392 511 1.6E-53 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 SUPERFAMILY SSF52317 5 226 3.53E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_10620 a3f7155b639f8342b6046300610d87df 511 Pfam PF00117 Glutamine amidotransferase class-I 9 189 7.8E-38 T 14-10-2018 IPR017926 Glutamine amidotransferase JO40_10620 a3f7155b639f8342b6046300610d87df 511 Pfam PF00958 GMP synthase C terminal domain 420 510 2.1E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JO40_10620 a3f7155b639f8342b6046300610d87df 511 SUPERFAMILY SSF52402 182 432 6.84E-52 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 7 21 5.5E-5 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 5.5E-5 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 94 5.5E-5 T 14-10-2018 JO40_10620 a3f7155b639f8342b6046300610d87df 511 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 511 4.5E-145 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JO40_09475 d10e81f32603505bd0035844f1310f18 662 Pfam PF02151 UvrB/uvrC motif 625 659 7.4E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO40_09475 d10e81f32603505bd0035844f1310f18 662 SUPERFAMILY SSF52540 35 589 1.16E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09475 d10e81f32603505bd0035844f1310f18 662 Gene3D G3DSA:3.40.50.300 412 593 3.2E-49 T 14-10-2018 JO40_09475 d10e81f32603505bd0035844f1310f18 662 Pfam PF00271 Helicase conserved C-terminal domain 429 542 2.3E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_09475 d10e81f32603505bd0035844f1310f18 662 SMART SM00490 457 543 2.8E-19 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_09475 d10e81f32603505bd0035844f1310f18 662 SUPERFAMILY SSF52540 1 412 6.6E-132 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09475 d10e81f32603505bd0035844f1310f18 662 Gene3D G3DSA:3.40.50.300 1 159 5.3E-70 T 14-10-2018 JO40_09475 d10e81f32603505bd0035844f1310f18 662 SUPERFAMILY SSF46600 614 659 2.09E-9 T 14-10-2018 IPR036876 UVR domain superfamily JO40_09475 d10e81f32603505bd0035844f1310f18 662 Pfam PF04851 Type III restriction enzyme, res subunit 14 86 3.9E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_09475 d10e81f32603505bd0035844f1310f18 662 Pfam PF12344 Ultra-violet resistance protein B 549 590 5.6E-23 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain JO40_09475 d10e81f32603505bd0035844f1310f18 662 Gene3D G3DSA:3.30.2060.10 160 243 2.1E-19 T 14-10-2018 JO40_09475 d10e81f32603505bd0035844f1310f18 662 SMART SM00487 8 422 3.2E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_09475 d10e81f32603505bd0035844f1310f18 662 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 658 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JO40_09475 d10e81f32603505bd0035844f1310f18 662 Gene3D G3DSA:3.40.50.300 253 411 6.4E-50 T 14-10-2018 JO40_09475 d10e81f32603505bd0035844f1310f18 662 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 660 42.632 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JO40_09475 d10e81f32603505bd0035844f1310f18 662 Gene3D G3DSA:4.10.860.10 613 661 7.4E-8 T 14-10-2018 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 103 9.1E-40 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 240 377 5.8E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 Gene3D G3DSA:3.30.300.10 105 381 4.9E-171 T 14-10-2018 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 388 57.349 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 266 274 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 SUPERFAMILY SSF55973 7 110 1.06E-42 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 Gene3D G3DSA:3.30.300.10 8 241 4.9E-171 T 14-10-2018 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 SUPERFAMILY SSF55973 117 239 2.35E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 PIRSF PIRSF000497 1 389 4.8E-172 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 Gene3D G3DSA:3.30.300.10 13 278 4.9E-171 T 14-10-2018 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 SUPERFAMILY SSF55973 240 388 1.61E-69 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 122 132 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 120 238 6.8E-43 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_00260 a5a408258a59fc167ae3f92bf9840e60 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 388 2.6E-182 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 Pfam PF00072 Response regulator receiver domain 5 112 1.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JO40_09260 cd48c22387455f0bca32c3d157b84773 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 Gene3D G3DSA:1.10.8.60 314 393 1.6E-26 T 14-10-2018 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 7.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 7.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 SUPERFAMILY SSF46689 356 445 1.28E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 SMART SM00448 3 114 5.5E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 SUPERFAMILY SSF52172 3 188 2.13E-48 T 14-10-2018 IPR011006 CheY-like superfamily JO40_09260 cd48c22387455f0bca32c3d157b84773 473 SUPERFAMILY SSF52540 142 386 7.3E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09260 cd48c22387455f0bca32c3d157b84773 473 SMART SM00382 163 310 3.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09260 cd48c22387455f0bca32c3d157b84773 473 Gene3D G3DSA:3.40.50.300 135 313 3.8E-68 T 14-10-2018 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 Pfam PF02954 Bacterial regulatory protein, Fis family 406 445 5.7E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 Gene3D G3DSA:1.10.10.60 400 447 4.7E-14 T 14-10-2018 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 Gene3D G3DSA:3.40.50.2300 1 134 1.5E-39 T 14-10-2018 JO40_09260 cd48c22387455f0bca32c3d157b84773 473 Pfam PF00158 Sigma-54 interaction domain 143 310 2.6E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO40_12845 7f98718717768de16bf7535827a6ecb8 515 Pfam PF08308 PEGA domain 256 316 2.4E-5 T 14-10-2018 IPR013229 PEGA JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 Pfam PF12838 4Fe-4S dicluster domain 156 199 2.7E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 Gene3D G3DSA:2.30.110.10 1 148 2.0E-31 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 SUPERFAMILY SSF50475 3 132 4.52E-13 T 14-10-2018 JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 185 196 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 Gene3D G3DSA:3.30.70.20 150 203 5.9E-17 T 14-10-2018 JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 157 168 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 7 80 2.6E-5 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JO40_09355 296687399d8959f08cac9eb7bd8b4e04 205 SUPERFAMILY SSF54862 151 201 3.63E-14 T 14-10-2018 JO40_04600 d971bb3da8112ba982fbe1e5dbd8b6d5 428 PRINTS PR00758 Arsenical pump membrane protein signature 279 303 1.4E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JO40_04600 d971bb3da8112ba982fbe1e5dbd8b6d5 428 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 1.4E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JO40_04600 d971bb3da8112ba982fbe1e5dbd8b6d5 428 PRINTS PR00758 Arsenical pump membrane protein signature 365 390 1.4E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JO40_04600 d971bb3da8112ba982fbe1e5dbd8b6d5 428 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 1.4E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JO40_04600 d971bb3da8112ba982fbe1e5dbd8b6d5 428 Pfam PF03600 Citrate transporter 18 356 2.8E-33 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 JO40_12965 fdae220463b2e4174abc39748ad0b477 366 Gene3D G3DSA:3.30.1330.10 24 190 4.1E-60 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_12965 fdae220463b2e4174abc39748ad0b477 366 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 27 353 2.5E-104 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12965 fdae220463b2e4174abc39748ad0b477 366 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 25 362 38.847 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12965 fdae220463b2e4174abc39748ad0b477 366 SUPERFAMILY SSF56042 193 357 1.31E-45 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_12965 fdae220463b2e4174abc39748ad0b477 366 Pfam PF02769 AIR synthase related protein, C-terminal domain 196 356 1.2E-21 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JO40_12965 fdae220463b2e4174abc39748ad0b477 366 SUPERFAMILY SSF55326 26 190 2.24E-43 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_12965 fdae220463b2e4174abc39748ad0b477 366 Gene3D G3DSA:3.90.650.10 191 359 2.9E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_12965 fdae220463b2e4174abc39748ad0b477 366 Pfam PF00586 AIR synthase related protein, N-terminal domain 81 184 3.4E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 Pfam PF02780 Transketolase, C-terminal domain 500 621 1.1E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 SUPERFAMILY SSF52922 490 625 6.28E-17 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 Gene3D G3DSA:3.40.50.970 314 487 6.8E-65 T 14-10-2018 JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 625 6.2E-201 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 Pfam PF02779 Transketolase, pyrimidine binding domain 316 479 1.4E-36 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 SUPERFAMILY SSF52518 5 379 7.67E-70 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 SMART SM00861 317 481 3.2E-60 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 SUPERFAMILY SSF52518 314 499 1.99E-54 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 Gene3D G3DSA:3.40.50.920 495 634 1.7E-18 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 7 282 5.7E-111 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 6 630 40.939 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 ProSitePatterns PS00801 Transketolase signature 1. 32 51 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_08780 d59bf16aaa950cc9b27f6135c9ae8779 651 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 PIRSF PIRSF000478 1 440 1.2E-169 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 Gene3D G3DSA:3.90.1170.30 336 426 2.1E-136 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 SUPERFAMILY SSF54680 337 440 3.27E-23 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 SMART SM00941 350 424 2.6E-21 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 Gene3D G3DSA:3.40.1030.10 82 335 2.1E-136 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 115 130 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 SUPERFAMILY SSF47648 17 74 1.23E-17 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 424 1.3E-21 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 423 3.6E-175 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 Gene3D G3DSA:1.20.970.10 1 73 1.1E-28 T 14-10-2018 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 71 2.1E-18 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 Pfam PF00591 Glycosyl transferase family, a/b domain 82 311 1.9E-41 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_01440 43fa2ce5f48c7ffb773c58a28c62f0f3 443 SUPERFAMILY SSF52418 74 328 9.68E-86 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 Pfam PF00270 DEAD/DEAH box helicase 13 164 1.3E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 Gene3D G3DSA:3.40.50.300 1 180 5.6E-74 T 14-10-2018 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 Gene3D G3DSA:3.40.50.300 182 359 7.7E-54 T 14-10-2018 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 SMART SM00487 4 188 7.0E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_10910 859ce2c131465678ed7d80ef66985d45 845 Gene3D G3DSA:1.20.120.1080 384 482 1.2E-10 T 14-10-2018 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 552 624 8.1E-9 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 SMART SM00847 401 493 2.3E-17 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 Pfam PF04408 Helicase associated domain (HA2) 402 477 5.4E-12 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JO40_10910 859ce2c131465678ed7d80ef66985d45 845 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 121 130 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site JO40_10910 859ce2c131465678ed7d80ef66985d45 845 SMART SM00490 242 341 1.6E-15 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_10910 859ce2c131465678ed7d80ef66985d45 845 SUPERFAMILY SSF52540 7 501 2.93E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10910 859ce2c131465678ed7d80ef66985d45 845 Pfam PF00271 Helicase conserved C-terminal domain 217 340 6.5E-15 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_06390 36274048a5dbd05cbcc7d2132e707148 449 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 1 424 2.0E-124 T 14-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola JO40_06390 36274048a5dbd05cbcc7d2132e707148 449 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 424 4.7E-122 T 14-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 59 73 5.6E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 132 146 5.6E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 316 327 5.6E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 236 246 5.6E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 92 105 5.6E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 162 335 2.9E-57 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 Gene3D G3DSA:3.40.50.1370 159 324 9.9E-143 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 SUPERFAMILY SSF53671 12 337 6.99E-106 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 15 338 84.01 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 16 337 4.1E-130 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 Gene3D G3DSA:3.40.50.1370 13 334 9.9E-143 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 61 68 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 143 154 3.5E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 273 282 3.5E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 302 325 3.5E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 61 80 3.5E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_00900 172334f0b62ce3cb1ef099ab5e37a59e 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 16 156 2.0E-47 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JO40_00960 71715c2576bcfc7c2984490b88301be8 338 Gene3D G3DSA:3.30.420.40 128 293 2.8E-114 T 14-10-2018 JO40_00960 71715c2576bcfc7c2984490b88301be8 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 2.8E-43 T 14-10-2018 IPR017861 Kae1/TsaD family JO40_00960 71715c2576bcfc7c2984490b88301be8 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.8E-43 T 14-10-2018 IPR017861 Kae1/TsaD family JO40_00960 71715c2576bcfc7c2984490b88301be8 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 2.8E-43 T 14-10-2018 IPR017861 Kae1/TsaD family JO40_00960 71715c2576bcfc7c2984490b88301be8 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.8E-43 T 14-10-2018 IPR017861 Kae1/TsaD family JO40_00960 71715c2576bcfc7c2984490b88301be8 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 2.8E-43 T 14-10-2018 IPR017861 Kae1/TsaD family JO40_00960 71715c2576bcfc7c2984490b88301be8 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.8E-43 T 14-10-2018 IPR017861 Kae1/TsaD family JO40_00960 71715c2576bcfc7c2984490b88301be8 338 SUPERFAMILY SSF53067 102 307 1.5E-38 T 14-10-2018 JO40_00960 71715c2576bcfc7c2984490b88301be8 338 SUPERFAMILY SSF53067 2 123 7.77E-30 T 14-10-2018 JO40_00960 71715c2576bcfc7c2984490b88301be8 338 Gene3D G3DSA:3.30.420.40 3 315 2.8E-114 T 14-10-2018 JO40_00960 71715c2576bcfc7c2984490b88301be8 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 8.2E-105 T 14-10-2018 IPR017861 Kae1/TsaD family JO40_00960 71715c2576bcfc7c2984490b88301be8 338 Pfam PF00814 Glycoprotease family 23 306 3.1E-91 T 14-10-2018 IPR000905 Gcp-like domain JO40_00960 71715c2576bcfc7c2984490b88301be8 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 6.7E-123 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JO40_00960 71715c2576bcfc7c2984490b88301be8 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 57.892 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JO40_01180 0ae942e27776460359a31346084d3f6e 792 Pfam PF07724 AAA domain (Cdc48 subfamily) 528 689 7.4E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_01180 0ae942e27776460359a31346084d3f6e 792 SMART SM01086 696 784 8.0E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_01180 0ae942e27776460359a31346084d3f6e 792 SUPERFAMILY SSF81923 9 142 3.14E-29 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO40_01180 0ae942e27776460359a31346084d3f6e 792 Gene3D G3DSA:1.10.1780.10 5 142 4.3E-23 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO40_01180 0ae942e27776460359a31346084d3f6e 792 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 575 593 1.3E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_01180 0ae942e27776460359a31346084d3f6e 792 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.3E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_01180 0ae942e27776460359a31346084d3f6e 792 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 651 1.3E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_01180 0ae942e27776460359a31346084d3f6e 792 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 1.3E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO40_01180 0ae942e27776460359a31346084d3f6e 792 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 560 578 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 JO40_01180 0ae942e27776460359a31346084d3f6e 792 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 7 777 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 JO40_01180 0ae942e27776460359a31346084d3f6e 792 Gene3D G3DSA:1.10.8.60 384 480 2.8E-29 T 14-10-2018 JO40_01180 0ae942e27776460359a31346084d3f6e 792 SUPERFAMILY SSF52540 478 776 3.51E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01180 0ae942e27776460359a31346084d3f6e 792 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 696 775 2.1E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_01180 0ae942e27776460359a31346084d3f6e 792 SUPERFAMILY SSF52540 197 449 1.47E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01180 0ae942e27776460359a31346084d3f6e 792 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 241 352 3.3E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_01180 0ae942e27776460359a31346084d3f6e 792 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 20 54 1.5E-4 T 14-10-2018 IPR004176 Clp, N-terminal JO40_01180 0ae942e27776460359a31346084d3f6e 792 Gene3D G3DSA:3.40.50.300 196 383 2.2E-62 T 14-10-2018 JO40_01180 0ae942e27776460359a31346084d3f6e 792 Gene3D G3DSA:3.40.50.300 482 694 9.5E-76 T 14-10-2018 JO40_01180 0ae942e27776460359a31346084d3f6e 792 SMART SM00382 236 379 7.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01180 0ae942e27776460359a31346084d3f6e 792 SMART SM00382 529 697 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01180 0ae942e27776460359a31346084d3f6e 792 Gene3D G3DSA:1.10.8.60 696 785 1.9E-19 T 14-10-2018 JO40_05280 b0c8b87e8caf974a37c07202cee9cd52 434 Pfam PF13581 Histidine kinase-like ATPase domain 171 294 3.1E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_05280 b0c8b87e8caf974a37c07202cee9cd52 434 Gene3D G3DSA:3.30.565.10 155 301 2.1E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_05280 b0c8b87e8caf974a37c07202cee9cd52 434 SUPERFAMILY SSF51206 308 414 4.06E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_05280 b0c8b87e8caf974a37c07202cee9cd52 434 SUPERFAMILY SSF55874 177 298 3.59E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_05280 b0c8b87e8caf974a37c07202cee9cd52 434 SMART SM00100 293 414 2.3E-5 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_05280 b0c8b87e8caf974a37c07202cee9cd52 434 Pfam PF00027 Cyclic nucleotide-binding domain 317 399 7.7E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_05280 b0c8b87e8caf974a37c07202cee9cd52 434 Gene3D G3DSA:2.60.120.10 302 426 1.9E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_01590 bc066989ba46d893b5295b59525ec64f 144 Gene3D G3DSA:2.70.40.10 2 143 1.4E-54 T 14-10-2018 IPR036157 dUTPase-like superfamily JO40_01590 bc066989ba46d893b5295b59525ec64f 144 Pfam PF00692 dUTPase 12 142 6.2E-31 T 14-10-2018 IPR029054 dUTPase-like JO40_01590 bc066989ba46d893b5295b59525ec64f 144 SUPERFAMILY SSF51283 4 143 5.1E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily JO40_01590 bc066989ba46d893b5295b59525ec64f 144 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 143 33.245 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 JO40_01590 bc066989ba46d893b5295b59525ec64f 144 TIGRFAM TIGR00576 dut: dUTP diphosphatase 4 142 4.3E-55 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 Gene3D G3DSA:3.30.70.1560 133 212 2.8E-43 T 14-10-2018 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 Pfam PF00849 RNA pseudouridylate synthase 66 193 4.4E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 SMART SM00363 5 73 5.0E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 Gene3D G3DSA:3.10.290.10 3 66 3.1E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 SUPERFAMILY SSF55120 65 229 1.04E-33 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 225 4.0E-38 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 Gene3D G3DSA:3.30.70.580 67 229 2.8E-43 T 14-10-2018 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 SUPERFAMILY SSF55174 4 89 2.19E-16 T 14-10-2018 JO40_06835 c077fe685ebdf88f68386fc3cca8dd48 234 Pfam PF01479 S4 domain 6 50 2.7E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 SMART SM00283 408 655 6.4E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 Gene3D G3DSA:3.30.450.20 151 289 8.6E-21 T 14-10-2018 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 Pfam PF02743 Cache domain 37 273 8.1E-24 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 SUPERFAMILY SSF103190 70 187 3.92E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 SUPERFAMILY SSF58104 333 435 2.07E-9 T 14-10-2018 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 SMART SM00304 311 365 4.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 5.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 583 612 5.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 535 564 5.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 533 5.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 SUPERFAMILY SSF58104 421 651 9.16E-46 T 14-10-2018 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 Gene3D G3DSA:1.10.287.950 312 431 4.6E-11 T 14-10-2018 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 Gene3D G3DSA:1.10.287.950 434 653 2.2E-43 T 14-10-2018 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 Pfam PF00672 HAMP domain 313 357 6.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_04680 ee4e80272194caabdfc4b7ee5a5d7edf 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 623 9.1E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_07585 43a092e02ead3637b418045c9fee3a06 596 SMART SM00382 384 570 8.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07585 43a092e02ead3637b418045c9fee3a06 596 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_07585 43a092e02ead3637b418045c9fee3a06 596 SUPERFAMILY SSF90123 9 342 2.62E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_07585 43a092e02ead3637b418045c9fee3a06 596 Gene3D G3DSA:1.20.1560.10 7 340 1.5E-68 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_07585 43a092e02ead3637b418045c9fee3a06 596 Pfam PF00664 ABC transporter transmembrane region 22 312 9.8E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_07585 43a092e02ead3637b418045c9fee3a06 596 SUPERFAMILY SSF52540 348 592 1.93E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07585 43a092e02ead3637b418045c9fee3a06 596 Pfam PF00005 ABC transporter 375 524 4.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_07585 43a092e02ead3637b418045c9fee3a06 596 Gene3D G3DSA:3.40.50.300 345 595 5.9E-91 T 14-10-2018 JO40_00200 b15a2053192b2c0aa2cb4d114a8e05bd 325 Gene3D G3DSA:1.10.3720.10 92 315 9.0E-20 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00200 b15a2053192b2c0aa2cb4d114a8e05bd 325 SUPERFAMILY SSF161098 96 309 2.49E-16 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00200 b15a2053192b2c0aa2cb4d114a8e05bd 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 322 7.5E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_04740 4b6cb01b3989414b04d506d9ea6e510e 245 SUPERFAMILY SSF51735 2 128 1.42E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_04740 4b6cb01b3989414b04d506d9ea6e510e 245 Gene3D G3DSA:3.40.50.720 1 135 4.7E-21 T 14-10-2018 JO40_04740 4b6cb01b3989414b04d506d9ea6e510e 245 SUPERFAMILY SSF116726 136 214 1.1E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_04740 4b6cb01b3989414b04d506d9ea6e510e 245 Pfam PF02080 TrkA-C domain 150 211 4.0E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO40_04740 4b6cb01b3989414b04d506d9ea6e510e 245 Pfam PF02254 TrkA-N domain 4 119 6.4E-16 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO40_04740 4b6cb01b3989414b04d506d9ea6e510e 245 Gene3D G3DSA:3.30.70.1450 141 217 1.2E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_06550 8784bf645776177d9796c58d7389599d 515 Gene3D G3DSA:2.60.40.10 411 506 3.6E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_06550 8784bf645776177d9796c58d7389599d 515 SMART SM00060 411 492 4.6E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 JO40_06550 8784bf645776177d9796c58d7389599d 515 Pfam PF00041 Fibronectin type III domain 419 488 1.4E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 JO40_06550 8784bf645776177d9796c58d7389599d 515 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 146 289 2.7E-7 T 14-10-2018 JO40_06550 8784bf645776177d9796c58d7389599d 515 Gene3D G3DSA:2.60.120.200 116 305 5.7E-9 T 14-10-2018 JO40_06550 8784bf645776177d9796c58d7389599d 515 SUPERFAMILY SSF49899 72 289 1.23E-13 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JO40_06550 8784bf645776177d9796c58d7389599d 515 SUPERFAMILY SSF49265 409 503 4.65E-11 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 JO40_08800 12b4c0dd84d8de4e359db90e23b8bd05 431 Pfam PF03313 Serine dehydratase alpha chain 90 425 8.4E-57 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit JO40_08800 12b4c0dd84d8de4e359db90e23b8bd05 431 PIRSF PIRSF006054 4 431 8.4E-130 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 JO40_08800 12b4c0dd84d8de4e359db90e23b8bd05 431 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 7 430 33.17 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 Pfam PF07497 Rho termination factor, RNA-binding domain 179 251 4.7E-29 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 SUPERFAMILY SSF50249 176 251 1.37E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 Pfam PF07498 Rho termination factor, N-terminal domain 130 174 1.5E-14 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 TIGRFAM TIGR00767 rho: transcription termination factor Rho 128 541 2.0E-215 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 284 487 2.4E-19 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 Gene3D G3DSA:3.40.50.300 257 541 1.9E-125 T 14-10-2018 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 SUPERFAMILY SSF52540 217 495 8.31E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 Hamap MF_01884 Transcription termination factor Rho [rho]. 128 543 220.558 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 SMART SM00357 179 245 3.5E-18 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 SMART SM00959 130 174 1.7E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 SUPERFAMILY SSF68912 128 174 3.73E-6 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 Gene3D G3DSA:1.10.720.10 125 173 9.2E-10 T 14-10-2018 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 Gene3D G3DSA:2.40.50.140 174 250 4.6E-32 T 14-10-2018 JO40_11780 5dd4e31a02f14ae8a7152238e5155034 548 SMART SM00382 294 488 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12980 3c391622aea040cf1022d8d479c83f84 373 SUPERFAMILY SSF48452 133 360 4.86E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12980 3c391622aea040cf1022d8d479c83f84 373 SMART SM00028 139 172 77.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12980 3c391622aea040cf1022d8d479c83f84 373 SMART SM00028 323 356 36.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12980 3c391622aea040cf1022d8d479c83f84 373 SMART SM00028 33 66 40.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12980 3c391622aea040cf1022d8d479c83f84 373 SUPERFAMILY SSF48452 31 210 1.39E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_09000 1c81ca736c78aa040b4640cdff60769e 297 SMART SM00729 78 283 5.4E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_09000 1c81ca736c78aa040b4640cdff60769e 297 Pfam PF04055 Radical SAM superfamily 85 240 1.3E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_09000 1c81ca736c78aa040b4640cdff60769e 297 Gene3D G3DSA:3.20.20.70 74 292 4.3E-35 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_09000 1c81ca736c78aa040b4640cdff60769e 297 PIRSF PIRSF004869 1 297 4.9E-80 T 14-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted JO40_09000 1c81ca736c78aa040b4640cdff60769e 297 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 14 297 2.3E-83 T 14-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme JO40_09000 1c81ca736c78aa040b4640cdff60769e 297 SUPERFAMILY SSF102114 56 288 2.49E-32 T 14-10-2018 JO40_03365 5a3daf81f31988a0ffb7ee8d20037b7a 222 Gene3D G3DSA:3.40.50.2300 6 132 6.3E-32 T 14-10-2018 JO40_03365 5a3daf81f31988a0ffb7ee8d20037b7a 222 SUPERFAMILY SSF52172 6 171 7.97E-35 T 14-10-2018 IPR011006 CheY-like superfamily JO40_03365 5a3daf81f31988a0ffb7ee8d20037b7a 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 220 1.1E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JO40_03365 5a3daf81f31988a0ffb7ee8d20037b7a 222 Pfam PF00072 Response regulator receiver domain 8 116 2.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_03365 5a3daf81f31988a0ffb7ee8d20037b7a 222 SMART SM00448 6 115 6.0E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_03365 5a3daf81f31988a0ffb7ee8d20037b7a 222 SMART SM00862 148 220 9.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JO40_03365 5a3daf81f31988a0ffb7ee8d20037b7a 222 Gene3D G3DSA:1.10.10.10 133 222 2.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_08565 80ec35a6bf97835c73ee0b4c68556ecd 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 252 6.8E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JO40_08565 80ec35a6bf97835c73ee0b4c68556ecd 256 Gene3D G3DSA:3.40.50.300 1 253 1.1E-60 T 14-10-2018 JO40_08565 80ec35a6bf97835c73ee0b4c68556ecd 256 SUPERFAMILY SSF52540 4 252 9.02E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08565 80ec35a6bf97835c73ee0b4c68556ecd 256 SMART SM00382 30 221 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08565 80ec35a6bf97835c73ee0b4c68556ecd 256 Pfam PF00005 ABC transporter 21 181 9.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 327 348 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 391 406 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 433 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 190 1.4E-60 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 331 438 1.7E-25 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PIRSF PIRSF000350 1 449 3.2E-74 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.7E-35 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 145 3.7E-35 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 3.7E-35 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 3.7E-35 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 3.7E-35 T 14-10-2018 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 Gene3D G3DSA:3.30.390.30 330 449 3.5E-33 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 Gene3D G3DSA:3.50.50.60 2 318 1.0E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 312 1.1E-69 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 SUPERFAMILY SSF55424 329 449 3.09E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 1 449 3.4E-140 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 SUPERFAMILY SSF51905 1 322 5.61E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_11460 4bc2fcea57437c0c5a76c3398d1bd4e0 453 Gene3D G3DSA:3.50.50.60 139 255 1.0E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 Gene3D G3DSA:1.10.1900.20 56 119 3.2E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 Pfam PF00453 Ribosomal protein L20 6 108 9.2E-40 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 24.832 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 Gene3D G3DSA:1.10.720.90 3 55 2.2E-13 T 14-10-2018 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.2E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-22 T 14-10-2018 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 SUPERFAMILY SSF74731 5 117 2.62E-40 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.1E-32 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.1E-32 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08820 dc8935434b5a9745ef5c3f18c82eacaf 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.1E-32 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_07165 b8e523801acbcd3409ffbdece88a381b 291 SUPERFAMILY SSF53474 48 273 3.33E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_07165 b8e523801acbcd3409ffbdece88a381b 291 Gene3D G3DSA:3.40.50.1820 98 290 3.1E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 Gene3D G3DSA:1.20.1480.50 1066 1161 3.8E-5 T 14-10-2018 JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 SUPERFAMILY SSF50939 59 278 6.87E-12 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 Gene3D G3DSA:2.120.10.10 29 298 8.5E-9 T 14-10-2018 JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 SMART SM00304 1104 1161 0.002 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 SMART SM00331 1195 1418 7.4E-45 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 1222 1371 3.2E-23 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 SUPERFAMILY SSF81606 1206 1368 3.92E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_01125 339efa3035cb5f079c42bcdac4da376e 1533 Gene3D G3DSA:3.60.40.10 1162 1405 2.0E-40 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_04010 362052dcaceb7be3514c94f4fa317ee9 352 SUPERFAMILY SSF140931 85 279 4.58E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_04010 362052dcaceb7be3514c94f4fa317ee9 352 Pfam PF02661 Fic/DOC family 108 215 2.2E-14 T 14-10-2018 IPR003812 Fido domain JO40_04010 362052dcaceb7be3514c94f4fa317ee9 352 Gene3D G3DSA:1.10.3290.10 22 294 1.5E-48 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 SUPERFAMILY SSF101821 86 213 6.77E-35 T 14-10-2018 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 Gene3D G3DSA:3.40.630.10 6 428 3.2E-156 T 14-10-2018 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 Gene3D G3DSA:2.30.250.10 84 217 3.2E-156 T 14-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 74 90 7.4E-44 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 7.4E-44 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 307 323 7.4E-44 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 396 411 7.4E-44 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 145 162 7.4E-44 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 108 128 7.4E-44 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 10 429 1.9E-126 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_01485 b77b416d5c770045490ae629efd4d8e7 430 SUPERFAMILY SSF53187 2 430 8.37E-96 T 14-10-2018 JO40_04655 37759574df2b96361265407c89d1e80a 299 Pfam PF00962 Adenosine/AMP deaminase 147 278 1.4E-25 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 JO40_04655 37759574df2b96361265407c89d1e80a 299 SUPERFAMILY SSF51556 11 282 1.61E-46 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_04655 37759574df2b96361265407c89d1e80a 299 Gene3D G3DSA:3.20.20.140 1 297 2.7E-45 T 14-10-2018 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 SUPERFAMILY SSF53067 8 264 1.97E-53 T 14-10-2018 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Gene3D G3DSA:3.30.420.40 105 250 7.1E-71 T 14-10-2018 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Gene3D G3DSA:3.30.420.40 472 615 2.4E-81 T 14-10-2018 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Gene3D G3DSA:3.30.420.40 10 265 7.1E-71 T 14-10-2018 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 759 979 4.5E-81 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 265 1.2E-25 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 378 632 5.3E-34 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 994 1312 5.0E-47 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 SUPERFAMILY SSF53067 377 632 6.79E-49 T 14-10-2018 JO40_10720 41e1e7e470cb9bd52add69088b935859 1501 Gene3D G3DSA:3.30.420.40 378 632 2.4E-81 T 14-10-2018 JO40_05075 ece1932d406c67df3847895120b29a8e 459 PIRSF PIRSF006603 7 456 2.3E-69 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_05075 ece1932d406c67df3847895120b29a8e 459 Pfam PF01554 MatE 32 190 9.1E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_05075 ece1932d406c67df3847895120b29a8e 459 Pfam PF01554 MatE 252 411 1.2E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_05075 ece1932d406c67df3847895120b29a8e 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 415 5.2E-51 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 Gene3D G3DSA:2.40.100.10 52 202 3.9E-61 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 Gene3D G3DSA:3.10.50.40 213 360 4.9E-38 T 14-10-2018 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 83 2.6E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 169 2.6E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 185 2.6E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 2.6E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 2.6E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 SUPERFAMILY SSF50891 55 203 1.01E-55 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 55 202 4.9E-47 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 268 357 1.0E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 SUPERFAMILY SSF54534 155 360 3.76E-38 T 14-10-2018 JO40_13210 e872d0cd6e711d5f12d83d2a4dafe1e5 360 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 97 114 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 JO40_03460 20addc8c342b223a5aaaed2338cefdd3 243 SUPERFAMILY SSF56317 1 243 1.44E-23 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO40_03460 20addc8c342b223a5aaaed2338cefdd3 243 Pfam PF00795 Carbon-nitrogen hydrolase 11 116 3.2E-5 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JO40_03460 20addc8c342b223a5aaaed2338cefdd3 243 Gene3D G3DSA:3.60.110.10 1 243 6.5E-25 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO40_07715 90feb12c7e1489c8b9cd4fb8346ac8a9 244 Gene3D G3DSA:3.40.1280.10 3 168 2.6E-43 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO40_07715 90feb12c7e1489c8b9cd4fb8346ac8a9 244 Pfam PF00588 SpoU rRNA Methylase family 6 159 1.7E-26 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JO40_07715 90feb12c7e1489c8b9cd4fb8346ac8a9 244 SUPERFAMILY SSF75217 4 165 5.17E-27 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO40_07715 90feb12c7e1489c8b9cd4fb8346ac8a9 244 PIRSF PIRSF004808 1 241 2.4E-45 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 JO40_02195 cfa41627b35347135838350fa036b82c 351 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 258 322 3.3E-22 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 330 31.478 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 Gene3D G3DSA:3.30.1360.10 22 235 1.6E-67 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 329 6.9E-99 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 273 329 5.0E-26 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 Gene3D G3DSA:2.170.120.12 57 187 1.6E-67 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 SMART SM00662 27 244 7.0E-46 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 SUPERFAMILY SSF47789 264 333 1.44E-19 T 14-10-2018 JO40_02195 cfa41627b35347135838350fa036b82c 351 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 238 6.9E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 Gene3D G3DSA:1.10.150.20 236 350 2.7E-25 T 14-10-2018 JO40_02195 cfa41627b35347135838350fa036b82c 351 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 77 169 6.4E-13 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 SUPERFAMILY SSF55257 14 244 1.96E-29 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_02195 cfa41627b35347135838350fa036b82c 351 SUPERFAMILY SSF56553 65 187 3.49E-24 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO40_03900 47c0e40908e0ebfcdf8d14ffab2299f7 796 SUPERFAMILY SSF55073 539 719 5.81E-53 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_03900 47c0e40908e0ebfcdf8d14ffab2299f7 796 Gene3D G3DSA:3.30.70.1230 536 725 2.7E-60 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_03900 47c0e40908e0ebfcdf8d14ffab2299f7 796 SMART SM00044 506 700 2.9E-15 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_03900 47c0e40908e0ebfcdf8d14ffab2299f7 796 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 538 714 2.1E-32 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_09710 79acf7aa9aff07b66ee13c7df24ecdba 99 Gene3D G3DSA:3.30.460.10 2 99 1.1E-17 T 14-10-2018 JO40_09710 79acf7aa9aff07b66ee13c7df24ecdba 99 SUPERFAMILY SSF81301 10 93 1.77E-14 T 14-10-2018 JO40_09710 79acf7aa9aff07b66ee13c7df24ecdba 99 Pfam PF01909 Nucleotidyltransferase domain 10 86 1.7E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 SMART SM00729 152 376 4.0E-55 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 SUPERFAMILY SSF102114 146 380 1.1E-58 T 14-10-2018 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 Pfam PF00919 Uncharacterized protein family UPF0004 3 100 5.9E-26 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 446 4.0E-141 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 Gene3D G3DSA:3.40.50.12160 1 136 7.2E-29 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 156 176 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 2 451 1.3E-171 T 14-10-2018 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 Pfam PF01938 TRAM domain 388 450 8.9E-7 T 14-10-2018 IPR002792 TRAM domain JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 Pfam PF04055 Radical SAM superfamily 156 333 2.6E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 Gene3D G3DSA:3.80.30.20 150 390 4.6E-86 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO40_11265 58f4ed45338e4a2e5fc02e66da201f06 452 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 452 63.426 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 JO40_02580 dc3e74dc685a3a67d4106b08d34594f8 708 Gene3D G3DSA:3.60.40.10 484 707 9.1E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_02580 dc3e74dc685a3a67d4106b08d34594f8 708 SMART SM00331 489 707 1.3E-47 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_02580 dc3e74dc685a3a67d4106b08d34594f8 708 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 516 706 1.1E-34 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 SUPERFAMILY SSF53448 2 387 3.29E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 SUPERFAMILY SSF51161 292 423 2.86E-21 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 Gene3D G3DSA:3.90.550.10 1 291 1.1E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 390 2.3E-136 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 Gene3D G3DSA:2.160.10.10 292 424 4.2E-39 T 14-10-2018 JO40_12800 c9d79e70b161e0edafb0f782accd0cb1 424 Pfam PF00483 Nucleotidyl transferase 6 271 1.9E-62 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JO40_01065 bc41842a625af3ada5486562326128b9 339 SUPERFAMILY SSF81345 5 334 2.35E-74 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_01065 bc41842a625af3ada5486562326128b9 339 Gene3D G3DSA:1.10.3470.10 2 339 1.8E-95 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_01065 bc41842a625af3ada5486562326128b9 339 Pfam PF01032 FecCD transport family 14 333 7.3E-94 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JO40_04400 58643bb419e636d4fb4cbecf1a25ddab 537 Gene3D G3DSA:1.10.287.950 304 537 6.7E-38 T 14-10-2018 JO40_04400 58643bb419e636d4fb4cbecf1a25ddab 537 SMART SM00283 319 537 2.8E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04400 58643bb419e636d4fb4cbecf1a25ddab 537 SUPERFAMILY SSF58104 324 534 1.96E-33 T 14-10-2018 JO40_04400 58643bb419e636d4fb4cbecf1a25ddab 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 386 526 8.1E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_06935 8d03cbdf2c68fcc20aad445d056dfad0 936 SMART SM01080 40 578 1.6E-9 T 14-10-2018 IPR007890 CHASE2 JO40_06935 8d03cbdf2c68fcc20aad445d056dfad0 936 SMART SM00044 644 847 1.0E-16 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_06935 8d03cbdf2c68fcc20aad445d056dfad0 936 Gene3D G3DSA:3.30.70.1230 664 870 4.2E-64 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_06935 8d03cbdf2c68fcc20aad445d056dfad0 936 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 673 852 1.2E-30 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_06935 8d03cbdf2c68fcc20aad445d056dfad0 936 Pfam PF05226 CHASE2 domain 35 573 6.4E-34 T 14-10-2018 IPR007890 CHASE2 JO40_06935 8d03cbdf2c68fcc20aad445d056dfad0 936 SUPERFAMILY SSF55073 669 857 3.61E-53 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 Gene3D G3DSA:3.90.740.10 198 427 1.8E-246 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 SUPERFAMILY SSF47323 682 934 5.42E-50 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 Gene3D G3DSA:1.10.730.10 668 864 2.6E-51 T 14-10-2018 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 4.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 421 436 4.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 585 594 4.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 545 558 4.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 41 52 4.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1081 14.358 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 SUPERFAMILY SSF52374 6 674 7.42E-146 T 14-10-2018 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 662 8.0E-204 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 Gene3D G3DSA:3.40.50.620 15 652 1.8E-246 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 7 885 1.2E-300 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 Pfam PF08264 Anticodon-binding domain of tRNA 725 874 3.9E-29 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JO40_03655 1ebece9abd80477a0f31954e7c70dd04 1100 SUPERFAMILY SSF50677 201 423 9.55E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO40_01375 3234486c6e1337e99377ceac98bcee41 535 Pfam PF08011 PD-(D/E)XK nuclease superfamily 437 530 6.7E-25 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_01375 3234486c6e1337e99377ceac98bcee41 535 Gene3D G3DSA:3.40.50.300 22 202 1.5E-5 T 14-10-2018 JO40_01375 3234486c6e1337e99377ceac98bcee41 535 Pfam PF09820 Predicted AAA-ATPase 8 291 6.6E-105 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 Gene3D G3DSA:1.20.1580.10 99 504 1.9E-243 T 14-10-2018 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 Gene3D G3DSA:3.40.50.300 14 606 1.9E-243 T 14-10-2018 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 SUPERFAMILY SSF52540 19 581 1.33E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 10 950 22.725 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 Gene3D G3DSA:3.30.190.20 139 248 1.9E-243 T 14-10-2018 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 12 935 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 SMART SM00382 643 918 6.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 SUPERFAMILY SSF52540 631 923 8.57E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 Gene3D G3DSA:1.20.1580.10 702 840 2.3E-140 T 14-10-2018 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 Gene3D G3DSA:3.40.50.300 627 945 2.3E-140 T 14-10-2018 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 Gene3D G3DSA:1.10.8.280 298 415 1.9E-243 T 14-10-2018 JO40_00690 2afbfdaf275b95de2b2358feb65c9334 954 ProSitePatterns PS00211 ABC transporters family signature. 840 854 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 Hamap MF_00550 Peptidase T [pepT]. 1 399 52.65 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 Gene3D G3DSA:3.30.70.360 205 314 1.1E-170 T 14-10-2018 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 Gene3D G3DSA:3.40.630.10 4 395 1.1E-170 T 14-10-2018 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 PIRSF PIRSF037215 1 401 6.5E-183 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 SUPERFAMILY SSF55031 205 315 4.76E-36 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 Pfam PF01546 Peptidase family M20/M25/M40 135 398 2.6E-11 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 Pfam PF07687 Peptidase dimerisation domain 202 303 3.6E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 SUPERFAMILY SSF53187 2 400 2.0E-74 T 14-10-2018 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 400 9.2E-163 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JO40_00880 7f31ba9fe4c3fb993d7373f48f49a738 401 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 134 173 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JO40_11730 ce765f2a47a4103abc82b79eeffbf623 207 Pfam PF10634 Fe2+ transport protein 52 204 5.9E-57 T 14-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type JO40_11730 ce765f2a47a4103abc82b79eeffbf623 207 PIRSF PIRSF017018 25 207 1.5E-61 T 14-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type JO40_11730 ce765f2a47a4103abc82b79eeffbf623 207 Gene3D G3DSA:2.60.40.2480 53 207 1.2E-60 T 14-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 PIRSF PIRSF000505 1 450 1.2E-130 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 SUPERFAMILY SSF55205 15 447 6.11E-95 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 Gene3D G3DSA:3.65.10.10 22 250 2.1E-111 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 15 440 1.3E-89 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 ProSitePatterns PS00885 EPSP synthase signature 2. 351 369 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 444 7.5E-102 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 446 28.28 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JO40_10755 8fa0bcc293d07835866757967f65e7f8 452 Gene3D G3DSA:3.65.10.10 15 437 2.1E-111 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO40_08000 c73904ab83c8625b8cfe05da25581697 270 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 247 9.3E-58 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 JO40_08000 c73904ab83c8625b8cfe05da25581697 270 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 192 263 3.2E-20 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO40_08000 c73904ab83c8625b8cfe05da25581697 270 Pfam PF00460 Flagella basal body rod protein 6 35 9.0E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO40_08000 c73904ab83c8625b8cfe05da25581697 270 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO40_08000 c73904ab83c8625b8cfe05da25581697 270 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 141 2.9E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO40_08000 c73904ab83c8625b8cfe05da25581697 270 SUPERFAMILY SSF117143 98 228 8.24E-23 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JO40_03825 aef96a3b5096914a458712d9ca7bff43 264 Pfam PF01311 Bacterial export proteins, family 1 13 247 9.3E-51 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JO40_03825 aef96a3b5096914a458712d9ca7bff43 264 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 254 9.4E-61 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 JO40_03825 aef96a3b5096914a458712d9ca7bff43 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 20 41 3.4E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JO40_03825 aef96a3b5096914a458712d9ca7bff43 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 3.4E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JO40_03825 aef96a3b5096914a458712d9ca7bff43 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 3.4E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JO40_03825 aef96a3b5096914a458712d9ca7bff43 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 3.4E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JO40_01185 f61bf6ae4a28f15a3ecc7b5e0b2f150c 247 SUPERFAMILY SSF55729 46 245 1.06E-65 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_01185 f61bf6ae4a28f15a3ecc7b5e0b2f150c 247 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 66 236 1.0E-57 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 JO40_01185 f61bf6ae4a28f15a3ecc7b5e0b2f150c 247 Gene3D G3DSA:2.30.210.20 31 90 7.8E-13 T 14-10-2018 JO40_01185 f61bf6ae4a28f15a3ecc7b5e0b2f150c 247 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 247 69.638 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 JO40_01185 f61bf6ae4a28f15a3ecc7b5e0b2f150c 247 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 68 244 7.0E-56 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 JO40_01185 f61bf6ae4a28f15a3ecc7b5e0b2f150c 247 Gene3D G3DSA:3.40.630.70 92 247 1.6E-51 T 14-10-2018 JO40_03745 9cea88d5103d602818c6e659d9024b36 574 SUPERFAMILY SSF52540 325 566 3.33E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03745 9cea88d5103d602818c6e659d9024b36 574 Pfam PF00005 ABC transporter 348 496 8.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03745 9cea88d5103d602818c6e659d9024b36 574 Gene3D G3DSA:3.40.50.300 323 570 5.1E-85 T 14-10-2018 JO40_03745 9cea88d5103d602818c6e659d9024b36 574 Gene3D G3DSA:1.20.1560.10 1 319 2.4E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03745 9cea88d5103d602818c6e659d9024b36 574 SMART SM00382 356 542 6.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03745 9cea88d5103d602818c6e659d9024b36 574 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03745 9cea88d5103d602818c6e659d9024b36 574 Pfam PF00664 ABC transporter transmembrane region 49 280 2.8E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_03745 9cea88d5103d602818c6e659d9024b36 574 SUPERFAMILY SSF90123 3 314 1.2E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_12260 0888d633bbb2f524ec9ef6fe918160eb 433 Pfam PF01098 Cell cycle protein 221 429 4.6E-56 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_12260 0888d633bbb2f524ec9ef6fe918160eb 433 Pfam PF01098 Cell cycle protein 12 198 4.8E-34 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_12260 0888d633bbb2f524ec9ef6fe918160eb 433 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 433 25.442 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_12260 0888d633bbb2f524ec9ef6fe918160eb 433 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 432 4.1E-124 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_12260 0888d633bbb2f524ec9ef6fe918160eb 433 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 390 414 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Gene3D G3DSA:3.40.50.300 128 293 9.9E-51 T 14-10-2018 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 SMART SM00760 372 441 9.3E-40 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Gene3D G3DSA:3.30.300.180 4 84 6.6E-15 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 SUPERFAMILY SSF52540 128 339 3.48E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 SMART SM00382 161 292 3.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Gene3D G3DSA:1.10.1750.10 364 466 4.4E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Pfam PF00308 Bacterial dnaA protein 129 345 3.0E-92 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 SUPERFAMILY SSF48295 359 464 7.32E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Gene3D G3DSA:1.10.8.60 294 363 1.9E-21 T 14-10-2018 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 462 2.8E-166 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 373 441 1.6E-29 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 162 182 2.1E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 259 286 2.1E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 225 239 2.1E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 193 207 2.1E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 422 441 2.1E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 ProSitePatterns PS01008 DnaA protein signature. 422 441 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Pfam PF11638 DnaA N-terminal domain 9 66 1.2E-8 T 14-10-2018 IPR024633 DnaA N-terminal domain JO40_06030 f3983d26d055986ac4bf1a74e93e6144 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 7 463 31.861 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SUPERFAMILY SSF51126 1112 1409 3.87E-13 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 1195 1219 1800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 818 847 580.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 543 563 8100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 1257 1280 3500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 1286 1312 1000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 884 907 1100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 596 620 7300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 913 937 2700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SMART SM00710 1229 1249 3700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SUPERFAMILY SSF51126 728 1002 6.7E-21 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 SUPERFAMILY SSF51126 458 692 9.81E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO40_07800 3d8cd63342540f53766fafc7d2da38d7 1469 Gene3D G3DSA:2.160.20.10 722 1064 2.5E-6 T 14-10-2018 IPR012334 Pectin lyase fold JO40_03530 33c7849603bc7cf1082dacf663b353f0 304 SUPERFAMILY SSF52833 40 152 8.2E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO40_03530 33c7849603bc7cf1082dacf663b353f0 304 Gene3D G3DSA:3.40.30.10 28 152 2.8E-7 T 14-10-2018 JO40_00290 c0677bb5560d04eb3feb011a5eab780b 385 Pfam PF00005 ABC transporter 89 241 2.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00290 c0677bb5560d04eb3feb011a5eab780b 385 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 293 360 2.2E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_00290 c0677bb5560d04eb3feb011a5eab780b 385 SUPERFAMILY SSF52540 97 379 1.2E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00290 c0677bb5560d04eb3feb011a5eab780b 385 ProSitePatterns PS00211 ABC transporters family signature. 214 228 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00290 c0677bb5560d04eb3feb011a5eab780b 385 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 292 380 1.3E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_00290 c0677bb5560d04eb3feb011a5eab780b 385 SMART SM00382 97 291 6.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00290 c0677bb5560d04eb3feb011a5eab780b 385 Gene3D G3DSA:3.40.50.300 66 384 7.9E-93 T 14-10-2018 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 167 3.6E-25 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 175 332 2.4E-7 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 SUPERFAMILY SSF53671 4 336 8.38E-58 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 377 474 2.4E-18 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 Gene3D G3DSA:3.30.70.140 377 477 4.0E-8 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 Gene3D G3DSA:3.40.50.1370 11 332 1.0E-69 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 333 4.5E-91 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 SUPERFAMILY SSF57825 485 530 1.11E-8 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 378 473 0.002 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 SUPERFAMILY SSF54893 378 477 6.28E-14 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 154 165 4.1E-6 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 286 295 4.1E-6 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 4.1E-6 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 249 258 2.5E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 2.5E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 153 170 2.5E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 2.5E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 290 295 2.5E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 2.5E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 Gene3D G3DSA:3.40.50.1370 154 321 1.0E-69 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO40_04330 a2f4f60860913eb91ea48fbb16d60142 535 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 480 529 2.5E-9 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 259 265 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 Gene3D G3DSA:3.40.50.150 130 453 1.3E-91 T 14-10-2018 JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 153 169 8.5E-23 T 14-10-2018 JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 288 312 8.5E-23 T 14-10-2018 JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 191 8.5E-23 T 14-10-2018 JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 256 268 8.5E-23 T 14-10-2018 JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 Pfam PF02384 N-6 DNA Methylase 130 400 1.8E-65 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 Pfam PF12161 HsdM N-terminal domain 15 120 9.9E-9 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 SUPERFAMILY SSF53335 14 478 1.6E-115 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_07050 4837444a2c22fb4a475aacd32deec3a1 480 Gene3D G3DSA:1.20.1260.30 4 129 1.7E-33 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JO40_13255 5e691825772d8df58abf97d622a12bc6 253 SUPERFAMILY SSF52540 17 241 7.17E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_13255 5e691825772d8df58abf97d622a12bc6 253 Gene3D G3DSA:3.40.50.300 3 252 6.6E-66 T 14-10-2018 JO40_13255 5e691825772d8df58abf97d622a12bc6 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_13255 5e691825772d8df58abf97d622a12bc6 253 Pfam PF00005 ABC transporter 34 177 2.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_13255 5e691825772d8df58abf97d622a12bc6 253 SMART SM00382 41 234 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04865 3173b251e8920450391619549206789f 1395 Gene3D G3DSA:3.30.40.60 828 931 2.1E-12 T 14-10-2018 JO40_04865 3173b251e8920450391619549206789f 1395 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 6 1388 18.084 T 14-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 JO40_04865 3173b251e8920450391619549206789f 1395 Pfam PF13395 HNH endonuclease 857 910 1.0E-22 T 14-10-2018 IPR003615 HNH nuclease JO40_04865 3173b251e8920450391619549206789f 1395 Pfam PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 1095 1388 1.3E-76 T 14-10-2018 IPR032237 CRISPR-associated endonuclease Cas9, PAM-interacting domain JO40_04865 3173b251e8920450391619549206789f 1395 Pfam PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 53 85 1.3E-12 T 14-10-2018 IPR032239 CRISPR-associated endonuclease Cas9, bridge helix JO40_04865 3173b251e8920450391619549206789f 1395 SMART SM00507 846 903 2.4E-4 T 14-10-2018 IPR003615 HNH nuclease JO40_04865 3173b251e8920450391619549206789f 1395 Pfam PF16592 REC lobe of CRISPR-associated endonuclease Cas9 175 736 1.5E-137 T 14-10-2018 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe JO40_04865 3173b251e8920450391619549206789f 1395 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 7 1071 1.8E-297 T 14-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 318 393 7.4E-29 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 PRINTS PR00956 Flagellar motor switch protein FliN signature 321 337 4.0E-26 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 PRINTS PR00956 Flagellar motor switch protein FliN signature 354 367 4.0E-26 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 PRINTS PR00956 Flagellar motor switch protein FliN signature 338 354 4.0E-26 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 PRINTS PR00956 Flagellar motor switch protein FliN signature 367 382 4.0E-26 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 322 391 1.4E-23 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 SUPERFAMILY SSF101801 319 398 2.62E-23 T 14-10-2018 IPR036429 SpoA-like superfamily JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 Gene3D G3DSA:3.40.1550.10 35 215 2.2E-16 T 14-10-2018 IPR028976 CheC-like superfamily JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 SUPERFAMILY SSF103039 34 213 1.83E-23 T 14-10-2018 IPR028976 CheC-like superfamily JO40_05890 b1fae20ce6764aab9c8b4fc11a8a4306 400 Gene3D G3DSA:2.30.330.10 311 400 4.2E-32 T 14-10-2018 IPR036429 SpoA-like superfamily JO40_00615 1678c97c0b84afc36252664a6cfd9789 78 Pfam PF00550 Phosphopantetheine attachment site 7 73 2.0E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JO40_00615 1678c97c0b84afc36252664a6cfd9789 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 76 5.0E-18 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JO40_00615 1678c97c0b84afc36252664a6cfd9789 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-29 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JO40_00615 1678c97c0b84afc36252664a6cfd9789 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 19.651 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JO40_00615 1678c97c0b84afc36252664a6cfd9789 78 SUPERFAMILY SSF47336 1 76 1.57E-21 T 14-10-2018 IPR036736 ACP-like superfamily JO40_00615 1678c97c0b84afc36252664a6cfd9789 78 Gene3D G3DSA:1.10.1200.10 1 78 2.9E-25 T 14-10-2018 IPR036736 ACP-like superfamily JO40_10565 23a927385ff8749b70db78b8312402e3 607 Gene3D G3DSA:2.60.120.260 27 196 2.5E-36 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JO40_10565 23a927385ff8749b70db78b8312402e3 607 SUPERFAMILY SSF51445 288 579 2.03E-53 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_10565 23a927385ff8749b70db78b8312402e3 607 Gene3D G3DSA:2.60.40.10 197 291 7.0E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_10565 23a927385ff8749b70db78b8312402e3 607 Gene3D G3DSA:3.20.20.80 300 585 2.1E-49 T 14-10-2018 JO40_10565 23a927385ff8749b70db78b8312402e3 607 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 40 190 5.9E-14 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JO40_10565 23a927385ff8749b70db78b8312402e3 607 Pfam PF00703 Glycosyl hydrolases family 2 199 291 2.1E-5 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO40_10565 23a927385ff8749b70db78b8312402e3 607 SUPERFAMILY SSF49785 23 196 1.98E-43 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JO40_10565 23a927385ff8749b70db78b8312402e3 607 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 304 474 1.4E-5 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO40_10565 23a927385ff8749b70db78b8312402e3 607 SUPERFAMILY SSF49303 202 292 3.74E-9 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JO40_07735 7da0171ced842f520e22d674307b8282 505 SUPERFAMILY SSF55781 8 188 1.48E-40 T 14-10-2018 JO40_07735 7da0171ced842f520e22d674307b8282 505 SUPERFAMILY SSF46689 408 502 3.27E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_07735 7da0171ced842f520e22d674307b8282 505 Pfam PF00158 Sigma-54 interaction domain 196 361 2.7E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO40_07735 7da0171ced842f520e22d674307b8282 505 Pfam PF13185 GAF domain 28 166 1.7E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO40_07735 7da0171ced842f520e22d674307b8282 505 Gene3D G3DSA:3.40.50.300 183 366 7.0E-65 T 14-10-2018 JO40_07735 7da0171ced842f520e22d674307b8282 505 Pfam PF02954 Bacterial regulatory protein, Fis family 466 499 9.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO40_07735 7da0171ced842f520e22d674307b8282 505 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 408 417 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JO40_07735 7da0171ced842f520e22d674307b8282 505 SMART SM00065 28 176 2.4E-21 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO40_07735 7da0171ced842f520e22d674307b8282 505 SUPERFAMILY SSF52540 196 437 5.11E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07735 7da0171ced842f520e22d674307b8282 505 Gene3D G3DSA:1.10.8.60 368 439 8.7E-25 T 14-10-2018 JO40_07735 7da0171ced842f520e22d674307b8282 505 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 219 232 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO40_07735 7da0171ced842f520e22d674307b8282 505 SMART SM00382 215 359 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07735 7da0171ced842f520e22d674307b8282 505 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 483 503 3.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO40_07735 7da0171ced842f520e22d674307b8282 505 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 483 3.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO40_07735 7da0171ced842f520e22d674307b8282 505 Gene3D G3DSA:3.30.450.40 2 179 5.8E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily JO40_07735 7da0171ced842f520e22d674307b8282 505 Gene3D G3DSA:1.10.10.60 448 504 1.5E-13 T 14-10-2018 JO40_05115 7939aedadf92d937e7d4cf8535e81ae7 209 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO40_05115 7939aedadf92d937e7d4cf8535e81ae7 209 Gene3D G3DSA:3.20.20.70 2 208 6.5E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_05115 7939aedadf92d937e7d4cf8535e81ae7 209 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.4E-77 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO40_05115 7939aedadf92d937e7d4cf8535e81ae7 209 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 205 3.0E-80 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO40_05115 7939aedadf92d937e7d4cf8535e81ae7 209 PIRSF PIRSF001461 1 207 1.9E-88 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO40_05115 7939aedadf92d937e7d4cf8535e81ae7 209 SUPERFAMILY SSF51366 5 205 7.4E-68 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JO40_04505 ad55390d49da5e20c04184343a0c8e44 123 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 121 10.19 T 14-10-2018 IPR022907 VapC family GO:0004540 JO40_04505 ad55390d49da5e20c04184343a0c8e44 123 Pfam PF01850 PIN domain 3 109 1.8E-12 T 14-10-2018 IPR002716 PIN domain JO40_04505 ad55390d49da5e20c04184343a0c8e44 123 SUPERFAMILY SSF88723 1 122 2.66E-26 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_04505 ad55390d49da5e20c04184343a0c8e44 123 Gene3D G3DSA:3.40.50.1010 1 123 5.2E-23 T 14-10-2018 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 SUPERFAMILY SSF58104 359 489 1.33E-9 T 14-10-2018 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 Gene3D G3DSA:1.10.287.950 423 723 2.9E-49 T 14-10-2018 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 Pfam PF02743 Cache domain 76 300 2.6E-36 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 455 484 5.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 609 638 5.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 5.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 532 559 5.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 SMART SM00283 434 723 1.5E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 SUPERFAMILY SSF103190 135 224 1.49E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_04270 2642d57d3df36c69593ec064b59319fe 724 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 512 677 1.2E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 SUPERFAMILY SSF58104 461 723 1.48E-41 T 14-10-2018 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 Gene3D G3DSA:3.30.450.20 116 214 1.3E-34 T 14-10-2018 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 Gene3D G3DSA:1.20.1480.50 309 396 2.0E-6 T 14-10-2018 JO40_04270 2642d57d3df36c69593ec064b59319fe 724 Gene3D G3DSA:3.30.450.20 215 308 1.3E-34 T 14-10-2018 JO40_04860 60551363a14822a83332602fed80209f 624 SMART SM00490 254 335 8.1E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_04860 60551363a14822a83332602fed80209f 624 SUPERFAMILY SSF52540 70 357 3.27E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04860 60551363a14822a83332602fed80209f 624 Pfam PF00271 Helicase conserved C-terminal domain 232 334 1.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_04860 60551363a14822a83332602fed80209f 624 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 19 620 1.2E-207 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 JO40_04860 60551363a14822a83332602fed80209f 624 SMART SM00956 423 525 6.2E-37 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 JO40_04860 60551363a14822a83332602fed80209f 624 SUPERFAMILY SSF46785 418 538 4.22E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_04860 60551363a14822a83332602fed80209f 624 Gene3D G3DSA:1.10.150.80 546 624 3.9E-16 T 14-10-2018 JO40_04860 60551363a14822a83332602fed80209f 624 Gene3D G3DSA:3.40.50.300 2 213 3.4E-76 T 14-10-2018 JO40_04860 60551363a14822a83332602fed80209f 624 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 474 1.4E-159 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 JO40_04860 60551363a14822a83332602fed80209f 624 Pfam PF00270 DEAD/DEAH box helicase 32 192 1.2E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO40_04860 60551363a14822a83332602fed80209f 624 Gene3D G3DSA:3.40.50.300 214 416 1.5E-60 T 14-10-2018 JO40_04860 60551363a14822a83332602fed80209f 624 SMART SM00487 26 222 7.9E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_04860 60551363a14822a83332602fed80209f 624 SUPERFAMILY SSF47819 546 621 1.35E-17 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 JO40_04860 60551363a14822a83332602fed80209f 624 Pfam PF09382 RQC domain 419 527 2.3E-29 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 JO40_04860 60551363a14822a83332602fed80209f 624 Pfam PF00570 HRDC domain 553 619 1.8E-15 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JO40_04860 60551363a14822a83332602fed80209f 624 Gene3D G3DSA:1.10.10.10 417 534 4.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_04860 60551363a14822a83332602fed80209f 624 Pfam PF16124 RecQ zinc-binding 347 414 9.3E-11 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JO40_04860 60551363a14822a83332602fed80209f 624 SMART SM00341 549 623 0.0058 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JO40_06160 438fa2a207d70575d5a1dbb3f7fdb949 159 Gene3D G3DSA:3.10.20.30 1 74 1.1E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO40_06160 438fa2a207d70575d5a1dbb3f7fdb949 159 SUPERFAMILY SSF54292 1 77 3.41E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JO40_06160 438fa2a207d70575d5a1dbb3f7fdb949 159 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JO40_06160 438fa2a207d70575d5a1dbb3f7fdb949 159 SUPERFAMILY SSF47741 79 156 1.14E-14 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily JO40_06160 438fa2a207d70575d5a1dbb3f7fdb949 159 Gene3D G3DSA:1.10.150.120 75 159 2.4E-10 T 14-10-2018 JO40_06160 438fa2a207d70575d5a1dbb3f7fdb949 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 55 5.6E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JO40_06160 438fa2a207d70575d5a1dbb3f7fdb949 159 Pfam PF01799 [2Fe-2S] binding domain 73 149 9.4E-12 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 15 266 2.3E-38 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 303 462 5.9E-34 T 14-10-2018 IPR027623 AmmeMemoRadiSam system protein A JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 Pfam PF01871 AMMECR1 305 463 2.5E-36 T 14-10-2018 IPR002733 AMMECR1 domain JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 SUPERFAMILY SSF53213 13 274 3.53E-38 T 14-10-2018 JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 SUPERFAMILY SSF143447 294 465 1.44E-46 T 14-10-2018 IPR036071 AMMECR1 domain superfamily JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 Gene3D G3DSA:3.30.700.20 292 423 6.3E-33 T 14-10-2018 IPR027485 AMMECR1, N-terminal JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 42 254 2.7E-7 T 14-10-2018 JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 303 466 1.1E-29 T 14-10-2018 IPR023473 AMMECR1 JO40_08315 7b9fe138a09bd7eacf589ef748b3e89b 466 Gene3D G3DSA:3.40.830.10 12 271 7.5E-65 T 14-10-2018 JO40_02465 7b4f5250f89594d14081fd91c52b689e 246 SMART SM00382 28 221 1.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02465 7b4f5250f89594d14081fd91c52b689e 246 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 241 3.3E-101 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 JO40_02465 7b4f5250f89594d14081fd91c52b689e 246 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_02465 7b4f5250f89594d14081fd91c52b689e 246 Pfam PF00005 ABC transporter 19 170 5.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_02465 7b4f5250f89594d14081fd91c52b689e 246 SUPERFAMILY SSF52540 3 229 1.19E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02465 7b4f5250f89594d14081fd91c52b689e 246 Gene3D G3DSA:3.40.50.300 1 244 5.0E-54 T 14-10-2018 JO40_09145 5c21951c7f491f18e8264062ebf1a28d 175 SUPERFAMILY SSF141571 23 170 8.37E-25 T 14-10-2018 JO40_09145 5c21951c7f491f18e8264062ebf1a28d 175 Gene3D G3DSA:2.160.20.100 4 172 5.1E-23 T 14-10-2018 JO40_09145 5c21951c7f491f18e8264062ebf1a28d 175 Pfam PF13599 Pentapeptide repeats (9 copies) 42 110 1.9E-8 T 14-10-2018 IPR001646 Pentapeptide repeat JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Gene3D G3DSA:1.25.40.10 2 161 4.8E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Gene3D G3DSA:1.25.40.10 377 510 6.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Gene3D G3DSA:1.25.40.10 270 376 1.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Gene3D G3DSA:1.25.40.10 513 627 3.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SMART SM00028 581 614 0.081 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SMART SM00028 93 126 8.0E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SMART SM00028 412 445 0.043 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SMART SM00028 202 235 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SMART SM00028 127 160 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SMART SM00028 308 341 0.044 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SMART SM00028 51 84 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Pfam PF13181 Tetratricopeptide repeat 129 160 0.0015 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Pfam PF13181 Tetratricopeptide repeat 415 445 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Pfam PF07719 Tetratricopeptide repeat 96 125 1.5E-6 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SUPERFAMILY SSF48452 97 492 1.9E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 SUPERFAMILY SSF48452 395 617 2.1E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03295 70e2e30432e9a0784376cae3d145c8f2 627 Gene3D G3DSA:1.25.40.10 162 269 1.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07240 d4d424901cdaac8c2ff09be59d2cc475 198 Gene3D G3DSA:1.10.357.10 6 191 2.7E-21 T 14-10-2018 JO40_07240 d4d424901cdaac8c2ff09be59d2cc475 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 9.9E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_07240 d4d424901cdaac8c2ff09be59d2cc475 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_07240 d4d424901cdaac8c2ff09be59d2cc475 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_07240 d4d424901cdaac8c2ff09be59d2cc475 198 SUPERFAMILY SSF46689 7 73 2.82E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SUPERFAMILY SSF48403 740 932 2.35E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Gene3D G3DSA:1.25.40.20 533 670 7.2E-30 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Gene3D G3DSA:1.25.40.20 33 152 2.5E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Gene3D G3DSA:1.25.40.20 433 532 5.8E-22 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Gene3D G3DSA:1.25.40.20 153 324 1.4E-25 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Gene3D G3DSA:1.25.40.20 671 863 7.6E-40 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Gene3D G3DSA:1.25.40.20 864 934 2.7E-8 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF13637 Ankyrin repeats (many copies) 880 931 7.6E-6 T 14-10-2018 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF13637 Ankyrin repeats (many copies) 546 598 1.3E-7 T 14-10-2018 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 248 277 0.5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 652 681 0.1 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 161 191 430.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 281 310 0.31 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 577 606 0.03 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 544 573 0.0021 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 750 778 1200.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 348 378 3.0E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 66 95 3.0E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 877 907 430.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 780 810 0.07 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 685 714 0.59 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 480 509 0.12 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 614 643 68.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 814 843 0.2 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 314 344 130.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 446 476 0.045 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 718 746 320.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 382 411 0.0026 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SMART SM00248 99 128 0.61 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 PRINTS PR01415 Ankyrin repeat signature 481 496 3.9E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 PRINTS PR01415 Ankyrin repeat signature 560 574 3.9E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF12796 Ankyrin repeats (3 copies) 427 507 4.2E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF12796 Ankyrin repeats (3 copies) 248 312 4.1E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF12796 Ankyrin repeats (3 copies) 55 130 2.1E-12 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF12796 Ankyrin repeats (3 copies) 650 716 1.0E-8 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF12796 Ankyrin repeats (3 copies) 759 841 1.8E-6 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Pfam PF12796 Ankyrin repeats (3 copies) 326 413 7.2E-14 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SUPERFAMILY SSF48403 52 321 3.91E-40 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 Gene3D G3DSA:1.25.40.20 325 432 5.3E-27 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_01770 75f1c947cc9107cb4be80394f12a1b5b 934 SUPERFAMILY SSF48403 334 726 2.89E-68 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_02680 b01c3eceaf270e59e63a3a86f5595255 249 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 205 4.3E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JO40_02680 b01c3eceaf270e59e63a3a86f5595255 249 Gene3D G3DSA:3.30.950.10 108 227 2.8E-48 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JO40_02680 b01c3eceaf270e59e63a3a86f5595255 249 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 2 245 1.4E-101 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 JO40_02680 b01c3eceaf270e59e63a3a86f5595255 249 SUPERFAMILY SSF53790 1 245 7.59E-64 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JO40_02680 b01c3eceaf270e59e63a3a86f5595255 249 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 73 106 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JO40_02680 b01c3eceaf270e59e63a3a86f5595255 249 Gene3D G3DSA:3.40.1010.10 1 107 5.3E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JO40_02680 b01c3eceaf270e59e63a3a86f5595255 249 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 5 19 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 Pfam PF00448 SRP54-type protein, GTPase domain 102 295 5.3E-75 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 SUPERFAMILY SSF47446 297 426 1.96E-42 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 Gene3D G3DSA:1.20.120.140 5 305 9.9E-122 T 14-10-2018 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 437 32.815 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 Pfam PF02881 SRP54-type protein, helical bundle domain 6 82 9.3E-19 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 Pfam PF02978 Signal peptide binding domain 327 423 2.6E-29 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 SUPERFAMILY SSF52540 101 297 6.28E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07690 0096cefdf26e801abe4870bc707961e5 443 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 425 9.9E-176 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 SMART SM00962 101 295 3.1E-110 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 Gene3D G3DSA:3.40.50.300 90 284 9.9E-122 T 14-10-2018 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 SMART SM00963 1 86 1.8E-29 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 SUPERFAMILY SSF47364 1 93 2.09E-24 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 JO40_07690 0096cefdf26e801abe4870bc707961e5 443 SMART SM00382 100 246 9.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07690 0096cefdf26e801abe4870bc707961e5 443 Gene3D G3DSA:1.10.260.30 310 439 2.4E-36 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 Gene3D G3DSA:3.30.390.30 326 444 4.3E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.5E-22 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.5E-22 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.5E-22 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.5E-22 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 1.5E-22 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 430 5.1E-10 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 Gene3D G3DSA:3.50.50.60 118 242 1.6E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 SUPERFAMILY SSF51905 2 315 9.21E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 SUPERFAMILY SSF55424 322 443 9.79E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 2.1E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.8E-16 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.8E-16 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 1.8E-16 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 1.8E-16 T 14-10-2018 JO40_04965 4cf2e6e12bf36e44b4d77689a9cc08a5 444 Gene3D G3DSA:3.50.50.60 4 315 1.6E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_05640 cc220aa735c7b20c27cbd3e6c50fdbfd 175 ProSitePatterns PS00201 Flavodoxin signature. 24 40 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JO40_05640 cc220aa735c7b20c27cbd3e6c50fdbfd 175 Gene3D G3DSA:3.40.50.360 16 174 1.8E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_05640 cc220aa735c7b20c27cbd3e6c50fdbfd 175 Pfam PF12682 Flavodoxin 21 158 3.1E-41 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JO40_05640 cc220aa735c7b20c27cbd3e6c50fdbfd 175 SUPERFAMILY SSF52218 21 139 2.36E-21 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_12285 ebd4e730c4be9e6b4ebc2f66c5a3ad70 311 SUPERFAMILY SSF48452 129 301 1.55E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12285 ebd4e730c4be9e6b4ebc2f66c5a3ad70 311 Gene3D G3DSA:1.25.40.10 201 308 1.7E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12285 ebd4e730c4be9e6b4ebc2f66c5a3ad70 311 Gene3D G3DSA:1.25.40.10 108 200 3.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12285 ebd4e730c4be9e6b4ebc2f66c5a3ad70 311 Pfam PF13414 TPR repeat 242 283 3.9E-7 T 14-10-2018 JO40_12285 ebd4e730c4be9e6b4ebc2f66c5a3ad70 311 SMART SM00028 269 302 0.0012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12285 ebd4e730c4be9e6b4ebc2f66c5a3ad70 311 SMART SM00028 165 198 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12285 ebd4e730c4be9e6b4ebc2f66c5a3ad70 311 SMART SM00028 235 268 46.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 SUPERFAMILY SSF90123 9 321 3.79E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 Gene3D G3DSA:3.40.50.300 330 581 1.2E-84 T 14-10-2018 JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 SUPERFAMILY SSF52540 328 568 7.03E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 Gene3D G3DSA:1.20.1560.10 4 318 6.8E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 SMART SM00382 360 546 3.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 Pfam PF00005 ABC transporter 351 500 9.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_01855 fdd951a8c2f765d0d0ab97dfa6a49ff3 583 Pfam PF00664 ABC transporter transmembrane region 25 290 1.3E-11 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_04935 0d1e21f65f04f390cf0cb0fcd650a27a 514 Pfam PF00005 ABC transporter 350 473 1.8E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04935 0d1e21f65f04f390cf0cb0fcd650a27a 514 Gene3D G3DSA:3.40.50.300 308 511 5.4E-34 T 14-10-2018 JO40_04935 0d1e21f65f04f390cf0cb0fcd650a27a 514 Gene3D G3DSA:1.20.1560.10 1 298 2.5E-21 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04935 0d1e21f65f04f390cf0cb0fcd650a27a 514 SUPERFAMILY SSF90123 2 297 7.72E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04935 0d1e21f65f04f390cf0cb0fcd650a27a 514 SUPERFAMILY SSF52540 320 502 3.06E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04935 0d1e21f65f04f390cf0cb0fcd650a27a 514 Pfam PF00664 ABC transporter transmembrane region 16 278 1.7E-6 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 PIRSF PIRSF005677 1 561 2.8E-245 T 14-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 Gene3D G3DSA:1.10.10.480 317 391 3.4E-234 T 14-10-2018 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 Pfam PF00365 Phosphofructokinase 74 333 8.4E-40 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 SUPERFAMILY SSF53784 5 548 1.02E-166 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 Hamap MF_01980 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 552 44.594 T 14-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 Gene3D G3DSA:3.40.50.450 10 500 3.4E-234 T 14-10-2018 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 Gene3D G3DSA:3.40.50.460 219 534 3.4E-234 T 14-10-2018 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 198 215 4.9E-13 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 165 181 4.9E-13 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 301 313 4.9E-13 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 255 4.9E-13 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 76 95 4.9E-13 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO40_11255 36fb45262d8d860b5cc3fb77261c804a 563 TIGRFAM TIGR02477 PFKA_PPi: diphosphate--fructose-6-phosphate 1-phosphotransferase 6 550 2.3E-269 T 14-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 56 74 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 Pfam PF01022 Bacterial regulatory protein, arsR family 40 86 3.9E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 SUPERFAMILY SSF46785 17 113 9.99E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 Gene3D G3DSA:1.10.10.10 3 117 3.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 65 2.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 50 2.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 82 97 2.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 2.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO40_09555 95bb1ef6245efb2216f5e19b24665725 117 SMART SM00418 33 111 3.4E-28 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO40_07870 66ee6140f06b1084c964a78e854a4ee0 418 Pfam PF03572 Peptidase family S41 181 394 4.7E-25 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JO40_07870 66ee6140f06b1084c964a78e854a4ee0 418 SUPERFAMILY SSF52096 105 413 8.62E-39 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_12930 98103d401391e356904a443839e52413 531 Gene3D G3DSA:3.10.105.10 297 499 4.6E-102 T 14-10-2018 JO40_12930 98103d401391e356904a443839e52413 531 Gene3D G3DSA:3.40.190.10 50 513 4.6E-102 T 14-10-2018 JO40_12930 98103d401391e356904a443839e52413 531 SUPERFAMILY SSF53850 35 528 1.19E-102 T 14-10-2018 JO40_12930 98103d401391e356904a443839e52413 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 447 1.3E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_12930 98103d401391e356904a443839e52413 531 Gene3D G3DSA:3.90.76.10 69 203 4.6E-102 T 14-10-2018 JO40_12930 98103d401391e356904a443839e52413 531 PIRSF PIRSF002741 2 531 3.1E-80 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 SUPERFAMILY SSF58104 423 656 1.23E-46 T 14-10-2018 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 Gene3D G3DSA:1.10.287.950 437 655 1.5E-43 T 14-10-2018 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 SUPERFAMILY SSF58104 336 438 6.28E-9 T 14-10-2018 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 347 678 6.0E-5 T 14-10-2018 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 626 1.6E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 SUPERFAMILY SSF103190 65 190 2.88E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_04265 f313699619523aba0d4ba539c1ef9083 701 SMART SM00304 314 368 3.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 Pfam PF00672 HAMP domain 314 363 6.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 Gene3D G3DSA:1.10.287.950 314 428 1.7E-11 T 14-10-2018 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 SMART SM00283 411 658 2.7E-71 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 Gene3D G3DSA:3.30.450.20 147 295 1.4E-22 T 14-10-2018 JO40_04265 f313699619523aba0d4ba539c1ef9083 701 Pfam PF02743 Cache domain 41 276 1.2E-28 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_05375 2745b45ed19033990dc5a0fa8c0d20d3 215 Pfam PF00578 AhpC/TSA family 12 139 1.2E-26 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO40_05375 2745b45ed19033990dc5a0fa8c0d20d3 215 Hamap MF_00401 Peroxiredoxin. 9 215 47.643 T 14-10-2018 IPR022915 Peroxiredoxin, TDXH subfamily GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JO40_05375 2745b45ed19033990dc5a0fa8c0d20d3 215 SUPERFAMILY SSF52833 6 211 2.08E-62 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO40_05375 2745b45ed19033990dc5a0fa8c0d20d3 215 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 202 1.0E-13 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO40_05375 2745b45ed19033990dc5a0fa8c0d20d3 215 Gene3D G3DSA:3.30.1020.10 150 215 3.3E-28 T 14-10-2018 JO40_05375 2745b45ed19033990dc5a0fa8c0d20d3 215 Gene3D G3DSA:3.40.30.10 10 149 3.0E-41 T 14-10-2018 JO40_05375 2745b45ed19033990dc5a0fa8c0d20d3 215 PIRSF PIRSF000239 4 214 2.1E-73 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO40_09890 4bf1a5f84f81dc58beb0a58db4884c25 368 PIRSF PIRSF000390 4 368 3.6E-103 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO40_09890 4bf1a5f84f81dc58beb0a58db4884c25 368 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 363 3.6E-118 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO40_09890 4bf1a5f84f81dc58beb0a58db4884c25 368 Gene3D G3DSA:3.90.1150.10 250 368 3.2E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_09890 4bf1a5f84f81dc58beb0a58db4884c25 368 SUPERFAMILY SSF53383 14 366 2.5E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_09890 4bf1a5f84f81dc58beb0a58db4884c25 368 Gene3D G3DSA:3.40.640.10 1 247 1.4E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 SUPERFAMILY SSF54631 201 344 1.77E-27 T 14-10-2018 JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 SUPERFAMILY SSF56176 367 436 3.54E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 Pfam PF00571 CBS domain 284 330 0.0011 T 14-10-2018 IPR000644 CBS domain JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 Gene3D G3DSA:3.10.580.10 187 345 6.8E-46 T 14-10-2018 JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 Gene3D G3DSA:3.30.465.10 346 434 1.0E-19 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 Pfam PF03471 Transporter associated domain 367 433 2.2E-17 T 14-10-2018 IPR005170 Transporter-associated domain JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 Pfam PF01595 Domain of unknown function DUF21 13 191 7.8E-47 T 14-10-2018 IPR002550 CNNM, transmembrane domain JO40_04845 d800a32cf31d7b41ca5116277081b70b 439 SMART SM01091 358 436 4.7E-18 T 14-10-2018 IPR005170 Transporter-associated domain JO40_00915 2e4412a450359ce39375f5b2a3911401 284 SMART SM00283 31 278 5.1E-6 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00915 2e4412a450359ce39375f5b2a3911401 284 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 104 256 8.5E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00915 2e4412a450359ce39375f5b2a3911401 284 SUPERFAMILY SSF58104 9 282 3.27E-41 T 14-10-2018 JO40_00915 2e4412a450359ce39375f5b2a3911401 284 Gene3D G3DSA:1.10.287.950 3 283 1.5E-34 T 14-10-2018 JO40_07450 7c8a58c4467ea1476f7fbfee3863bda1 448 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 448 155.774 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JO40_07450 7c8a58c4467ea1476f7fbfee3863bda1 448 Gene3D G3DSA:3.90.1150.110 11 434 5.0E-138 T 14-10-2018 JO40_07450 7c8a58c4467ea1476f7fbfee3863bda1 448 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 445 2.5E-158 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JO40_07450 7c8a58c4467ea1476f7fbfee3863bda1 448 Pfam PF03841 L-seryl-tRNA selenium transferase 82 428 6.3E-109 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JO40_07450 7c8a58c4467ea1476f7fbfee3863bda1 448 SUPERFAMILY SSF53383 78 447 5.96E-43 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_07450 7c8a58c4467ea1476f7fbfee3863bda1 448 Gene3D G3DSA:3.40.640.10 94 349 5.0E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_00105 2e167dd678fb36087ec1d1ab09cd91ae 623 PRINTS PR01005 Flagellar hook-associated protein signature 133 153 4.6E-6 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO40_00105 2e167dd678fb36087ec1d1ab09cd91ae 623 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 4.6E-6 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO40_00105 2e167dd678fb36087ec1d1ab09cd91ae 623 PRINTS PR01005 Flagellar hook-associated protein signature 166 190 4.6E-6 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO40_00105 2e167dd678fb36087ec1d1ab09cd91ae 623 SUPERFAMILY SSF64518 144 620 1.03E-19 T 14-10-2018 JO40_00105 2e167dd678fb36087ec1d1ab09cd91ae 623 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 568 619 1.3E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO40_00105 2e167dd678fb36087ec1d1ab09cd91ae 623 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 344 3.8E-78 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 SUPERFAMILY SSF50447 539 620 5.08E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Pfam PF00009 Elongation factor Tu GTP binding domain 370 526 1.3E-31 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 SUPERFAMILY SSF50447 768 864 1.13E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Gene3D G3DSA:2.40.30.10 537 654 4.1E-38 T 14-10-2018 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 290 340 1.0E-16 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 SUPERFAMILY SSF52156 643 773 4.05E-35 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Pfam PF11987 Translation-initiation factor 2 651 756 1.4E-35 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Gene3D G3DSA:3.40.50.10050 660 767 1.1E-36 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 368 524 9.0E-30 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 283 865 7.6E-257 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 ProSitePatterns PS01176 Initiation factor 2 signature. 817 839 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Gene3D G3DSA:2.40.30.10 768 865 3.1E-31 T 14-10-2018 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Gene3D G3DSA:3.40.50.300 362 536 7.3E-70 T 14-10-2018 JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 SUPERFAMILY SSF52540 349 536 1.88E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08635 151e741028412a3c868cb02ef7f5e79a 886 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 14 864 16.945 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JO40_05360 c3c88dfaa739bf7e5c2e1e5c349a1aca 188 Gene3D G3DSA:3.90.79.10 1 182 3.8E-38 T 14-10-2018 JO40_05360 c3c88dfaa739bf7e5c2e1e5c349a1aca 188 SUPERFAMILY SSF55811 9 182 9.88E-35 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JO40_05360 c3c88dfaa739bf7e5c2e1e5c349a1aca 188 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JO40_05360 c3c88dfaa739bf7e5c2e1e5c349a1aca 188 Pfam PF00293 NUDIX domain 52 162 1.2E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JO40_05360 c3c88dfaa739bf7e5c2e1e5c349a1aca 188 PRINTS PR00502 NUDIX hydrolase family signature 93 108 2.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO40_05360 c3c88dfaa739bf7e5c2e1e5c349a1aca 188 PRINTS PR00502 NUDIX hydrolase family signature 79 93 2.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO40_07980 385edd422e0498ef641a9d611d4d4580 292 SUPERFAMILY SSF51735 7 166 9.99E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_07980 385edd422e0498ef641a9d611d4d4580 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 JO40_07980 385edd422e0498ef641a9d611d4d4580 292 Gene3D G3DSA:1.10.1040.10 167 292 5.3E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JO40_07980 385edd422e0498ef641a9d611d4d4580 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 163 1.7E-47 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JO40_07980 385edd422e0498ef641a9d611d4d4580 292 PIRSF PIRSF000103 1 292 1.0E-65 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JO40_07980 385edd422e0498ef641a9d611d4d4580 292 SUPERFAMILY SSF48179 168 290 1.36E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JO40_07980 385edd422e0498ef641a9d611d4d4580 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 289 2.2E-33 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JO40_07980 385edd422e0498ef641a9d611d4d4580 292 Gene3D G3DSA:3.40.50.720 2 166 9.6E-48 T 14-10-2018 JO40_01445 e22aa31fa885463e6b0173f2130d5aae 328 Gene3D G3DSA:1.10.8.10 14 95 4.3E-14 T 14-10-2018 JO40_01445 e22aa31fa885463e6b0173f2130d5aae 328 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 36 321 1.4E-82 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JO40_01445 e22aa31fa885463e6b0173f2130d5aae 328 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 35 323 4.6E-52 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 JO40_01445 e22aa31fa885463e6b0173f2130d5aae 328 SUPERFAMILY SSF53335 27 311 5.84E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_01445 e22aa31fa885463e6b0173f2130d5aae 328 Gene3D G3DSA:3.40.50.150 96 326 3.6E-48 T 14-10-2018 JO40_08090 3393a5451d60ab3173037be93f1264ec 573 Gene3D G3DSA:1.20.1560.10 1 322 3.5E-32 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08090 3393a5451d60ab3173037be93f1264ec 573 Pfam PF00005 ABC transporter 347 493 5.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08090 3393a5451d60ab3173037be93f1264ec 573 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08090 3393a5451d60ab3173037be93f1264ec 573 SUPERFAMILY SSF90123 7 316 3.27E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08090 3393a5451d60ab3173037be93f1264ec 573 Pfam PF00664 ABC transporter transmembrane region 26 268 5.6E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_08090 3393a5451d60ab3173037be93f1264ec 573 SUPERFAMILY SSF52540 325 563 8.77E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08090 3393a5451d60ab3173037be93f1264ec 573 SMART SM00382 355 541 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08090 3393a5451d60ab3173037be93f1264ec 573 Gene3D G3DSA:3.40.50.300 323 572 6.5E-87 T 14-10-2018 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 Pfam PF01584 CheW-like domain 34 170 1.8E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 SMART SM00260 29 168 8.9E-47 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 PRINTS PR00996 Glutamate methyltransferase family signature 289 309 9.2E-10 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 PRINTS PR00996 Glutamate methyltransferase family signature 384 398 9.2E-10 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 PRINTS PR00996 Glutamate methyltransferase family signature 403 426 9.2E-10 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 SUPERFAMILY SSF50341 33 171 2.75E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 Pfam PF01739 CheR methyltransferase, SAM binding domain 264 438 1.8E-45 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JO40_11855 2ac9695d59e951079905cf2efd727d47 446 Gene3D G3DSA:2.30.30.40 35 162 1.3E-35 T 14-10-2018 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 Gene3D G3DSA:2.40.50.180 50 168 1.3E-35 T 14-10-2018 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 Gene3D G3DSA:3.40.50.150 265 445 8.8E-26 T 14-10-2018 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 SMART SM00138 197 444 8.9E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_11855 2ac9695d59e951079905cf2efd727d47 446 SUPERFAMILY SSF53335 263 434 7.55E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 SMART SM00450 454 548 1.5E-20 T 14-10-2018 IPR001763 Rhodanese-like domain JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 SUPERFAMILY SSF55424 323 446 6.36E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 SUPERFAMILY SSF51905 3 122 1.13E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 429 5.9E-11 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 Gene3D G3DSA:3.50.50.60 4 340 1.4E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 Pfam PF00581 Rhodanese-like domain 461 540 1.4E-14 T 14-10-2018 IPR001763 Rhodanese-like domain JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 307 9.6E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 8.6E-19 T 14-10-2018 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 8.6E-19 T 14-10-2018 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 8.6E-19 T 14-10-2018 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 8.6E-19 T 14-10-2018 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-10 T 14-10-2018 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 1.1E-10 T 14-10-2018 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 1.1E-10 T 14-10-2018 JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 SUPERFAMILY SSF52821 432 542 1.57E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 SUPERFAMILY SSF51905 122 317 2.93E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 Gene3D G3DSA:3.40.250.10 450 545 6.1E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO40_04035 c8094f508b0c333f5a750fdc4ced2b88 565 Gene3D G3DSA:3.50.50.60 116 440 1.4E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_05235 ddfdbe0b9ec0ed78601f271acb5ef9b1 550 Gene3D G3DSA:3.30.300.310 448 550 1.3E-30 T 14-10-2018 JO40_05235 ddfdbe0b9ec0ed78601f271acb5ef9b1 550 Gene3D G3DSA:3.40.50.12780 2 445 3.2E-143 T 14-10-2018 JO40_05235 ddfdbe0b9ec0ed78601f271acb5ef9b1 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 461 539 2.3E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JO40_05235 ddfdbe0b9ec0ed78601f271acb5ef9b1 550 Pfam PF00501 AMP-binding enzyme 39 452 2.9E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO40_05235 ddfdbe0b9ec0ed78601f271acb5ef9b1 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 202 213 - T 14-10-2018 IPR020845 AMP-binding, conserved site JO40_05235 ddfdbe0b9ec0ed78601f271acb5ef9b1 550 SUPERFAMILY SSF56801 11 548 3.01E-138 T 14-10-2018 JO40_09865 19d73ccf3515e99f278e05ed47ca3efd 332 SUPERFAMILY SSF55729 157 318 9.47E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_01645 3c0f58c3f2be64718b448af838346fe9 374 Pfam PF01609 Transposase DDE domain 107 340 1.4E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 JO40_01645 3c0f58c3f2be64718b448af838346fe9 374 Pfam PF13808 DDE_Tnp_1-associated 9 93 1.5E-7 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal JO40_11640 3c0f58c3f2be64718b448af838346fe9 374 Pfam PF01609 Transposase DDE domain 107 340 1.4E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 JO40_11640 3c0f58c3f2be64718b448af838346fe9 374 Pfam PF13808 DDE_Tnp_1-associated 9 93 1.5E-7 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal JO40_00480 3c0f58c3f2be64718b448af838346fe9 374 Pfam PF01609 Transposase DDE domain 107 340 1.4E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 JO40_00480 3c0f58c3f2be64718b448af838346fe9 374 Pfam PF13808 DDE_Tnp_1-associated 9 93 1.5E-7 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 Gene3D G3DSA:1.20.120.430 132 472 2.0E-91 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 Gene3D G3DSA:3.30.1360.120 2 130 5.2E-38 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 Pfam PF01926 50S ribosome-binding GTPase 227 344 1.6E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 379 2.9E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 Gene3D G3DSA:3.40.50.300 226 400 2.0E-91 T 14-10-2018 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 SUPERFAMILY SSF52540 83 384 3.35E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 472 29.787 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 472 1.1E-113 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 Pfam PF12631 MnmE helical domain 133 469 1.1E-39 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 JO40_01380 3510ffa27edb271bda8bbfad544ddc4a 472 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 130 2.8E-32 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 JO40_05950 1f53fb79e59336cfb8266e4265530145 355 SUPERFAMILY SSF54106 171 214 2.49E-10 T 14-10-2018 JO40_05950 1f53fb79e59336cfb8266e4265530145 355 SUPERFAMILY SSF54106 120 165 1.7E-5 T 14-10-2018 JO40_05950 1f53fb79e59336cfb8266e4265530145 355 SMART SM00257 171 214 5.7E-13 T 14-10-2018 IPR018392 LysM domain JO40_05950 1f53fb79e59336cfb8266e4265530145 355 SMART SM00257 120 165 2.2E-9 T 14-10-2018 IPR018392 LysM domain JO40_05950 1f53fb79e59336cfb8266e4265530145 355 Pfam PF01551 Peptidase family M23 256 350 2.9E-31 T 14-10-2018 IPR016047 Peptidase M23 JO40_05950 1f53fb79e59336cfb8266e4265530145 355 Gene3D G3DSA:2.70.70.10 218 355 1.7E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_05950 1f53fb79e59336cfb8266e4265530145 355 SUPERFAMILY SSF51261 204 354 4.6E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_05950 1f53fb79e59336cfb8266e4265530145 355 Pfam PF01476 LysM domain 172 214 5.7E-12 T 14-10-2018 IPR018392 LysM domain JO40_05950 1f53fb79e59336cfb8266e4265530145 355 Pfam PF01476 LysM domain 121 165 3.2E-9 T 14-10-2018 IPR018392 LysM domain JO40_05950 1f53fb79e59336cfb8266e4265530145 355 Gene3D G3DSA:3.10.350.10 169 217 1.7E-13 T 14-10-2018 IPR036779 LysM domain superfamily JO40_05950 1f53fb79e59336cfb8266e4265530145 355 Gene3D G3DSA:3.10.350.10 114 168 9.5E-10 T 14-10-2018 IPR036779 LysM domain superfamily JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Gene3D G3DSA:1.25.40.10 230 332 4.6E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Gene3D G3DSA:1.25.40.10 163 229 3.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Pfam PF13181 Tetratricopeptide repeat 268 298 0.16 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Pfam PF13181 Tetratricopeptide repeat 232 264 0.013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Pfam PF13432 Tetratricopeptide repeat 168 219 0.001 T 14-10-2018 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Pfam PF14559 Tetratricopeptide repeat 105 157 8.4E-9 T 14-10-2018 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 127 160 1.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 93 126 0.0013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 59 92 2.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 231 264 2.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 195 228 0.62 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 265 298 0.031 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 161 194 0.0043 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 366 399 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SMART SM00028 299 332 0.21 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Gene3D G3DSA:1.25.40.10 333 411 2.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SUPERFAMILY SSF48452 262 387 8.67E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Pfam PF00515 Tetratricopeptide repeat 302 329 2.5E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 SUPERFAMILY SSF81901 64 301 2.12E-38 T 14-10-2018 JO40_07765 8651729130fbdf9aa3f62a694c803d8d 414 Gene3D G3DSA:1.25.40.10 43 162 3.1E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 Gene3D G3DSA:3.40.1770.10 95 637 2.7E-213 T 14-10-2018 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 PIRSF PIRSF001423 75 659 1.3E-181 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 Pfam PF01175 Urocanase Rossmann-like domain 217 439 1.4E-82 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 Gene3D G3DSA:3.40.50.10730 218 440 2.7E-213 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 Pfam PF17391 Urocanase N-terminal domain 89 214 2.2E-51 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 Pfam PF17392 Urocanase C-terminal domain 444 640 6.5E-82 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 ProSitePatterns PS01233 Urocanase signature. 538 553 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 Hamap MF_00577 Urocanate hydratase [hutU]. 59 660 43.296 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 TIGRFAM TIGR01228 hutU: urocanate hydratase 98 640 4.0E-135 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_07420 ad53750ce134bb6490fba4a0d4e1de03 675 SUPERFAMILY SSF111326 80 648 7.19E-225 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_00180 a7099b29d8c13d66d1e35a20556c55a9 439 Gene3D G3DSA:3.40.190.10 24 436 1.2E-49 T 14-10-2018 JO40_00180 a7099b29d8c13d66d1e35a20556c55a9 439 SUPERFAMILY SSF53850 24 437 6.86E-49 T 14-10-2018 JO40_00180 a7099b29d8c13d66d1e35a20556c55a9 439 Pfam PF01547 Bacterial extracellular solute-binding protein 53 351 2.7E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 377 4.8E-101 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 PIRSF PIRSF005962 2 397 7.3E-124 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 SUPERFAMILY SSF53187 3 394 1.32E-77 T 14-10-2018 JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 Pfam PF01546 Peptidase family M20/M25/M40 73 390 2.8E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 Pfam PF07687 Peptidase dimerisation domain 191 285 1.4E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 Gene3D G3DSA:3.30.70.360 186 300 1.0E-131 T 14-10-2018 JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 Gene3D G3DSA:3.40.630.10 15 377 1.0E-131 T 14-10-2018 JO40_04015 e801656c05dea72a5f850361a1e1ef2f 400 SUPERFAMILY SSF55031 189 293 1.26E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 Gene3D G3DSA:3.30.70.580 5 117 3.5E-32 T 14-10-2018 JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 Pfam PF01416 tRNA pseudouridine synthase 157 257 2.5E-17 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 Pfam PF01416 tRNA pseudouridine synthase 15 116 1.5E-9 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 8 256 30.277 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 PIRSF PIRSF001430 7 267 2.4E-69 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 Gene3D G3DSA:3.30.70.660 118 255 5.3E-34 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 9 251 4.5E-48 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_07510 29f2c0067528ddb3446688d5f67710ca 268 SUPERFAMILY SSF55120 7 262 3.45E-70 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 Gene3D G3DSA:3.30.479.30 45 177 5.5E-41 T 14-10-2018 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 PRINTS PR00721 Stomatin signature 107 124 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 PRINTS PR00721 Stomatin signature 151 169 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 PRINTS PR00721 Stomatin signature 170 191 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 PRINTS PR00721 Stomatin signature 24 46 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 PRINTS PR00721 Stomatin signature 72 93 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 PRINTS PR00721 Stomatin signature 127 150 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 Pfam PF16200 C-terminal region of band_7 240 290 2.7E-11 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 Pfam PF01145 SPFH domain / Band 7 family 21 190 1.9E-29 T 14-10-2018 IPR001107 Band 7 domain JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 SUPERFAMILY SSF117892 49 182 2.88E-40 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO40_01840 7f4dc5c802ee808d12d7f0ff3eb6f84d 309 SMART SM00244 17 175 9.2E-58 T 14-10-2018 IPR001107 Band 7 domain JO40_07200 91b0507a0f938c32af28d0965cd0d1b5 930 Gene3D G3DSA:3.40.50.300 369 521 1.9E-7 T 14-10-2018 JO40_07200 91b0507a0f938c32af28d0965cd0d1b5 930 SUPERFAMILY SSF52540 19 260 3.03E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07200 91b0507a0f938c32af28d0965cd0d1b5 930 Pfam PF04851 Type III restriction enzyme, res subunit 30 255 2.9E-29 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_07200 91b0507a0f938c32af28d0965cd0d1b5 930 SUPERFAMILY SSF52540 64 499 7.25E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07200 91b0507a0f938c32af28d0965cd0d1b5 930 SMART SM00487 28 281 4.6E-7 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_07200 91b0507a0f938c32af28d0965cd0d1b5 930 Gene3D G3DSA:3.40.50.300 25 279 2.1E-14 T 14-10-2018 JO40_06610 2d863c17521e700abc4ecfc8fd069f62 105 Pfam PF00085 Thioredoxin 2 103 2.3E-19 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 JO40_06610 2d863c17521e700abc4ecfc8fd069f62 105 PIRSF PIRSF000077 1 105 2.6E-22 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JO40_06610 2d863c17521e700abc4ecfc8fd069f62 105 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JO40_06610 2d863c17521e700abc4ecfc8fd069f62 105 SUPERFAMILY SSF52833 2 104 1.36E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO40_06610 2d863c17521e700abc4ecfc8fd069f62 105 Gene3D G3DSA:3.40.30.10 1 105 4.9E-23 T 14-10-2018 JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 Gene3D G3DSA:3.40.47.10 253 399 2.0E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 251 365 3.2E-38 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 Gene3D G3DSA:3.40.47.10 1 251 4.4E-89 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 243 3.1E-53 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 SUPERFAMILY SSF53901 2 364 8.05E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 SMART SM00825 Beta-ketoacyl synthase 4 380 7.4E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 PIRSF PIRSF000447 1 411 5.0E-163 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 JO40_05240 f78e47cba45bf0d6596abc69dc914772 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 408 4.1E-174 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 JO40_09365 32e5339ae807ee79bafe5afe2fae21c4 308 Hamap MF_01818 Ribonuclease BN [rbn]. 3 304 36.084 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 JO40_09365 32e5339ae807ee79bafe5afe2fae21c4 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 6 303 2.2E-111 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 JO40_09365 32e5339ae807ee79bafe5afe2fae21c4 308 Gene3D G3DSA:3.60.15.10 3 304 8.4E-91 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_09365 32e5339ae807ee79bafe5afe2fae21c4 308 Pfam PF12706 Beta-lactamase superfamily domain 201 270 1.5E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_09365 32e5339ae807ee79bafe5afe2fae21c4 308 SUPERFAMILY SSF56281 7 304 2.62E-78 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_09365 32e5339ae807ee79bafe5afe2fae21c4 308 Pfam PF00753 Metallo-beta-lactamase superfamily 22 75 3.7E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_09365 32e5339ae807ee79bafe5afe2fae21c4 308 SMART SM00849 20 233 0.0076 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 414 26.616 T 14-10-2018 IPR020823 Cell division protein FtsA JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 SUPERFAMILY SSF53067 200 379 1.46E-36 T 14-10-2018 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 SMART SM00842 6 197 1.5E-75 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 SUPERFAMILY SSF53067 4 212 1.58E-48 T 14-10-2018 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Pfam PF02491 SHS2 domain inserted in FTSA 81 163 1.3E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 379 4.5E-125 T 14-10-2018 IPR020823 Cell division protein FtsA JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Gene3D G3DSA:3.90.640.10 236 301 3.8E-103 T 14-10-2018 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Gene3D G3DSA:3.30.420.40 198 354 3.8E-103 T 14-10-2018 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Gene3D G3DSA:3.30.420.40 9 374 3.8E-103 T 14-10-2018 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Pfam PF14450 Cell division protein FtsA 208 376 7.2E-19 T 14-10-2018 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Gene3D G3DSA:3.30.1490.110 83 170 3.8E-103 T 14-10-2018 JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 PIRSF PIRSF003101 1 414 2.8E-125 T 14-10-2018 IPR020823 Cell division protein FtsA JO40_13365 b76d2a21de1778c33fa279cf28901cf6 414 Pfam PF14450 Cell division protein FtsA 7 176 2.7E-8 T 14-10-2018 JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 363 376 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 Gene3D G3DSA:1.10.10.10 593 670 5.5E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 Pfam PF00158 Sigma-54 interaction domain 339 507 6.3E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 Gene3D G3DSA:1.10.8.60 512 583 7.3E-14 T 14-10-2018 JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 Pfam PF00989 PAS fold 214 257 5.9E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 SMART SM00091 212 278 0.0021 T 14-10-2018 IPR000014 PAS domain JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 SUPERFAMILY SSF55785 211 262 6.63E-8 T 14-10-2018 IPR035965 PAS domain superfamily JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 Gene3D G3DSA:3.30.450.20 214 313 3.7E-11 T 14-10-2018 JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 SMART SM00382 359 503 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 426 441 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 SUPERFAMILY SSF52540 338 576 3.96E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00365 7fe823d2bffed4f998557121ca6c3b04 670 Gene3D G3DSA:3.40.50.300 325 511 4.6E-64 T 14-10-2018 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 153 167 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 SUPERFAMILY SSF89095 313 419 9.59E-32 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 8 492 35.262 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 Pfam PF02637 GatB domain 345 491 8.2E-52 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 8 491 3.6E-169 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 Gene3D G3DSA:1.10.10.410 431 493 3.5E-22 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 Pfam PF02934 GatB/GatE catalytic domain 12 304 3.4E-103 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 SMART SM00845 344 491 1.5E-67 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 Gene3D G3DSA:1.10.150.380 313 430 2.5E-37 T 14-10-2018 JO40_02860 537b38fee2880ff84f83ed7f4373d6f2 493 SUPERFAMILY SSF55931 10 310 7.19E-101 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JO40_11310 f46c4d39f02459f061484b7be65fb1e9 246 Pfam PF04402 Protein of unknown function (DUF541) 35 243 1.9E-39 T 14-10-2018 IPR007497 Protein of unknown function DUF541 JO40_11310 f46c4d39f02459f061484b7be65fb1e9 246 Gene3D G3DSA:3.30.70.2970 47 154 2.4E-38 T 14-10-2018 JO40_11310 f46c4d39f02459f061484b7be65fb1e9 246 Gene3D G3DSA:3.30.110.170 37 244 2.4E-38 T 14-10-2018 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 40 122 6.6E-22 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 SUPERFAMILY SSF51971 223 467 1.12E-57 T 14-10-2018 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 SUPERFAMILY SSF46548 102 235 4.76E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 226 520 7.0E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 Gene3D G3DSA:1.10.1060.10 82 225 1.3E-23 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 Gene3D G3DSA:3.50.50.60 323 466 2.0E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_11360 fe42fb389f70bfeea544bccc76223187 609 SUPERFAMILY SSF140490 34 130 3.01E-25 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 SMART SM00928 37 82 1.9E-13 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 SUPERFAMILY SSF51971 442 531 5.41E-5 T 14-10-2018 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 PRINTS PR00419 Adrenodoxin reductase family signature 358 372 7.0E-15 T 14-10-2018 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 PRINTS PR00419 Adrenodoxin reductase family signature 226 248 7.0E-15 T 14-10-2018 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 PRINTS PR00419 Adrenodoxin reductase family signature 249 262 7.0E-15 T 14-10-2018 JO40_11360 fe42fb389f70bfeea544bccc76223187 609 Gene3D G3DSA:3.50.50.60 228 526 2.0E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_11360 fe42fb389f70bfeea544bccc76223187 609 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 130 211 3.3E-16 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Gene3D G3DSA:3.80.10.10 484 661 4.3E-41 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Gene3D G3DSA:3.80.10.10 237 337 2.3E-12 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Gene3D G3DSA:3.80.10.10 829 896 3.4E-9 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 SUPERFAMILY SSF52058 706 867 6.38E-22 T 14-10-2018 JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Gene3D G3DSA:3.80.10.10 689 828 1.3E-28 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Gene3D G3DSA:3.80.10.10 2 201 3.4E-38 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Gene3D G3DSA:3.80.10.10 338 483 1.8E-40 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 515 529 2.6E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 SUPERFAMILY SSF52058 40 170 5.92E-20 T 14-10-2018 JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 SUPERFAMILY SSF52058 267 605 3.16E-43 T 14-10-2018 JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Pfam PF13306 Leucine rich repeats (6 copies) 531 636 4.5E-22 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Pfam PF13306 Leucine rich repeats (6 copies) 699 818 2.5E-19 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Pfam PF13306 Leucine rich repeats (6 copies) 31 144 3.0E-23 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO40_05040 b70ac06624b6856a82baf467a2ab3e75 925 Pfam PF13306 Leucine rich repeats (6 copies) 316 448 1.4E-26 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 Gene3D G3DSA:3.40.50.300 328 583 4.2E-83 T 14-10-2018 JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 SMART SM00382 371 556 2.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 SUPERFAMILY SSF52540 338 581 5.85E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 Pfam PF00005 ABC transporter 362 509 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 Gene3D G3DSA:1.20.1560.10 1 327 3.4E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 Pfam PF00664 ABC transporter transmembrane region 23 289 3.4E-22 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_09400 ea80a404e89ff07202f3630b70e51c79 595 SUPERFAMILY SSF90123 13 325 2.49E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05540 a72dd88a2633df1251f84a4d6155e18a 149 SUPERFAMILY SSF52218 1 146 1.45E-13 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_05540 a72dd88a2633df1251f84a4d6155e18a 149 Gene3D G3DSA:3.40.50.360 3 148 1.2E-8 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_05540 a72dd88a2633df1251f84a4d6155e18a 149 Pfam PF12724 Flavodoxin domain 6 104 4.8E-10 T 14-10-2018 IPR026816 Flavodoxin domain JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 Pfam PF13365 Trypsin-like peptidase domain 132 271 1.3E-34 T 14-10-2018 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 Gene3D G3DSA:2.40.10.120 86 307 8.6E-73 T 14-10-2018 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 SUPERFAMILY SSF50156 269 411 6.76E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 Pfam PF13180 PDZ domain 332 420 2.8E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 SUPERFAMILY SSF50494 97 307 3.8E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 Gene3D G3DSA:2.30.42.10 309 424 9.1E-22 T 14-10-2018 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 SMART SM00228 310 411 1.1E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 PRINTS PR00834 HtrA/DegQ protease family signature 141 153 6.7E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 PRINTS PR00834 HtrA/DegQ protease family signature 369 381 6.7E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 PRINTS PR00834 HtrA/DegQ protease family signature 205 229 6.7E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 6.7E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 PRINTS PR00834 HtrA/DegQ protease family signature 264 281 6.7E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_09275 62eb3c54990d718c0760e25b4b63ac40 424 PRINTS PR00834 HtrA/DegQ protease family signature 162 182 6.7E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_11175 c855e6a7ad917f44f5bd2fb258339d57 179 Gene3D G3DSA:2.40.10.330 71 121 9.1E-51 T 14-10-2018 JO40_11175 c855e6a7ad917f44f5bd2fb258339d57 179 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 137 2.3E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JO40_11175 c855e6a7ad917f44f5bd2fb258339d57 179 Gene3D G3DSA:3.10.50.40 3 149 9.1E-51 T 14-10-2018 JO40_11175 c855e6a7ad917f44f5bd2fb258339d57 179 SUPERFAMILY SSF54534 2 140 7.66E-34 T 14-10-2018 JO40_04460 02a2840f0050605011c5ac439e3a453b 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 59.128 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 JO40_04460 02a2840f0050605011c5ac439e3a453b 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 9 353 2.0E-15 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JO40_04460 02a2840f0050605011c5ac439e3a453b 360 SUPERFAMILY SSF52540 7 328 6.46E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04460 02a2840f0050605011c5ac439e3a453b 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 9 352 2.0E-65 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 JO40_04460 02a2840f0050605011c5ac439e3a453b 360 Gene3D G3DSA:1.20.1050.90 120 298 8.2E-77 T 14-10-2018 JO40_04460 02a2840f0050605011c5ac439e3a453b 360 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 JO40_04460 02a2840f0050605011c5ac439e3a453b 360 Gene3D G3DSA:3.40.50.300 9 330 8.2E-77 T 14-10-2018 JO40_01905 b51fce54758f550c5f1e164d41daba6f 340 SUPERFAMILY SSF52540 7 284 4.17E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01905 b51fce54758f550c5f1e164d41daba6f 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 264 307 9.7E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_01905 b51fce54758f550c5f1e164d41daba6f 340 SMART SM00382 36 262 9.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01905 b51fce54758f550c5f1e164d41daba6f 340 Pfam PF00005 ABC transporter 28 212 3.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_01905 b51fce54758f550c5f1e164d41daba6f 340 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_01120 f42d839db289e4a26abc87188f3efb44 260 SUPERFAMILY SSF52540 2 225 3.33E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01120 f42d839db289e4a26abc87188f3efb44 260 SMART SM00382 30 212 3.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01120 f42d839db289e4a26abc87188f3efb44 260 Gene3D G3DSA:3.40.50.300 1 236 2.0E-53 T 14-10-2018 JO40_01120 f42d839db289e4a26abc87188f3efb44 260 Pfam PF00005 ABC transporter 22 164 2.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_10540 039c74a87d66337fcfcab7aba076c23c 641 SUPERFAMILY SSF56801 8 639 2.88E-105 T 14-10-2018 JO40_10540 039c74a87d66337fcfcab7aba076c23c 641 Pfam PF00501 AMP-binding enzyme 14 510 1.2E-102 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO40_10540 039c74a87d66337fcfcab7aba076c23c 641 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 14-10-2018 IPR020845 AMP-binding, conserved site JO40_10540 039c74a87d66337fcfcab7aba076c23c 641 Gene3D G3DSA:3.40.50.12780 2 304 6.2E-46 T 14-10-2018 JO40_10540 039c74a87d66337fcfcab7aba076c23c 641 Gene3D G3DSA:3.40.50.12780 349 499 3.1E-35 T 14-10-2018 JO40_02230 79dd3a0496b5a9f23f294056e1bad861 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 120 6.3E-38 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02230 79dd3a0496b5a9f23f294056e1bad861 120 SUPERFAMILY SSF53137 8 118 1.55E-42 T 14-10-2018 JO40_02230 79dd3a0496b5a9f23f294056e1bad861 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 120 1.2E-41 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02230 79dd3a0496b5a9f23f294056e1bad861 120 Gene3D G3DSA:3.30.420.100 6 120 3.0E-39 T 14-10-2018 JO40_02230 79dd3a0496b5a9f23f294056e1bad861 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 7 120 26.169 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_05560 8751719697ca63a531a30808086fe325 254 SUPERFAMILY SSF53335 9 245 6.08E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_05560 8751719697ca63a531a30808086fe325 254 Gene3D G3DSA:3.40.50.150 4 226 4.2E-38 T 14-10-2018 JO40_05560 8751719697ca63a531a30808086fe325 254 Pfam PF08241 Methyltransferase domain 49 144 1.6E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JO40_05215 c664191329223a1d218dd347631b3cd9 543 Gene3D G3DSA:1.20.1270.20 1 138 2.2E-34 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO40_05215 c664191329223a1d218dd347631b3cd9 543 Hamap MF_00069 Hydroxylamine reductase [hcp]. 4 543 22.281 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JO40_05215 c664191329223a1d218dd347631b3cd9 543 SUPERFAMILY SSF56821 3 541 5.49E-199 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 JO40_05215 c664191329223a1d218dd347631b3cd9 543 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 4 541 4.7E-218 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JO40_05215 c664191329223a1d218dd347631b3cd9 543 Gene3D G3DSA:3.40.50.2030 224 372 3.7E-67 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO40_05215 c664191329223a1d218dd347631b3cd9 543 Gene3D G3DSA:3.40.50.2030 373 542 7.6E-61 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO40_05215 c664191329223a1d218dd347631b3cd9 543 Gene3D G3DSA:1.20.1270.20 139 222 1.9E-32 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO40_05215 c664191329223a1d218dd347631b3cd9 543 Pfam PF03063 Prismane/CO dehydrogenase family 4 539 1.4E-167 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 JO40_05215 c664191329223a1d218dd347631b3cd9 543 PIRSF PIRSF000076 4 543 9.4E-246 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 SUPERFAMILY SSF52374 121 460 5.91E-81 T 14-10-2018 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 Gene3D G3DSA:3.40.50.620 122 466 4.6E-114 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 SMART SM01016 6 94 7.7E-14 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 Pfam PF00750 tRNA synthetases class I (R) 105 452 1.1E-52 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 94 2.6E-14 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 12 590 8.8E-155 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 5.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 5.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 5.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 313 334 5.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 143 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 Gene3D G3DSA:1.10.730.10 467 590 2.0E-33 T 14-10-2018 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 SMART SM00836 468 590 3.9E-40 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 Gene3D G3DSA:3.30.1360.70 2 115 1.9E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 SUPERFAMILY SSF55190 2 115 1.31E-20 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 590 26.388 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 SUPERFAMILY SSF47323 462 590 2.49E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_07945 14cb0c2088f93d0fac9f91c75c74ad7d 590 Pfam PF05746 DALR anticodon binding domain 468 590 4.5E-29 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 Gene3D G3DSA:3.40.50.12740 1 201 8.3E-59 T 14-10-2018 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 SUPERFAMILY SSF52172 1 115 8.54E-27 T 14-10-2018 IPR011006 CheY-like superfamily JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 Pfam PF00072 Response regulator receiver domain 3 111 7.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 SUPERFAMILY SSF46894 135 199 2.45E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 197 2.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 SMART SM00448 1 112 1.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO40_04025 1b976a6a69c0e9c0d1263400be6c3461 201 SMART SM00421 141 198 9.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO40_07095 feec8df92d3da327990c8dcdb1129679 291 Pfam PF04055 Radical SAM superfamily 17 180 1.2E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_07095 feec8df92d3da327990c8dcdb1129679 291 Gene3D G3DSA:3.80.30.30 49 190 2.8E-6 T 14-10-2018 JO40_07095 feec8df92d3da327990c8dcdb1129679 291 SUPERFAMILY SSF102114 17 199 7.59E-10 T 14-10-2018 JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 Pfam PF13307 Helicase C-terminal domain 405 475 7.4E-9 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 Gene3D G3DSA:3.40.50.300 362 507 1.3E-9 T 14-10-2018 JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 SUPERFAMILY SSF52540 53 486 7.38E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 SMART SM00487 31 199 3.2E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 Pfam PF04851 Type III restriction enzyme, res subunit 35 140 2.9E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 Gene3D G3DSA:3.40.50.300 29 196 3.2E-13 T 14-10-2018 JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 SUPERFAMILY SSF52540 29 165 4.81E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11380 dd94c868039fcacf91c6a8cc852610b5 845 SMART SM00491 362 478 5.7E-10 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JO40_13375 74d72b694c3f5de46b17ad6db1e10f90 377 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 17 369 2.2E-109 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_13375 74d72b694c3f5de46b17ad6db1e10f90 377 Pfam PF01098 Cell cycle protein 23 372 2.1E-93 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_13350 dcc402b939b2183f6fadf28d54cbadb7 240 Gene3D G3DSA:1.25.40.10 45 121 1.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_13350 dcc402b939b2183f6fadf28d54cbadb7 240 Gene3D G3DSA:1.25.40.10 123 237 5.9E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_13350 dcc402b939b2183f6fadf28d54cbadb7 240 Pfam PF13174 Tetratricopeptide repeat 191 216 0.0026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_13350 dcc402b939b2183f6fadf28d54cbadb7 240 Pfam PF07719 Tetratricopeptide repeat 70 101 1.7E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 JO40_13350 dcc402b939b2183f6fadf28d54cbadb7 240 SMART SM00028 68 101 0.044 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_13350 dcc402b939b2183f6fadf28d54cbadb7 240 SMART SM00028 188 221 0.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_13350 dcc402b939b2183f6fadf28d54cbadb7 240 SUPERFAMILY SSF48452 70 218 1.06E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 263 2.4E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 SUPERFAMILY SSF88946 2 110 1.28E-32 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 PRINTS PR00046 Major sigma-70 factor signature 90 98 2.6E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 PRINTS PR00046 Major sigma-70 factor signature 214 226 2.6E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 PRINTS PR00046 Major sigma-70 factor signature 236 251 2.6E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 PRINTS PR00046 Major sigma-70 factor signature 66 79 2.6E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 PRINTS PR00046 Major sigma-70 factor signature 251 262 2.6E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 Pfam PF00140 Sigma-70 factor, region 1.2 8 36 4.0E-7 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 Gene3D G3DSA:1.10.10.10 115 190 2.8E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 Pfam PF04545 Sigma-70, region 4 210 264 9.7E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 SUPERFAMILY SSF88659 115 188 1.61E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 Pfam PF04542 Sigma-70 region 2 42 109 4.3E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 Gene3D G3DSA:1.10.10.10 193 272 5.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 Gene3D G3DSA:1.10.601.10 3 110 2.4E-30 T 14-10-2018 JO40_06295 2809cebfbf7292d2cb47f9df9525b4b8 275 SUPERFAMILY SSF88659 174 266 1.31E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_12935 8661d33b64ab23d54fb93a539bb97774 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 5.9E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_12935 8661d33b64ab23d54fb93a539bb97774 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 316 5.3E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_12935 8661d33b64ab23d54fb93a539bb97774 328 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_12935 8661d33b64ab23d54fb93a539bb97774 328 Gene3D G3DSA:3.40.50.300 1 328 5.2E-99 T 14-10-2018 JO40_12935 8661d33b64ab23d54fb93a539bb97774 328 SMART SM00382 33 232 3.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12935 8661d33b64ab23d54fb93a539bb97774 328 Pfam PF00005 ABC transporter 25 182 2.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_12935 8661d33b64ab23d54fb93a539bb97774 328 SUPERFAMILY SSF52540 4 253 4.11E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11005 9a046f1eab26196185da24717c5a757f 297 Gene3D G3DSA:3.10.350.10 20 75 1.9E-16 T 14-10-2018 IPR036779 LysM domain superfamily JO40_11005 9a046f1eab26196185da24717c5a757f 297 Gene3D G3DSA:3.10.350.10 76 146 8.7E-18 T 14-10-2018 IPR036779 LysM domain superfamily JO40_11005 9a046f1eab26196185da24717c5a757f 297 SMART SM00257 86 130 4.2E-13 T 14-10-2018 IPR018392 LysM domain JO40_11005 9a046f1eab26196185da24717c5a757f 297 SMART SM00257 25 69 3.5E-14 T 14-10-2018 IPR018392 LysM domain JO40_11005 9a046f1eab26196185da24717c5a757f 297 Pfam PF01476 LysM domain 26 69 2.9E-14 T 14-10-2018 IPR018392 LysM domain JO40_11005 9a046f1eab26196185da24717c5a757f 297 Pfam PF01476 LysM domain 87 130 2.7E-13 T 14-10-2018 IPR018392 LysM domain JO40_11005 9a046f1eab26196185da24717c5a757f 297 Gene3D G3DSA:2.70.70.10 161 293 2.5E-20 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_11005 9a046f1eab26196185da24717c5a757f 297 SUPERFAMILY SSF51261 87 291 4.03E-22 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_11005 9a046f1eab26196185da24717c5a757f 297 Pfam PF01551 Peptidase family M23 197 290 1.5E-17 T 14-10-2018 IPR016047 Peptidase M23 JO40_11005 9a046f1eab26196185da24717c5a757f 297 SUPERFAMILY SSF54106 24 70 7.59E-11 T 14-10-2018 JO40_11550 e17b251ad52a9398311d96136ff40c1d 246 Pfam PF00005 ABC transporter 29 161 2.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_11550 e17b251ad52a9398311d96136ff40c1d 246 Gene3D G3DSA:3.40.50.300 2 241 1.3E-50 T 14-10-2018 JO40_11550 e17b251ad52a9398311d96136ff40c1d 246 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_11550 e17b251ad52a9398311d96136ff40c1d 246 SMART SM00382 38 213 8.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11550 e17b251ad52a9398311d96136ff40c1d 246 SUPERFAMILY SSF52540 5 222 5.79E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 Gene3D G3DSA:3.30.70.890 164 272 1.7E-22 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 Pfam PF00288 GHMP kinases N terminal domain 88 141 6.3E-8 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 283 30.91 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 SUPERFAMILY SSF55060 164 278 6.12E-21 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 265 4.0E-55 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 PIRSF PIRSF010376 4 279 7.0E-75 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 Pfam PF08544 GHMP kinases C terminal 218 269 2.8E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 Gene3D G3DSA:3.30.230.10 1 160 3.8E-51 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_13020 a65cd49ef66f9f93d1bff07aef6888bf 283 SUPERFAMILY SSF54211 6 156 2.13E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 Gene3D G3DSA:3.90.180.10 21 335 1.2E-83 T 14-10-2018 JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 SMART SM00829 12 346 0.001 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 Gene3D G3DSA:3.40.50.720 159 294 1.2E-83 T 14-10-2018 JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 Pfam PF00107 Zinc-binding dehydrogenase 183 310 1.4E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 SUPERFAMILY SSF51735 145 317 6.85E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 SUPERFAMILY SSF50129 5 180 1.02E-40 T 14-10-2018 IPR011032 GroES-like superfamily JO40_06245 792e2d9c5fd593a24eca3dbf1780d60f 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 140 2.1E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 SUPERFAMILY SSF50104 128 269 1.2E-57 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 SMART SM01383 42 118 1.3E-44 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 9.1E-54 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 3.9E-128 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.01 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 Gene3D G3DSA:4.10.950.10 197 274 3.2E-36 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 Gene3D G3DSA:2.30.30.30 118 196 2.0E-29 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 4.1E-32 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 SUPERFAMILY SSF50249 2 123 7.2E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 Gene3D G3DSA:2.40.50.140 1 114 6.6E-45 T 14-10-2018 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 SMART SM01382 124 251 5.3E-84 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JO40_02290 76bc62c2429b2100f1c83f53ca232af3 275 PIRSF PIRSF002158 5 274 3.0E-97 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10450 c6b6746eee2e96b607e8a3de99efc212 123 SUPERFAMILY SSF118010 3 121 5.62E-16 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily JO40_10450 c6b6746eee2e96b607e8a3de99efc212 123 Gene3D G3DSA:3.30.70.1490 1 123 7.5E-14 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily JO40_10450 c6b6746eee2e96b607e8a3de99efc212 123 Pfam PF04327 Cysteine protease Prp 2 118 5.9E-22 T 14-10-2018 IPR007422 Cysteine protease Prp JO40_10765 292035521a55338db69b6698fa9a5286 589 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 220 440 9.8E-76 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_10765 292035521a55338db69b6698fa9a5286 589 Gene3D G3DSA:2.40.50.100 119 191 1.8E-155 T 14-10-2018 JO40_10765 292035521a55338db69b6698fa9a5286 589 Gene3D G3DSA:3.40.50.300 77 440 1.8E-155 T 14-10-2018 JO40_10765 292035521a55338db69b6698fa9a5286 589 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 88 209 2.8E-35 T 14-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_10765 292035521a55338db69b6698fa9a5286 589 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 3 584 44.806 T 14-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_10765 292035521a55338db69b6698fa9a5286 589 Gene3D G3DSA:2.40.30.20 3 75 3.5E-12 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_10765 292035521a55338db69b6698fa9a5286 589 SUPERFAMILY SSF52540 172 444 3.63E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10765 292035521a55338db69b6698fa9a5286 589 Gene3D G3DSA:1.10.1140.10 448 579 2.0E-14 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_10765 292035521a55338db69b6698fa9a5286 589 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 72 1.2E-8 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_10765 292035521a55338db69b6698fa9a5286 589 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 431 440 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Pfam PF00488 MutS domain V 647 826 4.4E-80 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Gene3D G3DSA:3.40.1170.10 1 106 5.6E-39 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Gene3D G3DSA:3.40.50.300 574 884 3.2E-91 T 14-10-2018 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 891 22.498 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 PIRSF PIRSF037677 1 875 3.4E-157 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Gene3D G3DSA:3.30.420.110 112 267 1.5E-32 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 724 740 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Pfam PF05188 MutS domain II 113 257 1.2E-19 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 SUPERFAMILY SSF55271 1 100 6.41E-34 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 SMART SM00533 289 598 9.8E-86 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Gene3D G3DSA:1.10.1420.10 406 541 3.6E-79 T 14-10-2018 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 SUPERFAMILY SSF52540 573 827 1.33E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Gene3D G3DSA:1.10.1420.10 271 566 3.6E-79 T 14-10-2018 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 SUPERFAMILY SSF53150 99 271 7.06E-32 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 SMART SM00534 643 828 1.7E-111 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Pfam PF05192 MutS domain III 274 565 3.2E-35 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Pfam PF01624 MutS domain I 1 104 1.1E-35 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 SUPERFAMILY SSF48334 272 570 3.66E-73 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JO40_05145 a8cb07b4d1fa5a87e51fdd82c37064be 902 Pfam PF05190 MutS family domain IV 434 525 1.9E-22 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 Gene3D G3DSA:3.40.50.300 99 293 1.4E-45 T 14-10-2018 JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 Pfam PF00271 Helicase conserved C-terminal domain 317 421 3.5E-16 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 SUPERFAMILY SSF52540 152 439 1.3E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 SMART SM00490 339 422 6.0E-21 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 124 513 3.7E-79 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 SMART SM00487 53 306 9.2E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 Pfam PF00270 DEAD/DEAH box helicase 128 277 1.8E-10 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO40_06490 277d32c26a7ac2dde2782d8904fbe613 567 Gene3D G3DSA:3.40.50.300 300 507 1.8E-43 T 14-10-2018 JO40_03080 378e2b7d16c9150aa65fc8daa0857130 195 SMART SM00860 40 189 5.7E-10 T 14-10-2018 IPR018958 Knr4/Smi1-like domain JO40_03080 378e2b7d16c9150aa65fc8daa0857130 195 Gene3D G3DSA:3.40.1580.10 27 194 1.3E-14 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily JO40_03080 378e2b7d16c9150aa65fc8daa0857130 195 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 40 188 4.0E-22 T 14-10-2018 IPR018958 Knr4/Smi1-like domain JO40_03080 378e2b7d16c9150aa65fc8daa0857130 195 SUPERFAMILY SSF160631 29 193 2.35E-19 T 14-10-2018 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 765 783 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 SUPERFAMILY SSF52009 376 483 7.85E-13 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Gene3D G3DSA:3.20.20.60 521 873 4.5E-135 T 14-10-2018 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Gene3D G3DSA:1.10.189.10 327 505 3.0E-29 T 14-10-2018 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 437 448 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Gene3D G3DSA:3.30.1490.20 18 207 3.4E-11 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 PIRSF PIRSF000853 3 881 3.8E-262 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 SUPERFAMILY SSF56059 6 359 1.41E-40 T 14-10-2018 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Gene3D G3DSA:3.30.470.20 231 320 2.7E-10 T 14-10-2018 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Gene3D G3DSA:3.50.30.10 364 494 3.0E-29 T 14-10-2018 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Pfam PF00391 PEP-utilising enzyme, mobile domain 409 483 4.1E-8 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Gene3D G3DSA:1.20.80.30 109 193 3.4E-11 T 14-10-2018 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 SUPERFAMILY SSF51621 522 875 7.68E-106 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO40_01985 b27c6e4b07943370550ce66f2481f561 932 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 873 7.0E-80 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 Gene3D G3DSA:1.10.10.10 130 212 3.5E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 Pfam PF00027 Cyclic nucleotide-binding domain 13 97 5.2E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 SUPERFAMILY SSF46785 130 207 8.47E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 Pfam PF13545 Crp-like helix-turn-helix domain 131 204 1.7E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 61 78 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 Gene3D G3DSA:2.60.120.10 2 125 2.7E-31 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 SUPERFAMILY SSF51206 12 120 2.23E-29 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_07285 38962e9e8e72fea8aa60a39cd8a7cf36 219 SMART SM00100 1 111 2.3E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_03265 132f1cabb612a806721c2acc2c045573 319 Pfam PF07224 Chlorophyllase 51 173 9.3E-5 T 14-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 JO40_03265 132f1cabb612a806721c2acc2c045573 319 SUPERFAMILY SSF53474 48 299 1.46E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_03265 132f1cabb612a806721c2acc2c045573 319 Gene3D G3DSA:3.40.50.1820 36 292 1.7E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 ProSitePatterns PS01071 grpE protein signature. 181 224 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 Gene3D G3DSA:3.90.20.20 49 167 4.2E-29 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 Pfam PF01025 GrpE 59 224 3.0E-46 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 Gene3D G3DSA:2.30.22.10 170 225 1.4E-18 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 SUPERFAMILY SSF51064 172 225 2.22E-16 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 SUPERFAMILY SSF58014 72 166 3.4E-24 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 Hamap MF_01151 Protein GrpE [grpE]. 16 226 19.023 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 PRINTS PR00773 GrpE protein signature 92 108 4.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 PRINTS PR00773 GrpE protein signature 178 193 4.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 PRINTS PR00773 GrpE protein signature 205 224 4.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO40_02600 c6365c70a36d6f9a42efaf4bf7f21167 248 PRINTS PR00773 GrpE protein signature 120 135 4.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 Gene3D G3DSA:1.25.40.10 74 220 9.6E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 Gene3D G3DSA:1.25.40.10 221 292 1.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 SUPERFAMILY SSF48452 154 371 3.41E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 Pfam PF13432 Tetratricopeptide repeat 230 286 3.3E-6 T 14-10-2018 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 Pfam PF04733 Coatomer epsilon subunit 293 355 4.1E-6 T 14-10-2018 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 Gene3D G3DSA:1.25.40.10 293 377 7.8E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 SMART SM00028 86 119 430.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 SMART SM00028 301 334 0.0014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 SMART SM00028 168 201 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 SMART SM00028 225 258 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 SMART SM00028 335 368 9.2E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_04580 1907d7863ccadcc988b0ce01421c9998 377 SMART SM00028 259 292 0.0035 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 SUPERFAMILY SSF50156 297 390 7.45E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 SUPERFAMILY SSF50494 65 306 8.8E-51 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 Gene3D G3DSA:2.40.10.120 63 290 5.3E-64 T 14-10-2018 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 SUPERFAMILY SSF50156 403 485 9.73E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 SMART SM00228 297 379 4.2E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 SMART SM00228 417 483 1.1E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 Pfam PF13180 PDZ domain 298 387 9.2E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 Pfam PF13180 PDZ domain 420 484 4.6E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 Pfam PF13365 Trypsin-like peptidase domain 119 258 8.7E-30 T 14-10-2018 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 Gene3D G3DSA:2.30.42.10 292 396 1.2E-25 T 14-10-2018 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 Gene3D G3DSA:2.30.42.60 397 492 2.5E-15 T 14-10-2018 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 PRINTS PR00834 HtrA/DegQ protease family signature 131 143 7.6E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 PRINTS PR00834 HtrA/DegQ protease family signature 152 172 7.6E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 7.6E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 PRINTS PR00834 HtrA/DegQ protease family signature 193 217 7.6E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 7.6E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 PRINTS PR00834 HtrA/DegQ protease family signature 337 349 7.6E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_01705 085bf2927912cbf595e5c290653fa3a0 493 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 65 485 1.9E-134 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 JO40_12775 cf2608845ce89341a9d2b59a16fb757a 321 Pfam PF01026 TatD related DNase 4 318 1.5E-43 T 14-10-2018 IPR001130 TatD family GO:0016788 JO40_12775 cf2608845ce89341a9d2b59a16fb757a 321 PIRSF PIRSF005902 1 321 1.1E-55 T 14-10-2018 IPR001130 TatD family GO:0016788 JO40_12775 cf2608845ce89341a9d2b59a16fb757a 321 SUPERFAMILY SSF51556 1 318 4.54E-51 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_12775 cf2608845ce89341a9d2b59a16fb757a 321 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 255 271 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PRINTS PR00473 Galactokinase signature 87 98 4.1E-8 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PRINTS PR00473 Galactokinase signature 24 42 4.1E-8 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PRINTS PR00473 Galactokinase signature 262 276 4.1E-8 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PRINTS PR00473 Galactokinase signature 107 125 4.1E-8 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 SUPERFAMILY SSF55060 201 379 4.32E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 SUPERFAMILY SSF54211 2 198 4.25E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PIRSF PIRSF000530 1 384 6.9E-83 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 Pfam PF10509 Galactokinase galactose-binding signature 8 54 3.2E-12 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PRINTS PR00959 Mevalonate kinase family signature 22 46 5.4E-18 T 14-10-2018 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PRINTS PR00959 Mevalonate kinase family signature 114 136 5.4E-18 T 14-10-2018 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 PRINTS PR00959 Mevalonate kinase family signature 331 348 5.4E-18 T 14-10-2018 JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 Gene3D G3DSA:3.30.70.890 197 359 7.1E-77 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 Gene3D G3DSA:3.30.230.10 18 196 7.1E-77 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_01695 7db523304eaeae25a5ccc2ce19a870dd 384 Pfam PF08544 GHMP kinases C terminal 278 353 5.3E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain JO40_01700 da5114cb60649565121685b6822c4019 527 Gene3D G3DSA:3.60.110.10 221 496 3.2E-23 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO40_01700 da5114cb60649565121685b6822c4019 527 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 58 468 8.6E-102 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JO40_01700 da5114cb60649565121685b6822c4019 527 Pfam PF00795 Carbon-nitrogen hydrolase 234 485 2.6E-23 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JO40_01700 da5114cb60649565121685b6822c4019 527 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 506 18.096 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JO40_01700 da5114cb60649565121685b6822c4019 527 SUPERFAMILY SSF56317 222 487 2.09E-44 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO40_12975 6b93977c8b4ecf6f6a729db923b25f67 387 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 376 1.7E-113 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO40_12975 6b93977c8b4ecf6f6a729db923b25f67 387 SUPERFAMILY SSF56014 291 365 1.05E-7 T 14-10-2018 JO40_12975 6b93977c8b4ecf6f6a729db923b25f67 387 Gene3D G3DSA:3.20.20.20 8 284 4.5E-80 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO40_12975 6b93977c8b4ecf6f6a729db923b25f67 387 Gene3D G3DSA:3.30.413.10 285 382 4.3E-27 T 14-10-2018 JO40_12975 6b93977c8b4ecf6f6a729db923b25f67 387 Pfam PF04551 GcpE protein 17 370 2.1E-115 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO40_12975 6b93977c8b4ecf6f6a729db923b25f67 387 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 8 382 29.989 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO40_12975 6b93977c8b4ecf6f6a729db923b25f67 387 PIRSF PIRSF004640 4 387 1.3E-133 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO40_09430 60dac0d01601ef59eb7007f4193236e9 143 Gene3D G3DSA:3.40.630.30 44 142 1.5E-20 T 14-10-2018 JO40_09430 60dac0d01601ef59eb7007f4193236e9 143 Pfam PF00583 Acetyltransferase (GNAT) family 37 126 3.1E-13 T 14-10-2018 IPR000182 GNAT domain JO40_09430 60dac0d01601ef59eb7007f4193236e9 143 SUPERFAMILY SSF55729 1 134 5.66E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_12375 4c7be4905b3e490f88bb6ee3dccc17eb 789 SUPERFAMILY SSF82866 204 388 1.06E-23 T 14-10-2018 JO40_12375 4c7be4905b3e490f88bb6ee3dccc17eb 789 Gene3D G3DSA:1.20.1640.10 216 400 6.8E-10 T 14-10-2018 JO40_12375 4c7be4905b3e490f88bb6ee3dccc17eb 789 Gene3D G3DSA:1.20.1640.10 611 789 8.0E-13 T 14-10-2018 JO40_12375 4c7be4905b3e490f88bb6ee3dccc17eb 789 SUPERFAMILY SSF82866 587 783 9.42E-29 T 14-10-2018 JO40_12375 4c7be4905b3e490f88bb6ee3dccc17eb 789 Pfam PF03176 MMPL family 575 778 2.9E-7 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO40_12375 4c7be4905b3e490f88bb6ee3dccc17eb 789 Pfam PF03176 MMPL family 139 391 6.0E-16 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO40_05340 30ba107acb49853ace667b5963da6492 597 SUPERFAMILY SSF52058 110 410 2.15E-34 T 14-10-2018 JO40_05340 30ba107acb49853ace667b5963da6492 597 SUPERFAMILY SSF52058 371 535 9.18E-14 T 14-10-2018 JO40_05340 30ba107acb49853ace667b5963da6492 597 Pfam PF08309 LVIVD repeat 399 412 2.3 T 14-10-2018 IPR013211 LVIVD JO40_05340 30ba107acb49853ace667b5963da6492 597 Gene3D G3DSA:3.80.10.10 331 595 5.8E-42 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_05340 30ba107acb49853ace667b5963da6492 597 Gene3D G3DSA:3.80.10.10 112 330 3.0E-46 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 PIRSF PIRSF004491 1 299 7.4E-84 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 SUPERFAMILY SSF52374 16 159 1.51E-17 T 14-10-2018 JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 SUPERFAMILY SSF82114 157 294 1.87E-34 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 Pfam PF01687 Riboflavin kinase 168 290 2.4E-26 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 SMART SM00904 167 293 3.0E-37 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 Pfam PF06574 FAD synthetase 13 150 7.8E-20 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 Gene3D G3DSA:2.40.30.30 172 299 6.0E-31 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 JO40_06255 c52fc04f5d4039386b5b1a356b693847 299 Gene3D G3DSA:3.40.50.620 1 171 9.7E-29 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_00215 4827a8c5e483877152e3402cb8668cd4 221 Pfam PF00005 ABC transporter 22 167 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00215 4827a8c5e483877152e3402cb8668cd4 221 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00215 4827a8c5e483877152e3402cb8668cd4 221 SUPERFAMILY SSF52540 2 218 5.74E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00215 4827a8c5e483877152e3402cb8668cd4 221 SMART SM00382 31 216 3.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00215 4827a8c5e483877152e3402cb8668cd4 221 Gene3D G3DSA:3.40.50.300 1 221 3.3E-60 T 14-10-2018 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 447 1.9E-12 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 Pfam PF00206 Lyase 49 313 1.5E-37 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal JO40_11810 05e1c24986529baa6979586e0f8f639f 480 Gene3D G3DSA:1.20.200.10 120 389 4.6E-74 T 14-10-2018 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 SMART SM00998 387 473 3.0E-7 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 PRINTS PR00145 Argininosuccinate lyase family signature 251 275 4.1E-9 T 14-10-2018 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 PRINTS PR00145 Argininosuccinate lyase family signature 296 312 4.1E-9 T 14-10-2018 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 PRINTS PR00145 Argininosuccinate lyase family signature 116 138 4.1E-9 T 14-10-2018 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 PRINTS PR00145 Argininosuccinate lyase family signature 158 178 4.1E-9 T 14-10-2018 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 ProSitePatterns PS00163 Fumarate lyases signature. 296 305 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 SUPERFAMILY SSF48557 15 442 1.24E-74 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JO40_11810 05e1c24986529baa6979586e0f8f639f 480 PRINTS PR00149 Fumarate lyase superfamily signature 296 312 1.1E-16 T 14-10-2018 IPR000362 Fumarate lyase family JO40_11810 05e1c24986529baa6979586e0f8f639f 480 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.1E-16 T 14-10-2018 IPR000362 Fumarate lyase family JO40_11810 05e1c24986529baa6979586e0f8f639f 480 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.1E-16 T 14-10-2018 IPR000362 Fumarate lyase family JO40_11810 05e1c24986529baa6979586e0f8f639f 480 Gene3D G3DSA:1.10.275.10 8 119 7.2E-7 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JO40_02155 47e3ad57b550cc22af9de2193f10d6fc 259 SUPERFAMILY SSF51695 11 256 3.4E-57 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JO40_02155 47e3ad57b550cc22af9de2193f10d6fc 259 Gene3D G3DSA:3.20.20.190 3 258 8.4E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JO40_02155 47e3ad57b550cc22af9de2193f10d6fc 259 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 17 188 5.8E-28 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 SMART SM00283 413 660 1.3E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 479 627 2.7E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 Pfam PF02743 Cache domain 44 278 5.6E-30 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 SUPERFAMILY SSF103190 72 192 7.85E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 4.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 4.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 4.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 588 617 4.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 SMART SM00304 316 370 5.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 Gene3D G3DSA:3.30.450.20 155 297 4.2E-23 T 14-10-2018 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 SUPERFAMILY SSF58104 338 440 1.07E-8 T 14-10-2018 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 SUPERFAMILY SSF58104 424 656 6.02E-46 T 14-10-2018 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 Gene3D G3DSA:1.10.287.950 316 434 1.3E-10 T 14-10-2018 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 Gene3D G3DSA:1.10.287.950 438 658 1.5E-42 T 14-10-2018 JO40_02670 bd70afdb5fb158b2513962ce14ab34db 703 Pfam PF00672 HAMP domain 317 362 1.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_01945 6992af482375d037c14b3c77c80fc16b 219 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 5 188 3.3E-64 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 JO40_01945 6992af482375d037c14b3c77c80fc16b 219 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 185 3.2E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JO40_01945 6992af482375d037c14b3c77c80fc16b 219 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 195 24.537 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 JO40_01945 6992af482375d037c14b3c77c80fc16b 219 PIRSF PIRSF006102 1 204 1.8E-76 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JO40_01140 e779516ff0b68dce5b6887e3bed7008a 703 SUPERFAMILY SSF56719 4 457 8.63E-109 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO40_01140 e779516ff0b68dce5b6887e3bed7008a 703 SMART SM00434 4 434 1.2E-101 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_01140 e779516ff0b68dce5b6887e3bed7008a 703 Gene3D G3DSA:1.10.268.10 332 428 3.6E-104 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO40_01140 e779516ff0b68dce5b6887e3bed7008a 703 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 23 437 1.4E-113 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_01140 e779516ff0b68dce5b6887e3bed7008a 703 Gene3D G3DSA:3.90.199.10 23 433 3.6E-104 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JO40_01140 e779516ff0b68dce5b6887e3bed7008a 703 Gene3D G3DSA:3.30.1360.40 205 295 3.6E-104 T 14-10-2018 JO40_02365 1207a0feee8118fe969aee068aad1a71 483 Gene3D G3DSA:3.60.60.10 13 226 1.9E-7 T 14-10-2018 JO40_02365 1207a0feee8118fe969aee068aad1a71 483 Pfam PF03577 Peptidase family C69 13 413 1.3E-155 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 JO40_03725 6af37d2017e044f182d9cd8f3c3e5c0c 382 Pfam PF13784 Fic/DOC family N-terminal 39 115 2.6E-22 T 14-10-2018 IPR025758 Fic/DOC N-terminal JO40_03725 6af37d2017e044f182d9cd8f3c3e5c0c 382 SUPERFAMILY SSF140931 99 292 2.22E-43 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_03725 6af37d2017e044f182d9cd8f3c3e5c0c 382 Gene3D G3DSA:1.10.3290.10 59 300 1.3E-51 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_03725 6af37d2017e044f182d9cd8f3c3e5c0c 382 Pfam PF02661 Fic/DOC family 122 227 2.3E-21 T 14-10-2018 IPR003812 Fido domain JO40_03725 6af37d2017e044f182d9cd8f3c3e5c0c 382 PIRSF PIRSF038925 10 377 7.1E-118 T 14-10-2018 IPR026287 Adenosine monophosphate-protein transferase JO40_02390 13a52e9a2d6b15feb62ffc6eaf2bc609 212 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 212 25.036 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 JO40_02390 13a52e9a2d6b15feb62ffc6eaf2bc609 212 SUPERFAMILY SSF52540 1 211 2.06E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02390 13a52e9a2d6b15feb62ffc6eaf2bc609 212 Gene3D G3DSA:3.40.50.300 1 212 3.1E-42 T 14-10-2018 JO40_02390 13a52e9a2d6b15feb62ffc6eaf2bc609 212 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 6 208 3.9E-49 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 JO40_02390 13a52e9a2d6b15feb62ffc6eaf2bc609 212 Pfam PF01926 50S ribosome-binding GTPase 26 146 1.5E-15 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_02555 c556203074fbb8665811bee9c72722e5 332 SMART SM00382 33 234 8.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02555 c556203074fbb8665811bee9c72722e5 332 Gene3D G3DSA:3.40.50.300 2 332 6.2E-91 T 14-10-2018 JO40_02555 c556203074fbb8665811bee9c72722e5 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 321 9.0E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_02555 c556203074fbb8665811bee9c72722e5 332 SUPERFAMILY SSF52540 35 321 1.81E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02555 c556203074fbb8665811bee9c72722e5 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 2.1E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_02555 c556203074fbb8665811bee9c72722e5 332 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_02555 c556203074fbb8665811bee9c72722e5 332 Pfam PF00005 ABC transporter 25 184 6.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_07785 eef86b79afb8508a11a054016e97bb2c 125 SUPERFAMILY SSF55298 1 124 1.04E-46 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO40_07785 eef86b79afb8508a11a054016e97bb2c 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 JO40_07785 eef86b79afb8508a11a054016e97bb2c 125 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.6E-43 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JO40_07785 eef86b79afb8508a11a054016e97bb2c 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 2.2E-51 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 JO40_07785 eef86b79afb8508a11a054016e97bb2c 125 Gene3D G3DSA:3.30.1330.40 1 125 6.7E-52 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO40_04810 ee80f4fa053ed071dcb61c99dc614d37 230 Gene3D G3DSA:3.30.70.1450 140 229 4.7E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_04810 ee80f4fa053ed071dcb61c99dc614d37 230 SUPERFAMILY SSF51735 5 137 1.01E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_04810 ee80f4fa053ed071dcb61c99dc614d37 230 Gene3D G3DSA:3.40.50.720 2 139 5.0E-26 T 14-10-2018 JO40_04810 ee80f4fa053ed071dcb61c99dc614d37 230 Pfam PF02254 TrkA-N domain 7 121 2.9E-20 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO40_04810 ee80f4fa053ed071dcb61c99dc614d37 230 SUPERFAMILY SSF116726 132 229 1.19E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_04645 6ef05d7fea76e80265e7bf1296c4e841 295 SUPERFAMILY SSF103481 41 141 7.19E-12 T 14-10-2018 JO40_04645 6ef05d7fea76e80265e7bf1296c4e841 295 SUPERFAMILY SSF103481 186 284 2.48E-16 T 14-10-2018 JO40_04645 6ef05d7fea76e80265e7bf1296c4e841 295 Pfam PF00892 EamA-like transporter family 153 281 1.8E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_04645 6ef05d7fea76e80265e7bf1296c4e841 295 Pfam PF00892 EamA-like transporter family 8 139 3.2E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_00650 8308af353afc03ea5d87a5a4269bcae7 615 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 203 609 1.8E-73 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JO40_00650 8308af353afc03ea5d87a5a4269bcae7 615 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 212 612 9.6E-109 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Gene3D G3DSA:1.10.10.650 13 122 1.1E-30 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Gene3D G3DSA:1.10.150.310 500 624 8.6E-42 T 14-10-2018 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 SUPERFAMILY SSF158832 16 325 1.14E-90 T 14-10-2018 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 SMART SM00316 643 714 9.0E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 SMART SM00732 331 425 5.0E-26 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 SUPERFAMILY SSF53098 327 469 8.34E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 SUPERFAMILY SSF50249 629 715 4.7E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Gene3D G3DSA:2.40.50.140 629 717 1.6E-26 T 14-10-2018 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 SUPERFAMILY SSF47781 471 559 8.23E-26 T 14-10-2018 IPR010994 RuvA domain 2-like JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Pfam PF12836 Helix-hairpin-helix motif 492 555 6.3E-27 T 14-10-2018 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Pfam PF00575 S1 RNA binding domain 642 714 1.3E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Pfam PF09371 Tex-like protein N-terminal domain 22 209 3.9E-57 T 14-10-2018 IPR018974 Tex-like protein, N-terminal JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Pfam PF16921 Tex protein YqgF-like domain 332 452 5.0E-42 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Gene3D G3DSA:1.10.3500.10 125 499 6.5E-130 T 14-10-2018 IPR023323 Tex-like domain superfamily JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 SUPERFAMILY SSF47781 561 626 2.45E-12 T 14-10-2018 IPR010994 RuvA domain 2-like JO40_00680 c4672299dfd7a2ca9be3498c84d200d7 817 Gene3D G3DSA:3.30.420.140 330 452 6.5E-130 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 JO40_05050 be66ea79502959391714321e63d331e9 156 Gene3D G3DSA:3.90.320.10 1 129 3.1E-10 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal JO40_05050 be66ea79502959391714321e63d331e9 156 Pfam PF12705 PD-(D/E)XK nuclease superfamily 15 125 8.6E-6 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JO40_05050 be66ea79502959391714321e63d331e9 156 SUPERFAMILY SSF52980 5 125 1.18E-14 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO40_11775 dabf687813153efe61df19a8c5506f84 67 Gene3D G3DSA:2.30.170.50 1 67 2.4E-34 T 14-10-2018 JO40_11775 dabf687813153efe61df19a8c5506f84 67 Pfam PF01197 Ribosomal protein L31 1 64 6.8E-34 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_11775 dabf687813153efe61df19a8c5506f84 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_11775 dabf687813153efe61df19a8c5506f84 67 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.4E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_11775 dabf687813153efe61df19a8c5506f84 67 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.4E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_11775 dabf687813153efe61df19a8c5506f84 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_11775 dabf687813153efe61df19a8c5506f84 67 SUPERFAMILY SSF143800 1 65 1.96E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_11775 dabf687813153efe61df19a8c5506f84 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 2.3E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_11775 dabf687813153efe61df19a8c5506f84 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 31.412 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 114 30.497 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.3E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.3E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.3E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 PIRSF PIRSF002191 1 119 9.2E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 Gene3D G3DSA:2.30.30.790 7 118 2.4E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 Pfam PF01245 Ribosomal protein L19 4 112 6.6E-47 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 112 3.4E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06785 50329fad8e0e96df0219be986b2b486b 119 SUPERFAMILY SSF50104 2 115 1.6E-44 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 SUPERFAMILY SSF52490 21 217 1.07E-67 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 18 350 35.748 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 PRINTS PR00423 Cell division protein FtsZ signature 198 220 8.1E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 PRINTS PR00423 Cell division protein FtsZ signature 135 156 8.1E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 PRINTS PR00423 Cell division protein FtsZ signature 107 127 8.1E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 PRINTS PR00423 Cell division protein FtsZ signature 221 242 8.1E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 23 182 4.8E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 ProSitePatterns PS01135 FtsZ protein signature 2. 106 127 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 Gene3D G3DSA:3.30.1330.20 230 341 3.9E-37 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 SMART SM00865 216 334 5.9E-44 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 14 343 4.6E-125 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 ProSitePatterns PS01134 FtsZ protein signature 1. 53 87 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 SUPERFAMILY SSF55307 214 329 1.53E-38 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 SMART SM00864 22 214 3.8E-110 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 Gene3D G3DSA:3.40.50.1440 17 229 5.1E-78 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JO40_13360 e134e64b6b73d26505cab1fa7ef8d3f4 427 Pfam PF12327 FtsZ family, C-terminal domain 231 325 5.1E-28 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal JO40_06495 6aa5896a91d2a849e57adf9d322ae3e4 271 Pfam PF02565 Recombination protein O C terminal 133 264 4.8E-10 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JO40_06495 6aa5896a91d2a849e57adf9d322ae3e4 271 SUPERFAMILY SSF57863 87 255 6.54E-19 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger JO40_13175 adc57a268e03a6be4556e8815bfb5f31 345 Gene3D G3DSA:2.40.30.40 76 170 7.2E-119 T 14-10-2018 IPR023367 Peptidase M42, domain 2 JO40_13175 adc57a268e03a6be4556e8815bfb5f31 345 SUPERFAMILY SSF53187 3 341 1.35E-45 T 14-10-2018 JO40_13175 adc57a268e03a6be4556e8815bfb5f31 345 Pfam PF05343 M42 glutamyl aminopeptidase 55 334 2.5E-67 T 14-10-2018 IPR008007 Peptidase M42 JO40_13175 adc57a268e03a6be4556e8815bfb5f31 345 Gene3D G3DSA:3.40.630.10 7 341 7.2E-119 T 14-10-2018 JO40_13175 adc57a268e03a6be4556e8815bfb5f31 345 PIRSF PIRSF001123 1 344 2.1E-30 T 14-10-2018 IPR008007 Peptidase M42 JO40_13175 adc57a268e03a6be4556e8815bfb5f31 345 SUPERFAMILY SSF101821 73 185 1.83E-23 T 14-10-2018 JO40_05680 48f6f2500d8b9e7dc5f26211ab4e75ae 205 Gene3D G3DSA:1.25.40.290 88 205 7.6E-48 T 14-10-2018 JO40_05680 48f6f2500d8b9e7dc5f26211ab4e75ae 205 Pfam PF08713 DNA alkylation repair enzyme 27 181 1.1E-12 T 14-10-2018 IPR014825 DNA alkylation repair enzyme JO40_05680 48f6f2500d8b9e7dc5f26211ab4e75ae 205 SUPERFAMILY SSF48371 24 190 1.79E-34 T 14-10-2018 IPR016024 Armadillo-type fold JO40_05680 48f6f2500d8b9e7dc5f26211ab4e75ae 205 Gene3D G3DSA:1.10.1240.70 1 87 1.9E-40 T 14-10-2018 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 133 7.7E-21 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 461 476 8.1E-17 T 14-10-2018 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 478 493 8.1E-17 T 14-10-2018 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 307 326 8.1E-17 T 14-10-2018 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 Gene3D G3DSA:3.50.30.10 6 242 3.9E-57 T 14-10-2018 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 Gene3D G3DSA:3.20.20.60 243 590 2.0E-106 T 14-10-2018 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 581 8.4E-153 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 Pfam PF00391 PEP-utilising enzyme, mobile domain 160 234 6.3E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 SUPERFAMILY SSF51621 271 566 8.64E-91 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 Gene3D G3DSA:1.10.274.10 24 155 3.9E-57 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 PIRSF PIRSF000732 1 592 3.8E-203 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 SUPERFAMILY SSF47831 27 149 4.32E-20 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 461 479 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 SUPERFAMILY SSF52009 133 254 1.01E-24 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO40_06260 9b9b457565740ed63c14e8909e487fac 594 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 266 559 8.3E-98 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 Gene3D G3DSA:3.30.980.10 462 596 3.3E-52 T 14-10-2018 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 600 97.608 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 SMART SM00863 552 595 8.4E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 552 594 9.8E-15 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 Gene3D G3DSA:3.30.930.10 4 246 7.8E-101 T 14-10-2018 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 Pfam PF01411 tRNA synthetases class II (A) 9 458 1.8E-143 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 SUPERFAMILY SSF101353 252 449 1.7E-61 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 SUPERFAMILY SSF55681 6 250 1.82E-79 T 14-10-2018 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 446 1.8E-142 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 SUPERFAMILY SSF55186 459 598 7.46E-48 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 Gene3D G3DSA:3.30.54.20 523 576 3.3E-52 T 14-10-2018 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 231 244 1.7E-25 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.7E-25 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 1.7E-25 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 204 215 1.7E-25 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JO40_10885 3ebd67d8b0671620432f87d46c4b0bcf 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.7E-25 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JO40_13070 29d98ba84d0c9e07a63d3c5087414197 85 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 84 9.3E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO40_13070 29d98ba84d0c9e07a63d3c5087414197 85 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 84 3.3E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO40_13070 29d98ba84d0c9e07a63d3c5087414197 85 SUPERFAMILY SSF143011 1 82 1.7E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_13070 29d98ba84d0c9e07a63d3c5087414197 85 Gene3D G3DSA:3.30.2310.20 1 85 2.8E-29 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 Pfam PF01479 S4 domain 5 45 4.1E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 SUPERFAMILY SSF55120 62 240 3.84E-34 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 Gene3D G3DSA:3.30.70.580 65 240 6.4E-49 T 14-10-2018 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 Gene3D G3DSA:3.30.70.1560 132 222 6.4E-49 T 14-10-2018 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 236 2.1E-39 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 Gene3D G3DSA:3.10.290.10 2 59 1.6E-11 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 SMART SM00363 4 64 8.0E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 SUPERFAMILY SSF55174 4 89 2.65E-12 T 14-10-2018 JO40_02060 0afc0d486428e79f5b193cafbbacb937 246 Pfam PF00849 RNA pseudouridylate synthase 65 204 1.6E-13 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_01580 193073643a925fa4e2ac7ddffc9d0683 89 Gene3D G3DSA:1.10.287.10 1 89 6.6E-32 T 14-10-2018 JO40_01580 193073643a925fa4e2ac7ddffc9d0683 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-40 T 14-10-2018 JO40_01580 193073643a925fa4e2ac7ddffc9d0683 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.5E-36 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01580 193073643a925fa4e2ac7ddffc9d0683 89 Pfam PF00312 Ribosomal protein S15 8 88 4.2E-33 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_01580 193073643a925fa4e2ac7ddffc9d0683 89 SMART SM01387 8 88 3.7E-43 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_01580 193073643a925fa4e2ac7ddffc9d0683 89 SUPERFAMILY SSF47060 3 89 9.71E-31 T 14-10-2018 IPR009068 S15/NS1, RNA-binding JO40_01580 193073643a925fa4e2ac7ddffc9d0683 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.809 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 Pfam PF04055 Radical SAM superfamily 166 353 4.2E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 483 52.89 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 166 186 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 Gene3D G3DSA:2.40.50.140 410 484 1.3E-8 T 14-10-2018 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 SUPERFAMILY SSF102114 158 399 4.45E-47 T 14-10-2018 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 Pfam PF00919 Uncharacterized protein family UPF0004 5 101 7.9E-25 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 478 1.6E-100 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 Gene3D G3DSA:3.40.50.12160 5 129 3.8E-31 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 SMART SM00729 162 395 7.7E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 Gene3D G3DSA:3.80.30.20 161 409 2.1E-72 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO40_07255 1511d54d64565fd8ba0f158d1c678b58 484 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 479 3.3E-107 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 614 643 1.1E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 508 537 1.1E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 585 612 1.1E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 Gene3D G3DSA:1.10.287.950 442 762 1.2E-45 T 14-10-2018 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 554 692 1.3E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 SMART SM00283 487 748 3.9E-21 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 SUPERFAMILY SSF58104 507 749 2.09E-42 T 14-10-2018 JO40_02370 72a91daf5c4f989fa9d2c17dde9acd95 778 Pfam PF07695 7TM diverse intracellular signalling 218 416 1.1E-24 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 Gene3D G3DSA:1.10.10.160 108 179 2.2E-89 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 Pfam PF00580 UvrD/REP helicase N-terminal domain 154 260 7.0E-38 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 123 2.3E-36 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 SUPERFAMILY SSF52540 2 636 1.59E-164 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 Gene3D G3DSA:1.10.486.10 371 540 3.8E-116 T 14-10-2018 JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 Pfam PF13361 UvrD-like helicase C-terminal domain 265 610 9.9E-72 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 Gene3D G3DSA:3.40.50.300 8 261 2.2E-89 T 14-10-2018 JO40_01495 786262e0d3c132dd6a149bc22bd0751b 664 Gene3D G3DSA:3.40.50.300 268 627 3.8E-116 T 14-10-2018 JO40_12000 43d525199e4b98c717fe786a720fab1b 490 PIRSF PIRSF016636 1 490 2.0E-143 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB JO40_12000 43d525199e4b98c717fe786a720fab1b 490 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 91 360 1.8E-22 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT JO40_12000 43d525199e4b98c717fe786a720fab1b 490 PIRSF PIRSF500217 1 490 5.1E-142 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Gene3D G3DSA:3.40.50.920 261 423 2.6E-61 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 SMART SM00890 630 687 3.1E-28 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 SUPERFAMILY SSF53323 424 676 3.92E-83 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 249 2.4E-79 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 SUPERFAMILY SSF52518 5 260 1.47E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 SUPERFAMILY SSF52518 807 1184 5.05E-127 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Gene3D G3DSA:3.40.50.970 805 1184 8.0E-160 T 14-10-2018 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Gene3D G3DSA:3.40.920.10 425 632 2.6E-85 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 434 617 1.7E-28 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Pfam PF10371 Domain of unknown function 634 686 2.8E-21 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 971 1083 1.2E-10 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Pfam PF12838 4Fe-4S dicluster domain 697 765 1.4E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 PIRSF PIRSF000159 2 1186 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 SUPERFAMILY SSF52922 261 422 8.17E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 697 708 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 753 764 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Gene3D G3DSA:3.40.50.970 4 260 1.5E-105 T 14-10-2018 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 SUPERFAMILY SSF54862 673 846 1.17E-22 T 14-10-2018 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Gene3D G3DSA:3.30.70.20 677 800 4.3E-38 T 14-10-2018 JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 355 2.9E-14 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II JO40_01255 192c6f9f146b02295f27826d05d1de23 1186 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 7 1183 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 JO40_10680 33aaa59d0e487852499fd046b1347b0f 187 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 132 1.7E-29 T 14-10-2018 IPR008136 CinA, C-terminal JO40_10680 33aaa59d0e487852499fd046b1347b0f 187 Pfam PF02464 Competence-damaged protein 6 177 9.9E-34 T 14-10-2018 IPR008136 CinA, C-terminal JO40_10680 33aaa59d0e487852499fd046b1347b0f 187 SUPERFAMILY SSF142433 5 181 6.28E-36 T 14-10-2018 IPR036653 CinA-like, C-terminal JO40_10680 33aaa59d0e487852499fd046b1347b0f 187 Gene3D G3DSA:3.90.950.20 3 182 2.2E-40 T 14-10-2018 IPR036653 CinA-like, C-terminal JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Gene3D G3DSA:3.30.70.870 289 370 2.2E-34 T 14-10-2018 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 SUPERFAMILY SSF50447 168 291 1.85E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 SUPERFAMILY SSF54980 295 373 3.13E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 SUPERFAMILY SSF52540 1 202 4.32E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 277.271 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Gene3D G3DSA:3.40.50.300 2 188 6.2E-72 T 14-10-2018 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 179 1.3E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Pfam PF14492 Elongation Factor G, domain II 295 367 6.0E-7 T 14-10-2018 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Gene3D G3DSA:2.40.30.10 189 288 1.3E-32 T 14-10-2018 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Pfam PF03144 Elongation factor Tu domain 2 208 278 3.5E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Pfam PF00679 Elongation factor G C-terminus 403 488 1.3E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Pfam PF00009 Elongation factor Tu GTP binding domain 5 184 1.2E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 2.9E-303 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Gene3D G3DSA:3.30.70.3380 371 482 3.4E-42 T 14-10-2018 JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Pfam PF06421 GTP-binding protein LepA C-terminus 491 597 3.2E-47 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 SUPERFAMILY SSF54980 404 497 6.23E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_10360 94c8ee592a288f157bbf21a6913f7393 601 Gene3D G3DSA:3.30.70.2570 483 557 6.2E-31 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 SUPERFAMILY SSF53738 213 316 5.77E-19 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Gene3D G3DSA:3.30.310.50 473 575 1.8E-7 T 14-10-2018 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 330 456 2.7E-17 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 214 317 1.9E-28 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 146 160 1.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 301 316 1.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 254 1.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Gene3D G3DSA:3.40.120.10 213 329 1.4E-25 T 14-10-2018 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 46 186 8.8E-40 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Gene3D G3DSA:3.40.120.10 38 197 7.2E-47 T 14-10-2018 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 SUPERFAMILY SSF53738 309 458 3.06E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 SUPERFAMILY SSF53738 33 242 1.38E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Gene3D G3DSA:3.40.120.10 330 457 5.5E-31 T 14-10-2018 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 554 5.1E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 147 156 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_12320 7c4a7f5d51a9957ca3876b89a47e9506 587 SUPERFAMILY SSF55957 449 553 7.85E-12 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_00275 356054ff76290bfaf5c21e0735cb28c3 341 SUPERFAMILY SSF161098 116 325 6.76E-17 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00275 356054ff76290bfaf5c21e0735cb28c3 341 Gene3D G3DSA:1.10.3720.10 112 328 3.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00275 356054ff76290bfaf5c21e0735cb28c3 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 337 7.2E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_01045 6c6f92208649abc19162be9970c138a6 276 SUPERFAMILY SSF52540 28 257 1.42E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01045 6c6f92208649abc19162be9970c138a6 276 Hamap MF_02040 Iron-sulfur cluster carrier protein. 31 274 33.281 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein JO40_01045 6c6f92208649abc19162be9970c138a6 276 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 36 258 6.1E-85 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JO40_01045 6c6f92208649abc19162be9970c138a6 276 Gene3D G3DSA:3.40.50.300 28 269 1.5E-70 T 14-10-2018 JO40_06735 6a91962b804a6bf25b280a0c6b18f0c9 272 SUPERFAMILY SSF81345 2 254 5.89E-33 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_06735 6a91962b804a6bf25b280a0c6b18f0c9 272 Gene3D G3DSA:1.10.3470.10 34 267 1.6E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_06735 6a91962b804a6bf25b280a0c6b18f0c9 272 Pfam PF00950 ABC 3 transport family 3 256 2.8E-60 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 Pfam PF00248 Aldo/keto reductase family 21 257 3.1E-45 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 Gene3D G3DSA:3.20.20.100 1 282 1.9E-111 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 PRINTS PR00069 Aldo-keto reductase signature 119 136 1.6E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 PRINTS PR00069 Aldo-keto reductase signature 192 216 1.6E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 PRINTS PR00069 Aldo-keto reductase signature 90 108 1.6E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 PRINTS PR00069 Aldo-keto reductase signature 153 182 1.6E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 PRINTS PR00069 Aldo-keto reductase signature 34 58 1.6E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 PIRSF PIRSF000097 1 111 1.4E-34 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 PIRSF PIRSF000097 109 276 9.9E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JO40_07140 68129ea5975cd2cef1f72d3331ae817d 285 SUPERFAMILY SSF51430 4 259 8.12E-85 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 136 219 6.0E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 SUPERFAMILY SSF51735 2 140 1.65E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 Gene3D G3DSA:1.10.1740.10 292 375 3.3E-22 T 14-10-2018 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 372 40.137 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 373 7.7E-107 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 Gene3D G3DSA:3.40.50.720 1 140 4.5E-34 T 14-10-2018 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 PIRSF PIRSF006205 3 377 5.4E-125 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 Pfam PF13288 DXP reductoisomerase C-terminal domain 252 367 3.6E-31 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 122 2.1E-25 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 SUPERFAMILY SSF55347 116 254 4.25E-53 T 14-10-2018 JO40_00055 9eedcc2d5972a3cd18334d71e263106e 381 SUPERFAMILY SSF69055 284 373 2.62E-24 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 309 32.779 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 SMART SM00937 29 138 2.3E-47 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 Pfam PF00472 RF-1 domain 172 281 1.3E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 Gene3D G3DSA:3.30.70.1660 74 302 3.4E-95 T 14-10-2018 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 188 204 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 308 4.4E-144 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 SUPERFAMILY SSF75620 3 308 2.62E-121 T 14-10-2018 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 Pfam PF03462 PCRF domain 3 163 2.0E-50 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 Gene3D G3DSA:1.20.58.410 1 59 2.2E-6 T 14-10-2018 JO40_12855 c82cf7384637773e99fcbc728eb99306 320 Gene3D G3DSA:3.30.160.20 169 264 3.4E-95 T 14-10-2018 JO40_06215 bfc6a06a0c856c0feb6bf4726893027e 494 Gene3D G3DSA:3.40.309.10 262 456 3.1E-160 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JO40_06215 bfc6a06a0c856c0feb6bf4726893027e 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JO40_06215 bfc6a06a0c856c0feb6bf4726893027e 494 Pfam PF00171 Aldehyde dehydrogenase family 21 478 8.5E-161 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JO40_06215 bfc6a06a0c856c0feb6bf4726893027e 494 SUPERFAMILY SSF53720 6 485 9.82E-150 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JO40_06215 bfc6a06a0c856c0feb6bf4726893027e 494 Gene3D G3DSA:3.40.605.10 16 473 3.1E-160 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JO40_05460 d36f22b02501e4c15b1d1c4710715529 612 SUPERFAMILY SSF52540 354 598 1.18E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05460 d36f22b02501e4c15b1d1c4710715529 612 Pfam PF00005 ABC transporter 375 527 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05460 d36f22b02501e4c15b1d1c4710715529 612 Gene3D G3DSA:1.20.1560.10 136 355 7.0E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05460 d36f22b02501e4c15b1d1c4710715529 612 SMART SM00382 384 572 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05460 d36f22b02501e4c15b1d1c4710715529 612 Gene3D G3DSA:3.40.50.300 356 603 7.0E-74 T 14-10-2018 JO40_05460 d36f22b02501e4c15b1d1c4710715529 612 SUPERFAMILY SSF90123 13 321 1.1E-9 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05460 d36f22b02501e4c15b1d1c4710715529 612 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 Pfam PF00005 ABC transporter 18 169 9.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 SUPERFAMILY SSF52540 2 233 2.89E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 Pfam PF00005 ABC transporter 279 418 1.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 SMART SM00382 288 465 1.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 SMART SM00382 27 217 0.0016 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 Gene3D G3DSA:3.40.50.300 261 490 4.0E-53 T 14-10-2018 JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 Gene3D G3DSA:3.40.50.300 1 253 3.8E-58 T 14-10-2018 JO40_03740 1334f07afc52bb5fc6b473c83264f68f 491 SUPERFAMILY SSF52540 254 472 7.1E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05245 48a85237fe66d58da5febfdb73f931cf 82 SMART SM00966 4 49 1.1E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_05245 48a85237fe66d58da5febfdb73f931cf 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 39 3.3E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_05245 48a85237fe66d58da5febfdb73f931cf 82 SUPERFAMILY SSF89447 1 46 1.38E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO40_05245 48a85237fe66d58da5febfdb73f931cf 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 41 3.8E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_05245 48a85237fe66d58da5febfdb73f931cf 82 Gene3D G3DSA:2.10.260.10 1 42 5.4E-13 T 14-10-2018 JO40_07675 7b592644eb86abc3083b6e10debae380 279 SUPERFAMILY SSF53850 12 273 9.66E-48 T 14-10-2018 JO40_07675 7b592644eb86abc3083b6e10debae380 279 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 73 86 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site JO40_07675 7b592644eb86abc3083b6e10debae380 279 SMART SM00062 49 273 5.2E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO40_07675 7b592644eb86abc3083b6e10debae380 279 Gene3D G3DSA:3.40.190.10 51 271 8.7E-51 T 14-10-2018 JO40_07675 7b592644eb86abc3083b6e10debae380 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 271 1.3E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO40_07675 7b592644eb86abc3083b6e10debae380 279 Gene3D G3DSA:3.40.190.10 136 229 8.7E-51 T 14-10-2018 JO40_06590 6a7b9f161ee13265da320574f653f16f 452 Pfam PF00571 CBS domain 133 191 1.2E-4 T 14-10-2018 IPR000644 CBS domain JO40_06590 6a7b9f161ee13265da320574f653f16f 452 Pfam PF00571 CBS domain 198 250 1.2E-9 T 14-10-2018 IPR000644 CBS domain JO40_06590 6a7b9f161ee13265da320574f653f16f 452 Gene3D G3DSA:3.10.580.10 130 257 1.7E-44 T 14-10-2018 JO40_06590 6a7b9f161ee13265da320574f653f16f 452 SMART SM00116 204 252 2.4E-7 T 14-10-2018 IPR000644 CBS domain JO40_06590 6a7b9f161ee13265da320574f653f16f 452 SUPERFAMILY SSF158791 5 129 3.53E-27 T 14-10-2018 JO40_06590 6a7b9f161ee13265da320574f653f16f 452 Pfam PF03448 MgtE intracellular N domain 31 131 3.0E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JO40_06590 6a7b9f161ee13265da320574f653f16f 452 Pfam PF01769 Divalent cation transporter 319 441 8.6E-31 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 JO40_06590 6a7b9f161ee13265da320574f653f16f 452 Gene3D G3DSA:1.25.60.10 2 128 3.0E-24 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily JO40_06590 6a7b9f161ee13265da320574f653f16f 452 SUPERFAMILY SSF54631 133 272 2.15E-33 T 14-10-2018 JO40_06590 6a7b9f161ee13265da320574f653f16f 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 10 447 3.5E-153 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 JO40_06590 6a7b9f161ee13265da320574f653f16f 452 SUPERFAMILY SSF161093 276 447 9.94E-50 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 JO40_06590 6a7b9f161ee13265da320574f653f16f 452 Gene3D G3DSA:1.10.357.20 270 448 1.2E-60 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain JO40_06590 6a7b9f161ee13265da320574f653f16f 452 SMART SM00924 30 133 6.1E-30 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JO40_01455 124ff3755d0e18a161a12339f539765a 309 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 1.1E-59 T 14-10-2018 JO40_01455 124ff3755d0e18a161a12339f539765a 309 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 1.1E-59 T 14-10-2018 JO40_01455 124ff3755d0e18a161a12339f539765a 309 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 1.1E-59 T 14-10-2018 JO40_01455 124ff3755d0e18a161a12339f539765a 309 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 1.1E-59 T 14-10-2018 JO40_01455 124ff3755d0e18a161a12339f539765a 309 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 1.1E-59 T 14-10-2018 JO40_01455 124ff3755d0e18a161a12339f539765a 309 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 1.1E-59 T 14-10-2018 JO40_01455 124ff3755d0e18a161a12339f539765a 309 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 1.1E-59 T 14-10-2018 JO40_01455 124ff3755d0e18a161a12339f539765a 309 TIGRFAM TIGR00746 arcC: carbamate kinase 3 308 2.2E-115 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JO40_01455 124ff3755d0e18a161a12339f539765a 309 Pfam PF00696 Amino acid kinase family 3 284 1.0E-35 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JO40_01455 124ff3755d0e18a161a12339f539765a 309 SUPERFAMILY SSF53633 3 308 2.62E-84 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO40_01455 124ff3755d0e18a161a12339f539765a 309 PIRSF PIRSF000723 1 309 6.2E-120 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JO40_01455 124ff3755d0e18a161a12339f539765a 309 Gene3D G3DSA:3.40.1160.10 1 309 1.2E-117 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 SMART SM00460 418 480 6.0E-9 T 14-10-2018 IPR002931 Transglutaminase-like JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 Gene3D G3DSA:3.10.620.30 321 490 4.7E-24 T 14-10-2018 JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 Pfam PF01833 IPT/TIG domain 42 115 6.2E-6 T 14-10-2018 IPR002909 IPT domain JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 Gene3D G3DSA:2.60.40.10 138 242 4.3E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 SUPERFAMILY SSF54001 290 481 1.68E-28 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 SUPERFAMILY SSF81296 41 115 2.67E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 Gene3D G3DSA:2.60.40.10 40 120 1.7E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_04995 2aa0097583d9359e7cf4a3faba091f08 559 Pfam PF01841 Transglutaminase-like superfamily 374 478 2.2E-23 T 14-10-2018 IPR002931 Transglutaminase-like JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 Pfam PF00871 Acetokinase family 2 390 1.2E-167 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 Gene3D G3DSA:3.30.420.40 198 397 1.2E-88 T 14-10-2018 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 197.772 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 TIGRFAM TIGR00016 ackA: acetate kinase 1 396 6.8E-169 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 PIRSF PIRSF000722 1 397 6.8E-164 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 Gene3D G3DSA:3.30.420.40 1 196 4.1E-80 T 14-10-2018 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 SUPERFAMILY SSF53067 1 196 1.23E-72 T 14-10-2018 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 SUPERFAMILY SSF53067 159 396 5.05E-94 T 14-10-2018 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 PRINTS PR00471 Acetate kinase family signature 204 225 1.2E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 PRINTS PR00471 Acetate kinase family signature 3 14 1.2E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 PRINTS PR00471 Acetate kinase family signature 323 339 1.2E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 PRINTS PR00471 Acetate kinase family signature 377 389 1.2E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 PRINTS PR00471 Acetate kinase family signature 301 314 1.2E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_06940 5c8e0f5b7c95916159afbe2e2087f7d2 397 PRINTS PR00471 Acetate kinase family signature 174 187 1.2E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO40_02775 23f78a1264dee4918779f17e6250402e 439 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 2.9E-68 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JO40_02775 23f78a1264dee4918779f17e6250402e 439 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JO40_02775 23f78a1264dee4918779f17e6250402e 439 SUPERFAMILY SSF52440 1 113 6.47E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JO40_02775 23f78a1264dee4918779f17e6250402e 439 SUPERFAMILY SSF56059 115 324 3.03E-62 T 14-10-2018 JO40_02775 23f78a1264dee4918779f17e6250402e 439 Pfam PF02785 Biotin carboxylase C-terminal domain 341 431 5.3E-25 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO40_02775 23f78a1264dee4918779f17e6250402e 439 Gene3D G3DSA:3.30.470.130 1 436 4.8E-168 T 14-10-2018 JO40_02775 23f78a1264dee4918779f17e6250402e 439 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JO40_02775 23f78a1264dee4918779f17e6250402e 439 SMART SM00878 335 433 5.7E-35 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO40_02775 23f78a1264dee4918779f17e6250402e 439 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 2.4E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO40_02775 23f78a1264dee4918779f17e6250402e 439 SUPERFAMILY SSF51246 330 435 2.2E-29 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JO40_08400 2ed1762b1024d412289819941053dcc6 340 Pfam PF00849 RNA pseudouridylate synthase 96 276 5.2E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08400 2ed1762b1024d412289819941053dcc6 340 SUPERFAMILY SSF55120 82 334 2.67E-57 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08400 2ed1762b1024d412289819941053dcc6 340 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 334 3.1E-61 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08400 2ed1762b1024d412289819941053dcc6 340 Gene3D G3DSA:3.10.290.10 9 75 1.2E-5 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 623 3.0E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 Gene3D G3DSA:1.10.287.950 434 654 7.9E-42 T 14-10-2018 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 Gene3D G3DSA:3.30.450.20 149 294 8.8E-25 T 14-10-2018 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 SMART SM00304 312 366 3.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 SUPERFAMILY SSF58104 334 431 2.51E-7 T 14-10-2018 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 SUPERFAMILY SSF103190 90 176 1.41E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 Gene3D G3DSA:1.10.287.950 312 424 5.3E-9 T 14-10-2018 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 SUPERFAMILY SSF58104 414 657 5.36E-44 T 14-10-2018 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 SMART SM00283 409 656 3.0E-61 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_07535 c36eafefbe448314f73f3b04f9c6b3af 699 Pfam PF02743 Cache domain 46 274 2.7E-32 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 SMART SM00382 364 550 2.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 SUPERFAMILY SSF90123 13 329 1.83E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 Gene3D G3DSA:1.20.1560.10 1 328 1.8E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 Pfam PF00664 ABC transporter transmembrane region 27 297 1.7E-27 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 SUPERFAMILY SSF52540 335 573 1.52E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 Pfam PF00005 ABC transporter 355 504 3.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 Gene3D G3DSA:3.40.50.300 333 581 1.6E-87 T 14-10-2018 JO40_03215 031ece0dc3f7d5f7dfbdac43119e3986 581 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_11560 aa82c3a5a5ec86394828a1ed95a46c63 143 SUPERFAMILY SSF47188 4 133 2.88E-30 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO40_11560 aa82c3a5a5ec86394828a1ed95a46c63 143 Gene3D G3DSA:1.20.120.50 3 138 6.7E-34 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO40_11560 aa82c3a5a5ec86394828a1ed95a46c63 143 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 8 134 6.0E-36 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JO40_11560 aa82c3a5a5ec86394828a1ed95a46c63 143 Pfam PF01814 Hemerythrin HHE cation binding domain 17 128 3.0E-10 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JO40_11560 aa82c3a5a5ec86394828a1ed95a46c63 143 ProSitePatterns PS00550 Hemerythrin family signature. 63 86 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 JO40_04420 5ab4e61dda7a1b8bebb9a635c04579c1 539 Pfam PF09820 Predicted AAA-ATPase 10 295 2.4E-105 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_04420 5ab4e61dda7a1b8bebb9a635c04579c1 539 SUPERFAMILY SSF52540 35 210 2.3E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04420 5ab4e61dda7a1b8bebb9a635c04579c1 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 441 534 6.1E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_08310 929654561e91d2e7838f7ac46b99308d 300 SMART SM00248 142 171 3900.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_08310 929654561e91d2e7838f7ac46b99308d 300 SMART SM00248 175 204 13.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_08310 929654561e91d2e7838f7ac46b99308d 300 SMART SM00248 242 271 0.013 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_08310 929654561e91d2e7838f7ac46b99308d 300 SMART SM00248 209 238 0.1 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_08310 929654561e91d2e7838f7ac46b99308d 300 Gene3D G3DSA:1.25.40.20 116 300 3.9E-36 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_08310 929654561e91d2e7838f7ac46b99308d 300 Pfam PF00023 Ankyrin repeat 242 273 0.0036 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_08310 929654561e91d2e7838f7ac46b99308d 300 Pfam PF12796 Ankyrin repeats (3 copies) 150 239 2.1E-12 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_08310 929654561e91d2e7838f7ac46b99308d 300 SUPERFAMILY SSF48403 148 295 9.22E-35 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_07700 7299f68c792f09f0e224aa93d0d6a7d4 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.8E-35 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JO40_07700 7299f68c792f09f0e224aa93d0d6a7d4 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.9E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 JO40_07700 7299f68c792f09f0e224aa93d0d6a7d4 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.1 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JO40_07700 7299f68c792f09f0e224aa93d0d6a7d4 72 SUPERFAMILY SSF50249 2 70 1.26E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07700 7299f68c792f09f0e224aa93d0d6a7d4 72 SMART SM00316 4 72 7.4E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO40_07700 7299f68c792f09f0e224aa93d0d6a7d4 72 Gene3D G3DSA:2.40.50.140 2 70 1.4E-35 T 14-10-2018 JO40_09055 32879bc5f27e6842bd9b8f78eeaa5fec 328 Gene3D G3DSA:3.40.50.410 75 287 1.1E-35 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_09055 32879bc5f27e6842bd9b8f78eeaa5fec 328 Pfam PF00092 von Willebrand factor type A domain 84 240 1.6E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_09055 32879bc5f27e6842bd9b8f78eeaa5fec 328 SMART SM00327 81 261 1.5E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_09055 32879bc5f27e6842bd9b8f78eeaa5fec 328 SUPERFAMILY SSF53300 78 275 1.93E-19 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 Pfam PF00270 DEAD/DEAH box helicase 293 437 2.0E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 669 1.0E-229 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 Gene3D G3DSA:3.40.50.300 461 633 3.8E-55 T 14-10-2018 JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 SUPERFAMILY SSF50249 5 171 3.08E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 SMART SM00487 266 463 6.4E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 SMART SM00490 508 592 2.8E-21 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 Gene3D G3DSA:2.40.50.140 53 142 4.5E-7 T 14-10-2018 JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 SUPERFAMILY SSF52540 317 603 3.94E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 Pfam PF00271 Helicase conserved C-terminal domain 470 591 2.7E-18 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 Pfam PF17191 RecG wedge domain 13 166 1.6E-21 T 14-10-2018 IPR033454 RecG, wedge domain JO40_02340 9854fc73fefae9ee6f572e25e7285156 676 Gene3D G3DSA:3.40.50.300 252 460 1.5E-77 T 14-10-2018 JO40_00280 2acd9aa7e600c0478ab56ac034736de5 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 303 1.5E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_00280 2acd9aa7e600c0478ab56ac034736de5 338 Gene3D G3DSA:1.10.3720.10 85 301 7.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00280 2acd9aa7e600c0478ab56ac034736de5 338 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 73 3.5E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JO40_00280 2acd9aa7e600c0478ab56ac034736de5 338 SUPERFAMILY SSF161098 92 289 1.83E-23 T 14-10-2018 IPR035906 MetI-like superfamily JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 502 32.077 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 SUPERFAMILY SSF48163 314 502 4.45E-34 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 Gene3D G3DSA:1.10.10.350 402 505 7.4E-22 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.1E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 2.1E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 2.1E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.1E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.1E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 Gene3D G3DSA:3.40.50.620 1 329 8.3E-146 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 502 1.2E-167 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 SUPERFAMILY SSF52374 3 313 3.49E-111 T 14-10-2018 JO40_05335 faf0c2b9da7a297903ffcab2670c8721 506 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 320 7.5E-106 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 JO40_11530 a8d9dc1fd859420ae7af8bffc83f414f 330 Pfam PF03793 PASTA domain 115 184 2.4E-7 T 14-10-2018 IPR005543 PASTA domain JO40_11530 a8d9dc1fd859420ae7af8bffc83f414f 330 Pfam PF03793 PASTA domain 46 108 6.8E-11 T 14-10-2018 IPR005543 PASTA domain JO40_11530 a8d9dc1fd859420ae7af8bffc83f414f 330 Gene3D G3DSA:3.30.10.20 43 110 1.4E-11 T 14-10-2018 JO40_11530 a8d9dc1fd859420ae7af8bffc83f414f 330 Gene3D G3DSA:3.30.10.20 114 187 8.4E-7 T 14-10-2018 JO40_11530 a8d9dc1fd859420ae7af8bffc83f414f 330 SMART SM00740 110 184 0.75 T 14-10-2018 IPR005543 PASTA domain JO40_11530 a8d9dc1fd859420ae7af8bffc83f414f 330 SMART SM00740 42 109 1.4E-12 T 14-10-2018 IPR005543 PASTA domain JO40_11530 a8d9dc1fd859420ae7af8bffc83f414f 330 SMART SM00740 187 253 14.0 T 14-10-2018 IPR005543 PASTA domain JO40_07680 699234811b364d95297a4f2c08f9b96a 277 Gene3D G3DSA:3.40.190.10 133 227 3.2E-52 T 14-10-2018 JO40_07680 699234811b364d95297a4f2c08f9b96a 277 SMART SM00062 47 271 3.5E-47 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO40_07680 699234811b364d95297a4f2c08f9b96a 277 Gene3D G3DSA:3.40.190.10 48 269 3.2E-52 T 14-10-2018 JO40_07680 699234811b364d95297a4f2c08f9b96a 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 269 5.6E-52 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO40_07680 699234811b364d95297a4f2c08f9b96a 277 SUPERFAMILY SSF53850 10 271 1.01E-51 T 14-10-2018 JO40_07680 699234811b364d95297a4f2c08f9b96a 277 SMART SM00079 47 270 0.0064 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 JO40_07680 699234811b364d95297a4f2c08f9b96a 277 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 70 83 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 237 312 1.0E-19 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 703 725 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 Gene3D G3DSA:3.20.70.20 171 839 1.2E-200 T 14-10-2018 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 Pfam PF03477 ATP cone domain 1 92 1.7E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 241 833 7.7E-189 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 Pfam PF02867 Ribonucleotide reductase, barrel domain 317 829 6.8E-151 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 SUPERFAMILY SSF51998 316 844 6.41E-170 T 14-10-2018 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 SUPERFAMILY SSF48168 113 315 2.22E-54 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 530 541 1.7E-46 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 714 741 1.7E-46 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 653 676 1.7E-46 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 411 1.7E-46 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 647 1.7E-46 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04135 d0e6d92c9d59e815911f601d7092d7b4 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 587 610 1.7E-46 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_00520 ea4410e49cc9cffe867f1eb53a8a4cd7 147 Gene3D G3DSA:3.50.30.10 1 147 1.8E-31 T 14-10-2018 JO40_00520 ea4410e49cc9cffe867f1eb53a8a4cd7 147 PIRSF PIRSF004966 1 147 6.7E-46 T 14-10-2018 IPR012016 Aconitase X subunit 2, putative JO40_00520 ea4410e49cc9cffe867f1eb53a8a4cd7 147 Pfam PF01989 Protein of unknown function DUF126 47 116 1.2E-11 T 14-10-2018 IPR002840 Aconitase X swivel domain, putative JO40_00520 ea4410e49cc9cffe867f1eb53a8a4cd7 147 SUPERFAMILY SSF52016 3 144 6.83E-23 T 14-10-2018 JO40_10895 d612a0d04e42b837ad703bfef8098f94 139 Gene3D G3DSA:1.10.940.10 2 136 2.6E-38 T 14-10-2018 IPR035926 NusB-like superfamily JO40_10895 d612a0d04e42b837ad703bfef8098f94 139 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 3 139 19.799 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 JO40_10895 d612a0d04e42b837ad703bfef8098f94 139 Pfam PF01029 NusB family 8 136 1.2E-32 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JO40_10895 d612a0d04e42b837ad703bfef8098f94 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 138 1.7E-38 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 JO40_10895 d612a0d04e42b837ad703bfef8098f94 139 SUPERFAMILY SSF48013 5 135 6.15E-36 T 14-10-2018 IPR035926 NusB-like superfamily JO40_10605 cd90a9e77044274fc4e413a31ae1b8cc 302 SUPERFAMILY SSF102114 29 194 6.02E-14 T 14-10-2018 JO40_10605 cd90a9e77044274fc4e413a31ae1b8cc 302 SMART SM00729 25 242 0.0093 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_10605 cd90a9e77044274fc4e413a31ae1b8cc 302 Gene3D G3DSA:3.80.30.30 76 265 4.0E-7 T 14-10-2018 JO40_10605 cd90a9e77044274fc4e413a31ae1b8cc 302 Pfam PF04055 Radical SAM superfamily 31 191 1.7E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_10605 cd90a9e77044274fc4e413a31ae1b8cc 302 TIGRFAM TIGR04470 rSAM_mob_pairB: radical SAM mobile pair protein B 10 294 7.0E-183 T 14-10-2018 IPR031012 Radical SAM mobile pair protein B JO40_13230 8c4588a79a236357db21bef56d2381c2 73 SMART SM01234 5 72 5.6E-41 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor JO40_13230 8c4588a79a236357db21bef56d2381c2 73 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 20 72 3.0E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor JO40_13230 8c4588a79a236357db21bef56d2381c2 73 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 73 23.87 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor JO40_13230 8c4588a79a236357db21bef56d2381c2 73 Pfam PF01809 Haemolytic domain 8 72 3.4E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor JO40_13230 8c4588a79a236357db21bef56d2381c2 73 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 10 73 1.1E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor JO40_10935 c70a6a3609ecb9fc899d9ce5b85df34b 112 Gene3D G3DSA:2.60.40.730 25 112 4.0E-36 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 JO40_10935 c70a6a3609ecb9fc899d9ce5b85df34b 112 SUPERFAMILY SSF49367 22 111 3.4E-30 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 JO40_10935 c70a6a3609ecb9fc899d9ce5b85df34b 112 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 27 111 2.2E-20 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 JO40_10935 c70a6a3609ecb9fc899d9ce5b85df34b 112 Pfam PF01880 Desulfoferrodoxin 27 111 7.0E-24 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 42 386 1.0E-111 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 PIRSF PIRSF006809 20 389 3.2E-124 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 223 383 7.0E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 Gene3D G3DSA:3.40.50.300 226 389 2.5E-38 T 14-10-2018 JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 Gene3D G3DSA:3.40.50.11060 36 158 8.7E-31 T 14-10-2018 JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 Pfam PF01926 50S ribosome-binding GTPase 226 346 5.7E-16 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 SUPERFAMILY SSF52540 226 386 1.2E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 Pfam PF16360 GTP-binding GTPase Middle Region 134 217 5.2E-24 T 14-10-2018 IPR032305 GTP-binding protein, middle domain JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 Pfam PF13167 GTP-binding GTPase N-terminal 48 132 2.2E-22 T 14-10-2018 IPR025121 GTPase HflX, N-terminal JO40_05970 f307dbe8a369082596a140d3c26b9fef 390 Hamap MF_00900 GTPase HflX [hflX]. 47 389 41.523 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 JO40_05000 e5d7316133f937d534f278f5936b03e6 480 PIRSF PIRSF006247 1 480 4.5E-176 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JO40_05000 e5d7316133f937d534f278f5936b03e6 480 Pfam PF02386 Cation transport protein 41 260 8.4E-33 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 JO40_05000 e5d7316133f937d534f278f5936b03e6 480 Pfam PF02386 Cation transport protein 297 474 5.1E-24 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 JO40_11000 369831111db7dfd488b26a0dc0067dd3 178 SMART SM00100 20 137 9.1E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_11000 369831111db7dfd488b26a0dc0067dd3 178 Gene3D G3DSA:2.60.120.10 1 160 5.2E-30 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_11000 369831111db7dfd488b26a0dc0067dd3 178 SUPERFAMILY SSF51206 4 133 1.83E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_11000 369831111db7dfd488b26a0dc0067dd3 178 Pfam PF00027 Cyclic nucleotide-binding domain 39 123 9.8E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 SMART SM00283 409 656 1.2E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 SUPERFAMILY SSF58104 421 652 9.02E-46 T 14-10-2018 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 SUPERFAMILY SSF103190 119 187 5.89E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 SMART SM00304 312 366 1.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 Pfam PF00672 HAMP domain 312 358 5.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 SUPERFAMILY SSF58104 334 432 2.56E-9 T 14-10-2018 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 624 8.1E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 Gene3D G3DSA:1.10.287.950 312 428 7.4E-13 T 14-10-2018 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 Gene3D G3DSA:1.10.287.950 434 653 1.1E-42 T 14-10-2018 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 Gene3D G3DSA:3.30.450.20 151 293 3.2E-25 T 14-10-2018 JO40_04220 170beda9ae2b785c647a5fc5f9903f15 699 Pfam PF02743 Cache domain 40 274 1.6E-26 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_01745 11742886ea325475926bdafaf5d1f3c4 443 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 8 419 3.8E-173 T 14-10-2018 IPR021228 Protein of unknown function DUF2791 JO40_01745 11742886ea325475926bdafaf5d1f3c4 443 SUPERFAMILY SSF52540 34 354 4.09E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04940 86038b821195d435a7172d495ea60c21 522 SUPERFAMILY SSF90123 2 292 1.18E-28 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04940 86038b821195d435a7172d495ea60c21 522 Gene3D G3DSA:1.20.1560.10 1 302 7.8E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04940 86038b821195d435a7172d495ea60c21 522 SUPERFAMILY SSF52540 309 514 3.9E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04940 86038b821195d435a7172d495ea60c21 522 Gene3D G3DSA:3.40.50.300 309 521 1.2E-42 T 14-10-2018 JO40_04940 86038b821195d435a7172d495ea60c21 522 SMART SM00382 341 513 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04940 86038b821195d435a7172d495ea60c21 522 Pfam PF00005 ABC transporter 332 467 2.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04940 86038b821195d435a7172d495ea60c21 522 Pfam PF00664 ABC transporter transmembrane region 3 270 1.4E-6 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_09205 ca65f53791b2164cfbe6f25d10593c85 925 Gene3D G3DSA:2.60.40.10 416 506 7.1E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_09205 ca65f53791b2164cfbe6f25d10593c85 925 Gene3D G3DSA:2.60.40.10 295 409 1.1E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_07825 a2ece1696dd9e48719db8ad309aff5c5 387 Gene3D G3DSA:3.40.1710.10 60 147 3.6E-5 T 14-10-2018 JO40_07825 a2ece1696dd9e48719db8ad309aff5c5 387 Pfam PF12698 ABC-2 family transporter protein 24 372 1.6E-24 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 568 628 1.2E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Pfam PF00204 DNA gyrase B 223 395 1.3E-61 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Gene3D G3DSA:3.40.50.670 404 638 4.4E-103 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 425 439 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 509 526 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 571 587 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 529 541 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR00418 DNA topoisomerase II family signature 491 507 1.3E-71 T 14-10-2018 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 SMART SM00387 31 175 1.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Gene3D G3DSA:3.30.565.10 2 221 8.6E-84 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 637 9.4E-300 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 ProSitePatterns PS00177 DNA topoisomerase II signature. 427 435 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Gene3D G3DSA:3.30.230.10 222 403 2.7E-70 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 SUPERFAMILY SSF54211 223 396 1.02E-56 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 136 2.5E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 SUPERFAMILY SSF56719 399 630 9.42E-89 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 638 86.769 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 SMART SM00433 35 632 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 Pfam PF01751 Toprim domain 424 533 5.7E-17 T 14-10-2018 IPR006171 TOPRIM domain JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 475 484 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 608 624 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 6 16 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 379 399 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 181 196 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 196 209 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 317 333 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 365 379 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 222 244 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 PRINTS PR01159 DNA gyrase subunit B signature 592 604 4.7E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO40_06025 9869ae94eee9d31b808bf8947bf55574 638 SUPERFAMILY SSF55874 6 213 2.75E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_13155 444027afca5aaa9d2f548cf81d03496d 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 293 9.8E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO40_11610 b9b944e3d66fd5bb854017080cd801f2 288 Pfam PF08867 FRG domain 41 125 8.8E-18 T 14-10-2018 IPR014966 FRG domain JO40_11610 b9b944e3d66fd5bb854017080cd801f2 288 SMART SM00901 38 131 2.1E-27 T 14-10-2018 IPR014966 FRG domain JO40_07435 e5e50e1208fbbb05839404b310b61df6 180 SMART SM00855 2 153 5.2E-13 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO40_07435 e5e50e1208fbbb05839404b310b61df6 180 SUPERFAMILY SSF53254 1 179 3.53E-45 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO40_07435 e5e50e1208fbbb05839404b310b61df6 180 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JO40_07435 e5e50e1208fbbb05839404b310b61df6 180 Gene3D G3DSA:3.40.50.1240 1 180 4.9E-47 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO40_07435 e5e50e1208fbbb05839404b310b61df6 180 PIRSF PIRSF000709 1 178 2.2E-18 T 14-10-2018 JO40_07435 e5e50e1208fbbb05839404b310b61df6 180 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 178 2.3E-44 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO40_12945 9135b6912a300dd5b39097cb2b7aaeb9 142 SUPERFAMILY SSF82784 2 139 2.49E-32 T 14-10-2018 IPR036102 OsmC/Ohr superfamily JO40_12945 9135b6912a300dd5b39097cb2b7aaeb9 142 Pfam PF02566 OsmC-like protein 35 137 3.5E-20 T 14-10-2018 IPR003718 OsmC/Ohr family JO40_12945 9135b6912a300dd5b39097cb2b7aaeb9 142 Gene3D G3DSA:3.30.300.20 1 142 1.5E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_06100 9fdd361dfdb11ddcb1d07fa2017382f6 171 SUPERFAMILY SSF55469 1 167 1.96E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JO40_06100 9fdd361dfdb11ddcb1d07fa2017382f6 171 Pfam PF00881 Nitroreductase family 9 67 1.3E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JO40_06100 9fdd361dfdb11ddcb1d07fa2017382f6 171 Pfam PF00881 Nitroreductase family 71 153 3.5E-10 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JO40_06100 9fdd361dfdb11ddcb1d07fa2017382f6 171 Gene3D G3DSA:3.40.109.10 1 171 7.3E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JO40_04830 443e4cd8fd9d62564005180e00fd5a94 590 Gene3D G3DSA:1.20.1560.10 129 327 1.3E-10 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04830 443e4cd8fd9d62564005180e00fd5a94 590 SMART SM00382 367 565 6.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04830 443e4cd8fd9d62564005180e00fd5a94 590 Gene3D G3DSA:3.40.50.300 336 589 4.4E-70 T 14-10-2018 JO40_04830 443e4cd8fd9d62564005180e00fd5a94 590 Pfam PF00664 ABC transporter transmembrane region 142 288 4.2E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_04830 443e4cd8fd9d62564005180e00fd5a94 590 SUPERFAMILY SSF52540 333 583 6.44E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04830 443e4cd8fd9d62564005180e00fd5a94 590 Pfam PF00005 ABC transporter 358 513 9.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04830 443e4cd8fd9d62564005180e00fd5a94 590 SUPERFAMILY SSF90123 12 306 1.57E-20 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_10585 4e18f26a79081ccbbd1402c3247fc84d 380 SUPERFAMILY SSF81891 164 259 5.36E-19 T 14-10-2018 JO40_10585 4e18f26a79081ccbbd1402c3247fc84d 380 Gene3D G3DSA:1.10.3090.10 164 335 2.5E-21 T 14-10-2018 JO40_10585 4e18f26a79081ccbbd1402c3247fc84d 380 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 202 251 9.1E-13 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO40_10585 4e18f26a79081ccbbd1402c3247fc84d 380 Pfam PF01743 Poly A polymerase head domain 50 165 7.1E-34 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO40_10585 4e18f26a79081ccbbd1402c3247fc84d 380 Gene3D G3DSA:3.30.460.10 16 161 9.6E-52 T 14-10-2018 JO40_10585 4e18f26a79081ccbbd1402c3247fc84d 380 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 19 338 7.8E-103 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 JO40_10585 4e18f26a79081ccbbd1402c3247fc84d 380 SUPERFAMILY SSF81301 36 162 1.63E-36 T 14-10-2018 JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 SMART SM00382 396 582 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 Pfam PF00664 ABC transporter transmembrane region 17 275 1.5E-26 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 SUPERFAMILY SSF90123 3 311 4.45E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 SUPERFAMILY SSF52540 383 606 1.07E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 Gene3D G3DSA:1.20.1560.10 1 313 2.2E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 Pfam PF00005 ABC transporter 388 536 4.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_12380 ef1c4396c7a82c5641906d9433baca72 614 Gene3D G3DSA:3.40.50.300 383 606 1.2E-89 T 14-10-2018 JO40_05250 fcf3f9b18656b0a1df561fb6aa516376 136 SUPERFAMILY SSF88723 2 118 3.36E-10 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_05250 fcf3f9b18656b0a1df561fb6aa516376 136 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 112 4.2E-9 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO40_05250 fcf3f9b18656b0a1df561fb6aa516376 136 Pfam PF13470 PIN domain 2 110 8.7E-8 T 14-10-2018 IPR002716 PIN domain JO40_08515 e038a3f4cdee1856787de1e3a5741b59 187 Gene3D G3DSA:3.40.50.150 1 187 9.0E-51 T 14-10-2018 JO40_08515 e038a3f4cdee1856787de1e3a5741b59 187 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 15 137 1.1E-29 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 JO40_08515 e038a3f4cdee1856787de1e3a5741b59 187 SUPERFAMILY SSF53335 15 159 3.58E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_08515 e038a3f4cdee1856787de1e3a5741b59 187 Pfam PF03602 Conserved hypothetical protein 95 33 132 5.7E-9 T 14-10-2018 JO40_11850 cb9e26c1f0f53acb50c91db408351553 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 136 7.2E-19 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain JO40_11850 cb9e26c1f0f53acb50c91db408351553 154 Gene3D G3DSA:3.40.1550.10 1 154 1.0E-40 T 14-10-2018 IPR028976 CheC-like superfamily JO40_11850 cb9e26c1f0f53acb50c91db408351553 154 SUPERFAMILY SSF103039 1 150 1.83E-35 T 14-10-2018 IPR028976 CheC-like superfamily JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 Pfam PF00166 Chaperonin 10 Kd subunit 2 87 1.5E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 53 65 9.0E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 74 87 9.0E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 25 46 9.0E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 3 18 9.0E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 SUPERFAMILY SSF50129 1 88 4.13E-27 T 14-10-2018 IPR011032 GroES-like superfamily JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 SMART SM00883 2 87 5.2E-39 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 Hamap MF_00580 10 kDa chaperonin [groS]. 2 88 21.384 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 JO40_06965 03eb375532a3b20a917ff4de72b5d69f 88 Gene3D G3DSA:2.30.33.40 1 88 1.3E-28 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 JO40_06410 6deeb4a445258524796f7bbb8c10dcd0 418 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 413 1.8E-171 T 14-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola JO40_06410 6deeb4a445258524796f7bbb8c10dcd0 418 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 1 413 9.9E-161 T 14-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola JO40_09360 13b4d09333a30a84521ec4c34e5ab28c 153 Pfam PF00583 Acetyltransferase (GNAT) family 45 135 1.7E-14 T 14-10-2018 IPR000182 GNAT domain JO40_09360 13b4d09333a30a84521ec4c34e5ab28c 153 SUPERFAMILY SSF55729 6 141 3.38E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_09360 13b4d09333a30a84521ec4c34e5ab28c 153 Gene3D G3DSA:3.40.630.30 1 144 1.0E-19 T 14-10-2018 JO40_02085 6cdf8819c3e226ac8e37d8d4fe117fea 135 Gene3D G3DSA:3.10.450.590 20 133 6.1E-15 T 14-10-2018 JO40_02085 6cdf8819c3e226ac8e37d8d4fe117fea 135 Pfam PF13026 Protein of unknown function (DUF3887) 37 132 2.4E-16 T 14-10-2018 IPR024981 Domain of unknown function DUF3887 KEGG: 00983+3.1.1.1|MetaCyc: PWY-6303|MetaCyc: PWY-6857 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 SUPERFAMILY SSF56601 197 540 1.8E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 SUPERFAMILY SSF54184 567 619 1.31E-9 T 14-10-2018 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 Gene3D G3DSA:3.90.1310.30 43 199 1.9E-33 T 14-10-2018 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 162 5.7E-12 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 Pfam PF03793 PASTA domain 567 619 2.6E-9 T 14-10-2018 IPR005543 PASTA domain JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 Gene3D G3DSA:3.30.450.330 200 536 1.1E-83 T 14-10-2018 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 Gene3D G3DSA:3.30.10.20 565 620 5.9E-5 T 14-10-2018 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 SUPERFAMILY SSF56519 46 190 5.89E-31 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 SMART SM00740 562 620 2.2E-5 T 14-10-2018 IPR005543 PASTA domain JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 Gene3D G3DSA:3.40.710.10 258 452 1.1E-83 T 14-10-2018 JO40_12090 05ee9593fbdf6226fc16f45c7885d910 620 Pfam PF00905 Penicillin binding protein transpeptidase domain 224 528 3.1E-52 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 SUPERFAMILY SSF82866 685 876 4.32E-32 T 14-10-2018 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 Pfam PF03176 MMPL family 683 883 3.5E-18 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 Pfam PF03176 MMPL family 39 383 1.5E-16 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 Gene3D G3DSA:1.20.1640.10 210 387 4.6E-13 T 14-10-2018 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 Gene3D G3DSA:1.20.1640.10 702 888 3.7E-15 T 14-10-2018 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 SUPERFAMILY SSF82866 182 371 8.11E-29 T 14-10-2018 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 PRINTS PR00702 Acriflavin resistance protein family signature 774 798 1.2E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 PRINTS PR00702 Acriflavin resistance protein family signature 746 767 1.2E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 PRINTS PR00702 Acriflavin resistance protein family signature 849 872 1.2E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JO40_02425 f39768a1b30b5cd64c5dafe9bb9a5bfd 898 PRINTS PR00702 Acriflavin resistance protein family signature 719 742 1.2E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JO40_02640 42773f3e823ec1f6464d73ae75f7d842 240 SUPERFAMILY SSF53790 3 237 2.49E-53 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JO40_02640 42773f3e823ec1f6464d73ae75f7d842 240 Gene3D G3DSA:3.30.950.10 109 239 1.2E-52 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JO40_02640 42773f3e823ec1f6464d73ae75f7d842 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 206 3.0E-37 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JO40_02640 42773f3e823ec1f6464d73ae75f7d842 240 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 238 4.6E-90 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 JO40_02640 42773f3e823ec1f6464d73ae75f7d842 240 Gene3D G3DSA:3.40.1010.10 1 108 2.5E-27 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JO40_02685 b2516d5962c728612384a6fc9411a6ed 251 PIRSF PIRSF009320 92 250 1.2E-6 T 14-10-2018 JO40_02685 b2516d5962c728612384a6fc9411a6ed 251 PIRSF PIRSF009320 2 100 1.1E-14 T 14-10-2018 JO40_02685 b2516d5962c728612384a6fc9411a6ed 251 Pfam PF13614 AAA domain 3 176 1.9E-61 T 14-10-2018 IPR025669 AAA domain JO40_02685 b2516d5962c728612384a6fc9411a6ed 251 SUPERFAMILY SSF52540 1 250 7.0E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02685 b2516d5962c728612384a6fc9411a6ed 251 Gene3D G3DSA:3.40.50.300 1 250 3.1E-80 T 14-10-2018 JO40_02150 5255493cdc3e4d0cc21efba5dcbee9fe 144 Pfam PF00583 Acetyltransferase (GNAT) family 46 140 1.2E-15 T 14-10-2018 IPR000182 GNAT domain JO40_02150 5255493cdc3e4d0cc21efba5dcbee9fe 144 Gene3D G3DSA:3.40.630.30 15 144 6.0E-24 T 14-10-2018 JO40_02150 5255493cdc3e4d0cc21efba5dcbee9fe 144 SUPERFAMILY SSF55729 20 142 4.13E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_08770 a9474595e23fe4b5e62fa79f1de84ec0 341 SUPERFAMILY SSF53335 11 328 2.6E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_08770 a9474595e23fe4b5e62fa79f1de84ec0 341 Gene3D G3DSA:3.30.750.80 8 116 2.0E-24 T 14-10-2018 JO40_08770 a9474595e23fe4b5e62fa79f1de84ec0 341 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 71 300 7.5E-25 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 JO40_08770 a9474595e23fe4b5e62fa79f1de84ec0 341 Gene3D G3DSA:3.40.50.150 117 340 2.1E-69 T 14-10-2018 JO40_10475 1d78c730c78b65a2831397f00ff9d031 119 Pfam PF02410 Ribosomal silencing factor during starvation 15 110 4.2E-22 T 14-10-2018 JO40_10475 1d78c730c78b65a2831397f00ff9d031 119 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 111 19.213 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JO40_10475 1d78c730c78b65a2831397f00ff9d031 119 SUPERFAMILY SSF81301 10 115 2.62E-28 T 14-10-2018 JO40_10475 1d78c730c78b65a2831397f00ff9d031 119 Gene3D G3DSA:3.30.460.10 11 119 2.2E-26 T 14-10-2018 JO40_10475 1d78c730c78b65a2831397f00ff9d031 119 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 15 110 3.0E-28 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JO40_08990 20c45a1a32310673dd558080610fca0b 463 Gene3D G3DSA:1.10.10.60 407 463 4.0E-13 T 14-10-2018 JO40_08990 20c45a1a32310673dd558080610fca0b 463 Gene3D G3DSA:1.10.10.1330 80 217 5.2E-10 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily JO40_08990 20c45a1a32310673dd558080610fca0b 463 PRINTS PR00045 Sigma-54 factor signature 439 457 1.8E-6 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO40_08990 20c45a1a32310673dd558080610fca0b 463 PRINTS PR00045 Sigma-54 factor signature 150 167 1.8E-6 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO40_08990 20c45a1a32310673dd558080610fca0b 463 Pfam PF04552 Sigma-54, DNA binding domain 299 462 8.3E-34 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding JO40_08990 20c45a1a32310673dd558080610fca0b 463 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 49 3.9E-10 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO40_08990 20c45a1a32310673dd558080610fca0b 463 Pfam PF04963 Sigma-54 factor, core binding domain 79 285 8.1E-32 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 JO40_08990 20c45a1a32310673dd558080610fca0b 463 PIRSF PIRSF000774 1 463 8.2E-135 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO40_08990 20c45a1a32310673dd558080610fca0b 463 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 462 1.2E-86 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 SMART SM00228 207 278 1.9E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 SMART SM00228 114 194 6.1E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 Pfam PF02163 Peptidase family M50 8 434 7.7E-63 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 Gene3D G3DSA:2.30.42.10 220 305 6.2E-14 T 14-10-2018 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 SUPERFAMILY SSF50156 102 202 1.26E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 Pfam PF13180 PDZ domain 145 195 4.9E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 Pfam PF13180 PDZ domain 224 287 1.4E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 Gene3D G3DSA:2.30.42.10 144 218 6.0E-17 T 14-10-2018 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 444 2.0E-89 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 JO40_00050 20a2019d73aa7a602ffe9d3a56c35217 450 SUPERFAMILY SSF50156 222 305 1.13E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 Pfam PF00543 Nitrogen regulatory protein P-II 121 214 2.5E-9 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 SUPERFAMILY SSF54913 2 94 2.85E-7 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 SUPERFAMILY SSF54913 120 213 1.91E-20 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 Gene3D G3DSA:3.30.70.120 114 213 2.2E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 Gene3D G3DSA:3.30.70.120 1 99 3.8E-5 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 PRINTS PR00340 P-II protein signature 139 157 7.5E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 PRINTS PR00340 P-II protein signature 194 214 7.5E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 PRINTS PR00340 P-II protein signature 163 186 7.5E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JO40_04850 9d52bc9f960935e5064c6a4de8d8e01c 214 SMART SM00938 120 214 2.6E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 Pfam PF09190 DALR domain 380 427 5.4E-5 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 SUPERFAMILY SSF52374 3 328 2.65E-87 T 14-10-2018 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 204 222 1.4E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.4E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.4E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 235 256 1.4E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 491 1.6E-147 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 Gene3D G3DSA:1.20.120.1910 320 491 9.3E-36 T 14-10-2018 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 SUPERFAMILY SSF47323 368 491 3.66E-26 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 492 34.787 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 SMART SM00840 379 432 0.0019 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 327 4.6E-100 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 JO40_04980 b7c5eed981fba089f686b8043f3571ab 492 Gene3D G3DSA:3.40.50.620 1 319 5.2E-132 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_05985 96d479ee82be7000bb71f399fe5c862d 334 Gene3D G3DSA:3.20.20.70 15 264 5.1E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_05985 96d479ee82be7000bb71f399fe5c862d 334 SUPERFAMILY SSF51395 20 332 1.54E-72 T 14-10-2018 JO40_05985 96d479ee82be7000bb71f399fe5c862d 334 PIRSF PIRSF006621 11 333 1.5E-82 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JO40_05985 96d479ee82be7000bb71f399fe5c862d 334 Pfam PF01207 Dihydrouridine synthase (Dus) 22 328 2.6E-73 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JO40_05985 96d479ee82be7000bb71f399fe5c862d 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 JO40_05985 96d479ee82be7000bb71f399fe5c862d 334 Gene3D G3DSA:1.10.1200.80 265 334 5.7E-12 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 JO40_05985 96d479ee82be7000bb71f399fe5c862d 334 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 11 332 5.8E-110 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 JO40_11965 472e0d22099ba64c6855ebec357c50e8 221 Gene3D G3DSA:3.30.420.40 3 213 2.0E-29 T 14-10-2018 JO40_11965 472e0d22099ba64c6855ebec357c50e8 221 Pfam PF00814 Glycoprotease family 31 147 2.7E-15 T 14-10-2018 IPR000905 Gcp-like domain JO40_11965 472e0d22099ba64c6855ebec357c50e8 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 175 5.8E-34 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 JO40_11965 472e0d22099ba64c6855ebec357c50e8 221 Gene3D G3DSA:3.30.420.40 95 182 2.0E-29 T 14-10-2018 JO40_11965 472e0d22099ba64c6855ebec357c50e8 221 SUPERFAMILY SSF53067 1 101 2.72E-18 T 14-10-2018 JO40_02505 e8dee562647c4967a233b97831314381 271 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 2.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_02505 e8dee562647c4967a233b97831314381 271 PRINTS PR00996 Glutamate methyltransferase family signature 29 42 2.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_02505 e8dee562647c4967a233b97831314381 271 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 2.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_02505 e8dee562647c4967a233b97831314381 271 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 2.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_02505 e8dee562647c4967a233b97831314381 271 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 2.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_02505 e8dee562647c4967a233b97831314381 271 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 2.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_02505 e8dee562647c4967a233b97831314381 271 SMART SM00138 7 269 3.5E-108 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO40_02505 e8dee562647c4967a233b97831314381 271 SUPERFAMILY SSF47757 5 72 8.63E-15 T 14-10-2018 JO40_02505 e8dee562647c4967a233b97831314381 271 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 264 2.2E-67 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JO40_02505 e8dee562647c4967a233b97831314381 271 Pfam PF03705 CheR methyltransferase, all-alpha domain 8 59 1.0E-11 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JO40_02505 e8dee562647c4967a233b97831314381 271 Gene3D G3DSA:3.40.50.150 72 270 4.8E-62 T 14-10-2018 JO40_02505 e8dee562647c4967a233b97831314381 271 Gene3D G3DSA:1.10.155.10 2 71 3.2E-14 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily JO40_02505 e8dee562647c4967a233b97831314381 271 PIRSF PIRSF000410 2 269 6.0E-79 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR JO40_02505 e8dee562647c4967a233b97831314381 271 SUPERFAMILY SSF53335 73 266 2.45E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_05895 03a074cd54a058a0ebf19e96a35fe955 219 Pfam PF04347 Flagellar biosynthesis protein, FliO 109 185 1.6E-10 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 JO40_05895 03a074cd54a058a0ebf19e96a35fe955 219 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 84 153 1.6E-17 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 JO40_04725 3afc8798c0c24752da108b365070e583 683 SUPERFAMILY SSF54211 473 602 7.59E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_04725 3afc8798c0c24752da108b365070e583 683 PRINTS PR00315 GTP-binding elongation factor signature 7 20 4.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 PRINTS PR00315 GTP-binding elongation factor signature 53 61 4.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 PRINTS PR00315 GTP-binding elongation factor signature 73 83 4.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 PRINTS PR00315 GTP-binding elongation factor signature 125 134 4.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 PRINTS PR00315 GTP-binding elongation factor signature 89 100 4.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 Pfam PF00679 Elongation factor G C-terminus 603 680 3.9E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO40_04725 3afc8798c0c24752da108b365070e583 683 Pfam PF00009 Elongation factor Tu GTP binding domain 4 275 8.8E-70 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 Pfam PF14492 Elongation Factor G, domain II 398 471 6.6E-27 T 14-10-2018 JO40_04725 3afc8798c0c24752da108b365070e583 683 Gene3D G3DSA:2.40.30.10 287 399 4.9E-36 T 14-10-2018 JO40_04725 3afc8798c0c24752da108b365070e583 683 Gene3D G3DSA:3.30.70.240 607 677 6.2E-63 T 14-10-2018 JO40_04725 3afc8798c0c24752da108b365070e583 683 SUPERFAMILY SSF50447 259 398 1.96E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_04725 3afc8798c0c24752da108b365070e583 683 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 174 1.0E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 SUPERFAMILY SSF52540 3 275 2.01E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04725 3afc8798c0c24752da108b365070e583 683 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JO40_04725 3afc8798c0c24752da108b365070e583 683 Gene3D G3DSA:3.30.230.10 478 680 6.2E-63 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_04725 3afc8798c0c24752da108b365070e583 683 Gene3D G3DSA:3.30.70.870 400 477 2.8E-26 T 14-10-2018 JO40_04725 3afc8798c0c24752da108b365070e583 683 Pfam PF03144 Elongation factor Tu domain 2 318 384 9.6E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 Gene3D G3DSA:3.40.50.300 1 286 1.5E-108 T 14-10-2018 JO40_04725 3afc8798c0c24752da108b365070e583 683 SUPERFAMILY SSF54980 606 681 2.11E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_04725 3afc8798c0c24752da108b365070e583 683 Pfam PF03764 Elongation factor G, domain IV 473 600 2.4E-22 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 680 2.6E-258 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_04725 3afc8798c0c24752da108b365070e583 683 SMART SM00838 603 681 4.0E-30 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO40_04725 3afc8798c0c24752da108b365070e583 683 SMART SM00889 474 601 3.4E-24 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO40_04725 3afc8798c0c24752da108b365070e583 683 SUPERFAMILY SSF54980 398 475 2.88E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_04725 3afc8798c0c24752da108b365070e583 683 Hamap MF_00054_B Elongation factor G [fusA]. 1 683 98.704 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 SUPERFAMILY SSF52283 14 140 6.05E-31 T 14-10-2018 JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 291 3.1E-60 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 Gene3D G3DSA:3.40.50.720 101 290 4.0E-120 T 14-10-2018 JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 SUPERFAMILY SSF51735 102 292 3.74E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 Gene3D G3DSA:3.40.50.720 19 319 4.0E-120 T 14-10-2018 JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 322 4.7E-30 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JO40_11425 c15f94f1d4601ae2e7923568526ad497 322 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.5E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.5E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.5E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.5E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.5E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 7.0E-57 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 157 29.375 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 Gene3D G3DSA:3.40.50.620 2 157 3.5E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 59 1.1E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 Pfam PF01467 Cytidylyltransferase-like 5 133 6.0E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO40_09515 6847948b5a1c90ca0d9371566a9ef70d 157 SUPERFAMILY SSF52374 1 156 2.1E-42 T 14-10-2018 JO40_04525 edf1aeebd7006e5685e33ef049b70c62 132 Gene3D G3DSA:3.40.50.1010 2 127 2.9E-25 T 14-10-2018 JO40_04525 edf1aeebd7006e5685e33ef049b70c62 132 Pfam PF01850 PIN domain 3 124 6.6E-8 T 14-10-2018 IPR002716 PIN domain JO40_04525 edf1aeebd7006e5685e33ef049b70c62 132 SUPERFAMILY SSF88723 3 130 3.08E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_10560 f1c9bd016195d6b6f9d915f4ef87d91c 467 Gene3D G3DSA:1.20.1250.20 236 458 1.2E-9 T 14-10-2018 JO40_10560 f1c9bd016195d6b6f9d915f4ef87d91c 467 SUPERFAMILY SSF103473 16 458 1.24E-38 T 14-10-2018 IPR036259 MFS transporter superfamily JO40_10560 f1c9bd016195d6b6f9d915f4ef87d91c 467 Pfam PF07690 Major Facilitator Superfamily 52 329 8.5E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JO40_10560 f1c9bd016195d6b6f9d915f4ef87d91c 467 Gene3D G3DSA:1.20.1250.20 13 221 2.8E-19 T 14-10-2018 JO40_05655 bf50d2ffce78a22de8df8759bf0cfe12 144 Gene3D G3DSA:3.40.630.30 1 143 7.1E-34 T 14-10-2018 JO40_05655 bf50d2ffce78a22de8df8759bf0cfe12 144 Pfam PF00583 Acetyltransferase (GNAT) family 26 131 3.9E-16 T 14-10-2018 IPR000182 GNAT domain JO40_05655 bf50d2ffce78a22de8df8759bf0cfe12 144 SUPERFAMILY SSF55729 1 139 7.15E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_05655 bf50d2ffce78a22de8df8759bf0cfe12 144 PIRSF PIRSF000452 1 144 4.7E-40 T 14-10-2018 IPR024170 Aminoglycoside N6-acetyltransferase JO40_07375 819154f988641773cf000ff3066b1e7f 485 Gene3D G3DSA:3.90.226.10 191 306 1.7E-7 T 14-10-2018 JO40_07375 819154f988641773cf000ff3066b1e7f 485 Pfam PF03572 Peptidase family S41 230 461 1.5E-14 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JO40_07375 819154f988641773cf000ff3066b1e7f 485 SUPERFAMILY SSF52096 28 483 7.62E-34 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_07375 819154f988641773cf000ff3066b1e7f 485 Gene3D G3DSA:3.90.226.10 337 485 9.3E-14 T 14-10-2018 JO40_03105 ca3938feffa906a438a87b38b5e7e292 283 Pfam PF10020 Uncharacterized protein conserved in bacteria (DUF2262) 143 280 1.6E-45 T 14-10-2018 IPR019260 Domain of unknown function DUF2262 JO40_03105 ca3938feffa906a438a87b38b5e7e292 283 PIRSF PIRSF033642 1 283 8.6E-114 T 14-10-2018 IPR024198 Uncharacterised conserved protein, UCP033642 JO40_00095 0eb53a3b86f90ae0173f8595c606ce21 199 SUPERFAMILY SSF55729 41 121 1.69E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 SUPERFAMILY SSF54211 4 207 2.35E-55 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PIRSF PIRSF000530 1 395 1.2E-125 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 Pfam PF00288 GHMP kinases N terminal domain 120 186 1.1E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 TIGRFAM TIGR00131 gal_kin: galactokinase 8 393 1.4E-101 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00473 Galactokinase signature 96 107 6.8E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00473 Galactokinase signature 117 135 6.8E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00473 Galactokinase signature 277 291 6.8E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00473 Galactokinase signature 32 50 6.8E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 SUPERFAMILY SSF55060 211 394 6.37E-47 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 Pfam PF08544 GHMP kinases C terminal 293 373 1.0E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 Gene3D G3DSA:3.30.70.890 207 370 1.6E-117 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 Hamap MF_00246 Galactokinase [galK]. 30 394 40.587 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00959 Mevalonate kinase family signature 341 358 2.2E-39 T 14-10-2018 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00959 Mevalonate kinase family signature 30 54 2.2E-39 T 14-10-2018 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00959 Mevalonate kinase family signature 167 186 2.2E-39 T 14-10-2018 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 PRINTS PR00959 Mevalonate kinase family signature 124 146 2.2E-39 T 14-10-2018 JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 Gene3D G3DSA:3.30.230.10 27 206 1.6E-117 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_00540 fbb0c9d7275da1902a2b58284a206914 395 Pfam PF10509 Galactokinase galactose-binding signature 13 62 8.9E-17 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO40_11385 6bb52cbb863b0099b45693fb4f82ae39 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_11385 6bb52cbb863b0099b45693fb4f82ae39 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_11385 6bb52cbb863b0099b45693fb4f82ae39 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.4E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_11385 6bb52cbb863b0099b45693fb4f82ae39 211 Gene3D G3DSA:1.10.357.10 5 206 5.6E-21 T 14-10-2018 JO40_11385 6bb52cbb863b0099b45693fb4f82ae39 211 SUPERFAMILY SSF46689 6 70 6.67E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Pfam PF00679 Elongation factor G C-terminus 596 681 4.9E-26 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 SUPERFAMILY SSF52540 4 280 3.04E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 SUPERFAMILY SSF54211 478 594 3.03E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 SUPERFAMILY SSF54980 398 476 4.68E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Hamap MF_00054_B Elongation factor G [fusA]. 4 686 106.025 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Gene3D G3DSA:3.30.230.10 480 681 4.3E-78 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 4 685 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 180 9.6E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Gene3D G3DSA:3.30.70.870 402 479 1.5E-28 T 14-10-2018 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 SMART SM00838 595 682 1.4E-39 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 SUPERFAMILY SSF50447 248 398 8.84E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Pfam PF00009 Elongation factor Tu GTP binding domain 7 279 1.2E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Pfam PF14492 Elongation Factor G, domain II 400 473 2.5E-32 T 14-10-2018 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Gene3D G3DSA:3.40.50.300 2 290 5.3E-100 T 14-10-2018 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 SUPERFAMILY SSF54980 598 689 5.76E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Gene3D G3DSA:2.40.30.10 291 401 4.8E-30 T 14-10-2018 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Pfam PF03764 Elongation factor G, domain IV 475 593 1.2E-38 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Gene3D G3DSA:3.30.70.240 599 669 4.3E-78 T 14-10-2018 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 Pfam PF03144 Elongation factor Tu domain 2 321 387 4.1E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 SMART SM00889 476 593 6.1E-60 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO40_00390 6c6a59881e5d549b6b817c8f83c4beab 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JO40_09250 0bd631bd2bf3f89a01a6c7d9087d115c 429 SUPERFAMILY SSF52540 14 293 1.36E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09250 0bd631bd2bf3f89a01a6c7d9087d115c 429 Pfam PF13177 DNA polymerase III, delta subunit 14 258 7.1E-35 T 14-10-2018 JO40_09395 444805dadb229f2408d00499c8a1a17c 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 312 7.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO40_09395 444805dadb229f2408d00499c8a1a17c 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 296 7.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO40_09395 444805dadb229f2408d00499c8a1a17c 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 308 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JO40_09395 444805dadb229f2408d00499c8a1a17c 315 Pfam PF12833 Helix-turn-helix domain 235 313 3.9E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO40_09395 444805dadb229f2408d00499c8a1a17c 315 SMART SM00342 229 312 6.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO40_09395 444805dadb229f2408d00499c8a1a17c 315 SUPERFAMILY SSF46689 265 314 2.2E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_09395 444805dadb229f2408d00499c8a1a17c 315 Gene3D G3DSA:1.10.10.60 208 315 1.6E-25 T 14-10-2018 JO40_08225 782531b392df48940808d55f9b324b35 426 SUPERFAMILY SSF50630 156 272 5.33E-12 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JO40_08225 782531b392df48940808d55f9b324b35 426 SUPERFAMILY SSF50630 304 414 3.1E-12 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JO40_08225 782531b392df48940808d55f9b324b35 426 Gene3D G3DSA:2.40.70.10 298 424 2.2E-13 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JO40_08225 782531b392df48940808d55f9b324b35 426 Pfam PF13650 Aspartyl protease 166 262 1.5E-9 T 14-10-2018 JO40_08225 782531b392df48940808d55f9b324b35 426 Pfam PF13650 Aspartyl protease 312 407 2.5E-9 T 14-10-2018 JO40_08225 782531b392df48940808d55f9b324b35 426 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 177 188 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 JO40_08225 782531b392df48940808d55f9b324b35 426 Gene3D G3DSA:2.40.70.10 139 287 9.3E-16 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JO40_05345 e87a779382e0e12fc23d48e9095356c5 390 Gene3D G3DSA:3.90.1510.10 43 285 5.2E-128 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 JO40_05345 e87a779382e0e12fc23d48e9095356c5 390 PIRSF PIRSF006078 2 387 1.2E-131 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JO40_05345 e87a779382e0e12fc23d48e9095356c5 390 Gene3D G3DSA:3.40.50.10350 3 371 5.2E-128 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold JO40_05345 e87a779382e0e12fc23d48e9095356c5 390 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 384 2.3E-128 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JO40_05345 e87a779382e0e12fc23d48e9095356c5 390 SUPERFAMILY SSF110738 3 384 4.05E-119 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 JO40_05345 e87a779382e0e12fc23d48e9095356c5 390 Pfam PF02595 Glycerate kinase family 4 383 3.9E-134 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JO40_04030 3cd52500704e272a642176e67369edbf 443 Gene3D G3DSA:2.60.120.10 312 437 3.2E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_04030 3cd52500704e272a642176e67369edbf 443 SMART SM00100 318 428 4.5E-5 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_04030 3cd52500704e272a642176e67369edbf 443 Pfam PF03631 Virulence factor BrkB 42 295 4.8E-34 T 14-10-2018 IPR017039 Virulence factor BrkB JO40_04030 3cd52500704e272a642176e67369edbf 443 SUPERFAMILY SSF51206 334 429 4.58E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_04030 3cd52500704e272a642176e67369edbf 443 Pfam PF00027 Cyclic nucleotide-binding domain 336 414 5.2E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_11485 828b3d5896d8b9ea518baa5995f36009 289 PIRSF PIRSF015582 1 289 6.7E-79 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like JO40_11485 828b3d5896d8b9ea518baa5995f36009 289 SUPERFAMILY SSF51621 3 233 9.03E-55 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO40_11485 828b3d5896d8b9ea518baa5995f36009 289 Gene3D G3DSA:3.20.20.60 1 287 3.5E-93 T 14-10-2018 JO40_11485 828b3d5896d8b9ea518baa5995f36009 289 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 222 4.1E-51 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JO40_03465 bb7512ba271b4f9a5c25b4dd1eceb344 504 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 309 321 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 JO40_03465 bb7512ba271b4f9a5c25b4dd1eceb344 504 Gene3D G3DSA:3.20.20.70 5 502 6.0E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_03465 bb7512ba271b4f9a5c25b4dd1eceb344 504 SUPERFAMILY SSF51412 6 493 8.11E-102 T 14-10-2018 JO40_03465 bb7512ba271b4f9a5c25b4dd1eceb344 504 SMART SM01240 8 489 1.6E-184 T 14-10-2018 JO40_03465 bb7512ba271b4f9a5c25b4dd1eceb344 504 SUPERFAMILY SSF54631 110 214 2.2E-19 T 14-10-2018 JO40_03465 bb7512ba271b4f9a5c25b4dd1eceb344 504 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 489 4.6E-115 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 JO40_03465 bb7512ba271b4f9a5c25b4dd1eceb344 504 PIRSF PIRSF000130 2 504 5.7E-141 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 Gene3D G3DSA:3.40.50.300 329 577 5.8E-85 T 14-10-2018 JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 SMART SM00382 359 545 4.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 Pfam PF00005 ABC transporter 351 499 5.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 SUPERFAMILY SSF90123 6 322 5.23E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 Pfam PF00664 ABC transporter transmembrane region 41 287 9.9E-13 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 Gene3D G3DSA:1.20.1560.10 2 322 6.6E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03210 2b59d7ec3d1be3be492e438e159cff22 579 SUPERFAMILY SSF52540 330 566 1.36E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02470 db1e3fdd3277101b398c2b7ada63baf0 488 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 459 1.6E-69 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JO40_02470 db1e3fdd3277101b398c2b7ada63baf0 488 SUPERFAMILY SSF101960 54 485 6.41E-131 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JO40_02470 db1e3fdd3277101b398c2b7ada63baf0 488 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 34 479 8.1E-207 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 JO40_07080 580e0a507a5d813daf6566e8597c0790 118 SUPERFAMILY SSF50891 1 95 4.55E-11 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JO40_07080 580e0a507a5d813daf6566e8597c0790 118 Gene3D G3DSA:2.40.100.20 1 112 3.9E-11 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00943 Copper-transporting ATPase signature 378 392 2.1E-7 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00943 Copper-transporting ATPase signature 703 717 2.1E-7 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00943 Copper-transporting ATPase signature 48 68 2.1E-7 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00943 Copper-transporting ATPase signature 438 453 2.1E-7 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Pfam PF00702 haloacid dehalogenase-like hydrolase 452 683 8.9E-39 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 605 3.1E-28 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 692 704 3.1E-28 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.1E-28 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 616 626 3.1E-28 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 469 3.1E-28 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 669 688 3.1E-28 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 ProSitePatterns PS01047 Heavy-metal-associated domain. 818 846 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 SUPERFAMILY SSF81665 223 746 3.66E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Gene3D G3DSA:2.70.150.20 248 360 1.1E-42 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Gene3D G3DSA:3.40.50.1000 436 720 1.5E-84 T 14-10-2018 IPR023214 HAD superfamily JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Pfam PF00122 E1-E2 ATPase 256 434 8.6E-63 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 SUPERFAMILY SSF81653 258 355 1.31E-29 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Gene3D G3DSA:3.30.70.100 1 71 3.3E-22 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 457 463 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 816 876 1.6E-13 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 4 67 5.1E-13 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Pfam PF00403 Heavy-metal-associated domain 7 66 1.5E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Pfam PF00403 Heavy-metal-associated domain 815 874 4.5E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Gene3D G3DSA:3.30.70.100 806 876 1.6E-18 T 14-10-2018 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 227 751 4.2E-90 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 SUPERFAMILY SSF55008 809 876 7.2E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 SUPERFAMILY SSF55008 2 71 1.44E-19 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 SUPERFAMILY SSF56784 453 776 5.5E-54 T 14-10-2018 IPR036412 HAD-like superfamily JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 Gene3D G3DSA:3.40.1110.10 466 601 1.5E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JO40_05350 b78e082e350bbf7ffa3790fd1844d757 876 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 179 778 5.3E-186 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO40_10825 149866faddfbff6cc55a42c138863191 451 TIGRFAM TIGR00115 tig: trigger factor 14 431 7.8E-112 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JO40_10825 149866faddfbff6cc55a42c138863191 451 SUPERFAMILY SSF109998 258 449 3.43E-35 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily JO40_10825 149866faddfbff6cc55a42c138863191 451 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 273 432 1.2E-28 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 JO40_10825 149866faddfbff6cc55a42c138863191 451 SUPERFAMILY SSF54534 139 256 1.55E-20 T 14-10-2018 JO40_10825 149866faddfbff6cc55a42c138863191 451 SUPERFAMILY SSF102735 6 136 1.83E-27 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JO40_10825 149866faddfbff6cc55a42c138863191 451 Gene3D G3DSA:3.10.50.40 157 256 1.2E-69 T 14-10-2018 JO40_10825 149866faddfbff6cc55a42c138863191 451 Gene3D G3DSA:1.10.3120.10 123 436 1.2E-69 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 JO40_10825 149866faddfbff6cc55a42c138863191 451 Hamap MF_00303 Trigger factor [tig]. 3 438 18.794 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JO40_10825 149866faddfbff6cc55a42c138863191 451 Gene3D G3DSA:3.30.70.1050 2 122 3.5E-28 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JO40_10825 149866faddfbff6cc55a42c138863191 451 PIRSF PIRSF003095 3 451 7.1E-109 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JO40_10825 149866faddfbff6cc55a42c138863191 451 Pfam PF05697 Bacterial trigger factor protein (TF) 7 151 1.1E-33 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 JO40_04955 8d1516aa0beac971151111c975daf410 539 Gene3D G3DSA:1.10.3720.10 15 271 9.0E-45 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04955 8d1516aa0beac971151111c975daf410 539 SUPERFAMILY SSF161098 298 532 5.49E-26 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04955 8d1516aa0beac971151111c975daf410 539 Gene3D G3DSA:1.10.3720.10 286 539 1.5E-25 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04955 8d1516aa0beac971151111c975daf410 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 263 1.7E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_04955 8d1516aa0beac971151111c975daf410 539 SUPERFAMILY SSF161098 14 266 4.06E-42 T 14-10-2018 IPR035906 MetI-like superfamily JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 Pfam PF13432 Tetratricopeptide repeat 157 219 6.7E-7 T 14-10-2018 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 Pfam PF13181 Tetratricopeptide repeat 257 286 0.0043 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 Pfam PF13181 Tetratricopeptide repeat 222 253 0.13 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SMART SM00028 322 355 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SMART SM00028 254 287 4.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SMART SM00028 288 321 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SMART SM00028 220 253 0.36 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SMART SM00028 424 457 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SMART SM00028 152 185 6.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SMART SM00028 186 219 0.068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 SUPERFAMILY SSF48452 94 463 1.14E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 Gene3D G3DSA:1.25.40.10 156 232 2.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 Gene3D G3DSA:1.25.40.10 29 155 1.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01880 e168c49b81cd6cc7f4036fea65d69edd 477 Gene3D G3DSA:1.25.40.10 233 463 3.3E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10900 d3e53d284c2a4dc6d7403b1986a0e3a8 553 Gene3D G3DSA:1.25.40.10 357 553 1.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10900 d3e53d284c2a4dc6d7403b1986a0e3a8 553 SUPERFAMILY SSF48452 439 548 2.11E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 SMART SM00382 32 236 3.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 SUPERFAMILY SSF52540 7 247 1.59E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 Gene3D G3DSA:3.40.50.300 275 520 1.7E-37 T 14-10-2018 JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 SUPERFAMILY SSF52540 291 514 4.7E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 Pfam PF00005 ABC transporter 23 189 2.5E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 Pfam PF00005 ABC transporter 293 454 7.3E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03595 7175d06f4525a466c95cc5b6ae4777b6 526 Gene3D G3DSA:3.40.50.300 2 253 4.9E-55 T 14-10-2018 JO40_10985 871e8d6f5c3a03a7181cc7894e3c0200 561 Gene3D G3DSA:3.40.50.300 1 290 1.6E-45 T 14-10-2018 JO40_10985 871e8d6f5c3a03a7181cc7894e3c0200 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 1.2E-185 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JO40_10985 871e8d6f5c3a03a7181cc7894e3c0200 561 Gene3D G3DSA:3.40.50.300 298 558 7.0E-50 T 14-10-2018 JO40_10985 871e8d6f5c3a03a7181cc7894e3c0200 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 515 6.9E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JO40_10985 871e8d6f5c3a03a7181cc7894e3c0200 561 PIRSF PIRSF003128 1 561 7.0E-170 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JO40_10985 871e8d6f5c3a03a7181cc7894e3c0200 561 SUPERFAMILY SSF52540 246 513 1.97E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10985 871e8d6f5c3a03a7181cc7894e3c0200 561 SUPERFAMILY SSF52540 1 219 5.76E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08265 72ba56270c42589b38125789aa910347 595 Gene3D G3DSA:3.90.960.10 240 410 1.7E-229 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO40_08265 72ba56270c42589b38125789aa910347 595 Pfam PF03129 Anticodon binding domain 496 585 1.5E-15 T 14-10-2018 IPR004154 Anticodon-binding JO40_08265 72ba56270c42589b38125789aa910347 595 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 480 3.4E-41 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_08265 72ba56270c42589b38125789aa910347 595 SUPERFAMILY SSF55826 220 410 6.28E-27 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO40_08265 72ba56270c42589b38125789aa910347 595 Pfam PF04073 Aminoacyl-tRNA editing domain 262 400 6.2E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JO40_08265 72ba56270c42589b38125789aa910347 595 Gene3D G3DSA:3.40.50.800 3 570 1.7E-229 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO40_08265 72ba56270c42589b38125789aa910347 595 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 584 1.2E-184 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JO40_08265 72ba56270c42589b38125789aa910347 595 SUPERFAMILY SSF55681 9 499 1.89E-93 T 14-10-2018 JO40_08265 72ba56270c42589b38125789aa910347 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 7.8E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO40_08265 72ba56270c42589b38125789aa910347 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 7.8E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO40_08265 72ba56270c42589b38125789aa910347 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 7.8E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO40_08265 72ba56270c42589b38125789aa910347 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 7.8E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO40_08265 72ba56270c42589b38125789aa910347 595 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 588 38.29 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JO40_08265 72ba56270c42589b38125789aa910347 595 Gene3D G3DSA:3.30.930.10 11 486 1.7E-229 T 14-10-2018 JO40_08265 72ba56270c42589b38125789aa910347 595 SUPERFAMILY SSF52954 484 589 2.57E-26 T 14-10-2018 JO40_04925 47ba4ee9f5067f428b097fa122e20964 132 Gene3D G3DSA:3.40.50.1010 2 126 1.9E-19 T 14-10-2018 JO40_04925 47ba4ee9f5067f428b097fa122e20964 132 SUPERFAMILY SSF88723 4 130 8.97E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 Gene3D G3DSA:3.40.50.300 8 290 5.2E-77 T 14-10-2018 JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 SMART SM00382 353 553 5.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 SMART SM00382 36 241 6.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 SUPERFAMILY SSF52540 315 559 1.42E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 Pfam PF00005 ABC transporter 27 196 3.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 SUPERFAMILY SSF52540 14 241 1.08E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 Pfam PF00005 ABC transporter 345 500 2.7E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 Pfam PF12848 ABC transporter 235 305 6.5E-10 T 14-10-2018 IPR032781 ABC-transporter extension domain JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 Gene3D G3DSA:3.40.50.300 291 580 6.0E-68 T 14-10-2018 JO40_10005 ff5a71a2e3154c53a0387cfeebb44755 582 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 9 580 1.9E-272 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 Gene3D G3DSA:3.40.50.1980 39 181 1.4E-46 T 14-10-2018 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 Gene3D G3DSA:3.40.50.1980 184 314 2.4E-49 T 14-10-2018 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00690 Adhesin family signature 279 298 6.0E-46 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00690 Adhesin family signature 40 58 6.0E-46 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00690 Adhesin family signature 195 216 6.0E-46 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00690 Adhesin family signature 248 266 6.0E-46 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00690 Adhesin family signature 71 84 6.0E-46 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00690 Adhesin family signature 84 101 6.0E-46 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00691 Adhesin B signature 84 103 1.9E-25 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00691 Adhesin B signature 292 310 1.9E-25 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00691 Adhesin B signature 65 83 1.9E-25 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00691 Adhesin B signature 40 61 1.9E-25 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00691 Adhesin B signature 195 212 1.9E-25 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 PRINTS PR00691 Adhesin B signature 271 289 1.9E-25 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 Pfam PF01297 Zinc-uptake complex component A periplasmic 43 310 2.9E-72 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 JO40_13250 bbaf94e626739b2fb2e51c3f26e111fb 315 SUPERFAMILY SSF53807 39 314 1.18E-82 T 14-10-2018 JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Pfam PF00691 OmpA family 1245 1330 5.8E-14 T 14-10-2018 IPR006665 OmpA-like domain JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Gene3D G3DSA:2.60.40.4070 345 445 5.2E-8 T 14-10-2018 JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 SUPERFAMILY SSF103088 1242 1342 2.22E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Gene3D G3DSA:2.60.40.4070 476 554 2.5E-13 T 14-10-2018 JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Gene3D G3DSA:2.60.40.4070 589 661 6.0E-7 T 14-10-2018 JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Gene3D G3DSA:2.60.40.4070 917 984 5.5E-6 T 14-10-2018 JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Pfam PF13750 Bacterial Ig-like domain (group 3) 424 471 0.0057 T 14-10-2018 IPR022038 Bacterial Ig-like domain JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Gene3D G3DSA:3.30.1330.60 1208 1345 7.5E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_12770 cbe5f9a4cb06d82f612ab349502c146c 1345 Pfam PF13860 FlgD Ig-like domain 496 545 8.5E-10 T 14-10-2018 IPR025965 FlgD Ig-like domain JO40_02790 70935996e857d10265c993bac4427ca9 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 141 157 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 JO40_02790 70935996e857d10265c993bac4427ca9 507 SUPERFAMILY SSF48557 4 498 6.83E-201 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JO40_02790 70935996e857d10265c993bac4427ca9 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 504 1.3E-207 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_02790 70935996e857d10265c993bac4427ca9 507 Pfam PF00221 Aromatic amino acid lyase 13 471 4.3E-201 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 JO40_02790 70935996e857d10265c993bac4427ca9 507 Gene3D G3DSA:1.10.275.10 1 199 3.4E-71 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JO40_02790 70935996e857d10265c993bac4427ca9 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 5 504 45.365 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_02790 70935996e857d10265c993bac4427ca9 507 Gene3D G3DSA:1.20.200.10 200 505 1.9E-126 T 14-10-2018 JO40_04890 831116b2356359217f897b409f1bdc0d 518 Gene3D G3DSA:1.20.1560.10 1 299 1.3E-13 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04890 831116b2356359217f897b409f1bdc0d 518 Gene3D G3DSA:3.40.50.300 300 518 1.1E-41 T 14-10-2018 JO40_04890 831116b2356359217f897b409f1bdc0d 518 SUPERFAMILY SSF52540 337 517 2.04E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04890 831116b2356359217f897b409f1bdc0d 518 SUPERFAMILY SSF90123 3 281 1.16E-22 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04890 831116b2356359217f897b409f1bdc0d 518 SMART SM00382 340 518 0.0057 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04890 831116b2356359217f897b409f1bdc0d 518 ProSitePatterns PS00211 ABC transporters family signature. 447 461 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_04890 831116b2356359217f897b409f1bdc0d 518 Pfam PF00005 ABC transporter 334 475 4.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03010 6e86227fa2dc1526eac6627a6303e59f 234 SMART SM00382 34 221 7.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03010 6e86227fa2dc1526eac6627a6303e59f 234 Pfam PF00005 ABC transporter 25 173 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03010 6e86227fa2dc1526eac6627a6303e59f 234 Gene3D G3DSA:3.40.50.300 3 232 1.5E-68 T 14-10-2018 JO40_03010 6e86227fa2dc1526eac6627a6303e59f 234 SUPERFAMILY SSF52540 5 225 1.19E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03010 6e86227fa2dc1526eac6627a6303e59f 234 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_12025 95759c5ebc3322acbc4d29cd437748af 708 SUPERFAMILY SSF51998 154 688 3.05E-155 T 14-10-2018 JO40_12025 95759c5ebc3322acbc4d29cd437748af 708 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 152 683 5.8E-147 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JO40_12025 95759c5ebc3322acbc4d29cd437748af 708 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 153 684 4.3E-175 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JO40_12025 95759c5ebc3322acbc4d29cd437748af 708 Gene3D G3DSA:3.20.70.20 168 690 5.4E-115 T 14-10-2018 JO40_12025 95759c5ebc3322acbc4d29cd437748af 708 Pfam PF03477 ATP cone domain 31 124 1.3E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JO40_11975 f9a793453092b5f10bc2d5095b61ea84 391 Gene3D G3DSA:3.80.30.20 1 287 4.0E-70 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO40_11975 f9a793453092b5f10bc2d5095b61ea84 391 Pfam PF04055 Radical SAM superfamily 8 173 1.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_11975 f9a793453092b5f10bc2d5095b61ea84 391 SMART SM00729 3 223 5.0E-34 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_11975 f9a793453092b5f10bc2d5095b61ea84 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 376 1.1E-65 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 JO40_11975 f9a793453092b5f10bc2d5095b61ea84 391 Pfam PF06969 HemN C-terminal domain 310 374 5.3E-12 T 14-10-2018 IPR010723 HemN, C-terminal JO40_11975 f9a793453092b5f10bc2d5095b61ea84 391 SUPERFAMILY SSF102114 3 384 2.49E-75 T 14-10-2018 JO40_11345 5884552729fb9fe827970a00a7593f5c 285 Gene3D G3DSA:2.60.200.30 116 253 2.9E-77 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO40_11345 5884552729fb9fe827970a00a7593f5c 285 Pfam PF01513 ATP-NAD kinase 47 258 1.5E-53 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO40_11345 5884552729fb9fe827970a00a7593f5c 285 SUPERFAMILY SSF111331 4 277 3.01E-78 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JO40_11345 5884552729fb9fe827970a00a7593f5c 285 Gene3D G3DSA:3.40.50.10330 27 277 2.9E-77 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JO40_11345 5884552729fb9fe827970a00a7593f5c 285 Hamap MF_00361 NAD kinase [nadK]. 3 276 31.197 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO40_07315 8d75cc152d083b039e376cd61086ccb2 383 Gene3D G3DSA:3.90.1150.10 2 372 3.9E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_07315 8d75cc152d083b039e376cd61086ccb2 383 PIRSF PIRSF005572 1 383 5.4E-49 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JO40_07315 8d75cc152d083b039e376cd61086ccb2 383 Gene3D G3DSA:3.40.640.10 16 269 3.9E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_07315 8d75cc152d083b039e376cd61086ccb2 383 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 2 379 1.7E-117 T 14-10-2018 IPR010969 Cysteine desulfurase-related, unknown function JO40_07315 8d75cc152d083b039e376cd61086ccb2 383 Pfam PF00266 Aminotransferase class-V 2 371 2.0E-75 T 14-10-2018 IPR000192 Aminotransferase class V domain JO40_07315 8d75cc152d083b039e376cd61086ccb2 383 SUPERFAMILY SSF53383 1 381 3.99E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_03470 c5da037e7c8ced6b72d2eb62777b6e5c 260 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 118 140 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO40_03470 c5da037e7c8ced6b72d2eb62777b6e5c 260 Pfam PF01066 CDP-alcohol phosphatidyltransferase 72 140 2.2E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO40_03470 c5da037e7c8ced6b72d2eb62777b6e5c 260 Gene3D G3DSA:1.20.120.1760 64 227 4.5E-10 T 14-10-2018 JO40_07300 5182b2672e4cb08a19789c6466088893 419 Gene3D G3DSA:2.40.50.140 2 75 9.6E-20 T 14-10-2018 JO40_07300 5182b2672e4cb08a19789c6466088893 419 Gene3D G3DSA:3.40.50.150 190 410 9.1E-46 T 14-10-2018 JO40_07300 5182b2672e4cb08a19789c6466088893 419 SUPERFAMILY SSF53335 64 410 1.46E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_07300 5182b2672e4cb08a19789c6466088893 419 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 341 372 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site JO40_07300 5182b2672e4cb08a19789c6466088893 419 SUPERFAMILY SSF50249 5 62 1.94E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_07300 5182b2672e4cb08a19789c6466088893 419 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 200 406 1.2E-21 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 JO40_09165 476616e8c1a2e42a454be4e3f07bd238 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 2.7E-45 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_09165 476616e8c1a2e42a454be4e3f07bd238 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 216 1.2E-18 T 14-10-2018 JO40_04490 b9f42b9fce29f51e5ab431599b04dac4 95 Pfam PF04221 RelB antitoxin 4 55 1.6E-8 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_04490 b9f42b9fce29f51e5ab431599b04dac4 95 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 65 5.6E-15 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 168 330 2.5E-65 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 Gene3D G3DSA:3.40.50.720 2 346 3.0E-148 T 14-10-2018 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 SMART SM00846 1 163 1.6E-76 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 2 342 5.2E-130 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 161 168 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 SUPERFAMILY SSF55347 162 330 1.76E-72 T 14-10-2018 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 109 2.4E-33 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 242 259 8.9E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 8.9E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 8.9E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 297 8.9E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 157 175 8.9E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 SUPERFAMILY SSF51735 1 177 1.62E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 Gene3D G3DSA:3.30.360.10 164 334 3.0E-148 T 14-10-2018 JO40_11875 639d9e58933ac92e0fbe2bab82943ca3 349 PIRSF PIRSF000149 1 349 6.5E-128 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_09990 38354aed529e618429d3534da9c6fe5b 470 Gene3D G3DSA:3.60.15.10 8 444 3.2E-141 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_09990 38354aed529e618429d3534da9c6fe5b 470 Pfam PF10996 Beta-Casp domain 257 383 3.1E-24 T 14-10-2018 IPR022712 Beta-Casp domain JO40_09990 38354aed529e618429d3534da9c6fe5b 470 Pfam PF16661 Metallo-beta-lactamase superfamily domain 20 176 6.4E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_09990 38354aed529e618429d3534da9c6fe5b 470 Gene3D G3DSA:3.40.50.10890 225 409 3.2E-141 T 14-10-2018 JO40_09990 38354aed529e618429d3534da9c6fe5b 470 SMART SM00849 15 244 6.3E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_09990 38354aed529e618429d3534da9c6fe5b 470 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 398 458 2.0E-13 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JO40_09990 38354aed529e618429d3534da9c6fe5b 470 SMART SM01027 257 383 9.6E-55 T 14-10-2018 IPR022712 Beta-Casp domain JO40_09990 38354aed529e618429d3534da9c6fe5b 470 SUPERFAMILY SSF56281 3 469 1.07E-119 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_09835 9fcccb3a7ccfbe8ad351e1a6eb032788 341 Gene3D G3DSA:3.90.550.10 1 258 9.8E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09835 9fcccb3a7ccfbe8ad351e1a6eb032788 341 Pfam PF00535 Glycosyl transferase family 2 5 119 1.1E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO40_09835 9fcccb3a7ccfbe8ad351e1a6eb032788 341 SUPERFAMILY SSF53448 3 232 3.75E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_08370 db7db60dea94ff93c4051c805d1b9407 346 SUPERFAMILY SSF52540 15 271 2.83E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08370 db7db60dea94ff93c4051c805d1b9407 346 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 318 2.0E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_08370 db7db60dea94ff93c4051c805d1b9407 346 Pfam PF00005 ABC transporter 46 199 5.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08370 db7db60dea94ff93c4051c805d1b9407 346 Gene3D G3DSA:3.40.50.300 13 346 2.4E-92 T 14-10-2018 JO40_08370 db7db60dea94ff93c4051c805d1b9407 346 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 338 3.9E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_08370 db7db60dea94ff93c4051c805d1b9407 346 SMART SM00382 54 257 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11505 b89138fbce17916746aeffff07d7650f 223 Pfam PF01121 Dephospho-CoA kinase 22 186 8.0E-21 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JO40_11505 b89138fbce17916746aeffff07d7650f 223 Gene3D G3DSA:3.40.50.300 2 222 1.5E-39 T 14-10-2018 JO40_11505 b89138fbce17916746aeffff07d7650f 223 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 20 221 16.299 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JO40_11505 b89138fbce17916746aeffff07d7650f 223 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 22 213 2.9E-23 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JO40_11505 b89138fbce17916746aeffff07d7650f 223 SUPERFAMILY SSF52540 20 220 3.85E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 SMART SM01222 4 181 8.5E-112 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 2 299 8.5E-132 T 14-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 5 180 3.3E-71 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 SUPERFAMILY SSF55116 182 298 2.46E-47 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 Pfam PF02971 Formiminotransferase domain 183 286 2.3E-26 T 14-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 Gene3D G3DSA:3.30.70.670 183 298 3.1E-38 T 14-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 SMART SM01221 182 296 6.6E-76 T 14-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 Gene3D G3DSA:3.30.990.10 2 181 3.6E-67 T 14-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 JO40_03990 075f7b6e98e99c3c95a79a10590195c6 299 SUPERFAMILY SSF55116 4 181 1.23E-69 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 JO40_07795 68be38db61a8f8eda54d738fd4dc3386 287 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 247 1.3E-94 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 JO40_07795 68be38db61a8f8eda54d738fd4dc3386 287 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 287 92.155 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 JO40_07795 68be38db61a8f8eda54d738fd4dc3386 287 SUPERFAMILY SSF52540 1 228 2.5E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07795 68be38db61a8f8eda54d738fd4dc3386 287 Pfam PF13500 AAA domain 3 226 3.0E-21 T 14-10-2018 JO40_07795 68be38db61a8f8eda54d738fd4dc3386 287 Gene3D G3DSA:3.40.50.300 2 243 2.9E-54 T 14-10-2018 JO40_05455 22a1490ad692e6b38df87cc6a3acab46 327 Gene3D G3DSA:3.90.1640.10 17 198 3.5E-27 T 14-10-2018 JO40_05455 22a1490ad692e6b38df87cc6a3acab46 327 Pfam PF02272 DHHA1 domain 187 302 4.5E-13 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JO40_05455 22a1490ad692e6b38df87cc6a3acab46 327 Pfam PF01368 DHH family 18 159 4.1E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_05455 22a1490ad692e6b38df87cc6a3acab46 327 SUPERFAMILY SSF64182 17 298 1.1E-47 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO40_11125 a5d9be779341b433507cee1d3060034d 411 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 234 399 5.2E-28 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain JO40_11125 a5d9be779341b433507cee1d3060034d 411 Gene3D G3DSA:3.40.980.20 226 408 3.9E-24 T 14-10-2018 JO40_11125 a5d9be779341b433507cee1d3060034d 411 Gene3D G3DSA:3.40.50.10840 8 225 3.3E-51 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily JO40_11125 a5d9be779341b433507cee1d3060034d 411 Pfam PF07005 Putative sugar-binding N-terminal domain 9 222 2.4E-44 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain JO40_11125 a5d9be779341b433507cee1d3060034d 411 SUPERFAMILY SSF142764 9 402 4.18E-78 T 14-10-2018 JO40_06790 b4c97ffdaffface1c88aaade301ca6ec 243 Gene3D G3DSA:3.40.1280.10 1 167 5.4E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO40_06790 b4c97ffdaffface1c88aaade301ca6ec 243 PIRSF PIRSF000386 1 243 8.4E-95 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO40_06790 b4c97ffdaffface1c88aaade301ca6ec 243 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 224 8.0E-95 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO40_06790 b4c97ffdaffface1c88aaade301ca6ec 243 SUPERFAMILY SSF75217 1 240 2.39E-91 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO40_06790 b4c97ffdaffface1c88aaade301ca6ec 243 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 217 9.8E-67 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO40_06790 b4c97ffdaffface1c88aaade301ca6ec 243 Gene3D G3DSA:1.10.1270.20 168 243 7.9E-29 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO40_06790 b4c97ffdaffface1c88aaade301ca6ec 243 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 243 98.924 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 Pfam PF00005 ABC transporter 355 503 8.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 Gene3D G3DSA:1.20.1560.10 6 324 5.4E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 Gene3D G3DSA:3.40.50.300 333 552 1.3E-73 T 14-10-2018 JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 SMART SM00382 364 550 4.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 SUPERFAMILY SSF90123 8 322 5.36E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 SUPERFAMILY SSF52540 341 551 3.26E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 Pfam PF00664 ABC transporter transmembrane region 22 290 6.6E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_06755 f4635ab3ccecedcfc968816f4aa7477e 552 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03625 3e738be713d6a97f091c336e01b32223 278 PIRSF PIRSF006816 1 256 2.0E-69 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 JO40_03625 3e738be713d6a97f091c336e01b32223 278 SUPERFAMILY SSF63380 2 92 2.21E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JO40_03625 3e738be713d6a97f091c336e01b32223 278 Gene3D G3DSA:2.40.30.10 1 92 5.5E-20 T 14-10-2018 JO40_03625 3e738be713d6a97f091c336e01b32223 278 SUPERFAMILY SSF52343 89 249 3.54E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO40_03625 3e738be713d6a97f091c336e01b32223 278 Gene3D G3DSA:3.40.50.80 100 204 5.2E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO40_03625 3e738be713d6a97f091c336e01b32223 278 Pfam PF00175 Oxidoreductase NAD-binding domain 105 198 2.3E-7 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JO40_03625 3e738be713d6a97f091c336e01b32223 278 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 213 250 2.4E-14 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain JO40_13270 2b4f56f26677e127553cca346c76131f 227 SMART SM00529 29 128 4.8E-41 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 JO40_13270 2b4f56f26677e127553cca346c76131f 227 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 9 62 6.1E-12 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 JO40_13270 2b4f56f26677e127553cca346c76131f 227 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 68 136 1.0E-27 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 JO40_13270 2b4f56f26677e127553cca346c76131f 227 SUPERFAMILY SSF46785 17 94 4.77E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_13270 2b4f56f26677e127553cca346c76131f 227 Gene3D G3DSA:1.10.10.10 8 142 7.1E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_13270 2b4f56f26677e127553cca346c76131f 227 SUPERFAMILY SSF47979 68 142 3.01E-25 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JO40_03955 accbc9188a055558b4731eb77e451c14 390 Gene3D G3DSA:3.40.50.11890 30 156 4.8E-39 T 14-10-2018 JO40_03955 accbc9188a055558b4731eb77e451c14 390 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 37 382 4.1E-78 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit JO40_03955 accbc9188a055558b4731eb77e451c14 390 Gene3D G3DSA:1.20.1270.370 20 202 4.8E-39 T 14-10-2018 JO40_03955 accbc9188a055558b4731eb77e451c14 390 Gene3D G3DSA:3.40.50.11900 239 389 9.4E-36 T 14-10-2018 JO40_05740 fdd3d8a1ec7cfb3de633b0695bfac75e 139 SUPERFAMILY SSF46785 7 135 9.67E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_05740 fdd3d8a1ec7cfb3de633b0695bfac75e 139 Pfam PF02082 Transcriptional regulator 1 82 1.0E-22 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type JO40_05740 fdd3d8a1ec7cfb3de633b0695bfac75e 139 Gene3D G3DSA:1.10.10.10 1 139 2.8E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_05955 f0e42cb17b771c580d81bf83baae4328 90 PIRSF PIRSF037291 2 89 1.3E-40 T 14-10-2018 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related JO40_05955 f0e42cb17b771c580d81bf83baae4328 90 Gene3D G3DSA:3.40.30.10 1 89 1.5E-12 T 14-10-2018 JO40_05955 f0e42cb17b771c580d81bf83baae4328 90 SUPERFAMILY SSF52833 4 89 9.68E-10 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO40_05955 f0e42cb17b771c580d81bf83baae4328 90 Pfam PF00462 Glutaredoxin 6 72 1.8E-8 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JO40_03940 1884e0aec5cfd44c287cccaa5baebf0d 215 SUPERFAMILY SSF46689 12 72 2.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_03940 1884e0aec5cfd44c287cccaa5baebf0d 215 Gene3D G3DSA:1.10.357.10 1 194 7.5E-27 T 14-10-2018 JO40_03940 1884e0aec5cfd44c287cccaa5baebf0d 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 60 3.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_12245 878c38b27cc5b5a8049eecda0bdf0a94 351 SUPERFAMILY SSF74650 4 349 1.19E-102 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JO40_12245 878c38b27cc5b5a8049eecda0bdf0a94 351 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 JO40_12245 878c38b27cc5b5a8049eecda0bdf0a94 351 Gene3D G3DSA:2.70.98.10 1 351 4.0E-106 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JO40_12245 878c38b27cc5b5a8049eecda0bdf0a94 351 Pfam PF01263 Aldose 1-epimerase 20 346 5.1E-80 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 JO40_12245 878c38b27cc5b5a8049eecda0bdf0a94 351 PIRSF PIRSF005096 1 351 1.1E-128 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 JO40_07985 2a6316d914743d6e98c9916ac2847550 234 SUPERFAMILY SSF53271 26 229 3.67E-39 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_07985 2a6316d914743d6e98c9916ac2847550 234 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 234 23.94 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_07985 2a6316d914743d6e98c9916ac2847550 234 Pfam PF00156 Phosphoribosyl transferase domain 53 159 6.0E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO40_07985 2a6316d914743d6e98c9916ac2847550 234 Gene3D G3DSA:3.40.50.2020 1 232 1.1E-44 T 14-10-2018 JO40_11680 a8f4d2bc28dcc324c2aeca53218a14d2 281 Pfam PF05681 Fumarate hydratase (Fumerase) 10 279 7.0E-116 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 JO40_11680 a8f4d2bc28dcc324c2aeca53218a14d2 281 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 279 4.2E-98 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 JO40_10770 aa29815ab8a358a64793fe442ddbcff4 431 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 71 2.3E-8 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_10770 aa29815ab8a358a64793fe442ddbcff4 431 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 431 45.148 T 14-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_10770 aa29815ab8a358a64793fe442ddbcff4 431 SUPERFAMILY SSF52540 75 334 1.21E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10770 aa29815ab8a358a64793fe442ddbcff4 431 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 319 1.6E-43 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_10770 aa29815ab8a358a64793fe442ddbcff4 431 Gene3D G3DSA:3.40.50.12240 1 431 8.1E-108 T 14-10-2018 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Gene3D G3DSA:1.25.40.10 141 225 7.2E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Pfam PF13414 TPR repeat 164 202 5.9E-9 T 14-10-2018 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Pfam PF13414 TPR repeat 232 270 1.4E-6 T 14-10-2018 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Gene3D G3DSA:1.25.40.10 36 140 9.0E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 89 122 0.0016 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 55 88 0.0061 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 123 156 0.0029 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 259 292 0.054 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 293 326 9.7E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 157 190 6.7E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 225 258 0.033 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SMART SM00028 191 224 0.0046 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Gene3D G3DSA:1.25.40.10 226 370 8.3E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Pfam PF13181 Tetratricopeptide repeat 296 325 0.037 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Pfam PF13181 Tetratricopeptide repeat 56 88 0.0023 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 Pfam PF13181 Tetratricopeptide repeat 124 156 0.0012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_12620 c917894cd425bd361016e342b33d2d01 370 SUPERFAMILY SSF48452 43 338 2.72E-46 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_05755 2a0afaa155ffd9b03df6b3e9b68bff0a 208 Gene3D G3DSA:1.20.1540.10 7 200 9.0E-32 T 14-10-2018 IPR035952 Rhomboid-like superfamily JO40_05755 2a0afaa155ffd9b03df6b3e9b68bff0a 208 Pfam PF01694 Rhomboid family 49 195 1.2E-33 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 JO40_05755 2a0afaa155ffd9b03df6b3e9b68bff0a 208 SMART SM01160 43 136 0.0067 T 14-10-2018 JO40_05755 2a0afaa155ffd9b03df6b3e9b68bff0a 208 SUPERFAMILY SSF144091 12 193 3.66E-38 T 14-10-2018 JO40_03840 10069c5af9b16ba2766c7019c42f6686 262 SUPERFAMILY SSF75217 119 256 6.98E-30 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO40_03840 10069c5af9b16ba2766c7019c42f6686 262 Gene3D G3DSA:3.40.1280.10 103 261 4.5E-33 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO40_03840 10069c5af9b16ba2766c7019c42f6686 262 Pfam PF00588 SpoU rRNA Methylase family 120 252 3.1E-27 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JO40_08835 ff8a0b09f6948dff26a9807f3f1e2395 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 27.922 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 JO40_08835 ff8a0b09f6948dff26a9807f3f1e2395 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 145 6.7E-36 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Gene3D G3DSA:3.40.50.300 1 272 7.6E-54 T 14-10-2018 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Gene3D G3DSA:3.40.50.300 848 1099 6.3E-83 T 14-10-2018 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 SUPERFAMILY SSF52540 280 493 2.91E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Pfam PF00664 ABC transporter transmembrane region 547 803 3.4E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Pfam PF00005 ABC transporter 23 171 6.8E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Pfam PF00005 ABC transporter 308 438 7.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Gene3D G3DSA:1.20.1560.10 509 841 1.5E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 SUPERFAMILY SSF90123 519 838 7.72E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 SMART SM00382 877 1063 4.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 SMART SM00382 312 486 2.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 SMART SM00382 30 229 3.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 SUPERFAMILY SSF52540 845 1086 6.09E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 ProSitePatterns PS00211 ABC transporters family signature. 989 1003 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 SUPERFAMILY SSF52540 2 248 1.92E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Pfam PF00005 ABC transporter 868 1017 7.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_01860 0d8d55c6d5c176c78dd45016ed8481f4 1103 Gene3D G3DSA:3.40.50.300 273 508 7.3E-48 T 14-10-2018 JO40_04430 f62d7963b9e40950d59a96c489294d95 145 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JO40_04430 f62d7963b9e40950d59a96c489294d95 145 TIGRFAM TIGR01753 flav_short: flavodoxin 4 144 5.5E-46 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 JO40_04430 f62d7963b9e40950d59a96c489294d95 145 Pfam PF00258 Flavodoxin 6 137 1.6E-17 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JO40_04430 f62d7963b9e40950d59a96c489294d95 145 SUPERFAMILY SSF52218 3 145 1.59E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_04430 f62d7963b9e40950d59a96c489294d95 145 Gene3D G3DSA:3.40.50.360 4 145 1.4E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_01320 009b3b8849e043733211e521750cf8e3 263 Gene3D G3DSA:3.40.50.150 51 263 1.2E-52 T 14-10-2018 JO40_01320 009b3b8849e043733211e521750cf8e3 263 Pfam PF01189 16S rRNA methyltransferase RsmB/F 65 251 3.3E-36 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 JO40_01320 009b3b8849e043733211e521750cf8e3 263 SUPERFAMILY SSF53335 48 262 4.7E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_01320 009b3b8849e043733211e521750cf8e3 263 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 70 80 2.7E-14 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JO40_01320 009b3b8849e043733211e521750cf8e3 263 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 191 207 2.7E-14 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JO40_01320 009b3b8849e043733211e521750cf8e3 263 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 141 153 2.7E-14 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JO40_07465 47b074286a1caa1d245b9d8e40d0fd33 322 Gene3D G3DSA:2.40.30.170 167 257 1.1E-11 T 14-10-2018 JO40_07465 47b074286a1caa1d245b9d8e40d0fd33 322 SUPERFAMILY SSF111369 55 221 4.84E-11 T 14-10-2018 JO40_07465 47b074286a1caa1d245b9d8e40d0fd33 322 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 219 3.8E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JO40_07465 47b074286a1caa1d245b9d8e40d0fd33 322 Gene3D G3DSA:2.40.420.20 258 317 3.3E-8 T 14-10-2018 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 Gene3D G3DSA:3.40.50.300 1 208 8.5E-77 T 14-10-2018 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 TIGRFAM TIGR01351 adk: adenylate kinase 3 203 1.0E-77 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 Pfam PF05191 Adenylate kinase, active site lid 122 157 1.1E-14 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 SUPERFAMILY SSF52540 2 199 4.18E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 Pfam PF00406 Adenylate kinase 6 185 1.2E-54 T 14-10-2018 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 Hamap MF_00235 Adenylate kinase [adk]. 1 208 45.163 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 PRINTS PR00094 Adenylate kinase signature 32 46 2.4E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 PRINTS PR00094 Adenylate kinase signature 81 97 2.4E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 PRINTS PR00094 Adenylate kinase signature 172 186 2.4E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 PRINTS PR00094 Adenylate kinase signature 155 170 2.4E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO40_08665 f8e19c7ce3834e058eb4c7eb31225d6a 209 PRINTS PR00094 Adenylate kinase signature 4 17 2.4E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO40_05765 9f169320a164da39a43eecf60fe46aee 337 PIRSF PIRSF006621 1 335 1.3E-53 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JO40_05765 9f169320a164da39a43eecf60fe46aee 337 Pfam PF01207 Dihydrouridine synthase (Dus) 6 323 1.8E-46 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JO40_05765 9f169320a164da39a43eecf60fe46aee 337 Gene3D G3DSA:3.20.20.70 1 253 1.2E-57 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_05765 9f169320a164da39a43eecf60fe46aee 337 SUPERFAMILY SSF51395 2 329 7.23E-49 T 14-10-2018 JO40_11095 139ff2e30cff15adc0b4849b01f09e18 342 Gene3D G3DSA:1.10.8.1150 39 111 1.0E-13 T 14-10-2018 JO40_11095 139ff2e30cff15adc0b4849b01f09e18 342 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 8 338 29.953 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JO40_11095 139ff2e30cff15adc0b4849b01f09e18 342 Pfam PF02618 YceG-like family 44 330 3.0E-75 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JO40_11095 139ff2e30cff15adc0b4849b01f09e18 342 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 333 1.0E-81 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JO40_02755 b06469275684a2c8b56d340787aa8242 462 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 272 355 4.9E-17 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain JO40_02755 b06469275684a2c8b56d340787aa8242 462 Gene3D G3DSA:3.30.565.60 191 359 1.7E-43 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily JO40_02755 b06469275684a2c8b56d340787aa8242 462 Pfam PF04326 Putative DNA-binding domain 2 120 5.0E-13 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 JO40_02755 b06469275684a2c8b56d340787aa8242 462 Pfam PF08279 HTH domain 402 445 7.9E-6 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JO40_02755 b06469275684a2c8b56d340787aa8242 462 Gene3D G3DSA:1.10.10.10 383 457 1.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_02755 b06469275684a2c8b56d340787aa8242 462 SUPERFAMILY SSF46785 400 459 9.26E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_05815 898001a83cc4e4e6b3bb42a9560c6385 440 SUPERFAMILY SSF52540 219 407 3.62E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05815 898001a83cc4e4e6b3bb42a9560c6385 440 SMART SM00962 221 421 4.0E-46 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_05815 898001a83cc4e4e6b3bb42a9560c6385 440 Gene3D G3DSA:3.40.50.300 216 409 1.1E-65 T 14-10-2018 JO40_05815 898001a83cc4e4e6b3bb42a9560c6385 440 Gene3D G3DSA:1.20.120.1380 167 412 1.1E-65 T 14-10-2018 JO40_05815 898001a83cc4e4e6b3bb42a9560c6385 440 SMART SM00382 220 374 7.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05815 898001a83cc4e4e6b3bb42a9560c6385 440 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 315 9.0E-58 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 JO40_05815 898001a83cc4e4e6b3bb42a9560c6385 440 Pfam PF00448 SRP54-type protein, GTPase domain 223 419 2.7E-36 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_00205 734bda77d4e8b0a7eca248d6fc88c113 261 SUPERFAMILY SSF161098 58 242 1.21E-19 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00205 734bda77d4e8b0a7eca248d6fc88c113 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 249 9.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_00205 734bda77d4e8b0a7eca248d6fc88c113 261 Gene3D G3DSA:1.10.3720.10 53 257 2.8E-15 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00205 734bda77d4e8b0a7eca248d6fc88c113 261 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 35 2.1E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JO40_07090 3478f2bc5472baedf5c7b3dd71df1e38 169 Gene3D G3DSA:1.20.120.450 1 168 7.8E-57 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO40_07090 3478f2bc5472baedf5c7b3dd71df1e38 169 SUPERFAMILY SSF109854 6 143 2.2E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO40_07090 3478f2bc5472baedf5c7b3dd71df1e38 169 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 2.3E-57 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 JO40_07090 3478f2bc5472baedf5c7b3dd71df1e38 169 PIRSF PIRSF031551 1 169 1.4E-62 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 JO40_13090 11a6b8416ba650c2983df4470c1bb175 1061 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 301 368 9.9E-17 T 14-10-2018 IPR013378 Listeria/Bacterioides repeat JO40_13090 11a6b8416ba650c2983df4470c1bb175 1061 Gene3D G3DSA:3.10.20.660 298 372 3.5E-19 T 14-10-2018 JO40_13090 11a6b8416ba650c2983df4470c1bb175 1061 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 332 371 5.4E-7 T 14-10-2018 IPR013378 Listeria/Bacterioides repeat JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SMART SM00387 508 649 5.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Gene3D G3DSA:1.10.287.560 339 406 3.0E-5 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 339 463 1.2E-30 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 603 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SMART SM01231 338 463 2.6E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SUPERFAMILY SSF55052 188 262 1.41E-13 T 14-10-2018 IPR035891 CheY-binding domain of CheA JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SUPERFAMILY SSF50341 648 781 1.19E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SMART SM00073 9 106 5.8E-30 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Gene3D G3DSA:2.30.30.40 649 777 3.7E-40 T 14-10-2018 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Pfam PF01584 CheW-like domain 653 782 2.2E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SUPERFAMILY SSF55874 465 647 1.44E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Gene3D G3DSA:2.40.50.180 672 736 3.7E-40 T 14-10-2018 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Pfam PF07194 P2 response regulator binding domain 192 264 2.8E-12 T 14-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Gene3D G3DSA:1.20.120.160 5 147 1.4E-37 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 648 4.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Gene3D G3DSA:3.30.565.10 462 648 3.7E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SMART SM00260 641 781 3.7E-49 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 Pfam PF01627 Hpt domain 11 99 2.4E-19 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JO40_11860 1136093e95914ee9df09f496042ee6c7 800 SUPERFAMILY SSF47226 10 130 1.44E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 SUPERFAMILY SSF58104 428 658 3.27E-45 T 14-10-2018 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 SUPERFAMILY SSF58104 341 441 3.92E-9 T 14-10-2018 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 Pfam PF02743 Cache domain 50 282 7.0E-27 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 SMART SM00304 319 373 2.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 4.8E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 541 4.8E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 572 4.8E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 SUPERFAMILY SSF103190 67 194 3.34E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 Pfam PF00672 HAMP domain 320 367 1.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 Gene3D G3DSA:1.20.1480.50 284 378 4.9E-9 T 14-10-2018 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 483 638 2.3E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 SMART SM00283 416 663 4.9E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 Gene3D G3DSA:1.10.287.950 400 705 1.5E-46 T 14-10-2018 JO40_05170 adb80bf8e4e7fc8664660d277f5eab33 706 Gene3D G3DSA:3.30.450.20 152 283 3.3E-20 T 14-10-2018 JO40_12370 420c805ed292c0536979ccb40fdc57ae 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JO40_12370 420c805ed292c0536979ccb40fdc57ae 216 Gene3D G3DSA:1.10.357.10 1 198 9.3E-20 T 14-10-2018 JO40_12370 420c805ed292c0536979ccb40fdc57ae 216 SUPERFAMILY SSF46689 5 70 4.99E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_12370 420c805ed292c0536979ccb40fdc57ae 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 4.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_12370 420c805ed292c0536979ccb40fdc57ae 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 8.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_12370 420c805ed292c0536979ccb40fdc57ae 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 8.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_05165 f3999187670b594ed1bb31d2066a9b6f 261 Pfam PF06182 ABC-2 family transporter protein 41 260 3.7E-39 T 14-10-2018 IPR010390 Protein of unknown function DUF990 JO40_05205 acd4a4960c1fcfc1b6a3512a1c4f1c60 477 SUPERFAMILY SSF51445 24 330 1.19E-89 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_05205 acd4a4960c1fcfc1b6a3512a1c4f1c60 477 Gene3D G3DSA:3.20.20.80 23 335 1.2E-96 T 14-10-2018 JO40_05205 acd4a4960c1fcfc1b6a3512a1c4f1c60 477 Pfam PF01120 Alpha-L-fucosidase 28 330 6.1E-76 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO40_05205 acd4a4960c1fcfc1b6a3512a1c4f1c60 477 SMART SM00812 24 361 2.5E-126 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO40_05205 acd4a4960c1fcfc1b6a3512a1c4f1c60 477 PRINTS PR00741 Glycosyl hydrolase family 29 signature 151 170 8.2E-14 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO40_05205 acd4a4960c1fcfc1b6a3512a1c4f1c60 477 PRINTS PR00741 Glycosyl hydrolase family 29 signature 106 122 8.2E-14 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO40_05205 acd4a4960c1fcfc1b6a3512a1c4f1c60 477 PRINTS PR00741 Glycosyl hydrolase family 29 signature 287 308 8.2E-14 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO40_04945 86f3981f2c6b9e8bb009067628ad914d 431 Pfam PF00534 Glycosyl transferases group 1 226 346 4.9E-18 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO40_04945 86f3981f2c6b9e8bb009067628ad914d 431 Gene3D G3DSA:3.40.50.2000 1 227 1.8E-16 T 14-10-2018 JO40_04945 86f3981f2c6b9e8bb009067628ad914d 431 SUPERFAMILY SSF53756 5 425 1.41E-43 T 14-10-2018 JO40_04945 86f3981f2c6b9e8bb009067628ad914d 431 Gene3D G3DSA:3.40.50.2000 228 426 1.3E-23 T 14-10-2018 JO40_07060 54399bebdad9058b6394148ae05f1fce 515 Gene3D G3DSA:3.90.220.20 66 268 1.1E-23 T 14-10-2018 JO40_07060 54399bebdad9058b6394148ae05f1fce 515 Gene3D G3DSA:3.90.220.20 316 515 8.9E-38 T 14-10-2018 JO40_07060 54399bebdad9058b6394148ae05f1fce 515 SUPERFAMILY SSF116734 75 277 5.23E-31 T 14-10-2018 JO40_07060 54399bebdad9058b6394148ae05f1fce 515 SUPERFAMILY SSF116734 327 512 1.31E-37 T 14-10-2018 JO40_07060 54399bebdad9058b6394148ae05f1fce 515 Pfam PF01420 Type I restriction modification DNA specificity domain 337 512 5.1E-17 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO40_07060 54399bebdad9058b6394148ae05f1fce 515 Pfam PF01420 Type I restriction modification DNA specificity domain 108 248 7.0E-19 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Pfam PF13174 Tetratricopeptide repeat 278 303 0.027 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Gene3D G3DSA:1.25.40.10 35 99 8.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SUPERFAMILY SSF48452 105 311 8.15E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Pfam PF04471 Restriction endonuclease 395 449 1.2E-4 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Gene3D G3DSA:1.25.40.10 100 203 7.6E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Pfam PF13432 Tetratricopeptide repeat 176 232 1.2E-6 T 14-10-2018 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Pfam PF13432 Tetratricopeptide repeat 40 85 1.3E-4 T 14-10-2018 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Pfam PF13181 Tetratricopeptide repeat 139 166 2.5E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SMART SM00028 136 169 0.002 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SMART SM00028 277 310 0.063 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SMART SM00028 238 271 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SMART SM00028 29 62 340.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SMART SM00028 170 203 6.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SMART SM00028 204 237 87.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SMART SM00028 102 135 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 SUPERFAMILY SSF48452 40 89 9.76E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08705 15309c823da655f05e5bfe7a87555c84 457 Gene3D G3DSA:1.25.40.10 204 328 2.4E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_04005 a9252564acfd244ec2827bd3125084f6 210 SUPERFAMILY SSF52540 8 209 1.33E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04005 a9252564acfd244ec2827bd3125084f6 210 Pfam PF00005 ABC transporter 24 163 3.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04005 a9252564acfd244ec2827bd3125084f6 210 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_04005 a9252564acfd244ec2827bd3125084f6 210 SMART SM00382 30 210 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04005 a9252564acfd244ec2827bd3125084f6 210 Gene3D G3DSA:3.40.50.300 2 210 4.2E-60 T 14-10-2018 JO40_01665 bfd2d07dcc0324d4390573975adf4df6 247 SUPERFAMILY SSF53448 9 245 1.25E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_01665 bfd2d07dcc0324d4390573975adf4df6 247 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 126 133 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JO40_01665 bfd2d07dcc0324d4390573975adf4df6 247 Gene3D G3DSA:3.90.550.10 8 246 4.1E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_01665 bfd2d07dcc0324d4390573975adf4df6 247 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 245 1.8E-41 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 Pfam PF13091 PLD-like domain 28 186 8.6E-9 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 Pfam PF00176 SNF2 family N-terminal domain 297 518 4.3E-12 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 Gene3D G3DSA:3.40.50.300 710 928 5.7E-23 T 14-10-2018 JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 SMART SM00487 285 477 3.7E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 Pfam PF00271 Helicase conserved C-terminal domain 791 905 3.8E-14 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 SMART SM00490 814 905 5.6E-11 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 Gene3D G3DSA:3.30.870.10 7 213 7.6E-15 T 14-10-2018 JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 Gene3D G3DSA:3.40.50.10810 286 561 6.7E-24 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily JO40_12345 30b5d4ddeb5c5111650dddacaff519e6 1189 SUPERFAMILY SSF52540 302 908 1.51E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09385 792234ed23f9e4663a0255aefe0dac4f 343 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_09385 792234ed23f9e4663a0255aefe0dac4f 343 Pfam PF00005 ABC transporter 49 192 3.9E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09385 792234ed23f9e4663a0255aefe0dac4f 343 SUPERFAMILY SSF52540 34 256 1.07E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09385 792234ed23f9e4663a0255aefe0dac4f 343 SMART SM00382 57 256 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09385 792234ed23f9e4663a0255aefe0dac4f 343 Gene3D G3DSA:3.40.50.300 2 273 9.1E-46 T 14-10-2018 JO40_11375 841513575f658ec8f55d3c14bd6308b0 443 Pfam PF01554 MatE 24 185 3.2E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_11375 841513575f658ec8f55d3c14bd6308b0 443 Pfam PF01554 MatE 276 402 1.1E-13 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_11375 841513575f658ec8f55d3c14bd6308b0 443 PIRSF PIRSF006603 1 442 2.4E-69 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_02125 dadb07f84021b30692e3016ce80c8156 356 Pfam PF10974 Protein of unknown function (DUF2804) 21 352 5.7E-49 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 JO40_01000 1b2ce5f2b102b9db2725e185207578a7 225 Gene3D G3DSA:3.60.21.10 1 217 7.5E-38 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO40_01000 1b2ce5f2b102b9db2725e185207578a7 225 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 206 1.1E-19 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 JO40_01000 1b2ce5f2b102b9db2725e185207578a7 225 SUPERFAMILY SSF56300 1 212 5.38E-59 T 14-10-2018 JO40_09170 dcedeff6162377a841b0b3031d9db359 709 Gene3D G3DSA:3.40.50.300 39 315 5.4E-41 T 14-10-2018 JO40_09170 dcedeff6162377a841b0b3031d9db359 709 Pfam PF13307 Helicase C-terminal domain 526 687 3.0E-36 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JO40_09170 dcedeff6162377a841b0b3031d9db359 709 Gene3D G3DSA:3.40.50.300 501 705 2.3E-36 T 14-10-2018 JO40_09170 dcedeff6162377a841b0b3031d9db359 709 SMART SM00491 543 674 6.5E-29 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JO40_09170 dcedeff6162377a841b0b3031d9db359 709 SUPERFAMILY SSF52540 61 668 1.85E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07275 f6bc1d0c17f69065d405318dbc2725d2 370 PIRSF PIRSF006268 1 365 5.7E-120 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 JO40_07275 f6bc1d0c17f69065d405318dbc2725d2 370 Pfam PF02424 ApbE family 35 324 7.1E-80 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 JO40_07275 f6bc1d0c17f69065d405318dbc2725d2 370 SUPERFAMILY SSF143631 29 325 1.88E-82 T 14-10-2018 IPR003374 ApbE-like superfamily JO40_07275 f6bc1d0c17f69065d405318dbc2725d2 370 Gene3D G3DSA:3.10.520.20 20 370 3.8E-99 T 14-10-2018 JO40_02750 8ac5557198d0a358a6b1171dcd2b8c31 343 Pfam PF13310 Virulence protein RhuM family 74 325 1.7E-106 T 14-10-2018 IPR011204 Virulence protein RhuM-like JO40_02750 8ac5557198d0a358a6b1171dcd2b8c31 343 PIRSF PIRSF015268 6 342 2.8E-138 T 14-10-2018 IPR011204 Virulence protein RhuM-like JO40_01940 b9b8d837d4f2ecca5f827df313aa889f 190 PIRSF PIRSF006102 1 190 3.0E-58 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JO40_01940 b9b8d837d4f2ecca5f827df313aa889f 190 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.6E-51 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 Gene3D G3DSA:3.40.50.300 1 182 4.1E-41 T 14-10-2018 JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 Hamap MF_00367 GTPase Era [era]. 1 294 30.996 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 Pfam PF07650 KH domain 205 283 8.5E-12 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 SUPERFAMILY SSF54814 178 294 2.62E-30 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 163 8.1E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 Gene3D G3DSA:3.30.300.20 183 294 9.2E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 SUPERFAMILY SSF52540 6 209 1.6E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 277 2.6E-69 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10350 0aa282b05c1a7e09f919c25d168bbc3e 294 Pfam PF01926 50S ribosome-binding GTPase 6 120 7.4E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 Pfam PF02384 N-6 DNA Methylase 357 486 1.7E-7 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 362 378 9.8E-18 T 14-10-2018 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 396 410 9.8E-18 T 14-10-2018 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 562 574 9.8E-18 T 14-10-2018 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 601 625 9.8E-18 T 14-10-2018 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 Gene3D G3DSA:3.40.50.150 323 750 5.4E-58 T 14-10-2018 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 Pfam PF07669 Eco57I restriction-modification methylase 562 673 1.6E-17 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 Gene3D G3DSA:3.90.1570.30 10 160 2.9E-8 T 14-10-2018 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 Pfam PF12950 TaqI-like C-terminal specificity domain 783 943 8.4E-10 T 14-10-2018 IPR025931 TaqI-like C-terminal specificity domain JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 565 571 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_06920 2a595b17d14f6b5c4d27f266a1a96cfd 1017 SUPERFAMILY SSF53335 226 703 2.19E-65 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 59 86 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 SUPERFAMILY SSF53335 27 289 2.5E-65 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 SMART SM00650 43 216 2.1E-55 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 Gene3D G3DSA:1.10.8.100 220 289 2.3E-13 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 27 287 1.3E-73 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 Gene3D G3DSA:3.40.50.150 11 217 6.0E-58 T 14-10-2018 JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 Pfam PF00398 Ribosomal RNA adenine dimethylase 27 276 1.6E-48 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JO40_08390 3b4120b35502fe702d2e4d8b34fa35fa 296 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 27 290 47.738 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 TIGRFAM TIGR00067 glut_race: glutamate racemase 11 252 6.1E-54 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 Gene3D G3DSA:3.40.50.1860 99 212 9.1E-66 T 14-10-2018 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 Pfam PF01177 Asp/Glu/Hydantoin racemase 14 220 9.3E-24 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 SUPERFAMILY SSF53681 10 110 2.75E-27 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 SUPERFAMILY SSF53681 112 259 1.18E-24 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 Gene3D G3DSA:3.40.50.1860 12 235 9.1E-66 T 14-10-2018 JO40_12190 6421a386283db45d1b76b4eceb3e2ecc 272 Hamap MF_00258 Glutamate racemase [murI]. 7 262 27.986 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 SUPERFAMILY SSF53795 141 307 3.97E-38 T 14-10-2018 JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 Gene3D G3DSA:3.40.1390.20 16 138 2.1E-36 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 Pfam PF02603 HPr Serine kinase N terminus 17 136 1.4E-35 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 SUPERFAMILY SSF75138 15 140 1.31E-31 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 Pfam PF07475 HPr Serine kinase C-terminal domain 139 308 8.4E-70 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 18 310 7.4E-111 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 Gene3D G3DSA:3.40.50.300 139 324 3.6E-69 T 14-10-2018 JO40_11015 9e47b33353626df97cbec0ab1f8c2065 329 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 316 39.003 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 JO40_13205 fa178e1dc8c45688ecc87acc26ad203a 341 Gene3D G3DSA:2.30.30.40 270 341 3.6E-5 T 14-10-2018 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 Gene3D G3DSA:3.30.420.40 253 496 8.6E-91 T 14-10-2018 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.638 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 495 2.8E-231 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 7.3E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 Gene3D G3DSA:3.30.420.40 1 252 1.5E-111 T 14-10-2018 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 SUPERFAMILY SSF53067 254 495 3.17E-86 T 14-10-2018 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 PIRSF PIRSF000538 2 496 1.1E-182 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 1.5E-86 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JO40_11205 e333a23e53b9c5c11eb4406969635da9 496 SUPERFAMILY SSF53067 3 254 3.11E-99 T 14-10-2018 JO40_03015 7f21b3cba69d838ed1661693371f803b 263 SUPERFAMILY SSF48371 79 201 3.56E-6 T 14-10-2018 IPR016024 Armadillo-type fold JO40_11480 2b41a5d157beab322e2d3a2b136d9d41 498 SUPERFAMILY SSF100950 232 496 2.33E-55 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO40_11480 2b41a5d157beab322e2d3a2b136d9d41 498 PIRSF PIRSF009451 8 498 2.9E-188 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 JO40_11480 2b41a5d157beab322e2d3a2b136d9d41 498 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 25 498 1.2E-173 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 JO40_11480 2b41a5d157beab322e2d3a2b136d9d41 498 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 498 1.5E-159 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 JO40_11480 2b41a5d157beab322e2d3a2b136d9d41 498 Gene3D G3DSA:3.40.1080.10 3 228 1.4E-78 T 14-10-2018 JO40_11480 2b41a5d157beab322e2d3a2b136d9d41 498 Gene3D G3DSA:3.40.1080.10 230 498 8.3E-116 T 14-10-2018 JO40_11480 2b41a5d157beab322e2d3a2b136d9d41 498 SUPERFAMILY SSF100950 12 229 1.47E-60 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO40_06945 757a510838433b3a129133f3b0aa3d4c 582 Pfam PF13365 Trypsin-like peptidase domain 68 206 1.1E-14 T 14-10-2018 JO40_06945 757a510838433b3a129133f3b0aa3d4c 582 Gene3D G3DSA:2.40.10.10 16 138 1.0E-9 T 14-10-2018 JO40_06945 757a510838433b3a129133f3b0aa3d4c 582 Gene3D G3DSA:2.40.10.10 142 248 6.2E-15 T 14-10-2018 JO40_06945 757a510838433b3a129133f3b0aa3d4c 582 PRINTS PR00834 HtrA/DegQ protease family signature 106 126 8.3E-5 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_06945 757a510838433b3a129133f3b0aa3d4c 582 PRINTS PR00834 HtrA/DegQ protease family signature 80 92 8.3E-5 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_06945 757a510838433b3a129133f3b0aa3d4c 582 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 8.3E-5 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_06945 757a510838433b3a129133f3b0aa3d4c 582 SUPERFAMILY SSF50494 52 246 3.2E-27 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO40_05385 3b80e518edb3cb99345ccd5ebe7c56d1 204 SUPERFAMILY SSF56925 49 203 7.06E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JO40_05385 3b80e518edb3cb99345ccd5ebe7c56d1 204 ProDom PD155205 TRANSMEMBRANE MEMBRANE TP0733 TP0126 19 203 2.0E-95 T 14-10-2018 JO40_10330 dd2c3509baf74e8d15e8131eda66ae2a 112 Gene3D G3DSA:2.30.30.110 2 112 3.2E-39 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JO40_10330 dd2c3509baf74e8d15e8131eda66ae2a 112 SUPERFAMILY SSF50118 5 111 4.58E-30 T 14-10-2018 JO40_10330 dd2c3509baf74e8d15e8131eda66ae2a 112 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 110 1.9E-20 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JO40_08885 cdb15c9ec6221d1145164364a4246419 117 SUPERFAMILY SSF54427 3 115 1.88E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily JO40_08885 cdb15c9ec6221d1145164364a4246419 117 Gene3D G3DSA:3.10.450.50 2 116 5.2E-24 T 14-10-2018 JO40_06300 5369225599a43b947b8866a5414d406e 338 SMART SM00729 81 280 0.0051 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_06300 5369225599a43b947b8866a5414d406e 338 Pfam PF04055 Radical SAM superfamily 87 237 7.3E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_06300 5369225599a43b947b8866a5414d406e 338 Gene3D G3DSA:3.20.20.70 19 305 1.6E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_06300 5369225599a43b947b8866a5414d406e 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 19 297 4.6E-62 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase JO40_06300 5369225599a43b947b8866a5414d406e 338 SUPERFAMILY SSF102114 77 309 2.35E-28 T 14-10-2018 JO40_06300 5369225599a43b947b8866a5414d406e 338 PIRSF PIRSF004911 2 333 4.2E-101 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase JO40_06300 5369225599a43b947b8866a5414d406e 338 Pfam PF13353 4Fe-4S single cluster domain 85 158 4.0E-5 T 14-10-2018 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 9 579 33.4 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 110 161 2.4E-10 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 SUPERFAMILY SSF55681 185 472 5.57E-92 T 14-10-2018 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 264 474 5.4E-43 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 SUPERFAMILY SSF55186 10 183 4.97E-55 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 SMART SM00863 110 161 7.3E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Pfam PF03129 Anticodon binding domain 487 575 8.6E-19 T 14-10-2018 IPR004154 Anticodon-binding JO40_08440 d718873c35279be99ab1c873e6c983a4 585 SUPERFAMILY SSF52954 476 579 3.93E-28 T 14-10-2018 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Gene3D G3DSA:3.40.50.800 478 583 2.4E-27 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO40_08440 d718873c35279be99ab1c873e6c983a4 585 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 15 576 5.7E-208 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 408 436 9.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 453 466 9.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 271 299 9.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 304 327 9.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 480 492 9.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Gene3D G3DSA:3.30.54.20 73 127 1.9E-62 T 14-10-2018 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Gene3D G3DSA:3.30.980.10 12 164 1.9E-62 T 14-10-2018 JO40_08440 d718873c35279be99ab1c873e6c983a4 585 Gene3D G3DSA:3.30.930.10 165 477 1.4E-124 T 14-10-2018 JO40_06650 108e240ddb706fd230fe32e66c5f6821 309 SUPERFAMILY SSF52540 7 295 4.18E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06650 108e240ddb706fd230fe32e66c5f6821 309 Gene3D G3DSA:1.10.8.80 219 309 3.1E-25 T 14-10-2018 JO40_06650 108e240ddb706fd230fe32e66c5f6821 309 SMART SM00382 30 177 2.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06650 108e240ddb706fd230fe32e66c5f6821 309 Gene3D G3DSA:3.40.50.300 4 174 7.8E-47 T 14-10-2018 JO40_06650 108e240ddb706fd230fe32e66c5f6821 309 Pfam PF07728 AAA domain (dynein-related subfamily) 34 167 2.4E-11 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JO40_02635 89a0c59aa14f9a646abac12d98a0dbb2 252 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 242 1.5E-66 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 JO40_02635 89a0c59aa14f9a646abac12d98a0dbb2 252 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 230 2.0E-44 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 SMART SM01134 73 236 1.9E-54 T 14-10-2018 JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 Gene3D G3DSA:1.10.10.10 1 55 3.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 SMART SM00420 6 58 2.1E-19 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 3.4E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.0E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.0E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 SUPERFAMILY SSF100950 75 236 1.3E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 SUPERFAMILY SSF46785 4 76 5.91E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_11145 9707ab4fbe0b04874539628d25cf5b81 257 Pfam PF00455 DeoR C terminal sensor domain 77 235 1.9E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain JO40_09485 d346c0f5a19cf090bf3675a2936bb5d6 623 SUPERFAMILY SSF50249 190 562 8.57E-76 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_09485 d346c0f5a19cf090bf3675a2936bb5d6 623 Pfam PF00773 RNB domain 244 457 1.1E-37 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JO40_09485 d346c0f5a19cf090bf3675a2936bb5d6 623 SUPERFAMILY SSF50249 564 621 4.97E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_09485 d346c0f5a19cf090bf3675a2936bb5d6 623 Gene3D G3DSA:1.10.10.10 168 235 3.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_09485 d346c0f5a19cf090bf3675a2936bb5d6 623 SMART SM00955 243 520 1.5E-63 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JO40_09485 d346c0f5a19cf090bf3675a2936bb5d6 623 Pfam PF00773 RNB domain 473 518 1.0E-8 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JO40_01785 0ec23e9b38ae32ab9ebc4f4ad23845dc 312 Pfam PF14559 Tetratricopeptide repeat 136 187 4.2E-6 T 14-10-2018 JO40_01785 0ec23e9b38ae32ab9ebc4f4ad23845dc 312 SMART SM00028 122 155 9.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01785 0ec23e9b38ae32ab9ebc4f4ad23845dc 312 SMART SM00028 156 189 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01785 0ec23e9b38ae32ab9ebc4f4ad23845dc 312 SUPERFAMILY SSF48452 104 194 2.19E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01785 0ec23e9b38ae32ab9ebc4f4ad23845dc 312 Gene3D G3DSA:1.25.40.10 2 311 1.1E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 Pfam PF00117 Glutamine amidotransferase class-I 303 528 6.1E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 Gene3D G3DSA:3.40.50.880 286 533 2.4E-103 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 Pfam PF06418 CTP synthase N-terminus 4 268 1.3E-117 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 Gene3D G3DSA:3.40.50.300 1 285 1.0E-126 T 14-10-2018 JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 4.4E-232 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 SUPERFAMILY SSF52540 3 272 1.51E-116 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 Hamap MF_01227 CTP synthase [pyrG]. 3 533 49.007 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JO40_01765 35f2488d4e96879b23c61d6984c31e9a 533 SUPERFAMILY SSF52317 290 532 2.21E-79 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_07625 adc4b194a7895c9e4537648f8c0ece49 404 Gene3D G3DSA:3.90.1580.10 96 404 2.3E-56 T 14-10-2018 JO40_07625 adc4b194a7895c9e4537648f8c0ece49 404 Pfam PF03781 Sulfatase-modifying factor enzyme 1 103 254 5.9E-19 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO40_07625 adc4b194a7895c9e4537648f8c0ece49 404 Pfam PF03781 Sulfatase-modifying factor enzyme 1 297 401 1.1E-12 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO40_07625 adc4b194a7895c9e4537648f8c0ece49 404 SUPERFAMILY SSF56436 102 402 4.24E-34 T 14-10-2018 IPR016187 C-type lectin fold JO40_07075 2972d02a75ab2f84dbe157b5cdf854c5 152 SUPERFAMILY SSF116734 15 150 1.46E-23 T 14-10-2018 JO40_07075 2972d02a75ab2f84dbe157b5cdf854c5 152 Pfam PF01420 Type I restriction modification DNA specificity domain 40 150 3.0E-8 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO40_07075 2972d02a75ab2f84dbe157b5cdf854c5 152 Gene3D G3DSA:3.90.220.20 13 149 1.1E-32 T 14-10-2018 JO40_01675 7753a7a3da7ca8192b5e913dec207298 1079 SUPERFAMILY SSF58113 140 317 2.75E-6 T 14-10-2018 JO40_01675 7753a7a3da7ca8192b5e913dec207298 1079 SUPERFAMILY SSF58113 557 695 1.83E-6 T 14-10-2018 JO40_01675 7753a7a3da7ca8192b5e913dec207298 1079 Gene3D G3DSA:1.20.120.20 216 387 1.3E-6 T 14-10-2018 JO40_01675 7753a7a3da7ca8192b5e913dec207298 1079 Gene3D G3DSA:1.20.120.20 509 669 9.3E-8 T 14-10-2018 JO40_08005 0b227b7988ee1dd565069bf2de92558e 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 262 1.8E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO40_08005 0b227b7988ee1dd565069bf2de92558e 264 SUPERFAMILY SSF117143 94 224 2.22E-31 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JO40_08005 0b227b7988ee1dd565069bf2de92558e 264 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO40_08005 0b227b7988ee1dd565069bf2de92558e 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 150 245 2.6E-28 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO40_08005 0b227b7988ee1dd565069bf2de92558e 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.5E-46 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO40_08005 0b227b7988ee1dd565069bf2de92558e 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO40_08005 0b227b7988ee1dd565069bf2de92558e 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 2.2E-115 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 JO40_10260 165611bd681926b30170aabe61934c05 106 Gene3D G3DSA:3.30.2310.20 1 100 5.3E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_10260 165611bd681926b30170aabe61934c05 106 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 96 1.1E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO40_10260 165611bd681926b30170aabe61934c05 106 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 90 2.3E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 Pfam PF04055 Radical SAM superfamily 188 353 5.8E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 SUPERFAMILY SSF102114 183 404 2.62E-51 T 14-10-2018 JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 Gene3D G3DSA:3.80.30.20 181 408 4.6E-69 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 186 206 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 Pfam PF00919 Uncharacterized protein family UPF0004 7 104 4.4E-18 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 9 444 5.7E-128 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 Gene3D G3DSA:3.40.50.12160 5 141 5.5E-17 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 441 5.2E-83 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 JO40_10415 ef3c306a00d7bb0ead6a33a2ffdbfa31 468 SMART SM00729 182 395 3.7E-46 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_02715 0ee2f9a57ac034328bfb3d574eb4287d 324 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 315 4.7E-31 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JO40_02715 0ee2f9a57ac034328bfb3d574eb4287d 324 PIRSF PIRSF000446 1 324 5.6E-72 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 JO40_02715 0ee2f9a57ac034328bfb3d574eb4287d 324 SUPERFAMILY SSF55048 138 205 1.96E-12 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JO40_02715 0ee2f9a57ac034328bfb3d574eb4287d 324 Gene3D G3DSA:3.30.70.250 122 206 6.9E-80 T 14-10-2018 JO40_02715 0ee2f9a57ac034328bfb3d574eb4287d 324 SUPERFAMILY SSF52151 4 301 5.49E-58 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JO40_02715 0ee2f9a57ac034328bfb3d574eb4287d 324 Pfam PF00698 Acyl transferase domain 4 268 3.5E-29 T 14-10-2018 IPR014043 Acyl transferase JO40_02715 0ee2f9a57ac034328bfb3d574eb4287d 324 Gene3D G3DSA:3.40.366.10 5 298 6.9E-80 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JO40_09570 b8ef52beefc92b9041cbc1e35e3eeb22 305 Pfam PF00849 RNA pseudouridylate synthase 96 230 1.7E-23 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_09570 b8ef52beefc92b9041cbc1e35e3eeb22 305 Gene3D G3DSA:3.10.290.10 5 69 2.7E-13 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO40_09570 b8ef52beefc92b9041cbc1e35e3eeb22 305 Pfam PF01479 S4 domain 17 63 4.7E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_09570 b8ef52beefc92b9041cbc1e35e3eeb22 305 SUPERFAMILY SSF55120 84 293 4.32E-37 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_09570 b8ef52beefc92b9041cbc1e35e3eeb22 305 SMART SM00363 17 122 0.0021 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_09570 b8ef52beefc92b9041cbc1e35e3eeb22 305 SUPERFAMILY SSF55174 17 67 7.85E-7 T 14-10-2018 JO40_09570 b8ef52beefc92b9041cbc1e35e3eeb22 305 Gene3D G3DSA:3.30.2350.10 88 297 6.7E-38 T 14-10-2018 JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 Hamap MF_00282 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 515 35.141 T 14-10-2018 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 Gene3D G3DSA:3.30.930.10 215 515 1.5E-83 T 14-10-2018 JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 Pfam PF01409 tRNA synthetases class II core domain (F) 243 510 4.0E-76 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 SUPERFAMILY SSF55681 243 512 4.11E-55 T 14-10-2018 JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 Gene3D G3DSA:1.10.10.10 81 134 2.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 SUPERFAMILY SSF46785 83 133 9.56E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 216 509 5.1E-100 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO40_03570 fd101ecda101a8a52048c1615e0d448c 515 Gene3D G3DSA:1.10.10.10 12 80 1.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_01935 da0c1efe376771440d047de548e03c75 269 SUPERFAMILY SSF53335 10 239 2.16E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_01935 da0c1efe376771440d047de548e03c75 269 Pfam PF04072 Leucine carboxyl methyltransferase 14 171 3.1E-14 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JO40_01935 da0c1efe376771440d047de548e03c75 269 PIRSF PIRSF028177 1 268 3.2E-55 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 JO40_01935 da0c1efe376771440d047de548e03c75 269 Gene3D G3DSA:3.40.50.150 2 243 1.2E-30 T 14-10-2018 JO40_00350 6d8df15f438dc78714002722eeed2fc5 441 Pfam PF03553 Na+/H+ antiporter family 244 430 1.4E-12 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JO40_00350 6d8df15f438dc78714002722eeed2fc5 441 Pfam PF03553 Na+/H+ antiporter family 26 222 1.5E-20 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 Gene3D G3DSA:3.40.50.720 147 328 1.8E-128 T 14-10-2018 JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 Gene3D G3DSA:3.40.50.720 3 373 1.8E-128 T 14-10-2018 JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 SMART SM01002 156 321 1.6E-55 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 SUPERFAMILY SSF51735 147 327 3.18E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 147 1.6E-44 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 152 377 1.5E-60 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 SUPERFAMILY SSF52283 1 178 2.64E-47 T 14-10-2018 JO40_00025 e87396142bfa287ebf9a6ea8e23e1dec 385 SMART SM01003 4 147 9.2E-58 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JO40_03995 71da330523313b2608df7cacc9078e70 336 SUPERFAMILY SSF53850 32 335 7.25E-59 T 14-10-2018 JO40_03995 71da330523313b2608df7cacc9078e70 336 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 32 313 9.0E-72 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 JO40_03995 71da330523313b2608df7cacc9078e70 336 Gene3D G3DSA:3.40.190.10 35 310 3.0E-89 T 14-10-2018 JO40_03995 71da330523313b2608df7cacc9078e70 336 Gene3D G3DSA:3.40.190.10 135 331 3.0E-89 T 14-10-2018 JO40_03995 71da330523313b2608df7cacc9078e70 336 Pfam PF13343 Bacterial extracellular solute-binding protein 84 318 1.2E-25 T 14-10-2018 JO40_03390 662e7f8405173d7c907fbdde9ae2408c 331 Gene3D G3DSA:3.30.930.10 1 243 6.5E-74 T 14-10-2018 JO40_03390 662e7f8405173d7c907fbdde9ae2408c 331 SUPERFAMILY SSF82649 245 330 1.52E-23 T 14-10-2018 JO40_03390 662e7f8405173d7c907fbdde9ae2408c 331 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 6 323 3.2E-93 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 JO40_03390 662e7f8405173d7c907fbdde9ae2408c 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 153 5.1E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JO40_03390 662e7f8405173d7c907fbdde9ae2408c 331 Gene3D G3DSA:3.30.390.50 244 330 1.8E-27 T 14-10-2018 JO40_03390 662e7f8405173d7c907fbdde9ae2408c 331 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 245 328 1.9E-26 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 JO40_03390 662e7f8405173d7c907fbdde9ae2408c 331 SUPERFAMILY SSF55681 1 243 4.4E-72 T 14-10-2018 JO40_00700 cef921fd1427c81522cda222e03933ff 602 SUPERFAMILY SSF118116 425 601 6.15E-28 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily JO40_00700 cef921fd1427c81522cda222e03933ff 602 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 6 303 4.6E-86 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 JO40_00700 cef921fd1427c81522cda222e03933ff 602 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 120 1.8E-10 T 14-10-2018 JO40_00700 cef921fd1427c81522cda222e03933ff 602 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 5 599 22.122 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 JO40_00700 cef921fd1427c81522cda222e03933ff 602 Gene3D G3DSA:2.30.42.20 428 601 3.0E-37 T 14-10-2018 JO40_00700 cef921fd1427c81522cda222e03933ff 602 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 220 324 3.8E-23 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 JO40_00700 cef921fd1427c81522cda222e03933ff 602 SUPERFAMILY SSF55874 5 207 7.6E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_00700 cef921fd1427c81522cda222e03933ff 602 Pfam PF08676 MutL C terminal dimerisation domain 426 558 1.0E-26 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JO40_00700 cef921fd1427c81522cda222e03933ff 602 Gene3D G3DSA:3.30.1370.100 467 557 3.0E-37 T 14-10-2018 JO40_00700 cef921fd1427c81522cda222e03933ff 602 SMART SM00853 427 560 4.6E-24 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JO40_00700 cef921fd1427c81522cda222e03933ff 602 SMART SM01340 207 325 2.0E-24 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 JO40_00700 cef921fd1427c81522cda222e03933ff 602 Gene3D G3DSA:3.30.230.10 214 323 8.0E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_00700 cef921fd1427c81522cda222e03933ff 602 SUPERFAMILY SSF54211 189 325 3.57E-22 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_00700 cef921fd1427c81522cda222e03933ff 602 Gene3D G3DSA:3.30.565.10 6 207 5.5E-57 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_00700 cef921fd1427c81522cda222e03933ff 602 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 97 103 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 172 1.5E-42 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 SUPERFAMILY SSF48179 193 355 2.55E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 PIRSF PIRSF000114 1 357 5.4E-104 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 186 210 2.6E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 216 240 2.6E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 146 166 2.6E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 257 274 2.6E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 2.6E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 2.6E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 SUPERFAMILY SSF51735 4 191 3.11E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 201 222 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 350 28.642 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 Gene3D G3DSA:3.40.50.720 1 200 2.4E-49 T 14-10-2018 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 193 348 1.6E-40 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO40_07685 2a11d12374204b9d2677f002e5a8fccb 357 Gene3D G3DSA:1.10.1040.10 202 357 1.4E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 SUPERFAMILY SSF52540 8 483 1.28E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 Gene3D G3DSA:3.40.50.300 6 135 1.3E-32 T 14-10-2018 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 5 485 41.049 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 102 2.2E-5 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 Gene3D G3DSA:1.10.8.60 377 482 9.4E-38 T 14-10-2018 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 Gene3D G3DSA:1.10.8.10 263 288 1.1E-24 T 14-10-2018 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 SMART SM01086 377 473 6.5E-18 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 Pfam PF07724 AAA domain (Cdc48 subfamily) 231 370 1.2E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 8 485 8.1E-189 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 Gene3D G3DSA:3.40.50.300 255 352 1.1E-24 T 14-10-2018 JO40_13325 5bd8f5655c68489f38a311ae24b97ffd 485 SMART SM00382 53 374 2.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 2.7E-27 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 SUPERFAMILY SSF55979 1 119 3.89E-20 T 14-10-2018 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 SUPERFAMILY SSF55979 245 365 3.1E-30 T 14-10-2018 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.8E-105 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 Gene3D G3DSA:3.70.10.10 138 364 5.6E-110 T 14-10-2018 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 Gene3D G3DSA:3.10.150.10 1 242 5.6E-110 T 14-10-2018 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 2.3E-24 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 SUPERFAMILY SSF55979 127 244 4.16E-25 T 14-10-2018 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 SMART SM00480 17 362 1.0E-113 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 1.2E-26 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JO40_04455 3c7683e0d433c02a7ff58fbe4188310e 367 PIRSF PIRSF000804 1 367 2.7E-111 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 Gene3D G3DSA:1.10.240.10 197 323 1.8E-99 T 14-10-2018 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 Gene3D G3DSA:3.40.50.620 5 350 1.8E-99 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_11330 0f69d6c698f0873f964799b570d54a80 364 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.3E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 159 180 1.3E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 213 223 1.3E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 1.3E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 SUPERFAMILY SSF52374 4 355 2.75E-75 T 14-10-2018 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 Pfam PF00579 tRNA synthetases class I (W and Y) 3 310 8.0E-53 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_11330 0f69d6c698f0873f964799b570d54a80 364 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 353 2.8E-67 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 SUPERFAMILY SSF52540 317 525 3.7E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 SUPERFAMILY SSF90123 1 292 1.57E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 Pfam PF00005 ABC transporter 338 481 2.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 Gene3D G3DSA:1.20.1560.10 1 313 2.7E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 Pfam PF00664 ABC transporter transmembrane region 11 282 1.1E-29 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 SMART SM00382 347 529 3.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08080 4a21a0a7c01ff11cd2657691ce04a17b 537 Gene3D G3DSA:3.40.50.300 319 535 1.5E-47 T 14-10-2018 JO40_00890 4a5c317b5707f4df996cba5223813ad9 288 SUPERFAMILY SSF161098 92 281 3.14E-24 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00890 4a5c317b5707f4df996cba5223813ad9 288 Gene3D G3DSA:1.10.3720.10 86 287 6.9E-25 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00890 4a5c317b5707f4df996cba5223813ad9 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 285 4.6E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 ProSitePatterns PS00164 Enolase signature. 338 351 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 SMART SM01192 139 429 3.2E-214 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 427 1.4E-133 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-60 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 Hamap MF_00318 Enolase [eno]. 2 415 44.788 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 SUPERFAMILY SSF51604 139 430 1.02E-127 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 PIRSF PIRSF001400 1 429 7.5E-192 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 Gene3D G3DSA:3.30.390.10 1 127 8.1E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 SMART SM01193 4 134 3.3E-93 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 SUPERFAMILY SSF54826 4 137 5.14E-57 T 14-10-2018 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 Gene3D G3DSA:3.20.20.120 128 433 9.4E-139 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 429 1.0E-215 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 PRINTS PR00148 Enolase signature 161 174 2.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 PRINTS PR00148 Enolase signature 338 352 2.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 PRINTS PR00148 Enolase signature 37 51 2.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 PRINTS PR00148 Enolase signature 367 384 2.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 PRINTS PR00148 Enolase signature 315 326 2.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01310 9d54c3b60ec8e191ae04b37d6d04790f 433 PRINTS PR00148 Enolase signature 107 123 2.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 SUPERFAMILY SSF64182 357 580 3.84E-43 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 703 2.0E-175 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 Pfam PF01368 DHH family 77 178 3.0E-10 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 Gene3D G3DSA:3.10.310.30 460 582 1.9E-21 T 14-10-2018 JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 SUPERFAMILY SSF64182 52 207 7.85E-47 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 Pfam PF02272 DHHA1 domain 455 577 8.9E-14 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 Gene3D G3DSA:3.90.1640.30 53 250 3.6E-51 T 14-10-2018 JO40_01435 f5f908e498da047e38ccd14afd8b08c3 707 Gene3D G3DSA:3.90.1640.30 322 457 1.0E-26 T 14-10-2018 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 673 8.8E-238 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 328 1.7E-134 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 SMART SM00861 354 525 2.4E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 SUPERFAMILY SSF52922 538 674 1.57E-25 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 SUPERFAMILY SSF52518 344 527 3.05E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 Gene3D G3DSA:3.40.50.920 540 675 3.8E-27 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 SUPERFAMILY SSF52518 4 321 4.29E-102 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 Gene3D G3DSA:3.40.50.970 2 331 3.4E-113 T 14-10-2018 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 Gene3D G3DSA:3.40.50.970 332 532 1.1E-73 T 14-10-2018 JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 Pfam PF02779 Transketolase, pyrimidine binding domain 353 524 4.5E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO40_10925 e50f0c6f7625ee25ed9ca7b526e123a8 675 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO40_05260 39c66cd499651b8420e223f069fc6130 409 Gene3D G3DSA:3.40.50.300 2 185 1.3E-14 T 14-10-2018 JO40_05260 39c66cd499651b8420e223f069fc6130 409 Gene3D G3DSA:3.40.50.300 186 328 1.1E-6 T 14-10-2018 JO40_05260 39c66cd499651b8420e223f069fc6130 409 SUPERFAMILY SSF52540 5 312 1.77E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05260 39c66cd499651b8420e223f069fc6130 409 Pfam PF07728 AAA domain (dynein-related subfamily) 228 312 6.1E-6 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JO40_05260 39c66cd499651b8420e223f069fc6130 409 Pfam PF07728 AAA domain (dynein-related subfamily) 18 85 1.3E-8 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JO40_05260 39c66cd499651b8420e223f069fc6130 409 SMART SM00382 15 318 3.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_13030 155f4245e2fba9f7b746547e9bfbfd57 253 SUPERFAMILY SSF51658 10 248 3.27E-28 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily JO40_13030 155f4245e2fba9f7b746547e9bfbfd57 253 Gene3D G3DSA:3.20.20.150 8 252 1.0E-30 T 14-10-2018 JO40_13030 155f4245e2fba9f7b746547e9bfbfd57 253 Pfam PF01261 Xylose isomerase-like TIM barrel 76 211 7.9E-10 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JO40_11960 134a72e481e52c802c0c36de26540b65 143 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 132 6.6E-36 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JO40_11960 134a72e481e52c802c0c36de26540b65 143 Gene3D G3DSA:3.40.50.300 1 142 1.6E-42 T 14-10-2018 JO40_11960 134a72e481e52c802c0c36de26540b65 143 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 131 1.1E-37 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JO40_11960 134a72e481e52c802c0c36de26540b65 143 SUPERFAMILY SSF52540 16 122 1.55E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 SUPERFAMILY SSF46906 69 142 1.83E-24 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 142 1.7E-60 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 68 3.4E-28 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 143 29.557 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 SUPERFAMILY SSF54747 3 86 9.68E-28 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 39 75 7.0E-15 T 14-10-2018 JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 SMART SM00649 10 142 5.3E-79 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 Gene3D G3DSA:3.30.1550.10 3 73 4.7E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 2.6E-21 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_00780 2be2ed91811dd0b502431d77a78e38bd 143 Gene3D G3DSA:1.10.10.250 74 142 8.3E-26 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JO40_01240 cdea39199614793870b27ff6c3520500 263 Pfam PF00561 alpha/beta hydrolase fold 25 130 4.0E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_01240 cdea39199614793870b27ff6c3520500 263 Gene3D G3DSA:3.40.50.1820 2 262 8.3E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_01240 cdea39199614793870b27ff6c3520500 263 SUPERFAMILY SSF53474 3 252 2.89E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_01240 cdea39199614793870b27ff6c3520500 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 4.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_01240 cdea39199614793870b27ff6c3520500 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 4.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_01240 cdea39199614793870b27ff6c3520500 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 4.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_06685 67ece7556b12438c9fa474444a3ec2b0 491 Pfam PF03553 Na+/H+ antiporter family 15 213 1.1E-13 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JO40_06925 6f444be3ff54c68e230d1658b4c43967 290 PIRSF PIRSF006483 3 288 5.8E-67 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT JO40_06925 6f444be3ff54c68e230d1658b4c43967 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 228 282 2.0E-16 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 JO40_06925 6f444be3ff54c68e230d1658b4c43967 290 Gene3D G3DSA:3.30.70.120 202 275 4.2E-13 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JO40_06925 6f444be3ff54c68e230d1658b4c43967 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 17 223 4.5E-58 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT JO40_06850 8f115f391927f97f20e27d63889ec42e 414 SUPERFAMILY SSF52540 17 281 4.3E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06850 8f115f391927f97f20e27d63889ec42e 414 Hamap MF_00268 Protein RecA [recA]. 17 343 50.769 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 SUPERFAMILY SSF54752 284 339 6.93E-19 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JO40_06850 8f115f391927f97f20e27d63889ec42e 414 PRINTS PR00142 RecA protein signature 106 135 6.8E-81 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 PRINTS PR00142 RecA protein signature 140 169 6.8E-81 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 PRINTS PR00142 RecA protein signature 257 286 6.8E-81 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 PRINTS PR00142 RecA protein signature 311 328 6.8E-81 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 PRINTS PR00142 RecA protein signature 223 251 6.8E-81 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 PRINTS PR00142 RecA protein signature 178 207 6.8E-81 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 16 338 8.1E-164 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 Gene3D G3DSA:3.30.250.10 284 341 3.8E-23 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JO40_06850 8f115f391927f97f20e27d63889ec42e 414 ProSitePatterns PS00321 recA signature. 226 234 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 Pfam PF00154 recA bacterial DNA recombination protein 19 281 1.7E-139 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 Gene3D G3DSA:3.40.50.300 42 281 1.4E-81 T 14-10-2018 JO40_06850 8f115f391927f97f20e27d63889ec42e 414 SMART SM00382 70 241 3.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07835 b7b4455bfc955ac38cfe8e7a5b336e33 382 Gene3D G3DSA:3.30.565.10 261 376 1.0E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_07835 b7b4455bfc955ac38cfe8e7a5b336e33 382 SUPERFAMILY SSF55874 246 375 2.88E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_07835 b7b4455bfc955ac38cfe8e7a5b336e33 382 Pfam PF07730 Histidine kinase 184 248 8.6E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JO40_03710 fd2ce6f6254dac6ab758eb72a4cd3e6f 193 Pfam PF14281 PD-(D/E)XK nuclease superfamily 12 187 4.7E-17 T 14-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 JO40_05800 724adacdd3766acdf947539ab088c669 262 Gene3D G3DSA:1.20.140.160 101 257 4.7E-48 T 14-10-2018 JO40_05800 724adacdd3766acdf947539ab088c669 262 Gene3D G3DSA:1.10.1740.10 15 100 3.0E-30 T 14-10-2018 JO40_05800 724adacdd3766acdf947539ab088c669 262 Pfam PF04545 Sigma-70, region 4 203 251 2.1E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 PIRSF PIRSF000770 11 261 6.5E-56 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 PRINTS PR00046 Major sigma-70 factor signature 57 70 3.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 PRINTS PR00046 Major sigma-70 factor signature 224 239 3.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 PRINTS PR00046 Major sigma-70 factor signature 239 250 3.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 PRINTS PR00046 Major sigma-70 factor signature 207 219 3.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 SUPERFAMILY SSF88659 166 256 2.43E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_05800 724adacdd3766acdf947539ab088c669 262 SUPERFAMILY SSF88946 7 102 8.79E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 Pfam PF04539 Sigma-70 region 3 110 182 1.8E-9 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 SUPERFAMILY SSF88659 103 180 2.88E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_05800 724adacdd3766acdf947539ab088c669 262 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 31 255 5.2E-88 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JO40_05800 724adacdd3766acdf947539ab088c669 262 Pfam PF04542 Sigma-70 region 2 31 102 4.1E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO40_05800 724adacdd3766acdf947539ab088c669 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 254 2.9E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO40_05750 0ff56d5f9e3bfd8a49c979e4cf7f0557 371 Gene3D G3DSA:3.30.450.40 28 198 4.9E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily JO40_05750 0ff56d5f9e3bfd8a49c979e4cf7f0557 371 SUPERFAMILY SSF55073 222 364 2.12E-43 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_05750 0ff56d5f9e3bfd8a49c979e4cf7f0557 371 Gene3D G3DSA:3.30.70.270 199 368 1.2E-50 T 14-10-2018 JO40_05750 0ff56d5f9e3bfd8a49c979e4cf7f0557 371 SMART SM00267 189 364 3.6E-47 T 14-10-2018 IPR000160 GGDEF domain JO40_05750 0ff56d5f9e3bfd8a49c979e4cf7f0557 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 359 8.0E-42 T 14-10-2018 IPR000160 GGDEF domain JO40_05750 0ff56d5f9e3bfd8a49c979e4cf7f0557 371 SUPERFAMILY SSF55781 36 199 1.59E-11 T 14-10-2018 JO40_05750 0ff56d5f9e3bfd8a49c979e4cf7f0557 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 363 6.3E-49 T 14-10-2018 IPR000160 GGDEF domain JO40_07220 db4925d482a7ad46a52d58e815f562c3 150 PIRSF PIRSF005384 1 148 4.6E-53 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO40_07220 db4925d482a7ad46a52d58e815f562c3 150 SUPERFAMILY SSF89623 1 145 2.88E-47 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO40_07220 db4925d482a7ad46a52d58e815f562c3 150 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 2.2E-43 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO40_07220 db4925d482a7ad46a52d58e815f562c3 150 Pfam PF02502 Ribose/Galactose Isomerase 3 140 1.5E-43 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO40_07220 db4925d482a7ad46a52d58e815f562c3 150 Gene3D G3DSA:3.40.1400.10 1 148 6.9E-48 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO40_01930 50fd95eafb97425de0b8eab44e0d9baa 794 SUPERFAMILY SSF53850 117 756 4.07E-29 T 14-10-2018 JO40_01930 50fd95eafb97425de0b8eab44e0d9baa 794 Gene3D G3DSA:3.40.190.10 298 461 2.8E-21 T 14-10-2018 JO40_01930 50fd95eafb97425de0b8eab44e0d9baa 794 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 116 658 2.4E-25 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_01930 50fd95eafb97425de0b8eab44e0d9baa 794 Gene3D G3DSA:3.90.76.10 93 218 6.4E-9 T 14-10-2018 JO40_02020 eb8f1dcd46975ed64f9a393be9b3b0bf 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 JO40_02020 eb8f1dcd46975ed64f9a393be9b3b0bf 142 SUPERFAMILY SSF52161 1 139 1.1E-52 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02020 eb8f1dcd46975ed64f9a393be9b3b0bf 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 4.8E-61 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02020 eb8f1dcd46975ed64f9a393be9b3b0bf 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 25.653 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JO40_02020 eb8f1dcd46975ed64f9a393be9b3b0bf 142 Gene3D G3DSA:3.90.1180.10 1 142 1.9E-56 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02020 eb8f1dcd46975ed64f9a393be9b3b0bf 142 PIRSF PIRSF002181 1 142 1.7E-46 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JO40_02020 eb8f1dcd46975ed64f9a393be9b3b0bf 142 Pfam PF00572 Ribosomal protein L13 15 137 2.0E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 SUPERFAMILY SSF81271 284 365 1.24E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 368 3.9E-143 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 Gene3D G3DSA:1.10.150.300 113 203 9.0E-147 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 Pfam PF06071 Protein of unknown function (DUF933) 284 367 2.7E-40 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 Gene3D G3DSA:3.40.50.300 4 283 9.0E-147 T 14-10-2018 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 SUPERFAMILY SSF52540 3 305 2.35E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 Pfam PF01926 50S ribosome-binding GTPase 5 126 1.0E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 PIRSF PIRSF006641 1 368 8.0E-156 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 Gene3D G3DSA:3.10.20.30 48 366 9.0E-147 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO40_04170 a2d2a164f337c2c8cd988b22c4e46a11 368 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 368 42.814 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JO40_12325 d8c0d5e102ed796d1ecca539f7e7a741 217 Gene3D G3DSA:3.30.420.10 11 178 2.6E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO40_12325 d8c0d5e102ed796d1ecca539f7e7a741 217 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 183 4.5E-47 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_12325 d8c0d5e102ed796d1ecca539f7e7a741 217 SMART SM00479 15 181 1.4E-46 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JO40_12325 d8c0d5e102ed796d1ecca539f7e7a741 217 SUPERFAMILY SSF53098 16 193 2.73E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO40_12325 d8c0d5e102ed796d1ecca539f7e7a741 217 Pfam PF00929 Exonuclease 18 172 1.2E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JO40_02160 8e66180674c10a1f2eba1a5a2b47b15e 441 Gene3D G3DSA:1.20.1250.20 242 440 9.0E-21 T 14-10-2018 JO40_02160 8e66180674c10a1f2eba1a5a2b47b15e 441 Pfam PF13347 MFS/sugar transport protein 17 411 5.8E-18 T 14-10-2018 JO40_02160 8e66180674c10a1f2eba1a5a2b47b15e 441 SUPERFAMILY SSF103473 1 438 5.76E-46 T 14-10-2018 IPR036259 MFS transporter superfamily JO40_02160 8e66180674c10a1f2eba1a5a2b47b15e 441 Gene3D G3DSA:1.20.1250.20 3 236 8.7E-17 T 14-10-2018 JO40_07500 948ce52bcbce8a32b8bf175a7c548791 250 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 9 244 59.414 T 14-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 JO40_07500 948ce52bcbce8a32b8bf175a7c548791 250 SUPERFAMILY SSF52467 4 244 1.43E-76 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO40_07500 948ce52bcbce8a32b8bf175a7c548791 250 Pfam PF02146 Sir2 family 25 200 1.4E-49 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 JO40_07500 948ce52bcbce8a32b8bf175a7c548791 250 Gene3D G3DSA:3.40.50.1220 16 234 2.2E-74 T 14-10-2018 JO40_07500 948ce52bcbce8a32b8bf175a7c548791 250 Gene3D G3DSA:3.30.1600.10 34 170 2.2E-74 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily JO40_03145 8981850cbbce1936d14a6b2c959c20a1 67 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 3 58 1.4E-21 T 14-10-2018 IPR017507 Transcription regulator, HipB-like JO40_03145 8981850cbbce1936d14a6b2c959c20a1 67 Gene3D G3DSA:1.10.260.40 1 66 3.1E-11 T 14-10-2018 JO40_03145 8981850cbbce1936d14a6b2c959c20a1 67 Pfam PF13560 Helix-turn-helix domain 4 56 3.9E-8 T 14-10-2018 JO40_03145 8981850cbbce1936d14a6b2c959c20a1 67 SUPERFAMILY SSF47413 2 57 6.44E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_11110 794125eb156e0309fef4513ec89f815d 742 SUPERFAMILY SSF51126 475 670 2.7E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO40_11110 794125eb156e0309fef4513ec89f815d 742 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 125 186 8.8E-8 T 14-10-2018 JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 SUPERFAMILY SSF103190 61 156 7.85E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 SMART SM00052 539 788 6.8E-66 T 14-10-2018 IPR001633 EAL domain JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 526 2.3E-16 T 14-10-2018 IPR000160 GGDEF domain JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 SUPERFAMILY SSF55073 378 526 8.63E-22 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 Gene3D G3DSA:3.30.450.20 50 285 8.6E-32 T 14-10-2018 JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 Gene3D G3DSA:3.30.450.20 62 174 8.6E-32 T 14-10-2018 JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 SUPERFAMILY SSF141868 545 795 1.05E-71 T 14-10-2018 IPR035919 EAL domain superfamily JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 Gene3D G3DSA:3.30.70.270 372 531 4.3E-23 T 14-10-2018 JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 523 2.6E-16 T 14-10-2018 IPR000160 GGDEF domain JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 Pfam PF00563 EAL domain 545 783 2.5E-58 T 14-10-2018 IPR001633 EAL domain JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 Gene3D G3DSA:3.20.20.450 543 798 2.6E-75 T 14-10-2018 IPR035919 EAL domain superfamily JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 SMART SM00267 362 527 2.8E-7 T 14-10-2018 IPR000160 GGDEF domain JO40_04325 3a05d579282dbf594b6ea2c34ec91b7f 799 Pfam PF02743 Cache domain 42 273 1.7E-21 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 Gene3D G3DSA:1.10.10.10 1 142 1.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 TIGRFAM TIGR04472 reg_rSAM_mob: mobile rSAM pair MarR family regulator 4 144 5.4E-88 T 14-10-2018 IPR031011 MarR family transcriptional regulator JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 2.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 2.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 2.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 Pfam PF01047 MarR family 35 89 3.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 SMART SM00347 22 125 5.7E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO40_10615 d71eebc7a91f70ea9bce763dc33d5f2b 145 SUPERFAMILY SSF46785 7 143 5.55E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 97 110 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 PIRSF PIRSF000185 1 413 2.3E-169 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 SUPERFAMILY SSF53223 3 180 8.32E-67 T 14-10-2018 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 178 411 5.8E-79 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 Gene3D G3DSA:3.40.50.10860 34 177 9.0E-66 T 14-10-2018 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 169 191 5.1E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 89 103 5.1E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 339 350 5.1E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 211 231 5.1E-33 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 Gene3D G3DSA:3.40.50.720 178 413 2.5E-89 T 14-10-2018 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 SUPERFAMILY SSF51735 178 412 1.08E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 SMART SM00839 180 411 4.8E-92 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_01865 c0f599586f87420166a1d3df1b8107f3 413 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 32 159 6.2E-58 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO40_06810 027d748ad97d6fae79710a47ff394bdb 356 Pfam PF02277 Phosphoribosyltransferase 11 344 2.5E-103 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JO40_06810 027d748ad97d6fae79710a47ff394bdb 356 Gene3D G3DSA:3.40.50.10210 57 329 2.8E-109 T 14-10-2018 JO40_06810 027d748ad97d6fae79710a47ff394bdb 356 SUPERFAMILY SSF52733 5 347 3.66E-98 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JO40_06810 027d748ad97d6fae79710a47ff394bdb 356 Gene3D G3DSA:1.10.1610.10 11 338 2.8E-109 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JO40_06810 027d748ad97d6fae79710a47ff394bdb 356 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 345 1.4E-114 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 Gene3D G3DSA:1.20.1480.50 325 417 8.6E-7 T 14-10-2018 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 529 668 3.4E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 Gene3D G3DSA:3.30.450.20 73 324 8.7E-58 T 14-10-2018 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 Pfam PF00672 HAMP domain 359 405 5.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 SMART SM00304 357 411 1.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 Gene3D G3DSA:1.10.287.950 439 743 8.7E-47 T 14-10-2018 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 Pfam PF02743 Cache domain 63 307 2.0E-16 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 Gene3D G3DSA:3.30.450.20 79 225 8.7E-58 T 14-10-2018 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 581 610 2.3E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 552 579 2.3E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 475 504 2.3E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 SMART SM00283 454 701 4.9E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02540 701431861fd6ceb04b951bc157cef8a8 744 SUPERFAMILY SSF58104 379 699 3.79E-49 T 14-10-2018 JO40_09775 f42a4d0d3dacc54075087d8577d42209 138 Pfam PF08241 Methyltransferase domain 8 78 1.2E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JO40_09775 f42a4d0d3dacc54075087d8577d42209 138 Gene3D G3DSA:3.40.50.150 1 124 2.9E-13 T 14-10-2018 JO40_09775 f42a4d0d3dacc54075087d8577d42209 138 SUPERFAMILY SSF53335 5 122 4.22E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 Gene3D G3DSA:1.10.287.950 444 668 1.3E-39 T 14-10-2018 JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 Pfam PF02743 Cache domain 116 281 4.0E-19 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 SMART SM00283 417 664 9.9E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 SUPERFAMILY SSF103190 107 198 3.92E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 Gene3D G3DSA:1.20.1480.50 285 379 2.0E-6 T 14-10-2018 JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 Gene3D G3DSA:3.30.450.20 155 284 7.7E-18 T 14-10-2018 JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 SMART SM00304 320 374 6.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 SUPERFAMILY SSF58104 342 674 6.02E-49 T 14-10-2018 JO40_00175 50b2d0d018dc21b80f6c8e266e20b833 708 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 491 629 2.1E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00740 67ae7d6f344f479bb4eb1eb9ee4404ab 262 SUPERFAMILY SSF69572 4 257 1.44E-50 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 JO40_00740 67ae7d6f344f479bb4eb1eb9ee4404ab 262 Pfam PF00899 ThiF family 10 260 1.5E-37 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JO40_00740 67ae7d6f344f479bb4eb1eb9ee4404ab 262 Gene3D G3DSA:3.40.50.720 3 58 8.6E-11 T 14-10-2018 JO40_00740 67ae7d6f344f479bb4eb1eb9ee4404ab 262 Gene3D G3DSA:3.40.50.720 65 260 3.7E-45 T 14-10-2018 JO40_08650 127d50e55e49507be69e668491be4847 389 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 52 70 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site JO40_08650 127d50e55e49507be69e668491be4847 389 SUPERFAMILY SSF50621 246 388 1.78E-33 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 SUPERFAMILY SSF51419 23 271 6.25E-63 T 14-10-2018 IPR029066 PLP-binding barrel JO40_08650 127d50e55e49507be69e668491be4847 389 Gene3D G3DSA:3.20.20.10 31 271 2.4E-100 T 14-10-2018 IPR029066 PLP-binding barrel JO40_08650 127d50e55e49507be69e668491be4847 389 Gene3D G3DSA:2.40.37.10 20 381 2.4E-100 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 268 1.0E-52 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 269 366 5.8E-16 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 1.6E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 1.6E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 259 278 1.6E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 1.6E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01182 Ornithine decarboxylase signature 330 340 5.8E-16 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01182 Ornithine decarboxylase signature 124 146 5.8E-16 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01182 Ornithine decarboxylase signature 50 77 5.8E-16 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO40_08650 127d50e55e49507be69e668491be4847 389 PRINTS PR01182 Ornithine decarboxylase signature 94 118 5.8E-16 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO40_02575 3f5d73cdeec5088891518bf673d7dd87 107 SUPERFAMILY SSF52091 6 106 1.51E-19 T 14-10-2018 IPR036513 STAS domain superfamily JO40_02575 3f5d73cdeec5088891518bf673d7dd87 107 Pfam PF01740 STAS domain 12 105 1.9E-15 T 14-10-2018 IPR002645 STAS domain JO40_02575 3f5d73cdeec5088891518bf673d7dd87 107 Gene3D G3DSA:3.30.750.24 1 106 4.7E-20 T 14-10-2018 IPR036513 STAS domain superfamily JO40_02575 3f5d73cdeec5088891518bf673d7dd87 107 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 7 106 4.0E-15 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 SUPERFAMILY SSF53697 6 511 4.45E-149 T 14-10-2018 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 Pfam PF00342 Phosphoglucose isomerase 56 511 2.6E-126 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 Gene3D G3DSA:1.10.1390.10 494 514 3.4E-6 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 512 36.216 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 Gene3D G3DSA:3.40.50.10490 101 292 8.0E-158 T 14-10-2018 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 Gene3D G3DSA:3.40.50.10490 13 493 8.0E-158 T 14-10-2018 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 485 502 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 453 471 1.5E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 1.5E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.5E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 1.5E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 471 485 1.5E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_02395 992d48fb9277a10f63c212bff6d9da7f 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 485 498 1.5E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_06720 630bd8e7bd5f622916170ed43b2de719 1152 Gene3D G3DSA:2.60.40.10 725 814 3.9E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_06720 630bd8e7bd5f622916170ed43b2de719 1152 SUPERFAMILY SSF48726 722 807 2.48E-7 T 14-10-2018 IPR036179 Immunoglobulin-like domain superfamily JO40_03810 e2f851efeb42eda2c0357811d38854dc 459 Pfam PF01212 Beta-eliminating lyase 47 423 4.8E-93 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JO40_03810 e2f851efeb42eda2c0357811d38854dc 459 Gene3D G3DSA:3.40.640.10 59 319 2.1E-207 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_03810 e2f851efeb42eda2c0357811d38854dc 459 Gene3D G3DSA:3.90.1150.10 7 453 2.1E-207 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_03810 e2f851efeb42eda2c0357811d38854dc 459 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 248 266 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 JO40_03810 e2f851efeb42eda2c0357811d38854dc 459 PIRSF PIRSF001386 1 459 1.5E-224 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 JO40_03810 e2f851efeb42eda2c0357811d38854dc 459 SUPERFAMILY SSF53383 3 458 3.27E-140 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_03810 e2f851efeb42eda2c0357811d38854dc 459 Hamap MF_00544 Tryptophanase [tnaA]. 2 458 95.726 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 JO40_13190 1f1ba5ebb177de3c3860ed2868ff17b4 540 Gene3D G3DSA:3.20.20.80 1 540 1.6E-173 T 14-10-2018 JO40_13190 1f1ba5ebb177de3c3860ed2868ff17b4 540 Pfam PF02446 4-alpha-glucanotransferase 9 518 1.4E-143 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JO40_13190 1f1ba5ebb177de3c3860ed2868ff17b4 540 SUPERFAMILY SSF51445 2 539 2.31E-152 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_13190 1f1ba5ebb177de3c3860ed2868ff17b4 540 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 539 7.7E-109 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JO40_00140 d249792a4fb51ee1efc57f543ab6eefc 213 Pfam PF04542 Sigma-70 region 2 38 102 1.1E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO40_00140 d249792a4fb51ee1efc57f543ab6eefc 213 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 187 7.7E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO40_00140 d249792a4fb51ee1efc57f543ab6eefc 213 SUPERFAMILY SSF88659 119 188 1.68E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_00140 d249792a4fb51ee1efc57f543ab6eefc 213 Gene3D G3DSA:1.10.10.10 112 193 8.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_00140 d249792a4fb51ee1efc57f543ab6eefc 213 Gene3D G3DSA:1.10.1740.10 13 111 4.8E-26 T 14-10-2018 JO40_00140 d249792a4fb51ee1efc57f543ab6eefc 213 SUPERFAMILY SSF88946 13 120 1.2E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO40_00140 d249792a4fb51ee1efc57f543ab6eefc 213 Pfam PF08281 Sigma-70, region 4 131 182 4.3E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO40_10520 66cde07ab5df42bb6f2c45eec951112b 303 SUPERFAMILY SSF51261 68 298 2.77E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_10520 66cde07ab5df42bb6f2c45eec951112b 303 Gene3D G3DSA:2.70.70.10 169 303 3.2E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_10520 66cde07ab5df42bb6f2c45eec951112b 303 Pfam PF01551 Peptidase family M23 201 295 8.9E-31 T 14-10-2018 IPR016047 Peptidase M23 JO40_08995 87d4e640a09fada2baa3f8ee1c8f2076 213 Pfam PF00753 Metallo-beta-lactamase superfamily 21 197 1.4E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_08995 87d4e640a09fada2baa3f8ee1c8f2076 213 SUPERFAMILY SSF56281 16 207 6.36E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_08995 87d4e640a09fada2baa3f8ee1c8f2076 213 SMART SM00849 12 197 6.6E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_08995 87d4e640a09fada2baa3f8ee1c8f2076 213 Gene3D G3DSA:3.60.15.10 1 212 3.5E-56 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_05780 45ac577273e9422248769ed965344440 299 Pfam PF14257 Domain of unknown function (DUF4349) 20 282 6.5E-62 T 14-10-2018 IPR025645 Domain of unknown function DUF4349 JO40_12915 078a220af805a305b17b2e6f30c66964 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_12915 078a220af805a305b17b2e6f30c66964 493 Pfam PF13237 4Fe-4S dicluster domain 142 206 6.5E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_12915 078a220af805a305b17b2e6f30c66964 493 Gene3D G3DSA:3.30.70.20 111 169 4.4E-12 T 14-10-2018 JO40_12915 078a220af805a305b17b2e6f30c66964 493 Gene3D G3DSA:3.40.950.20 265 488 1.1E-32 T 14-10-2018 JO40_12915 078a220af805a305b17b2e6f30c66964 493 TIGRFAM TIGR04105 FeFe_hydrog_B1: [FeFe] hydrogenase, group B1/B3 5 468 3.2E-165 T 14-10-2018 IPR027631 [FeFe] hydrogenase, group B1/B3 JO40_12915 078a220af805a305b17b2e6f30c66964 493 Gene3D G3DSA:3.30.70.20 170 217 9.8E-14 T 14-10-2018 JO40_12915 078a220af805a305b17b2e6f30c66964 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_12915 078a220af805a305b17b2e6f30c66964 493 SUPERFAMILY SSF54862 141 215 4.6E-17 T 14-10-2018 JO40_12915 078a220af805a305b17b2e6f30c66964 493 SUPERFAMILY SSF53920 194 471 7.98E-65 T 14-10-2018 IPR009016 Iron hydrogenase JO40_12915 078a220af805a305b17b2e6f30c66964 493 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 227 463 3.3E-56 T 14-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 SUPERFAMILY SSF53271 239 400 8.13E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 85 188 2.4E-23 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 82 401 1.1E-100 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 SUPERFAMILY SSF53271 87 230 1.14E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 Gene3D G3DSA:3.40.50.2020 231 376 9.3E-32 T 14-10-2018 JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 Pfam PF00156 Phosphoribosyl transferase domain 212 338 7.6E-24 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 SMART SM01400 9 184 8.8E-10 T 14-10-2018 JO40_04205 04a5f35d393346c4536556f3d81f15b4 418 Gene3D G3DSA:3.40.50.2020 66 230 5.1E-39 T 14-10-2018 JO40_04260 7ce659d66f2dd441e36b4248cd9107cf 457 Pfam PF03616 Sodium/glutamate symporter 3 199 4.0E-53 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO40_04260 7ce659d66f2dd441e36b4248cd9107cf 457 Pfam PF03616 Sodium/glutamate symporter 259 424 2.1E-49 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO40_04260 7ce659d66f2dd441e36b4248cd9107cf 457 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 456 21.681 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 4.3E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 SUPERFAMILY SSF64518 1 286 1.31E-79 T 14-10-2018 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 9.7E-37 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 Gene3D G3DSA:1.20.1330.10 43 185 1.9E-58 T 14-10-2018 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 Gene3D G3DSA:1.20.58.1830 3 31 1.9E-58 T 14-10-2018 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 PRINTS PR00207 Flagellin signature 74 93 5.2E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 PRINTS PR00207 Flagellin signature 35 52 5.2E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 PRINTS PR00207 Flagellin signature 109 132 5.2E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_11930 5eb928588aa18e7eb5107c514ff1c22a 286 Gene3D G3DSA:1.10.8.410 232 286 6.8E-24 T 14-10-2018 JO40_08215 4c0a1f5b494a499b1970d2a808503303 600 Pfam PF00005 ABC transporter 372 523 4.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08215 4c0a1f5b494a499b1970d2a808503303 600 Gene3D G3DSA:3.40.50.300 341 596 1.7E-71 T 14-10-2018 JO40_08215 4c0a1f5b494a499b1970d2a808503303 600 SUPERFAMILY SSF90123 15 318 2.09E-11 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08215 4c0a1f5b494a499b1970d2a808503303 600 SMART SM00382 380 568 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08215 4c0a1f5b494a499b1970d2a808503303 600 SUPERFAMILY SSF52540 351 593 1.16E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 Gene3D G3DSA:3.40.630.10 45 460 9.0E-147 T 14-10-2018 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 128 148 3.7E-28 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 436 451 3.7E-28 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 298 316 3.7E-28 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 95 111 3.7E-28 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 342 358 3.7E-28 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 164 181 3.7E-28 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 SUPERFAMILY SSF101821 107 248 5.4E-31 T 14-10-2018 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 32 469 8.6E-88 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 SUPERFAMILY SSF53187 9 470 3.11E-96 T 14-10-2018 JO40_02400 58376ed8c1f0da64d19c663bc0563363 470 Gene3D G3DSA:2.30.250.10 106 253 9.0E-147 T 14-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 JO40_09800 159bb426caf9a550dd50a75ee99c6638 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 11 322 4.9E-37 T 14-10-2018 IPR016040 NAD(P)-binding domain JO40_09800 159bb426caf9a550dd50a75ee99c6638 354 Gene3D G3DSA:3.90.25.10 188 352 5.7E-61 T 14-10-2018 JO40_09800 159bb426caf9a550dd50a75ee99c6638 354 SUPERFAMILY SSF51735 7 331 1.28E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_09800 159bb426caf9a550dd50a75ee99c6638 354 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 4 347 8.3E-139 T 14-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 JO40_09800 159bb426caf9a550dd50a75ee99c6638 354 Gene3D G3DSA:3.40.50.720 2 186 8.1E-49 T 14-10-2018 JO40_00605 b80e03532f1ad0d1e00f7f5f1162c13f 146 SUPERFAMILY SSF49764 27 144 5.06E-38 T 14-10-2018 IPR008978 HSP20-like chaperone JO40_00605 b80e03532f1ad0d1e00f7f5f1162c13f 146 Gene3D G3DSA:2.60.40.790 3 145 3.3E-38 T 14-10-2018 IPR008978 HSP20-like chaperone JO40_00605 b80e03532f1ad0d1e00f7f5f1162c13f 146 Pfam PF00011 Hsp20/alpha crystallin family 44 143 3.1E-27 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain JO40_05905 bcdf3443eb9cd8ed7890b45353c65f8e 136 Pfam PF01850 PIN domain 5 117 7.2E-9 T 14-10-2018 IPR002716 PIN domain JO40_05905 bcdf3443eb9cd8ed7890b45353c65f8e 136 SUPERFAMILY SSF88723 1 133 4.21E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_05905 bcdf3443eb9cd8ed7890b45353c65f8e 136 Gene3D G3DSA:3.40.50.1010 2 132 2.8E-7 T 14-10-2018 JO40_01545 88dd1af54106c354a3f135dcf3c574c8 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 1.2E-43 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_01545 88dd1af54106c354a3f135dcf3c574c8 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 225 9.8E-18 T 14-10-2018 JO40_04920 b0fc1487407422155df101426cfcd1c9 80 SUPERFAMILY SSF47598 3 43 5.71E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 SMART SM00962 88 290 5.1E-86 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 Pfam PF00448 SRP54-type protein, GTPase domain 89 289 1.9E-64 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 Gene3D G3DSA:3.40.50.300 88 278 4.1E-83 T 14-10-2018 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 SMART SM00382 87 235 2.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 SMART SM00963 1 76 9.2E-4 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 263 276 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 21 287 2.4E-88 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 SUPERFAMILY SSF52540 83 289 7.91E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 SUPERFAMILY SSF47364 3 76 1.16E-10 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 Gene3D G3DSA:1.20.120.140 19 286 4.1E-83 T 14-10-2018 JO40_12840 76968560f0a0c5ffd43b9e81d406048d 292 Pfam PF02881 SRP54-type protein, helical bundle domain 8 69 1.4E-5 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO40_12385 f255c23e3191ac09f9f409a884087cce 143 Gene3D G3DSA:3.40.630.30 1 142 6.5E-27 T 14-10-2018 JO40_12385 f255c23e3191ac09f9f409a884087cce 143 Pfam PF13673 Acetyltransferase (GNAT) domain 27 135 1.3E-11 T 14-10-2018 IPR000182 GNAT domain JO40_12385 f255c23e3191ac09f9f409a884087cce 143 SUPERFAMILY SSF55729 1 139 2.19E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_07065 0d53ee075cdf95360e97d7b4301054ed 269 Gene3D G3DSA:1.10.443.10 86 268 2.8E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO40_07065 0d53ee075cdf95360e97d7b4301054ed 269 SUPERFAMILY SSF56349 7 263 8.83E-43 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO40_07065 0d53ee075cdf95360e97d7b4301054ed 269 Pfam PF00589 Phage integrase family 118 255 2.0E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO40_07065 0d53ee075cdf95360e97d7b4301054ed 269 Gene3D G3DSA:1.10.150.130 3 84 7.3E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JO40_11665 7e49b69a21beedda97f59d874706bcc8 479 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 4 161 7.8E-48 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 JO40_11665 7e49b69a21beedda97f59d874706bcc8 479 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 189 434 1.4E-46 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 JO40_11665 7e49b69a21beedda97f59d874706bcc8 479 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 4 161 3.0E-39 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 SUPERFAMILY SSF55681 119 588 6.84E-101 T 14-10-2018 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 Pfam PF01336 OB-fold nucleic acid binding domain 22 107 1.6E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 479 495 7.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 209 7.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 523 537 7.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 227 7.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 Gene3D G3DSA:3.30.1360.30 279 424 1.4E-190 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 587 1.1E-224 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 562 7.3E-103 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 5 589 33.232 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 Gene3D G3DSA:3.30.930.10 123 586 1.4E-190 T 14-10-2018 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 SUPERFAMILY SSF55261 296 423 8.67E-33 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 Pfam PF02938 GAD domain 315 410 9.8E-28 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 Gene3D G3DSA:2.40.50.140 1 112 2.6E-33 T 14-10-2018 JO40_11325 071c4ba6327ed563f1afae45830a836e 590 SUPERFAMILY SSF50249 6 110 1.37E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_08840 3e2fe901407b89c53f55ca90083e0209 347 SMART SM00028 91 124 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08840 3e2fe901407b89c53f55ca90083e0209 347 SMART SM00028 167 200 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08840 3e2fe901407b89c53f55ca90083e0209 347 SUPERFAMILY SSF48452 86 203 3.29E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08840 3e2fe901407b89c53f55ca90083e0209 347 Gene3D G3DSA:1.25.40.10 19 214 7.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07855 d9e0fd5e7ab9c260426adf670b06a8b7 120 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 95 9.9E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO40_07855 d9e0fd5e7ab9c260426adf670b06a8b7 120 Gene3D G3DSA:3.30.2310.20 1 100 2.4E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_07855 d9e0fd5e7ab9c260426adf670b06a8b7 120 SUPERFAMILY SSF143011 1 92 5.89E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_06090 c5dbe1944ab2851d547eb2487ed3c7ec 370 SUPERFAMILY SSF53335 14 333 1.45E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_06090 c5dbe1944ab2851d547eb2487ed3c7ec 370 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 246 252 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_06090 c5dbe1944ab2851d547eb2487ed3c7ec 370 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 243 255 3.0E-7 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO40_06090 c5dbe1944ab2851d547eb2487ed3c7ec 370 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 69 82 3.0E-7 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO40_06090 c5dbe1944ab2851d547eb2487ed3c7ec 370 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 19 35 3.0E-7 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO40_06090 c5dbe1944ab2851d547eb2487ed3c7ec 370 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 19 331 2.6E-22 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO40_02310 3976cd410d03cdbca0965091aebbac82 102 Gene3D G3DSA:3.30.70.600 3 102 3.0E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JO40_02310 3976cd410d03cdbca0965091aebbac82 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.5E-34 T 14-10-2018 IPR027486 Ribosomal protein S10 domain JO40_02310 3976cd410d03cdbca0965091aebbac82 102 SMART SM01403 7 101 1.5E-52 T 14-10-2018 IPR027486 Ribosomal protein S10 domain JO40_02310 3976cd410d03cdbca0965091aebbac82 102 SUPERFAMILY SSF54999 5 101 1.31E-35 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JO40_02310 3976cd410d03cdbca0965091aebbac82 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 24.949 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02310 3976cd410d03cdbca0965091aebbac82 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.5E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02310 3976cd410d03cdbca0965091aebbac82 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.5E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02310 3976cd410d03cdbca0965091aebbac82 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.5E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02310 3976cd410d03cdbca0965091aebbac82 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.5E-44 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02310 3976cd410d03cdbca0965091aebbac82 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.2E-69 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 SUPERFAMILY SSF50249 2 123 7.42E-53 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_00400 945a8ec5666a859cd5c661aad442958d 124 PIRSF PIRSF002133 1 124 6.1E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.2E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.288 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00400 945a8ec5666a859cd5c661aad442958d 124 Gene3D G3DSA:2.40.50.140 1 124 5.9E-64 T 14-10-2018 JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 Gene3D G3DSA:1.10.10.1140 557 660 1.4E-40 T 14-10-2018 JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 Pfam PF02540 NAD synthase 349 492 2.2E-24 T 14-10-2018 IPR022310 NAD/GMP synthase JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 PIRSF PIRSF006630 14 131 2.6E-12 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 PIRSF PIRSF006630 163 652 6.4E-69 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 Gene3D G3DSA:3.60.110.10 7 312 1.2E-26 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 SUPERFAMILY SSF56317 15 247 3.35E-16 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 Gene3D G3DSA:3.40.50.620 316 542 1.8E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 TIGRFAM TIGR00552 nadE: NAD+ synthetase 353 491 4.4E-20 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 JO40_09635 a6e6350db2350eed6195e4786eb926ba 662 SUPERFAMILY SSF52402 338 630 4.63E-60 T 14-10-2018 JO40_10325 efe666474f5fb1de45e5a462caf8c3f6 77 SMART SM00966 6 51 2.4E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_10325 efe666474f5fb1de45e5a462caf8c3f6 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 2.5E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_10325 efe666474f5fb1de45e5a462caf8c3f6 77 SUPERFAMILY SSF89447 1 67 9.24E-13 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO40_10325 efe666474f5fb1de45e5a462caf8c3f6 77 Gene3D G3DSA:2.10.260.10 1 77 5.0E-21 T 14-10-2018 JO40_06670 a38c39f9e18c72f3eb36ff50cbc30152 394 SUPERFAMILY SSF56784 13 236 5.93E-21 T 14-10-2018 IPR036412 HAD-like superfamily JO40_06670 a38c39f9e18c72f3eb36ff50cbc30152 394 Pfam PF12710 haloacid dehalogenase-like hydrolase 19 216 2.7E-9 T 14-10-2018 JO40_06670 a38c39f9e18c72f3eb36ff50cbc30152 394 Gene3D G3DSA:3.40.50.1000 18 258 5.9E-17 T 14-10-2018 IPR023214 HAD superfamily JO40_11370 9e5ad23e34bba16b22cacde509ea8904 176 Pfam PF00293 NUDIX domain 29 128 1.1E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JO40_11370 9e5ad23e34bba16b22cacde509ea8904 176 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JO40_11370 9e5ad23e34bba16b22cacde509ea8904 176 SUPERFAMILY SSF55811 16 148 1.23E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JO40_11370 9e5ad23e34bba16b22cacde509ea8904 176 Gene3D G3DSA:3.90.79.10 20 154 3.8E-19 T 14-10-2018 JO40_02250 4386904581802f92bbd6c87c43858572 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 103 6.6E-34 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02250 4386904581802f92bbd6c87c43858572 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 103 1.3E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02250 4386904581802f92bbd6c87c43858572 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02250 4386904581802f92bbd6c87c43858572 104 SUPERFAMILY SSF50104 4 102 6.09E-31 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO40_02250 4386904581802f92bbd6c87c43858572 104 Pfam PF00467 KOW motif 10 39 2.7E-6 T 14-10-2018 IPR005824 KOW JO40_02250 4386904581802f92bbd6c87c43858572 104 Gene3D G3DSA:2.30.30.30 1 103 2.8E-36 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO40_02250 4386904581802f92bbd6c87c43858572 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 98 18.844 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02250 4386904581802f92bbd6c87c43858572 104 SMART SM00739 6 33 5.7E-4 T 14-10-2018 IPR005824 KOW JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 SUPERFAMILY SSF47323 595 858 3.55E-56 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Gene3D G3DSA:1.10.287.380 840 908 1.6E-16 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Gene3D G3DSA:1.10.730.10 10 771 0.0 T 14-10-2018 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 PRINTS PR00986 Valyl-tRNA synthetase signature 494 512 5.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 PRINTS PR00986 Valyl-tRNA synthetase signature 249 266 5.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 PRINTS PR00986 Valyl-tRNA synthetase signature 365 378 5.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 PRINTS PR00986 Valyl-tRNA synthetase signature 463 484 5.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 PRINTS PR00986 Valyl-tRNA synthetase signature 45 56 5.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Gene3D G3DSA:3.40.50.620 30 543 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Hamap MF_02004 Valine--tRNA ligase [valS]. 10 909 15.549 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 891 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 844 909 7.2E-15 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 570 1.3E-209 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Gene3D G3DSA:3.90.740.10 184 361 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 SUPERFAMILY SSF46589 844 908 1.41E-14 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 63 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 Pfam PF08264 Anticodon-binding domain of tRNA 629 783 2.2E-37 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 SUPERFAMILY SSF50677 200 361 7.06E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO40_12230 38d9d0fe432961e290d10adf95f60b7c 909 SUPERFAMILY SSF52374 8 588 4.79E-144 T 14-10-2018 JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 381 2.9E-74 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 392 29.72 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 SUPERFAMILY SSF82866 203 390 1.07E-37 T 14-10-2018 JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 196 378 5.9E-55 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 1.0E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 PRINTS PR01755 Bacterial translocase SecF protein signature 249 263 1.0E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 PRINTS PR01755 Bacterial translocase SecF protein signature 329 344 1.0E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 PRINTS PR01755 Bacterial translocase SecF protein signature 297 315 1.0E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 Gene3D G3DSA:1.20.1640.10 206 400 5.6E-14 T 14-10-2018 JO40_07320 0d4c8dd3f76609e3103ae96ba16a3e82 413 Pfam PF02355 Protein export membrane protein 210 387 4.9E-62 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JO40_05140 f0ed486e9a4cb096ea54ecd145cfa23c 175 Pfam PF03938 Outer membrane protein (OmpH-like) 12 170 7.0E-20 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 JO40_05140 f0ed486e9a4cb096ea54ecd145cfa23c 175 SMART SM00935 11 171 4.5E-21 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 JO40_05140 f0ed486e9a4cb096ea54ecd145cfa23c 175 Gene3D G3DSA:3.30.910.20 14 175 2.8E-19 T 14-10-2018 IPR024930 Skp domain superfamily JO40_05140 f0ed486e9a4cb096ea54ecd145cfa23c 175 SUPERFAMILY SSF111384 23 170 5.75E-22 T 14-10-2018 JO40_11980 383bed63ebf4ff040eb768c374656689 183 Gene3D G3DSA:2.10.109.10 55 182 5.9E-20 T 14-10-2018 JO40_11980 383bed63ebf4ff040eb768c374656689 183 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 1 177 2.7E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_11980 383bed63ebf4ff040eb768c374656689 183 SUPERFAMILY SSF51306 1 183 4.55E-24 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO40_11980 383bed63ebf4ff040eb768c374656689 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 70 82 6.2E-8 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_11980 383bed63ebf4ff040eb768c374656689 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 6.2E-8 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_05095 5590b5059338cb47100dd08bddec59bb 378 SUPERFAMILY SSF52540 141 372 2.27E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05095 5590b5059338cb47100dd08bddec59bb 378 Pfam PF00158 Sigma-54 interaction domain 142 305 5.7E-54 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO40_05095 5590b5059338cb47100dd08bddec59bb 378 Gene3D G3DSA:1.10.8.60 312 372 1.2E-14 T 14-10-2018 JO40_05095 5590b5059338cb47100dd08bddec59bb 378 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 347 356 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JO40_05095 5590b5059338cb47100dd08bddec59bb 378 Gene3D G3DSA:3.40.50.300 129 311 4.7E-55 T 14-10-2018 JO40_05095 5590b5059338cb47100dd08bddec59bb 378 SMART SM00382 162 304 1.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02560 9daaaf674b64208040badb5dd42dadaf 320 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 317 4.7E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_02560 9daaaf674b64208040badb5dd42dadaf 320 Pfam PF00005 ABC transporter 27 178 3.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_02560 9daaaf674b64208040badb5dd42dadaf 320 SUPERFAMILY SSF52540 5 249 9.82E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02560 9daaaf674b64208040badb5dd42dadaf 320 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_02560 9daaaf674b64208040badb5dd42dadaf 320 Gene3D G3DSA:3.40.50.300 3 320 3.3E-98 T 14-10-2018 JO40_02560 9daaaf674b64208040badb5dd42dadaf 320 SMART SM00382 35 228 4.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02560 9daaaf674b64208040badb5dd42dadaf 320 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 297 4.4E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_02795 892d6b16d0c1505a893cf8fc3600d467 209 Gene3D G3DSA:3.60.10.10 2 208 1.1E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_02795 892d6b16d0c1505a893cf8fc3600d467 209 SUPERFAMILY SSF56219 11 208 1.31E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_04950 c8af4462cbedfe970c53ac2ab0f08cf9 319 SUPERFAMILY SSF50331 233 317 4.31E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO40_04950 c8af4462cbedfe970c53ac2ab0f08cf9 319 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_04950 c8af4462cbedfe970c53ac2ab0f08cf9 319 Gene3D G3DSA:3.40.50.300 1 282 1.8E-74 T 14-10-2018 JO40_04950 c8af4462cbedfe970c53ac2ab0f08cf9 319 SUPERFAMILY SSF52540 3 239 4.24E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04950 c8af4462cbedfe970c53ac2ab0f08cf9 319 Pfam PF00005 ABC transporter 18 160 1.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04950 c8af4462cbedfe970c53ac2ab0f08cf9 319 SMART SM00382 27 210 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12870 d961b3d2dde62879b6f51d8c506ca677 131 Gene3D G3DSA:3.30.160.250 1 93 4.3E-19 T 14-10-2018 JO40_12870 d961b3d2dde62879b6f51d8c506ca677 131 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 8 106 7.3E-13 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system JO40_12870 d961b3d2dde62879b6f51d8c506ca677 131 SUPERFAMILY SSF143100 1 65 9.55E-16 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 PIRSF PIRSF005419 1 698 9.7E-224 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 1.5E-42 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 29 42 1.5E-42 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 1.5E-42 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 1.5E-42 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 66 85 1.5E-42 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 1.5E-42 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 Gene3D G3DSA:1.10.8.540 502 592 1.6E-22 T 14-10-2018 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 Gene3D G3DSA:3.40.30.60 359 501 1.1E-52 T 14-10-2018 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 12 693 1.8E-270 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 Gene3D G3DSA:1.10.490.80 594 693 2.6E-6 T 14-10-2018 JO40_03815 bce5e362495d36eaf8e9981ad1513ce7 698 Pfam PF00771 FHIPEP family 22 685 2.5E-229 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO40_11405 29fc263b70ae3e0e3a3ee14bf1cab93d 353 SUPERFAMILY SSF53271 66 316 2.9E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_11405 29fc263b70ae3e0e3a3ee14bf1cab93d 353 Gene3D G3DSA:3.40.50.2020 82 317 6.4E-35 T 14-10-2018 JO40_11405 29fc263b70ae3e0e3a3ee14bf1cab93d 353 Pfam PF14681 Uracil phosphoribosyltransferase 88 315 8.9E-23 T 14-10-2018 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 SUPERFAMILY SSF55174 4 204 8.37E-52 T 14-10-2018 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 Gene3D G3DSA:1.10.1050.10 5 204 2.3E-65 T 14-10-2018 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 29.13 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 Gene3D G3DSA:3.10.290.10 94 189 2.3E-65 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 93 117 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 4 94 1.5E-22 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 Pfam PF01479 S4 domain 95 142 1.1E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 SMART SM01390 2 94 4.5E-31 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 4 204 1.8E-60 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO40_13125 f496e0c567e1910dd08b32c616cd2ad0 206 SMART SM00363 95 155 6.7E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_10570 8c23ec5286e94310feb6eb66280cfe7b 665 Gene3D G3DSA:2.40.10.120 58 241 4.6E-17 T 14-10-2018 JO40_10570 8c23ec5286e94310feb6eb66280cfe7b 665 SUPERFAMILY SSF50494 26 237 8.68E-19 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO40_00720 63bf634c969e1a383b7a50f6760c50ed 184 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 179 1.5E-42 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 JO40_00720 63bf634c969e1a383b7a50f6760c50ed 184 Gene3D G3DSA:3.40.50.880 1 183 3.4E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_00720 63bf634c969e1a383b7a50f6760c50ed 184 Pfam PF01965 DJ-1/PfpI family 2 166 3.0E-41 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JO40_00720 63bf634c969e1a383b7a50f6760c50ed 184 SUPERFAMILY SSF52317 1 179 9.41E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 Gene3D G3DSA:3.40.50.150 217 499 7.6E-60 T 14-10-2018 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 PIRSF PIRSF015855 367 604 9.1E-30 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 PIRSF PIRSF015855 113 393 2.7E-61 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 Pfam PF12564 Type III restriction/modification enzyme methylation subunit 52 107 2.1E-8 T 14-10-2018 IPR022221 Type III restriction/modification enzyme methylation subunit JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 Pfam PF01555 DNA methylase 243 471 5.5E-46 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 246 252 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 SUPERFAMILY SSF53335 216 486 2.7E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 277 297 8.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 456 476 8.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 433 451 8.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 242 256 8.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_07195 ac3a344b319b7f4a9229aaa929299609 611 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 414 431 8.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_12330 28b01741d801084f121ee0f3cbe50fdc 581 Gene3D G3DSA:1.20.1560.10 134 328 2.4E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_12330 28b01741d801084f121ee0f3cbe50fdc 581 SUPERFAMILY SSF52540 336 577 6.71E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12330 28b01741d801084f121ee0f3cbe50fdc 581 SUPERFAMILY SSF90123 17 307 3.92E-15 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_12330 28b01741d801084f121ee0f3cbe50fdc 581 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_12330 28b01741d801084f121ee0f3cbe50fdc 581 Gene3D G3DSA:3.40.50.300 334 580 4.7E-74 T 14-10-2018 JO40_12330 28b01741d801084f121ee0f3cbe50fdc 581 SMART SM00382 367 553 4.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12330 28b01741d801084f121ee0f3cbe50fdc 581 Pfam PF00005 ABC transporter 358 507 4.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_07010 7263786254f3915bd66c32c728f2c43f 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 11 196 1.0E-26 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_07010 7263786254f3915bd66c32c728f2c43f 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 13 196 4.6E-38 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 32 189 6.2E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 374 2.1E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 Gene3D G3DSA:3.30.300.20 386 469 3.2E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 Hamap MF_00195 GTPase Der [der]. 30 469 32.283 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 31 466 4.6E-143 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 Pfam PF01926 50S ribosome-binding GTPase 210 328 3.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 Pfam PF01926 50S ribosome-binding GTPase 33 152 9.1E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 SUPERFAMILY SSF52540 173 468 3.03E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 PIRSF PIRSF006485 29 474 3.0E-139 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 386 466 1.9E-23 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 SUPERFAMILY SSF52540 33 193 4.27E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 33 53 4.0E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 106 124 4.0E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 Gene3D G3DSA:3.40.50.300 203 384 9.9E-50 T 14-10-2018 JO40_06265 461d9f5bfbb5bcbcef3f5e5749ceeafd 476 Gene3D G3DSA:3.40.50.300 33 197 4.3E-33 T 14-10-2018 JO40_06745 a7a7292c42f4de47ace9874eff0021a4 282 Pfam PF12784 PD-(D/E)XK nuclease family transposase 12 240 1.9E-75 T 14-10-2018 JO40_06745 a7a7292c42f4de47ace9874eff0021a4 282 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 13 281 9.4E-46 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_12035 fcbf771ee8f2f6589d4dd553a5df7f8f 587 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 333 457 3.0E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_12035 fcbf771ee8f2f6589d4dd553a5df7f8f 587 SUPERFAMILY SSF52540 133 260 5.9E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12035 fcbf771ee8f2f6589d4dd553a5df7f8f 587 Gene3D G3DSA:3.40.50.300 296 462 4.4E-25 T 14-10-2018 JO40_12035 fcbf771ee8f2f6589d4dd553a5df7f8f 587 Gene3D G3DSA:1.10.8.60 465 540 5.6E-7 T 14-10-2018 JO40_12035 fcbf771ee8f2f6589d4dd553a5df7f8f 587 SMART SM00382 328 463 0.0019 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12035 fcbf771ee8f2f6589d4dd553a5df7f8f 587 SUPERFAMILY SSF52540 300 555 3.88E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09705 0276ed900f1fa8810edae9d0a0bf3a69 141 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 12 138 2.2E-24 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 JO40_09705 0276ed900f1fa8810edae9d0a0bf3a69 141 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 11 138 2.7E-31 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 JO40_09705 0276ed900f1fa8810edae9d0a0bf3a69 141 SUPERFAMILY SSF81593 6 137 6.28E-33 T 14-10-2018 JO40_09705 0276ed900f1fa8810edae9d0a0bf3a69 141 Gene3D G3DSA:1.20.120.330 6 141 3.0E-30 T 14-10-2018 JO40_11555 032cfe28d28121340c0199251e5fde89 203 Gene3D G3DSA:1.10.1760.20 5 198 2.5E-45 T 14-10-2018 JO40_11555 032cfe28d28121340c0199251e5fde89 203 PIRSF PIRSF016661 2 199 4.9E-30 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 JO40_11555 032cfe28d28121340c0199251e5fde89 203 Pfam PF02632 BioY family 34 191 1.2E-33 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 SUPERFAMILY SSF46557 746 819 2.88E-16 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 Hamap MF_00105 Transcription elongation factor GreA [greA]. 743 896 25.663 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 Gene3D G3DSA:1.10.287.180 743 816 3.5E-16 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 SUPERFAMILY SSF54534 823 895 2.88E-17 T 14-10-2018 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 758 789 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 SUPERFAMILY SSF48452 139 183 1.52E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 Gene3D G3DSA:3.10.50.30 819 897 3.0E-20 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 822 896 1.1E-24 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 747 895 4.2E-47 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 Pfam PF03449 Transcription elongation factor, N-terminal 746 815 1.5E-16 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JO40_01780 8d08d0d67ff2de16bb81dfbcece1a030 901 Gene3D G3DSA:1.25.40.10 91 281 1.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 SUPERFAMILY SSF53182 1 216 1.57E-67 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 Pfam PF01470 Pyroglutamyl peptidase 1 205 5.8E-83 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 203 38.424 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 3.8E-38 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 3.8E-38 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 3.8E-38 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 3.8E-38 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 PIRSF PIRSF015592 1 215 6.6E-80 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 Gene3D G3DSA:3.40.630.20 1 217 3.9E-75 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 JO40_04695 0092c5fc350a1304ea804db0c9ae0891 217 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 216 5.1E-78 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 JO40_09750 fa67cc59af2df742484eb74f4e4c39ba 347 Pfam PF04230 Polysaccharide pyruvyl transferase 1 288 3.1E-25 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase JO40_02745 4a2e2249e4b691a0c8289dfd74544ea3 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 87 320 1.5E-105 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO40_02745 4a2e2249e4b691a0c8289dfd74544ea3 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 85 1.6E-34 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO40_02745 4a2e2249e4b691a0c8289dfd74544ea3 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 397 54.874 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO40_02745 4a2e2249e4b691a0c8289dfd74544ea3 397 Pfam PF07055 Enoyl reductase FAD binding domain 328 391 2.6E-27 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO40_02745 4a2e2249e4b691a0c8289dfd74544ea3 397 Gene3D G3DSA:3.40.50.720 1 397 1.5E-174 T 14-10-2018 JO40_08920 97434d7f936e749285436842aac90d2d 155 Gene3D G3DSA:3.40.630.30 7 153 3.1E-30 T 14-10-2018 JO40_08920 97434d7f936e749285436842aac90d2d 155 Pfam PF00583 Acetyltransferase (GNAT) family 28 144 8.3E-14 T 14-10-2018 IPR000182 GNAT domain JO40_08920 97434d7f936e749285436842aac90d2d 155 SUPERFAMILY SSF55729 20 145 6.51E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 5.4E-37 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 PRINTS PR00207 Flagellin signature 109 132 1.7E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 PRINTS PR00207 Flagellin signature 35 52 1.7E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 PRINTS PR00207 Flagellin signature 74 93 1.7E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 Gene3D G3DSA:1.10.8.410 237 286 5.1E-27 T 14-10-2018 JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 Gene3D G3DSA:1.20.1330.10 48 236 2.9E-53 T 14-10-2018 JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 SUPERFAMILY SSF64518 1 286 6.02E-83 T 14-10-2018 JO40_07995 1f492ff74757685f0ea3cfa9ff38897b 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 7.9E-28 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO40_00725 9dd6c24bec7306f4b4b2b1400e1bea67 253 Gene3D G3DSA:2.20.25.110 155 211 1.7E-42 T 14-10-2018 JO40_00725 9dd6c24bec7306f4b4b2b1400e1bea67 253 SUPERFAMILY SSF53335 28 253 6.37E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_00725 9dd6c24bec7306f4b4b2b1400e1bea67 253 Gene3D G3DSA:3.40.50.150 30 236 1.7E-42 T 14-10-2018 JO40_00725 9dd6c24bec7306f4b4b2b1400e1bea67 253 Pfam PF13649 Methyltransferase domain 52 147 9.6E-17 T 14-10-2018 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Gene3D G3DSA:3.90.1440.10 229 375 2.8E-164 T 14-10-2018 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 ProSitePatterns PS01312 SecA family signature. 507 522 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 SUPERFAMILY SSF81886 633 909 3.79E-70 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 PRINTS PR00906 SecA protein signature 420 433 1.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 PRINTS PR00906 SecA protein signature 117 127 1.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 PRINTS PR00906 SecA protein signature 63 87 1.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 PRINTS PR00906 SecA protein signature 101 115 1.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 PRINTS PR00906 SecA protein signature 170 190 1.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 PRINTS PR00906 SecA protein signature 346 368 1.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 PRINTS PR00906 SecA protein signature 383 400 1.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Gene3D G3DSA:1.10.3060.10 634 845 2.4E-60 T 14-10-2018 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Gene3D G3DSA:3.10.450.50 881 920 1.5E-8 T 14-10-2018 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Pfam PF07516 SecA Wing and Scaffold domain 630 842 7.9E-58 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 SUPERFAMILY SSF52540 424 631 3.04E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 SUPERFAMILY SSF52540 9 422 2.66E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 844 19.72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Pfam PF02810 SEC-C motif 901 919 6.1E-10 T 14-10-2018 IPR004027 SEC-C motif JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Gene3D G3DSA:3.40.50.300 23 422 2.8E-164 T 14-10-2018 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 SMART SM00957 6 409 2.0E-264 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Pfam PF01043 SecA preprotein cross-linking domain 257 365 8.3E-33 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 SUPERFAMILY SSF81767 270 374 7.98E-37 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 SMART SM00958 228 365 5.8E-64 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Pfam PF07517 SecA DEAD-like domain 7 408 1.4E-126 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 Gene3D G3DSA:3.40.50.300 424 633 5.1E-87 T 14-10-2018 JO40_11230 4a9a035ee92502fa028db0dec7d5058a 921 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 830 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 SUPERFAMILY SSF48452 167 311 1.26E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 Gene3D G3DSA:1.25.40.10 43 126 7.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 SMART SM00028 165 198 0.015 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 SMART SM00028 58 91 49.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 SMART SM00028 233 266 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 SMART SM00028 131 164 2.7E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 SMART SM00028 271 304 91.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 SUPERFAMILY SSF48452 50 222 3.63E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 Pfam PF13181 Tetratricopeptide repeat 171 198 0.041 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 Pfam PF00515 Tetratricopeptide repeat 134 163 8.2E-9 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 Pfam PF04471 Restriction endonuclease 363 441 1.0E-5 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 Pfam PF13174 Tetratricopeptide repeat 59 87 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 Gene3D G3DSA:1.25.40.10 228 324 8.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03485 a095e4cb9bb1b8e2a852ad50884b965a 446 Gene3D G3DSA:1.25.40.10 127 227 5.4E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03550 0b4b31a9b80c0f8ec74e8de187783d68 304 Pfam PF04468 PSP1 C-terminal conserved region 94 178 7.1E-22 T 14-10-2018 IPR007557 PSP1, C-terminal JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 Pfam PF02743 Cache domain 43 278 2.1E-23 T 14-10-2018 IPR033479 Double Cache domain 1 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 Pfam PF00672 HAMP domain 316 361 3.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 SMART SM00283 413 660 1.5E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 SUPERFAMILY SSF58104 338 436 2.62E-8 T 14-10-2018 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 Gene3D G3DSA:1.10.287.130 313 398 3.2E-5 T 14-10-2018 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 SUPERFAMILY SSF103190 117 190 2.09E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 Gene3D G3DSA:3.30.450.20 154 298 1.9E-22 T 14-10-2018 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 480 628 2.9E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 588 617 4.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 4.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 4.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 4.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 Gene3D G3DSA:1.10.287.950 399 702 2.7E-48 T 14-10-2018 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 SUPERFAMILY SSF58104 417 657 3.66E-46 T 14-10-2018 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 SMART SM00304 391 444 24.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_00705 ff3bcd5b733be9a833e65b50661bbbbe 703 SMART SM00304 316 370 1.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_00250 d5571ceeac2bdbafb81c6c2dbe2a4924 349 Pfam PF04143 Sulphur transport 206 316 6.6E-10 T 14-10-2018 IPR007272 Sulphur transport domain JO40_00250 d5571ceeac2bdbafb81c6c2dbe2a4924 349 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 6 341 5.8E-153 T 14-10-2018 IPR026366 Putative selenium metabolism protein, YedE family JO40_09950 8c05354baf2477e1738d1a71dbb70ab9 952 SUPERFAMILY SSF53649 703 835 3.36E-7 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JO40_09950 8c05354baf2477e1738d1a71dbb70ab9 952 Gene3D G3DSA:3.40.720.10 544 895 1.5E-12 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JO40_09950 8c05354baf2477e1738d1a71dbb70ab9 952 Pfam PF02096 60Kd inner membrane protein 33 218 5.1E-22 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_05110 64bb3c3e246de155a94c97b0c75ad8ba 313 Gene3D G3DSA:1.25.40.10 104 310 1.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_05110 64bb3c3e246de155a94c97b0c75ad8ba 313 Gene3D G3DSA:1.25.40.10 15 103 5.9E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_05110 64bb3c3e246de155a94c97b0c75ad8ba 313 Pfam PF13525 Outer membrane lipoprotein 16 170 1.1E-5 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like JO40_05110 64bb3c3e246de155a94c97b0c75ad8ba 313 SUPERFAMILY SSF48452 7 151 4.47E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01085 06ba2d95b078be98ad3b874cb4ffb11d 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 3 11 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JO40_01085 06ba2d95b078be98ad3b874cb4ffb11d 348 Gene3D G3DSA:3.20.20.140 1 339 2.2E-72 T 14-10-2018 JO40_01085 06ba2d95b078be98ad3b874cb4ffb11d 348 SUPERFAMILY SSF51556 1 317 1.55E-67 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_00115 582719a14d79fb5eebc4b0acc3220b8a 147 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 25.62 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 JO40_00115 582719a14d79fb5eebc4b0acc3220b8a 147 SUPERFAMILY SSF141457 1 141 5.89E-45 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily JO40_00115 582719a14d79fb5eebc4b0acc3220b8a 147 Pfam PF02623 FliW protein 19 137 4.6E-39 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 JO40_00115 582719a14d79fb5eebc4b0acc3220b8a 147 Gene3D G3DSA:2.30.290.10 1 146 6.0E-49 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily JO40_07380 db930cb9ce8cb942364db9a97b87a8ab 269 SUPERFAMILY SSF53613 4 266 6.86E-66 T 14-10-2018 IPR029056 Ribokinase-like JO40_07380 db930cb9ce8cb942364db9a97b87a8ab 269 Pfam PF08543 Phosphomethylpyrimidine kinase 11 259 4.5E-80 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 JO40_07380 db930cb9ce8cb942364db9a97b87a8ab 269 Gene3D G3DSA:3.40.1190.20 2 266 2.8E-77 T 14-10-2018 IPR029056 Ribokinase-like JO40_07380 db930cb9ce8cb942364db9a97b87a8ab 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 259 6.9E-70 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JO40_11520 d6afcfcd401366a7a39ae676cfe6a61c 239 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 23 235 3.0E-67 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JO40_11520 d6afcfcd401366a7a39ae676cfe6a61c 239 SUPERFAMILY SSF75445 142 220 1.03E-19 T 14-10-2018 JO40_11520 d6afcfcd401366a7a39ae676cfe6a61c 239 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 239 31.1 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JO40_11520 d6afcfcd401366a7a39ae676cfe6a61c 239 Gene3D G3DSA:3.40.50.1360 7 235 9.5E-72 T 14-10-2018 JO40_11520 d6afcfcd401366a7a39ae676cfe6a61c 239 SUPERFAMILY SSF100950 3 190 1.6E-36 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO40_11520 d6afcfcd401366a7a39ae676cfe6a61c 239 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 59 234 8.8E-61 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JO40_11520 d6afcfcd401366a7a39ae676cfe6a61c 239 Gene3D G3DSA:3.30.70.260 138 218 9.5E-72 T 14-10-2018 JO40_11300 bee7d8271c72518d70ab1fe4acdb59cc 491 Gene3D G3DSA:3.40.50.2000 254 467 2.6E-170 T 14-10-2018 JO40_11300 bee7d8271c72518d70ab1fe4acdb59cc 491 Hamap MF_00484 Glycogen synthase [glgA]. 1 483 40.042 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JO40_11300 bee7d8271c72518d70ab1fe4acdb59cc 491 Gene3D G3DSA:3.40.50.2000 3 481 2.6E-170 T 14-10-2018 JO40_11300 bee7d8271c72518d70ab1fe4acdb59cc 491 Pfam PF00534 Glycosyl transferases group 1 287 438 2.0E-10 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO40_11300 bee7d8271c72518d70ab1fe4acdb59cc 491 SUPERFAMILY SSF53756 2 485 3.93E-111 T 14-10-2018 JO40_11300 bee7d8271c72518d70ab1fe4acdb59cc 491 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 482 8.1E-161 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JO40_11300 bee7d8271c72518d70ab1fe4acdb59cc 491 Pfam PF08323 Starch synthase catalytic domain 2 240 1.3E-79 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JO40_06035 6456a32601f2704ab756402463111940 663 SUPERFAMILY SSF52540 202 468 5.78E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06035 6456a32601f2704ab756402463111940 663 ProSitePatterns PS00674 AAA-protein family signature. 343 361 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 JO40_06035 6456a32601f2704ab756402463111940 663 Pfam PF06480 FtsH Extracellular 39 144 4.7E-7 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 JO40_06035 6456a32601f2704ab756402463111940 663 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 241 372 2.0E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_06035 6456a32601f2704ab756402463111940 663 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 149 644 7.5E-222 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JO40_06035 6456a32601f2704ab756402463111940 663 SMART SM00382 237 375 2.4E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06035 6456a32601f2704ab756402463111940 663 Pfam PF01434 Peptidase family M41 434 643 1.6E-74 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JO40_06035 6456a32601f2704ab756402463111940 663 Gene3D G3DSA:3.40.50.300 193 373 2.1E-68 T 14-10-2018 JO40_06035 6456a32601f2704ab756402463111940 663 Gene3D G3DSA:1.10.8.60 374 451 2.1E-24 T 14-10-2018 JO40_06035 6456a32601f2704ab756402463111940 663 Gene3D G3DSA:1.20.58.760 454 661 4.1E-67 T 14-10-2018 JO40_06035 6456a32601f2704ab756402463111940 663 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 33 659 35.29 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JO40_06035 6456a32601f2704ab756402463111940 663 SUPERFAMILY SSF140990 454 648 5.75E-62 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JO40_03255 a57c96bbd157c2d97859f1463ec507da 160 Pfam PF00583 Acetyltransferase (GNAT) family 36 143 5.1E-11 T 14-10-2018 IPR000182 GNAT domain JO40_03255 a57c96bbd157c2d97859f1463ec507da 160 Gene3D G3DSA:3.40.630.30 48 157 5.8E-20 T 14-10-2018 JO40_03255 a57c96bbd157c2d97859f1463ec507da 160 SUPERFAMILY SSF55729 2 149 6.03E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 PRINTS PR01011 Glutathione peroxidase family signature 144 153 6.4E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 PRINTS PR01011 Glutathione peroxidase family signature 21 38 6.4E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 PRINTS PR01011 Glutathione peroxidase family signature 56 72 6.4E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 PIRSF PIRSF000303 1 180 3.1E-55 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 Gene3D G3DSA:3.40.30.10 1 180 1.9E-65 T 14-10-2018 JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 Pfam PF00255 Glutathione peroxidase 3 110 7.9E-40 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JO40_04095 e3d2cd99c3a7ebbcddba5ec8a17e5707 180 SUPERFAMILY SSF52833 2 179 6.56E-53 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO40_10500 4acd0e9c1f85927021c2f0706e996c15 256 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 254 8.7E-96 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JO40_10500 4acd0e9c1f85927021c2f0706e996c15 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 1.8E-18 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JO40_10500 4acd0e9c1f85927021c2f0706e996c15 256 SUPERFAMILY SSF56219 4 255 4.71E-74 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_10500 4acd0e9c1f85927021c2f0706e996c15 256 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 254 8.8E-90 T 14-10-2018 JO40_10500 4acd0e9c1f85927021c2f0706e996c15 256 Gene3D G3DSA:3.60.10.10 3 256 9.2E-87 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_10500 4acd0e9c1f85927021c2f0706e996c15 256 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 JO40_10500 4acd0e9c1f85927021c2f0706e996c15 256 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 192 207 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 JO40_08845 de23601571847e02702c8c81f5256936 429 SUPERFAMILY SSF53955 87 237 3.38E-35 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO40_08845 de23601571847e02702c8c81f5256936 429 SUPERFAMILY SSF54106 315 360 1.57E-10 T 14-10-2018 JO40_08845 de23601571847e02702c8c81f5256936 429 SMART SM00257 382 426 4.8E-13 T 14-10-2018 IPR018392 LysM domain JO40_08845 de23601571847e02702c8c81f5256936 429 SMART SM00257 316 360 9.9E-17 T 14-10-2018 IPR018392 LysM domain JO40_08845 de23601571847e02702c8c81f5256936 429 SUPERFAMILY SSF54106 383 426 8.5E-10 T 14-10-2018 JO40_08845 de23601571847e02702c8c81f5256936 429 Gene3D G3DSA:3.10.350.10 315 360 1.7E-16 T 14-10-2018 IPR036779 LysM domain superfamily JO40_08845 de23601571847e02702c8c81f5256936 429 Gene3D G3DSA:3.10.350.10 371 429 3.4E-14 T 14-10-2018 IPR036779 LysM domain superfamily JO40_08845 de23601571847e02702c8c81f5256936 429 Pfam PF01464 Transglycosylase SLT domain 90 201 7.9E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JO40_08845 de23601571847e02702c8c81f5256936 429 Gene3D G3DSA:1.10.530.10 84 237 1.2E-31 T 14-10-2018 JO40_08845 de23601571847e02702c8c81f5256936 429 Pfam PF01476 LysM domain 317 360 7.7E-14 T 14-10-2018 IPR018392 LysM domain JO40_08845 de23601571847e02702c8c81f5256936 429 Pfam PF01476 LysM domain 384 426 4.1E-13 T 14-10-2018 IPR018392 LysM domain JO40_05195 addd37d1f0ea179e652db6441cbd7137 259 Gene3D G3DSA:1.20.1600.10 71 256 9.3E-8 T 14-10-2018 JO40_05195 addd37d1f0ea179e652db6441cbd7137 259 SUPERFAMILY SSF56954 96 254 4.58E-9 T 14-10-2018 JO40_05195 addd37d1f0ea179e652db6441cbd7137 259 Pfam PF02321 Outer membrane efflux protein 80 253 3.7E-11 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 Pfam PF01145 SPFH domain / Band 7 family 28 195 4.5E-28 T 14-10-2018 IPR001107 Band 7 domain JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 PRINTS PR00721 Stomatin signature 79 100 1.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 PRINTS PR00721 Stomatin signature 158 176 1.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 PRINTS PR00721 Stomatin signature 177 198 1.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 PRINTS PR00721 Stomatin signature 114 131 1.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 PRINTS PR00721 Stomatin signature 134 157 1.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 Gene3D G3DSA:3.30.479.30 52 184 8.1E-42 T 14-10-2018 JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 SMART SM00244 24 182 3.6E-58 T 14-10-2018 IPR001107 Band 7 domain JO40_01835 cd13a98800a0a62695dc83b26787d8f5 305 SUPERFAMILY SSF117892 55 189 9.02E-42 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO40_02965 56b97075c3157b07e3b0be9d0e0368a5 106 Pfam PF04993 TfoX N-terminal domain 13 73 9.8E-10 T 14-10-2018 IPR007076 TfoX, N-terminal JO40_02965 56b97075c3157b07e3b0be9d0e0368a5 106 SUPERFAMILY SSF159894 5 91 9.42E-17 T 14-10-2018 JO40_07355 ef6287a075c167231d397e7a3d14666b 158 SUPERFAMILY SSF52255 2 153 1.57E-35 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 JO40_07355 ef6287a075c167231d397e7a3d14666b 158 SMART SM01001 3 150 1.5E-40 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JO40_07355 ef6287a075c167231d397e7a3d14666b 158 Gene3D G3DSA:3.40.50.7700 1 158 8.8E-54 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 JO40_07355 ef6287a075c167231d397e7a3d14666b 158 Hamap MF_02045 Phosphoribosylaminoimidazole carboxylase [purE]. 3 158 36.484 T 14-10-2018 IPR033626 Class II PurE GO:0006189 KEGG: 00230+4.1.1.21|MetaCyc: PWY-6124|Reactome: R-HSA-73817 JO40_07355 ef6287a075c167231d397e7a3d14666b 158 Pfam PF00731 AIR carboxylase 5 148 6.7E-36 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JO40_07355 ef6287a075c167231d397e7a3d14666b 158 PIRSF PIRSF001338 1 158 2.3E-39 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 JO40_10640 8f1ebf5c28a681c6891ed2ea8717b30d 338 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 116 329 3.4E-47 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JO40_10640 8f1ebf5c28a681c6891ed2ea8717b30d 338 SMART SM00646 184 329 6.6E-29 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JO40_10640 8f1ebf5c28a681c6891ed2ea8717b30d 338 SUPERFAMILY SSF55383 28 94 1.2E-12 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily JO40_10640 8f1ebf5c28a681c6891ed2ea8717b30d 338 Pfam PF07833 Copper amine oxidase N-terminal domain 28 97 2.7E-8 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal JO40_10640 8f1ebf5c28a681c6891ed2ea8717b30d 338 Gene3D G3DSA:3.40.630.40 103 337 7.0E-56 T 14-10-2018 JO40_10640 8f1ebf5c28a681c6891ed2ea8717b30d 338 Gene3D G3DSA:3.30.457.10 28 101 1.6E-5 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily JO40_10640 8f1ebf5c28a681c6891ed2ea8717b30d 338 SUPERFAMILY SSF53187 115 332 2.13E-41 T 14-10-2018 JO40_03505 6b52209e6215f5bdc3ea52da0f7156ca 437 Gene3D G3DSA:3.40.50.1100 104 408 7.0E-79 T 14-10-2018 JO40_03505 6b52209e6215f5bdc3ea52da0f7156ca 437 Pfam PF14821 Threonine synthase N terminus 4 70 6.2E-8 T 14-10-2018 IPR029144 Threonine synthase, N-terminal JO40_03505 6b52209e6215f5bdc3ea52da0f7156ca 437 Gene3D G3DSA:3.90.1380.10 1 85 2.1E-10 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily JO40_03505 6b52209e6215f5bdc3ea52da0f7156ca 437 Gene3D G3DSA:3.40.50.1100 87 402 7.0E-79 T 14-10-2018 JO40_03505 6b52209e6215f5bdc3ea52da0f7156ca 437 SUPERFAMILY SSF53686 1 433 4.09E-78 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JO40_07290 8797478fca545298edfcd0ef0a81d9c9 333 SUPERFAMILY SSF51206 5 116 3.4E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_07290 8797478fca545298edfcd0ef0a81d9c9 333 Gene3D G3DSA:2.60.120.10 5 111 7.1E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_07290 8797478fca545298edfcd0ef0a81d9c9 333 SUPERFAMILY SSF48452 205 312 7.59E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07290 8797478fca545298edfcd0ef0a81d9c9 333 Gene3D G3DSA:1.25.40.10 209 323 1.2E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_07290 8797478fca545298edfcd0ef0a81d9c9 333 Pfam PF00027 Cyclic nucleotide-binding domain 6 92 2.5E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_07290 8797478fca545298edfcd0ef0a81d9c9 333 SMART SM00028 207 240 90.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_07290 8797478fca545298edfcd0ef0a81d9c9 333 SMART SM00028 281 314 0.0036 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_00195 ee05983f9e04ab48480e1722dc09168f 551 Gene3D G3DSA:3.10.105.10 276 512 2.0E-32 T 14-10-2018 JO40_00195 ee05983f9e04ab48480e1722dc09168f 551 PIRSF PIRSF002741 1 512 6.7E-48 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO40_00195 ee05983f9e04ab48480e1722dc09168f 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 456 5.3E-45 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_00195 ee05983f9e04ab48480e1722dc09168f 551 SUPERFAMILY SSF53850 66 545 4.25E-71 T 14-10-2018 JO40_00195 ee05983f9e04ab48480e1722dc09168f 551 Gene3D G3DSA:3.40.190.10 11 275 2.2E-35 T 14-10-2018 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 Gene3D G3DSA:3.40.50.1980 215 322 4.4E-30 T 14-10-2018 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00690 Adhesin family signature 76 93 3.5E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00690 Adhesin family signature 63 76 3.5E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00690 Adhesin family signature 32 50 3.5E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00690 Adhesin family signature 239 257 3.5E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00691 Adhesin B signature 32 53 1.2E-10 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00691 Adhesin B signature 76 95 1.2E-10 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00691 Adhesin B signature 57 75 1.2E-10 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 PRINTS PR00691 Adhesin B signature 300 318 1.2E-10 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 SUPERFAMILY SSF53807 33 321 1.08E-80 T 14-10-2018 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 319 1.0E-73 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 JO40_08245 05674acc77dfbf29fcd36858ecfa661a 322 Gene3D G3DSA:3.40.50.1980 22 214 2.3E-52 T 14-10-2018 JO40_09265 10fb67d89b352de8b9c7531e327a6150 199 SUPERFAMILY SSF53335 20 199 1.74E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_09265 10fb67d89b352de8b9c7531e327a6150 199 Gene3D G3DSA:3.40.50.150 20 199 2.2E-50 T 14-10-2018 JO40_09265 10fb67d89b352de8b9c7531e327a6150 199 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 5 198 25.115 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 JO40_09265 10fb67d89b352de8b9c7531e327a6150 199 Pfam PF01728 FtsJ-like methyltransferase 21 197 7.9E-48 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JO40_09265 10fb67d89b352de8b9c7531e327a6150 199 PIRSF PIRSF005461 1 199 9.1E-67 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 JO40_00995 3515e664dfcc1dd5f7732853f8433f06 254 PIRSF PIRSF003078 7 254 3.3E-65 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO40_00995 3515e664dfcc1dd5f7732853f8433f06 254 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 27 250 20.538 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO40_00995 3515e664dfcc1dd5f7732853f8433f06 254 Gene3D G3DSA:3.40.50.150 16 254 8.2E-49 T 14-10-2018 JO40_00995 3515e664dfcc1dd5f7732853f8433f06 254 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 38 253 2.4E-38 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO40_00995 3515e664dfcc1dd5f7732853f8433f06 254 Pfam PF02527 rRNA small subunit methyltransferase G 37 82 5.2E-7 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO40_00995 3515e664dfcc1dd5f7732853f8433f06 254 Pfam PF02527 rRNA small subunit methyltransferase G 110 248 1.3E-31 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO40_00995 3515e664dfcc1dd5f7732853f8433f06 254 SUPERFAMILY SSF53335 30 253 6.89E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_00345 47d2fa9d25038e95248aedc9edc82537 692 SUPERFAMILY SSF58104 422 653 2.09E-42 T 14-10-2018 JO40_00345 47d2fa9d25038e95248aedc9edc82537 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 612 1.8E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00345 47d2fa9d25038e95248aedc9edc82537 692 SMART SM00283 402 649 1.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_00345 47d2fa9d25038e95248aedc9edc82537 692 Gene3D G3DSA:1.10.287.950 311 426 5.1E-8 T 14-10-2018 JO40_00345 47d2fa9d25038e95248aedc9edc82537 692 Gene3D G3DSA:1.10.287.950 428 645 1.2E-39 T 14-10-2018 JO40_00345 47d2fa9d25038e95248aedc9edc82537 692 SMART SM00304 308 359 2.0E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_00345 47d2fa9d25038e95248aedc9edc82537 692 SUPERFAMILY SSF58104 335 451 3.14E-6 T 14-10-2018 JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 Pfam PF04434 SWIM zinc finger 122 142 2.7E-6 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 Pfam PF12419 SNF2 Helicase protein 572 699 5.8E-24 T 14-10-2018 IPR022138 Helicase SWF/SNF-related JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 Gene3D G3DSA:1.20.120.850 964 1188 1.6E-85 T 14-10-2018 JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 Gene3D G3DSA:3.40.50.300 949 1152 1.6E-85 T 14-10-2018 JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 SMART SM00490 1054 1138 5.2E-20 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 SUPERFAMILY SSF52540 943 1193 7.78E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 Pfam PF00271 Helicase conserved C-terminal domain 1026 1138 1.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 Pfam PF00176 SNF2 family N-terminal domain 743 1011 3.4E-59 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 SUPERFAMILY SSF52540 695 940 7.14E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 Gene3D G3DSA:3.40.50.10810 704 939 1.4E-66 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily JO40_04610 43feb1e7ec4b589c42f5a93a72a2f09b 1194 SMART SM00487 729 914 1.7E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Gene3D G3DSA:3.40.50.20 1 99 2.3E-26 T 14-10-2018 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 SMART SM01210 337 430 2.7E-32 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 107 303 6.5E-77 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 106 3.7E-28 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 430 37.969 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 338 428 1.1E-21 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Gene3D G3DSA:3.30.470.20 195 337 3.8E-53 T 14-10-2018 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 SMART SM01209 107 303 3.5E-115 T 14-10-2018 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 297 304 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 SUPERFAMILY SSF52440 1 106 1.42E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 SUPERFAMILY SSF56059 108 333 1.48E-52 T 14-10-2018 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 430 5.0E-144 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 SUPERFAMILY SSF51246 336 429 2.43E-23 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Gene3D G3DSA:3.30.1490.20 125 194 2.2E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO40_12960 b2b7f292ae0b8de319ff875ebb007293 437 Gene3D G3DSA:3.90.600.10 338 435 7.6E-26 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JO40_08550 109fb185d661e0271428a598481ceaab 214 SUPERFAMILY SSF48008 81 207 7.32E-8 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JO40_08550 109fb185d661e0271428a598481ceaab 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 72 4.9E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO40_08550 109fb185d661e0271428a598481ceaab 214 Gene3D G3DSA:1.20.120.530 79 214 8.8E-7 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JO40_08550 109fb185d661e0271428a598481ceaab 214 Gene3D G3DSA:1.10.10.10 3 75 1.7E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_08550 109fb185d661e0271428a598481ceaab 214 SUPERFAMILY SSF46785 9 84 1.71E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 Gene3D G3DSA:2.30.30.30 127 184 1.0E-19 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 Pfam PF02357 Transcription termination factor nusG 3 114 4.0E-21 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 185 20.103 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 Pfam PF00467 KOW motif 135 162 8.1E-6 T 14-10-2018 IPR005824 KOW JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 SUPERFAMILY SSF82679 3 118 1.11E-24 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 SMART SM00739 131 158 0.0011 T 14-10-2018 IPR005824 KOW JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 Gene3D G3DSA:3.30.70.940 1 124 7.6E-33 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 SMART SM00738 2 117 2.0E-29 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 183 3.9E-54 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 SUPERFAMILY SSF50104 131 183 7.22E-15 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 8.2E-17 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 8.2E-17 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO40_00785 370c18ee0659b8ed94c42a1f4d6b82db 185 PRINTS PR00338 Transcription termination factor NUSG signature 58 70 8.2E-17 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO40_04375 b63d3aee9f9fe96c4765b806db4ec926 677 SUPERFAMILY SSF161098 425 665 7.06E-46 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04375 b63d3aee9f9fe96c4765b806db4ec926 677 Gene3D G3DSA:1.10.3720.10 421 676 8.7E-56 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04375 b63d3aee9f9fe96c4765b806db4ec926 677 SUPERFAMILY SSF160964 335 420 7.85E-7 T 14-10-2018 JO40_04375 b63d3aee9f9fe96c4765b806db4ec926 677 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 461 670 1.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_10455 3484480c895da222c14545378b16738d 83 Gene3D G3DSA:2.40.50.100 21 83 8.6E-27 T 14-10-2018 JO40_10455 3484480c895da222c14545378b16738d 83 Pfam PF01016 Ribosomal L27 protein 2 80 7.8E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10455 3484480c895da222c14545378b16738d 83 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 5.0E-19 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10455 3484480c895da222c14545378b16738d 83 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 25.16 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10455 3484480c895da222c14545378b16738d 83 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10455 3484480c895da222c14545378b16738d 83 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.6E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10455 3484480c895da222c14545378b16738d 83 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.6E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10455 3484480c895da222c14545378b16738d 83 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.6E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10455 3484480c895da222c14545378b16738d 83 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 77 1.1E-31 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10455 3484480c895da222c14545378b16738d 83 SUPERFAMILY SSF110324 2 77 2.96E-29 T 14-10-2018 JO40_04020 4ef2732721a278e22c4d4444bcc4000f 363 Gene3D G3DSA:3.30.565.10 238 361 1.5E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_04020 4ef2732721a278e22c4d4444bcc4000f 363 SUPERFAMILY SSF55874 251 358 1.06E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_04020 4ef2732721a278e22c4d4444bcc4000f 363 Pfam PF07730 Histidine kinase 173 235 9.8E-10 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JO40_04020 4ef2732721a278e22c4d4444bcc4000f 363 SMART SM00387 268 361 4.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_04020 4ef2732721a278e22c4d4444bcc4000f 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 274 357 1.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 227 43.913 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 1 245 1.4E-123 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 217 3.2E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 125 1.2E-29 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 SUPERFAMILY SSF53254 1 244 5.97E-77 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 SMART SM00855 2 188 1.1E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 Gene3D G3DSA:3.40.50.1240 1 247 9.5E-90 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 PIRSF PIRSF000709 2 111 7.1E-8 T 14-10-2018 JO40_10710 6ca2c5620229ec7ab356bb5bce1e8de7 247 PIRSF PIRSF000709 145 246 4.6E-4 T 14-10-2018 JO40_09105 29a25007073b5d70e7bb93d154e8ae12 118 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 7 75 1.6E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO40_09105 29a25007073b5d70e7bb93d154e8ae12 118 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 6.7E-8 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO40_09105 29a25007073b5d70e7bb93d154e8ae12 118 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 6.7E-8 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO40_09105 29a25007073b5d70e7bb93d154e8ae12 118 Pfam PF03840 Preprotein translocase SecG subunit 8 74 6.1E-18 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO40_07135 00a120adc710400edd6389128e4a18c2 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 5.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_07135 00a120adc710400edd6389128e4a18c2 288 Gene3D G3DSA:3.40.190.10 164 264 2.6E-10 T 14-10-2018 JO40_07135 00a120adc710400edd6389128e4a18c2 288 SUPERFAMILY SSF46785 1 86 4.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_07135 00a120adc710400edd6389128e4a18c2 288 Gene3D G3DSA:1.10.10.10 1 89 6.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_07135 00a120adc710400edd6389128e4a18c2 288 Gene3D G3DSA:3.40.190.10 125 274 2.6E-10 T 14-10-2018 JO40_07135 00a120adc710400edd6389128e4a18c2 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_07135 00a120adc710400edd6389128e4a18c2 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_07135 00a120adc710400edd6389128e4a18c2 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO40_07135 00a120adc710400edd6389128e4a18c2 288 Pfam PF03466 LysR substrate binding domain 125 275 3.7E-9 T 14-10-2018 IPR005119 LysR, substrate-binding JO40_07135 00a120adc710400edd6389128e4a18c2 288 SUPERFAMILY SSF53850 125 275 8.14E-8 T 14-10-2018 JO40_12390 724a5370a19c46e1cba709f881a1af40 585 Gene3D G3DSA:3.40.50.300 331 584 5.9E-84 T 14-10-2018 JO40_12390 724a5370a19c46e1cba709f881a1af40 585 SUPERFAMILY SSF90123 10 321 2.22E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_12390 724a5370a19c46e1cba709f881a1af40 585 Gene3D G3DSA:1.20.1560.10 4 321 1.7E-15 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_12390 724a5370a19c46e1cba709f881a1af40 585 Pfam PF00664 ABC transporter transmembrane region 49 294 1.4E-8 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_12390 724a5370a19c46e1cba709f881a1af40 585 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_12390 724a5370a19c46e1cba709f881a1af40 585 SMART SM00382 367 553 6.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12390 724a5370a19c46e1cba709f881a1af40 585 SUPERFAMILY SSF52540 331 575 1.22E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12390 724a5370a19c46e1cba709f881a1af40 585 Pfam PF00005 ABC transporter 359 507 4.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05270 f951aaed7896711e3ef33e4e0a3842bb 656 SUPERFAMILY SSF53474 399 655 5.99E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_05270 f951aaed7896711e3ef33e4e0a3842bb 656 Pfam PF00326 Prolyl oligopeptidase family 445 655 2.2E-48 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JO40_05270 f951aaed7896711e3ef33e4e0a3842bb 656 Gene3D G3DSA:2.120.10.30 4 166 2.1E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JO40_05270 f951aaed7896711e3ef33e4e0a3842bb 656 SUPERFAMILY SSF82171 14 385 5.23E-15 T 14-10-2018 JO40_05270 f951aaed7896711e3ef33e4e0a3842bb 656 Gene3D G3DSA:3.40.50.1820 401 656 7.5E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_11490 1ea764b54862b639ad6b40d690a9c18c 91 PIRSF PIRSF002736 1 91 3.5E-36 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 JO40_11490 1ea764b54862b639ad6b40d690a9c18c 91 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 90 1.3E-29 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 JO40_11490 1ea764b54862b639ad6b40d690a9c18c 91 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 88 1.8E-30 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein JO40_11490 1ea764b54862b639ad6b40d690a9c18c 91 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 90 22.052 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 JO40_11490 1ea764b54862b639ad6b40d690a9c18c 91 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 84 2.0E-29 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 JO40_08735 46bf9c63dea3c7909cc218bcbf220b8d 361 Gene3D G3DSA:3.60.150.10 3 361 2.9E-118 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO40_08735 46bf9c63dea3c7909cc218bcbf220b8d 361 Pfam PF01264 Chorismate synthase 10 354 1.5E-115 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO40_08735 46bf9c63dea3c7909cc218bcbf220b8d 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 358 5.1E-93 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO40_08735 46bf9c63dea3c7909cc218bcbf220b8d 361 SUPERFAMILY SSF103263 4 356 8.24E-104 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO40_08735 46bf9c63dea3c7909cc218bcbf220b8d 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 361 31.515 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO40_08735 46bf9c63dea3c7909cc218bcbf220b8d 361 PIRSF PIRSF001456 3 361 3.1E-121 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO40_08735 46bf9c63dea3c7909cc218bcbf220b8d 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 125 141 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO40_06825 962c6cceae62511192fe52ff8f2c3ba7 623 SUPERFAMILY SSF52540 2 223 1.59E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06825 962c6cceae62511192fe52ff8f2c3ba7 623 Pfam PF00005 ABC transporter 22 167 2.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06825 962c6cceae62511192fe52ff8f2c3ba7 623 Gene3D G3DSA:3.40.50.300 1 279 5.9E-57 T 14-10-2018 JO40_06825 962c6cceae62511192fe52ff8f2c3ba7 623 SMART SM00382 31 214 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06825 962c6cceae62511192fe52ff8f2c3ba7 623 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_02300 b60c9de5fdae2e40c577795b7db83612 211 SUPERFAMILY SSF52166 1 206 2.09E-68 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02300 b60c9de5fdae2e40c577795b7db83612 211 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.773 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02300 b60c9de5fdae2e40c577795b7db83612 211 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 8.9E-68 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02300 b60c9de5fdae2e40c577795b7db83612 211 Gene3D G3DSA:3.40.1370.10 1 209 2.2E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02300 b60c9de5fdae2e40c577795b7db83612 211 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 1.6E-59 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 JO40_02545 479db0dae2a6d95874f91f76ebb66219 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 305 1.6E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_02545 479db0dae2a6d95874f91f76ebb66219 313 Gene3D G3DSA:1.10.3720.10 89 304 1.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily JO40_02545 479db0dae2a6d95874f91f76ebb66219 313 SUPERFAMILY SSF161098 92 288 7.98E-18 T 14-10-2018 IPR035906 MetI-like superfamily JO40_03125 acf5c75522898beaa7d2f16200e4db19 235 Pfam PF01841 Transglutaminase-like superfamily 28 133 5.4E-18 T 14-10-2018 IPR002931 Transglutaminase-like JO40_03125 acf5c75522898beaa7d2f16200e4db19 235 SUPERFAMILY SSF54001 17 138 6.17E-22 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO40_03125 acf5c75522898beaa7d2f16200e4db19 235 SMART SM00460 62 136 2.0E-6 T 14-10-2018 IPR002931 Transglutaminase-like JO40_03125 acf5c75522898beaa7d2f16200e4db19 235 Gene3D G3DSA:3.10.620.30 1 142 3.7E-18 T 14-10-2018 JO40_09720 58983a02947acbcd331c99fab50e6799 377 Gene3D G3DSA:3.40.50.970 177 376 5.1E-30 T 14-10-2018 JO40_09720 58983a02947acbcd331c99fab50e6799 377 Gene3D G3DSA:3.40.50.970 4 176 1.0E-12 T 14-10-2018 JO40_09720 58983a02947acbcd331c99fab50e6799 377 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 229 345 7.1E-19 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JO40_09720 58983a02947acbcd331c99fab50e6799 377 SUPERFAMILY SSF52518 184 371 1.18E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_09720 58983a02947acbcd331c99fab50e6799 377 SUPERFAMILY SSF52518 4 171 3.75E-21 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO40_09720 58983a02947acbcd331c99fab50e6799 377 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 171 2.3E-17 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JO40_09720 58983a02947acbcd331c99fab50e6799 377 TIGRFAM TIGR03297 Ppyr-DeCO2ase: phosphonopyruvate decarboxylase 16 373 4.1E-168 T 14-10-2018 IPR017684 Phosphonopyruvate decarboxylase GO:0032923|GO:0033980 KEGG: 00440+4.1.1.82|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7510|MetaCyc: PWY-7769 JO40_07145 aa4bb16db6cd21e39bfff5b8a8a50de5 367 Gene3D G3DSA:3.40.50.1820 37 367 4.3E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_07145 aa4bb16db6cd21e39bfff5b8a8a50de5 367 SUPERFAMILY SSF53474 89 363 6.34E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_07125 dbf0b950c426d233c4c99e160ac3baf1 211 Pfam PF03358 NADPH-dependent FMN reductase 3 127 5.6E-20 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JO40_07125 dbf0b950c426d233c4c99e160ac3baf1 211 SUPERFAMILY SSF52218 1 209 9.94E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_07125 dbf0b950c426d233c4c99e160ac3baf1 211 Gene3D G3DSA:3.40.50.360 1 196 2.6E-33 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_11280 7c867343d381b47a89da8a7eb3d7c151 219 Gene3D G3DSA:3.60.21.10 22 219 1.0E-35 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO40_11280 7c867343d381b47a89da8a7eb3d7c151 219 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 28 208 2.2E-24 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 JO40_11280 7c867343d381b47a89da8a7eb3d7c151 219 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 28 209 2.3E-24 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 JO40_11280 7c867343d381b47a89da8a7eb3d7c151 219 SUPERFAMILY SSF56300 28 209 2.41E-33 T 14-10-2018 JO40_05630 3616f9bba328af930f46cd35cc1c1eee 208 SUPERFAMILY SSF109604 21 197 1.3E-41 T 14-10-2018 JO40_05630 3616f9bba328af930f46cd35cc1c1eee 208 Gene3D G3DSA:1.10.3210.10 12 208 1.7E-53 T 14-10-2018 JO40_05630 3616f9bba328af930f46cd35cc1c1eee 208 Pfam PF13023 HD domain 29 190 6.0E-46 T 14-10-2018 IPR006674 HD domain JO40_01690 961ce2d051502b63399d5d7b8340e924 226 Gene3D G3DSA:1.25.40.10 2 106 7.3E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 SMART SM00028 36 69 0.35 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 SMART SM00028 176 209 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 SMART SM00028 141 175 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 SMART SM00028 107 140 1.3E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 Pfam PF13432 Tetratricopeptide repeat 113 176 8.3E-7 T 14-10-2018 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 Gene3D G3DSA:1.25.40.10 107 225 8.5E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 Pfam PF13176 Tetratricopeptide repeat 41 68 1.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_01690 961ce2d051502b63399d5d7b8340e924 226 SUPERFAMILY SSF48452 6 212 3.11E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10375 16e8d5937dd1d88400b15a08c9d3b8bb 366 Pfam PF00535 Glycosyl transferase family 2 57 146 3.4E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO40_10375 16e8d5937dd1d88400b15a08c9d3b8bb 366 SUPERFAMILY SSF53448 58 284 1.75E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 Gene3D G3DSA:3.30.1140.32 110 210 2.6E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 Pfam PF00189 Ribosomal protein S3, C-terminal domain 122 204 4.1E-36 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 213 36.554 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 Pfam PF07650 KH domain 48 112 1.1E-15 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 SUPERFAMILY SSF54814 2 108 8.37E-34 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 Gene3D G3DSA:3.30.300.20 17 109 7.0E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 SUPERFAMILY SSF54821 110 206 9.16E-34 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 211 1.4E-90 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 SMART SM00322 62 127 0.0019 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JO40_02275 2667bf2c268630a0c3727f5bc38b7d06 239 ProSitePatterns PS00548 Ribosomal protein S3 signature. 165 199 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 Gene3D G3DSA:4.10.910.10 72 121 2.0E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 PIRSF PIRSF002134 1 121 2.2E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 9.5E-27 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 24.62 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 Gene3D G3DSA:1.10.8.50 1 71 1.7E-26 T 14-10-2018 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 SUPERFAMILY SSF46946 2 120 1.62E-41 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.1E-52 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02205 88f5ce7c9c43071fe905dabfcb7e7922 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_05010 385b212aa5646345f2af592ce163eebb 945 SUPERFAMILY SSF52540 220 460 4.07E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05010 385b212aa5646345f2af592ce163eebb 945 SUPERFAMILY SSF52980 644 852 6.97E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO40_05010 385b212aa5646345f2af592ce163eebb 945 Pfam PF12705 PD-(D/E)XK nuclease superfamily 645 939 2.0E-22 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JO40_04210 00c9d234e316517470aa750a5cd2427e 635 Pfam PF00664 ABC transporter transmembrane region 33 304 4.4E-51 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_04210 00c9d234e316517470aa750a5cd2427e 635 SUPERFAMILY SSF90123 16 348 4.45E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04210 00c9d234e316517470aa750a5cd2427e 635 SMART SM00382 421 607 5.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04210 00c9d234e316517470aa750a5cd2427e 635 Gene3D G3DSA:3.40.50.300 392 633 1.5E-82 T 14-10-2018 JO40_04210 00c9d234e316517470aa750a5cd2427e 635 Gene3D G3DSA:1.20.1560.10 2 351 1.6E-93 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04210 00c9d234e316517470aa750a5cd2427e 635 Pfam PF00005 ABC transporter 412 561 4.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04210 00c9d234e316517470aa750a5cd2427e 635 ProSitePatterns PS00211 ABC transporters family signature. 533 547 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_04210 00c9d234e316517470aa750a5cd2427e 635 SUPERFAMILY SSF52540 385 629 2.83E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 SUPERFAMILY SSF57770 138 172 2.88E-11 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 Gene3D G3DSA:3.40.50.620 5 381 1.2E-166 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 577 37.374 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 SUPERFAMILY SSF52374 2 386 1.31E-90 T 14-10-2018 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 SUPERFAMILY SSF50249 625 734 1.81E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 Pfam PF09334 tRNA synthetases class I (M) 5 398 2.9E-158 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 522 1.6E-171 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 Gene3D G3DSA:2.20.28.20 138 172 1.2E-166 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 Gene3D G3DSA:2.40.50.140 618 789 7.7E-34 T 14-10-2018 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 5.9E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 5.9E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 5.9E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 5.9E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 5.9E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 386 397 5.9E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 Pfam PF01588 Putative tRNA binding domain 628 716 1.8E-24 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 SUPERFAMILY SSF47323 387 522 8.04E-26 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_00310 9515c7e0e5e6f4869ddbb6dcba40f288 793 Gene3D G3DSA:1.10.730.10 382 578 6.2E-30 T 14-10-2018 JO40_04705 ce30cb67c7367e9ed39a1d5eb67566d6 478 Gene3D G3DSA:3.20.20.70 146 314 5.0E-185 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_04705 ce30cb67c7367e9ed39a1d5eb67566d6 478 Gene3D G3DSA:3.20.140.10 6 466 5.0E-185 T 14-10-2018 JO40_04705 ce30cb67c7367e9ed39a1d5eb67566d6 478 SUPERFAMILY SSF51690 134 472 6.18E-115 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 JO40_04705 ce30cb67c7367e9ed39a1d5eb67566d6 478 PIRSF PIRSF000484 1 475 8.2E-158 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 JO40_04705 ce30cb67c7367e9ed39a1d5eb67566d6 478 SUPERFAMILY SSF54675 2 133 7.46E-47 T 14-10-2018 JO40_04705 ce30cb67c7367e9ed39a1d5eb67566d6 478 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 461 1.3E-188 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 JO40_04705 ce30cb67c7367e9ed39a1d5eb67566d6 478 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 150 363 2.4E-9 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 SUPERFAMILY SSF52540 217 491 8.24E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 SUPERFAMILY SSF52540 386 671 1.56E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 SMART SM00487 253 476 2.2E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 Gene3D G3DSA:3.40.50.300 460 697 3.5E-45 T 14-10-2018 JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 Pfam PF11867 Domain of unknown function (DUF3387) 699 1016 7.2E-96 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 Pfam PF04851 Type III restriction enzyme, res subunit 260 441 9.8E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 202 9.4E-36 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 Gene3D G3DSA:3.40.50.300 258 459 6.9E-48 T 14-10-2018 JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 Gene3D G3DSA:3.90.1570.50 93 251 2.7E-29 T 14-10-2018 JO40_06675 bc25f8797a41afa6278c1e2e96f892c4 1056 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 689 1.2E-178 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 JO40_09565 b67d8886d31c7f1178bd679bc88ab78e 611 SUPERFAMILY SSF58104 316 568 5.75E-46 T 14-10-2018 JO40_09565 b67d8886d31c7f1178bd679bc88ab78e 611 Gene3D G3DSA:1.10.287.950 288 594 3.1E-46 T 14-10-2018 JO40_09565 b67d8886d31c7f1178bd679bc88ab78e 611 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 385 536 1.8E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_09565 b67d8886d31c7f1178bd679bc88ab78e 611 SMART SM00283 321 568 7.8E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 3.3E-4 T 14-10-2018 JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 SUPERFAMILY SSF51735 4 245 1.85E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 Gene3D G3DSA:3.40.50.720 1 246 1.1E-77 T 14-10-2018 JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 6.2E-90 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_02730 dc24f1e6549e55eeb2877eb649ca0e65 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.3E-63 T 14-10-2018 JO40_07265 44024c3bfc7dd55306399b1a8ce14479 387 SUPERFAMILY SSF55166 166 296 3.92E-19 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JO40_07265 44024c3bfc7dd55306399b1a8ce14479 387 Gene3D G3DSA:3.30.1380.10 157 289 3.4E-16 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JO40_07265 44024c3bfc7dd55306399b1a8ce14479 387 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 214 290 1.1E-17 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 JO40_12440 8cb0a4be8608aff0baad135da48534a6 286 Pfam PF00892 EamA-like transporter family 146 280 1.4E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_12440 8cb0a4be8608aff0baad135da48534a6 286 Pfam PF00892 EamA-like transporter family 5 136 1.0E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_12440 8cb0a4be8608aff0baad135da48534a6 286 SUPERFAMILY SSF103481 39 136 1.07E-10 T 14-10-2018 JO40_12440 8cb0a4be8608aff0baad135da48534a6 286 SUPERFAMILY SSF103481 181 280 6.47E-10 T 14-10-2018 JO40_13015 06c531d427d2ff0ae208e779c2dc966e 93 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 91 26.446 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 JO40_13015 06c531d427d2ff0ae208e779c2dc966e 93 Pfam PF04026 SpoVG 1 81 1.9E-33 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 JO40_13015 06c531d427d2ff0ae208e779c2dc966e 93 Gene3D G3DSA:3.30.1120.40 1 93 1.4E-34 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 JO40_13015 06c531d427d2ff0ae208e779c2dc966e 93 SUPERFAMILY SSF160537 1 83 1.31E-31 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 JO40_08590 216ab806c0fbaa20bdc487ae95935fee 209 SUPERFAMILY SSF101473 1 206 3.01E-42 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JO40_08590 216ab806c0fbaa20bdc487ae95935fee 209 Pfam PF02734 DAK2 domain 33 202 4.7E-37 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JO40_08590 216ab806c0fbaa20bdc487ae95935fee 209 Gene3D G3DSA:1.25.40.340 1 208 1.6E-45 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JO40_08590 216ab806c0fbaa20bdc487ae95935fee 209 SMART SM01120 31 204 5.0E-44 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JO40_01475 99a443402fa14dbf35ad901cb3affb25 168 Pfam PF00583 Acetyltransferase (GNAT) family 51 145 3.2E-13 T 14-10-2018 IPR000182 GNAT domain JO40_01475 99a443402fa14dbf35ad901cb3affb25 168 SUPERFAMILY SSF55729 1 152 1.44E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_01475 99a443402fa14dbf35ad901cb3affb25 168 Gene3D G3DSA:3.40.630.30 1 166 7.9E-32 T 14-10-2018 JO40_04765 776a358aebb6cad488ed9b6500c1ce9f 286 PIRSF PIRSF029271 2 286 9.5E-142 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JO40_04765 776a358aebb6cad488ed9b6500c1ce9f 286 Pfam PF01680 SOR/SNZ family 6 206 4.6E-105 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JO40_04765 776a358aebb6cad488ed9b6500c1ce9f 286 Gene3D G3DSA:3.20.20.70 1 285 4.1E-141 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_04765 776a358aebb6cad488ed9b6500c1ce9f 286 SUPERFAMILY SSF51366 12 261 3.11E-64 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JO40_04765 776a358aebb6cad488ed9b6500c1ce9f 286 ProSitePatterns PS01235 PdxS/SNZ family signature. 199 217 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JO40_04765 776a358aebb6cad488ed9b6500c1ce9f 286 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 3 286 48.423 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JO40_04765 776a358aebb6cad488ed9b6500c1ce9f 286 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 280 1.4E-142 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JO40_07890 fe65577db84a98f7b30909c14d9bf62c 265 PIRSF PIRSF004789 4 265 8.1E-97 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like JO40_07890 fe65577db84a98f7b30909c14d9bf62c 265 SUPERFAMILY SSF56300 5 263 2.98E-61 T 14-10-2018 JO40_07890 fe65577db84a98f7b30909c14d9bf62c 265 Pfam PF13277 YmdB-like protein 10 261 2.1E-88 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like JO40_07890 fe65577db84a98f7b30909c14d9bf62c 265 Gene3D G3DSA:3.60.21.10 1 265 1.2E-90 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 Gene3D G3DSA:3.90.110.10 147 315 1.7E-60 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 174 180 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 144 1.2E-39 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 315 41.392 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 SUPERFAMILY SSF56327 145 311 1.21E-53 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 Gene3D G3DSA:3.40.50.720 1 146 9.5E-51 T 14-10-2018 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 PIRSF PIRSF000102 2 315 8.4E-106 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 SUPERFAMILY SSF51735 4 144 3.29E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 3.6E-40 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 3.6E-40 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 3.6E-40 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 3.6E-40 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 3.6E-40 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 309 5.5E-110 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 JO40_07225 2f0f6e9862808e2491b4e08e27a8ffad 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 312 1.8E-28 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 JO40_09320 bbe627a4e39b8a1a05e23e8ace90d269 60 SUPERFAMILY SSF54786 1 59 5.1E-20 T 14-10-2018 JO40_09320 bbe627a4e39b8a1a05e23e8ace90d269 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 58 6.1E-21 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 JO40_09320 bbe627a4e39b8a1a05e23e8ace90d269 60 Gene3D G3DSA:3.30.920.30 1 58 2.9E-21 T 14-10-2018 IPR038570 HicA superfamily JO40_06525 e9ee5a67cd6f7ef2417c971c9a8f51be 93 SMART SM00530 15 70 1.2E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_06525 e9ee5a67cd6f7ef2417c971c9a8f51be 93 Gene3D G3DSA:1.10.260.40 13 92 3.9E-21 T 14-10-2018 JO40_06525 e9ee5a67cd6f7ef2417c971c9a8f51be 93 SUPERFAMILY SSF47413 11 76 7.24E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_06525 e9ee5a67cd6f7ef2417c971c9a8f51be 93 Pfam PF01381 Helix-turn-helix 16 69 2.8E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_08645 944a2ed8c9668aa4440049e1e389e234 148 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 9 140 13.353 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 JO40_08645 944a2ed8c9668aa4440049e1e389e234 148 Pfam PF02576 RimP N-terminal domain 15 84 2.7E-14 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal JO40_08645 944a2ed8c9668aa4440049e1e389e234 148 Gene3D G3DSA:3.30.300.70 11 82 1.5E-9 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily JO40_08645 944a2ed8c9668aa4440049e1e389e234 148 SUPERFAMILY SSF75420 11 85 2.48E-14 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily JO40_08645 944a2ed8c9668aa4440049e1e389e234 148 Pfam PF17384 RimP C-terminal SH3 domain 92 145 4.1E-5 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal JO40_08925 e83b69db2826d914d93766aee2646355 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 810 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JO40_08925 e83b69db2826d914d93766aee2646355 815 Gene3D G3DSA:3.40.50.2000 462 795 0.0 T 14-10-2018 JO40_08925 e83b69db2826d914d93766aee2646355 815 Pfam PF00343 Carbohydrate phosphorylase 100 810 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JO40_08925 e83b69db2826d914d93766aee2646355 815 Gene3D G3DSA:3.40.50.2000 19 811 0.0 T 14-10-2018 JO40_08925 e83b69db2826d914d93766aee2646355 815 SUPERFAMILY SSF53756 4 813 5.34E-300 T 14-10-2018 JO40_08925 e83b69db2826d914d93766aee2646355 815 PIRSF PIRSF000460 2 815 1.6E-251 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JO40_04775 fd6081c4c5c6b382cca043fff2766eed 235 Gene3D G3DSA:3.40.50.620 3 233 5.0E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_04775 fd6081c4c5c6b382cca043fff2766eed 235 PIRSF PIRSF004976 3 235 2.4E-49 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 JO40_04775 fd6081c4c5c6b382cca043fff2766eed 235 Pfam PF01171 PP-loop family 26 180 9.7E-13 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JO40_04775 fd6081c4c5c6b382cca043fff2766eed 235 SUPERFAMILY SSF52402 4 206 9.14E-38 T 14-10-2018 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 1.4E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 PRINTS PR01466 Bacterial arginine deiminase signature 153 171 1.4E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 PRINTS PR01466 Bacterial arginine deiminase signature 181 196 1.4E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 1.4E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 1.4E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 1.4E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 PIRSF PIRSF006356 1 409 8.8E-178 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 Hamap MF_00242 Arginine deiminase [arcA]. 1 409 43.529 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 Gene3D G3DSA:3.75.10.10 5 404 1.5E-152 T 14-10-2018 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 Gene3D G3DSA:1.10.3930.10 68 153 1.5E-152 T 14-10-2018 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 TIGRFAM TIGR01078 arcA: arginine deiminase 4 409 1.3E-155 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 Pfam PF02274 Amidinotransferase 18 406 3.6E-95 T 14-10-2018 JO40_04785 39f3fdab583ae4b72ffa6635df2ff694 410 SUPERFAMILY SSF55909 2 409 2.16E-130 T 14-10-2018 JO40_04100 4f316fe8041bfa32e77aef93963e7fca 1013 Pfam PF00271 Helicase conserved C-terminal domain 724 825 3.2E-5 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_04100 4f316fe8041bfa32e77aef93963e7fca 1013 Pfam PF04851 Type III restriction enzyme, res subunit 504 644 2.4E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_04100 4f316fe8041bfa32e77aef93963e7fca 1013 SMART SM00487 500 678 3.1E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_04100 4f316fe8041bfa32e77aef93963e7fca 1013 SUPERFAMILY SSF52540 411 662 4.15E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04100 4f316fe8041bfa32e77aef93963e7fca 1013 SUPERFAMILY SSF52540 501 872 3.55E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04100 4f316fe8041bfa32e77aef93963e7fca 1013 Gene3D G3DSA:3.40.50.300 496 672 2.4E-34 T 14-10-2018 JO40_04100 4f316fe8041bfa32e77aef93963e7fca 1013 Gene3D G3DSA:3.40.50.300 686 912 1.5E-32 T 14-10-2018 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 331 5.7E-156 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 SUPERFAMILY SSF53067 7 144 4.1E-35 T 14-10-2018 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 Gene3D G3DSA:3.90.640.10 183 256 4.6E-120 T 14-10-2018 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 7.2E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 7.2E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 7.2E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 7.2E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 7.2E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 Gene3D G3DSA:3.30.420.40 11 324 4.6E-120 T 14-10-2018 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 Pfam PF06723 MreB/Mbl protein 9 332 3.7E-140 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 Gene3D G3DSA:3.30.420.40 151 314 4.6E-120 T 14-10-2018 JO40_12280 9a82720336758fb359bbbebfbee7a234 344 SUPERFAMILY SSF53067 147 328 7.66E-47 T 14-10-2018 JO40_03420 c101cb97a0de3d0c42b96236046859ce 257 Pfam PF06182 ABC-2 family transporter protein 32 256 8.6E-33 T 14-10-2018 IPR010390 Protein of unknown function DUF990 JO40_01410 ac1d9c339636c68c7a913444019e0fa9 557 Gene3D G3DSA:3.30.300.30 431 538 6.3E-12 T 14-10-2018 JO40_01410 ac1d9c339636c68c7a913444019e0fa9 557 SUPERFAMILY SSF56801 11 536 2.35E-110 T 14-10-2018 JO40_01410 ac1d9c339636c68c7a913444019e0fa9 557 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 530 7.5E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JO40_01410 ac1d9c339636c68c7a913444019e0fa9 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 14-10-2018 IPR020845 AMP-binding, conserved site JO40_01410 ac1d9c339636c68c7a913444019e0fa9 557 Pfam PF00501 AMP-binding enzyme 19 432 2.2E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO40_12910 ace681967d0372132681d78944b51c7e 535 Pfam PF08011 PD-(D/E)XK nuclease superfamily 437 530 3.8E-24 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_12910 ace681967d0372132681d78944b51c7e 535 Gene3D G3DSA:3.40.50.300 17 213 3.1E-5 T 14-10-2018 JO40_12910 ace681967d0372132681d78944b51c7e 535 Pfam PF09820 Predicted AAA-ATPase 8 291 2.4E-104 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 SUPERFAMILY SSF52540 14 241 2.85E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 Pfam PF12002 MgsA AAA+ ATPase C terminal 276 435 9.8E-64 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 Pfam PF16193 AAA C-terminal domain 192 275 2.0E-26 T 14-10-2018 IPR032423 AAA C-terminal domain JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 Gene3D G3DSA:3.40.50.300 7 168 1.1E-44 T 14-10-2018 JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 Gene3D G3DSA:1.20.272.10 249 353 6.4E-45 T 14-10-2018 JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 Gene3D G3DSA:1.10.8.60 169 232 6.7E-17 T 14-10-2018 JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 162 1.4E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 SUPERFAMILY SSF48019 260 432 7.37E-66 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 SMART SM00382 52 169 1.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05395 b0a3090e1e7824e05c71c16f634120a6 441 Gene3D G3DSA:1.10.3710.10 356 441 6.7E-26 T 14-10-2018 JO40_11920 f626128f1ccaf7b4100112f6b7ba62df 333 Gene3D G3DSA:3.90.1640.10 13 217 1.7E-47 T 14-10-2018 JO40_11920 f626128f1ccaf7b4100112f6b7ba62df 333 Gene3D G3DSA:3.10.310.30 218 333 3.1E-24 T 14-10-2018 JO40_11920 f626128f1ccaf7b4100112f6b7ba62df 333 SUPERFAMILY SSF64182 25 328 1.7E-59 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO40_11920 f626128f1ccaf7b4100112f6b7ba62df 333 Pfam PF02272 DHHA1 domain 196 328 3.2E-12 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JO40_11920 f626128f1ccaf7b4100112f6b7ba62df 333 Pfam PF01368 DHH family 28 169 6.6E-13 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_08355 8bfffd4b8d0dc39327d3735dcf71393a 346 SUPERFAMILY SSF161098 115 317 3.92E-15 T 14-10-2018 IPR035906 MetI-like superfamily JO40_08355 8bfffd4b8d0dc39327d3735dcf71393a 346 Gene3D G3DSA:1.10.3720.10 108 336 2.4E-16 T 14-10-2018 IPR035906 MetI-like superfamily JO40_08355 8bfffd4b8d0dc39327d3735dcf71393a 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 341 2.8E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_10995 e7f3f6ac4a9e457391dfc9f249a395bd 398 Pfam PF13023 HD domain 196 375 8.6E-32 T 14-10-2018 IPR006674 HD domain JO40_10995 e7f3f6ac4a9e457391dfc9f249a395bd 398 SUPERFAMILY SSF109604 178 391 6.8E-30 T 14-10-2018 JO40_10995 e7f3f6ac4a9e457391dfc9f249a395bd 398 Gene3D G3DSA:1.10.3210.10 191 388 3.2E-30 T 14-10-2018 JO40_10995 e7f3f6ac4a9e457391dfc9f249a395bd 398 Gene3D G3DSA:1.10.3210.10 9 190 2.7E-19 T 14-10-2018 JO40_10995 e7f3f6ac4a9e457391dfc9f249a395bd 398 SUPERFAMILY SSF109604 40 157 4.08E-5 T 14-10-2018 JO40_11085 ecdd168e50488405fedf9d07bc93b8dc 320 Pfam PF12706 Beta-lactamase superfamily domain 75 279 3.2E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_11085 ecdd168e50488405fedf9d07bc93b8dc 320 Gene3D G3DSA:3.60.15.10 54 319 2.3E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_11085 ecdd168e50488405fedf9d07bc93b8dc 320 SUPERFAMILY SSF56281 1 315 1.44E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_11085 ecdd168e50488405fedf9d07bc93b8dc 320 SMART SM00849 61 254 2.5E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_02850 a29210bb4930dba38c1f4676e4b40a9c 103 SUPERFAMILY SSF141000 7 98 6.41E-14 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 JO40_02850 a29210bb4930dba38c1f4676e4b40a9c 103 Gene3D G3DSA:1.10.20.60 5 98 5.0E-10 T 14-10-2018 JO40_01750 6959a8445624e12da8154230d40c9de6 747 Pfam PF00270 DEAD/DEAH box helicase 26 194 1.6E-23 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO40_01750 6959a8445624e12da8154230d40c9de6 747 Gene3D G3DSA:3.40.50.300 254 406 3.0E-26 T 14-10-2018 JO40_01750 6959a8445624e12da8154230d40c9de6 747 Pfam PF00271 Helicase conserved C-terminal domain 270 376 5.5E-16 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_01750 6959a8445624e12da8154230d40c9de6 747 SUPERFAMILY SSF52540 33 387 6.05E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01750 6959a8445624e12da8154230d40c9de6 747 SMART SM00487 19 223 6.1E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_01750 6959a8445624e12da8154230d40c9de6 747 SMART SM00490 288 376 4.3E-14 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_01750 6959a8445624e12da8154230d40c9de6 747 Gene3D G3DSA:3.40.50.300 3 217 4.8E-45 T 14-10-2018 JO40_02380 237e4b034537873c2c6589e5bbd4a103 245 SUPERFAMILY SSF55120 7 242 4.96E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_02380 237e4b034537873c2c6589e5bbd4a103 245 Gene3D G3DSA:3.30.2350.10 6 244 1.8E-64 T 14-10-2018 JO40_02380 237e4b034537873c2c6589e5bbd4a103 245 Pfam PF00849 RNA pseudouridylate synthase 14 167 1.9E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_09285 acd814038c066bf2afbcaaf51f3448fa 549 SUPERFAMILY SSF109755 349 544 7.95E-21 T 14-10-2018 JO40_09285 acd814038c066bf2afbcaaf51f3448fa 549 Gene3D G3DSA:1.20.58.220 336 547 9.5E-7 T 14-10-2018 IPR038078 PhoU-like domain superfamily JO40_09285 acd814038c066bf2afbcaaf51f3448fa 549 Pfam PF01895 PhoU domain 351 436 2.3E-6 T 14-10-2018 IPR026022 PhoU domain JO40_09285 acd814038c066bf2afbcaaf51f3448fa 549 Pfam PF01895 PhoU domain 488 544 8.9E-5 T 14-10-2018 IPR026022 PhoU domain JO40_09285 acd814038c066bf2afbcaaf51f3448fa 549 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 319 3.2E-101 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 JO40_09285 acd814038c066bf2afbcaaf51f3448fa 549 Pfam PF02690 Na+/Pi-cotransporter 179 259 1.3E-10 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 JO40_09285 acd814038c066bf2afbcaaf51f3448fa 549 Pfam PF02690 Na+/Pi-cotransporter 16 155 4.7E-47 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 JO40_05305 93b899e840753f467daaf07a5b323158 329 Pfam PF06089 L-asparaginase II 7 326 3.3E-102 T 14-10-2018 IPR010349 L-asparaginase II JO40_09725 b30ff0167c456150c7258cee6e280402 616 Gene3D G3DSA:3.40.640.10 261 510 7.0E-98 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_09725 b30ff0167c456150c7258cee6e280402 616 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 251 616 110.657 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 JO40_09725 b30ff0167c456150c7258cee6e280402 616 Gene3D G3DSA:3.90.1150.10 252 608 7.0E-98 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_09725 b30ff0167c456150c7258cee6e280402 616 SUPERFAMILY SSF53448 1 268 5.2E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09725 b30ff0167c456150c7258cee6e280402 616 Pfam PF12804 MobA-like NTP transferase domain 5 106 7.5E-10 T 14-10-2018 IPR025877 MobA-like NTP transferase JO40_09725 b30ff0167c456150c7258cee6e280402 616 Pfam PF00266 Aminotransferase class-V 306 544 1.1E-24 T 14-10-2018 IPR000192 Aminotransferase class V domain JO40_09725 b30ff0167c456150c7258cee6e280402 616 Gene3D G3DSA:3.90.550.10 3 234 1.2E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09725 b30ff0167c456150c7258cee6e280402 616 SUPERFAMILY SSF53383 251 612 1.22E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_09725 b30ff0167c456150c7258cee6e280402 616 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 251 608 1.4E-110 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 JO40_03645 e0474001d2cbddce31a13e69b9e8867a 81 SMART SM00834 1 41 2.6E-21 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JO40_03645 e0474001d2cbddce31a13e69b9e8867a 81 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 8.5E-22 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JO40_03645 e0474001d2cbddce31a13e69b9e8867a 81 Pfam PF09723 Zinc ribbon domain 1 40 1.6E-19 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JO40_05635 2485579d4e2f95dc12136c7d77bc7ac7 224 Pfam PF14358 Domain of unknown function (DUF4405) 73 131 1.9E-9 T 14-10-2018 IPR025517 Domain of unknown function DUF4405 JO40_11210 b85a40611f747ea43d1085fa1f93e985 391 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JO40_11210 b85a40611f747ea43d1085fa1f93e985 391 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JO40_11210 b85a40611f747ea43d1085fa1f93e985 391 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 365 3.2E-98 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JO40_11210 b85a40611f747ea43d1085fa1f93e985 391 Gene3D G3DSA:3.40.50.1970 1 184 4.5E-52 T 14-10-2018 JO40_11210 b85a40611f747ea43d1085fa1f93e985 391 Gene3D G3DSA:1.20.1090.10 185 391 1.8E-48 T 14-10-2018 JO40_11210 b85a40611f747ea43d1085fa1f93e985 391 SUPERFAMILY SSF56796 2 389 3.4E-111 T 14-10-2018 JO40_08205 3cc361490eb89e1d05e01ce69c33b14e 575 Pfam PF01973 Protein of unknown function DUF115 202 367 3.8E-26 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 SUPERFAMILY SSF54631 199 332 2.4E-26 T 14-10-2018 JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 Pfam PF00571 CBS domain 274 322 3.8E-4 T 14-10-2018 IPR000644 CBS domain JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 Pfam PF00571 CBS domain 206 261 1.2E-7 T 14-10-2018 IPR000644 CBS domain JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 Pfam PF01595 Domain of unknown function DUF21 12 187 2.7E-36 T 14-10-2018 IPR002550 CNNM, transmembrane domain JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 Gene3D G3DSA:3.10.580.10 184 332 9.2E-43 T 14-10-2018 JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 Pfam PF03471 Transporter associated domain 344 411 2.3E-14 T 14-10-2018 IPR005170 Transporter-associated domain JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 SUPERFAMILY SSF56176 345 414 1.64E-13 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 SMART SM01091 342 420 1.5E-14 T 14-10-2018 IPR005170 Transporter-associated domain JO40_04840 1adf3908eb03fff5d65434d78a87572e 432 Gene3D G3DSA:3.30.465.10 333 417 4.2E-14 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO40_03860 28200fd2bbcdae81f579375e1978316a 413 SUPERFAMILY SSF51556 65 364 7.32E-78 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_03860 28200fd2bbcdae81f579375e1978316a 413 Gene3D G3DSA:2.30.40.10 14 401 3.2E-158 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO40_03860 28200fd2bbcdae81f579375e1978316a 413 TIGRFAM TIGR01224 hutI: imidazolonepropionase 27 401 3.3E-137 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_03860 28200fd2bbcdae81f579375e1978316a 413 SUPERFAMILY SSF51338 19 409 1.27E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO40_03860 28200fd2bbcdae81f579375e1978316a 413 Gene3D G3DSA:3.20.20.140 65 363 3.2E-158 T 14-10-2018 JO40_03860 28200fd2bbcdae81f579375e1978316a 413 Hamap MF_00372 Imidazolonepropionase [hutI]. 1 403 39.737 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JO40_03860 28200fd2bbcdae81f579375e1978316a 413 Pfam PF01979 Amidohydrolase family 61 403 2.4E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO40_04225 7f8817db2cf470b1e938429e9898b767 269 Pfam PF00753 Metallo-beta-lactamase superfamily 41 204 1.4E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_04225 7f8817db2cf470b1e938429e9898b767 269 Gene3D G3DSA:3.60.15.10 14 246 2.6E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_04225 7f8817db2cf470b1e938429e9898b767 269 SUPERFAMILY SSF56281 26 241 1.83E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_04225 7f8817db2cf470b1e938429e9898b767 269 SMART SM00849 41 231 2.6E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_11685 9c0e7a58bbbf74874052a3e8336f05d1 223 Pfam PF10016 Predicted secreted protein (DUF2259) 38 222 1.2E-21 T 14-10-2018 IPR018725 Protein of unknown function DUF2259, secreted JO40_11685 9c0e7a58bbbf74874052a3e8336f05d1 223 SUPERFAMILY SSF69304 25 122 6.54E-6 T 14-10-2018 JO40_02265 03b6ddf704fe10d5f0436cdd21c4bd4f 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 14.983 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02265 03b6ddf704fe10d5f0436cdd21c4bd4f 69 Gene3D G3DSA:1.10.287.310 1 67 4.0E-20 T 14-10-2018 JO40_02265 03b6ddf704fe10d5f0436cdd21c4bd4f 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 61 8.8E-14 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02265 03b6ddf704fe10d5f0436cdd21c4bd4f 69 SUPERFAMILY SSF46561 3 64 2.22E-16 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02265 03b6ddf704fe10d5f0436cdd21c4bd4f 69 Pfam PF00831 Ribosomal L29 protein 6 61 2.6E-17 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_08350 327e52aba018e790834077ab559e3f19 871 SUPERFAMILY SSF53850 37 391 9.05E-29 T 14-10-2018 JO40_08350 327e52aba018e790834077ab559e3f19 871 Gene3D G3DSA:3.10.105.10 95 364 3.5E-21 T 14-10-2018 JO40_08350 327e52aba018e790834077ab559e3f19 871 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 39 287 7.9E-16 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_08350 327e52aba018e790834077ab559e3f19 871 Gene3D G3DSA:3.40.190.10 39 373 3.5E-21 T 14-10-2018 JO40_05355 f96839821a949e13b155e8bdb8b29a0e 273 Pfam PF13189 Cytidylate kinase-like family 3 167 1.2E-34 T 14-10-2018 JO40_05355 f96839821a949e13b155e8bdb8b29a0e 273 Gene3D G3DSA:3.40.50.300 1 184 4.4E-39 T 14-10-2018 JO40_05220 870858c26c6483e47dcd830177941896 216 Gene3D G3DSA:2.60.120.1460 1 212 1.9E-52 T 14-10-2018 JO40_05220 870858c26c6483e47dcd830177941896 216 SUPERFAMILY SSF46785 145 208 1.53E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_05220 870858c26c6483e47dcd830177941896 216 Pfam PF00027 Cyclic nucleotide-binding domain 26 105 1.5E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_05220 870858c26c6483e47dcd830177941896 216 Pfam PF13545 Crp-like helix-turn-helix domain 149 214 2.0E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JO40_05220 870858c26c6483e47dcd830177941896 216 SUPERFAMILY SSF51206 2 139 1.83E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_01275 69156358b35b2ff8c119301fdff27504 216 Pfam PF13529 Peptidase_C39 like family 51 165 1.5E-8 T 14-10-2018 IPR039564 Peptidase C39-like JO40_01275 69156358b35b2ff8c119301fdff27504 216 Gene3D G3DSA:3.90.70.10 54 211 3.5E-9 T 14-10-2018 JO40_09090 a92d80de990cabcdc7f98891d7440b1b 155 Pfam PF02130 Uncharacterized protein family UPF0054 23 146 1.2E-31 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JO40_09090 a92d80de990cabcdc7f98891d7440b1b 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 117 127 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site JO40_09090 a92d80de990cabcdc7f98891d7440b1b 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 154 20.697 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JO40_09090 a92d80de990cabcdc7f98891d7440b1b 155 Gene3D G3DSA:3.40.390.30 5 150 1.3E-39 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 JO40_09090 a92d80de990cabcdc7f98891d7440b1b 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 147 8.8E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JO40_09090 a92d80de990cabcdc7f98891d7440b1b 155 SUPERFAMILY SSF55486 5 149 1.34E-36 T 14-10-2018 JO40_01685 0239c985aeae789df3da5dd96fc74af5 684 SUPERFAMILY SSF48452 37 100 1.61E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01685 0239c985aeae789df3da5dd96fc74af5 684 Gene3D G3DSA:3.40.50.410 470 637 3.7E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_01685 0239c985aeae789df3da5dd96fc74af5 684 SUPERFAMILY SSF53300 470 623 1.14E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_01685 0239c985aeae789df3da5dd96fc74af5 684 SUPERFAMILY SSF101898 150 395 3.92E-24 T 14-10-2018 JO40_01685 0239c985aeae789df3da5dd96fc74af5 684 Gene3D G3DSA:2.120.10.30 232 465 4.7E-23 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JO40_01685 0239c985aeae789df3da5dd96fc74af5 684 Gene3D G3DSA:2.120.10.30 128 231 1.4E-8 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JO40_08375 3bc9b19d478789f3329e7fb8ddcccc2f 406 Pfam PF00753 Metallo-beta-lactamase superfamily 34 173 1.8E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_08375 3bc9b19d478789f3329e7fb8ddcccc2f 406 PIRSF PIRSF005243 1 406 3.2E-118 T 14-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 JO40_08375 3bc9b19d478789f3329e7fb8ddcccc2f 406 Gene3D G3DSA:3.60.15.10 1 252 2.0E-79 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_08375 3bc9b19d478789f3329e7fb8ddcccc2f 406 SMART SM00849 35 232 2.6E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_08375 3bc9b19d478789f3329e7fb8ddcccc2f 406 Gene3D G3DSA:3.40.50.360 259 399 3.3E-29 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_08375 3bc9b19d478789f3329e7fb8ddcccc2f 406 SUPERFAMILY SSF56281 4 285 1.29E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_08375 3bc9b19d478789f3329e7fb8ddcccc2f 406 SUPERFAMILY SSF52218 260 403 4.49E-29 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_00820 7ac949831b019eda6a004dee995f406f 718 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00820 7ac949831b019eda6a004dee995f406f 718 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 7 707 1.7E-160 T 14-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 JO40_00820 7ac949831b019eda6a004dee995f406f 718 SUPERFAMILY SSF52540 465 710 2.39E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00820 7ac949831b019eda6a004dee995f406f 718 Gene3D G3DSA:3.40.50.300 468 717 4.9E-86 T 14-10-2018 JO40_00820 7ac949831b019eda6a004dee995f406f 718 Gene3D G3DSA:1.20.1560.10 144 461 2.0E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00820 7ac949831b019eda6a004dee995f406f 718 Pfam PF00664 ABC transporter transmembrane region 162 429 8.2E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_00820 7ac949831b019eda6a004dee995f406f 718 Gene3D G3DSA:3.90.70.10 1 142 2.9E-36 T 14-10-2018 JO40_00820 7ac949831b019eda6a004dee995f406f 718 SMART SM00382 500 692 3.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00820 7ac949831b019eda6a004dee995f406f 718 Pfam PF00005 ABC transporter 491 640 4.0E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00820 7ac949831b019eda6a004dee995f406f 718 Pfam PF03412 Peptidase C39 family 3 132 2.7E-28 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 JO40_00820 7ac949831b019eda6a004dee995f406f 718 SUPERFAMILY SSF90123 143 458 1.57E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04435 41218dd914e5130e2393596b29403974 2999 Gene3D G3DSA:2.60.40.4070 2914 2994 2.6E-10 T 14-10-2018 JO40_04435 41218dd914e5130e2393596b29403974 2999 Pfam PF13860 FlgD Ig-like domain 2929 2985 8.3E-9 T 14-10-2018 IPR025965 FlgD Ig-like domain JO40_11100 6c1dab6d2c2fc534d5db111b9019c0f4 370 SUPERFAMILY SSF53756 13 369 1.29E-70 T 14-10-2018 JO40_11100 6c1dab6d2c2fc534d5db111b9019c0f4 370 Gene3D G3DSA:3.40.50.2000 180 369 1.6E-39 T 14-10-2018 JO40_11100 6c1dab6d2c2fc534d5db111b9019c0f4 370 Pfam PF00534 Glycosyl transferases group 1 186 344 1.0E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO40_11100 6c1dab6d2c2fc534d5db111b9019c0f4 370 Pfam PF13439 Glycosyltransferase Family 4 15 165 7.3E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JO40_11100 6c1dab6d2c2fc534d5db111b9019c0f4 370 Gene3D G3DSA:3.40.50.2000 2 179 5.7E-14 T 14-10-2018 JO40_09380 0c76617103d5a22141ef127238bb8d77 262 Pfam PF06182 ABC-2 family transporter protein 34 261 3.3E-63 T 14-10-2018 IPR010390 Protein of unknown function DUF990 JO40_03695 16d43105ff9180a69159321f115a38eb 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_03695 16d43105ff9180a69159321f115a38eb 190 Gene3D G3DSA:1.10.357.10 2 188 7.5E-21 T 14-10-2018 JO40_03695 16d43105ff9180a69159321f115a38eb 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_03695 16d43105ff9180a69159321f115a38eb 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_03695 16d43105ff9180a69159321f115a38eb 190 SUPERFAMILY SSF46689 6 72 1.6E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_13310 56976d07a56fce2bda6790cc68255921 121 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 22 121 1.0E-14 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO40_13310 56976d07a56fce2bda6790cc68255921 121 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 118 8.5E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO40_13310 56976d07a56fce2bda6790cc68255921 121 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 11 121 12.481 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO40_13310 56976d07a56fce2bda6790cc68255921 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 86 102 6.0E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO40_13310 56976d07a56fce2bda6790cc68255921 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 51 67 6.0E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO40_13310 56976d07a56fce2bda6790cc68255921 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 107 120 6.0E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO40_01660 505bcf127bca6c91d0e6c21d8773fd3c 209 Gene3D G3DSA:2.30.30.840 2 67 2.1E-20 T 14-10-2018 JO40_01660 505bcf127bca6c91d0e6c21d8773fd3c 209 Gene3D G3DSA:1.20.58.1290 68 163 1.2E-22 T 14-10-2018 JO40_01660 505bcf127bca6c91d0e6c21d8773fd3c 209 SMART SM01058 6 116 1.6E-22 T 14-10-2018 IPR003711 CarD-like/TRCF domain JO40_01660 505bcf127bca6c91d0e6c21d8773fd3c 209 Pfam PF02559 CarD-like/TRCF domain 7 114 1.4E-14 T 14-10-2018 IPR003711 CarD-like/TRCF domain JO40_01660 505bcf127bca6c91d0e6c21d8773fd3c 209 SUPERFAMILY SSF141259 7 70 6.28E-12 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily JO40_06805 198a3fee2c1202c27ab75d0c6e03a570 81 Pfam PF00886 Ribosomal protein S16 8 67 8.8E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06805 198a3fee2c1202c27ab75d0c6e03a570 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 6.4E-32 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06805 198a3fee2c1202c27ab75d0c6e03a570 81 SUPERFAMILY SSF54565 2 78 7.59E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06805 198a3fee2c1202c27ab75d0c6e03a570 81 Gene3D G3DSA:3.30.1320.10 1 81 2.2E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06805 198a3fee2c1202c27ab75d0c6e03a570 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 77 24.732 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 Pfam PF00664 ABC transporter transmembrane region 19 291 1.2E-22 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 Gene3D G3DSA:3.40.50.300 322 575 7.1E-79 T 14-10-2018 JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 SUPERFAMILY SSF52540 333 568 1.46E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 Pfam PF00005 ABC transporter 351 499 1.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 SMART SM00382 360 562 6.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 SUPERFAMILY SSF90123 5 315 1.7E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08095 3b0860afb1bd5414ad1a80f0de9b382d 578 Gene3D G3DSA:1.20.1560.10 1 319 1.7E-32 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_09745 5961dc0ce2858fed0add3625b6538087 424 Pfam PF00005 ABC transporter 61 192 5.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09745 5961dc0ce2858fed0add3625b6538087 424 SMART SM00382 70 251 6.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09745 5961dc0ce2858fed0add3625b6538087 424 Pfam PF14524 Wzt C-terminal domain 285 397 2.7E-7 T 14-10-2018 IPR029439 Wzt, C-terminal JO40_09745 5961dc0ce2858fed0add3625b6538087 424 SUPERFAMILY SSF52540 56 252 5.98E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09745 5961dc0ce2858fed0add3625b6538087 424 Gene3D G3DSA:3.40.50.300 49 280 1.7E-45 T 14-10-2018 JO40_04180 8e45a433a71c6a39b86e19e41e82bca3 351 Gene3D G3DSA:3.20.20.210 1 338 2.1E-76 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_04180 8e45a433a71c6a39b86e19e41e82bca3 351 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 2 333 3.7E-73 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JO40_04180 8e45a433a71c6a39b86e19e41e82bca3 351 SUPERFAMILY SSF51726 1 334 1.74E-53 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SUPERFAMILY SSF48452 48 215 9.86E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Gene3D G3DSA:1.25.40.10 170 240 4.6E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Pfam PF13429 Tetratricopeptide repeat 213 474 1.9E-7 T 14-10-2018 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Pfam PF00515 Tetratricopeptide repeat 145 178 6.2E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Pfam PF00515 Tetratricopeptide repeat 115 144 7.7E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 111 144 5.2E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 179 212 0.016 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 213 246 0.045 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 77 110 0.025 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 417 450 0.074 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 145 178 6.9E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 43 76 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 247 280 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SMART SM00028 349 382 70.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Gene3D G3DSA:1.25.40.10 241 522 5.1E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Gene3D G3DSA:1.25.40.10 2 169 1.4E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Pfam PF13181 Tetratricopeptide repeat 182 211 0.0027 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 Pfam PF13181 Tetratricopeptide repeat 78 110 0.081 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06555 dc6fda9fb77118e1f64ce84e4daedcbc 959 SUPERFAMILY SSF48452 184 483 2.94E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_00865 5d1a80c48837f6ef3e216d23527ad3d2 745 Gene3D G3DSA:1.10.10.160 110 184 4.3E-90 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JO40_00865 5d1a80c48837f6ef3e216d23527ad3d2 745 Gene3D G3DSA:1.10.486.10 377 553 2.4E-95 T 14-10-2018 JO40_00865 5d1a80c48837f6ef3e216d23527ad3d2 745 Gene3D G3DSA:3.40.50.300 10 267 4.3E-90 T 14-10-2018 JO40_00865 5d1a80c48837f6ef3e216d23527ad3d2 745 Pfam PF13245 AAA domain 14 252 3.2E-37 T 14-10-2018 JO40_00865 5d1a80c48837f6ef3e216d23527ad3d2 745 SUPERFAMILY SSF52540 4 654 3.55E-151 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00865 5d1a80c48837f6ef3e216d23527ad3d2 745 Gene3D G3DSA:3.40.50.300 276 649 2.4E-95 T 14-10-2018 JO40_00865 5d1a80c48837f6ef3e216d23527ad3d2 745 Pfam PF13361 UvrD-like helicase C-terminal domain 272 628 1.7E-62 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JO40_07885 e74aea2b9fafb6e8442a6286a9a8977d 273 Pfam PF01026 TatD related DNase 3 266 3.4E-38 T 14-10-2018 IPR001130 TatD family GO:0016788 JO40_07885 e74aea2b9fafb6e8442a6286a9a8977d 273 SUPERFAMILY SSF51556 1 268 1.26E-35 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_07885 e74aea2b9fafb6e8442a6286a9a8977d 273 PIRSF PIRSF005902 1 270 1.9E-38 T 14-10-2018 IPR001130 TatD family GO:0016788 JO40_07885 e74aea2b9fafb6e8442a6286a9a8977d 273 Gene3D G3DSA:3.20.20.140 1 270 2.5E-37 T 14-10-2018 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 251 6.2E-98 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 Gene3D G3DSA:3.90.226.10 1 251 1.1E-76 T 14-10-2018 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 Pfam PF01039 Carboxyl transferase domain 34 209 4.3E-16 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 SUPERFAMILY SSF52096 2 249 2.98E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 252 36.033 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 222 231 1.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 188 1.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 211 1.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 100 114 1.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02780 6c130ce5e8780462a427f05dfefaedbe 267 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 134 152 1.0E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02175 01d013b40d4c644abce1ea5006fe79b6 128 Pfam PF08349 Protein of unknown function (DUF1722) 16 124 7.1E-26 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 JO40_02175 01d013b40d4c644abce1ea5006fe79b6 128 PIRSF PIRSF032441 1 128 2.6E-54 T 14-10-2018 IPR016996 Uncharacterised conserved protein UCP032441 JO40_02480 d6bf8a946b558a38401bef8c6553e9d1 690 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 4 686 24.669 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_02480 d6bf8a946b558a38401bef8c6553e9d1 690 Pfam PF03030 Inorganic H+ pyrophosphatase 15 681 1.4E-265 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_02480 d6bf8a946b558a38401bef8c6553e9d1 690 PIRSF PIRSF001265 1 689 5.1E-268 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_02480 d6bf8a946b558a38401bef8c6553e9d1 690 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 13 686 1.2E-262 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_04620 c0abd6881a10f3f985d62eb264d7edc9 380 Gene3D G3DSA:3.40.50.410 217 377 1.4E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_04620 c0abd6881a10f3f985d62eb264d7edc9 380 Pfam PF00092 von Willebrand factor type A domain 230 370 4.4E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_04620 c0abd6881a10f3f985d62eb264d7edc9 380 SUPERFAMILY SSF53300 225 375 2.54E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 SUPERFAMILY SSF46689 238 287 2.46E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 Pfam PF12833 Helix-turn-helix domain 214 286 7.6E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 SUPERFAMILY SSF46689 185 236 7.62E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 1.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 1.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 SMART SM00342 202 285 2.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO40_00975 71785ea3705c5cce0e41cc466076a7d4 294 Gene3D G3DSA:1.10.10.60 184 289 1.2E-23 T 14-10-2018 JO40_10025 36acf0d389024d0d13e96e54b1e3aec6 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 226 4.3E-27 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 SMART SM00487 126 322 4.7E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 SUPERFAMILY SSF52540 145 527 3.69E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 Pfam PF00270 DEAD/DEAH box helicase 133 292 8.1E-12 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 Gene3D G3DSA:3.40.50.300 118 309 4.6E-64 T 14-10-2018 JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 Gene3D G3DSA:1.10.8.630 5 115 2.1E-21 T 14-10-2018 JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 SMART SM00490 420 517 1.4E-9 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 Pfam PF00271 Helicase conserved C-terminal domain 445 516 1.7E-8 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 TIGRFAM TIGR00595 priA: primosomal protein N' 151 663 1.3E-191 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JO40_01570 1a3bea037d3415982ee9fb70569ef354 666 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 665 23.607 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JO40_07640 0a3d9aeedd1386760aadc7071266611f 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 226 2.5E-20 T 14-10-2018 JO40_07640 0a3d9aeedd1386760aadc7071266611f 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 1.4E-44 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_08490 8007de42a00a86e08e70d7d334b17db7 196 PIRSF PIRSF000709 2 157 7.8E-11 T 14-10-2018 JO40_08490 8007de42a00a86e08e70d7d334b17db7 196 SUPERFAMILY SSF53254 2 188 3.88E-39 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO40_08490 8007de42a00a86e08e70d7d334b17db7 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 176 5.2E-33 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO40_08490 8007de42a00a86e08e70d7d334b17db7 196 SMART SM00855 2 150 9.4E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO40_08490 8007de42a00a86e08e70d7d334b17db7 196 Gene3D G3DSA:3.40.50.1240 1 191 2.4E-35 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO40_09505 0e4eb3208ed30c5111104de16c0f32b8 85 Gene3D G3DSA:3.40.1620.10 1 40 3.1E-14 T 14-10-2018 JO40_09505 0e4eb3208ed30c5111104de16c0f32b8 85 SUPERFAMILY SSF143120 1 81 8.11E-24 T 14-10-2018 IPR036165 YefM-like superfamily JO40_09505 0e4eb3208ed30c5111104de16c0f32b8 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 55 3.9E-12 T 14-10-2018 JO40_09505 0e4eb3208ed30c5111104de16c0f32b8 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 1.5E-21 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO40_09505 0e4eb3208ed30c5111104de16c0f32b8 85 Gene3D G3DSA:1.10.1220.170 41 85 8.7E-10 T 14-10-2018 JO40_06310 b76054da3a25e62ea33debedc675189c 415 Pfam PF00027 Cyclic nucleotide-binding domain 197 283 3.4E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06310 b76054da3a25e62ea33debedc675189c 415 Pfam PF00027 Cyclic nucleotide-binding domain 8 95 2.1E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06310 b76054da3a25e62ea33debedc675189c 415 SMART SM00100 1 107 0.82 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06310 b76054da3a25e62ea33debedc675189c 415 SMART SM00100 179 296 1.1E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06310 b76054da3a25e62ea33debedc675189c 415 SUPERFAMILY SSF51206 196 306 5.24E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_06310 b76054da3a25e62ea33debedc675189c 415 Gene3D G3DSA:2.60.120.10 1 123 3.5E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_06310 b76054da3a25e62ea33debedc675189c 415 SUPERFAMILY SSF51206 4 120 4.71E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_06310 b76054da3a25e62ea33debedc675189c 415 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 245 262 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JO40_06310 b76054da3a25e62ea33debedc675189c 415 SUPERFAMILY SSF46785 315 390 1.09E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_06310 b76054da3a25e62ea33debedc675189c 415 Gene3D G3DSA:2.60.120.10 188 310 3.5E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_06310 b76054da3a25e62ea33debedc675189c 415 Gene3D G3DSA:1.10.10.10 315 407 1.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_00375 14f646532006cb3798abfb87e9a9cea0 52 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 JO40_00375 14f646532006cb3798abfb87e9a9cea0 52 Gene3D G3DSA:2.20.28.10 1 52 5.6E-29 T 14-10-2018 JO40_00375 14f646532006cb3798abfb87e9a9cea0 52 Pfam PF00301 Rubredoxin 3 49 2.8E-26 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 JO40_00375 14f646532006cb3798abfb87e9a9cea0 52 SUPERFAMILY SSF57802 1 51 1.11E-23 T 14-10-2018 JO40_00375 14f646532006cb3798abfb87e9a9cea0 52 PRINTS PR00163 Rubredoxin signature 33 49 4.2E-13 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 JO40_00375 14f646532006cb3798abfb87e9a9cea0 52 PRINTS PR00163 Rubredoxin signature 3 19 4.2E-13 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 JO40_00375 14f646532006cb3798abfb87e9a9cea0 52 PIRSF PIRSF000071 1 52 5.9E-29 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 JO40_11335 74cd7558c15a3722baaea49643654e23 168 Pfam PF01584 CheW-like domain 21 158 7.7E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO40_11335 74cd7558c15a3722baaea49643654e23 168 Gene3D G3DSA:2.40.50.180 39 152 6.1E-37 T 14-10-2018 JO40_11335 74cd7558c15a3722baaea49643654e23 168 Gene3D G3DSA:2.30.30.40 22 151 6.1E-37 T 14-10-2018 JO40_11335 74cd7558c15a3722baaea49643654e23 168 SUPERFAMILY SSF50341 16 160 3.79E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JO40_11335 74cd7558c15a3722baaea49643654e23 168 SMART SM00260 16 157 8.6E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO40_08140 b1a2e258f695992544a7311045faa29b 193 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 8 189 4.4E-53 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_08140 b1a2e258f695992544a7311045faa29b 193 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 6 189 4.6E-34 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_02660 7bcbf83f7bfbb49cebac086a8fabdd34 460 Pfam PF01554 MatE 274 417 7.2E-17 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_02660 7bcbf83f7bfbb49cebac086a8fabdd34 460 Pfam PF01554 MatE 30 190 4.1E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_02660 7bcbf83f7bfbb49cebac086a8fabdd34 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 427 6.6E-70 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_02660 7bcbf83f7bfbb49cebac086a8fabdd34 460 PIRSF PIRSF006603 10 460 1.3E-83 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_00065 5d4f3de352faed41040905f254e1471c 227 Gene3D G3DSA:3.40.1180.10 2 227 2.6E-89 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JO40_00065 5d4f3de352faed41040905f254e1471c 227 SUPERFAMILY SSF64005 6 220 8.37E-80 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JO40_00065 5d4f3de352faed41040905f254e1471c 227 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 171 188 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 JO40_00065 5d4f3de352faed41040905f254e1471c 227 Pfam PF01255 Putative undecaprenyl diphosphate synthase 11 225 5.8E-77 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JO40_00065 5d4f3de352faed41040905f254e1471c 227 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 4 226 38.216 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JO40_00065 5d4f3de352faed41040905f254e1471c 227 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 6 225 1.8E-79 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JO40_03150 37f837db3db6f8105e055389ac826dd6 110 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 105 9.1E-29 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 JO40_03150 37f837db3db6f8105e055389ac826dd6 110 Pfam PF13657 HipA N-terminal domain 8 105 2.0E-25 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 Pfam PF01820 D-ala D-ala ligase N-terminus 2 125 1.9E-28 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 352 3.5E-103 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 PIRSF PIRSF039102 1 361 3.9E-132 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 Pfam PF07478 D-ala D-ala ligase C-terminus 144 350 1.6E-72 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 SUPERFAMILY SSF52440 1 135 6.71E-31 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 SUPERFAMILY SSF56059 136 356 2.47E-57 T 14-10-2018 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 Gene3D G3DSA:3.30.470.20 126 355 3.0E-76 T 14-10-2018 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 Gene3D G3DSA:3.30.1490.20 151 225 3.0E-76 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 353 39.454 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 Gene3D G3DSA:3.40.50.20 1 125 1.6E-33 T 14-10-2018 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 294 323 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_13180 02c0ced65f7d585ee90e35a9fdeeba24 368 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 103 114 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_13330 178cd5e78e54f4a92ca93a6120b366a0 178 SUPERFAMILY SSF56235 5 178 4.36E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JO40_13330 178cd5e78e54f4a92ca93a6120b366a0 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 8 178 8.1E-85 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JO40_13330 178cd5e78e54f4a92ca93a6120b366a0 178 Gene3D G3DSA:3.60.20.10 3 178 7.9E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JO40_13330 178cd5e78e54f4a92ca93a6120b366a0 178 Pfam PF00227 Proteasome subunit 7 176 3.1E-22 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 JO40_13330 178cd5e78e54f4a92ca93a6120b366a0 178 PIRSF PIRSF039093 1 178 8.4E-90 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JO40_13330 178cd5e78e54f4a92ca93a6120b366a0 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 7 178 41.403 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JO40_06400 185004dec408eb1606ef6d5fd5de6a81 407 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 57 1.4E-10 T 14-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola JO40_06995 f106e5322b39b1d31245bda8c7028040 575 Pfam PF00501 AMP-binding enzyme 31 466 1.7E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO40_06995 f106e5322b39b1d31245bda8c7028040 575 Gene3D G3DSA:3.40.50.12780 303 462 1.5E-40 T 14-10-2018 JO40_06995 f106e5322b39b1d31245bda8c7028040 575 SUPERFAMILY SSF56801 11 573 1.57E-109 T 14-10-2018 JO40_06995 f106e5322b39b1d31245bda8c7028040 575 Gene3D G3DSA:3.40.50.12780 17 299 1.3E-53 T 14-10-2018 JO40_06995 f106e5322b39b1d31245bda8c7028040 575 Gene3D G3DSA:3.30.300.30 463 575 3.3E-6 T 14-10-2018 JO40_06995 f106e5322b39b1d31245bda8c7028040 575 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 14-10-2018 IPR020845 AMP-binding, conserved site JO40_06830 3cbb3b9318251d93dd36a1c568026ad1 700 Gene3D G3DSA:3.40.50.300 3 249 2.7E-57 T 14-10-2018 JO40_06830 3cbb3b9318251d93dd36a1c568026ad1 700 SMART SM00382 32 211 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06830 3cbb3b9318251d93dd36a1c568026ad1 700 Pfam PF00005 ABC transporter 23 163 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06830 3cbb3b9318251d93dd36a1c568026ad1 700 SUPERFAMILY SSF52540 4 213 1.0E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06830 3cbb3b9318251d93dd36a1c568026ad1 700 Pfam PF02687 FtsX-like permease family 598 687 1.3E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_05945 9989e8035fcd8be53adf850fc123214c 339 Gene3D G3DSA:3.40.50.720 128 297 6.2E-119 T 14-10-2018 JO40_05945 9989e8035fcd8be53adf850fc123214c 339 PIRSF PIRSF001439 23 324 2.1E-47 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 JO40_05945 9989e8035fcd8be53adf850fc123214c 339 Gene3D G3DSA:3.30.1780.10 19 335 6.2E-119 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 JO40_05945 9989e8035fcd8be53adf850fc123214c 339 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 14 316 2.0E-91 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 JO40_05945 9989e8035fcd8be53adf850fc123214c 339 SUPERFAMILY SSF51735 3 338 2.78E-89 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Gene3D G3DSA:1.10.268.10 374 462 1.0E-204 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Gene3D G3DSA:3.90.199.10 36 491 1.0E-204 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 SUPERFAMILY SSF101904 504 813 4.71E-98 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 810 0.0 T 14-10-2018 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Gene3D G3DSA:3.30.1360.40 240 337 1.0E-204 T 14-10-2018 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 1.9E-155 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 SMART SM00434 15 469 1.2E-278 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 616 659 5.6E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 715 760 6.7E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 810 2.7E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 608 3.3E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 709 3.1E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 510 553 3.4E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 SUPERFAMILY SSF56719 34 492 1.83E-168 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 812 23.903 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JO40_04745 a59f0a028b4e4a6fefa87687ea13209e 815 Gene3D G3DSA:2.120.10.90 501 809 6.3E-112 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JO40_10760 be89829eec734290255e33822dde6233 178 Pfam PF00156 Phosphoribosyl transferase domain 45 151 1.0E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO40_10760 be89829eec734290255e33822dde6233 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 173 7.3E-60 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 JO40_10760 be89829eec734290255e33822dde6233 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 173 35.75 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 JO40_10760 be89829eec734290255e33822dde6233 178 Gene3D G3DSA:3.40.50.2020 2 176 3.1E-59 T 14-10-2018 JO40_10760 be89829eec734290255e33822dde6233 178 SUPERFAMILY SSF53271 10 175 4.46E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_02270 700e9e670e012de9519067a7bb692582 139 Pfam PF00252 Ribosomal protein L16p/L10e 5 132 4.4E-48 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 JO40_02270 700e9e670e012de9519067a7bb692582 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02270 700e9e670e012de9519067a7bb692582 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 4 127 2.6E-58 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02270 700e9e670e012de9519067a7bb692582 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 37.194 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02270 700e9e670e012de9519067a7bb692582 139 Gene3D G3DSA:3.90.1170.10 1 139 1.2E-52 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02270 700e9e670e012de9519067a7bb692582 139 SUPERFAMILY SSF54686 6 134 4.71E-52 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02270 700e9e670e012de9519067a7bb692582 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 60 71 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02270 700e9e670e012de9519067a7bb692582 139 PRINTS PR00060 Ribosomal protein L16 signature 89 118 2.2E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02270 700e9e670e012de9519067a7bb692582 139 PRINTS PR00060 Ribosomal protein L16 signature 59 88 2.2E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02270 700e9e670e012de9519067a7bb692582 139 PRINTS PR00060 Ribosomal protein L16 signature 25 37 2.2E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02270 700e9e670e012de9519067a7bb692582 139 PRINTS PR00060 Ribosomal protein L16 signature 43 54 2.2E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_07490 7ad3a4a11545da7ba805976c47fbd4c4 692 Pfam PF01464 Transglycosylase SLT domain 536 642 2.8E-27 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JO40_07490 7ad3a4a11545da7ba805976c47fbd4c4 692 Gene3D G3DSA:1.10.530.10 525 680 1.3E-41 T 14-10-2018 JO40_07490 7ad3a4a11545da7ba805976c47fbd4c4 692 SUPERFAMILY SSF53955 530 675 1.37E-39 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO40_07455 097deac21c81764a58527b5e5df57be3 194 Pfam PF01613 Flavin reductase like domain 12 146 3.3E-11 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JO40_07455 097deac21c81764a58527b5e5df57be3 194 SUPERFAMILY SSF50475 9 177 1.0E-30 T 14-10-2018 JO40_07455 097deac21c81764a58527b5e5df57be3 194 SMART SM00903 9 152 0.0092 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JO40_07455 097deac21c81764a58527b5e5df57be3 194 Gene3D G3DSA:2.30.110.10 2 194 1.4E-46 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO40_04380 96631d4a5aadab3afc918aea0d8eec55 436 Gene3D G3DSA:3.40.190.10 52 389 4.6E-27 T 14-10-2018 JO40_04380 96631d4a5aadab3afc918aea0d8eec55 436 Gene3D G3DSA:3.40.190.10 152 405 4.6E-27 T 14-10-2018 JO40_04380 96631d4a5aadab3afc918aea0d8eec55 436 SUPERFAMILY SSF53850 27 428 3.88E-28 T 14-10-2018 JO40_04380 96631d4a5aadab3afc918aea0d8eec55 436 Pfam PF01547 Bacterial extracellular solute-binding protein 49 340 8.0E-5 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO40_01060 ad833e9b76ee938dc86a7dc975ce9d70 259 Gene3D G3DSA:3.40.50.300 1 254 6.4E-69 T 14-10-2018 JO40_01060 ad833e9b76ee938dc86a7dc975ce9d70 259 Pfam PF00005 ABC transporter 21 171 7.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_01060 ad833e9b76ee938dc86a7dc975ce9d70 259 SUPERFAMILY SSF52540 4 234 1.01E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01060 ad833e9b76ee938dc86a7dc975ce9d70 259 SMART SM00382 30 220 3.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09850 29c96010327f3c5171401aae0ad840fe 341 Pfam PF00535 Glycosyl transferase family 2 6 133 1.1E-32 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO40_09850 29c96010327f3c5171401aae0ad840fe 341 Gene3D G3DSA:3.90.550.10 1 257 1.4E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09850 29c96010327f3c5171401aae0ad840fe 341 SUPERFAMILY SSF53448 4 212 5.19E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Pfam PF00515 Tetratricopeptide repeat 75 106 4.9E-9 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Pfam PF00515 Tetratricopeptide repeat 277 310 1.2E-10 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SMART SM00028 142 175 0.094 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SMART SM00028 40 73 0.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SMART SM00028 74 107 5.3E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SMART SM00028 277 310 2.7E-9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SMART SM00028 243 276 1.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SMART SM00028 108 141 54.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SMART SM00028 176 209 0.0011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 SUPERFAMILY SSF48452 45 318 2.09E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Pfam PF13181 Tetratricopeptide repeat 144 175 0.13 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Pfam PF13181 Tetratricopeptide repeat 40 73 0.061 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Pfam PF13181 Tetratricopeptide repeat 109 137 7.8E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Gene3D G3DSA:1.25.40.10 214 336 4.2E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Gene3D G3DSA:1.25.40.10 22 126 5.4E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06445 01fade3cbb8c341fe9d4fd8fe6eed19e 336 Gene3D G3DSA:1.25.40.10 127 205 2.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10790 7415845c95a70d44c84121c07db66b70 93 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 3.9E-17 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10790 7415845c95a70d44c84121c07db66b70 93 ProSitePatterns PS01048 Ribosomal protein S6 signature. 42 51 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO40_10790 7415845c95a70d44c84121c07db66b70 93 SUPERFAMILY SSF54995 1 93 1.57E-20 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10790 7415845c95a70d44c84121c07db66b70 93 Gene3D G3DSA:3.30.70.60 1 93 1.1E-20 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JO40_10790 7415845c95a70d44c84121c07db66b70 93 Pfam PF01250 Ribosomal protein S6 3 90 4.0E-16 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10790 7415845c95a70d44c84121c07db66b70 93 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 93 15.731 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO40_03375 6d537dc67e19f17d380e88aced348d29 292 SUPERFAMILY SSF47384 72 142 1.71E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JO40_03375 6d537dc67e19f17d380e88aced348d29 292 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 190 289 1.4E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_03375 6d537dc67e19f17d380e88aced348d29 292 SMART SM00388 74 141 1.7E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO40_03375 6d537dc67e19f17d380e88aced348d29 292 Gene3D G3DSA:1.10.287.130 20 138 2.0E-11 T 14-10-2018 JO40_03375 6d537dc67e19f17d380e88aced348d29 292 SUPERFAMILY SSF55874 132 289 5.5E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_03375 6d537dc67e19f17d380e88aced348d29 292 Pfam PF00512 His Kinase A (phospho-acceptor) domain 79 141 1.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO40_03375 6d537dc67e19f17d380e88aced348d29 292 Gene3D G3DSA:3.30.565.10 139 290 3.1E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_03375 6d537dc67e19f17d380e88aced348d29 292 SMART SM00387 185 292 1.6E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_08795 9cd0501c7ee0802e69f0b7257600d617 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 123 24.191 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO40_08795 9cd0501c7ee0802e69f0b7257600d617 125 SUPERFAMILY SSF56214 1 122 5.1E-30 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO40_08795 9cd0501c7ee0802e69f0b7257600d617 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 123 2.1E-28 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO40_08795 9cd0501c7ee0802e69f0b7257600d617 125 Gene3D G3DSA:3.90.470.20 1 123 4.3E-36 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO40_08795 9cd0501c7ee0802e69f0b7257600d617 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 122 1.0E-49 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO40_08795 9cd0501c7ee0802e69f0b7257600d617 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 122 3.7E-30 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO40_08795 9cd0501c7ee0802e69f0b7257600d617 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 96 1.2E-19 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO40_06505 adf0e43ae1b3edfb0cd629fe587605a0 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 7.7E-142 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO40_06505 adf0e43ae1b3edfb0cd629fe587605a0 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 10 370 7.2E-149 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO40_06505 adf0e43ae1b3edfb0cd629fe587605a0 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 367 50.062 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO40_06505 adf0e43ae1b3edfb0cd629fe587605a0 373 Gene3D G3DSA:3.20.20.105 1 372 7.7E-149 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO40_06505 adf0e43ae1b3edfb0cd629fe587605a0 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 364 7.2E-75 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO40_06505 adf0e43ae1b3edfb0cd629fe587605a0 373 SUPERFAMILY SSF51713 2 368 1.31E-138 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO40_04410 dbf1cc7225d390abe6a7b6f2b65cb555 233 SUPERFAMILY SSF52540 4 218 3.15E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04410 dbf1cc7225d390abe6a7b6f2b65cb555 233 Pfam PF00005 ABC transporter 22 156 1.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04410 dbf1cc7225d390abe6a7b6f2b65cb555 233 SMART SM00382 30 205 3.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04410 dbf1cc7225d390abe6a7b6f2b65cb555 233 Gene3D G3DSA:3.40.50.300 2 230 3.3E-44 T 14-10-2018 JO40_10600 eda65e648ead2c8406b21bc3a5694e2a 117 SUPERFAMILY SSF50891 5 113 7.21E-5 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JO40_10600 eda65e648ead2c8406b21bc3a5694e2a 117 Gene3D G3DSA:2.40.100.20 4 114 1.2E-5 T 14-10-2018 JO40_11760 e5519c45746eeff1933b6dbd02350e39 220 Gene3D G3DSA:3.30.1330.90 10 85 3.1E-20 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JO40_11760 e5519c45746eeff1933b6dbd02350e39 220 Pfam PF03315 Serine dehydratase beta chain 3 75 6.6E-14 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO40_11760 e5519c45746eeff1933b6dbd02350e39 220 PIRSF PIRSF036692 1 219 1.0E-77 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO40_11760 e5519c45746eeff1933b6dbd02350e39 220 SUPERFAMILY SSF55021 145 218 2.08E-10 T 14-10-2018 JO40_11760 e5519c45746eeff1933b6dbd02350e39 220 Gene3D G3DSA:3.30.70.260 145 218 1.4E-10 T 14-10-2018 JO40_11760 e5519c45746eeff1933b6dbd02350e39 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 2 194 1.0E-61 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO40_11760 e5519c45746eeff1933b6dbd02350e39 220 SUPERFAMILY SSF143548 16 135 1.02E-32 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JO40_04805 ddf79922f9ce5ee5bf7daf9fee21b069 574 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 148 545 4.7E-110 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JO40_04805 ddf79922f9ce5ee5bf7daf9fee21b069 574 Pfam PF02386 Cation transport protein 127 562 2.1E-81 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 JO40_00270 29547d50800647112226773337e9a9ec 592 Gene3D G3DSA:3.10.105.10 289 560 2.3E-24 T 14-10-2018 JO40_00270 29547d50800647112226773337e9a9ec 592 Gene3D G3DSA:3.40.190.10 20 287 4.2E-43 T 14-10-2018 JO40_00270 29547d50800647112226773337e9a9ec 592 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 479 3.7E-54 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_00270 29547d50800647112226773337e9a9ec 592 PIRSF PIRSF002741 1 581 2.7E-54 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO40_00270 29547d50800647112226773337e9a9ec 592 SUPERFAMILY SSF53850 44 581 5.25E-67 T 14-10-2018 JO40_01565 c68dc91dc97bf7c91ca4679e32a3c41e 271 SMART SM00987 110 257 2.6E-37 T 14-10-2018 JO40_01565 c68dc91dc97bf7c91ca4679e32a3c41e 271 SMART SM00986 110 257 2.6E-37 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO40_01565 c68dc91dc97bf7c91ca4679e32a3c41e 271 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 89 265 4.9E-62 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 JO40_01565 c68dc91dc97bf7c91ca4679e32a3c41e 271 Gene3D G3DSA:3.40.470.10 78 270 1.9E-70 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO40_01565 c68dc91dc97bf7c91ca4679e32a3c41e 271 Pfam PF03167 Uracil DNA glycosylase superfamily 115 257 7.2E-45 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO40_01565 c68dc91dc97bf7c91ca4679e32a3c41e 271 SUPERFAMILY SSF52141 77 265 1.08E-58 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 20 364 29.223 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 SUPERFAMILY SSF55681 98 298 1.66E-43 T 14-10-2018 JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 101 362 1.0E-38 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 Pfam PF08279 HTH domain 21 72 8.4E-10 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 Gene3D G3DSA:3.30.930.10 85 313 2.0E-48 T 14-10-2018 JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 SUPERFAMILY SSF46785 23 73 1.73E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 Gene3D G3DSA:1.10.10.10 11 75 2.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 Pfam PF03099 Biotin/lipoate A/B protein ligase family 104 240 2.0E-13 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JO40_05230 2f785dff72ad80b061a3f2decbff3505 367 Gene3D G3DSA:2.30.30.100 318 364 9.8E-8 T 14-10-2018 JO40_12815 8fd0debeeb8bee1fc19767f2dbd4f5c6 166 PIRSF PIRSF015034 1 165 6.1E-30 T 14-10-2018 IPR025542 YacH protein JO40_12815 8fd0debeeb8bee1fc19767f2dbd4f5c6 166 Pfam PF02151 UvrB/uvrC motif 130 161 1.1E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO40_12815 8fd0debeeb8bee1fc19767f2dbd4f5c6 166 SUPERFAMILY SSF46600 126 160 3.14E-6 T 14-10-2018 IPR036876 UVR domain superfamily JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 SUPERFAMILY SSF52540 334 589 7.77E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 Gene3D G3DSA:3.40.50.300 337 600 3.3E-80 T 14-10-2018 JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 Pfam PF00664 ABC transporter transmembrane region 64 298 5.7E-24 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 Pfam PF00005 ABC transporter 372 520 5.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 Gene3D G3DSA:1.20.1560.10 1 330 2.6E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 SUPERFAMILY SSF90123 10 331 3.92E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05620 97a4e7835d2fd205825fd01439d1b32e 611 SMART SM00382 380 566 4.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_13335 edd82bc2dd852257f4b05e061a2987e9 305 SUPERFAMILY SSF56349 2 295 1.47E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO40_13335 edd82bc2dd852257f4b05e061a2987e9 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 85 8.8E-17 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JO40_13335 edd82bc2dd852257f4b05e061a2987e9 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 305 50.343 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD JO40_13335 edd82bc2dd852257f4b05e061a2987e9 305 Gene3D G3DSA:1.10.443.10 111 299 9.3E-49 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO40_13335 edd82bc2dd852257f4b05e061a2987e9 305 Pfam PF00589 Phage integrase family 129 290 1.0E-38 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO40_13335 edd82bc2dd852257f4b05e061a2987e9 305 Gene3D G3DSA:1.10.150.130 1 106 4.3E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JO40_04870 5d75b1f01c56048ebe77c38a9511afb2 290 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 3 271 2.3E-97 T 14-10-2018 IPR019855 CRISPR-associated protein Cas1, NMENI subtype GO:0004520|GO:0043571|GO:0046872 JO40_04870 5d75b1f01c56048ebe77c38a9511afb2 290 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 264 9.7E-27 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 JO40_04870 5d75b1f01c56048ebe77c38a9511afb2 290 Gene3D G3DSA:1.20.120.920 88 283 1.4E-33 T 14-10-2018 JO40_04870 5d75b1f01c56048ebe77c38a9511afb2 290 Pfam PF01867 CRISPR associated protein Cas1 6 234 2.3E-22 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 JO40_04870 5d75b1f01c56048ebe77c38a9511afb2 290 Gene3D G3DSA:3.100.10.20 5 78 5.0E-7 T 14-10-2018 JO40_04870 5d75b1f01c56048ebe77c38a9511afb2 290 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 287 16.949 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 JO40_01170 26e95c0c09064d0fdbe06892d5ee942b 394 SUPERFAMILY SSF64182 36 354 3.27E-26 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO40_01170 26e95c0c09064d0fdbe06892d5ee942b 394 Pfam PF01368 DHH family 36 175 3.0E-7 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO40_01170 26e95c0c09064d0fdbe06892d5ee942b 394 Gene3D G3DSA:3.90.1640.10 16 220 8.6E-25 T 14-10-2018 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Gene3D G3DSA:3.30.70.270 8 166 3.3E-60 T 14-10-2018 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Gene3D G3DSA:3.30.1490.100 241 353 6.9E-22 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 SUPERFAMILY SSF100879 245 343 3.92E-21 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Pfam PF00817 impB/mucB/samB family 10 155 1.8E-50 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Gene3D G3DSA:2.30.40.20 24 75 3.3E-60 T 14-10-2018 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 350 4.5E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Hamap MF_01113 DNA polymerase IV [dinB]. 4 353 31.979 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Gene3D G3DSA:1.10.150.20 169 233 6.8E-13 T 14-10-2018 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 Pfam PF11798 IMS family HHH motif 170 198 1.5E-7 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 JO40_07900 1c698a09d8a278e5a5fb85ecd79a1ac1 394 SUPERFAMILY SSF56672 4 231 1.6E-79 T 14-10-2018 JO40_01070 c373ccae1e1e9d4c2464b252fee96f74 311 Gene3D G3DSA:3.40.50.1980 51 173 3.5E-23 T 14-10-2018 JO40_01070 c373ccae1e1e9d4c2464b252fee96f74 311 Pfam PF01497 Periplasmic binding protein 54 284 2.9E-34 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JO40_01070 c373ccae1e1e9d4c2464b252fee96f74 311 Gene3D G3DSA:3.40.50.1980 174 308 3.0E-37 T 14-10-2018 JO40_01070 c373ccae1e1e9d4c2464b252fee96f74 311 SUPERFAMILY SSF53807 39 311 1.84E-52 T 14-10-2018 JO40_08185 644e5a47d8abc669bb73af081dfeef29 90 Gene3D G3DSA:3.30.470.30 2 90 1.8E-43 T 14-10-2018 JO40_08185 644e5a47d8abc669bb73af081dfeef29 90 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 31 90 5.1E-33 T 14-10-2018 IPR032390 Polynucleotide kinase-phosphatase, C-terminal JO40_08185 644e5a47d8abc669bb73af081dfeef29 90 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 3 27 1.5E-10 T 14-10-2018 IPR032380 Polynucleotide kinase-phosphatase, ligase domain JO40_01550 fabd7bddfae472925472739a545f2da3 262 SUPERFAMILY SSF52058 111 187 4.93E-11 T 14-10-2018 JO40_01550 fabd7bddfae472925472739a545f2da3 262 Gene3D G3DSA:3.80.10.10 105 240 2.8E-20 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_10915 8754f58abf5cc21f778eb03bd9abb508 539 Pfam PF09820 Predicted AAA-ATPase 8 291 2.8E-97 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_10915 8754f58abf5cc21f778eb03bd9abb508 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 438 523 3.7E-21 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_10915 8754f58abf5cc21f778eb03bd9abb508 539 SUPERFAMILY SSF52540 33 204 7.96E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09040 402af2530c3d25656d23fa084772dc3c 169 SUPERFAMILY SSF160443 86 169 1.18E-16 T 14-10-2018 IPR036063 Smr domain superfamily JO40_09040 402af2530c3d25656d23fa084772dc3c 169 SMART SM00463 86 169 4.2E-19 T 14-10-2018 IPR002625 Smr domain JO40_09040 402af2530c3d25656d23fa084772dc3c 169 Pfam PF01713 Smr domain 89 169 2.0E-19 T 14-10-2018 IPR002625 Smr domain JO40_09040 402af2530c3d25656d23fa084772dc3c 169 Gene3D G3DSA:3.30.1370.110 78 169 8.0E-22 T 14-10-2018 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 235 247 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 187 202 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 Pfam PF00813 FliP family 61 254 7.0E-73 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 232 257 2.6E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 77 97 2.6E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 58 77 2.6E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 208 229 2.6E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 187 207 2.6E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 97 116 2.6E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 128 142 7.1E-21 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 116 128 7.1E-21 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 248 258 7.1E-21 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 7.1E-21 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 180 192 7.1E-21 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 56 65 7.1E-21 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO40_05900 23f4b04e9b93c79e3dd4fc72ef3ebedb 259 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 60 258 3.2E-85 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO40_11770 6ada5b8094bb346ddfb137ca1168a567 147 Gene3D G3DSA:2.40.50.140 92 145 3.1E-12 T 14-10-2018 JO40_11770 6ada5b8094bb346ddfb137ca1168a567 147 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 145 6.7E-18 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain JO40_11770 6ada5b8094bb346ddfb137ca1168a567 147 SUPERFAMILY SSF141322 101 145 1.11E-5 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 Pfam PF13654 AAA domain 33 554 9.8E-132 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 Gene3D G3DSA:3.40.50.300 8 204 9.8E-21 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 Gene3D G3DSA:3.40.50.300 268 467 1.7E-42 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 665 768 9.9E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 Gene3D G3DSA:3.30.230.10 556 794 5.9E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 2.4E-11 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 662 681 2.4E-11 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 722 740 2.4E-11 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 692 711 2.4E-11 T 14-10-2018 JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 SUPERFAMILY SSF52540 28 551 1.45E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00665 3bb83ccd6cc712d9cc689df5e09e0a3a 801 SUPERFAMILY SSF54211 583 772 7.59E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_03790 d90dbdbcc57d1449e69be59a613d916b 189 Gene3D G3DSA:1.10.357.10 2 187 4.1E-22 T 14-10-2018 JO40_03790 d90dbdbcc57d1449e69be59a613d916b 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_03790 d90dbdbcc57d1449e69be59a613d916b 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_03790 d90dbdbcc57d1449e69be59a613d916b 189 SUPERFAMILY SSF46689 2 72 1.4E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_03790 d90dbdbcc57d1449e69be59a613d916b 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 SUPERFAMILY SSF58104 436 657 6.93E-43 T 14-10-2018 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 SMART SM00283 422 669 4.2E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 SUPERFAMILY SSF158472 328 374 8.37E-6 T 14-10-2018 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 SMART SM00304 327 379 1.2E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 637 2.3E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 Gene3D G3DSA:1.20.1480.50 290 384 2.5E-8 T 14-10-2018 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 SUPERFAMILY SSF103190 81 200 1.49E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 Pfam PF14827 Double sensory domain of two-component sensor kinase 69 212 1.2E-24 T 14-10-2018 IPR029150 Double Cache domain 3 JO40_06280 ffa907924f8b480eb5479d5e04f4ae50 712 Gene3D G3DSA:1.10.287.950 414 711 3.9E-47 T 14-10-2018 JO40_06095 309961abd24fc32250254b89207d9cd0 770 SUPERFAMILY SSF103473 30 444 1.26E-26 T 14-10-2018 IPR036259 MFS transporter superfamily JO40_06095 309961abd24fc32250254b89207d9cd0 770 Pfam PF07690 Major Facilitator Superfamily 24 372 8.7E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JO40_06095 309961abd24fc32250254b89207d9cd0 770 SUPERFAMILY SSF48371 461 640 1.78E-10 T 14-10-2018 IPR016024 Armadillo-type fold JO40_06095 309961abd24fc32250254b89207d9cd0 770 Gene3D G3DSA:1.20.1250.20 17 445 3.4E-14 T 14-10-2018 JO40_06095 309961abd24fc32250254b89207d9cd0 770 Gene3D G3DSA:1.25.10.10 481 661 5.0E-11 T 14-10-2018 IPR011989 Armadillo-like helical JO40_06240 dceea6212d14fdc55143d3f661180f88 260 PIRSF PIRSF038992 1 260 3.3E-76 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO40_06240 dceea6212d14fdc55143d3f661180f88 260 Gene3D G3DSA:3.20.20.70 1 260 3.2E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_06240 dceea6212d14fdc55143d3f661180f88 260 SUPERFAMILY SSF51569 1 248 2.93E-55 T 14-10-2018 JO40_06240 dceea6212d14fdc55143d3f661180f88 260 Pfam PF01791 DeoC/LacD family aldolase 23 231 4.7E-24 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO40_06240 dceea6212d14fdc55143d3f661180f88 260 SMART SM01133 15 232 3.3E-18 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 Hamap MF_00543 Tyrosine phenol-lyase [tpl]. 4 459 80.372 T 14-10-2018 IPR013441 Tyrosine phenol-lyase GO:0006570|GO:0050371 KEGG: 00350+4.1.99.2 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 Gene3D G3DSA:3.40.640.10 61 313 2.1E-216 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 PIRSF PIRSF001386 2 459 2.4E-216 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 Gene3D G3DSA:3.90.1150.10 9 454 2.1E-216 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 TIGRFAM TIGR02618 tyr_phenol_ly: tyrosine phenol-lyase 8 457 7.4E-271 T 14-10-2018 IPR013441 Tyrosine phenol-lyase GO:0006570|GO:0050371 KEGG: 00350+4.1.99.2 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 Pfam PF01212 Beta-eliminating lyase 49 425 7.6E-99 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 250 268 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 JO40_08670 edd913b4f6acf824109b4347f0bf640b 459 SUPERFAMILY SSF53383 5 459 9.98E-140 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_04060 d189f03e0affacfecf0fa97d4bece66c 334 Pfam PF00294 pfkB family carbohydrate kinase 2 305 2.9E-32 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JO40_04060 d189f03e0affacfecf0fa97d4bece66c 334 SUPERFAMILY SSF53613 1 321 3.27E-81 T 14-10-2018 IPR029056 Ribokinase-like JO40_04060 d189f03e0affacfecf0fa97d4bece66c 334 Gene3D G3DSA:3.40.1190.20 1 334 5.0E-133 T 14-10-2018 IPR029056 Ribokinase-like JO40_01030 d4cba0364a3453488db2a3c5df79adcf 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 3.7E-30 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 JO40_01030 d4cba0364a3453488db2a3c5df79adcf 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 2.6E-36 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 JO40_01030 d4cba0364a3453488db2a3c5df79adcf 86 SUPERFAMILY SSF143011 1 83 2.88E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_01030 d4cba0364a3453488db2a3c5df79adcf 86 Gene3D G3DSA:3.30.2310.20 1 84 3.9E-37 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_08210 8bd637b246f73e58c2db0ae3d1474386 602 SUPERFAMILY SSF52540 357 595 7.06E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08210 8bd637b246f73e58c2db0ae3d1474386 602 SMART SM00382 383 579 7.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08210 8bd637b246f73e58c2db0ae3d1474386 602 Gene3D G3DSA:3.40.50.300 347 598 1.2E-66 T 14-10-2018 JO40_08210 8bd637b246f73e58c2db0ae3d1474386 602 SUPERFAMILY SSF90123 10 322 1.83E-6 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08210 8bd637b246f73e58c2db0ae3d1474386 602 Pfam PF00005 ABC transporter 374 524 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_11750 b71d9a0fea29e4cc95435c6ceb8dcb87 223 Gene3D G3DSA:3.40.50.300 1 223 1.8E-58 T 14-10-2018 JO40_11750 b71d9a0fea29e4cc95435c6ceb8dcb87 223 SMART SM00382 31 214 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11750 b71d9a0fea29e4cc95435c6ceb8dcb87 223 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_11750 b71d9a0fea29e4cc95435c6ceb8dcb87 223 Pfam PF00005 ABC transporter 22 170 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_11750 b71d9a0fea29e4cc95435c6ceb8dcb87 223 SUPERFAMILY SSF52540 2 220 8.35E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08270 27034ca0cd7bc75a8fc81497de2226ff 561 SUPERFAMILY SSF51306 158 281 6.8E-20 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO40_08270 27034ca0cd7bc75a8fc81497de2226ff 561 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 490 509 2.5E-14 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_08270 27034ca0cd7bc75a8fc81497de2226ff 561 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 159 175 2.5E-14 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_08270 27034ca0cd7bc75a8fc81497de2226ff 561 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 257 269 2.5E-14 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_08270 27034ca0cd7bc75a8fc81497de2226ff 561 SUPERFAMILY SSF51306 464 559 3.4E-8 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO40_08270 27034ca0cd7bc75a8fc81497de2226ff 561 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 144 280 4.0E-13 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_08270 27034ca0cd7bc75a8fc81497de2226ff 561 Gene3D G3DSA:2.10.109.10 427 531 9.0E-6 T 14-10-2018 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 Pfam PF14579 Helix-hairpin-helix motif 803 892 1.1E-23 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 Gene3D G3DSA:1.10.10.1600 432 513 1.5E-19 T 14-10-2018 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 Pfam PF02811 PHP domain 7 180 4.3E-57 T 14-10-2018 IPR004013 PHP domain GO:0003824 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 SMART SM00481 6 73 2.4E-34 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 300 730 7.1E-171 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 Gene3D G3DSA:3.20.20.140 1 277 3.3E-114 T 14-10-2018 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 Gene3D G3DSA:1.10.150.870 770 877 1.1E-6 T 14-10-2018 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 SUPERFAMILY SSF89550 5 270 2.35E-38 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JO40_03300 47e56ba270bca52baca0c1e45cff13ae 1149 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1024 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 384 5.3E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 SUPERFAMILY SSF52540 59 392 1.78E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 Pfam PF06689 ClpX C4-type zinc finger 11 47 3.7E-13 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 Gene3D G3DSA:1.10.8.60 311 411 4.0E-35 T 14-10-2018 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 Gene3D G3DSA:3.40.50.300 56 310 8.3E-107 T 14-10-2018 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 SMART SM00382 108 270 7.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 SMART SM00994 9 49 4.8E-13 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 410 48.917 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 2.8E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 SMART SM01086 312 403 1.6E-28 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 400 7.4E-185 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 Gene3D G3DSA:3.30.50.30 2 48 9.0E-11 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily JO40_10815 6ccd2cf46b82cb09bbebd88da0bf0c7e 415 SUPERFAMILY SSF57716 10 46 9.55E-6 T 14-10-2018 JO40_05255 ba493aa6b481c38839a8ccd668521eac 259 SUPERFAMILY SSF56219 14 252 5.5E-20 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_05255 ba493aa6b481c38839a8ccd668521eac 259 Gene3D G3DSA:3.60.10.10 13 257 8.4E-18 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_08380 508d9c4b3bdae846c18f7826a5399b6e 871 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 39 287 5.0E-15 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_08380 508d9c4b3bdae846c18f7826a5399b6e 871 SUPERFAMILY SSF53850 37 392 4.71E-28 T 14-10-2018 JO40_08380 508d9c4b3bdae846c18f7826a5399b6e 871 Gene3D G3DSA:3.40.190.10 39 373 4.8E-20 T 14-10-2018 JO40_08380 508d9c4b3bdae846c18f7826a5399b6e 871 Gene3D G3DSA:3.10.105.10 95 364 4.8E-20 T 14-10-2018 JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 Gene3D G3DSA:3.40.50.720 1 244 1.4E-49 T 14-10-2018 JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 Pfam PF00106 short chain dehydrogenase 3 186 4.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 SUPERFAMILY SSF51735 3 259 3.51E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 5.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 5.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 5.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_07345 6ffcc4cd8a32a03ead8fd96bacf8ce03 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 5.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO40_07710 6e2e0a75093088c81396cdf53d80d751 231 PIRSF PIRSF005650 1 231 2.8E-48 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 JO40_07710 6e2e0a75093088c81396cdf53d80d751 231 TIGRFAM TIGR02076 pyrH_arch: putative uridylate kinase 4 230 1.2E-53 T 14-10-2018 IPR011818 Uridylate kinase, archaeal/spirochete, putative GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 JO40_07710 6e2e0a75093088c81396cdf53d80d751 231 Pfam PF00696 Amino acid kinase family 1 207 2.5E-21 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JO40_07710 6e2e0a75093088c81396cdf53d80d751 231 Gene3D G3DSA:3.40.1160.10 3 230 2.2E-43 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO40_07710 6e2e0a75093088c81396cdf53d80d751 231 SUPERFAMILY SSF53633 2 230 2.09E-30 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO40_00810 e4fc96e7cead6777eb96b7b3fbd60903 469 Gene3D G3DSA:1.20.1600.10 304 468 2.8E-11 T 14-10-2018 JO40_00810 e4fc96e7cead6777eb96b7b3fbd60903 469 Pfam PF02321 Outer membrane efflux protein 342 462 3.3E-6 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JO40_00810 e4fc96e7cead6777eb96b7b3fbd60903 469 SUPERFAMILY SSF56954 38 467 9.16E-13 T 14-10-2018 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 9.5E-38 T 14-10-2018 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 9.5E-38 T 14-10-2018 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.5E-38 T 14-10-2018 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 9.5E-38 T 14-10-2018 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 9.5E-38 T 14-10-2018 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 306 3.5E-111 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 Gene3D G3DSA:3.50.50.60 8 300 1.5E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 2.7E-68 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 295 6.0E-57 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 SUPERFAMILY SSF51905 1 304 3.79E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 JO40_06605 385aa5caf37407aca9e3e3f21fdfeca7 317 Gene3D G3DSA:3.50.50.60 122 244 1.5E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_08280 df4f3a8607e7ca71b59b803bba366b48 403 SUPERFAMILY SSF53822 34 272 1.37E-31 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO40_08280 df4f3a8607e7ca71b59b803bba366b48 403 Gene3D G3DSA:3.40.50.2300 72 254 4.2E-32 T 14-10-2018 JO40_08280 df4f3a8607e7ca71b59b803bba366b48 403 Pfam PF13407 Periplasmic binding protein domain 39 260 1.3E-24 T 14-10-2018 IPR025997 Periplasmic binding protein JO40_00745 c2deb2ddcdccc073699f1d0a6015cea0 352 Pfam PF00953 Glycosyl transferase family 4 94 272 5.6E-30 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 JO40_00745 c2deb2ddcdccc073699f1d0a6015cea0 352 ProSitePatterns PS01348 MraY family signature 2. 176 187 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 513 543 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 SUPERFAMILY SSF53474 420 677 2.92E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 Pfam PF00326 Prolyl oligopeptidase family 468 679 5.6E-67 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 536 556 1.2E-56 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 592 607 1.2E-56 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 633 1.2E-56 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 452 470 1.2E-56 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 478 502 1.2E-56 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 506 525 1.2E-56 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 Gene3D G3DSA:3.40.50.1820 11 677 7.8E-247 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 406 2.3E-109 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 SUPERFAMILY SSF50993 4 408 3.4E-88 T 14-10-2018 JO40_13405 3b1f62b9959f80bae60160c8f0de80e5 682 Gene3D G3DSA:2.130.10.120 67 412 7.8E-247 T 14-10-2018 JO40_01430 3492de0c3a007bf1e8b9720671b68aa9 316 Gene3D G3DSA:2.70.70.10 152 314 1.8E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_01430 3492de0c3a007bf1e8b9720671b68aa9 316 SUPERFAMILY SSF51261 161 311 5.75E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_01430 3492de0c3a007bf1e8b9720671b68aa9 316 Pfam PF01551 Peptidase family M23 213 307 5.2E-28 T 14-10-2018 IPR016047 Peptidase M23 JO40_05590 e285ede76adb85a0daa01284414b21d7 137 Pfam PF13470 PIN domain 4 117 7.4E-11 T 14-10-2018 IPR002716 PIN domain JO40_05590 e285ede76adb85a0daa01284414b21d7 137 SUPERFAMILY SSF88723 1 133 2.39E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_05590 e285ede76adb85a0daa01284414b21d7 137 Gene3D G3DSA:3.40.50.1010 4 128 8.5E-6 T 14-10-2018 JO40_09470 1c540576c17fe253de773a5faf33de21 206 SUPERFAMILY SSF46689 6 69 1.28E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_09470 1c540576c17fe253de773a5faf33de21 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 3.9E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_09470 1c540576c17fe253de773a5faf33de21 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_09470 1c540576c17fe253de773a5faf33de21 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_09470 1c540576c17fe253de773a5faf33de21 206 Gene3D G3DSA:1.10.357.10 2 201 7.9E-18 T 14-10-2018 JO40_02810 dd38c18915ff4ae2e4b1049183431057 322 SUPERFAMILY SSF52540 6 287 2.23E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02810 dd38c18915ff4ae2e4b1049183431057 322 SMART SM00382 34 261 0.0013 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02810 dd38c18915ff4ae2e4b1049183431057 322 Gene3D G3DSA:3.40.50.300 1 195 7.8E-45 T 14-10-2018 JO40_02810 dd38c18915ff4ae2e4b1049183431057 322 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 173 2.1E-56 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JO40_02810 dd38c18915ff4ae2e4b1049183431057 322 Gene3D G3DSA:1.10.8.300 204 312 4.6E-21 T 14-10-2018 JO40_02810 dd38c18915ff4ae2e4b1049183431057 322 PIRSF PIRSF002849 1 316 3.4E-114 T 14-10-2018 JO40_02100 a38afc9e1fda887ac84e953ce861650d 353 Gene3D G3DSA:3.40.50.150 164 350 1.2E-42 T 14-10-2018 JO40_02100 a38afc9e1fda887ac84e953ce861650d 353 SUPERFAMILY SSF53335 162 322 2.76E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_02100 a38afc9e1fda887ac84e953ce861650d 353 Pfam PF01728 FtsJ-like methyltransferase 172 275 2.8E-6 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JO40_12940 f8b6fd94b28a95d220a13616661e3a4e 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 320 5.0E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_12940 f8b6fd94b28a95d220a13616661e3a4e 323 SMART SM00382 42 234 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12940 f8b6fd94b28a95d220a13616661e3a4e 323 Pfam PF00005 ABC transporter 33 184 9.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_12940 f8b6fd94b28a95d220a13616661e3a4e 323 SUPERFAMILY SSF52540 21 256 1.97E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12940 f8b6fd94b28a95d220a13616661e3a4e 323 Gene3D G3DSA:3.40.50.300 4 323 1.1E-96 T 14-10-2018 JO40_12940 f8b6fd94b28a95d220a13616661e3a4e 323 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_12940 f8b6fd94b28a95d220a13616661e3a4e 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 9.6E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 Gene3D G3DSA:3.40.50.150 45 297 5.4E-66 T 14-10-2018 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 75 80 - T 14-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 SUPERFAMILY SSF53335 54 288 1.17E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 102 122 1.8E-30 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 226 243 1.8E-30 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 245 263 1.8E-30 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 70 84 1.8E-30 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 268 288 1.8E-30 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO40_08970 a73cb75e79960cb9c48d1e553d4c0670 298 Pfam PF01555 DNA methylase 72 285 3.2E-47 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JO40_10435 8eba98baaeb550e2032f361f27883f88 195 PIRSF PIRSF004553 1 177 9.8E-57 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JO40_10435 8eba98baaeb550e2032f361f27883f88 195 Pfam PF03602 Conserved hypothetical protein 95 1 174 9.4E-43 T 14-10-2018 JO40_10435 8eba98baaeb550e2032f361f27883f88 195 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 175 2.3E-37 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JO40_10435 8eba98baaeb550e2032f361f27883f88 195 SUPERFAMILY SSF53335 1 174 1.22E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_10435 8eba98baaeb550e2032f361f27883f88 195 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 110 116 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_10435 8eba98baaeb550e2032f361f27883f88 195 Gene3D G3DSA:3.40.50.150 1 181 7.9E-45 T 14-10-2018 JO40_08295 921f1713516f9312890f83ee54e3fa78 356 Gene3D G3DSA:2.20.28.30 69 108 2.2E-5 T 14-10-2018 JO40_08295 921f1713516f9312890f83ee54e3fa78 356 Gene3D G3DSA:2.20.28.30 1 40 6.2E-6 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 340 431 8.1E-14 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 PRINTS PR01874 DNA repair protein radA signature 85 113 5.5E-77 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 PRINTS PR01874 DNA repair protein radA signature 128 145 5.5E-77 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 PRINTS PR01874 DNA repair protein radA signature 326 349 5.5E-77 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 PRINTS PR01874 DNA repair protein radA signature 13 37 5.5E-77 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 PRINTS PR01874 DNA repair protein radA signature 178 202 5.5E-77 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 PRINTS PR01874 DNA repair protein radA signature 251 277 5.5E-77 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 PRINTS PR01874 DNA repair protein radA signature 217 245 5.5E-77 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 SUPERFAMILY SSF54211 258 461 2.81E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 8.7E-142 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 SUPERFAMILY SSF52540 71 291 1.24E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 Gene3D G3DSA:3.40.50.300 68 285 2.6E-39 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 SMART SM00382 93 248 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 Gene3D G3DSA:3.30.230.10 307 461 7.3E-17 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 Pfam PF13481 AAA domain 82 226 6.4E-11 T 14-10-2018 JO40_01040 dac79fb1f34964d1d3243aa7bd5998e1 461 Hamap MF_01498 DNA repair protein RadA [radA]. 24 460 40.609 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JO40_00695 0b2b01079250a686e55bcfb3d0494fc6 78 PIRSF PIRSF006488 1 75 1.4E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO40_00695 0b2b01079250a686e55bcfb3d0494fc6 78 Pfam PF02609 Exonuclease VII small subunit 4 55 5.1E-15 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO40_00695 0b2b01079250a686e55bcfb3d0494fc6 78 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 3 66 12.007 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO40_00695 0b2b01079250a686e55bcfb3d0494fc6 78 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 3 58 4.3E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO40_00695 0b2b01079250a686e55bcfb3d0494fc6 78 SUPERFAMILY SSF116842 3 60 5.62E-14 T 14-10-2018 JO40_00695 0b2b01079250a686e55bcfb3d0494fc6 78 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 2 44 8.0E-11 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO40_00695 0b2b01079250a686e55bcfb3d0494fc6 78 Gene3D G3DSA:1.10.287.1040 1 70 1.6E-15 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 JO40_10665 5a98386c7fae080224f66b3db3d6dd9b 108 SUPERFAMILY SSF47729 7 101 1.47E-16 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO40_10665 5a98386c7fae080224f66b3db3d6dd9b 108 Gene3D G3DSA:4.10.520.10 1 100 9.7E-21 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO40_10665 5a98386c7fae080224f66b3db3d6dd9b 108 Pfam PF00216 Bacterial DNA-binding protein 6 95 1.1E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO40_10665 5a98386c7fae080224f66b3db3d6dd9b 108 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 3.7E-7 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO40_10665 5a98386c7fae080224f66b3db3d6dd9b 108 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 3.7E-7 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO40_10665 5a98386c7fae080224f66b3db3d6dd9b 108 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 3.7E-7 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO40_10665 5a98386c7fae080224f66b3db3d6dd9b 108 SMART SM00411 5 96 4.6E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO40_05060 ac7bc3c2751285e8e05c5f3c4192be99 255 Gene3D G3DSA:3.30.1330.30 2 80 1.3E-7 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JO40_05060 ac7bc3c2751285e8e05c5f3c4192be99 255 Gene3D G3DSA:3.40.1280.10 87 249 1.3E-37 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO40_05060 ac7bc3c2751285e8e05c5f3c4192be99 255 SMART SM00967 10 85 1.6E-10 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JO40_05060 ac7bc3c2751285e8e05c5f3c4192be99 255 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 11 84 7.1E-15 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JO40_05060 ac7bc3c2751285e8e05c5f3c4192be99 255 Pfam PF00588 SpoU rRNA Methylase family 102 245 1.2E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JO40_05060 ac7bc3c2751285e8e05c5f3c4192be99 255 SUPERFAMILY SSF55315 7 79 6.47E-11 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JO40_05060 ac7bc3c2751285e8e05c5f3c4192be99 255 SUPERFAMILY SSF75217 92 247 8.5E-31 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO40_04985 397430d566c406e5cef9829ae9d780aa 180 Gene3D G3DSA:1.10.1740.10 6 111 1.6E-11 T 14-10-2018 JO40_04985 397430d566c406e5cef9829ae9d780aa 180 Gene3D G3DSA:1.10.10.10 112 173 4.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_04985 397430d566c406e5cef9829ae9d780aa 180 Pfam PF04542 Sigma-70 region 2 19 84 1.3E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO40_04985 397430d566c406e5cef9829ae9d780aa 180 Pfam PF08281 Sigma-70, region 4 117 168 9.3E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO40_04985 397430d566c406e5cef9829ae9d780aa 180 SUPERFAMILY SSF88946 13 91 2.04E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO40_04985 397430d566c406e5cef9829ae9d780aa 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 171 2.7E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO40_04985 397430d566c406e5cef9829ae9d780aa 180 SUPERFAMILY SSF88659 109 173 3.36E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO40_09035 5bfa8e340fb0d618fd9d130f69e22332 397 SUPERFAMILY SSF109604 155 318 3.43E-17 T 14-10-2018 JO40_09035 5bfa8e340fb0d618fd9d130f69e22332 397 Gene3D G3DSA:1.10.3210.10 3 322 1.6E-49 T 14-10-2018 JO40_09035 5bfa8e340fb0d618fd9d130f69e22332 397 Pfam PF01966 HD domain 163 281 1.2E-9 T 14-10-2018 IPR006674 HD domain JO40_09035 5bfa8e340fb0d618fd9d130f69e22332 397 SMART SM00471 156 291 9.7E-5 T 14-10-2018 IPR003607 HD/PDEase domain JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 SMART SM01228 555 626 1.6E-37 T 14-10-2018 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 Gene3D G3DSA:1.10.150.570 578 628 2.6E-22 T 14-10-2018 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 Pfam PF13932 GidA associated domain 416 624 1.1E-70 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 376 399 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.9E-6 T 14-10-2018 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 1.9E-6 T 14-10-2018 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 628 38.36 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 626 2.5E-236 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 281 295 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 Gene3D G3DSA:3.50.50.60 326 473 1.6E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 Gene3D G3DSA:3.50.50.60 1 240 1.7E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 SUPERFAMILY SSF51905 6 269 1.38E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_01490 b293dacc23d69b2a0a61442b02ed8f90 628 Pfam PF01134 Glucose inhibited division protein A 8 404 1.0E-148 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 JO40_02415 48c275588011d8833ce79c542378b91d 625 SUPERFAMILY SSF103473 3 391 4.84E-34 T 14-10-2018 IPR036259 MFS transporter superfamily JO40_02415 48c275588011d8833ce79c542378b91d 625 Gene3D G3DSA:1.20.1250.20 3 398 2.3E-24 T 14-10-2018 JO40_02415 48c275588011d8833ce79c542378b91d 625 Pfam PF13347 MFS/sugar transport protein 13 394 4.1E-66 T 14-10-2018 JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 Pfam PF00664 ABC transporter transmembrane region 51 289 1.1E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 SUPERFAMILY SSF90123 21 350 1.96E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 Pfam PF00005 ABC transporter 390 538 2.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 Gene3D G3DSA:3.40.50.300 350 610 7.0E-79 T 14-10-2018 JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 SMART SM00382 398 584 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 SUPERFAMILY SSF52540 352 607 8.24E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 Gene3D G3DSA:1.20.1560.10 1 349 5.1E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08120 f2ed3c88c8e324aa323c50cb84119bc1 620 ProSitePatterns PS00211 ABC transporters family signature. 510 524 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 Pfam PF01467 Cytidylyltransferase-like 5 170 3.5E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 Gene3D G3DSA:3.40.50.620 1 205 1.6E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 Gene3D G3DSA:1.10.3210.10 211 400 4.3E-46 T 14-10-2018 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 SUPERFAMILY SSF52374 3 205 2.38E-44 T 14-10-2018 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 SUPERFAMILY SSF109604 210 390 1.47E-22 T 14-10-2018 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 197 27.245 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 SMART SM00471 225 356 1.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 196 1.7E-47 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 222 389 7.5E-30 T 14-10-2018 IPR005249 Conserved hypothetical protein CHP00488 JO40_10465 b9143029b9641e04db9d8cde3e423d1b 402 Pfam PF01966 HD domain 229 345 1.8E-10 T 14-10-2018 IPR006674 HD domain JO40_03620 783c4083da82481d1445833a06a8f737 503 Gene3D G3DSA:1.10.1060.10 36 182 3.0E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO40_03620 783c4083da82481d1445833a06a8f737 503 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 51 500 9.3E-200 T 14-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 JO40_03620 783c4083da82481d1445833a06a8f737 503 Gene3D G3DSA:3.50.50.60 281 434 7.6E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_03620 783c4083da82481d1445833a06a8f737 503 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 181 489 4.4E-37 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_03620 783c4083da82481d1445833a06a8f737 503 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 182 204 5.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_03620 783c4083da82481d1445833a06a8f737 503 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 319 343 5.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_03620 783c4083da82481d1445833a06a8f737 503 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 464 482 5.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO40_03620 783c4083da82481d1445833a06a8f737 503 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 58 168 2.6E-40 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 JO40_03620 783c4083da82481d1445833a06a8f737 503 SUPERFAMILY SSF46548 37 191 9.94E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO40_03620 783c4083da82481d1445833a06a8f737 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 454 476 2.3E-19 T 14-10-2018 JO40_03620 783c4083da82481d1445833a06a8f737 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 426 442 2.3E-19 T 14-10-2018 JO40_03620 783c4083da82481d1445833a06a8f737 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 323 341 2.3E-19 T 14-10-2018 JO40_03620 783c4083da82481d1445833a06a8f737 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 202 2.3E-19 T 14-10-2018 JO40_03620 783c4083da82481d1445833a06a8f737 503 SUPERFAMILY SSF51971 179 434 4.59E-64 T 14-10-2018 JO40_03620 783c4083da82481d1445833a06a8f737 503 Gene3D G3DSA:3.50.50.60 184 496 7.6E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_04585 4b2b36b22e13c2112fa219f275702d75 325 SUPERFAMILY SSF53850 55 320 1.3E-30 T 14-10-2018 JO40_04585 4b2b36b22e13c2112fa219f275702d75 325 Pfam PF09084 NMT1/THI5 like 71 259 4.3E-13 T 14-10-2018 IPR015168 SsuA/THI5-like JO40_04585 4b2b36b22e13c2112fa219f275702d75 325 Gene3D G3DSA:3.40.190.10 37 320 1.1E-83 T 14-10-2018 JO40_04585 4b2b36b22e13c2112fa219f275702d75 325 Gene3D G3DSA:3.40.190.10 111 219 1.1E-83 T 14-10-2018 JO40_04585 4b2b36b22e13c2112fa219f275702d75 325 PIRSF PIRSF027386 1 324 4.7E-119 T 14-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type JO40_01600 46854b2a6e1cfa70244a644aca0645f4 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 353 1.3E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 JO40_11470 72d3e345bd74edf47c208d47a9e0e881 974 SUPERFAMILY SSF52540 8 296 6.69E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11470 72d3e345bd74edf47c208d47a9e0e881 974 Gene3D G3DSA:3.40.50.300 314 525 5.1E-9 T 14-10-2018 JO40_11470 72d3e345bd74edf47c208d47a9e0e881 974 Gene3D G3DSA:3.40.50.300 2 246 2.4E-13 T 14-10-2018 JO40_11470 72d3e345bd74edf47c208d47a9e0e881 974 Pfam PF04851 Type III restriction enzyme, res subunit 11 232 1.6E-21 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_11470 72d3e345bd74edf47c208d47a9e0e881 974 SUPERFAMILY SSF52540 58 504 3.06E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01280 d4f28e2d6d90bb3e82e6f583b38f5518 420 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 408 2.0E-99 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JO40_01280 d4f28e2d6d90bb3e82e6f583b38f5518 420 Pfam PF00860 Permease family 20 382 5.3E-79 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JO40_05275 645d132f779f4962ae49c306f2e42716 718 SUPERFAMILY SSF51445 149 589 1.02E-125 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_05275 645d132f779f4962ae49c306f2e42716 718 SUPERFAMILY SSF51011 606 714 5.58E-18 T 14-10-2018 JO40_05275 645d132f779f4962ae49c306f2e42716 718 SMART SM00642 174 583 1.9E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO40_05275 645d132f779f4962ae49c306f2e42716 718 Gene3D G3DSA:3.20.20.80 151 597 1.5E-170 T 14-10-2018 JO40_05275 645d132f779f4962ae49c306f2e42716 718 Gene3D G3DSA:2.60.40.1180 603 714 1.5E-22 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JO40_05275 645d132f779f4962ae49c306f2e42716 718 Pfam PF00128 Alpha amylase, catalytic domain 193 315 3.0E-11 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO40_05275 645d132f779f4962ae49c306f2e42716 718 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 108 1.7E-12 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JO40_05275 645d132f779f4962ae49c306f2e42716 718 Gene3D G3DSA:2.60.40.10 2 147 3.3E-34 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_05275 645d132f779f4962ae49c306f2e42716 718 SUPERFAMILY SSF81296 12 162 1.89E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set JO40_05275 645d132f779f4962ae49c306f2e42716 718 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 699 7.8E-221 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 JO40_01055 e91dac6a7bad0466448d04ac13fa7ede 273 SUPERFAMILY SSF52058 77 270 3.67E-27 T 14-10-2018 JO40_01055 e91dac6a7bad0466448d04ac13fa7ede 273 Gene3D G3DSA:3.80.10.10 48 272 2.5E-47 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.0E-113 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 SUPERFAMILY SSF52313 6 228 2.49E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 230 43.153 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 Gene3D G3DSA:3.40.50.10490 9 219 3.6E-92 T 14-10-2018 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 PRINTS PR00395 Ribosomal protein S2 signature 158 175 6.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 PRINTS PR00395 Ribosomal protein S2 signature 175 186 6.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 PRINTS PR00395 Ribosomal protein S2 signature 196 210 6.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 PRINTS PR00395 Ribosomal protein S2 signature 6 24 6.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 PRINTS PR00395 Ribosomal protein S2 signature 37 46 6.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 PRINTS PR00395 Ribosomal protein S2 signature 87 104 6.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 Pfam PF00318 Ribosomal protein S2 9 224 3.6E-99 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JO40_00080 02dc85b45297f4e6c222c53ed46ab74c 291 Gene3D G3DSA:1.10.287.610 103 150 3.6E-92 T 14-10-2018 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 322 329 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 SUPERFAMILY SSF52949 9 158 1.82E-20 T 14-10-2018 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 476 31.398 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 Gene3D G3DSA:3.40.220.10 5 150 6.2E-20 T 14-10-2018 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 PRINTS PR00481 Cytosol aminopeptidase signature 296 317 2.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 PRINTS PR00481 Cytosol aminopeptidase signature 318 338 2.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 PRINTS PR00481 Cytosol aminopeptidase signature 237 254 2.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 PRINTS PR00481 Cytosol aminopeptidase signature 259 280 2.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 PRINTS PR00481 Cytosol aminopeptidase signature 347 362 2.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 SUPERFAMILY SSF53187 156 472 2.48E-109 T 14-10-2018 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 161 468 6.7E-113 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 Gene3D G3DSA:3.40.630.10 151 475 9.0E-120 T 14-10-2018 JO40_04445 864cc3b68044c9acaaaec9846e34c35f 476 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 17 124 2.5E-17 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JO40_04240 5732097254b39fb4e4e012271ff798a8 351 SUPERFAMILY SSF47240 23 348 8.11E-94 T 14-10-2018 IPR009078 Ferritin-like superfamily JO40_04240 5732097254b39fb4e4e012271ff798a8 351 Gene3D G3DSA:1.10.620.20 11 324 1.5E-96 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JO40_04240 5732097254b39fb4e4e012271ff798a8 351 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 123 139 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04240 5732097254b39fb4e4e012271ff798a8 351 Pfam PF00268 Ribonucleotide reductase, small chain 36 314 3.5E-85 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_04240 5732097254b39fb4e4e012271ff798a8 351 PIRSF PIRSF000355 4 351 9.6E-128 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO40_10930 fe3a1c63ae186346bf724cda65e6ee58 339 Gene3D G3DSA:3.40.50.720 5 276 1.0E-139 T 14-10-2018 JO40_10930 fe3a1c63ae186346bf724cda65e6ee58 339 SUPERFAMILY SSF51735 3 336 6.62E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_10930 fe3a1c63ae186346bf724cda65e6ee58 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 5.9E-134 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 JO40_10930 fe3a1c63ae186346bf724cda65e6ee58 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 326 2.6E-62 T 14-10-2018 IPR016040 NAD(P)-binding domain JO40_10930 fe3a1c63ae186346bf724cda65e6ee58 339 Gene3D G3DSA:3.90.25.10 195 331 1.0E-139 T 14-10-2018 JO40_12095 6c6c8a75a27eef1e83ec48937402e734 178 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 176 1.8E-36 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_12095 6c6c8a75a27eef1e83ec48937402e734 178 Pfam PF00717 Peptidase S24-like 31 101 3.3E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JO40_12095 6c6c8a75a27eef1e83ec48937402e734 178 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 1.6E-8 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_12095 6c6c8a75a27eef1e83ec48937402e734 178 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 86 98 1.6E-8 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_12095 6c6c8a75a27eef1e83ec48937402e734 178 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 140 159 1.6E-8 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO40_12095 6c6c8a75a27eef1e83ec48937402e734 178 SUPERFAMILY SSF51306 25 175 1.24E-32 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO40_06370 974cf53906e21b13fb9be5fbec16e0e4 286 Gene3D G3DSA:3.30.2010.10 75 159 1.6E-8 T 14-10-2018 JO40_06370 974cf53906e21b13fb9be5fbec16e0e4 286 Pfam PF01435 Peptidase family M48 90 264 1.2E-31 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JO40_08470 5ebf38bb63d3796b9599fe2f570e9b6a 289 Pfam PF02401 LytB protein 3 286 4.1E-83 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JO40_08470 5ebf38bb63d3796b9599fe2f570e9b6a 289 Gene3D G3DSA:3.40.1010.20 6 283 8.8E-86 T 14-10-2018 JO40_08470 5ebf38bb63d3796b9599fe2f570e9b6a 289 Gene3D G3DSA:3.40.50.11270 12 102 8.8E-86 T 14-10-2018 JO40_08470 5ebf38bb63d3796b9599fe2f570e9b6a 289 Gene3D G3DSA:3.40.1010.20 103 204 8.8E-86 T 14-10-2018 JO40_08470 5ebf38bb63d3796b9599fe2f570e9b6a 289 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 289 31.051 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JO40_08470 5ebf38bb63d3796b9599fe2f570e9b6a 289 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 288 4.6E-84 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JO40_07720 bdf0ed160ce96b2077cbb7d00dd3964e 183 Gene3D G3DSA:3.30.750.24 24 137 9.7E-22 T 14-10-2018 IPR036513 STAS domain superfamily JO40_07720 bdf0ed160ce96b2077cbb7d00dd3964e 183 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 28 122 2.0E-16 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 JO40_07720 bdf0ed160ce96b2077cbb7d00dd3964e 183 SUPERFAMILY SSF52091 28 128 4.51E-21 T 14-10-2018 IPR036513 STAS domain superfamily JO40_07720 bdf0ed160ce96b2077cbb7d00dd3964e 183 Pfam PF01740 STAS domain 27 126 3.6E-17 T 14-10-2018 IPR002645 STAS domain JO40_05730 5f827fdbea74a954acd7b1c09b70a715 259 SUPERFAMILY SSF52949 83 255 3.53E-55 T 14-10-2018 JO40_05730 5f827fdbea74a954acd7b1c09b70a715 259 SMART SM00506 82 222 2.7E-28 T 14-10-2018 IPR002589 Macro domain JO40_05730 5f827fdbea74a954acd7b1c09b70a715 259 Gene3D G3DSA:3.40.220.10 55 259 1.8E-68 T 14-10-2018 JO40_05730 5f827fdbea74a954acd7b1c09b70a715 259 Pfam PF01661 Macro domain 99 222 1.6E-36 T 14-10-2018 IPR002589 Macro domain JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 SUPERFAMILY SSF51604 162 411 1.28E-84 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 411 1.6E-190 T 14-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 PIRSF PIRSF017107 1 412 7.1E-201 T 14-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 SUPERFAMILY SSF54826 1 159 1.08E-62 T 14-10-2018 JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 Gene3D G3DSA:3.30.390.10 1 164 4.5E-73 T 14-10-2018 IPR029017 Enolase-like, N-terminal JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 163 410 6.9E-123 T 14-10-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 1.2E-76 T 14-10-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 JO40_01075 2237a023103a20a30b25de37b9aca6b9 412 Gene3D G3DSA:3.20.20.120 165 412 2.7E-105 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 PIRSF PIRSF002144 1 92 9.6E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 SUPERFAMILY SSF54570 2 84 1.7E-34 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 Pfam PF00203 Ribosomal protein S19 3 83 2.1E-35 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 90 2.5E-45 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 Gene3D G3DSA:3.30.860.10 1 92 2.0E-37 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.089 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.1E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.1E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02285 8fea6bc692e7c7628d35fcc7b0fbfb82 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.1E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 Gene3D G3DSA:3.40.50.300 15 203 2.9E-75 T 14-10-2018 JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 15 295 8.9E-52 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 Pfam PF01715 IPP transferase 47 287 4.3E-57 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 SUPERFAMILY SSF52540 15 233 1.29E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 SUPERFAMILY SSF52540 15 129 3.3E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 Gene3D G3DSA:1.10.287.890 204 286 2.9E-75 T 14-10-2018 JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 14 298 22.639 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JO40_12195 1ef7156e35aa99c9df6a142b4a64eb47 298 Gene3D G3DSA:1.10.20.140 124 192 2.9E-75 T 14-10-2018 JO40_09495 a52a4cb5913303135047ab2cb13dd27b 94 Gene3D G3DSA:3.40.1620.10 7 46 3.4E-6 T 14-10-2018 JO40_09495 a52a4cb5913303135047ab2cb13dd27b 94 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 56 6.9E-10 T 14-10-2018 JO40_09495 a52a4cb5913303135047ab2cb13dd27b 94 SUPERFAMILY SSF143120 9 83 5.89E-17 T 14-10-2018 IPR036165 YefM-like superfamily JO40_09495 a52a4cb5913303135047ab2cb13dd27b 94 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 78 2.6E-16 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO40_00905 af0e34485c2822b87d37e881c49116aa 397 Gene3D G3DSA:1.20.1250.20 8 187 1.4E-18 T 14-10-2018 JO40_00905 af0e34485c2822b87d37e881c49116aa 397 Gene3D G3DSA:1.20.1250.20 191 378 3.7E-23 T 14-10-2018 JO40_00905 af0e34485c2822b87d37e881c49116aa 397 SUPERFAMILY SSF103473 1 381 8.63E-47 T 14-10-2018 IPR036259 MFS transporter superfamily JO40_00905 af0e34485c2822b87d37e881c49116aa 397 Pfam PF07690 Major Facilitator Superfamily 14 290 2.0E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JO40_08300 753899040cbf136d1b052701e7b47898 406 Pfam PF13240 zinc-ribbon domain 385 406 2.2E-8 T 14-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 JO40_08300 753899040cbf136d1b052701e7b47898 406 Pfam PF13421 SPFH domain-Band 7 family 55 268 2.7E-23 T 14-10-2018 IPR033880 SPFH domain, YdjI-like JO40_08300 753899040cbf136d1b052701e7b47898 406 SUPERFAMILY SSF117892 163 270 2.75E-5 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO40_02645 0828e24a6747191f156c7dbd01475f26 538 SUPERFAMILY SSF52540 30 201 2.12E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02645 0828e24a6747191f156c7dbd01475f26 538 Pfam PF09820 Predicted AAA-ATPase 8 293 1.6E-99 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_02645 0828e24a6747191f156c7dbd01475f26 538 Gene3D G3DSA:3.40.50.300 24 222 3.5E-5 T 14-10-2018 JO40_02645 0828e24a6747191f156c7dbd01475f26 538 Pfam PF08011 PD-(D/E)XK nuclease superfamily 439 532 5.0E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_06900 bd35ad9d05ccdac4398f76664f6572a7 616 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 356 443 2.2E-6 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_06900 bd35ad9d05ccdac4398f76664f6572a7 616 Gene3D G3DSA:3.40.120.10 22 174 8.4E-19 T 14-10-2018 JO40_06900 bd35ad9d05ccdac4398f76664f6572a7 616 Gene3D G3DSA:3.40.120.10 334 429 1.1E-9 T 14-10-2018 JO40_06900 bd35ad9d05ccdac4398f76664f6572a7 616 SUPERFAMILY SSF53738 355 444 1.0E-4 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_06900 bd35ad9d05ccdac4398f76664f6572a7 616 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 50 159 1.7E-16 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_06900 bd35ad9d05ccdac4398f76664f6572a7 616 SUPERFAMILY SSF53738 15 206 2.59E-20 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO40_06900 bd35ad9d05ccdac4398f76664f6572a7 616 Gene3D G3DSA:3.40.120.10 234 442 1.1E-9 T 14-10-2018 JO40_08865 12b83468fc20a9e5cd8da3abe116e359 304 Gene3D G3DSA:3.40.50.1820 2 304 1.3E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_08865 12b83468fc20a9e5cd8da3abe116e359 304 SUPERFAMILY SSF53474 2 304 1.97E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_08865 12b83468fc20a9e5cd8da3abe116e359 304 Pfam PF12146 Serine aminopeptidase, S33 24 288 2.4E-58 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JO40_03930 0528eec29e9ecd695a81e471d0529a64 284 SUPERFAMILY SSF161098 74 260 7.19E-27 T 14-10-2018 IPR035906 MetI-like superfamily JO40_03930 0528eec29e9ecd695a81e471d0529a64 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 277 5.7E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_03930 0528eec29e9ecd695a81e471d0529a64 284 Gene3D G3DSA:1.10.3720.10 68 274 7.3E-21 T 14-10-2018 IPR035906 MetI-like superfamily JO40_11190 a2c78e08d5e98f3901c7aae945a9e8f2 523 Pfam PF13186 Iron-sulfur cluster-binding domain 453 516 2.4E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JO40_11190 a2c78e08d5e98f3901c7aae945a9e8f2 523 SUPERFAMILY SSF102114 261 516 3.45E-14 T 14-10-2018 JO40_11190 a2c78e08d5e98f3901c7aae945a9e8f2 523 TIGRFAM TIGR04321 spiroSPASM: spiro-SPASM protein 4 523 1.2E-186 T 14-10-2018 IPR027608 Spirochetes SPASM protein JO40_10530 b8d7e39dbb59b57871c2ee42d611ea2d 841 SUPERFAMILY SSF53955 45 248 3.37E-62 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO40_10530 b8d7e39dbb59b57871c2ee42d611ea2d 841 Pfam PF00905 Penicillin binding protein transpeptidase domain 415 677 3.1E-19 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO40_10530 b8d7e39dbb59b57871c2ee42d611ea2d 841 SUPERFAMILY SSF56601 215 781 3.54E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO40_10530 b8d7e39dbb59b57871c2ee42d611ea2d 841 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 726 5.9E-166 T 14-10-2018 JO40_10530 b8d7e39dbb59b57871c2ee42d611ea2d 841 Pfam PF00912 Transglycosylase 58 233 4.1E-55 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_10530 b8d7e39dbb59b57871c2ee42d611ea2d 841 Gene3D G3DSA:1.10.3810.10 51 249 3.0E-62 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_09530 5f66221e37bae2a822b6994bc3b8432a 594 Gene3D G3DSA:3.40.50.300 341 594 1.3E-64 T 14-10-2018 JO40_09530 5f66221e37bae2a822b6994bc3b8432a 594 Pfam PF00005 ABC transporter 366 519 5.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09530 5f66221e37bae2a822b6994bc3b8432a 594 SUPERFAMILY SSF90123 12 307 5.76E-20 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_09530 5f66221e37bae2a822b6994bc3b8432a 594 SMART SM00382 374 581 5.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09530 5f66221e37bae2a822b6994bc3b8432a 594 Gene3D G3DSA:1.20.1560.10 2 331 3.3E-12 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_09530 5f66221e37bae2a822b6994bc3b8432a 594 SUPERFAMILY SSF52540 341 589 3.87E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 SMART SM00490 460 547 2.5E-10 T 14-10-2018 IPR001650 Helicase, C-terminal JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 Gene3D G3DSA:3.40.50.300 400 594 3.7E-50 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 SMART SM00487 218 402 3.3E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 Pfam PF13625 Helicase conserved C-terminal domain 7 100 9.3E-33 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 338 358 6.2E-35 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 403 425 6.2E-35 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 236 258 6.2E-35 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 522 547 6.2E-35 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 5 25 6.2E-35 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 440 455 6.2E-35 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 503 521 6.2E-35 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 Pfam PF04851 Type III restriction enzyme, res subunit 219 373 2.0E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 Gene3D G3DSA:3.40.50.300 211 399 3.9E-32 T 14-10-2018 JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 SUPERFAMILY SSF52540 268 566 1.23E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04795 6c777b3e3e2e80978ed6d56522a28e57 595 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 399 588 1.4E-46 T 14-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 JO40_10110 2c40efe0fe1e13287a35ec0ea84e5a21 397 Pfam PF13349 Putative adhesin 81 259 5.7E-18 T 14-10-2018 IPR025164 Putative adhesin JO40_10110 2c40efe0fe1e13287a35ec0ea84e5a21 397 Pfam PF08006 Protein of unknown function (DUF1700) 1 70 8.2E-10 T 14-10-2018 IPR012963 Protein of unknown function DUF1700 JO40_01830 e37da50e0de15539ee6a815e2a7ac103 121 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 109 1.5E-36 T 14-10-2018 IPR004260 Pyrimidine dimer DNA glycosylase JO40_01830 e37da50e0de15539ee6a815e2a7ac103 121 TIGRFAM TIGR02328 TIGR02328: conserved hypothetical protein 1 120 2.6E-62 T 14-10-2018 IPR012650 Conserved hypothetical protein CHP02328 JO40_01830 e37da50e0de15539ee6a815e2a7ac103 121 SUPERFAMILY SSF47077 10 94 4.71E-6 T 14-10-2018 JO40_09715 d996e751510fc4299419eeaa4e540ee3 433 Pfam PF01467 Cytidylyltransferase-like 12 97 8.0E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO40_09715 d996e751510fc4299419eeaa4e540ee3 433 SUPERFAMILY SSF52374 12 130 1.49E-13 T 14-10-2018 JO40_09715 d996e751510fc4299419eeaa4e540ee3 433 Gene3D G3DSA:3.40.50.620 2 134 1.3E-24 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_09715 d996e751510fc4299419eeaa4e540ee3 433 Gene3D G3DSA:3.20.20.60 135 432 2.2E-71 T 14-10-2018 JO40_09715 d996e751510fc4299419eeaa4e540ee3 433 TIGRFAM TIGR02320 PEP_mutase: phosphoenolpyruvate mutase 149 432 2.2E-125 T 14-10-2018 IPR012698 Phosphoenolpyruvate phosphomutase, core GO:0050188 KEGG: 00440+5.4.2.9|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7419|MetaCyc: PWY-7510|MetaCyc: PWY-7769 JO40_09715 d996e751510fc4299419eeaa4e540ee3 433 SUPERFAMILY SSF51621 95 432 3.24E-67 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO40_09715 d996e751510fc4299419eeaa4e540ee3 433 Pfam PF13714 Phosphoenolpyruvate phosphomutase 149 407 5.5E-65 T 14-10-2018 JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 Gene3D G3DSA:3.40.50.300 323 576 3.8E-87 T 14-10-2018 JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 Pfam PF00005 ABC transporter 353 501 1.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 SMART SM00382 361 547 3.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 SUPERFAMILY SSF52540 326 571 8.04E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 Gene3D G3DSA:1.20.1560.10 2 322 1.5E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 Pfam PF00664 ABC transporter transmembrane region 60 289 7.7E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_08125 94ef525acb06b6dca9b47d2757d90d24 579 SUPERFAMILY SSF90123 19 319 7.46E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06930 02ea07f6d28b80a8fa4575d498393338 449 Pfam PF01554 MatE 241 401 4.2E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_06930 02ea07f6d28b80a8fa4575d498393338 449 Pfam PF01554 MatE 19 178 2.0E-37 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_06930 02ea07f6d28b80a8fa4575d498393338 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 413 6.6E-91 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_06930 02ea07f6d28b80a8fa4575d498393338 449 PIRSF PIRSF006603 1 448 4.6E-126 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_03285 678e699e974f65cd04a6216a0c781f35 594 SUPERFAMILY SSF90123 5 341 7.32E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03285 678e699e974f65cd04a6216a0c781f35 594 SMART SM00382 379 565 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03285 678e699e974f65cd04a6216a0c781f35 594 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03285 678e699e974f65cd04a6216a0c781f35 594 SUPERFAMILY SSF52540 346 589 1.02E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03285 678e699e974f65cd04a6216a0c781f35 594 Pfam PF00005 ABC transporter 370 517 2.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03285 678e699e974f65cd04a6216a0c781f35 594 Gene3D G3DSA:3.40.50.300 342 594 1.4E-80 T 14-10-2018 JO40_03285 678e699e974f65cd04a6216a0c781f35 594 Pfam PF00664 ABC transporter transmembrane region 19 308 9.3E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_03285 678e699e974f65cd04a6216a0c781f35 594 Gene3D G3DSA:1.20.1560.10 4 336 1.5E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_06155 d89b8a83d37808fcc61cfb25c0095e98 695 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 4 85 3.5E-6 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO40_06155 d89b8a83d37808fcc61cfb25c0095e98 695 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 127 630 4.1E-59 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JO40_06155 d89b8a83d37808fcc61cfb25c0095e98 695 Gene3D G3DSA:3.30.365.10 2 689 4.0E-87 T 14-10-2018 JO40_06155 d89b8a83d37808fcc61cfb25c0095e98 695 SMART SM01008 4 103 5.1E-4 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO40_06155 d89b8a83d37808fcc61cfb25c0095e98 695 SUPERFAMILY SSF54665 4 98 7.59E-14 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily JO40_06155 d89b8a83d37808fcc61cfb25c0095e98 695 SUPERFAMILY SSF56003 128 687 8.5E-106 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 JO40_10220 7b2a24c602debdb6dc1f7e24e426799b 367 Pfam PF12686 Protein of unknown function (DUF3800) 3 305 6.0E-8 T 14-10-2018 IPR024524 Protein of unknown function DUF3800 JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 Gene3D G3DSA:3.40.50.1820 1 311 4.1E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 2.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 2.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 2.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 PIRSF PIRSF006431 1 313 3.8E-131 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 SUPERFAMILY SSF53474 4 294 2.7E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 11 308 1.4E-112 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 JO40_03260 8d815ea6ac55112d16a8c029cbee663c 313 Pfam PF00561 alpha/beta hydrolase fold 35 293 2.1E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_04790 263e9464e7954aa87f486d1e6e03c456 278 Pfam PF04452 RNA methyltransferase 39 271 3.8E-54 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JO40_04790 263e9464e7954aa87f486d1e6e03c456 278 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 24 270 3.0E-32 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JO40_04790 263e9464e7954aa87f486d1e6e03c456 278 SUPERFAMILY SSF75217 107 277 6.54E-32 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO40_04790 263e9464e7954aa87f486d1e6e03c456 278 PIRSF PIRSF015601 21 277 5.4E-44 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JO40_04790 263e9464e7954aa87f486d1e6e03c456 278 Gene3D G3DSA:3.40.1280.10 23 276 4.1E-31 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO40_09095 b262d6306cff164be035a004686edf5a 767 Pfam PF07697 7TM-HD extracellular 61 299 2.6E-32 T 14-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain JO40_09095 b262d6306cff164be035a004686edf5a 767 SMART SM00471 524 678 1.6E-8 T 14-10-2018 IPR003607 HD/PDEase domain JO40_09095 b262d6306cff164be035a004686edf5a 767 Pfam PF07698 7TM receptor with intracellular HD hydrolase 314 503 1.6E-27 T 14-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain JO40_09095 b262d6306cff164be035a004686edf5a 767 SUPERFAMILY SSF109604 527 671 1.07E-16 T 14-10-2018 JO40_09095 b262d6306cff164be035a004686edf5a 767 Pfam PF01966 HD domain 528 668 5.8E-20 T 14-10-2018 IPR006674 HD domain JO40_09095 b262d6306cff164be035a004686edf5a 767 TIGRFAM TIGR00277 HDIG: HDIG domain 526 623 2.6E-28 T 14-10-2018 IPR006675 HDIG domain JO40_09095 b262d6306cff164be035a004686edf5a 767 Gene3D G3DSA:1.10.3210.10 518 708 2.1E-20 T 14-10-2018 JO40_06875 d3cafcb7bfdc3c0d801ab22e082ae5ec 138 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 122 2.3E-13 T 14-10-2018 JO40_06875 d3cafcb7bfdc3c0d801ab22e082ae5ec 138 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 137 5.6E-29 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_00950 603acc3a30db52928a6c97cf72228269 550 SUPERFAMILY SSF52540 283 480 2.95E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00950 603acc3a30db52928a6c97cf72228269 550 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 286 484 4.8E-18 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 JO40_00950 603acc3a30db52928a6c97cf72228269 550 PRINTS PR00988 Uridine kinase signature 316 327 1.6E-7 T 14-10-2018 JO40_00950 603acc3a30db52928a6c97cf72228269 550 PRINTS PR00988 Uridine kinase signature 284 301 1.6E-7 T 14-10-2018 JO40_00950 603acc3a30db52928a6c97cf72228269 550 PRINTS PR00988 Uridine kinase signature 361 376 1.6E-7 T 14-10-2018 JO40_00950 603acc3a30db52928a6c97cf72228269 550 Gene3D G3DSA:3.30.980.10 66 203 1.3E-17 T 14-10-2018 JO40_00950 603acc3a30db52928a6c97cf72228269 550 SMART SM00382 283 444 9.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00950 603acc3a30db52928a6c97cf72228269 550 SUPERFAMILY SSF55186 65 233 3.27E-30 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JO40_00950 603acc3a30db52928a6c97cf72228269 550 Gene3D G3DSA:3.40.50.300 225 496 3.2E-54 T 14-10-2018 JO40_02140 557fbb3ba56043f26dbc49bbf29822d4 207 Gene3D G3DSA:3.40.50.10230 2 207 3.5E-76 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 JO40_02140 557fbb3ba56043f26dbc49bbf29822d4 207 Pfam PF02570 Precorrin-8X methylmutase 8 202 2.2E-72 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 JO40_02140 557fbb3ba56043f26dbc49bbf29822d4 207 SUPERFAMILY SSF63965 7 206 2.09E-67 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 JO40_05420 dfc883030366669c0dedfdf61c4b5b5a 333 Gene3D G3DSA:1.20.120.1760 16 199 9.1E-13 T 14-10-2018 JO40_05420 dfc883030366669c0dedfdf61c4b5b5a 333 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 83 105 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO40_05420 dfc883030366669c0dedfdf61c4b5b5a 333 Pfam PF01066 CDP-alcohol phosphatidyltransferase 36 105 2.8E-10 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO40_13275 968ac4a8656f1edbbcc4b4fe28d6ee30 393 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 34 356 1.2E-49 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO40_13275 968ac4a8656f1edbbcc4b4fe28d6ee30 393 SUPERFAMILY SSF51445 21 374 3.16E-58 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_13275 968ac4a8656f1edbbcc4b4fe28d6ee30 393 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 276 293 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 JO40_13275 968ac4a8656f1edbbcc4b4fe28d6ee30 393 Gene3D G3DSA:3.20.20.300 19 380 4.1E-73 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 8.9E-15 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 8.9E-15 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 8.9E-15 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 Gene3D G3DSA:3.30.1340.10 1 88 3.1E-29 T 14-10-2018 IPR035895 HPr-like superfamily JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.9E-32 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.1E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 SUPERFAMILY SSF55594 1 87 6.41E-26 T 14-10-2018 IPR035895 HPr-like superfamily JO40_11020 1d6a5c599791748bb902a92a8629d8ce 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 SMART SM00567 E-Z type HEAT repeats 237 266 1.6E-4 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 SMART SM00567 E-Z type HEAT repeats 268 297 660.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 SMART SM00567 E-Z type HEAT repeats 331 360 120.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 SMART SM00567 E-Z type HEAT repeats 204 233 220.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 SUPERFAMILY SSF48371 130 351 1.68E-30 T 14-10-2018 IPR016024 Armadillo-type fold JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 Gene3D G3DSA:1.25.10.10 68 199 9.5E-6 T 14-10-2018 IPR011989 Armadillo-like helical JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 Gene3D G3DSA:1.25.10.10 200 378 1.8E-27 T 14-10-2018 IPR011989 Armadillo-like helical JO40_06500 23cdbb7bc92f52ab36349cab64b103ca 497 Pfam PF13646 HEAT repeats 207 278 9.5E-12 T 14-10-2018 JO40_05465 92e92e20648df60b22d2dfb3fcabc35b 600 SUPERFAMILY SSF90123 16 313 1.57E-17 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05465 92e92e20648df60b22d2dfb3fcabc35b 600 SUPERFAMILY SSF52540 339 587 6.31E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05465 92e92e20648df60b22d2dfb3fcabc35b 600 SMART SM00382 373 563 4.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05465 92e92e20648df60b22d2dfb3fcabc35b 600 Pfam PF00005 ABC transporter 365 517 5.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05465 92e92e20648df60b22d2dfb3fcabc35b 600 Gene3D G3DSA:1.20.1560.10 9 331 3.6E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05465 92e92e20648df60b22d2dfb3fcabc35b 600 Gene3D G3DSA:3.40.50.300 339 599 5.1E-71 T 14-10-2018 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 SUPERFAMILY SSF46911 26 98 2.09E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 Pfam PF01084 Ribosomal protein S18 43 93 3.2E-27 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 PRINTS PR00974 Ribosomal protein S18 family signature 71 85 9.4E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 PRINTS PR00974 Ribosomal protein S18 family signature 63 70 9.4E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 PRINTS PR00974 Ribosomal protein S18 family signature 53 63 9.4E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 PRINTS PR00974 Ribosomal protein S18 family signature 85 95 9.4E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 46 96 5.0E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 28 98 22.027 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 ProSitePatterns PS00057 Ribosomal protein S18 signature. 46 69 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 Gene3D G3DSA:4.10.640.10 15 99 1.3E-30 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10800 be0fbcc39067dc5da4dbdf75de9ee076 99 TIGRFAM TIGR00165 S18: ribosomal protein bS18 31 97 5.3E-33 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02215 813502addb22bdb80f9e5dbc44025456 150 Gene3D G3DSA:3.100.10.10 70 148 1.4E-22 T 14-10-2018 JO40_02215 813502addb22bdb80f9e5dbc44025456 150 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 146 7.7E-38 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P JO40_02215 813502addb22bdb80f9e5dbc44025456 150 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 145 1.9E-51 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02215 813502addb22bdb80f9e5dbc44025456 150 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02215 813502addb22bdb80f9e5dbc44025456 150 SUPERFAMILY SSF52080 5 146 4.58E-42 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily JO40_02215 813502addb22bdb80f9e5dbc44025456 150 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 4 148 20.063 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 JO40_03870 18be525fdefa5a72690d00f9190e1a26 349 Gene3D G3DSA:3.40.640.10 13 254 6.2E-108 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_03870 18be525fdefa5a72690d00f9190e1a26 349 SUPERFAMILY SSF53383 1 343 9.87E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_03870 18be525fdefa5a72690d00f9190e1a26 349 Gene3D G3DSA:3.90.1150.10 6 336 6.2E-108 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_03870 18be525fdefa5a72690d00f9190e1a26 349 Pfam PF01212 Beta-eliminating lyase 54 231 1.5E-24 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 Pfam PF00005 ABC transporter 266 422 2.6E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 Pfam PF00005 ABC transporter 15 161 5.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 Gene3D G3DSA:3.40.50.300 244 489 7.7E-41 T 14-10-2018 JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 Gene3D G3DSA:3.40.50.300 1 230 4.1E-56 T 14-10-2018 JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 SMART SM00382 23 217 7.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 SUPERFAMILY SSF52540 2 219 1.9E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_13165 ce08f9bc981ce2b32ebe5b8c4d99e4ce 498 SUPERFAMILY SSF52540 246 481 1.51E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SUPERFAMILY SSF48452 182 326 6.45E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SUPERFAMILY SSF48452 39 210 1.56E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Gene3D G3DSA:1.25.40.10 23 121 8.6E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Pfam PF00515 Tetratricopeptide repeat 180 208 4.4E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Pfam PF00515 Tetratricopeptide repeat 277 309 5.4E-11 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Pfam PF00515 Tetratricopeptide repeat 74 105 5.2E-9 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Pfam PF13181 Tetratricopeptide repeat 108 140 0.016 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Pfam PF13181 Tetratricopeptide repeat 244 272 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Gene3D G3DSA:1.25.40.10 122 206 1.4E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 Gene3D G3DSA:1.25.40.10 220 334 4.1E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SMART SM00028 107 140 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SMART SM00028 276 309 2.6E-9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SMART SM00028 141 174 0.27 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SMART SM00028 175 208 3.4E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SMART SM00028 39 72 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SMART SM00028 242 275 0.0011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06480 aa5f131e34fed9ff7d4efbb81e8f5abb 334 SMART SM00028 73 106 6.5E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_05225 a3294d20e975ca6d848282972c6ddb38 435 SUPERFAMILY SSF140683 1 75 3.27E-16 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily JO40_05225 a3294d20e975ca6d848282972c6ddb38 435 SUPERFAMILY SSF53850 127 403 9.88E-20 T 14-10-2018 JO40_05225 a3294d20e975ca6d848282972c6ddb38 435 Pfam PF13343 Bacterial extracellular solute-binding protein 167 415 9.8E-76 T 14-10-2018 JO40_05225 a3294d20e975ca6d848282972c6ddb38 435 Gene3D G3DSA:3.40.190.10 229 348 8.2E-13 T 14-10-2018 JO40_05225 a3294d20e975ca6d848282972c6ddb38 435 Gene3D G3DSA:3.40.190.10 209 396 8.2E-13 T 14-10-2018 JO40_05225 a3294d20e975ca6d848282972c6ddb38 435 Pfam PF08984 Domain of unknown function (DUF1858) 6 61 8.8E-13 T 14-10-2018 IPR015077 Domain of unknown function DUF1858 JO40_05225 a3294d20e975ca6d848282972c6ddb38 435 Gene3D G3DSA:1.10.3910.10 1 72 5.0E-15 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 Gene3D G3DSA:3.40.50.620 1 220 5.2E-82 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 405 41.508 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 404 5.1E-128 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 SUPERFAMILY SSF55174 297 404 4.24E-16 T 14-10-2018 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 6.6E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 6.6E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 6.6E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 6.6E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 SUPERFAMILY SSF52374 2 315 7.16E-96 T 14-10-2018 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 Gene3D G3DSA:3.10.290.10 322 405 9.3E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 Pfam PF00579 tRNA synthetases class I (W and Y) 29 316 1.5E-82 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_02065 384edfa365eb86845f8d8576368ea0f3 406 Gene3D G3DSA:1.10.240.10 221 321 1.4E-30 T 14-10-2018 JO40_01795 c437ad3ddb8f412828f5faadc5a4fa00 246 PIRSF PIRSF004848 1 236 5.2E-93 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JO40_01795 c437ad3ddb8f412828f5faadc5a4fa00 246 Gene3D G3DSA:3.20.20.10 1 241 1.8E-89 T 14-10-2018 IPR029066 PLP-binding barrel JO40_01795 c437ad3ddb8f412828f5faadc5a4fa00 246 SUPERFAMILY SSF51419 3 228 6.94E-73 T 14-10-2018 IPR029066 PLP-binding barrel JO40_01795 c437ad3ddb8f412828f5faadc5a4fa00 246 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 4 230 3.1E-57 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JO40_01795 c437ad3ddb8f412828f5faadc5a4fa00 246 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 3.5E-22 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO40_01795 c437ad3ddb8f412828f5faadc5a4fa00 246 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 229 27.663 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JO40_04115 ddbe56014da6eaa83039cb8564f77d26 99 SUPERFAMILY SSF47413 11 92 3.33E-22 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_04115 ddbe56014da6eaa83039cb8564f77d26 99 SMART SM00530 14 69 2.1E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_04115 ddbe56014da6eaa83039cb8564f77d26 99 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 82 1.4E-29 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 JO40_04115 ddbe56014da6eaa83039cb8564f77d26 99 Gene3D G3DSA:1.10.260.40 3 99 3.2E-28 T 14-10-2018 JO40_04115 ddbe56014da6eaa83039cb8564f77d26 99 Pfam PF01381 Helix-turn-helix 15 65 5.0E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 350 423 1.2E-7 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 Pfam PF01487 Type I 3-dehydroquinase 6 203 2.8E-33 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 SUPERFAMILY SSF53223 229 333 1.73E-25 T 14-10-2018 JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 Gene3D G3DSA:3.20.20.70 1 235 4.2E-36 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 SUPERFAMILY SSF51735 334 490 1.09E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 241 321 9.8E-20 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 Gene3D G3DSA:3.40.50.720 333 471 2.6E-69 T 14-10-2018 JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 SUPERFAMILY SSF51569 3 205 4.03E-33 T 14-10-2018 JO40_11515 c88ef7b59033cba6f1d425cadf7f3618 493 Gene3D G3DSA:3.40.50.10860 239 491 2.6E-69 T 14-10-2018 JO40_09610 8aba1ffce5343c717841932778132251 627 Pfam PF09095 Domain of unknown function (DUF1926) 421 581 8.0E-11 T 14-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 JO40_09610 8aba1ffce5343c717841932778132251 627 Gene3D G3DSA:2.70.98.10 418 588 6.2E-7 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JO40_09610 8aba1ffce5343c717841932778132251 627 Gene3D G3DSA:3.20.110.20 5 355 3.0E-49 T 14-10-2018 JO40_09610 8aba1ffce5343c717841932778132251 627 SUPERFAMILY SSF88713 9 271 3.15E-46 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JO40_09610 8aba1ffce5343c717841932778132251 627 Pfam PF03065 Glycosyl hydrolase family 57 30 243 8.8E-19 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 JO40_09610 8aba1ffce5343c717841932778132251 627 SUPERFAMILY SSF74650 367 579 1.1E-42 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JO40_06080 7dc91aed54afc809628bab459598731f 351 ProSitePatterns PS00211 ABC transporters family signature. 238 252 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_06080 7dc91aed54afc809628bab459598731f 351 Gene3D G3DSA:3.40.50.300 94 345 4.2E-25 T 14-10-2018 JO40_06080 7dc91aed54afc809628bab459598731f 351 SUPERFAMILY SSF52540 118 315 1.84E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06080 7dc91aed54afc809628bab459598731f 351 SMART SM00382 124 309 9.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06080 7dc91aed54afc809628bab459598731f 351 Pfam PF00005 ABC transporter 120 265 3.5E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08405 1334316b2ed89a1d821bebc33f288f31 263 Gene3D G3DSA:3.30.2350.10 5 247 1.1E-33 T 14-10-2018 JO40_08405 1334316b2ed89a1d821bebc33f288f31 263 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 67 81 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08405 1334316b2ed89a1d821bebc33f288f31 263 Pfam PF00849 RNA pseudouridylate synthase 20 197 6.9E-22 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08405 1334316b2ed89a1d821bebc33f288f31 263 SUPERFAMILY SSF55120 10 244 8.48E-34 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_00525 a7b9846a3ab73151a3e050bd52ad2842 422 Pfam PF04412 Protein of unknown function (DUF521) 1 416 5.3E-101 T 14-10-2018 IPR007506 Aconitase X catalytic domain, putative JO40_00935 ca0aad6d4769ce4f13ac2803379079df 281 TIGRFAM TIGR00444 mazG: MazG family protein 16 274 1.2E-73 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG JO40_00935 ca0aad6d4769ce4f13ac2803379079df 281 Gene3D G3DSA:1.10.287.1080 148 279 1.9E-40 T 14-10-2018 JO40_00935 ca0aad6d4769ce4f13ac2803379079df 281 SUPERFAMILY SSF101386 154 254 5.79E-23 T 14-10-2018 JO40_00935 ca0aad6d4769ce4f13ac2803379079df 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 110 3.1E-19 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JO40_00935 ca0aad6d4769ce4f13ac2803379079df 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 184 243 9.0E-11 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JO40_00935 ca0aad6d4769ce4f13ac2803379079df 281 Gene3D G3DSA:1.10.287.1080 5 144 1.2E-34 T 14-10-2018 JO40_00935 ca0aad6d4769ce4f13ac2803379079df 281 SUPERFAMILY SSF101386 9 114 8.67E-21 T 14-10-2018 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 SUPERFAMILY SSF51735 1 149 2.06E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 6.0E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 6.0E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 6.0E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 6.0E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 SUPERFAMILY SSF51735 231 392 2.6E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 SUPERFAMILY SSF116726 136 224 3.4E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Gene3D G3DSA:3.40.50.720 1 138 2.5E-37 T 14-10-2018 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Pfam PF02254 TrkA-N domain 233 365 7.0E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Pfam PF02254 TrkA-N domain 3 122 1.2E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Gene3D G3DSA:3.30.70.1450 140 226 4.1E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Gene3D G3DSA:3.30.70.1450 382 466 2.1E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 SUPERFAMILY SSF116726 377 464 4.97E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Gene3D G3DSA:3.40.50.720 231 380 3.9E-26 T 14-10-2018 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Pfam PF02080 TrkA-C domain 156 222 7.2E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO40_05005 55cd6dfbb03afcec02f35f900e611f1d 466 Pfam PF02080 TrkA-C domain 397 464 2.4E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO40_02120 8d78afec3157701f3200e5d7c7ad8400 231 Gene3D G3DSA:3.30.2010.10 136 228 4.4E-15 T 14-10-2018 JO40_02120 8d78afec3157701f3200e5d7c7ad8400 231 Pfam PF01863 Protein of unknown function DUF45 18 228 5.9E-55 T 14-10-2018 IPR002725 Protein of unknown function DUF45 JO40_09795 40a7544b663834a93ac933cf12b599f7 258 SUPERFAMILY SSF53448 1 257 1.06E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09795 40a7544b663834a93ac933cf12b599f7 258 Gene3D G3DSA:3.90.550.10 1 258 6.2E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09795 40a7544b663834a93ac933cf12b599f7 258 Pfam PF00483 Nucleotidyl transferase 2 206 1.1E-16 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JO40_09795 40a7544b663834a93ac933cf12b599f7 258 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 257 3.7E-124 T 14-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 JO40_04140 2eb135e535846c9d1d3f37a9fccbdb3d 295 Pfam PF00274 Fructose-bisphosphate aldolase class-I 12 205 6.2E-10 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_04140 2eb135e535846c9d1d3f37a9fccbdb3d 295 Hamap MF_00729 Fructose-bisphosphate aldolase class 1 [fda]. 2 294 52.415 T 14-10-2018 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 JO40_04140 2eb135e535846c9d1d3f37a9fccbdb3d 295 Gene3D G3DSA:3.20.20.70 1 295 2.8E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_04140 2eb135e535846c9d1d3f37a9fccbdb3d 295 SUPERFAMILY SSF51569 6 294 8.69E-94 T 14-10-2018 JO40_02005 6337c832883397996a9da37685ebf7fe 237 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 28 218 1.7E-36 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JO40_02005 6337c832883397996a9da37685ebf7fe 237 Hamap MF_02088 Probable queuosine precursor transporter. 16 224 17.338 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JO40_02005 6337c832883397996a9da37685ebf7fe 237 Pfam PF02592 Putative vitamin uptake transporter 53 211 5.2E-47 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JO40_06860 14192a8a758c26c478cd740d57217600 335 SUPERFAMILY SSF51395 1 333 1.07E-97 T 14-10-2018 JO40_06860 14192a8a758c26c478cd740d57217600 335 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 334 6.1E-74 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JO40_06860 14192a8a758c26c478cd740d57217600 335 Gene3D G3DSA:3.20.20.70 1 335 4.1E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_01895 e524a39c39297844ab46e9cbf17a419d 63 SUPERFAMILY SSF143800 1 61 9.22E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01895 e524a39c39297844ab46e9cbf17a419d 63 Gene3D G3DSA:2.30.170.40 2 63 1.9E-17 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01895 e524a39c39297844ab46e9cbf17a419d 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 1.8E-21 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_01895 e524a39c39297844ab46e9cbf17a419d 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 16.142 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_01895 e524a39c39297844ab46e9cbf17a419d 63 Pfam PF00830 Ribosomal L28 family 3 56 5.2E-21 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_06690 5ec3d325a4d19ca0daf5d135fae2e5ef 197 Gene3D G3DSA:1.20.120.1760 4 195 2.8E-8 T 14-10-2018 JO40_06690 5ec3d325a4d19ca0daf5d135fae2e5ef 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 3.3E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO40_06690 5ec3d325a4d19ca0daf5d135fae2e5ef 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 191 1.6E-37 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JO40_06690 5ec3d325a4d19ca0daf5d135fae2e5ef 197 PIRSF PIRSF000847 1 197 1.1E-51 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JO40_06690 5ec3d325a4d19ca0daf5d135fae2e5ef 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO40_07245 db1b0f44570f50df8941c1ca46cf963a 222 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 58 207 8.3E-12 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like JO40_07245 db1b0f44570f50df8941c1ca46cf963a 222 Gene3D G3DSA:2.50.20.10 29 215 4.6E-26 T 14-10-2018 JO40_07245 db1b0f44570f50df8941c1ca46cf963a 222 SUPERFAMILY SSF89392 27 214 1.33E-25 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 209 341 3.0E-59 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 Pfam PF01625 Peptide methionine sulfoxide reductase 41 189 5.3E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 39 194 34.71 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 SUPERFAMILY SSF51316 208 347 2.88E-56 T 14-10-2018 IPR011057 Mss4-like superfamily JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 40 188 5.5E-50 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 Gene3D G3DSA:2.170.150.20 202 350 5.6E-56 T 14-10-2018 JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 Pfam PF01641 SelR domain 212 332 2.1E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 SUPERFAMILY SSF55068 35 197 3.01E-61 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO40_06105 4f03375223db92f9149fbd0cbebced7e 354 Gene3D G3DSA:3.30.1060.10 38 201 3.3E-60 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO40_06270 842ed213a05efa13ea67c4333874ae1f 108 Gene3D G3DSA:1.10.1660.10 1 75 9.0E-18 T 14-10-2018 JO40_06270 842ed213a05efa13ea67c4333874ae1f 108 Pfam PF13411 MerR HTH family regulatory protein 4 68 4.9E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JO40_06270 842ed213a05efa13ea67c4333874ae1f 108 SUPERFAMILY SSF46955 4 92 6.41E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JO40_00285 7ac0db282a1042097d6f5d75514effff 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 302 1.9E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_00285 7ac0db282a1042097d6f5d75514effff 330 SMART SM00382 34 233 2.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00285 7ac0db282a1042097d6f5d75514effff 330 Gene3D G3DSA:3.40.50.300 3 328 1.7E-97 T 14-10-2018 JO40_00285 7ac0db282a1042097d6f5d75514effff 330 Pfam PF00005 ABC transporter 26 183 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00285 7ac0db282a1042097d6f5d75514effff 330 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00285 7ac0db282a1042097d6f5d75514effff 330 SUPERFAMILY SSF52540 5 248 1.69E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00285 7ac0db282a1042097d6f5d75514effff 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 321 4.3E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 Gene3D G3DSA:3.30.460.10 3 143 8.4E-48 T 14-10-2018 JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 231 1.3E-19 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 SUPERFAMILY SSF81301 6 141 1.53E-40 T 14-10-2018 JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 Pfam PF01743 Poly A polymerase head domain 23 143 6.3E-38 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 SUPERFAMILY SSF81891 142 442 1.96E-58 T 14-10-2018 JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 TIGRFAM TIGR00277 HDIG: HDIG domain 242 311 3.5E-8 T 14-10-2018 IPR006675 HDIG domain JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 296 439 1.9E-16 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal JO40_00590 cb97481215cc9b9bbd61e9b24f1180ad 448 Gene3D G3DSA:1.10.3090.10 144 436 3.4E-59 T 14-10-2018 JO40_05925 4d84efda996e614f9ce4bff5bb081bdf 192 SUPERFAMILY SSF48452 51 184 5.69E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_05925 4d84efda996e614f9ce4bff5bb081bdf 192 SMART SM00028 104 137 0.45 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_05925 4d84efda996e614f9ce4bff5bb081bdf 192 SMART SM00028 138 171 93.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_05925 4d84efda996e614f9ce4bff5bb081bdf 192 Pfam PF13181 Tetratricopeptide repeat 108 136 7.4E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_05925 4d84efda996e614f9ce4bff5bb081bdf 192 Gene3D G3DSA:1.25.40.10 29 191 5.5E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_09120 f3f0eb6c277d1e57280140ff044d2a47 380 Gene3D G3DSA:3.40.50.2000 193 361 1.7E-30 T 14-10-2018 JO40_09120 f3f0eb6c277d1e57280140ff044d2a47 380 SUPERFAMILY SSF53756 96 376 5.89E-25 T 14-10-2018 JO40_09120 f3f0eb6c277d1e57280140ff044d2a47 380 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 213 364 2.8E-12 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 JO40_09120 f3f0eb6c277d1e57280140ff044d2a47 380 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 16 179 1.5E-9 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 JO40_01640 148ae7131936c312546ddf09871b9bed 264 Gene3D G3DSA:3.40.50.300 218 258 2.7E-17 T 14-10-2018 JO40_01640 148ae7131936c312546ddf09871b9bed 264 Gene3D G3DSA:1.20.1560.10 19 217 2.7E-17 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_01640 148ae7131936c312546ddf09871b9bed 264 SUPERFAMILY SSF52540 210 258 3.9E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01640 148ae7131936c312546ddf09871b9bed 264 SUPERFAMILY SSF90123 16 193 5.23E-10 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03735 9753a39787ebba196f464ec6d66a5211 236 Pfam PF02361 Cobalt transport protein 3 202 5.1E-14 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO40_00340 e552d2413d453fd6f7950f735f493d8f 449 Pfam PF01554 MatE 23 183 3.1E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_00340 e552d2413d453fd6f7950f735f493d8f 449 Pfam PF01554 MatE 245 404 7.1E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_00340 e552d2413d453fd6f7950f735f493d8f 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 410 2.3E-55 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_00340 e552d2413d453fd6f7950f735f493d8f 449 PIRSF PIRSF006603 1 448 1.6E-97 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_04055 a38c3c0cd11e8629530743f07af9a939 95 Pfam PF13146 TRL-like protein family 22 95 1.4E-8 T 14-10-2018 IPR025113 TRL-like protein family JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 SMART SM00382 26 231 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 SMART SM00382 350 517 0.45 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 Pfam PF12848 ABC transporter 224 309 9.1E-18 T 14-10-2018 IPR032781 ABC-transporter extension domain JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 Pfam PF00005 ABC transporter 341 472 1.4E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 Gene3D G3DSA:3.40.50.300 2 279 9.2E-62 T 14-10-2018 JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 SUPERFAMILY SSF52540 2 238 4.78E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 Gene3D G3DSA:3.40.50.300 283 549 6.3E-41 T 14-10-2018 JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 SUPERFAMILY SSF52540 296 522 1.11E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11350 e7b8da9e065657fc8aa8d4684d0e0fca 550 Pfam PF00005 ABC transporter 18 184 6.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06845 6ce673c87fe383b663f741f172a02442 258 Pfam PF02616 Segregation and condensation protein ScpA 36 247 2.5E-25 T 14-10-2018 IPR003768 Segregation and condensation protein A JO40_06845 6ce673c87fe383b663f741f172a02442 258 Hamap MF_01805 Segregation and condensation protein A [scpA]. 19 251 20.35 T 14-10-2018 IPR003768 Segregation and condensation protein A JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 Gene3D G3DSA:3.40.710.10 239 600 6.2E-96 T 14-10-2018 JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 Gene3D G3DSA:3.90.1310.10 55 237 3.3E-41 T 14-10-2018 JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 570 2.0E-65 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 Pfam PF03717 Penicillin-binding Protein dimerisation domain 55 227 3.3E-45 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 Gene3D G3DSA:3.30.1390.30 77 153 3.3E-41 T 14-10-2018 JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 SUPERFAMILY SSF56601 244 584 6.76E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 11 592 3.9E-189 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JO40_12265 de0e03862bf768fcd218d2a7ffd58c14 617 SUPERFAMILY SSF56519 51 243 4.84E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JO40_09070 08ffc58110c172693b441278d9a8a788 314 Pfam PF01882 Protein of unknown function DUF58 37 111 1.9E-19 T 14-10-2018 IPR002881 Domain of unknown function DUF58 JO40_09070 08ffc58110c172693b441278d9a8a788 314 SUPERFAMILY SSF53300 73 213 6.67E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 Pfam PF00347 Ribosomal protein L6 92 164 1.9E-15 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 Pfam PF00347 Ribosomal protein L6 11 83 3.8E-15 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 Gene3D G3DSA:3.90.930.12 1 83 1.2E-28 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 SUPERFAMILY SSF56053 84 176 6.41E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 PIRSF PIRSF002162 1 177 2.0E-48 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 SUPERFAMILY SSF56053 1 83 4.45E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 Gene3D G3DSA:3.90.930.12 84 179 1.2E-33 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 9.8E-68 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 3.8E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 3.8E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.8E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO40_02235 ef890a449f00a3e1dbfb7b587d96dce4 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 34.947 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 Gene3D G3DSA:2.40.30.10 208 301 2.8E-38 T 14-10-2018 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 57.653 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 8.9E-30 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 8.5E-209 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 Gene3D G3DSA:3.40.50.300 1 204 2.7E-65 T 14-10-2018 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 Pfam PF00009 Elongation factor Tu GTP binding domain 11 202 2.1E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 SUPERFAMILY SSF52540 9 227 8.79E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 SUPERFAMILY SSF50447 206 302 4.37E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 2.1E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 Pfam PF03144 Elongation factor Tu domain 2 226 294 1.2E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 Gene3D G3DSA:2.40.30.10 302 394 7.9E-38 T 14-10-2018 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO40_02315 c0e2acb6917e5815bf1a274fad23ed6b 395 SUPERFAMILY SSF50465 299 394 7.19E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JO40_00715 29e7b5bec4caf706a0b0bf35e13b8e48 404 Gene3D G3DSA:3.40.50.2300 1 119 1.5E-8 T 14-10-2018 JO40_00715 29e7b5bec4caf706a0b0bf35e13b8e48 404 Gene3D G3DSA:3.40.50.2300 276 403 6.6E-31 T 14-10-2018 JO40_00715 29e7b5bec4caf706a0b0bf35e13b8e48 404 SUPERFAMILY SSF52172 2 127 2.13E-10 T 14-10-2018 IPR011006 CheY-like superfamily JO40_00715 29e7b5bec4caf706a0b0bf35e13b8e48 404 SUPERFAMILY SSF52172 284 401 4.7E-31 T 14-10-2018 IPR011006 CheY-like superfamily JO40_00715 29e7b5bec4caf706a0b0bf35e13b8e48 404 Pfam PF00072 Response regulator receiver domain 287 395 7.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_00715 29e7b5bec4caf706a0b0bf35e13b8e48 404 SMART SM00448 285 396 7.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 SUPERFAMILY SSF81665 69 636 1.57E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 557 4.0E-22 T 14-10-2018 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 4.0E-22 T 14-10-2018 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 479 489 4.0E-22 T 14-10-2018 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 4.0E-22 T 14-10-2018 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 574 4.0E-22 T 14-10-2018 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 Gene3D G3DSA:3.40.50.1000 311 590 5.5E-73 T 14-10-2018 IPR023214 HAD superfamily JO40_09560 d033612125d2e81bb547c187669c7d0e 643 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 640 9.5E-161 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00941 Cadmium-transporting ATPase signature 103 123 2.2E-5 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00941 Cadmium-transporting ATPase signature 48 60 2.2E-5 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00941 Cadmium-transporting ATPase signature 185 201 2.2E-5 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 PRINTS PR00941 Cadmium-transporting ATPase signature 204 218 2.2E-5 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 Pfam PF00702 haloacid dehalogenase-like hydrolase 327 552 1.4E-28 T 14-10-2018 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 SUPERFAMILY SSF81653 127 219 1.96E-18 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 Gene3D G3DSA:3.40.1110.10 341 463 5.5E-73 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 367 4.5E-32 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 405 622 2.5E-31 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 Gene3D G3DSA:2.70.150.20 112 224 6.5E-28 T 14-10-2018 JO40_09560 d033612125d2e81bb547c187669c7d0e 643 SUPERFAMILY SSF56784 329 639 3.57E-52 T 14-10-2018 IPR036412 HAD-like superfamily JO40_09560 d033612125d2e81bb547c187669c7d0e 643 Pfam PF00122 E1-E2 ATPase 119 310 1.1E-40 T 14-10-2018 JO40_08420 8d84a46daba7c5010aa32664af95625c 288 Pfam PF03755 YicC-like family, N-terminal region 1 153 2.0E-31 T 14-10-2018 IPR013527 YicC-like, N-terminal JO40_08420 8d84a46daba7c5010aa32664af95625c 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 5.0E-63 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 JO40_08420 8d84a46daba7c5010aa32664af95625c 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 2.7E-30 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 JO40_13305 fbc318b4f392143f8de96ea8350cba34 567 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 566 7.5E-102 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO40_13305 fbc318b4f392143f8de96ea8350cba34 567 Pfam PF01514 Secretory protein of YscJ/FliF family 31 224 8.2E-36 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF JO40_13305 fbc318b4f392143f8de96ea8350cba34 567 PRINTS PR01009 Flagellar M-ring protein signature 155 169 2.0E-8 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO40_13305 fbc318b4f392143f8de96ea8350cba34 567 PRINTS PR01009 Flagellar M-ring protein signature 274 292 2.0E-8 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO40_13305 fbc318b4f392143f8de96ea8350cba34 567 PRINTS PR01009 Flagellar M-ring protein signature 200 218 2.0E-8 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO40_13305 fbc318b4f392143f8de96ea8350cba34 567 PRINTS PR01009 Flagellar M-ring protein signature 123 141 2.0E-8 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO40_13305 fbc318b4f392143f8de96ea8350cba34 567 Pfam PF08345 Flagellar M-ring protein C-terminal 260 448 3.0E-21 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal JO40_10400 d7690aed44e4bd512ce578e6f89b7c32 463 Pfam PF05525 Branched-chain amino acid transport protein 5 436 2.8E-119 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 JO40_10400 d7690aed44e4bd512ce578e6f89b7c32 463 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 12 398 8.1E-109 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 3 193 1.3E-97 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 Pfam PF00574 Clp protease 14 193 4.9E-82 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 Gene3D G3DSA:3.90.226.10 1 196 8.3E-84 T 14-10-2018 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 14-10-2018 IPR033135 ClpP, histidine active site JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 194 41.923 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 SUPERFAMILY SSF52096 12 194 1.26E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 2.4E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 2.4E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 2.4E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 2.4E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_10820 1f14b5ccb7e6f9a83f5455db4fdca18f 197 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 2.4E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_02535 4b19cc2e99653602b73a65c8b6ff18ac 426 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 36.816 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_02535 4b19cc2e99653602b73a65c8b6ff18ac 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 7.0E-68 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JO40_02535 4b19cc2e99653602b73a65c8b6ff18ac 426 Gene3D G3DSA:3.65.10.10 21 228 1.4E-151 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO40_02535 4b19cc2e99653602b73a65c8b6ff18ac 426 SUPERFAMILY SSF55205 1 423 6.67E-110 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JO40_02535 4b19cc2e99653602b73a65c8b6ff18ac 426 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 5.4E-155 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_02535 4b19cc2e99653602b73a65c8b6ff18ac 426 Gene3D G3DSA:3.65.10.10 6 421 1.4E-151 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO40_01885 485b4b71d4047c64ebddb9ed9136d860 218 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 29 209 1.6E-34 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JO40_01885 485b4b71d4047c64ebddb9ed9136d860 218 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 26 209 2.2E-31 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JO40_01885 485b4b71d4047c64ebddb9ed9136d860 218 SUPERFAMILY SSF100950 5 215 1.09E-38 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO40_01885 485b4b71d4047c64ebddb9ed9136d860 218 PIRSF PIRSF006806 2 212 1.8E-34 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JO40_01885 485b4b71d4047c64ebddb9ed9136d860 218 Gene3D G3DSA:3.40.50.10420 1 217 8.0E-43 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily JO40_05030 72741a5a0f45514d0d0a9e11629dfb4c 490 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 373 452 5.4E-10 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JO40_05030 72741a5a0f45514d0d0a9e11629dfb4c 490 Pfam PF13394 4Fe-4S single cluster domain 148 224 6.0E-6 T 14-10-2018 JO40_05030 72741a5a0f45514d0d0a9e11629dfb4c 490 Pfam PF13186 Iron-sulfur cluster-binding domain 373 434 2.0E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JO40_05030 72741a5a0f45514d0d0a9e11629dfb4c 490 Gene3D G3DSA:3.20.20.70 135 428 2.1E-47 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_05030 72741a5a0f45514d0d0a9e11629dfb4c 490 SUPERFAMILY SSF102114 139 441 2.75E-56 T 14-10-2018 JO40_05030 72741a5a0f45514d0d0a9e11629dfb4c 490 Pfam PF04055 Radical SAM superfamily 146 300 7.4E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_05030 72741a5a0f45514d0d0a9e11629dfb4c 490 SMART SM00729 141 343 6.9E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_00730 1866ad747393326d733fdb976dd0d04a 406 Gene3D G3DSA:1.20.5.340 313 403 2.7E-5 T 14-10-2018 JO40_07055 e6cc21831bedcbe7c3901fdb81ccdf1f 271 SUPERFAMILY SSF140931 72 265 1.44E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_07055 e6cc21831bedcbe7c3901fdb81ccdf1f 271 Gene3D G3DSA:1.10.3290.10 7 268 8.0E-50 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_07055 e6cc21831bedcbe7c3901fdb81ccdf1f 271 Pfam PF02661 Fic/DOC family 95 208 8.4E-20 T 14-10-2018 IPR003812 Fido domain JO40_08930 871cc9c1f06556608d2ffb516460ec54 406 Pfam PF04165 Protein of unknown function (DUF401) 11 381 6.4E-26 T 14-10-2018 IPR007294 Protein of unknown function DUF401 JO40_12795 acf90d2858b582484858a74ca8e61450 384 Pfam PF00534 Glycosyl transferases group 1 196 359 1.4E-38 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO40_12795 acf90d2858b582484858a74ca8e61450 384 Gene3D G3DSA:3.40.50.2000 1 201 8.3E-40 T 14-10-2018 JO40_12795 acf90d2858b582484858a74ca8e61450 384 SUPERFAMILY SSF53756 2 383 4.08E-89 T 14-10-2018 JO40_12795 acf90d2858b582484858a74ca8e61450 384 Pfam PF13439 Glycosyltransferase Family 4 14 184 1.8E-32 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JO40_12795 acf90d2858b582484858a74ca8e61450 384 Gene3D G3DSA:3.40.50.2000 202 370 4.5E-43 T 14-10-2018 JO40_07925 0a6be0cd862757fc8bb67dfd43595ddf 303 SUPERFAMILY SSF52151 3 271 4.71E-47 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JO40_07925 0a6be0cd862757fc8bb67dfd43595ddf 303 Gene3D G3DSA:3.40.1090.20 144 198 4.9E-6 T 14-10-2018 JO40_07925 0a6be0cd862757fc8bb67dfd43595ddf 303 Pfam PF01734 Patatin-like phospholipase 5 186 8.9E-23 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JO40_07925 0a6be0cd862757fc8bb67dfd43595ddf 303 Gene3D G3DSA:3.40.1090.10 2 116 2.5E-23 T 14-10-2018 JO40_12790 d58ed9cc9dbe8f48e395f384f24c36b9 330 SUPERFAMILY SSF69917 26 316 1.02E-17 T 14-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 JO40_12790 d58ed9cc9dbe8f48e395f384f24c36b9 330 Gene3D G3DSA:2.40.128.90 18 327 1.8E-28 T 14-10-2018 JO40_12790 d58ed9cc9dbe8f48e395f384f24c36b9 330 Pfam PF01278 Omptin family 28 326 9.7E-18 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JO40_03880 0f591e78905a4b7456a595bc914f07ca 566 Pfam PF02707 Major Outer Sheath Protein N-terminal region 95 250 3.2E-16 T 14-10-2018 IPR003857 Major outer sheath protein, N-terminal JO40_03880 0f591e78905a4b7456a595bc914f07ca 566 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 318 534 2.2E-16 T 14-10-2018 IPR003872 Major outer sheath protein, C-terminal JO40_11535 50462e04f50d32ad086c8f277657c80b 322 SUPERFAMILY SSF50486 210 317 4.71E-28 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 JO40_11535 50462e04f50d32ad086c8f277657c80b 322 Gene3D G3DSA:3.10.25.10 212 321 7.4E-34 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO40_11535 50462e04f50d32ad086c8f277657c80b 322 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 313 2.0E-78 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JO40_11535 50462e04f50d32ad086c8f277657c80b 322 SUPERFAMILY SSF53328 1 212 4.97E-45 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO40_11535 50462e04f50d32ad086c8f277657c80b 322 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 315 28.002 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JO40_11535 50462e04f50d32ad086c8f277657c80b 322 Pfam PF00551 Formyl transferase 23 170 1.1E-29 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO40_11535 50462e04f50d32ad086c8f277657c80b 322 Gene3D G3DSA:3.40.50.170 1 211 5.1E-57 T 14-10-2018 JO40_11535 50462e04f50d32ad086c8f277657c80b 322 Pfam PF02911 Formyl transferase, C-terminal domain 210 312 5.7E-29 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO40_04045 7706e8384f739288f7b24ca46571bd6f 625 Pfam PF07695 7TM diverse intracellular signalling 194 389 1.7E-22 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO40_04045 7706e8384f739288f7b24ca46571bd6f 625 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 442 616 2.9E-15 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_04045 7706e8384f739288f7b24ca46571bd6f 625 SUPERFAMILY SSF55073 436 621 8.63E-34 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_04045 7706e8384f739288f7b24ca46571bd6f 625 Gene3D G3DSA:3.30.70.1230 434 625 3.4E-29 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_03290 23b604f7551e316b78d4d5e3fc92e51c 335 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 329 2.2E-121 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JO40_03290 23b604f7551e316b78d4d5e3fc92e51c 335 Gene3D G3DSA:3.40.50.10750 143 305 5.7E-125 T 14-10-2018 JO40_03290 23b604f7551e316b78d4d5e3fc92e51c 335 SUPERFAMILY SSF53659 1 332 1.6E-87 T 14-10-2018 JO40_03290 23b604f7551e316b78d4d5e3fc92e51c 335 PIRSF PIRSF000428 1 335 8.7E-111 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JO40_03290 23b604f7551e316b78d4d5e3fc92e51c 335 Gene3D G3DSA:3.40.50.10950 9 332 5.7E-125 T 14-10-2018 JO40_03290 23b604f7551e316b78d4d5e3fc92e51c 335 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 328 3.4E-114 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JO40_03430 8e8c765b1ac8fddc72ba1ee65507ac7d 487 Gene3D G3DSA:3.30.830.10 273 454 5.6E-18 T 14-10-2018 JO40_03430 8e8c765b1ac8fddc72ba1ee65507ac7d 487 SUPERFAMILY SSF63411 343 467 1.92E-13 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_03430 8e8c765b1ac8fddc72ba1ee65507ac7d 487 Gene3D G3DSA:3.30.830.10 28 247 1.5E-53 T 14-10-2018 JO40_03430 8e8c765b1ac8fddc72ba1ee65507ac7d 487 Pfam PF00675 Insulinase (Peptidase family M16) 48 183 8.6E-20 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JO40_03430 8e8c765b1ac8fddc72ba1ee65507ac7d 487 Pfam PF05193 Peptidase M16 inactive domain 197 252 3.8E-8 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JO40_03430 8e8c765b1ac8fddc72ba1ee65507ac7d 487 SUPERFAMILY SSF63411 27 249 2.02E-48 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO40_05600 05a33e0a1b24b528a9770c43a23e4a46 204 Gene3D G3DSA:1.10.150.520 19 76 1.5E-36 T 14-10-2018 JO40_05600 05a33e0a1b24b528a9770c43a23e4a46 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 174 1.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_05600 05a33e0a1b24b528a9770c43a23e4a46 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 174 1.5E-23 T 14-10-2018 JO40_05600 05a33e0a1b24b528a9770c43a23e4a46 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 73 168 5.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_05600 05a33e0a1b24b528a9770c43a23e4a46 204 Gene3D G3DSA:3.40.50.1000 8 200 1.5E-36 T 14-10-2018 IPR023214 HAD superfamily JO40_05600 05a33e0a1b24b528a9770c43a23e4a46 204 SUPERFAMILY SSF56784 4 202 1.11E-32 T 14-10-2018 IPR036412 HAD-like superfamily JO40_11910 8d700d5b1583e54550958be97ade688a 378 Gene3D G3DSA:3.40.630.30 202 374 4.0E-7 T 14-10-2018 JO40_11910 8d700d5b1583e54550958be97ade688a 378 SUPERFAMILY SSF55729 15 365 5.4E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_06485 bf37f163990a280b582c7ce4267421d4 191 Gene3D G3DSA:1.20.1260.10 1 146 5.2E-57 T 14-10-2018 IPR012347 Ferritin-like JO40_06485 bf37f163990a280b582c7ce4267421d4 191 SUPERFAMILY SSF57802 151 189 1.46E-10 T 14-10-2018 JO40_06485 bf37f163990a280b582c7ce4267421d4 191 Gene3D G3DSA:2.20.28.10 147 191 6.0E-16 T 14-10-2018 JO40_06485 bf37f163990a280b582c7ce4267421d4 191 Pfam PF02915 Rubrerythrin 12 138 4.7E-28 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 JO40_06485 bf37f163990a280b582c7ce4267421d4 191 SUPERFAMILY SSF47240 4 146 4.29E-40 T 14-10-2018 IPR009078 Ferritin-like superfamily JO40_13200 28bee1dc6032daca686388a972d28c98 329 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 1 318 2.7E-67 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 JO40_13200 28bee1dc6032daca686388a972d28c98 329 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 329 85.364 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 JO40_13200 28bee1dc6032daca686388a972d28c98 329 Pfam PF03186 CobD/Cbib protein 2 310 4.9E-97 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 JO40_08815 159cbc353d425a108101a7d891714306 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.6E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO40_08815 159cbc353d425a108101a7d891714306 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.6E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO40_08815 159cbc353d425a108101a7d891714306 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.6E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO40_08815 159cbc353d425a108101a7d891714306 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.633 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO40_08815 159cbc353d425a108101a7d891714306 66 SUPERFAMILY SSF143034 2 62 1.57E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08815 159cbc353d425a108101a7d891714306 66 Gene3D G3DSA:2.40.50.530 1 65 1.8E-21 T 14-10-2018 JO40_08815 159cbc353d425a108101a7d891714306 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_08815 159cbc353d425a108101a7d891714306 66 Pfam PF01632 Ribosomal protein L35 2 61 6.1E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_08815 159cbc353d425a108101a7d891714306 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 65 2.5E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO40_10650 913ecdec5563825ce5fb5278218cbacc 348 Pfam PF04620 Flagellar filament outer layer protein Flaa 43 291 1.1E-92 T 14-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 JO40_10650 913ecdec5563825ce5fb5278218cbacc 348 PIRSF PIRSF002892 1 348 4.8E-161 T 14-10-2018 IPR016369 Flagellar filament outer layer protein FlaA, Spirochaetes JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 SUPERFAMILY SSF46548 332 444 3.14E-15 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 480 126.919 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 Gene3D G3DSA:3.40.50.11540 132 290 5.4E-18 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 Gene3D G3DSA:3.30.70.20 347 453 1.1E-6 T 14-10-2018 JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 SUPERFAMILY SSF51230 20 107 9.55E-5 T 14-10-2018 IPR011053 Single hybrid motif JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 413 424 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 SUPERFAMILY SSF142019 96 301 1.83E-54 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 5 443 3.3E-132 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 104 7.2E-30 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain JO40_01960 61be65bacc5126be9104a5a15b11b05f 480 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 127 281 1.7E-49 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_00320 0a6fb978a1696f44ee9629e823747444 604 SMART SM00382 382 571 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00320 0a6fb978a1696f44ee9629e823747444 604 Gene3D G3DSA:1.20.1560.10 3 339 2.5E-15 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00320 0a6fb978a1696f44ee9629e823747444 604 Gene3D G3DSA:3.40.50.300 348 603 1.4E-70 T 14-10-2018 JO40_00320 0a6fb978a1696f44ee9629e823747444 604 SUPERFAMILY SSF90123 23 330 7.85E-21 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00320 0a6fb978a1696f44ee9629e823747444 604 SUPERFAMILY SSF52540 349 596 9.26E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00320 0a6fb978a1696f44ee9629e823747444 604 Pfam PF00005 ABC transporter 373 526 4.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06110 531353d480abdc6ba06da32a76ae5ce7 150 Pfam PF12821 Threonine/Serine exporter, ThrE 7 132 2.9E-37 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE JO40_12150 73410996518f99f3f01df290ff0a0c98 482 SUPERFAMILY SSF55073 325 466 4.47E-11 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_12150 73410996518f99f3f01df290ff0a0c98 482 Gene3D G3DSA:3.30.70.270 318 470 7.2E-11 T 14-10-2018 JO40_12150 73410996518f99f3f01df290ff0a0c98 482 SMART SM00267 314 468 9.9E-5 T 14-10-2018 IPR000160 GGDEF domain JO40_12150 73410996518f99f3f01df290ff0a0c98 482 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 461 1.6E-7 T 14-10-2018 IPR000160 GGDEF domain JO40_07390 005a22d192750527da7fb57214b342e0 310 Pfam PF00005 ABC transporter 18 161 2.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_07390 005a22d192750527da7fb57214b342e0 310 Gene3D G3DSA:3.40.50.300 1 241 2.1E-66 T 14-10-2018 JO40_07390 005a22d192750527da7fb57214b342e0 310 SMART SM00382 27 218 5.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07390 005a22d192750527da7fb57214b342e0 310 SUPERFAMILY SSF52540 2 222 5.33E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07390 005a22d192750527da7fb57214b342e0 310 Pfam PF13732 Domain of unknown function (DUF4162) 215 304 4.2E-10 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 JO40_08170 d28249719568f07d6759534d90426c63 240 Pfam PF00188 Cysteine-rich secretory protein family 66 233 1.9E-8 T 14-10-2018 IPR014044 CAP domain JO40_08170 d28249719568f07d6759534d90426c63 240 SUPERFAMILY SSF55797 58 233 1.41E-8 T 14-10-2018 IPR035940 CAP superfamily JO40_04275 c40a00fcec4a26f68b068fd5e465efd8 233 Pfam PF01048 Phosphorylase superfamily 16 232 3.5E-36 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JO40_04275 c40a00fcec4a26f68b068fd5e465efd8 233 Gene3D G3DSA:3.40.50.1580 2 233 9.1E-71 T 14-10-2018 JO40_04275 c40a00fcec4a26f68b068fd5e465efd8 233 SUPERFAMILY SSF53167 2 232 9.3E-88 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JO40_04275 c40a00fcec4a26f68b068fd5e465efd8 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 1.3E-91 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JO40_04275 c40a00fcec4a26f68b068fd5e465efd8 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 43.579 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JO40_04275 c40a00fcec4a26f68b068fd5e465efd8 233 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO40_04855 5947e5564eef53a2fc692108b443703e 493 Pfam PF07556 Protein of unknown function (DUF1538) 18 228 2.0E-59 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 JO40_04855 5947e5564eef53a2fc692108b443703e 493 Pfam PF07556 Protein of unknown function (DUF1538) 273 483 1.6E-58 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 Pfam PF00005 ABC transporter 358 506 3.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 11 537 2.8E-99 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 SUPERFAMILY SSF90123 11 329 4.05E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 Pfam PF00664 ABC transporter transmembrane region 24 291 2.2E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 Gene3D G3DSA:1.20.1560.10 9 321 6.2E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 Gene3D G3DSA:3.40.50.300 333 555 2.5E-86 T 14-10-2018 JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 SMART SM00382 367 553 2.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00985 e1ca9d0cffdc736e33713aab4596ed4b 555 SUPERFAMILY SSF52540 336 555 4.08E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 39.608 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 Gene3D G3DSA:3.30.70.1660 110 340 1.8E-99 T 14-10-2018 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 353 4.1E-158 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 Pfam PF00472 RF-1 domain 210 319 2.3E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 Gene3D G3DSA:3.30.160.20 209 295 1.8E-99 T 14-10-2018 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 Pfam PF03462 PCRF domain 9 202 1.9E-70 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 SMART SM00937 62 177 6.2E-58 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 SUPERFAMILY SSF75620 8 351 3.27E-135 T 14-10-2018 JO40_01450 eca36cd21c753ec485ac15f514a8a43b 361 Gene3D G3DSA:1.20.58.410 4 100 2.9E-7 T 14-10-2018 JO40_01610 15362580da2118d351a32533ac738470 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 383 4.0E-132 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 JO40_01610 15362580da2118d351a32533ac738470 395 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 395 1.9E-180 T 14-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type JO40_01610 15362580da2118d351a32533ac738470 395 Gene3D G3DSA:3.90.1150.10 38 386 1.1E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_01610 15362580da2118d351a32533ac738470 395 Pfam PF00155 Aminotransferase class I and II 42 383 2.5E-64 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO40_01610 15362580da2118d351a32533ac738470 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JO40_01610 15362580da2118d351a32533ac738470 395 Gene3D G3DSA:3.40.640.10 58 293 1.1E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_01610 15362580da2118d351a32533ac738470 395 SUPERFAMILY SSF53383 6 393 5.3E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_02030 68177992fc4b7c254a58d1719deabfb7 222 Hamap MF_01114 Regulatory protein RecX [recX]. 57 219 12.522 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JO40_02030 68177992fc4b7c254a58d1719deabfb7 222 Gene3D G3DSA:1.10.10.10 77 121 7.5E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_02030 68177992fc4b7c254a58d1719deabfb7 222 Gene3D G3DSA:1.10.10.10 123 167 1.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_02030 68177992fc4b7c254a58d1719deabfb7 222 Pfam PF02631 RecX family 99 213 1.8E-21 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JO40_09785 fd90ba61a7aa57f8beb136b17f3542f1 339 SUPERFAMILY SSF53448 2 217 4.13E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09785 fd90ba61a7aa57f8beb136b17f3542f1 339 Gene3D G3DSA:3.90.550.10 1 237 1.1E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09785 fd90ba61a7aa57f8beb136b17f3542f1 339 Pfam PF00535 Glycosyl transferase family 2 5 121 8.8E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO40_06070 fa9c25043831c1f84a5661311304c730 482 SUPERFAMILY SSF56436 221 480 1.25E-47 T 14-10-2018 IPR016187 C-type lectin fold JO40_06070 fa9c25043831c1f84a5661311304c730 482 Pfam PF03781 Sulfatase-modifying factor enzyme 1 220 479 1.1E-39 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO40_06070 fa9c25043831c1f84a5661311304c730 482 Gene3D G3DSA:3.90.1580.10 198 482 1.6E-106 T 14-10-2018 JO40_01620 c003fd44a0b552522ecf288b39f8f328 225 SUPERFAMILY SSF90123 20 192 1.57E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_01620 c003fd44a0b552522ecf288b39f8f328 225 Gene3D G3DSA:1.20.1560.10 10 202 3.2E-5 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 59 4.5E-20 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 Pfam PF01165 Ribosomal protein S21 4 56 1.4E-18 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 18.446 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 Gene3D G3DSA:1.20.5.1150 16 63 2.1E-12 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01470 b019eaae9cb2f9c0ea3da48b63ff3bee 69 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 55 4.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02090 f15ef31573e9bc4aed790ae6f2e0e3d7 290 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 77 229 2.5E-18 T 14-10-2018 JO40_02090 f15ef31573e9bc4aed790ae6f2e0e3d7 290 Gene3D G3DSA:3.40.830.10 73 278 1.6E-8 T 14-10-2018 JO40_02090 f15ef31573e9bc4aed790ae6f2e0e3d7 290 Pfam PF01875 Memo-like protein 78 220 4.9E-11 T 14-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 SUPERFAMILY SSF52540 164 385 1.39E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 SUPERFAMILY SSF52540 324 577 2.08E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 Gene3D G3DSA:3.90.1570.30 7 153 5.6E-13 T 14-10-2018 JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 Pfam PF08463 EcoEI R protein C-terminal 751 928 1.7E-29 T 14-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 SMART SM00487 169 388 7.5E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 Gene3D G3DSA:3.40.50.300 375 616 8.6E-44 T 14-10-2018 JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 Gene3D G3DSA:3.40.50.300 157 370 2.4E-41 T 14-10-2018 JO40_07045 baa854508424dcbb045bef0758d3fd0d 934 Pfam PF04851 Type III restriction enzyme, res subunit 172 359 5.2E-36 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO40_11440 ec03ba9e20eaf2f18c087c92168473d8 434 Gene3D G3DSA:3.90.1150.10 68 428 1.9E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_11440 ec03ba9e20eaf2f18c087c92168473d8 434 Gene3D G3DSA:3.40.640.10 78 342 1.9E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_11440 ec03ba9e20eaf2f18c087c92168473d8 434 Pfam PF02347 Glycine cleavage system P-protein 3 428 1.7E-119 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JO40_11440 ec03ba9e20eaf2f18c087c92168473d8 434 SUPERFAMILY SSF53383 4 434 1.21E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_11440 ec03ba9e20eaf2f18c087c92168473d8 434 PIRSF PIRSF006815 2 434 8.1E-151 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 JO40_00790 94c591cfe36eb41ae8c7239f4e83a08d 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 2.8E-16 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_00790 94c591cfe36eb41ae8c7239f4e83a08d 59 Gene3D G3DSA:1.20.5.1030 1 58 3.1E-17 T 14-10-2018 IPR038379 SecE superfamily JO40_00790 94c591cfe36eb41ae8c7239f4e83a08d 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.56 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_00790 94c591cfe36eb41ae8c7239f4e83a08d 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO40_00790 94c591cfe36eb41ae8c7239f4e83a08d 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 59 4.0E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JO40_01385 df7676536f3c7937c5ac1b2aef98f67c 346 Pfam PF01569 PAP2 superfamily 66 197 3.5E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JO40_01385 df7676536f3c7937c5ac1b2aef98f67c 346 SUPERFAMILY SSF48317 13 197 1.57E-31 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JO40_01385 df7676536f3c7937c5ac1b2aef98f67c 346 Gene3D G3DSA:1.20.144.10 97 229 5.6E-21 T 14-10-2018 JO40_01385 df7676536f3c7937c5ac1b2aef98f67c 346 SMART SM00014 64 194 8.2E-37 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 SUPERFAMILY SSF101790 272 353 3.92E-20 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 Gene3D G3DSA:3.30.1360.120 3 233 1.6E-87 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 Gene3D G3DSA:3.30.70.1400 50 135 1.6E-87 T 14-10-2018 JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 353 2.3E-105 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 SUPERFAMILY SSF103025 1 272 2.13E-96 T 14-10-2018 JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 348 5.4E-14 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 Gene3D G3DSA:2.40.30.110 277 348 1.5E-18 T 14-10-2018 JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 4.4E-91 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 PIRSF PIRSF006487 1 357 5.9E-99 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JO40_11450 300764980f1e6ab2954e7292c87daa5b 358 Gene3D G3DSA:4.10.1250.10 235 275 4.4E-12 T 14-10-2018 JO40_11010 b4b0125bcc6d093a7308dcf6385fde39 96 SUPERFAMILY SSF69754 1 95 8.89E-15 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JO40_11010 b4b0125bcc6d093a7308dcf6385fde39 96 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 5.6E-11 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JO40_11010 b4b0125bcc6d093a7308dcf6385fde39 96 Gene3D G3DSA:3.30.160.100 1 95 1.2E-9 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JO40_01715 21b31ea468327fd8a27eabab2155a4a4 421 Pfam PF11871 Domain of unknown function (DUF3391) 2 155 2.5E-12 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 JO40_01715 21b31ea468327fd8a27eabab2155a4a4 421 SMART SM00471 183 319 0.0011 T 14-10-2018 IPR003607 HD/PDEase domain JO40_01715 21b31ea468327fd8a27eabab2155a4a4 421 Pfam PF13487 HD domain 238 301 4.2E-16 T 14-10-2018 JO40_01715 21b31ea468327fd8a27eabab2155a4a4 421 SUPERFAMILY SSF109604 188 348 5.14E-26 T 14-10-2018 JO40_12165 a81f3e800104d18239868fdb558a7b6e 454 Pfam PF13347 MFS/sugar transport protein 8 434 3.9E-86 T 14-10-2018 JO40_12165 a81f3e800104d18239868fdb558a7b6e 454 SUPERFAMILY SSF103473 5 436 1.01E-25 T 14-10-2018 IPR036259 MFS transporter superfamily JO40_12165 a81f3e800104d18239868fdb558a7b6e 454 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 7 447 1.6E-117 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 JO40_12165 a81f3e800104d18239868fdb558a7b6e 454 Gene3D G3DSA:1.20.1250.20 2 430 2.5E-16 T 14-10-2018 JO40_12100 90011622ebb9914d446b992b53ebe0e2 515 Pfam PF05872 Bacterial protein of unknown function (DUF853) 11 510 6.3E-208 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal JO40_12100 90011622ebb9914d446b992b53ebe0e2 515 Gene3D G3DSA:3.40.50.300 2 108 1.2E-8 T 14-10-2018 JO40_12100 90011622ebb9914d446b992b53ebe0e2 515 SUPERFAMILY SSF52540 4 365 5.99E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12100 90011622ebb9914d446b992b53ebe0e2 515 Gene3D G3DSA:3.40.50.300 189 368 4.9E-23 T 14-10-2018 JO40_05450 a7ddb938c59cf7a793d17d3589495df9 396 TIGRFAM TIGR00261 traB: TraB family protein 15 392 1.5E-109 T 14-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal JO40_05450 a7ddb938c59cf7a793d17d3589495df9 396 Pfam PF01963 TraB family 15 234 2.9E-38 T 14-10-2018 IPR002816 Pheromone shutdown, TraB JO40_06320 7848ef4094aaadf04aef0e5c65072a7f 170 Pfam PF02643 Uncharacterized ACR, COG1430 56 158 6.4E-29 T 14-10-2018 IPR003795 Protein of unknown function DUF192 JO40_06320 7848ef4094aaadf04aef0e5c65072a7f 170 Gene3D G3DSA:2.60.120.1140 35 167 3.2E-36 T 14-10-2018 IPR038695 Saro_0823-like superfamily JO40_00835 74afb973efd7e2f0b9a33b8a5ca34bef 233 Gene3D G3DSA:3.10.350.10 162 211 2.7E-5 T 14-10-2018 IPR036779 LysM domain superfamily JO40_07920 08ffb5107254a84caedf0adead014400 116 Pfam PF07009 NusG domain II 13 115 3.4E-12 T 14-10-2018 IPR024045 NusG, domain 2 JO40_07920 08ffb5107254a84caedf0adead014400 116 Gene3D G3DSA:2.60.320.10 31 116 5.9E-12 T 14-10-2018 IPR038690 NusG, domain 2 superfamily JO40_09815 ae8920ae97b26d9d2dc4251eddcf2f6c 307 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 236 9.2E-32 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JO40_09815 ae8920ae97b26d9d2dc4251eddcf2f6c 307 SUPERFAMILY SSF51735 11 304 4.78E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_09815 ae8920ae97b26d9d2dc4251eddcf2f6c 307 Gene3D G3DSA:3.40.50.720 11 237 1.6E-47 T 14-10-2018 JO40_09815 ae8920ae97b26d9d2dc4251eddcf2f6c 307 Gene3D G3DSA:3.90.25.10 178 303 1.6E-47 T 14-10-2018 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 Hamap MF_00109 Shikimate kinase [aroK]. 1 199 16.831 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 Gene3D G3DSA:3.40.50.300 2 200 3.2E-38 T 14-10-2018 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 Pfam PF01202 Shikimate kinase 90 198 3.4E-6 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 Pfam PF01202 Shikimate kinase 11 74 1.6E-15 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 PRINTS PR01100 Shikimate kinase family signature 3 18 2.9E-7 T 14-10-2018 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 PRINTS PR01100 Shikimate kinase family signature 27 40 2.9E-7 T 14-10-2018 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 PRINTS PR01100 Shikimate kinase family signature 55 63 2.9E-7 T 14-10-2018 JO40_08330 7ca708aa30623db101dd23a4de487e0a 200 SUPERFAMILY SSF52540 1 196 4.63E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07695 2c1d26e83346cb40ced35b5f28e3b316 119 SUPERFAMILY SSF57716 82 116 9.5E-9 T 14-10-2018 JO40_07695 2c1d26e83346cb40ced35b5f28e3b316 119 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 81 115 7.0E-13 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 JO40_07695 2c1d26e83346cb40ced35b5f28e3b316 119 Gene3D G3DSA:1.20.120.910 1 118 2.5E-28 T 14-10-2018 JO40_07695 2c1d26e83346cb40ced35b5f28e3b316 119 SUPERFAMILY SSF109635 1 79 2.09E-11 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 298 1.5E-26 T 14-10-2018 IPR000160 GGDEF domain JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 SUPERFAMILY SSF55073 166 314 1.26E-27 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 SMART SM00267 150 315 1.2E-17 T 14-10-2018 IPR000160 GGDEF domain JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 SMART SM00100 16 133 5.9E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 Gene3D G3DSA:3.30.70.270 154 302 1.8E-31 T 14-10-2018 JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 Pfam PF00027 Cyclic nucleotide-binding domain 36 111 1.8E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 SUPERFAMILY SSF51206 7 128 2.36E-23 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 163 297 1.8E-28 T 14-10-2018 IPR000160 GGDEF domain JO40_06000 75da81f0486a7d71d6b7a90c31504ae8 322 Gene3D G3DSA:2.60.120.10 2 151 6.0E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_12765 78d559a830d1e93da6bbcd66a1779446 193 Gene3D G3DSA:1.25.40.10 62 192 3.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12765 78d559a830d1e93da6bbcd66a1779446 193 SUPERFAMILY SSF48452 118 185 6.56E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08460 29d656df9f0427e8406521915b4e0bea 524 SUPERFAMILY SSF88688 413 522 4.25E-32 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily JO40_08460 29d656df9f0427e8406521915b4e0bea 524 Gene3D G3DSA:3.20.110.10 4 401 5.6E-99 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily JO40_08460 29d656df9f0427e8406521915b4e0bea 524 Pfam PF09210 Domain of unknown function (DUF1957) 421 520 2.0E-28 T 14-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JO40_08460 29d656df9f0427e8406521915b4e0bea 524 Gene3D G3DSA:1.20.1430.10 413 524 5.1E-30 T 14-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JO40_08460 29d656df9f0427e8406521915b4e0bea 524 Pfam PF03065 Glycosyl hydrolase family 57 8 239 1.4E-21 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 JO40_08460 29d656df9f0427e8406521915b4e0bea 524 SUPERFAMILY SSF88713 5 404 1.0E-75 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JO40_09585 1f7b306f7899a82cada982af9a9165a7 428 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 356 367 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_09585 1f7b306f7899a82cada982af9a9165a7 428 Pfam PF10531 SLBB domain 279 324 2.0E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO40_09585 1f7b306f7899a82cada982af9a9165a7 428 Gene3D G3DSA:1.10.1060.10 343 423 1.2E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO40_09585 1f7b306f7899a82cada982af9a9165a7 428 SUPERFAMILY SSF46548 315 423 2.62E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO40_09585 1f7b306f7899a82cada982af9a9165a7 428 Pfam PF13375 RnfC Barrel sandwich hybrid domain 27 100 1.2E-7 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain JO40_08595 92290728f89e04344ebfe698c1c0ca37 335 Gene3D G3DSA:3.20.20.210 2 333 1.5E-33 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_08595 92290728f89e04344ebfe698c1c0ca37 335 SUPERFAMILY SSF51726 3 334 8.55E-33 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_08595 92290728f89e04344ebfe698c1c0ca37 335 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 77 327 4.3E-9 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JO40_11970 4398df74ef0c679ee3dacfb509dbd90b 394 SUPERFAMILY SSF109604 199 376 1.38E-30 T 14-10-2018 JO40_11970 4398df74ef0c679ee3dacfb509dbd90b 394 Pfam PF13487 HD domain 268 328 3.0E-16 T 14-10-2018 JO40_11970 4398df74ef0c679ee3dacfb509dbd90b 394 Gene3D G3DSA:3.30.450.20 57 192 1.7E-5 T 14-10-2018 JO40_11970 4398df74ef0c679ee3dacfb509dbd90b 394 Gene3D G3DSA:1.10.3210.10 193 391 4.8E-62 T 14-10-2018 JO40_12160 7ebca84be5296568ca63126a5965ee81 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 66 4.2E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO40_12160 7ebca84be5296568ca63126a5965ee81 88 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 49 4.7E-8 T 14-10-2018 JO40_12160 7ebca84be5296568ca63126a5965ee81 88 SUPERFAMILY SSF143120 4 64 1.57E-14 T 14-10-2018 IPR036165 YefM-like superfamily JO40_12160 7ebca84be5296568ca63126a5965ee81 88 Gene3D G3DSA:3.40.1620.40 1 50 2.6E-6 T 14-10-2018 JO40_12985 f6f25e14d0e05586289c307bec066708 537 PRINTS PR00834 HtrA/DegQ protease family signature 170 182 6.0E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_12985 f6f25e14d0e05586289c307bec066708 537 PRINTS PR00834 HtrA/DegQ protease family signature 376 388 6.0E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_12985 f6f25e14d0e05586289c307bec066708 537 PRINTS PR00834 HtrA/DegQ protease family signature 273 290 6.0E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_12985 f6f25e14d0e05586289c307bec066708 537 PRINTS PR00834 HtrA/DegQ protease family signature 241 265 6.0E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO40_12985 f6f25e14d0e05586289c307bec066708 537 Gene3D G3DSA:2.40.10.10 130 229 1.2E-14 T 14-10-2018 JO40_12985 f6f25e14d0e05586289c307bec066708 537 Gene3D G3DSA:2.30.42.10 338 427 1.2E-9 T 14-10-2018 JO40_12985 f6f25e14d0e05586289c307bec066708 537 SUPERFAMILY SSF50156 311 414 5.26E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO40_12985 f6f25e14d0e05586289c307bec066708 537 SUPERFAMILY SSF50494 154 334 8.22E-43 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO40_12985 f6f25e14d0e05586289c307bec066708 537 Pfam PF13365 Trypsin-like peptidase domain 161 300 1.9E-25 T 14-10-2018 JO40_12985 f6f25e14d0e05586289c307bec066708 537 Gene3D G3DSA:2.40.10.10 232 337 6.6E-29 T 14-10-2018 JO40_01350 5c9a5af4a25ad494d2f658e34691e049 229 Gene3D G3DSA:3.40.50.360 1 227 1.0E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_01350 5c9a5af4a25ad494d2f658e34691e049 229 SUPERFAMILY SSF52218 1 144 1.2E-22 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_01350 5c9a5af4a25ad494d2f658e34691e049 229 Pfam PF03358 NADPH-dependent FMN reductase 1 137 5.9E-18 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JO40_01465 84994844ead1a8e4d36af3997cf525f6 163 Gene3D G3DSA:3.40.630.30 1 146 5.2E-20 T 14-10-2018 JO40_01465 84994844ead1a8e4d36af3997cf525f6 163 SUPERFAMILY SSF55729 1 158 1.23E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_01465 84994844ead1a8e4d36af3997cf525f6 163 Pfam PF13302 Acetyltransferase (GNAT) domain 3 138 7.3E-12 T 14-10-2018 IPR000182 GNAT domain JO40_10855 9f092d164d157d4af6ade1f1877013df 360 Gene3D G3DSA:3.40.50.10470 149 354 4.8E-69 T 14-10-2018 JO40_10855 9f092d164d157d4af6ade1f1877013df 360 Pfam PF01008 Initiation factor 2 subunit family 75 354 1.6E-39 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 JO40_10855 9f092d164d157d4af6ade1f1877013df 360 Gene3D G3DSA:1.20.120.420 48 148 4.8E-69 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 JO40_10855 9f092d164d157d4af6ade1f1877013df 360 SUPERFAMILY SSF100950 9 354 2.76E-72 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO40_09280 5575288bf927b83221c6e6f6fb22063b 418 Gene3D G3DSA:1.20.1530.20 12 410 2.0E-85 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JO40_09280 5575288bf927b83221c6e6f6fb22063b 418 Pfam PF00999 Sodium/hydrogen exchanger family 21 401 7.8E-55 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JO40_10075 9cae220619dd5a6408a7623130535469 178 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 17 166 4.2E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_10075 9cae220619dd5a6408a7623130535469 178 SUPERFAMILY SSF53098 16 169 2.12E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO40_10075 9cae220619dd5a6408a7623130535469 178 Gene3D G3DSA:3.30.420.10 16 170 1.4E-48 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO40_10075 9cae220619dd5a6408a7623130535469 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 121 140 5.1E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_10075 9cae220619dd5a6408a7623130535469 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 75 91 5.1E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_10075 9cae220619dd5a6408a7623130535469 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 97 113 5.1E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_10075 9cae220619dd5a6408a7623130535469 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 153 165 5.1E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_10075 9cae220619dd5a6408a7623130535469 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 18 31 5.1E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_10075 9cae220619dd5a6408a7623130535469 178 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 17 164 1.6E-49 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_10075 9cae220619dd5a6408a7623130535469 178 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 15 168 41.144 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 Gene3D G3DSA:3.40.50.300 252 577 3.0E-44 T 14-10-2018 JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 Pfam PF13541 Subunit ChlI of Mg-chelatase 128 173 2.0E-8 T 14-10-2018 JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 Pfam PF13541 Subunit ChlI of Mg-chelatase 18 97 7.4E-29 T 14-10-2018 JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 SUPERFAMILY SSF54211 4 89 8.72E-15 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 Pfam PF01078 Magnesium chelatase, subunit ChlI 254 459 7.1E-75 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 SUPERFAMILY SSF52540 253 573 6.25E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 Gene3D G3DSA:3.30.230.10 124 201 2.0E-12 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 SUPERFAMILY SSF54211 131 199 1.44E-15 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_12305 8797ab9328d196fb3ad69077a067bd33 582 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 470 572 5.7E-20 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 SUPERFAMILY SSF52540 307 537 3.68E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 Pfam PF00005 ABC transporter 363 493 9.6E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 SUPERFAMILY SSF52540 6 246 3.98E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 SMART SM00382 371 538 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 SMART SM00382 28 239 2.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 Pfam PF12848 ABC transporter 232 314 1.1E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 Gene3D G3DSA:3.40.50.300 290 578 2.3E-49 T 14-10-2018 JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 Pfam PF00005 ABC transporter 19 192 1.8E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 Gene3D G3DSA:3.40.50.300 4 286 1.2E-57 T 14-10-2018 JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_09650 c65b089518c8ea47dc6cdd78c7d9695a 684 Pfam PF16326 ABC transporter C-terminal domain 613 675 7.3E-9 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 533 37.268 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 Gene3D G3DSA:3.40.140.20 207 373 1.8E-51 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 Gene3D G3DSA:3.40.140.20 398 533 2.3E-49 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 SUPERFAMILY SSF53927 211 533 1.0E-104 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 Pfam PF02142 MGS-like domain 14 126 4.4E-23 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 Pfam PF01808 AICARFT/IMPCHase bienzyme 132 467 5.7E-99 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 PIRSF PIRSF000414 1 533 2.1E-195 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 SMART SM00798 132 468 1.5E-153 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 SMART SM00851 13 127 7.7E-46 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 533 3.8E-167 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 Gene3D G3DSA:3.40.50.1380 1 190 5.5E-79 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JO40_11240 f26eff135e2efc3c860777c7cd16f1b6 533 SUPERFAMILY SSF52335 2 191 2.22E-63 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JO40_07070 5ab5c0907ae46d1d5668f7c2009ed391 199 Gene3D G3DSA:3.90.220.20 22 194 9.1E-33 T 14-10-2018 JO40_07070 5ab5c0907ae46d1d5668f7c2009ed391 199 Pfam PF01420 Type I restriction modification DNA specificity domain 23 192 3.7E-10 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO40_07070 5ab5c0907ae46d1d5668f7c2009ed391 199 SUPERFAMILY SSF116734 15 194 8.5E-26 T 14-10-2018 JO40_03590 b4cb9ea7286ecd06da53071256701db4 413 Gene3D G3DSA:3.40.50.11390 157 306 1.2E-77 T 14-10-2018 JO40_03590 b4cb9ea7286ecd06da53071256701db4 413 Pfam PF12683 Protein of unknown function (DUF3798) 41 316 6.5E-129 T 14-10-2018 IPR024258 Protein of unknown function DUF3798 JO40_03590 b4cb9ea7286ecd06da53071256701db4 413 Gene3D G3DSA:3.40.50.11400 41 156 1.2E-77 T 14-10-2018 JO40_08580 b80984827885210647f41a530107db85 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 38 54 2.4E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JO40_08580 b80984827885210647f41a530107db85 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 81 99 2.4E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JO40_08580 b80984827885210647f41a530107db85 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 269 287 2.4E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JO40_08580 b80984827885210647f41a530107db85 385 Gene3D G3DSA:3.40.50.2300 158 287 4.1E-80 T 14-10-2018 JO40_08580 b80984827885210647f41a530107db85 385 Pfam PF13458 Periplasmic binding protein 37 361 1.3E-54 T 14-10-2018 IPR028081 Leucine-binding protein domain JO40_08580 b80984827885210647f41a530107db85 385 Gene3D G3DSA:3.40.50.2300 43 357 4.1E-80 T 14-10-2018 JO40_08580 b80984827885210647f41a530107db85 385 SUPERFAMILY SSF53822 36 384 2.35E-78 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO40_08050 7ef5f9b936c6025e81852abcb0fdf40f 87 Gene3D G3DSA:1.20.1280.290 7 87 1.5E-7 T 14-10-2018 JO40_08050 7ef5f9b936c6025e81852abcb0fdf40f 87 Pfam PF03083 Sugar efflux transporter for intercellular exchange 9 83 6.8E-6 T 14-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 JO40_08075 65a5372443d8838d2b58ea09f63cffea 455 Pfam PF01554 MatE 25 185 1.1E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_08075 65a5372443d8838d2b58ea09f63cffea 455 Pfam PF01554 MatE 246 406 6.9E-12 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_08075 65a5372443d8838d2b58ea09f63cffea 455 PIRSF PIRSF006603 1 454 6.3E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_01080 04b6999ab5e531bdcc0f7fd24d58bfb3 485 Gene3D G3DSA:3.20.20.240 1 417 2.2E-174 T 14-10-2018 JO40_01080 04b6999ab5e531bdcc0f7fd24d58bfb3 485 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 482 1.2E-221 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 JO40_01080 04b6999ab5e531bdcc0f7fd24d58bfb3 485 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 4 482 7.5E-235 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 JO40_01080 04b6999ab5e531bdcc0f7fd24d58bfb3 485 PIRSF PIRSF001495 1 483 4.4E-221 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 JO40_01080 04b6999ab5e531bdcc0f7fd24d58bfb3 485 Gene3D G3DSA:3.90.970.10 418 483 7.0E-29 T 14-10-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 JO40_01080 04b6999ab5e531bdcc0f7fd24d58bfb3 485 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 482 53.814 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 JO40_01080 04b6999ab5e531bdcc0f7fd24d58bfb3 485 SUPERFAMILY SSF51703 1 482 2.12E-206 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JO40_01340 0f6ba6fcb977983afdb9345ff0a27812 254 Gene3D G3DSA:3.40.50.150 46 252 1.5E-23 T 14-10-2018 JO40_01340 0f6ba6fcb977983afdb9345ff0a27812 254 SUPERFAMILY SSF53335 49 236 2.97E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_01340 0f6ba6fcb977983afdb9345ff0a27812 254 Pfam PF08241 Methyltransferase domain 60 156 3.6E-15 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 Pfam PF02872 5'-nucleotidase, C-terminal domain 347 493 3.5E-37 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 Pfam PF00149 Calcineurin-like phosphoesterase 51 271 1.3E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 Gene3D G3DSA:3.60.21.10 44 343 6.3E-71 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 Gene3D G3DSA:3.90.780.10 350 531 5.2E-48 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 SUPERFAMILY SSF56300 44 344 1.46E-69 T 14-10-2018 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 SUPERFAMILY SSF55816 343 529 1.57E-46 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 PRINTS PR01607 Apyrase family signature 254 277 1.6E-28 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 PRINTS PR01607 Apyrase family signature 280 300 1.6E-28 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 PRINTS PR01607 Apyrase family signature 470 489 1.6E-28 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 PRINTS PR01607 Apyrase family signature 228 245 1.6E-28 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 PRINTS PR01607 Apyrase family signature 47 65 1.6E-28 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_01260 cf72126b1e887a2de669f8c1353f1e24 533 PRINTS PR01607 Apyrase family signature 399 422 1.6E-28 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO40_04670 3cea80b1e84b38753b8e4b569a7eec39 602 SUPERFAMILY SSF161098 22 299 1.21E-41 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04670 3cea80b1e84b38753b8e4b569a7eec39 602 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 417 585 1.6E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_04670 3cea80b1e84b38753b8e4b569a7eec39 602 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 290 1.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_04670 3cea80b1e84b38753b8e4b569a7eec39 602 Gene3D G3DSA:1.10.3720.10 24 304 6.7E-42 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04670 3cea80b1e84b38753b8e4b569a7eec39 602 SUPERFAMILY SSF161098 323 595 1.01E-33 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04670 3cea80b1e84b38753b8e4b569a7eec39 602 Gene3D G3DSA:1.10.3720.10 314 589 5.5E-28 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04405 c58e24e4165a59635287f2e56ae706c5 119 SUPERFAMILY SSF46785 7 92 9.09E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_04405 c58e24e4165a59635287f2e56ae706c5 119 Gene3D G3DSA:1.10.10.10 8 119 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_04405 c58e24e4165a59635287f2e56ae706c5 119 SMART SM00345 15 74 5.0E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO40_04405 c58e24e4165a59635287f2e56ae706c5 119 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.7E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO40_06865 48145471ed33edf8ef17dc02f3285216 411 Pfam PF00999 Sodium/hydrogen exchanger family 26 381 7.8E-36 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JO40_06865 48145471ed33edf8ef17dc02f3285216 411 Gene3D G3DSA:1.20.1530.20 18 399 1.0E-43 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JO40_13170 515c3f121385add2c8be6fdd6c1b84d2 357 SUPERFAMILY SSF53822 44 291 2.2E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO40_13170 515c3f121385add2c8be6fdd6c1b84d2 357 Gene3D G3DSA:3.40.50.2300 143 346 9.8E-100 T 14-10-2018 JO40_13170 515c3f121385add2c8be6fdd6c1b84d2 357 Gene3D G3DSA:3.40.50.2300 33 313 9.8E-100 T 14-10-2018 JO40_13170 515c3f121385add2c8be6fdd6c1b84d2 357 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 32 350 1.0E-66 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 SUPERFAMILY SSF52540 274 478 1.68E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 Gene3D G3DSA:3.40.50.300 269 492 1.5E-55 T 14-10-2018 JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 Gene3D G3DSA:3.40.50.300 1 268 4.2E-60 T 14-10-2018 JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 SMART SM00382 28 218 7.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 SMART SM00382 299 482 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 Pfam PF00005 ABC transporter 19 169 2.7E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 SUPERFAMILY SSF52540 2 242 2.72E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05695 5d1c00801ce429f4dcd1d74d72a2eb92 493 Pfam PF00005 ABC transporter 290 427 6.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04450 bb03d59430a72712289fc0969a08c03e 171 Pfam PF01661 Macro domain 25 137 3.7E-44 T 14-10-2018 IPR002589 Macro domain JO40_04450 bb03d59430a72712289fc0969a08c03e 171 Gene3D G3DSA:3.40.220.10 2 171 2.9E-75 T 14-10-2018 JO40_04450 bb03d59430a72712289fc0969a08c03e 171 SUPERFAMILY SSF52949 7 170 3.87E-65 T 14-10-2018 JO40_04450 bb03d59430a72712289fc0969a08c03e 171 SMART SM00506 8 137 8.5E-46 T 14-10-2018 IPR002589 Macro domain JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 Gene3D G3DSA:3.40.50.300 1 253 5.3E-57 T 14-10-2018 JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 917 5.9E-60 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 926 18.114 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 PIRSF PIRSF005719 509 933 2.0E-101 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 PIRSF PIRSF005719 1 500 1.6E-99 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 SUPERFAMILY SSF52540 1 909 1.55E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 Gene3D G3DSA:3.40.50.300 773 937 1.8E-47 T 14-10-2018 JO40_11830 82276fe2e482402df646eb8fe2f2bdff 981 SUPERFAMILY SSF57997 569 764 4.97E-5 T 14-10-2018 JO40_10740 919bbaebe6a07a4d08e442e096d1a67f 252 Gene3D G3DSA:3.40.50.300 1 243 6.6E-62 T 14-10-2018 JO40_10740 919bbaebe6a07a4d08e442e096d1a67f 252 SUPERFAMILY SSF52540 1 224 3.06E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10740 919bbaebe6a07a4d08e442e096d1a67f 252 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_10740 919bbaebe6a07a4d08e442e096d1a67f 252 Pfam PF00005 ABC transporter 20 162 7.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_10740 919bbaebe6a07a4d08e442e096d1a67f 252 SMART SM00382 28 210 3.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 PIRSF PIRSF000876 1 372 5.3E-137 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 369 37.259 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 Pfam PF01339 CheB methylesterase 185 363 5.4E-59 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 SMART SM00448 4 120 1.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 Pfam PF00072 Response regulator receiver domain 6 112 5.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 SUPERFAMILY SSF52738 181 368 7.85E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 Gene3D G3DSA:3.40.50.180 174 370 2.0E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 SUPERFAMILY SSF52172 1 111 2.85E-28 T 14-10-2018 IPR011006 CheY-like superfamily JO40_02500 912b58481de8fb92dc6735e312ef2f54 372 Gene3D G3DSA:3.40.50.2300 1 140 2.8E-30 T 14-10-2018 JO40_00225 4fa0d674bd436a49ff24ab225b36ae15 257 TIGRFAM TIGR00476 selD: selenide, water dikinase 1 220 4.5E-73 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JO40_00225 4fa0d674bd436a49ff24ab225b36ae15 257 Gene3D G3DSA:3.90.650.10 69 257 1.0E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_00225 4fa0d674bd436a49ff24ab225b36ae15 257 SUPERFAMILY SSF56042 69 254 1.42E-49 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO40_00225 4fa0d674bd436a49ff24ab225b36ae15 257 Gene3D G3DSA:3.30.1330.10 1 68 8.3E-13 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_00225 4fa0d674bd436a49ff24ab225b36ae15 257 Pfam PF02769 AIR synthase related protein, C-terminal domain 74 256 3.9E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JO40_00225 4fa0d674bd436a49ff24ab225b36ae15 257 PIRSF PIRSF036407 1 257 7.4E-83 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JO40_00225 4fa0d674bd436a49ff24ab225b36ae15 257 SUPERFAMILY SSF55326 1 67 4.19E-13 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO40_04875 a6b907cdbf2c261f124e17c3ff24eb79 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 94 6.4E-21 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 JO40_04875 a6b907cdbf2c261f124e17c3ff24eb79 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 99 11.984 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 JO40_04875 a6b907cdbf2c261f124e17c3ff24eb79 101 SUPERFAMILY SSF143430 1 83 5.89E-13 T 14-10-2018 JO40_04875 a6b907cdbf2c261f124e17c3ff24eb79 101 Pfam PF09827 CRISPR associated protein Cas2 1 80 8.4E-16 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 JO40_02410 0395162d247aac06d0e49c9a5e9bb896 212 Gene3D G3DSA:3.30.70.330 102 176 7.6E-18 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JO40_02410 0395162d247aac06d0e49c9a5e9bb896 212 SUPERFAMILY SSF54928 133 179 7.66E-5 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 JO40_02410 0395162d247aac06d0e49c9a5e9bb896 212 Pfam PF03880 DbpA RNA binding domain 103 172 4.7E-20 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JO40_06130 d2b2c30dd87a563908911d0c9f179abf 421 SUPERFAMILY SSF52096 43 414 8.78E-40 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_06130 d2b2c30dd87a563908911d0c9f179abf 421 Pfam PF03572 Peptidase family S41 183 396 3.2E-25 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JO40_09510 ac90b64898142f4d87d0c91e78a122b2 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 1.0E-36 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 JO40_09510 ac90b64898142f4d87d0c91e78a122b2 86 SUPERFAMILY SSF143011 1 83 4.71E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_09510 ac90b64898142f4d87d0c91e78a122b2 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 1.1E-40 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 JO40_09510 ac90b64898142f4d87d0c91e78a122b2 86 Gene3D G3DSA:3.30.2310.20 1 84 9.9E-39 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_11130 59d17d45296448d99930d5203e55cb24 322 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 319 1.5E-108 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 JO40_11130 59d17d45296448d99930d5203e55cb24 322 SUPERFAMILY SSF53659 4 317 4.16E-100 T 14-10-2018 JO40_11130 59d17d45296448d99930d5203e55cb24 322 Gene3D G3DSA:3.40.718.10 1 322 1.1E-127 T 14-10-2018 JO40_11130 59d17d45296448d99930d5203e55cb24 322 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 316 5.6E-105 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 JO40_06330 d26de47121a8635fcac42b9cd986a820 511 Pfam PF17239 Family of unknown function (DUF5312) 290 502 1.3E-9 T 14-10-2018 IPR035196 Protein of unknown function DUF5312 JO40_03520 3fcf57ab0cb1c7155a80fa63f0541fe4 146 PIRSF PIRSF039090 2 137 1.0E-31 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JO40_03520 3fcf57ab0cb1c7155a80fa63f0541fe4 146 Gene3D G3DSA:1.20.120.340 1 130 1.8E-41 T 14-10-2018 JO40_03520 3fcf57ab0cb1c7155a80fa63f0541fe4 146 SUPERFAMILY SSF101116 6 126 3.79E-33 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 JO40_03520 3fcf57ab0cb1c7155a80fa63f0541fe4 146 TIGRFAM TIGR00208 fliS: flagellar protein FliS 5 129 2.3E-26 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JO40_03520 3fcf57ab0cb1c7155a80fa63f0541fe4 146 Pfam PF02561 Flagellar protein FliS 9 126 2.0E-37 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JO40_03615 c994ea0f8969491019f3f1d0af584e4d 539 Pfam PF09820 Predicted AAA-ATPase 10 295 5.4E-104 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_03615 c994ea0f8969491019f3f1d0af584e4d 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 441 534 3.1E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_03615 c994ea0f8969491019f3f1d0af584e4d 539 SUPERFAMILY SSF52540 35 230 2.74E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02240 e50dbeabf538ce93344f88c07b057a92 132 Pfam PF00410 Ribosomal protein S8 5 132 6.1E-50 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02240 e50dbeabf538ce93344f88c07b057a92 132 SUPERFAMILY SSF56047 3 132 1.09E-43 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02240 e50dbeabf538ce93344f88c07b057a92 132 Gene3D G3DSA:3.30.1370.30 4 78 2.4E-29 T 14-10-2018 JO40_02240 e50dbeabf538ce93344f88c07b057a92 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.075 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02240 e50dbeabf538ce93344f88c07b057a92 132 Gene3D G3DSA:3.30.1490.10 79 132 5.2E-23 T 14-10-2018 JO40_01175 daefeb27f355aa3bb2a9943886001b72 101 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 19 97 1.9E-30 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 JO40_01175 daefeb27f355aa3bb2a9943886001b72 101 SUPERFAMILY SSF54736 19 100 2.04E-27 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JO40_01175 daefeb27f355aa3bb2a9943886001b72 101 Gene3D G3DSA:3.30.1390.10 2 101 1.8E-35 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JO40_01175 daefeb27f355aa3bb2a9943886001b72 101 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 96 23.475 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS JO40_03345 cd2e4cd1a3fd7cc872cb1ada7a2d13b9 489 SUPERFAMILY SSF51905 1 376 5.18E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_03345 cd2e4cd1a3fd7cc872cb1ada7a2d13b9 489 Pfam PF04324 BFD-like [2Fe-2S] binding domain 407 460 6.7E-16 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JO40_03345 cd2e4cd1a3fd7cc872cb1ada7a2d13b9 489 Gene3D G3DSA:3.30.9.10 86 319 1.5E-123 T 14-10-2018 JO40_03345 cd2e4cd1a3fd7cc872cb1ada7a2d13b9 489 Gene3D G3DSA:3.50.50.60 3 353 1.5E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_03345 cd2e4cd1a3fd7cc872cb1ada7a2d13b9 489 Gene3D G3DSA:1.10.10.1100 395 470 4.4E-21 T 14-10-2018 JO40_03345 cd2e4cd1a3fd7cc872cb1ada7a2d13b9 489 Pfam PF01266 FAD dependent oxidoreductase 3 358 1.9E-67 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JO40_03345 cd2e4cd1a3fd7cc872cb1ada7a2d13b9 489 SUPERFAMILY SSF54373 223 315 6.87E-7 T 14-10-2018 JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 Pfam PF01590 GAF domain 31 188 4.5E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 SUPERFAMILY SSF109604 210 405 8.48E-31 T 14-10-2018 JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 SMART SM00471 209 374 1.0E-6 T 14-10-2018 IPR003607 HD/PDEase domain JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 Gene3D G3DSA:3.30.450.40 3 192 6.9E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 SMART SM00065 31 198 1.2E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 Pfam PF01966 HD domain 216 364 4.2E-14 T 14-10-2018 IPR006674 HD domain JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 Gene3D G3DSA:1.10.3210.10 193 417 1.4E-68 T 14-10-2018 JO40_03635 6a15206de7e1f34febbc59c4c8ead030 417 SUPERFAMILY SSF55781 19 202 1.2E-26 T 14-10-2018 JO40_04230 922ea010643b536018f8627035033471 264 SUPERFAMILY SSF100950 1 262 1.15E-102 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO40_04230 922ea010643b536018f8627035033471 264 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JO40_04230 922ea010643b536018f8627035033471 264 Gene3D G3DSA:3.40.50.1360 1 264 1.7E-113 T 14-10-2018 JO40_04230 922ea010643b536018f8627035033471 264 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 39.903 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JO40_04230 922ea010643b536018f8627035033471 264 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 15 219 2.0E-19 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 JO40_04230 922ea010643b536018f8627035033471 264 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.5E-123 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JO40_00675 302ee2b419974a0173e736d4408a5954 137 Gene3D G3DSA:1.20.120.50 1 136 2.7E-40 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO40_00675 302ee2b419974a0173e736d4408a5954 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 131 2.3E-41 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JO40_00675 302ee2b419974a0173e736d4408a5954 137 ProSitePatterns PS00550 Hemerythrin family signature. 61 84 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 JO40_00675 302ee2b419974a0173e736d4408a5954 137 Pfam PF01814 Hemerythrin HHE cation binding domain 14 129 1.6E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JO40_00675 302ee2b419974a0173e736d4408a5954 137 SUPERFAMILY SSF47188 3 131 4.84E-36 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO40_06560 7e826981394a8982afa9d159b92fd2fc 216 SUPERFAMILY SSF51569 1 214 1.15E-80 T 14-10-2018 JO40_06560 7e826981394a8982afa9d159b92fd2fc 216 Gene3D G3DSA:3.20.20.70 1 216 2.0E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_06560 7e826981394a8982afa9d159b92fd2fc 216 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 2 213 9.4E-77 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO40_06560 7e826981394a8982afa9d159b92fd2fc 216 PIRSF PIRSF001357 1 216 3.9E-80 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO40_06560 7e826981394a8982afa9d159b92fd2fc 216 SMART SM01133 2 215 4.0E-97 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO40_06560 7e826981394a8982afa9d159b92fd2fc 216 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 32.878 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 JO40_06560 7e826981394a8982afa9d159b92fd2fc 216 Pfam PF01791 DeoC/LacD family aldolase 6 194 1.2E-21 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO40_12365 6f7b171d5d3711eab7e9e95b4ded7062 204 Pfam PF00239 Resolvase, N terminal domain 2 143 6.9E-29 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JO40_12365 6f7b171d5d3711eab7e9e95b4ded7062 204 Gene3D G3DSA:3.40.50.1390 1 153 5.0E-28 T 14-10-2018 JO40_12365 6f7b171d5d3711eab7e9e95b4ded7062 204 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 JO40_12365 6f7b171d5d3711eab7e9e95b4ded7062 204 SUPERFAMILY SSF53041 1 144 3.53E-29 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 JO40_12365 6f7b171d5d3711eab7e9e95b4ded7062 204 SMART SM00857 2 144 8.9E-32 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JO40_07910 c3edbceb234c1fe46e1d40c13e71df28 137 Gene3D G3DSA:1.10.287.110 64 134 8.2E-8 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_07910 c3edbceb234c1fe46e1d40c13e71df28 137 SMART SM00271 64 125 1.6E-5 T 14-10-2018 IPR001623 DnaJ domain JO40_07910 c3edbceb234c1fe46e1d40c13e71df28 137 SUPERFAMILY SSF46565 65 120 8.37E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_02945 6cf47ee826032af0c32f393e99eabe52 299 Pfam PF14080 Domain of unknown function (DUF4261) 209 290 1.2E-28 T 14-10-2018 IPR025357 Domain of unknown function DUF4261 JO40_03425 69c904d628b74805fd5974ef0f0838d5 414 Pfam PF07690 Major Facilitator Superfamily 7 341 1.1E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JO40_03425 69c904d628b74805fd5974ef0f0838d5 414 SUPERFAMILY SSF103473 3 397 1.05E-33 T 14-10-2018 IPR036259 MFS transporter superfamily JO40_03425 69c904d628b74805fd5974ef0f0838d5 414 Gene3D G3DSA:1.20.1250.20 1 399 1.6E-27 T 14-10-2018 JO40_07600 ea5789d050219c833feb3c3a1ba15eca 246 SUPERFAMILY SSF110395 4 245 1.31E-66 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO40_07600 ea5789d050219c833feb3c3a1ba15eca 246 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 4 206 28.926 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO40_07600 ea5789d050219c833feb3c3a1ba15eca 246 Pfam PF03932 CutC family 5 203 8.6E-66 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO40_07600 ea5789d050219c833feb3c3a1ba15eca 246 Gene3D G3DSA:3.20.20.380 3 245 3.2E-81 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO40_03380 dd4f67d3a78bc660393b95002d328947 217 SMART SM00382 29 215 1.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03380 dd4f67d3a78bc660393b95002d328947 217 Gene3D G3DSA:3.40.50.300 1 217 2.3E-65 T 14-10-2018 JO40_03380 dd4f67d3a78bc660393b95002d328947 217 SUPERFAMILY SSF52540 3 216 7.8E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03380 dd4f67d3a78bc660393b95002d328947 217 Pfam PF00005 ABC transporter 20 166 8.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03380 dd4f67d3a78bc660393b95002d328947 217 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08165 8c206101c09dab9451d8dab33a0cf6c7 143 Pfam PF07977 FabA-like domain 11 133 4.3E-25 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO40_08165 8c206101c09dab9451d8dab33a0cf6c7 143 Gene3D G3DSA:3.10.129.10 2 142 9.6E-45 T 14-10-2018 JO40_08165 8c206101c09dab9451d8dab33a0cf6c7 143 SUPERFAMILY SSF54637 3 139 1.7E-39 T 14-10-2018 IPR029069 HotDog domain superfamily JO40_08290 f07bd18ded9973ae0d1eae954473bf66 257 Pfam PF04536 TPM domain 28 155 3.8E-25 T 14-10-2018 IPR007621 TPM domain JO40_08290 f07bd18ded9973ae0d1eae954473bf66 257 Gene3D G3DSA:3.10.310.50 17 161 1.3E-21 T 14-10-2018 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 SUPERFAMILY SSF103039 45 230 3.66E-26 T 14-10-2018 IPR028976 CheC-like superfamily JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.6E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.6E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.6E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.6E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 Gene3D G3DSA:2.30.330.10 243 329 1.3E-7 T 14-10-2018 IPR036429 SpoA-like superfamily JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 324 4.9E-20 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 Pfam PF02154 Flagellar motor switch protein FliM 39 229 4.8E-83 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 PIRSF PIRSF002888 1 333 4.4E-114 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 SUPERFAMILY SSF101801 250 326 4.84E-15 T 14-10-2018 IPR036429 SpoA-like superfamily JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 325 1.2E-130 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO40_05885 dc5bd93dbeba65b2da2ac0797aa1b0ab 344 Gene3D G3DSA:3.40.1550.10 45 232 4.9E-65 T 14-10-2018 IPR028976 CheC-like superfamily JO40_06565 3df4428a22d1c5bd51f3cc61e1754c68 160 Gene3D G3DSA:1.20.1260.10 1 160 4.5E-48 T 14-10-2018 IPR012347 Ferritin-like JO40_06565 3df4428a22d1c5bd51f3cc61e1754c68 160 Pfam PF00210 Ferritin-like domain 7 141 6.5E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JO40_06565 3df4428a22d1c5bd51f3cc61e1754c68 160 SUPERFAMILY SSF47240 1 159 9.41E-52 T 14-10-2018 IPR009078 Ferritin-like superfamily JO40_06455 462260d7f28a443215fd7ea2559d032a 332 Gene3D G3DSA:1.25.40.10 21 114 1.0E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 Pfam PF13181 Tetratricopeptide repeat 274 304 0.067 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 Pfam PF13181 Tetratricopeptide repeat 104 134 6.0E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 Pfam PF00515 Tetratricopeptide repeat 70 101 1.2E-6 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 35 68 9.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 137 170 0.064 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 205 238 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 240 273 5.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 103 136 0.029 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 69 102 2.0E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 171 204 6.5E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SMART SM00028 274 307 0.0025 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SUPERFAMILY SSF48452 214 307 1.14E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 SUPERFAMILY SSF48452 35 207 2.28E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 Gene3D G3DSA:1.25.40.10 210 325 2.1E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 Gene3D G3DSA:1.25.40.10 115 209 2.8E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06455 462260d7f28a443215fd7ea2559d032a 332 Pfam PF13432 Tetratricopeptide repeat 143 203 9.5E-5 T 14-10-2018 JO40_05770 ec51db12ff77066f451a94f56fa40c44 521 Gene3D G3DSA:3.40.720.10 160 476 1.6E-32 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JO40_05770 ec51db12ff77066f451a94f56fa40c44 521 SUPERFAMILY SSF53649 168 488 1.2E-21 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JO40_05770 ec51db12ff77066f451a94f56fa40c44 521 Pfam PF00884 Sulfatase 275 473 1.7E-10 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 JO40_07350 ed89067457c04f362f716bf79ecdb6be 316 Gene3D G3DSA:3.30.200.20 7 95 9.5E-27 T 14-10-2018 JO40_07350 ed89067457c04f362f716bf79ecdb6be 316 ProSitePatterns PS01058 SAICAR synthetase signature 2. 200 208 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_07350 ed89067457c04f362f716bf79ecdb6be 316 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 15 292 22.47 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_07350 ed89067457c04f362f716bf79ecdb6be 316 Pfam PF01259 SAICAR synthetase 19 259 1.8E-76 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JO40_07350 ed89067457c04f362f716bf79ecdb6be 316 Gene3D G3DSA:3.30.470.20 96 243 7.1E-50 T 14-10-2018 JO40_07350 ed89067457c04f362f716bf79ecdb6be 316 SUPERFAMILY SSF56104 14 295 1.37E-83 T 14-10-2018 JO40_04370 0fa5b12122da99c28965409d86e8ad04 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 280 2.6E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_04370 0fa5b12122da99c28965409d86e8ad04 294 SUPERFAMILY SSF161098 19 294 5.23E-53 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04370 0fa5b12122da99c28965409d86e8ad04 294 Gene3D G3DSA:1.10.3720.10 17 281 3.2E-45 T 14-10-2018 IPR035906 MetI-like superfamily JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 Pfam PF02073 Thermophilic metalloprotease (M29) 4 407 1.4E-159 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 SUPERFAMILY SSF144052 3 409 1.2E-136 T 14-10-2018 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 300 320 3.9E-56 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 155 177 3.9E-56 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 323 344 3.9E-56 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 388 407 3.9E-56 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 362 384 3.9E-56 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 244 263 3.9E-56 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 3.9E-56 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 JO40_08870 a85ce9e081a50b9ec7418e22ee4687ff 409 Gene3D G3DSA:3.40.1830.10 1 179 5.9E-58 T 14-10-2018 IPR035097 Peptidase M29, N-terminal JO40_03920 514da320eb196355a4aa90cb6fb622fc 332 SMART SM00382 49 244 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03920 514da320eb196355a4aa90cb6fb622fc 332 Pfam PF00005 ABC transporter 40 194 1.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03920 514da320eb196355a4aa90cb6fb622fc 332 SUPERFAMILY SSF52540 28 265 7.61E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03920 514da320eb196355a4aa90cb6fb622fc 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 331 4.2E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_03920 514da320eb196355a4aa90cb6fb622fc 332 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03920 514da320eb196355a4aa90cb6fb622fc 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 311 3.2E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_03920 514da320eb196355a4aa90cb6fb622fc 332 Gene3D G3DSA:3.40.50.300 25 332 2.9E-86 T 14-10-2018 JO40_02960 b05d0e1201d4892ddec949432ef748cc 269 SUPERFAMILY SSF53474 11 266 6.87E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_02960 b05d0e1201d4892ddec949432ef748cc 269 PRINTS PR00412 Epoxide hydrolase signature 242 264 4.7E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JO40_02960 b05d0e1201d4892ddec949432ef748cc 269 PRINTS PR00412 Epoxide hydrolase signature 50 65 4.7E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JO40_02960 b05d0e1201d4892ddec949432ef748cc 269 Pfam PF12697 Alpha/beta hydrolase family 27 259 4.3E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_02960 b05d0e1201d4892ddec949432ef748cc 269 Gene3D G3DSA:3.40.50.1820 1 266 6.9E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 108 181 2.5E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 Gene3D G3DSA:3.30.750.44 52 352 9.5E-86 T 14-10-2018 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 SMART SM00245 186 377 2.2E-74 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 SUPERFAMILY SSF50156 76 215 3.68E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 SMART SM00228 107 185 5.3E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 Gene3D G3DSA:2.30.42.10 107 200 9.5E-86 T 14-10-2018 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 68 385 2.1E-94 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 Gene3D G3DSA:3.90.226.10 201 374 9.5E-86 T 14-10-2018 JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 SUPERFAMILY SSF52096 41 381 3.15E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_10015 920afb980fb9df08e7d9b0f66f9f2044 492 Pfam PF03572 Peptidase family S41 211 376 3.6E-52 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JO40_02895 d7ec78a41fbff817376afb70cf4aec18 165 Gene3D G3DSA:3.40.1760.10 1 165 5.4E-55 T 14-10-2018 IPR035944 YfbM-like super family JO40_02895 d7ec78a41fbff817376afb70cf4aec18 165 SUPERFAMILY SSF111069 3 165 6.67E-56 T 14-10-2018 IPR035944 YfbM-like super family JO40_02895 d7ec78a41fbff817376afb70cf4aec18 165 Pfam PF08974 Domain of unknown function (DUF1877) 1 162 1.4E-46 T 14-10-2018 IPR015068 Protein of unknown function DUF1877 JO40_05575 55e52c61f38415c75027c886de27813a 213 SUPERFAMILY SSF53955 145 200 1.74E-9 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO40_05575 55e52c61f38415c75027c886de27813a 213 Pfam PF00912 Transglycosylase 146 204 3.6E-9 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_05575 55e52c61f38415c75027c886de27813a 213 Gene3D G3DSA:1.10.3810.10 130 213 2.0E-8 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO40_05725 cb1fbe3aac2c8211e7f3ae594e5c10f1 160 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 74 6.5E-8 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JO40_05725 cb1fbe3aac2c8211e7f3ae594e5c10f1 160 Gene3D G3DSA:2.30.110.10 5 152 2.2E-26 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO40_05725 cb1fbe3aac2c8211e7f3ae594e5c10f1 160 SUPERFAMILY SSF50475 9 112 2.07E-15 T 14-10-2018 JO40_05265 277fa07849671e65d5d08ff63f6b1c18 450 Pfam PF10117 McrBC 5-methylcytosine restriction system component 86 390 1.1E-48 T 14-10-2018 IPR019292 5-methylcytosine restriction system component JO40_09050 09dda3100c9ec2eb8eef1240b9161431 204 SUPERFAMILY SSF48452 28 153 4.44E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_09050 09dda3100c9ec2eb8eef1240b9161431 204 SMART SM00028 102 135 3.9E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_09050 09dda3100c9ec2eb8eef1240b9161431 204 Gene3D G3DSA:1.25.40.10 17 158 4.3E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_09050 09dda3100c9ec2eb8eef1240b9161431 204 Pfam PF00515 Tetratricopeptide repeat 103 134 6.7E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_01230 457bf95c2df37bf24dd263f66e0a8500 135 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 129 9.906 T 14-10-2018 IPR022907 VapC family GO:0004540 JO40_01230 457bf95c2df37bf24dd263f66e0a8500 135 SUPERFAMILY SSF88723 1 130 1.32E-34 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_01230 457bf95c2df37bf24dd263f66e0a8500 135 Pfam PF01850 PIN domain 3 121 9.9E-10 T 14-10-2018 IPR002716 PIN domain JO40_01230 457bf95c2df37bf24dd263f66e0a8500 135 Gene3D G3DSA:3.40.50.1010 1 131 6.1E-34 T 14-10-2018 JO40_03455 6148cb129af71e3801ab219aaf629f83 506 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 29 494 43.448 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JO40_03455 6148cb129af71e3801ab219aaf629f83 506 Gene3D G3DSA:3.90.1150.10 347 493 1.2E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_03455 6148cb129af71e3801ab219aaf629f83 506 PIRSF PIRSF000412 8 498 3.7E-177 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JO40_03455 6148cb129af71e3801ab219aaf629f83 506 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 286 302 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JO40_03455 6148cb129af71e3801ab219aaf629f83 506 Pfam PF00464 Serine hydroxymethyltransferase 33 134 5.4E-30 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JO40_03455 6148cb129af71e3801ab219aaf629f83 506 Pfam PF00464 Serine hydroxymethyltransferase 175 447 2.5E-93 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JO40_03455 6148cb129af71e3801ab219aaf629f83 506 SUPERFAMILY SSF53383 16 496 4.23E-149 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 SUPERFAMILY SSF51735 206 483 1.91E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 SMART SM01274 44 193 9.7E-47 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 Pfam PF00390 Malic enzyme, N-terminal domain 63 193 3.0E-17 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 SMART SM00919 205 436 7.4E-95 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 Gene3D G3DSA:3.40.50.10380 1 202 6.4E-62 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 Gene3D G3DSA:3.40.50.720 203 496 9.7E-103 T 14-10-2018 JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 SUPERFAMILY SSF53223 6 204 7.91E-42 T 14-10-2018 JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 Pfam PF03949 Malic enzyme, NAD binding domain 206 420 2.3E-22 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JO40_08335 1aa4b03d6c32051b4aa284ec49306961 498 PIRSF PIRSF000106 3 485 1.4E-105 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO40_06585 51e5e40107c35c7cf638c782fbec24a3 477 Gene3D G3DSA:3.30.70.360 322 388 9.9E-11 T 14-10-2018 JO40_06585 51e5e40107c35c7cf638c782fbec24a3 477 Pfam PF01546 Peptidase family M20/M25/M40 112 475 5.6E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO40_06585 51e5e40107c35c7cf638c782fbec24a3 477 SUPERFAMILY SSF53187 32 476 9.14E-47 T 14-10-2018 JO40_06585 51e5e40107c35c7cf638c782fbec24a3 477 Gene3D G3DSA:3.40.630.10 389 465 9.9E-11 T 14-10-2018 JO40_06585 51e5e40107c35c7cf638c782fbec24a3 477 SUPERFAMILY SSF55031 234 384 3.35E-10 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO40_06585 51e5e40107c35c7cf638c782fbec24a3 477 Pfam PF07687 Peptidase dimerisation domain 230 378 5.9E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO40_06585 51e5e40107c35c7cf638c782fbec24a3 477 Gene3D G3DSA:3.40.630.10 35 239 2.2E-38 T 14-10-2018 JO40_01165 bef70025db5a91e0645179d44c26bba3 205 Pfam PF02677 Uncharacterized BCR, COG1636 26 204 1.3E-62 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 JO40_01165 bef70025db5a91e0645179d44c26bba3 205 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 26 205 29.953 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 JO40_10490 f68a7811999c50392deed674b2fb3349 278 SMART SM00271 5 68 7.4E-13 T 14-10-2018 IPR001623 DnaJ domain JO40_10490 f68a7811999c50392deed674b2fb3349 278 Pfam PF00226 DnaJ domain 7 65 1.8E-10 T 14-10-2018 IPR001623 DnaJ domain JO40_10490 f68a7811999c50392deed674b2fb3349 278 Gene3D G3DSA:1.25.40.10 195 278 1.6E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10490 f68a7811999c50392deed674b2fb3349 278 SUPERFAMILY SSF48452 208 261 3.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10490 f68a7811999c50392deed674b2fb3349 278 Gene3D G3DSA:1.10.287.110 1 93 2.9E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_10490 f68a7811999c50392deed674b2fb3349 278 SUPERFAMILY SSF46565 4 66 2.22E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_09235 811f4ebebbc256d76b3a392aa2c0f70a 388 Pfam PF12710 haloacid dehalogenase-like hydrolase 181 319 2.5E-7 T 14-10-2018 JO40_09235 811f4ebebbc256d76b3a392aa2c0f70a 388 Gene3D G3DSA:3.40.50.1000 12 365 1.4E-86 T 14-10-2018 IPR023214 HAD superfamily JO40_09235 811f4ebebbc256d76b3a392aa2c0f70a 388 SUPERFAMILY SSF56784 10 328 3.42E-21 T 14-10-2018 IPR036412 HAD-like superfamily JO40_09235 811f4ebebbc256d76b3a392aa2c0f70a 388 Gene3D G3DSA:1.20.1440.320 58 211 1.4E-86 T 14-10-2018 JO40_03950 6e8b26c22998b78158862b07ddf64561 300 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 231 296 3.3E-7 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JO40_03950 6e8b26c22998b78158862b07ddf64561 300 Gene3D G3DSA:3.30.1220.10 198 299 1.8E-5 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily JO40_03950 6e8b26c22998b78158862b07ddf64561 300 SUPERFAMILY SSF90002 226 296 2.09E-6 T 14-10-2018 JO40_03950 6e8b26c22998b78158862b07ddf64561 300 SUPERFAMILY SSF52540 2 192 3.6E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03950 6e8b26c22998b78158862b07ddf64561 300 Gene3D G3DSA:3.40.50.300 1 187 2.9E-42 T 14-10-2018 JO40_03950 6e8b26c22998b78158862b07ddf64561 300 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 175 5.5E-35 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JO40_08730 dbc8200df4d1b43bea177a166c1e3557 207 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 20 206 3.5E-51 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 JO40_08730 dbc8200df4d1b43bea177a166c1e3557 207 Pfam PF02390 Putative methyltransferase 34 200 5.5E-54 T 14-10-2018 JO40_08730 dbc8200df4d1b43bea177a166c1e3557 207 SUPERFAMILY SSF53335 9 204 3.91E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_08730 dbc8200df4d1b43bea177a166c1e3557 207 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 4 207 27.958 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 JO40_08730 dbc8200df4d1b43bea177a166c1e3557 207 Gene3D G3DSA:3.40.50.150 1 207 5.0E-62 T 14-10-2018 JO40_11055 6d1134142bbb87d630b7871288023006 344 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 225 237 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site JO40_11055 6d1134142bbb87d630b7871288023006 344 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 96 110 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site JO40_11055 6d1134142bbb87d630b7871288023006 344 Gene3D G3DSA:1.10.600.10 45 342 2.1E-74 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JO40_11055 6d1134142bbb87d630b7871288023006 344 SUPERFAMILY SSF48576 46 342 7.04E-66 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JO40_11055 6d1134142bbb87d630b7871288023006 344 Pfam PF00348 Polyprenyl synthetase 49 283 2.1E-54 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 JO40_10275 123f837402958ae5ba867018f2a7a992 256 ProSitePatterns PS01228 Hypothetical cof family signature 1. 2 13 - T 14-10-2018 JO40_10275 123f837402958ae5ba867018f2a7a992 256 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 249 5.9E-60 T 14-10-2018 JO40_10275 123f837402958ae5ba867018f2a7a992 256 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 2 222 1.1E-30 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JO40_10275 123f837402958ae5ba867018f2a7a992 256 Gene3D G3DSA:3.30.1240.10 79 178 5.2E-59 T 14-10-2018 JO40_10275 123f837402958ae5ba867018f2a7a992 256 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 2 249 1.3E-53 T 14-10-2018 IPR000150 Cof family GO:0016787 JO40_10275 123f837402958ae5ba867018f2a7a992 256 Gene3D G3DSA:3.40.50.1000 3 249 5.2E-59 T 14-10-2018 IPR023214 HAD superfamily JO40_10275 123f837402958ae5ba867018f2a7a992 256 SUPERFAMILY SSF56784 2 250 5.79E-58 T 14-10-2018 IPR036412 HAD-like superfamily JO40_08305 3ee74f40def4acf6ff967f3f94cca51f 347 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 347 43.799 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO40_08305 3ee74f40def4acf6ff967f3f94cca51f 347 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 347 8.9E-129 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO40_08305 3ee74f40def4acf6ff967f3f94cca51f 347 SUPERFAMILY SSF111337 5 347 1.23E-122 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO40_08305 3ee74f40def4acf6ff967f3f94cca51f 347 Pfam PF02547 Queuosine biosynthesis protein 4 346 4.0E-129 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO40_08305 3ee74f40def4acf6ff967f3f94cca51f 347 Gene3D G3DSA:2.40.10.240 64 167 2.8E-118 T 14-10-2018 JO40_08305 3ee74f40def4acf6ff967f3f94cca51f 347 Gene3D G3DSA:3.40.1780.10 14 346 2.8E-118 T 14-10-2018 JO40_05045 f682ee31c23e21019c026422a5126d18 69 Pfam PF08011 PD-(D/E)XK nuclease superfamily 2 64 3.1E-13 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_10355 855c32ad2691474247d486b22489c1da 282 Pfam PF12838 4Fe-4S dicluster domain 140 182 1.9E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_10355 855c32ad2691474247d486b22489c1da 282 SUPERFAMILY SSF54862 209 279 6.21E-15 T 14-10-2018 JO40_10355 855c32ad2691474247d486b22489c1da 282 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 97 3.8E-20 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 JO40_10355 855c32ad2691474247d486b22489c1da 282 Gene3D G3DSA:3.30.70.20 130 193 4.4E-15 T 14-10-2018 JO40_10355 855c32ad2691474247d486b22489c1da 282 Pfam PF04060 Putative Fe-S cluster 44 76 2.2E-14 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 JO40_10355 855c32ad2691474247d486b22489c1da 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_10355 855c32ad2691474247d486b22489c1da 282 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 192 27.894 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 JO40_10355 855c32ad2691474247d486b22489c1da 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_10355 855c32ad2691474247d486b22489c1da 282 Gene3D G3DSA:3.30.70.20 213 264 6.6E-11 T 14-10-2018 JO40_10355 855c32ad2691474247d486b22489c1da 282 Pfam PF13187 4Fe-4S dicluster domain 217 259 1.7E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_10355 855c32ad2691474247d486b22489c1da 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 217 228 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_10355 855c32ad2691474247d486b22489c1da 282 Gene3D G3DSA:3.20.20.20 34 97 4.3E-13 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO40_10355 855c32ad2691474247d486b22489c1da 282 SUPERFAMILY SSF54862 72 190 7.19E-16 T 14-10-2018 JO40_03280 660e9388490b246598f77c27666a904f 609 SUPERFAMILY SSF90123 14 332 3.01E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03280 660e9388490b246598f77c27666a904f 609 SUPERFAMILY SSF52540 354 597 8.05E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03280 660e9388490b246598f77c27666a904f 609 Gene3D G3DSA:1.20.1560.10 4 335 8.6E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03280 660e9388490b246598f77c27666a904f 609 Gene3D G3DSA:3.40.50.300 357 608 5.2E-90 T 14-10-2018 JO40_03280 660e9388490b246598f77c27666a904f 609 Pfam PF00664 ABC transporter transmembrane region 37 303 3.3E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_03280 660e9388490b246598f77c27666a904f 609 Pfam PF00005 ABC transporter 378 526 2.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03280 660e9388490b246598f77c27666a904f 609 SMART SM00382 386 572 6.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03770 e33cd51303531dd11d3bc17a1d368ea6 626 Pfam PF10593 Z1 domain 256 452 1.2E-29 T 14-10-2018 IPR018310 Putative endonuclease, Z1 domain JO40_03770 e33cd51303531dd11d3bc17a1d368ea6 626 SUPERFAMILY SSF52540 42 401 1.02E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01135 0fecc80df7a054ada991cad6f44b1315 429 Pfam PF03687 Uncharacterised protein family (UPF0164) 12 331 2.3E-121 T 14-10-2018 IPR005362 Uncharacterised protein family UPF0164 JO40_01135 0fecc80df7a054ada991cad6f44b1315 429 Gene3D G3DSA:1.25.40.10 363 417 6.3E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01135 0fecc80df7a054ada991cad6f44b1315 429 SUPERFAMILY SSF48452 323 414 5.31E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06800 035f332e8825066575120b4d887c6b0d 77 Hamap MF_00088 UPF0109 protein . 2 76 22.589 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 JO40_06800 035f332e8825066575120b4d887c6b0d 77 SUPERFAMILY SSF54814 5 63 4.9E-8 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO40_06800 035f332e8825066575120b4d887c6b0d 77 Pfam PF13083 KH domain 3 75 7.9E-25 T 14-10-2018 JO40_06800 035f332e8825066575120b4d887c6b0d 77 Gene3D G3DSA:3.30.300.20 5 70 2.8E-6 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_05930 b7b8d5d3a44d382f0ba3ca9bd0ffea33 71 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 18 56 3.3E-6 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JO40_11445 7841a242d8d34401efee8c64a0a5c5d4 122 SUPERFAMILY SSF51230 4 121 4.94E-37 T 14-10-2018 IPR011053 Single hybrid motif JO40_11445 7841a242d8d34401efee8c64a0a5c5d4 122 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 122 36.52 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 JO40_11445 7841a242d8d34401efee8c64a0a5c5d4 122 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JO40_11445 7841a242d8d34401efee8c64a0a5c5d4 122 Pfam PF01597 Glycine cleavage H-protein 8 121 7.8E-37 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate JO40_11445 7841a242d8d34401efee8c64a0a5c5d4 122 Gene3D G3DSA:2.40.50.100 1 122 5.9E-43 T 14-10-2018 JO40_11445 7841a242d8d34401efee8c64a0a5c5d4 122 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 120 8.2E-39 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 JO40_05830 5e63ee9f4bd458a005c1f9e0fbf19921 109 Gene3D G3DSA:3.10.450.50 1 109 3.0E-11 T 14-10-2018 JO40_05830 5e63ee9f4bd458a005c1f9e0fbf19921 109 Pfam PF12680 SnoaL-like domain 8 79 2.5E-7 T 14-10-2018 IPR037401 SnoaL-like domain JO40_05830 5e63ee9f4bd458a005c1f9e0fbf19921 109 SUPERFAMILY SSF54427 2 107 6.59E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily JO40_06980 c6cbe2fdf6abe54d5991dca3a2d86f81 311 Pfam PF01963 TraB family 49 309 2.7E-50 T 14-10-2018 IPR002816 Pheromone shutdown, TraB JO40_05875 b2a61f5fddef13049d816dc5ba901ade 239 SUPERFAMILY SSF103088 113 233 2.49E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_05875 b2a61f5fddef13049d816dc5ba901ade 239 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 53 3.6E-16 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain JO40_05875 b2a61f5fddef13049d816dc5ba901ade 239 Gene3D G3DSA:3.30.1330.60 79 238 2.4E-41 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_05875 b2a61f5fddef13049d816dc5ba901ade 239 Pfam PF00691 OmpA family 125 227 6.6E-19 T 14-10-2018 IPR006665 OmpA-like domain JO40_01405 0680823a08a31bf9d4d52f2fb03fdb91 414 SUPERFAMILY SSF53850 22 321 1.28E-19 T 14-10-2018 JO40_01405 0680823a08a31bf9d4d52f2fb03fdb91 414 Gene3D G3DSA:3.40.190.10 26 399 2.2E-17 T 14-10-2018 JO40_01405 0680823a08a31bf9d4d52f2fb03fdb91 414 Pfam PF13416 Bacterial extracellular solute-binding protein 99 318 1.2E-6 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO40_09315 9db9547bd405ef58a332e6eb9d45eb28 132 Pfam PF01381 Helix-turn-helix 79 128 1.4E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_09315 9db9547bd405ef58a332e6eb9d45eb28 132 Gene3D G3DSA:3.30.160.250 1 78 1.4E-15 T 14-10-2018 JO40_09315 9db9547bd405ef58a332e6eb9d45eb28 132 Gene3D G3DSA:1.10.260.40 79 132 9.7E-10 T 14-10-2018 JO40_09315 9db9547bd405ef58a332e6eb9d45eb28 132 SMART SM00530 78 132 0.0023 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_09315 9db9547bd405ef58a332e6eb9d45eb28 132 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 8 73 5.8E-9 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system JO40_09315 9db9547bd405ef58a332e6eb9d45eb28 132 SUPERFAMILY SSF143100 7 61 1.02E-14 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO40_09315 9db9547bd405ef58a332e6eb9d45eb28 132 SUPERFAMILY SSF47413 78 128 4.02E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 SUPERFAMILY SSF53244 378 539 3.36E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 53 536 7.0E-150 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 Gene3D G3DSA:3.40.1390.10 18 127 2.0E-16 T 14-10-2018 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 Pfam PF02875 Mur ligase family, glutamate ligase domain 378 464 6.8E-16 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 Pfam PF01225 Mur ligase family, catalytic domain 58 98 1.3E-6 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 536 29.496 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 Pfam PF08245 Mur ligase middle domain 137 356 1.3E-39 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 Gene3D G3DSA:3.90.190.20 382 541 4.3E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 SUPERFAMILY SSF53623 128 376 4.45E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 SUPERFAMILY SSF63418 32 126 4.58E-16 T 14-10-2018 IPR035911 MurE/MurF, N-terminal JO40_08180 ecdc772ee1d6ab55f9d6110ac9b56c11 544 Gene3D G3DSA:3.40.1190.10 128 381 6.0E-63 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO40_11510 f58d8c819861592063e467838a2fffb3 282 Gene3D G3DSA:3.30.70.1070 202 277 1.4E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO40_11510 f58d8c819861592063e467838a2fffb3 282 SUPERFAMILY SSF110997 202 275 2.88E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO40_11510 f58d8c819861592063e467838a2fffb3 282 Pfam PF05036 Sporulation related domain 202 275 8.8E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JO40_02975 72b648028f3def75a2174802d0e40a88 160 SUPERFAMILY SSF55729 2 149 6.56E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_02975 72b648028f3def75a2174802d0e40a88 160 Gene3D G3DSA:3.40.630.30 48 157 8.5E-21 T 14-10-2018 JO40_02975 72b648028f3def75a2174802d0e40a88 160 Pfam PF00583 Acetyltransferase (GNAT) family 19 143 2.1E-11 T 14-10-2018 IPR000182 GNAT domain JO40_03405 3e4d9dd3649e336752a01c04c53beffa 121 SMART SM00345 17 76 8.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO40_03405 3e4d9dd3649e336752a01c04c53beffa 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 2.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO40_03405 3e4d9dd3649e336752a01c04c53beffa 121 Gene3D G3DSA:1.10.10.10 10 121 1.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_03405 3e4d9dd3649e336752a01c04c53beffa 121 SUPERFAMILY SSF46785 6 80 1.02E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 172 8.1E-34 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 Gene3D G3DSA:3.30.110.10 78 175 2.8E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 SUPERFAMILY SSF54364 6 80 7.32E-29 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 SUPERFAMILY SSF55200 87 175 7.32E-29 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 Gene3D G3DSA:3.10.20.80 4 77 2.0E-31 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 174 29.685 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 174 3.9E-64 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO40_08810 71906a9f8258b200e163e7734d41e1b8 175 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 77 4.4E-30 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 Pfam PF00005 ABC transporter 31 182 5.9E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 SUPERFAMILY SSF52540 291 517 1.14E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 SMART SM00382 323 513 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 SMART SM00382 40 232 2.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 Gene3D G3DSA:3.40.50.300 1 290 3.2E-55 T 14-10-2018 JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 Pfam PF00005 ABC transporter 318 465 4.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 SUPERFAMILY SSF52540 5 247 1.11E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 Gene3D G3DSA:3.40.50.300 291 534 1.5E-47 T 14-10-2018 JO40_08130 87eda1b2a8e2ba5909d97091058f978c 538 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_00585 842e3afeec81173fdb828de2fa8601f4 310 SUPERFAMILY SSF143865 30 242 6.15E-20 T 14-10-2018 JO40_00585 842e3afeec81173fdb828de2fa8601f4 310 SUPERFAMILY SSF144083 246 308 8.63E-22 T 14-10-2018 JO40_00585 842e3afeec81173fdb828de2fa8601f4 310 Pfam PF01544 CorA-like Mg2+ transporter protein 31 306 2.6E-43 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 JO40_00585 842e3afeec81173fdb828de2fa8601f4 310 Gene3D G3DSA:1.20.58.340 125 251 1.6E-6 T 14-10-2018 JO40_00585 842e3afeec81173fdb828de2fa8601f4 310 Gene3D G3DSA:1.20.58.340 253 310 3.6E-21 T 14-10-2018 JO40_08525 dab1fd5f24c1a3af888a2569504d4844 202 Gene3D G3DSA:3.40.30.10 20 200 5.7E-28 T 14-10-2018 JO40_08525 dab1fd5f24c1a3af888a2569504d4844 202 ProSitePatterns PS00194 Thioredoxin family active site. 81 99 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JO40_08525 dab1fd5f24c1a3af888a2569504d4844 202 SUPERFAMILY SSF52833 58 191 1.15E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO40_08525 dab1fd5f24c1a3af888a2569504d4844 202 Pfam PF00578 AhpC/TSA family 58 173 7.2E-12 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 SUPERFAMILY SSF52540 328 575 1.09E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 Gene3D G3DSA:1.20.1560.10 1 321 7.0E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 Pfam PF00005 ABC transporter 357 505 5.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 SMART SM00382 365 551 4.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 SUPERFAMILY SSF90123 4 319 3.01E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 Pfam PF00664 ABC transporter transmembrane region 18 293 1.4E-38 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_04215 055328da773ce6c9fba9f9ed6e5b1a90 581 Gene3D G3DSA:3.40.50.300 328 581 8.9E-76 T 14-10-2018 JO40_06655 ffd038cba891da8976d05de888441588 93 SMART SM00530 35 91 0.0029 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_06655 ffd038cba891da8976d05de888441588 93 Pfam PF13744 Helix-turn-helix domain 10 91 2.3E-13 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain JO40_06655 ffd038cba891da8976d05de888441588 93 Gene3D G3DSA:1.10.260.40 16 93 2.3E-10 T 14-10-2018 JO40_06655 ffd038cba891da8976d05de888441588 93 SUPERFAMILY SSF47413 24 91 5.23E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_01215 d0af4895b264bf6c317616ec1896451d 170 Gene3D G3DSA:1.20.120.450 1 168 2.8E-61 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO40_01215 d0af4895b264bf6c317616ec1896451d 170 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 4.5E-61 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 JO40_01215 d0af4895b264bf6c317616ec1896451d 170 PIRSF PIRSF031551 1 170 2.5E-67 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 JO40_01215 d0af4895b264bf6c317616ec1896451d 170 SUPERFAMILY SSF109854 4 143 1.54E-8 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO40_06620 c7da3514b3ca5cb074d33ea7ec5cb05b 108 Pfam PF04723 Glycine reductase complex selenoprotein A 1 101 9.1E-52 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 JO40_06620 c7da3514b3ca5cb074d33ea7ec5cb05b 108 PIRSF PIRSF000181 1 108 8.6E-49 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 JO40_05290 25832e26fa84a2787618ca715be79ae0 343 Gene3D G3DSA:1.20.1090.10 162 343 5.2E-48 T 14-10-2018 JO40_05290 25832e26fa84a2787618ca715be79ae0 343 SUPERFAMILY SSF56796 21 343 1.31E-70 T 14-10-2018 JO40_05290 25832e26fa84a2787618ca715be79ae0 343 PIRSF PIRSF001455 1 343 2.6E-109 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JO40_05290 25832e26fa84a2787618ca715be79ae0 343 Pfam PF01761 3-dehydroquinate synthase 56 313 1.5E-79 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JO40_05290 25832e26fa84a2787618ca715be79ae0 343 Gene3D G3DSA:3.40.50.1970 11 161 8.6E-41 T 14-10-2018 JO40_08250 434f9111fb34ce0048909a553b3d2af4 131 PIRSF PIRSF003230 1 127 3.2E-28 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JO40_08250 434f9111fb34ce0048909a553b3d2af4 131 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 121 1.5E-22 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JO40_08250 434f9111fb34ce0048909a553b3d2af4 131 Pfam PF13279 Thioesterase-like superfamily 10 123 2.8E-17 T 14-10-2018 JO40_08250 434f9111fb34ce0048909a553b3d2af4 131 Gene3D G3DSA:3.10.129.10 1 126 6.5E-36 T 14-10-2018 JO40_08250 434f9111fb34ce0048909a553b3d2af4 131 SUPERFAMILY SSF54637 2 124 1.48E-36 T 14-10-2018 IPR029069 HotDog domain superfamily JO40_00470 143b92f8d55ca332019bf9816adba0f1 261 Gene3D G3DSA:3.40.50.300 1 255 4.5E-64 T 14-10-2018 JO40_00470 143b92f8d55ca332019bf9816adba0f1 261 Pfam PF00005 ABC transporter 20 164 2.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_00470 143b92f8d55ca332019bf9816adba0f1 261 SUPERFAMILY SSF52540 4 229 8.79E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00470 143b92f8d55ca332019bf9816adba0f1 261 SMART SM00382 28 234 4.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_09405 b8322bd62e49d752526ff2f880c8486d 127 SUPERFAMILY SSF90123 7 113 1.96E-6 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_05480 db549ef60bc028827617fd863c67245c 253 SUPERFAMILY SSF53335 10 189 3.84E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_05480 db549ef60bc028827617fd863c67245c 253 Pfam PF08241 Methyltransferase domain 56 142 5.9E-6 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JO40_05480 db549ef60bc028827617fd863c67245c 253 Gene3D G3DSA:3.40.50.150 28 207 7.8E-13 T 14-10-2018 JO40_12335 148a2751ac2ade71212237c478128df7 597 SUPERFAMILY SSF55486 53 592 9.38E-86 T 14-10-2018 JO40_12335 148a2751ac2ade71212237c478128df7 597 Gene3D G3DSA:1.20.140.70 18 174 4.5E-10 T 14-10-2018 JO40_12335 148a2751ac2ade71212237c478128df7 597 Pfam PF01432 Peptidase family M3 197 577 1.1E-27 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JO40_12335 148a2751ac2ade71212237c478128df7 597 Pfam PF08439 Oligopeptidase F 116 175 1.8E-10 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain JO40_12335 148a2751ac2ade71212237c478128df7 597 Gene3D G3DSA:1.10.1370.20 222 597 5.3E-121 T 14-10-2018 JO40_12335 148a2751ac2ade71212237c478128df7 597 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 8 590 8.3E-219 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 JO40_06375 c9eb152943cf5246d367a58bd847d755 699 SMART SM00044 402 608 4.7E-12 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_06375 c9eb152943cf5246d367a58bd847d755 699 Pfam PF05226 CHASE2 domain 17 336 1.3E-45 T 14-10-2018 IPR007890 CHASE2 JO40_06375 c9eb152943cf5246d367a58bd847d755 699 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 441 619 5.2E-27 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO40_06375 c9eb152943cf5246d367a58bd847d755 699 SUPERFAMILY SSF55073 436 629 2.51E-51 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_06375 c9eb152943cf5246d367a58bd847d755 699 Gene3D G3DSA:3.30.70.1230 435 633 3.9E-61 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_06375 c9eb152943cf5246d367a58bd847d755 699 SMART SM01080 27 339 2.1E-60 T 14-10-2018 IPR007890 CHASE2 JO40_07085 e89813910c88255116e88c0ff0d3ddec 388 SUPERFAMILY SSF56796 3 386 1.83E-100 T 14-10-2018 JO40_07085 e89813910c88255116e88c0ff0d3ddec 388 Gene3D G3DSA:3.40.50.1970 2 188 2.1E-51 T 14-10-2018 JO40_07085 e89813910c88255116e88c0ff0d3ddec 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 365 1.3E-88 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JO40_07085 e89813910c88255116e88c0ff0d3ddec 388 Gene3D G3DSA:1.20.1090.10 189 387 4.2E-38 T 14-10-2018 JO40_05710 a9b8e25f23472080f586251927cf7a4e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_05710 a9b8e25f23472080f586251927cf7a4e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_05710 a9b8e25f23472080f586251927cf7a4e 205 SUPERFAMILY SSF46689 3 76 2.77E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_05710 a9b8e25f23472080f586251927cf7a4e 205 Gene3D G3DSA:1.10.357.10 2 203 3.1E-24 T 14-10-2018 JO40_05710 a9b8e25f23472080f586251927cf7a4e 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_08060 ca249af3c7c55cd39f86aac86fd4fefb 207 Pfam PF13649 Methyltransferase domain 41 125 1.2E-8 T 14-10-2018 JO40_08060 ca249af3c7c55cd39f86aac86fd4fefb 207 SUPERFAMILY SSF53335 3 189 1.28E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_08060 ca249af3c7c55cd39f86aac86fd4fefb 207 Gene3D G3DSA:3.40.50.150 1 200 5.8E-31 T 14-10-2018 JO40_12055 8c8e83165506bef937a2a6100d67ba34 231 Pfam PF04773 FecR protein 55 136 8.7E-11 T 14-10-2018 IPR006860 FecR protein JO40_08660 bb737a2e0d5a14389110cf778d8beed9 409 SUPERFAMILY SSF118215 4 395 3.14E-41 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO40_08660 bb737a2e0d5a14389110cf778d8beed9 409 Gene3D G3DSA:1.10.3860.10 1 406 2.6E-36 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO40_08660 bb737a2e0d5a14389110cf778d8beed9 409 Pfam PF00375 Sodium:dicarboxylate symporter family 4 395 1.5E-32 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JO40_00410 e92a9be0d1135d7289613ba0a72e3a9e 139 PIRSF PIRSF016789 4 126 3.3E-31 T 14-10-2018 IPR007401 Protein of unknown function DUF454 JO40_00410 e92a9be0d1135d7289613ba0a72e3a9e 139 Pfam PF04304 Protein of unknown function (DUF454) 6 120 8.7E-36 T 14-10-2018 IPR007401 Protein of unknown function DUF454 JO40_02165 28f818c14c7633b3dbf1dd851a2884d5 94 Gene3D G3DSA:3.30.70.100 6 94 4.1E-27 T 14-10-2018 JO40_02165 28f818c14c7633b3dbf1dd851a2884d5 94 SUPERFAMILY SSF54975 5 92 2.62E-26 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JO40_02165 28f818c14c7633b3dbf1dd851a2884d5 94 Pfam PF00708 Acylphosphatase 10 92 6.0E-25 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JO40_02165 28f818c14c7633b3dbf1dd851a2884d5 94 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JO40_00910 6689f163c559b658d992939d8a76a88a 210 Pfam PF00633 Helix-hairpin-helix motif 103 130 5.9E-10 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 SMART SM00525 189 209 4.0E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 Gene3D G3DSA:1.10.340.30 24 135 6.2E-73 T 14-10-2018 JO40_00910 6689f163c559b658d992939d8a76a88a 210 SUPERFAMILY SSF48150 6 207 1.29E-66 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 SMART SM00478 41 188 3.6E-56 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 9.9E-7 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 SMART SM00278 112 131 0.0071 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JO40_00910 6689f163c559b658d992939d8a76a88a 210 Gene3D G3DSA:1.10.1670.10 14 206 6.2E-73 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 Hamap MF_00942 Endonuclease III [nth]. 3 210 35.513 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JO40_00910 6689f163c559b658d992939d8a76a88a 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 171 3.1E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JO40_00910 6689f163c559b658d992939d8a76a88a 210 PIRSF PIRSF001435 1 209 5.5E-50 T 14-10-2018 JO40_00910 6689f163c559b658d992939d8a76a88a 210 TIGRFAM TIGR01083 nth: endonuclease III 8 197 5.1E-80 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JO40_03985 821bdd6166ae05fdfcd2fc08ff7fbcdc 338 PIRSF PIRSF002825 1 334 9.4E-79 T 14-10-2018 IPR026045 Ferric binding protein JO40_03985 821bdd6166ae05fdfcd2fc08ff7fbcdc 338 SUPERFAMILY SSF53850 41 330 7.72E-67 T 14-10-2018 JO40_03985 821bdd6166ae05fdfcd2fc08ff7fbcdc 338 Pfam PF13343 Bacterial extracellular solute-binding protein 79 289 5.6E-35 T 14-10-2018 JO40_03985 821bdd6166ae05fdfcd2fc08ff7fbcdc 338 Gene3D G3DSA:3.40.190.10 132 317 1.1E-83 T 14-10-2018 JO40_03985 821bdd6166ae05fdfcd2fc08ff7fbcdc 338 Gene3D G3DSA:3.40.190.10 42 304 1.1E-83 T 14-10-2018 JO40_02385 4b3a45c85b71553337bc60834c1031bf 200 SUPERFAMILY SSF51182 1 151 6.58E-29 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO40_02385 4b3a45c85b71553337bc60834c1031bf 200 Gene3D G3DSA:2.60.120.10 7 165 5.0E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_02385 4b3a45c85b71553337bc60834c1031bf 200 Gene3D G3DSA:2.60.120.10 12 112 5.0E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_02385 4b3a45c85b71553337bc60834c1031bf 200 Pfam PF05962 HutD 9 176 1.8E-27 T 14-10-2018 IPR010282 Uncharacterised protein family HutD/Ves JO40_07280 68e807f94b262d00d6a8b708bc4b5fca 173 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 5 167 14.097 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO40_07280 68e807f94b262d00d6a8b708bc4b5fca 173 TIGRFAM TIGR00077 lspA: signal peptidase II 7 169 1.4E-30 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO40_07280 68e807f94b262d00d6a8b708bc4b5fca 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.1E-9 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO40_07280 68e807f94b262d00d6a8b708bc4b5fca 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 3.1E-9 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO40_07280 68e807f94b262d00d6a8b708bc4b5fca 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 3.1E-9 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO40_07280 68e807f94b262d00d6a8b708bc4b5fca 173 Pfam PF01252 Signal peptidase (SPase) II 14 159 5.1E-30 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO40_07280 68e807f94b262d00d6a8b708bc4b5fca 173 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO40_05735 a49f2974207591c13c02cee931b18221 292 Gene3D G3DSA:3.40.50.1220 11 199 1.1E-11 T 14-10-2018 JO40_05735 a49f2974207591c13c02cee931b18221 292 SUPERFAMILY SSF52467 2 290 2.8E-40 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO40_05735 a49f2974207591c13c02cee931b18221 292 Gene3D G3DSA:3.30.1600.10 32 190 1.1E-11 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily JO40_10425 22d86855e1cfb443c915c3c80cb5a778 317 SUPERFAMILY SSF103481 204 301 6.54E-12 T 14-10-2018 JO40_10425 22d86855e1cfb443c915c3c80cb5a778 317 Pfam PF00892 EamA-like transporter family 168 301 2.1E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_10425 22d86855e1cfb443c915c3c80cb5a778 317 Pfam PF00892 EamA-like transporter family 25 154 5.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_10425 22d86855e1cfb443c915c3c80cb5a778 317 SUPERFAMILY SSF103481 57 157 4.18E-8 T 14-10-2018 JO40_11365 5b722c1227fb58864fe4810b85e3e530 363 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 14 363 27.136 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 JO40_11365 5b722c1227fb58864fe4810b85e3e530 363 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 21 358 9.3E-67 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 JO40_11365 5b722c1227fb58864fe4810b85e3e530 363 SUPERFAMILY SSF111342 4 291 6.54E-79 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 JO40_11365 5b722c1227fb58864fe4810b85e3e530 363 Gene3D G3DSA:3.30.2110.10 16 187 2.9E-47 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 JO40_11365 5b722c1227fb58864fe4810b85e3e530 363 PIRSF PIRSF026782 10 363 8.6E-120 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 JO40_11365 5b722c1227fb58864fe4810b85e3e530 363 Pfam PF01888 CbiD 14 273 3.3E-87 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 JO40_06305 40e2b1e1ae5547047f585e0a26e194e8 411 SUPERFAMILY SSF55031 206 320 6.28E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO40_06305 40e2b1e1ae5547047f585e0a26e194e8 411 Gene3D G3DSA:3.40.630.10 27 394 5.3E-72 T 14-10-2018 JO40_06305 40e2b1e1ae5547047f585e0a26e194e8 411 Gene3D G3DSA:3.30.70.360 205 327 5.3E-72 T 14-10-2018 JO40_06305 40e2b1e1ae5547047f585e0a26e194e8 411 SUPERFAMILY SSF53187 4 406 3.14E-53 T 14-10-2018 JO40_06305 40e2b1e1ae5547047f585e0a26e194e8 411 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 24 400 3.4E-78 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase JO40_06305 40e2b1e1ae5547047f585e0a26e194e8 411 Pfam PF01546 Peptidase family M20/M25/M40 92 405 7.5E-30 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO40_06305 40e2b1e1ae5547047f585e0a26e194e8 411 Pfam PF07687 Peptidase dimerisation domain 201 311 5.3E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO40_05185 a855e866c57256a746428f93a16751d7 378 Gene3D G3DSA:2.40.30.170 51 364 3.1E-21 T 14-10-2018 JO40_05185 a855e866c57256a746428f93a16751d7 378 Gene3D G3DSA:1.10.287.470 97 237 3.1E-21 T 14-10-2018 JO40_05185 a855e866c57256a746428f93a16751d7 378 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 331 3.5E-14 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_05185 a855e866c57256a746428f93a16751d7 378 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 3.5E-14 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_05185 a855e866c57256a746428f93a16751d7 378 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 378 3.5E-14 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_05185 a855e866c57256a746428f93a16751d7 378 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 3.5E-14 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_05185 a855e866c57256a746428f93a16751d7 378 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 351 366 3.5E-14 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_05185 a855e866c57256a746428f93a16751d7 378 Pfam PF13437 HlyD family secretion protein 237 346 2.2E-12 T 14-10-2018 JO40_05185 a855e866c57256a746428f93a16751d7 378 Gene3D G3DSA:2.40.50.100 62 275 3.1E-21 T 14-10-2018 JO40_12825 caf4c8ab274a707170095e49badf578f 226 Pfam PF00005 ABC transporter 26 173 3.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_12825 caf4c8ab274a707170095e49badf578f 226 SUPERFAMILY SSF52540 6 225 2.73E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_12825 caf4c8ab274a707170095e49badf578f 226 SMART SM00382 34 224 1.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_12825 caf4c8ab274a707170095e49badf578f 226 Gene3D G3DSA:3.40.50.300 4 226 2.1E-57 T 14-10-2018 JO40_12825 caf4c8ab274a707170095e49badf578f 226 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_07190 7187f9d8fcfda7cd57b1f60919eb1d04 107 Pfam PF12844 Helix-turn-helix domain 12 69 2.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_07190 7187f9d8fcfda7cd57b1f60919eb1d04 107 Gene3D G3DSA:1.10.260.40 2 71 6.6E-19 T 14-10-2018 JO40_07190 7187f9d8fcfda7cd57b1f60919eb1d04 107 SMART SM00530 13 68 1.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_07190 7187f9d8fcfda7cd57b1f60919eb1d04 107 SUPERFAMILY SSF47413 8 72 8.85E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_11715 1444f501f5ce1def91f77e301914a4f9 425 Pfam PF02687 FtsX-like permease family 329 409 7.1E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_11715 1444f501f5ce1def91f77e301914a4f9 425 Pfam PF12704 MacB-like periplasmic core domain 19 231 1.4E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO40_02515 377d3922f218d9343650047b171c55c9 233 Gene3D G3DSA:2.60.450.10 25 145 1.9E-8 T 14-10-2018 JO40_02515 377d3922f218d9343650047b171c55c9 233 Pfam PF03968 OstA-like protein 39 138 1.6E-7 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal JO40_04425 90f70292036c41741d8ef4a85cc95adb 194 Pfam PF12672 Protein of unknown function (DUF3793) 11 191 2.2E-49 T 14-10-2018 IPR024523 Protein of unknown function DUF3793 JO40_06710 970d80e7ead827682603e0481dd68e87 386 Pfam PF02926 THUMP domain 36 158 1.7E-18 T 14-10-2018 IPR004114 THUMP domain GO:0003723 JO40_06710 970d80e7ead827682603e0481dd68e87 386 Gene3D G3DSA:3.30.2130.30 2 171 5.5E-39 T 14-10-2018 JO40_06710 970d80e7ead827682603e0481dd68e87 386 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 367 5.7E-100 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 JO40_06710 970d80e7ead827682603e0481dd68e87 386 SUPERFAMILY SSF52402 174 372 7.68E-38 T 14-10-2018 JO40_06710 970d80e7ead827682603e0481dd68e87 386 Gene3D G3DSA:3.40.50.620 172 386 1.4E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_06710 970d80e7ead827682603e0481dd68e87 386 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 172 361 2.1E-69 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 JO40_06710 970d80e7ead827682603e0481dd68e87 386 SMART SM00981 70 162 2.2E-18 T 14-10-2018 IPR004114 THUMP domain GO:0003723 JO40_06710 970d80e7ead827682603e0481dd68e87 386 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 386 117.385 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 JO40_06710 970d80e7ead827682603e0481dd68e87 386 SUPERFAMILY SSF143437 4 170 1.27E-32 T 14-10-2018 JO40_09115 7f1c671c40bf172195f4ce8606707932 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 59.758 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_09115 7f1c671c40bf172195f4ce8606707932 250 Pfam PF00121 Triosephosphate isomerase 5 245 1.5E-92 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_09115 7f1c671c40bf172195f4ce8606707932 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_09115 7f1c671c40bf172195f4ce8606707932 250 SUPERFAMILY SSF51351 2 245 1.31E-87 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_09115 7f1c671c40bf172195f4ce8606707932 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 240 2.6E-53 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_09115 7f1c671c40bf172195f4ce8606707932 250 Gene3D G3DSA:3.20.20.70 1 248 1.6E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_03270 98089f2a491954449ac951ab0813152e 76 Pfam PF04024 PspC domain 3 59 2.7E-23 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal JO40_11200 98209e0bdbc2178e5d35ab69cdd78737 880 Pfam PF13489 Methyltransferase domain 659 821 6.8E-17 T 14-10-2018 JO40_11200 98209e0bdbc2178e5d35ab69cdd78737 880 SUPERFAMILY SSF53448 9 215 1.33E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_11200 98209e0bdbc2178e5d35ab69cdd78737 880 Gene3D G3DSA:3.90.550.10 8 220 6.8E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_11200 98209e0bdbc2178e5d35ab69cdd78737 880 Gene3D G3DSA:3.40.50.2000 388 508 1.6E-6 T 14-10-2018 JO40_11200 98209e0bdbc2178e5d35ab69cdd78737 880 SUPERFAMILY SSF53335 656 862 4.18E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_11200 98209e0bdbc2178e5d35ab69cdd78737 880 Pfam PF02348 Cytidylyltransferase 9 213 8.7E-30 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 JO40_11200 98209e0bdbc2178e5d35ab69cdd78737 880 Gene3D G3DSA:3.40.50.150 610 874 2.3E-28 T 14-10-2018 JO40_03545 69846555a62a97789d6acb57c0641e4d 139 Gene3D G3DSA:1.10.60.10 77 134 2.4E-18 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JO40_03545 69846555a62a97789d6acb57c0641e4d 139 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 72 130 2.2E-17 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 JO40_03545 69846555a62a97789d6acb57c0641e4d 139 SMART SM00529 33 133 1.9E-27 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 JO40_03545 69846555a62a97789d6acb57c0641e4d 139 SUPERFAMILY SSF47979 72 129 3.79E-16 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JO40_03545 69846555a62a97789d6acb57c0641e4d 139 Gene3D G3DSA:1.10.10.10 12 76 9.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_03545 69846555a62a97789d6acb57c0641e4d 139 SUPERFAMILY SSF46785 11 71 2.46E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_03545 69846555a62a97789d6acb57c0641e4d 139 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 11 67 7.3E-14 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 JO40_05860 b5ffbcff9be171471e7457e40dc8fb78 463 Pfam PF00460 Flagella basal body rod protein 8 35 2.6E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO40_05860 b5ffbcff9be171471e7457e40dc8fb78 463 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 443 9.7E-89 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO40_05860 b5ffbcff9be171471e7457e40dc8fb78 463 Gene3D G3DSA:2.60.98.20 168 344 9.4E-11 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily JO40_05860 b5ffbcff9be171471e7457e40dc8fb78 463 Pfam PF07559 Flagellar basal body protein FlaE 199 343 1.6E-17 T 14-10-2018 IPR011491 Flagellar hook protein FlgE JO40_05860 b5ffbcff9be171471e7457e40dc8fb78 463 SUPERFAMILY SSF117143 91 423 7.06E-72 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JO40_05860 b5ffbcff9be171471e7457e40dc8fb78 463 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 384 461 2.8E-18 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO40_05860 b5ffbcff9be171471e7457e40dc8fb78 463 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO40_01995 416b3460d02a12fe47dc6a551a04fdec 725 Gene3D G3DSA:2.160.10.10 213 423 1.4E-6 T 14-10-2018 JO40_01995 416b3460d02a12fe47dc6a551a04fdec 725 Pfam PF16314 Domain of unknown function (DUF4954) 43 715 2.3E-139 T 14-10-2018 IPR032533 Protein of unknown function DUF4954 JO40_01995 416b3460d02a12fe47dc6a551a04fdec 725 SUPERFAMILY SSF51161 270 397 4.01E-5 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JO40_03070 c6545aec6eeda8b21758e944625ab1a7 221 Pfam PF14094 Domain of unknown function (DUF4272) 8 217 2.0E-67 T 14-10-2018 IPR025368 Protein of unknown function DUF4272 JO40_01655 cfaee42052dfc842aae9f070d57466f8 472 SUPERFAMILY SSF53686 1 470 4.24E-88 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JO40_01655 cfaee42052dfc842aae9f070d57466f8 472 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 100 371 8.5E-11 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JO40_01655 cfaee42052dfc842aae9f070d57466f8 472 Gene3D G3DSA:3.90.1380.10 1 82 2.2E-12 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily JO40_01655 cfaee42052dfc842aae9f070d57466f8 472 Pfam PF14821 Threonine synthase N terminus 8 81 2.7E-11 T 14-10-2018 IPR029144 Threonine synthase, N-terminal JO40_00500 2a7304fe23197f8666c329529fdf9455 133 Pfam PF01850 PIN domain 2 123 5.0E-16 T 14-10-2018 IPR002716 PIN domain JO40_00500 2a7304fe23197f8666c329529fdf9455 133 Gene3D G3DSA:3.40.50.1010 1 131 5.4E-35 T 14-10-2018 JO40_00500 2a7304fe23197f8666c329529fdf9455 133 SUPERFAMILY SSF88723 1 132 1.88E-37 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_00885 19cdad240f2c51f428de73fa573b21cb 274 Gene3D G3DSA:1.10.3720.10 74 274 1.5E-30 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00885 19cdad240f2c51f428de73fa573b21cb 274 SUPERFAMILY SSF161098 77 262 3.27E-28 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00885 19cdad240f2c51f428de73fa573b21cb 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 260 1.5E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 SUPERFAMILY SSF56420 2 155 3.27E-54 T 14-10-2018 IPR036821 Peptide deformylase superfamily JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 Pfam PF01327 Polypeptide deformylase 2 147 3.7E-50 T 14-10-2018 IPR023635 Peptide deformylase JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 PRINTS PR01576 Peptide deformylase signature 96 114 7.4E-35 T 14-10-2018 IPR023635 Peptide deformylase JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 PRINTS PR01576 Peptide deformylase signature 30 59 7.4E-35 T 14-10-2018 IPR023635 Peptide deformylase JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 PRINTS PR01576 Peptide deformylase signature 84 95 7.4E-35 T 14-10-2018 IPR023635 Peptide deformylase JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 PRINTS PR01576 Peptide deformylase signature 115 144 7.4E-35 T 14-10-2018 IPR023635 Peptide deformylase JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 Hamap MF_00163 Peptide deformylase [def]. 2 157 28.088 T 14-10-2018 IPR023635 Peptide deformylase JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 2 149 2.4E-53 T 14-10-2018 IPR023635 Peptide deformylase JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 Gene3D G3DSA:3.90.45.10 1 168 1.7E-59 T 14-10-2018 IPR036821 Peptide deformylase superfamily JO40_11540 ab389d342d136aecdbe6cd1eb4b3feea 169 PIRSF PIRSF004749 1 166 5.0E-52 T 14-10-2018 IPR023635 Peptide deformylase JO40_07365 aa01ebfbf8605f210bf6fa2b384324cd 400 SUPERFAMILY SSF56112 9 395 2.67E-66 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JO40_07365 aa01ebfbf8605f210bf6fa2b384324cd 400 Gene3D G3DSA:3.90.1200.10 118 399 2.9E-72 T 14-10-2018 JO40_07365 aa01ebfbf8605f210bf6fa2b384324cd 400 Pfam PF01636 Phosphotransferase enzyme family 203 275 5.4E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase JO40_07365 aa01ebfbf8605f210bf6fa2b384324cd 400 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 400 129.158 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 JO40_07365 aa01ebfbf8605f210bf6fa2b384324cd 400 Gene3D G3DSA:3.30.200.20 2 115 1.6E-33 T 14-10-2018 JO40_07365 aa01ebfbf8605f210bf6fa2b384324cd 400 PIRSF PIRSF031134 1 399 3.3E-139 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 JO40_00630 77c124fdc0304970163a04f60178ecb5 139 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 138 39.052 T 14-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 JO40_00630 77c124fdc0304970163a04f60178ecb5 139 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 3 135 1.1E-17 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JO40_00630 77c124fdc0304970163a04f60178ecb5 139 Gene3D G3DSA:3.40.50.280 1 138 1.2E-41 T 14-10-2018 JO40_00630 77c124fdc0304970163a04f60178ecb5 139 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 6 134 1.7E-62 T 14-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 JO40_00630 77c124fdc0304970163a04f60178ecb5 139 SUPERFAMILY SSF52242 3 134 4.45E-36 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 JO40_00630 77c124fdc0304970163a04f60178ecb5 139 Pfam PF02310 B12 binding domain 6 96 1.0E-15 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 JO40_08255 c3bdf38261f8774c9de08baa9681066d 294 Gene3D G3DSA:3.40.1130.10 39 221 1.1E-10 T 14-10-2018 JO40_08255 c3bdf38261f8774c9de08baa9681066d 294 SUPERFAMILY SSF69593 2 269 5.89E-38 T 14-10-2018 JO40_08255 c3bdf38261f8774c9de08baa9681066d 294 Pfam PF01553 Acyltransferase 67 197 1.9E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO40_08255 c3bdf38261f8774c9de08baa9681066d 294 SMART SM00563 76 220 1.6E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO40_11465 9d41c81f5585dfd5d20c2e0002411dfb 621 SUPERFAMILY SSF53335 89 448 2.27E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_11465 9d41c81f5585dfd5d20c2e0002411dfb 621 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 412 426 8.2E-14 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JO40_11465 9d41c81f5585dfd5d20c2e0002411dfb 621 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 119 131 8.2E-14 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JO40_11465 9d41c81f5585dfd5d20c2e0002411dfb 621 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 389 411 8.2E-14 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JO40_11465 9d41c81f5585dfd5d20c2e0002411dfb 621 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 185 204 8.2E-14 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JO40_11465 9d41c81f5585dfd5d20c2e0002411dfb 621 Pfam PF01555 DNA methylase 119 449 2.4E-41 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JO40_11465 9d41c81f5585dfd5d20c2e0002411dfb 621 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 SUPERFAMILY SSF54713 141 277 1.07E-29 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 Gene3D G3DSA:1.10.286.20 192 236 8.4E-38 T 14-10-2018 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 SUPERFAMILY SSF46934 1 55 3.49E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 Gene3D G3DSA:1.10.8.10 1 55 1.3E-21 T 14-10-2018 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 Gene3D G3DSA:3.30.479.20 56 137 1.3E-17 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 Pfam PF00889 Elongation factor TS 70 277 2.8E-50 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 Gene3D G3DSA:3.30.479.20 143 277 8.4E-38 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 49.119 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 SUPERFAMILY SSF54713 56 134 1.03E-14 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 277 1.0E-70 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_00075 3be5b43a19c5bf8c04b5d04eee9e3846 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO40_02000 47deb7eb191d954a2535b24115f1e1a3 228 Pfam PF03692 Putative zinc- or iron-chelating domain 41 129 1.1E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 Pfam PF07687 Peptidase dimerisation domain 208 281 4.1E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 Gene3D G3DSA:3.40.630.10 358 481 7.2E-25 T 14-10-2018 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 447 469 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 249 268 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 204 221 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 360 378 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PRINTS PR00934 X-His dipeptidase (M25) signature 425 441 2.1E-53 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 Gene3D G3DSA:3.40.630.10 2 227 4.0E-57 T 14-10-2018 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 SUPERFAMILY SSF53187 10 479 1.61E-59 T 14-10-2018 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 PIRSF PIRSF016599 1 481 4.9E-189 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 479 2.4E-176 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO40_08235 37f04793db5f08ef3e39a94672e5a675 481 Pfam PF01546 Peptidase family M20/M25/M40 73 477 1.0E-22 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 ProSitePatterns PS00211 ABC transporters family signature. 266 280 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 SUPERFAMILY SSF50331 456 542 4.08E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 Gene3D G3DSA:2.40.50.940 355 387 4.9E-9 T 14-10-2018 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 SUPERFAMILY SSF52540 2 366 3.12E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 Pfam PF00005 ABC transporter 20 293 4.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 Gene3D G3DSA:2.40.50.140 469 527 1.3E-9 T 14-10-2018 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 Gene3D G3DSA:2.40.50.100 460 535 1.3E-9 T 14-10-2018 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 Gene3D G3DSA:3.40.50.300 2 154 1.2E-27 T 14-10-2018 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 Gene3D G3DSA:3.40.50.300 156 354 4.3E-28 T 14-10-2018 JO40_04675 3300a4767648a5d087e220a40c4a15eb 549 SMART SM00382 28 343 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02430 ff0172277f81575d1d46807e51923e56 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 257 7.7E-61 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JO40_02430 ff0172277f81575d1d46807e51923e56 261 Gene3D G3DSA:2.50.20.10 24 258 9.3E-70 T 14-10-2018 JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 8 525 9.3E-123 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PRINTS PR01806 Virulence factor MviN signature 58 74 8.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PRINTS PR01806 Virulence factor MviN signature 272 298 8.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PRINTS PR01806 Virulence factor MviN signature 422 439 8.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PRINTS PR01806 Virulence factor MviN signature 167 188 8.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PRINTS PR01806 Virulence factor MviN signature 143 167 8.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PRINTS PR01806 Virulence factor MviN signature 39 58 8.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PRINTS PR01806 Virulence factor MviN signature 370 389 8.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 Pfam PF03023 MviN-like protein 34 478 3.9E-111 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 9 477 17.12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04130 fe57a2ca8700ba63166b7131dda7efc8 532 PIRSF PIRSF002869 4 531 1.5E-162 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO40_04780 507a13e27e9668217f512cd04161493b 73 Pfam PF08972 Domain of unknown function (DUF1902) 3 71 2.5E-30 T 14-10-2018 IPR015066 Domain of unknown function DUF1902 JO40_04780 507a13e27e9668217f512cd04161493b 73 SUPERFAMILY SSF143100 1 64 5.1E-14 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO40_04780 507a13e27e9668217f512cd04161493b 73 Gene3D G3DSA:3.30.2390.10 1 72 1.8E-21 T 14-10-2018 JO40_08630 9cdc1ef442f222fd5a913ab47a123cb0 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 110 24.453 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO40_08630 9cdc1ef442f222fd5a913ab47a123cb0 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 113 9.9E-31 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO40_08630 9cdc1ef442f222fd5a913ab47a123cb0 133 SUPERFAMILY SSF89919 1 112 1.96E-28 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily JO40_08630 9cdc1ef442f222fd5a913ab47a123cb0 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 1.0E-45 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO40_08630 9cdc1ef442f222fd5a913ab47a123cb0 133 Pfam PF02033 Ribosome-binding factor A 5 106 9.9E-28 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO40_08630 9cdc1ef442f222fd5a913ab47a123cb0 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 JO40_08630 9cdc1ef442f222fd5a913ab47a123cb0 133 Gene3D G3DSA:3.30.300.20 1 105 3.5E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO40_08625 1a8f0479ee1fb5cf657edb29b94766b9 345 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 27 193 3.5E-40 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 JO40_08625 1a8f0479ee1fb5cf657edb29b94766b9 345 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 7 230 6.8E-66 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08625 1a8f0479ee1fb5cf657edb29b94766b9 345 Gene3D G3DSA:3.30.2350.10 2 259 2.8E-70 T 14-10-2018 JO40_08625 1a8f0479ee1fb5cf657edb29b94766b9 345 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 5 343 15.43 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08625 1a8f0479ee1fb5cf657edb29b94766b9 345 SUPERFAMILY SSF55120 5 235 9.5E-58 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_08625 1a8f0479ee1fb5cf657edb29b94766b9 345 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 194 234 2.1E-7 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 JO40_09525 f094df94e519687eda92c85fb16b66a4 123 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 6 105 1.9E-13 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system JO40_09525 f094df94e519687eda92c85fb16b66a4 123 Gene3D G3DSA:3.30.160.250 5 82 1.9E-16 T 14-10-2018 JO40_09525 f094df94e519687eda92c85fb16b66a4 123 SUPERFAMILY SSF143100 4 62 6.54E-15 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO40_07630 632271034bae53ab3477dacd5178f5a3 93 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 82 3.5E-24 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system JO40_07630 632271034bae53ab3477dacd5178f5a3 93 Gene3D G3DSA:3.10.450.530 1 84 3.5E-18 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily JO40_05325 02281f866e55862ec1d5115c3f623cd3 93 SUPERFAMILY SSF101498 12 89 6.28E-7 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily JO40_05325 02281f866e55862ec1d5115c3f623cd3 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 31 89 3.8E-11 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal JO40_05530 178d41240f9d1a0854b2d8efe0cd58b7 106 Pfam PF04993 TfoX N-terminal domain 13 73 5.3E-9 T 14-10-2018 IPR007076 TfoX, N-terminal JO40_05530 178d41240f9d1a0854b2d8efe0cd58b7 106 SUPERFAMILY SSF159894 6 97 4.97E-15 T 14-10-2018 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 Pfam PF13394 4Fe-4S single cluster domain 112 209 1.2E-5 T 14-10-2018 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 SUPERFAMILY SSF102114 102 303 4.32E-14 T 14-10-2018 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 PIRSF PIRSF006004 4 345 1.6E-113 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 7 343 61.151 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 Pfam PF04055 Radical SAM superfamily 109 267 3.4E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 6 339 6.1E-100 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 Gene3D G3DSA:3.20.20.70 67 328 1.7E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_07760 bb69efb74633560d7193eae6b4efc6d3 345 Gene3D G3DSA:1.10.150.530 1 64 2.4E-10 T 14-10-2018 JO40_04660 e9ac42596d87d9a7bfaa3c6e3f68ff64 255 PIRSF PIRSF017388 9 255 1.6E-64 T 14-10-2018 IPR012354 Esterase/lipase GO:0052689 JO40_04660 e9ac42596d87d9a7bfaa3c6e3f68ff64 255 Pfam PF12146 Serine aminopeptidase, S33 26 156 8.4E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JO40_04660 e9ac42596d87d9a7bfaa3c6e3f68ff64 255 Gene3D G3DSA:3.40.50.1820 11 255 6.0E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_04660 e9ac42596d87d9a7bfaa3c6e3f68ff64 255 SUPERFAMILY SSF53474 17 254 7.9E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_11245 97cc59c870613b04ffcc219f0a8ab644 95 PIRSF PIRSF004555 1 95 9.2E-30 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO40_11245 97cc59c870613b04ffcc219f0a8ab644 95 Gene3D G3DSA:3.30.1310.10 1 95 3.8E-26 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JO40_11245 97cc59c870613b04ffcc219f0a8ab644 95 SUPERFAMILY SSF82607 1 88 6.54E-24 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JO40_11245 97cc59c870613b04ffcc219f0a8ab644 95 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 89 16.241 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO40_11245 97cc59c870613b04ffcc219f0a8ab644 95 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 83 4.1E-22 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO40_11245 97cc59c870613b04ffcc219f0a8ab644 95 Pfam PF02575 YbaB/EbfC DNA-binding family 1 88 4.1E-26 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO40_06775 6322baffbe111ace0b24946067f9d625 139 SUPERFAMILY SSF88723 1 132 1.28E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_06775 6322baffbe111ace0b24946067f9d625 139 Gene3D G3DSA:3.40.50.1010 1 138 1.4E-7 T 14-10-2018 JO40_06775 6322baffbe111ace0b24946067f9d625 139 Pfam PF01850 PIN domain 4 115 5.9E-7 T 14-10-2018 IPR002716 PIN domain JO40_01990 27cbbef933433f9558110e108db8e366 224 SUPERFAMILY SSF51219 1 222 2.33E-70 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily JO40_01990 27cbbef933433f9558110e108db8e366 224 Pfam PF01987 Mitochondrial biogenesis AIM24 3 207 4.6E-63 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 JO40_01990 27cbbef933433f9558110e108db8e366 224 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 1 220 1.7E-34 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 JO40_01990 27cbbef933433f9558110e108db8e366 224 Gene3D G3DSA:3.60.160.10 1 223 3.1E-76 T 14-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily JO40_09350 8049732290935b3c4abe083e83fd5a7f 110 SUPERFAMILY SSF46785 8 102 8.49E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_09350 8049732290935b3c4abe083e83fd5a7f 110 Pfam PF01638 HxlR-like helix-turn-helix 18 106 1.8E-26 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type JO40_09350 8049732290935b3c4abe083e83fd5a7f 110 Gene3D G3DSA:1.10.10.10 2 109 1.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_04395 df292677033e30191bb01fa49fb12f93 383 SUPERFAMILY SSF56300 1 308 1.18E-42 T 14-10-2018 JO40_04395 df292677033e30191bb01fa49fb12f93 383 Gene3D G3DSA:3.60.21.10 1 267 6.1E-66 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO40_04395 df292677033e30191bb01fa49fb12f93 383 Pfam PF00149 Calcineurin-like phosphoesterase 1 181 3.6E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JO40_04395 df292677033e30191bb01fa49fb12f93 383 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 1.4E-60 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 JO40_04820 30b360f1832dc9b16e9a04b7de58b516 131 SUPERFAMILY SSF88723 1 130 5.61E-35 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_04820 30b360f1832dc9b16e9a04b7de58b516 131 Gene3D G3DSA:3.40.50.1010 1 131 3.2E-37 T 14-10-2018 JO40_04820 30b360f1832dc9b16e9a04b7de58b516 131 Pfam PF01850 PIN domain 2 123 4.3E-16 T 14-10-2018 IPR002716 PIN domain JO40_02190 5076f7f38202aac46b8b5edba830324e 179 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.253 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02190 5076f7f38202aac46b8b5edba830324e 179 Gene3D G3DSA:3.90.1030.10 1 116 2.5E-44 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02190 5076f7f38202aac46b8b5edba830324e 179 Pfam PF01196 Ribosomal protein L17 20 116 8.9E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02190 5076f7f38202aac46b8b5edba830324e 179 SUPERFAMILY SSF64263 1 119 4.45E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02190 5076f7f38202aac46b8b5edba830324e 179 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 9.4E-46 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00385 39c36bc2f0d08398a5a19aa80705bb83 227 SUPERFAMILY SSF52540 12 191 1.38E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00385 39c36bc2f0d08398a5a19aa80705bb83 227 Gene3D G3DSA:3.40.50.300 9 211 1.4E-16 T 14-10-2018 JO40_11945 3d86f80f7928c9841636b4601a36fd41 653 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 378 634 2.8E-53 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 JO40_11945 3d86f80f7928c9841636b4601a36fd41 653 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 14 105 2.4E-13 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 JO40_02025 09bf74f941c9c720b8a48efbba0fae6e 129 SUPERFAMILY SSF54211 6 129 1.37E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO40_02025 09bf74f941c9c720b8a48efbba0fae6e 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 129 28.868 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid JO40_02025 09bf74f941c9c720b8a48efbba0fae6e 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 2.7E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 JO40_02025 09bf74f941c9c720b8a48efbba0fae6e 129 Gene3D G3DSA:3.30.230.10 2 129 4.0E-48 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO40_02025 09bf74f941c9c720b8a48efbba0fae6e 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 223 4.9E-94 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 Pfam PF00687 Ribosomal protein L1p/L10e family 31 216 5.5E-49 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 Gene3D G3DSA:3.40.50.790 64 155 1.5E-74 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 225 37.045 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 Gene3D G3DSA:3.30.190.20 20 220 1.5E-74 T 14-10-2018 JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 PIRSF PIRSF002155 1 223 7.4E-74 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 ProSitePatterns PS01199 Ribosomal protein L1 signature. 117 135 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_00775 11eff54a76fa4a2b80bb78ef9b56e14a 226 SUPERFAMILY SSF56808 5 222 4.71E-74 T 14-10-2018 IPR023674 Ribosomal protein L1-like JO40_11195 3285486a390ea1e47b18d9b299597e62 317 Gene3D G3DSA:3.90.550.10 20 233 2.5E-11 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_11195 3285486a390ea1e47b18d9b299597e62 317 SUPERFAMILY SSF53448 27 236 5.16E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_07130 0242e0f7faef45f3cb7ce5fba28f09f8 118 SUPERFAMILY SSF50891 1 112 1.52E-11 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JO40_07130 0242e0f7faef45f3cb7ce5fba28f09f8 118 Gene3D G3DSA:2.40.100.20 1 113 3.3E-11 T 14-10-2018 JO40_02625 8934cdb29c9478ce6e6f6da880f134cc 236 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 130 226 2.2E-31 T 14-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold JO40_02625 8934cdb29c9478ce6e6f6da880f134cc 236 Gene3D G3DSA:2.70.50.70 23 225 3.2E-47 T 14-10-2018 JO40_02625 8934cdb29c9478ce6e6f6da880f134cc 236 Gene3D G3DSA:4.10.520.10 25 114 3.2E-47 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO40_02625 8934cdb29c9478ce6e6f6da880f134cc 236 Pfam PF14848 DNA-binding domain 1 122 5.1E-41 T 14-10-2018 JO40_12695 69fe182efb4358d06f8b9ad1ea99d62a 790 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 486 591 2.4E-17 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 JO40_12695 69fe182efb4358d06f8b9ad1ea99d62a 790 Gene3D G3DSA:2.180.10.10 287 591 3.4E-48 T 14-10-2018 JO40_12695 69fe182efb4358d06f8b9ad1ea99d62a 790 Gene3D G3DSA:2.180.10.10 122 286 5.0E-28 T 14-10-2018 JO40_03605 3b7aee538123b03ace210fe1df78e0df 378 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 334 1.2E-14 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO40_02520 e0480e54fc84994f93c17c970585fbe6 245 Gene3D G3DSA:3.40.50.300 6 245 4.1E-67 T 14-10-2018 JO40_02520 e0480e54fc84994f93c17c970585fbe6 245 SUPERFAMILY SSF52540 7 238 7.69E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_02520 e0480e54fc84994f93c17c970585fbe6 245 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 8 245 3.7E-111 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 JO40_02520 e0480e54fc84994f93c17c970585fbe6 245 Pfam PF00005 ABC transporter 24 170 7.4E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_02520 e0480e54fc84994f93c17c970585fbe6 245 SMART SM00382 32 234 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 SMART SM00382 353 539 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 SUPERFAMILY SSF52540 324 563 1.94E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 Gene3D G3DSA:3.40.50.300 319 570 2.9E-85 T 14-10-2018 JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 Gene3D G3DSA:1.20.1560.10 6 297 4.4E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 SUPERFAMILY SSF90123 19 474 6.8E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 Pfam PF00005 ABC transporter 344 492 1.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 Pfam PF00664 ABC transporter transmembrane region 22 285 1.5E-23 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_03785 8541d090e5b0e8dc9337d6f1f06d776e 572 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_09370 1afc2cc16f4eb897997c400da2bd857b 309 Pfam PF13280 WYL domain 135 297 3.1E-26 T 14-10-2018 IPR026881 WYL domain JO40_09370 1afc2cc16f4eb897997c400da2bd857b 309 PIRSF PIRSF016838 79 309 1.6E-17 T 14-10-2018 IPR028349 Protein PafC JO40_09370 1afc2cc16f4eb897997c400da2bd857b 309 PIRSF PIRSF016838 1 54 2.0E-5 T 14-10-2018 IPR028349 Protein PafC JO40_09370 1afc2cc16f4eb897997c400da2bd857b 309 Gene3D G3DSA:1.10.10.10 1 62 1.0E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_09370 1afc2cc16f4eb897997c400da2bd857b 309 Pfam PF08279 HTH domain 5 59 6.6E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JO40_09370 1afc2cc16f4eb897997c400da2bd857b 309 SUPERFAMILY SSF46785 2 61 6.86E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_09370 1afc2cc16f4eb897997c400da2bd857b 309 SMART SM00420 5 61 0.0024 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JO40_05690 c4e95e9c17a0bc86eba8df2557381a66 85 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 6.7E-21 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_05690 c4e95e9c17a0bc86eba8df2557381a66 85 Gene3D G3DSA:1.10.1220.10 1 51 5.1E-11 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JO40_05690 c4e95e9c17a0bc86eba8df2557381a66 85 Pfam PF04221 RelB antitoxin 3 70 2.7E-11 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_13245 b7faffc29fd0970258a0368b95ae6f61 428 Pfam PF10282 Lactonase, 7-bladed beta-propeller 207 360 7.3E-7 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller JO40_13245 b7faffc29fd0970258a0368b95ae6f61 428 SUPERFAMILY SSF50969 122 426 3.41E-33 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like JO40_13245 b7faffc29fd0970258a0368b95ae6f61 428 Gene3D G3DSA:2.130.10.10 109 427 2.6E-95 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO40_13245 b7faffc29fd0970258a0368b95ae6f61 428 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 222 259 3.2E-7 T 14-10-2018 IPR011964 YVTN beta-propeller repeat JO40_02170 3d56c1636949f683d101c71872119758 269 Gene3D G3DSA:3.20.20.140 8 261 7.1E-46 T 14-10-2018 JO40_02170 3d56c1636949f683d101c71872119758 269 SUPERFAMILY SSF89550 9 258 3.01E-32 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JO40_03915 ef13f5f6fb4f6c2d37589bbd823f398e 527 Gene3D G3DSA:3.10.105.10 288 493 2.8E-46 T 14-10-2018 JO40_03915 ef13f5f6fb4f6c2d37589bbd823f398e 527 Gene3D G3DSA:3.40.190.10 24 287 6.1E-68 T 14-10-2018 JO40_03915 ef13f5f6fb4f6c2d37589bbd823f398e 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 446 4.3E-80 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO40_03915 ef13f5f6fb4f6c2d37589bbd823f398e 527 PIRSF PIRSF002741 1 525 3.6E-107 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO40_03915 ef13f5f6fb4f6c2d37589bbd823f398e 527 SUPERFAMILY SSF53850 38 522 2.47E-118 T 14-10-2018 JO40_07505 965f3ca0c76d8809d8fc6ea1ca22ac4e 228 Pfam PF13367 Protease prsW family 37 214 3.7E-5 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 JO40_03925 350b9748fa391173e3661d82b338c522 322 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_03925 350b9748fa391173e3661d82b338c522 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 3.1E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_03925 350b9748fa391173e3661d82b338c522 322 SUPERFAMILY SSF52540 4 253 8.11E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03925 350b9748fa391173e3661d82b338c522 322 Pfam PF00005 ABC transporter 24 181 1.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_03925 350b9748fa391173e3661d82b338c522 322 Gene3D G3DSA:3.40.50.300 1 322 1.6E-84 T 14-10-2018 JO40_03925 350b9748fa391173e3661d82b338c522 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.0E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_03925 350b9748fa391173e3661d82b338c522 322 SMART SM00382 33 246 4.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07955 d860265c298b8547bd5cfe8b866db749 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site JO40_07955 d860265c298b8547bd5cfe8b866db749 225 Pfam PF04002 RadC-like JAB domain 101 219 2.1E-41 T 14-10-2018 IPR025657 RadC-like JAB domain JO40_07955 d860265c298b8547bd5cfe8b866db749 225 Gene3D G3DSA:3.40.140.10 98 221 4.4E-41 T 14-10-2018 JO40_07955 d860265c298b8547bd5cfe8b866db749 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 220 6.0E-57 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 JO40_08915 d792df1ff603ff38c0749f1edc981306 93 Pfam PF01850 PIN domain 2 49 2.0E-5 T 14-10-2018 IPR002716 PIN domain JO40_08915 d792df1ff603ff38c0749f1edc981306 93 SUPERFAMILY SSF88723 1 93 1.68E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_01950 6d9364cf02e577799ff4e2066e2aef93 189 Pfam PF04205 FMN-binding domain 99 172 1.8E-9 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO40_01950 6d9364cf02e577799ff4e2066e2aef93 189 SMART SM00900 94 176 1.9E-11 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO40_02115 1aa264d4b0b18a3404db5c6c96e1a9bb 294 PIRSF PIRSF006483 5 294 1.2E-83 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT JO40_02115 1aa264d4b0b18a3404db5c6c96e1a9bb 294 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 232 286 3.3E-22 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 JO40_02115 1aa264d4b0b18a3404db5c6c96e1a9bb 294 Gene3D G3DSA:3.30.70.120 207 279 1.1E-26 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JO40_02115 1aa264d4b0b18a3404db5c6c96e1a9bb 294 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 22 227 6.6E-63 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT JO40_09680 9a7972ec8ed82828fad3e8ba9ed8e1fc 248 Pfam PF04620 Flagellar filament outer layer protein Flaa 24 239 1.5E-69 T 14-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 JO40_02335 991377cf025c591f29611a95201725ec 339 Gene3D G3DSA:3.60.10.10 33 336 4.5E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_02335 991377cf025c591f29611a95201725ec 339 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 101 288 3.9E-11 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JO40_02335 991377cf025c591f29611a95201725ec 339 SUPERFAMILY SSF56219 38 333 2.36E-29 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO40_08450 e1892686f154427d93fd62352b2f6743 1099 SUPERFAMILY SSF48452 776 978 1.29E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 Gene3D G3DSA:1.25.40.10 873 1068 1.2E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 Gene3D G3DSA:1.25.40.10 743 872 2.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 SUPERFAMILY SSF48452 566 821 3.37E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 SMART SM00028 949 982 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 SMART SM00028 915 948 0.74 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 SMART SM00028 789 822 3.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 SMART SM00028 567 600 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 SMART SM00028 880 914 80.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 Pfam PF14559 Tetratricopeptide repeat 893 948 1.4E-5 T 14-10-2018 JO40_08450 e1892686f154427d93fd62352b2f6743 1099 Gene3D G3DSA:1.25.40.10 569 730 7.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12830 79410c1c78ffaea2fd9bf653695c4f99 426 Pfam PF12704 MacB-like periplasmic core domain 29 208 3.3E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO40_12830 79410c1c78ffaea2fd9bf653695c4f99 426 Pfam PF02687 FtsX-like permease family 294 419 6.3E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_05870 fca1f275d28e3369f383da3c113ab3b7 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 218 7.1E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JO40_05870 fca1f275d28e3369f383da3c113ab3b7 259 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site JO40_06225 ff41a1229576016c7dc03a941d6e1664 350 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 4 350 7.2E-115 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO40_06225 ff41a1229576016c7dc03a941d6e1664 350 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 3 350 2.8E-139 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO40_01190 dc29c4c73f9389beb6c7e62526ba91db 216 Pfam PF03006 Haemolysin-III related 10 209 4.7E-37 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 JO40_01190 dc29c4c73f9389beb6c7e62526ba91db 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 215 3.5E-65 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 JO40_04975 2af1f52a112efa8b9308dee633874708 323 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 317 6.6E-24 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_04975 2af1f52a112efa8b9308dee633874708 323 Gene3D G3DSA:3.30.465.10 97 234 1.3E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO40_04975 2af1f52a112efa8b9308dee633874708 323 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 318 6.5E-72 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_04975 2af1f52a112efa8b9308dee633874708 323 Gene3D G3DSA:3.30.43.10 10 90 9.1E-24 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JO40_04975 2af1f52a112efa8b9308dee633874708 323 SUPERFAMILY SSF56194 218 320 3.79E-31 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_04975 2af1f52a112efa8b9308dee633874708 323 Pfam PF01565 FAD binding domain 38 169 1.1E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JO40_04975 2af1f52a112efa8b9308dee633874708 323 Gene3D G3DSA:3.90.78.10 236 323 3.6E-28 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_04975 2af1f52a112efa8b9308dee633874708 323 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 323 71.721 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO40_04975 2af1f52a112efa8b9308dee633874708 323 SUPERFAMILY SSF56176 13 192 1.34E-36 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO40_05190 882bc95309c34c7fedad4482b7a776cf 200 SUPERFAMILY SSF56954 5 196 1.13E-8 T 14-10-2018 JO40_05190 882bc95309c34c7fedad4482b7a776cf 200 Pfam PF02321 Outer membrane efflux protein 27 196 2.1E-8 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JO40_13120 770bc8382714e09bf87cfdf4cec90bd2 921 SUPERFAMILY SSF101898 603 916 1.07E-7 T 14-10-2018 JO40_13120 770bc8382714e09bf87cfdf4cec90bd2 921 SUPERFAMILY SSF69318 847 911 3.92E-8 T 14-10-2018 JO40_08105 d6223987b8df796c83a8076ebd6d6d12 308 Gene3D G3DSA:3.40.50.1820 26 304 1.3E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_08105 d6223987b8df796c83a8076ebd6d6d12 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 93 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_08105 d6223987b8df796c83a8076ebd6d6d12 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_08105 d6223987b8df796c83a8076ebd6d6d12 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 245 259 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO40_08105 d6223987b8df796c83a8076ebd6d6d12 308 Pfam PF12146 Serine aminopeptidase, S33 53 282 4.6E-14 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JO40_08105 d6223987b8df796c83a8076ebd6d6d12 308 SUPERFAMILY SSF53474 37 300 4.47E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_03780 5bd36966ad1bacfb6c3290cfc67db345 151 SUPERFAMILY SSF47413 4 71 3.75E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_03780 5bd36966ad1bacfb6c3290cfc67db345 151 Gene3D G3DSA:1.10.260.40 11 116 2.6E-9 T 14-10-2018 JO40_03780 5bd36966ad1bacfb6c3290cfc67db345 151 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 12 69 1.3E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_03155 766e9e9ac1f22d972b8fb8157b34f3df 316 Pfam PF07804 HipA-like C-terminal domain 56 283 5.5E-44 T 14-10-2018 IPR012893 HipA-like, C-terminal JO40_07815 8caf51e76f1e942559c5cc40ed6f2a37 312 SMART SM00382 28 211 3.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_07815 8caf51e76f1e942559c5cc40ed6f2a37 312 SUPERFAMILY SSF52540 3 229 2.0E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_07815 8caf51e76f1e942559c5cc40ed6f2a37 312 Pfam PF00005 ABC transporter 19 162 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_07815 8caf51e76f1e942559c5cc40ed6f2a37 312 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_07815 8caf51e76f1e942559c5cc40ed6f2a37 312 Gene3D G3DSA:3.40.50.300 1 241 9.8E-74 T 14-10-2018 JO40_04885 d7a8715370dddc11383715b288e43d4b 146 Gene3D G3DSA:1.10.1660.10 1 52 3.9E-8 T 14-10-2018 JO40_04885 d7a8715370dddc11383715b288e43d4b 146 SUPERFAMILY SSF46955 3 50 1.97E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JO40_04885 d7a8715370dddc11383715b288e43d4b 146 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 48 2.0E-8 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 JO40_04885 d7a8715370dddc11383715b288e43d4b 146 Pfam PF12728 Helix-turn-helix domain 4 50 1.7E-11 T 14-10-2018 JO40_09955 baf3a69a4de3629e6e646bf4e0d471a9 266 Gene3D G3DSA:3.90.550.20 1 230 2.6E-37 T 14-10-2018 JO40_09955 baf3a69a4de3629e6e646bf4e0d471a9 266 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 18 97 4.5E-16 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif JO40_09955 baf3a69a4de3629e6e646bf4e0d471a9 266 SUPERFAMILY SSF53448 1 226 9.84E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_05580 059cbc4673f9190c068006e5e2fc4347 184 Gene3D G3DSA:3.40.630.30 2 183 3.6E-40 T 14-10-2018 JO40_05580 059cbc4673f9190c068006e5e2fc4347 184 SUPERFAMILY SSF55729 3 171 5.6E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_05580 059cbc4673f9190c068006e5e2fc4347 184 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 2.6E-18 T 14-10-2018 IPR000182 GNAT domain JO40_00535 b7702da9c5c105a981e54a836f5edf17 552 SUPERFAMILY SSF56059 88 332 4.24E-33 T 14-10-2018 JO40_00535 b7702da9c5c105a981e54a836f5edf17 552 SUPERFAMILY SSF52440 3 68 5.18E-9 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JO40_00535 b7702da9c5c105a981e54a836f5edf17 552 Gene3D G3DSA:3.30.470.20 194 418 2.0E-30 T 14-10-2018 JO40_00535 b7702da9c5c105a981e54a836f5edf17 552 Pfam PF02655 ATP-grasp domain 106 256 1.3E-8 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 JO40_00535 b7702da9c5c105a981e54a836f5edf17 552 Gene3D G3DSA:3.40.50.20 1 122 3.9E-36 T 14-10-2018 JO40_00535 b7702da9c5c105a981e54a836f5edf17 552 Gene3D G3DSA:3.30.1490.20 124 193 4.6E-8 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO40_07975 b5168f5fea6b47f26be013c449596308 278 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 24 276 6.0E-74 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 JO40_07975 b5168f5fea6b47f26be013c449596308 278 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site JO40_07975 b5168f5fea6b47f26be013c449596308 278 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site JO40_07975 b5168f5fea6b47f26be013c449596308 278 Pfam PF01226 Formate/nitrite transporter 11 273 1.3E-78 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 JO40_07975 b5168f5fea6b47f26be013c449596308 278 Gene3D G3DSA:1.20.1080.10 2 265 7.5E-90 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JO40_11135 5e1ed5729372fb22545cf0c33b6af516 101 Pfam PF08666 SAF domain 16 92 4.7E-16 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JO40_11135 5e1ed5729372fb22545cf0c33b6af516 101 Gene3D G3DSA:3.90.1210.30 8 95 2.5E-28 T 14-10-2018 JO40_11135 5e1ed5729372fb22545cf0c33b6af516 101 SMART SM00858 16 92 6.1E-11 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 Pfam PF12804 MobA-like NTP transferase domain 65 157 6.3E-12 T 14-10-2018 IPR025877 MobA-like NTP transferase JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 Gene3D G3DSA:3.30.200.20 292 384 1.8E-25 T 14-10-2018 JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 SUPERFAMILY SSF56112 287 575 8.26E-44 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 Pfam PF01633 Choline/ethanolamine kinase 332 517 1.8E-23 T 14-10-2018 JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 SUPERFAMILY SSF53448 64 281 6.08E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 PIRSF PIRSF037383 1 583 1.4E-265 T 14-10-2018 IPR017190 Bifunctional CTP:phosphocholine cytidylyltransferase/choline kinase JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 Gene3D G3DSA:3.90.1200.10 385 583 7.5E-54 T 14-10-2018 JO40_09015 7c1e3233fc31c2b55f4be58c155205c2 583 Gene3D G3DSA:3.90.550.10 64 287 1.0E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_12520 6266374b2fdb27744aceccbd0758155b 239 Gene3D G3DSA:1.25.40.10 130 239 7.7E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12655 6266374b2fdb27744aceccbd0758155b 239 Gene3D G3DSA:1.25.40.10 130 239 7.7E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 Pfam PF13181 Tetratricopeptide repeat 335 357 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 Pfam PF13181 Tetratricopeptide repeat 298 325 0.035 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 SMART SM00954 51 176 1.3E-22 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 Pfam PF04607 Region found in RelA / SpoT proteins 51 172 3.4E-22 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 Gene3D G3DSA:1.25.40.10 169 406 1.0E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 SMART SM00028 360 393 55.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 SMART SM00028 326 359 0.049 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 SMART SM00028 292 325 0.0035 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 SMART SM00028 255 288 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 Gene3D G3DSA:3.30.460.10 9 157 1.9E-24 T 14-10-2018 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 SUPERFAMILY SSF81301 14 204 1.59E-34 T 14-10-2018 JO40_10655 0e8d88ce93174ef849d6ff953d946946 410 SUPERFAMILY SSF48452 255 390 4.74E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_01710 a13f2af4fd5b7a30d5b35caad72a69a5 83 SUPERFAMILY SSF160544 7 82 1.31E-18 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JO40_01710 a13f2af4fd5b7a30d5b35caad72a69a5 83 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 79 5.0E-18 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO40_01710 a13f2af4fd5b7a30d5b35caad72a69a5 83 Gene3D G3DSA:3.40.1690.10 6 83 2.2E-21 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JO40_00265 4668deead140cf78e4af8bd473ff2dcd 301 SUPERFAMILY SSF103481 43 144 2.62E-7 T 14-10-2018 JO40_00265 4668deead140cf78e4af8bd473ff2dcd 301 Pfam PF00892 EamA-like transporter family 155 288 5.3E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_00265 4668deead140cf78e4af8bd473ff2dcd 301 Pfam PF00892 EamA-like transporter family 12 141 1.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_00265 4668deead140cf78e4af8bd473ff2dcd 301 SUPERFAMILY SSF103481 195 288 3.01E-13 T 14-10-2018 JO40_09960 cdf578e22905ecd4c44f904015c43241 356 Gene3D G3DSA:3.40.50.2000 1 177 4.0E-29 T 14-10-2018 JO40_09960 cdf578e22905ecd4c44f904015c43241 356 Pfam PF00534 Glycosyl transferases group 1 184 330 5.2E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO40_09960 cdf578e22905ecd4c44f904015c43241 356 Gene3D G3DSA:3.40.50.2000 181 337 5.2E-29 T 14-10-2018 JO40_09960 cdf578e22905ecd4c44f904015c43241 356 SUPERFAMILY SSF53756 3 354 3.66E-65 T 14-10-2018 JO40_09960 cdf578e22905ecd4c44f904015c43241 356 Pfam PF13439 Glycosyltransferase Family 4 13 168 3.4E-21 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JO40_06275 5fb6660a3c9b5bdae55bae984cfc586b 462 Pfam PF09243 Mitochondrial small ribosomal subunit Rsm22 272 322 1.3E-8 T 14-10-2018 IPR015324 Ribosomal protein Rsm22-like GO:0006412|GO:0008168 JO40_06275 5fb6660a3c9b5bdae55bae984cfc586b 462 Gene3D G3DSA:3.40.50.150 126 306 4.9E-7 T 14-10-2018 JO40_06275 5fb6660a3c9b5bdae55bae984cfc586b 462 SUPERFAMILY SSF53335 146 304 4.41E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_06010 59759b659c5faf48717afbf2e6a0084b 390 Gene3D G3DSA:3.30.950.30 2 135 6.3E-20 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily JO40_06010 59759b659c5faf48717afbf2e6a0084b 390 Gene3D G3DSA:3.30.565.60 226 383 8.1E-27 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily JO40_06010 59759b659c5faf48717afbf2e6a0084b 390 Pfam PF04326 Putative DNA-binding domain 14 129 2.5E-19 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 JO40_06010 59759b659c5faf48717afbf2e6a0084b 390 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 301 366 1.0E-11 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain JO40_07235 ed3a9a71b27c121156b809c51dcf2490 827 Gene3D G3DSA:3.30.470.20 181 329 1.2E-45 T 14-10-2018 JO40_07235 ed3a9a71b27c121156b809c51dcf2490 827 SUPERFAMILY SSF56059 3 318 2.83E-93 T 14-10-2018 JO40_07235 ed3a9a71b27c121156b809c51dcf2490 827 SUPERFAMILY SSF52009 723 825 2.75E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO40_07235 ed3a9a71b27c121156b809c51dcf2490 827 Gene3D G3DSA:3.30.1490.20 1 180 5.2E-64 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO40_07235 ed3a9a71b27c121156b809c51dcf2490 827 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 323 5.3E-103 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JO40_07235 ed3a9a71b27c121156b809c51dcf2490 827 Gene3D G3DSA:3.50.30.10 723 827 3.8E-34 T 14-10-2018 JO40_07235 ed3a9a71b27c121156b809c51dcf2490 827 Pfam PF00391 PEP-utilising enzyme, mobile domain 751 822 1.3E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO40_02295 8dfdcae336baf1b5f691b3e39dfc4939 94 SUPERFAMILY SSF54189 3 93 1.47E-29 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02295 8dfdcae336baf1b5f691b3e39dfc4939 94 Gene3D G3DSA:3.30.70.330 1 94 2.8E-33 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JO40_02295 8dfdcae336baf1b5f691b3e39dfc4939 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 21.447 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JO40_02295 8dfdcae336baf1b5f691b3e39dfc4939 94 Pfam PF00276 Ribosomal protein L23 5 89 5.1E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JO40_02295 8dfdcae336baf1b5f691b3e39dfc4939 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_03960 ae76c58c5f890192e1d15263827847a1 82 Pfam PF11823 Protein of unknown function (DUF3343) 2 68 1.6E-17 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 Gene3D G3DSA:3.40.50.1260 192 408 4.7E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 4 418 40.692 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 190 212 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 335 360 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 127 142 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 159 181 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 371 382 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 394 411 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PRINTS PR00477 Phosphoglycerate kinase family signature 213 232 2.1E-93 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 PIRSF PIRSF000724 1 419 2.0E-156 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 Pfam PF00162 Phosphoglycerate kinase 5 408 1.4E-152 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 SUPERFAMILY SSF53748 2 417 1.41E-154 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_10635 e3e2cb07ca501bb46036015118036dd9 419 Gene3D G3DSA:3.40.50.1260 6 416 4.7E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO40_05810 e133b6c084fe13ab3f0475ee715daff6 296 PIRSF PIRSF003092 1 295 4.8E-83 T 14-10-2018 IPR025501 ATP binding protein MinD JO40_05810 e133b6c084fe13ab3f0475ee715daff6 296 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 34 251 1.5E-20 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JO40_05810 e133b6c084fe13ab3f0475ee715daff6 296 Gene3D G3DSA:3.40.50.300 31 273 6.4E-57 T 14-10-2018 JO40_05810 e133b6c084fe13ab3f0475ee715daff6 296 SUPERFAMILY SSF52540 30 275 1.28E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_13390 754d3d83a619592300b3e8aad273c2e7 94 Pfam PF04999 Cell division protein FtsL 5 77 3.4E-6 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 JO40_02855 3dda5c607b10402e980ac4e644035ef7 485 SUPERFAMILY SSF75304 2 482 1.83E-138 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO40_02855 3dda5c607b10402e980ac4e644035ef7 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 10 485 76.643 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO40_02855 3dda5c607b10402e980ac4e644035ef7 485 ProSitePatterns PS00571 Amidases signature. 155 186 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 JO40_02855 3dda5c607b10402e980ac4e644035ef7 485 Gene3D G3DSA:3.90.1300.10 2 485 1.9E-163 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO40_02855 3dda5c607b10402e980ac4e644035ef7 485 Pfam PF01425 Amidase 42 474 1.7E-138 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO40_02855 3dda5c607b10402e980ac4e644035ef7 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 483 4.6E-158 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO40_00370 c179c227f5734c3e79542e9c94046456 597 Gene3D G3DSA:1.25.40.10 185 358 4.9E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_00370 c179c227f5734c3e79542e9c94046456 597 Gene3D G3DSA:1.25.40.10 411 594 1.3E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_00370 c179c227f5734c3e79542e9c94046456 597 SUPERFAMILY SSF48452 201 384 6.96E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_00370 c179c227f5734c3e79542e9c94046456 597 SUPERFAMILY SSF48452 357 584 3.22E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_03730 b40314ddeb4adb9a081cff57581aa334 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 8 196 1.1E-53 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_03730 b40314ddeb4adb9a081cff57581aa334 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 11 196 3.4E-39 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_04750 a93735b3365a4c056c2804874d702d0e 222 Pfam PF03471 Transporter associated domain 143 216 2.5E-10 T 14-10-2018 IPR005170 Transporter-associated domain JO40_04750 a93735b3365a4c056c2804874d702d0e 222 SUPERFAMILY SSF56176 143 220 1.42E-12 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO40_04750 a93735b3365a4c056c2804874d702d0e 222 Gene3D G3DSA:3.30.465.10 134 218 1.3E-10 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO40_04750 a93735b3365a4c056c2804874d702d0e 222 SMART SM01091 137 218 8.0E-12 T 14-10-2018 IPR005170 Transporter-associated domain JO40_06220 eada74699565c3c5a95f681fb010c7a0 199 Gene3D G3DSA:1.10.260.40 5 76 1.2E-15 T 14-10-2018 JO40_06220 eada74699565c3c5a95f681fb010c7a0 199 SUPERFAMILY SSF47413 13 69 2.97E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_06220 eada74699565c3c5a95f681fb010c7a0 199 Pfam PF07883 Cupin domain 118 184 2.1E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel JO40_06220 eada74699565c3c5a95f681fb010c7a0 199 SUPERFAMILY SSF51182 54 191 1.05E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO40_06220 eada74699565c3c5a95f681fb010c7a0 199 Gene3D G3DSA:2.60.120.10 77 194 8.1E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_06220 eada74699565c3c5a95f681fb010c7a0 199 SMART SM00530 18 73 4.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_06220 eada74699565c3c5a95f681fb010c7a0 199 Pfam PF01381 Helix-turn-helix 19 70 7.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 SMART SM00028 62 95 29.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 SMART SM00028 28 61 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 SMART SM00028 97 130 0.069 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 SMART SM00028 131 164 0.32 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 SUPERFAMILY SSF48452 28 168 1.26E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 Gene3D G3DSA:1.25.40.10 90 232 3.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 Pfam PF13181 Tetratricopeptide repeat 99 127 0.0057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_08710 e014dc9e3a66f76694942a80515936b0 246 Gene3D G3DSA:1.25.40.10 21 89 7.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08200 d229a5b27b00b702d33ce8007c14a869 510 SUPERFAMILY SSF54534 213 312 2.29E-7 T 14-10-2018 JO40_06915 0e516e70ac8786f14763885c6f19ca71 189 Pfam PF13563 2'-5' RNA ligase superfamily 25 176 5.5E-15 T 14-10-2018 JO40_06915 0e516e70ac8786f14763885c6f19ca71 189 SUPERFAMILY SSF55144 10 186 1.96E-21 T 14-10-2018 IPR009097 Cyclic phosphodiesterase JO40_06915 0e516e70ac8786f14763885c6f19ca71 189 Gene3D G3DSA:3.90.1140.10 10 187 2.2E-21 T 14-10-2018 JO40_04630 8bcaeb94f659e844f8b55edb12b663b1 254 SUPERFAMILY SSF53474 19 254 1.33E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_04630 8bcaeb94f659e844f8b55edb12b663b1 254 Gene3D G3DSA:3.40.50.1820 8 254 3.2E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_04630 8bcaeb94f659e844f8b55edb12b663b1 254 Pfam PF00326 Prolyl oligopeptidase family 100 238 1.4E-12 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JO40_03130 76d00a7052782809b50c99579604de0c 473 Gene3D G3DSA:3.40.50.300 1 169 2.3E-29 T 14-10-2018 JO40_03130 76d00a7052782809b50c99579604de0c 473 Pfam PF03008 Archaea bacterial proteins of unknown function 311 418 1.5E-26 T 14-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal JO40_03130 76d00a7052782809b50c99579604de0c 473 SUPERFAMILY SSF52540 1 240 4.57E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03130 76d00a7052782809b50c99579604de0c 473 Pfam PF01637 ATPase domain predominantly from Archaea 2 202 3.0E-25 T 14-10-2018 IPR011579 ATPase domain GO:0005524 JO40_05555 9b05809258e215fff14489beb51f0523 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 7 196 3.8E-63 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_05555 9b05809258e215fff14489beb51f0523 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 9 196 2.4E-53 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_09550 715f37ea55a6a7104e22520125271431 205 Pfam PF01991 ATP synthase (E/31 kDa) subunit 20 193 3.6E-7 T 14-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_09550 715f37ea55a6a7104e22520125271431 205 Gene3D G3DSA:3.30.2320.30 79 198 1.7E-7 T 14-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_09550 715f37ea55a6a7104e22520125271431 205 SUPERFAMILY SSF160527 98 198 9.42E-11 T 14-10-2018 JO40_09550 715f37ea55a6a7104e22520125271431 205 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 3 200 11.618 T 14-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_05400 1964f8536c771d5cfb4cedfb9e8ad052 342 Pfam PF05343 M42 glutamyl aminopeptidase 47 334 9.1E-71 T 14-10-2018 IPR008007 Peptidase M42 JO40_05400 1964f8536c771d5cfb4cedfb9e8ad052 342 Gene3D G3DSA:2.40.30.40 75 169 8.4E-119 T 14-10-2018 IPR023367 Peptidase M42, domain 2 JO40_05400 1964f8536c771d5cfb4cedfb9e8ad052 342 SUPERFAMILY SSF53187 6 340 5.76E-47 T 14-10-2018 JO40_05400 1964f8536c771d5cfb4cedfb9e8ad052 342 PIRSF PIRSF001123 4 341 5.7E-35 T 14-10-2018 IPR008007 Peptidase M42 JO40_05400 1964f8536c771d5cfb4cedfb9e8ad052 342 SUPERFAMILY SSF101821 72 184 3.36E-29 T 14-10-2018 JO40_05400 1964f8536c771d5cfb4cedfb9e8ad052 342 Gene3D G3DSA:3.40.630.10 12 339 8.4E-119 T 14-10-2018 JO40_10190 387b9c3c38ba762e128a45686c9e8955 102 SUPERFAMILY SSF81301 4 99 6.31E-21 T 14-10-2018 JO40_10190 387b9c3c38ba762e128a45686c9e8955 102 Gene3D G3DSA:3.30.460.10 4 97 1.2E-22 T 14-10-2018 JO40_10190 387b9c3c38ba762e128a45686c9e8955 102 Pfam PF01909 Nucleotidyltransferase domain 18 97 1.8E-11 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JO40_13280 da2f88661dc9a86abe58efd43a90a7c4 809 SMART SM00028 516 549 48.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_13280 da2f88661dc9a86abe58efd43a90a7c4 809 SMART SM00028 476 509 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_13280 da2f88661dc9a86abe58efd43a90a7c4 809 SMART SM00028 556 589 43.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_13280 da2f88661dc9a86abe58efd43a90a7c4 809 Gene3D G3DSA:1.25.40.10 428 587 2.4E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_13280 da2f88661dc9a86abe58efd43a90a7c4 809 SUPERFAMILY SSF48452 473 621 8.35E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_02710 a9667e2c42a0aaafc53f61b2a0364f3c 311 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 187 1.1E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO40_02710 a9667e2c42a0aaafc53f61b2a0364f3c 311 Gene3D G3DSA:3.40.47.10 2 311 9.5E-116 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO40_02710 a9667e2c42a0aaafc53f61b2a0364f3c 311 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 311 60.919 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO40_02710 a9667e2c42a0aaafc53f61b2a0364f3c 311 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 311 4.6E-100 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO40_02710 a9667e2c42a0aaafc53f61b2a0364f3c 311 SUPERFAMILY SSF53901 5 311 5.77E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO40_02710 a9667e2c42a0aaafc53f61b2a0364f3c 311 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 222 310 2.1E-33 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO40_03830 08209f52c149120e044dcdbde00a3b07 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.9E-27 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO40_03830 08209f52c149120e044dcdbde00a3b07 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 4.9E-30 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 JO40_03830 08209f52c149120e044dcdbde00a3b07 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.7E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO40_03830 08209f52c149120e044dcdbde00a3b07 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.7E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO40_03830 08209f52c149120e044dcdbde00a3b07 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.7E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO40_03830 08209f52c149120e044dcdbde00a3b07 89 PIRSF PIRSF004669 1 89 3.4E-29 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO40_10165 0176ddd39a62ce9df6076b9c4f636144 444 Pfam PF12704 MacB-like periplasmic core domain 18 243 2.0E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO40_10165 0176ddd39a62ce9df6076b9c4f636144 444 Pfam PF02687 FtsX-like permease family 335 434 1.6E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_07030 e11987a1427097971987621b4f2f6987 166 SUPERFAMILY SSF55729 4 160 3.85E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_07030 e11987a1427097971987621b4f2f6987 166 Gene3D G3DSA:3.40.630.30 1 162 4.1E-22 T 14-10-2018 JO40_08365 10f63e63c9b1621230250eff04e7fe5a 325 Pfam PF00005 ABC transporter 27 185 8.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08365 10f63e63c9b1621230250eff04e7fe5a 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 2.2E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_08365 10f63e63c9b1621230250eff04e7fe5a 325 SUPERFAMILY SSF52540 7 257 2.35E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08365 10f63e63c9b1621230250eff04e7fe5a 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 302 8.9E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO40_08365 10f63e63c9b1621230250eff04e7fe5a 325 Gene3D G3DSA:3.40.50.300 5 325 1.0E-94 T 14-10-2018 JO40_08365 10f63e63c9b1621230250eff04e7fe5a 325 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_08365 10f63e63c9b1621230250eff04e7fe5a 325 SMART SM00382 36 235 5.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11155 930a59f420b6e793e021212756f73c21 233 SUPERFAMILY SSF48452 46 227 5.69E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11155 930a59f420b6e793e021212756f73c21 233 Gene3D G3DSA:1.25.40.10 35 232 6.9E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11155 930a59f420b6e793e021212756f73c21 233 SMART SM00028 117 150 320.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11155 930a59f420b6e793e021212756f73c21 233 SMART SM00028 43 76 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11155 930a59f420b6e793e021212756f73c21 233 SMART SM00028 188 221 0.27 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11155 930a59f420b6e793e021212756f73c21 233 SMART SM00028 154 187 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_11155 930a59f420b6e793e021212756f73c21 233 Pfam PF13432 Tetratricopeptide repeat 162 220 5.0E-4 T 14-10-2018 JO40_13290 582887517ba337de51f0a72841afd7fa 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_13290 582887517ba337de51f0a72841afd7fa 473 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 5 435 1.9E-187 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_13290 582887517ba337de51f0a72841afd7fa 473 Gene3D G3DSA:3.40.50.12240 13 437 8.9E-150 T 14-10-2018 JO40_13290 582887517ba337de51f0a72841afd7fa 473 SMART SM00382 158 339 7.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_13290 582887517ba337de51f0a72841afd7fa 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 30 89 3.9E-5 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_13290 582887517ba337de51f0a72841afd7fa 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 355 3.1E-75 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_13290 582887517ba337de51f0a72841afd7fa 473 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 22 434 1.1E-184 T 14-10-2018 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO40_13290 582887517ba337de51f0a72841afd7fa 473 SUPERFAMILY SSF52540 93 359 4.65E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_13240 97b2ab90354961ee4f913606d52caa40 51 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.1E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_13240 97b2ab90354961ee4f913606d52caa40 51 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.108 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_13240 97b2ab90354961ee4f913606d52caa40 51 Pfam PF00468 Ribosomal protein L34 1 44 5.9E-20 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_13240 97b2ab90354961ee4f913606d52caa40 51 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-15 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_01105 774fb4bab879eaf5a8f57a63b90ee3cf 304 Pfam PF14238 Domain of unknown function (DUF4340) 86 218 2.9E-7 T 14-10-2018 IPR025641 Domain of unknown function DUF4340 JO40_00620 29141ac631036b8c2b50da02751b573c 62 SUPERFAMILY SSF57829 1 56 1.34E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JO40_00620 29141ac631036b8c2b50da02751b573c 62 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 57 1.8E-26 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00620 29141ac631036b8c2b50da02751b573c 62 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 19.811 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_00620 29141ac631036b8c2b50da02751b573c 62 Pfam PF01783 Ribosomal L32p protein family 2 57 6.2E-24 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_11845 0b6395e3e084c03cf48735bee44f50f3 146 Pfam PF00072 Response regulator receiver domain 27 139 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_11845 0b6395e3e084c03cf48735bee44f50f3 146 Gene3D G3DSA:3.40.50.2300 16 143 7.8E-36 T 14-10-2018 JO40_11845 0b6395e3e084c03cf48735bee44f50f3 146 SUPERFAMILY SSF52172 23 144 1.42E-33 T 14-10-2018 IPR011006 CheY-like superfamily JO40_11845 0b6395e3e084c03cf48735bee44f50f3 146 SMART SM00448 25 139 3.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO40_07750 c7b4e62d4211228b62a523db8e3811d5 491 Gene3D G3DSA:3.40.190.10 37 454 6.8E-33 T 14-10-2018 JO40_07750 c7b4e62d4211228b62a523db8e3811d5 491 SUPERFAMILY SSF53850 40 445 1.15E-28 T 14-10-2018 JO40_07750 c7b4e62d4211228b62a523db8e3811d5 491 Pfam PF13416 Bacterial extracellular solute-binding protein 61 393 8.1E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO40_03565 4945bfed4b995d231f6d1c189f71512a 343 Gene3D G3DSA:2.70.70.10 178 338 8.1E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_03565 4945bfed4b995d231f6d1c189f71512a 343 SUPERFAMILY SSF51261 174 334 1.1E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif JO40_03565 4945bfed4b995d231f6d1c189f71512a 343 Pfam PF01551 Peptidase family M23 235 330 6.6E-32 T 14-10-2018 IPR016047 Peptidase M23 JO40_09910 664ef70fad462d7077d3fabae6d09202 210 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 175 1.9E-29 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 JO40_04305 f0cb2562d8e405dfc8c0d9c17b871945 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 71 254 2.5E-49 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JO40_04305 f0cb2562d8e405dfc8c0d9c17b871945 257 Gene3D G3DSA:2.50.20.10 19 253 5.2E-53 T 14-10-2018 JO40_05155 9c8ccc0fb6ee6e1f4273996d2136bc7a 263 SUPERFAMILY SSF52540 32 245 1.43E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05155 9c8ccc0fb6ee6e1f4273996d2136bc7a 263 Pfam PF00005 ABC transporter 38 182 3.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05155 9c8ccc0fb6ee6e1f4273996d2136bc7a 263 Gene3D G3DSA:3.40.50.300 1 260 1.8E-52 T 14-10-2018 JO40_05155 9c8ccc0fb6ee6e1f4273996d2136bc7a 263 SMART SM00382 47 231 9.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_10345 b00910e2e1d5daf1f992469843a1fd19 82 Gene3D G3DSA:3.30.2310.20 27 70 1.9E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_00405 9ff0a1372c850733e9b3b937d45f2788 117 Pfam PF11756 Nitrous oxide-stimulated promoter 9 111 1.6E-31 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA JO40_00405 9ff0a1372c850733e9b3b937d45f2788 117 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 5 102 2.0E-45 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA JO40_08345 00e80ac545c660a935beb2c543160909 392 Pfam PF13635 Domain of unknown function (DUF4143) 179 328 4.7E-25 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 JO40_08345 00e80ac545c660a935beb2c543160909 392 Pfam PF13173 AAA domain 22 137 5.3E-22 T 14-10-2018 JO40_08345 00e80ac545c660a935beb2c543160909 392 SUPERFAMILY SSF52540 8 140 2.3E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06165 94fd3bcbc2e678d721bf670b1e34209c 281 SUPERFAMILY SSF56176 9 174 1.64E-32 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO40_06165 94fd3bcbc2e678d721bf670b1e34209c 281 Gene3D G3DSA:3.30.465.10 6 176 5.0E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO40_06165 94fd3bcbc2e678d721bf670b1e34209c 281 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 10 175 9.2E-37 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 JO40_04310 76f8057ec3e2c383efb51591842d9250 900 SUPERFAMILY SSF82866 673 875 6.54E-34 T 14-10-2018 JO40_04310 76f8057ec3e2c383efb51591842d9250 900 Gene3D G3DSA:1.20.1640.10 203 396 2.5E-19 T 14-10-2018 JO40_04310 76f8057ec3e2c383efb51591842d9250 900 Gene3D G3DSA:1.20.1640.10 696 876 5.9E-10 T 14-10-2018 JO40_04310 76f8057ec3e2c383efb51591842d9250 900 Pfam PF03176 MMPL family 152 392 5.7E-31 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO40_04310 76f8057ec3e2c383efb51591842d9250 900 Pfam PF03176 MMPL family 661 869 1.1E-21 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO40_04310 76f8057ec3e2c383efb51591842d9250 900 SUPERFAMILY SSF82866 168 386 1.57E-35 T 14-10-2018 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 Pfam PF13181 Tetratricopeptide repeat 169 198 0.035 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 Gene3D G3DSA:1.25.40.10 31 131 6.7E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 SUPERFAMILY SSF48452 33 203 6.58E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 40 120 2.9E-6 T 14-10-2018 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 SMART SM00028 166 199 0.068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 SMART SM00028 95 128 91.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 SMART SM00028 23 60 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 SMART SM00028 132 165 49.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_10410 4c35b703966fa4148dc948a0698872eb 213 Gene3D G3DSA:1.25.40.10 132 212 4.8E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11410 dba988a31f431a1389dec94def5abf90 211 Gene3D G3DSA:1.25.40.10 12 101 9.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11410 dba988a31f431a1389dec94def5abf90 211 SUPERFAMILY SSF48452 26 153 1.52E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_11410 dba988a31f431a1389dec94def5abf90 211 Gene3D G3DSA:1.25.40.10 102 179 1.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_02530 e8a416a85c69f210951e91cc5d1407c3 231 SUPERFAMILY SSF81296 150 230 2.1E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set JO40_02530 e8a416a85c69f210951e91cc5d1407c3 231 SUPERFAMILY SSF81296 52 129 8.4E-5 T 14-10-2018 IPR014756 Immunoglobulin E-set JO40_02530 e8a416a85c69f210951e91cc5d1407c3 231 Gene3D G3DSA:2.60.40.10 136 229 3.9E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_08935 5bce2b9b5010379d3fc2c58950216aa5 396 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 391 8.8E-123 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 JO40_08935 5bce2b9b5010379d3fc2c58950216aa5 396 SUPERFAMILY SSF53383 2 393 1.22E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_08935 5bce2b9b5010379d3fc2c58950216aa5 396 Pfam PF00155 Aminotransferase class I and II 68 381 1.2E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO40_08935 5bce2b9b5010379d3fc2c58950216aa5 396 Gene3D G3DSA:3.90.1150.10 23 385 6.0E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_08935 5bce2b9b5010379d3fc2c58950216aa5 396 Gene3D G3DSA:3.40.640.10 70 295 6.0E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_02585 91297c4fe9e1c6a108a61f46c06da91e 483 Gene3D G3DSA:3.60.40.10 236 481 1.7E-47 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_02585 91297c4fe9e1c6a108a61f46c06da91e 483 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 289 481 9.9E-30 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_02585 91297c4fe9e1c6a108a61f46c06da91e 483 SUPERFAMILY SSF81606 277 482 7.59E-8 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_02585 91297c4fe9e1c6a108a61f46c06da91e 483 SMART SM00331 262 481 4.0E-41 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO40_02220 1618a1d8f01643e1988c46d3195ba837 61 SUPERFAMILY SSF55129 3 60 2.62E-17 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JO40_02220 1618a1d8f01643e1988c46d3195ba837 61 Pfam PF00327 Ribosomal protein L30p/L7e 7 55 2.2E-15 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JO40_02220 1618a1d8f01643e1988c46d3195ba837 61 Gene3D G3DSA:3.30.1390.20 1 59 7.1E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JO40_02220 1618a1d8f01643e1988c46d3195ba837 61 PIRSF PIRSF002211 1 61 8.5E-24 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02220 1618a1d8f01643e1988c46d3195ba837 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 3.6E-20 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02220 1618a1d8f01643e1988c46d3195ba837 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 16.622 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_11700 84cfeab0657abe0344769f6e63c0f716 153 PIRSF PIRSF036531 1 146 7.5E-53 T 14-10-2018 IPR017058 Major membrane immunogen, tpp15, predicted JO40_11700 84cfeab0657abe0344769f6e63c0f716 153 Gene3D G3DSA:3.90.1010.20 29 152 2.9E-16 T 14-10-2018 JO40_11700 84cfeab0657abe0344769f6e63c0f716 153 SMART SM00900 44 142 6.1E-5 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO40_11700 84cfeab0657abe0344769f6e63c0f716 153 Pfam PF04205 FMN-binding domain 45 139 3.4E-9 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO40_10145 9ad61c4905798f7996205ae3e93d63f2 336 Gene3D G3DSA:3.30.479.30 132 271 2.0E-6 T 14-10-2018 JO40_10145 9ad61c4905798f7996205ae3e93d63f2 336 Pfam PF01145 SPFH domain / Band 7 family 69 278 1.4E-21 T 14-10-2018 IPR001107 Band 7 domain JO40_10145 9ad61c4905798f7996205ae3e93d63f2 336 SUPERFAMILY SSF117892 135 271 5.62E-9 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO40_10145 9ad61c4905798f7996205ae3e93d63f2 336 SMART SM00244 65 269 1.4E-8 T 14-10-2018 IPR001107 Band 7 domain JO40_09155 78540134d331e820f571d542c71600a0 463 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 2.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO40_09155 78540134d331e820f571d542c71600a0 463 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 2.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO40_09155 78540134d331e820f571d542c71600a0 463 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 2.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO40_09155 78540134d331e820f571d542c71600a0 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO40_09155 78540134d331e820f571d542c71600a0 463 SUPERFAMILY SSF48557 1 458 1.88E-141 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JO40_09155 78540134d331e820f571d542c71600a0 463 Pfam PF10415 Fumarase C C-terminus 406 459 5.1E-23 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JO40_09155 78540134d331e820f571d542c71600a0 463 Gene3D G3DSA:1.10.275.10 1 137 8.3E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JO40_09155 78540134d331e820f571d542c71600a0 463 Gene3D G3DSA:1.20.200.10 138 405 1.3E-102 T 14-10-2018 JO40_09155 78540134d331e820f571d542c71600a0 463 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JO40_09155 78540134d331e820f571d542c71600a0 463 Pfam PF00206 Lyase 9 340 3.0E-90 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal JO40_09155 78540134d331e820f571d542c71600a0 463 Gene3D G3DSA:1.10.40.30 406 457 6.7E-22 T 14-10-2018 JO40_04520 cabd999859dff0bf0b2d91e0610c1457 81 SUPERFAMILY SSF47598 4 45 3.17E-6 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO40_06740 ca2e011b833d11bc268e4f2fac670d0c 227 Pfam PF00005 ABC transporter 19 150 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06740 ca2e011b833d11bc268e4f2fac670d0c 227 Gene3D G3DSA:3.40.50.300 1 219 6.8E-53 T 14-10-2018 JO40_06740 ca2e011b833d11bc268e4f2fac670d0c 227 SMART SM00382 28 200 2.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06740 ca2e011b833d11bc268e4f2fac670d0c 227 SUPERFAMILY SSF52540 2 208 7.11E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00035 f280cc2f809487fcbf45a1a4dd6a4616 682 Pfam PF02233 NAD(P) transhydrogenase beta subunit 11 482 4.5E-154 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JO40_00035 f280cc2f809487fcbf45a1a4dd6a4616 682 Pfam PF02233 NAD(P) transhydrogenase beta subunit 500 680 1.5E-79 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JO40_00035 f280cc2f809487fcbf45a1a4dd6a4616 682 SUPERFAMILY SSF52467 517 682 5.11E-59 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO40_00035 f280cc2f809487fcbf45a1a4dd6a4616 682 Gene3D G3DSA:3.40.50.1220 505 682 3.2E-74 T 14-10-2018 JO40_00035 f280cc2f809487fcbf45a1a4dd6a4616 682 SUPERFAMILY SSF52467 325 486 2.86E-58 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO40_00035 f280cc2f809487fcbf45a1a4dd6a4616 682 Gene3D G3DSA:3.40.50.1220 301 488 3.2E-73 T 14-10-2018 JO40_11840 d75a457f90aef6bb48f8fd197443053d 206 SUPERFAMILY SSF46894 119 192 5.67E-6 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JO40_11840 d75a457f90aef6bb48f8fd197443053d 206 Gene3D G3DSA:1.10.10.10 95 204 1.5E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_00970 fdd6c5241f6662de1bbc49b381371376 330 Pfam PF04055 Radical SAM superfamily 64 173 1.2E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_00970 fdd6c5241f6662de1bbc49b381371376 330 Gene3D G3DSA:3.20.20.70 54 191 1.0E-11 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_00970 fdd6c5241f6662de1bbc49b381371376 330 SUPERFAMILY SSF102114 65 176 4.97E-10 T 14-10-2018 JO40_00970 fdd6c5241f6662de1bbc49b381371376 330 Pfam PF13353 4Fe-4S single cluster domain 56 146 4.8E-5 T 14-10-2018 JO40_00970 fdd6c5241f6662de1bbc49b381371376 330 ProSitePatterns PS01087 Radical activating enzymes signature. 57 78 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 JO40_00970 fdd6c5241f6662de1bbc49b381371376 330 PIRSF PIRSF004869 1 326 1.7E-76 T 14-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted JO40_02770 29afa36e3d9af96d61c63c3a09a744d9 190 Pfam PF00364 Biotin-requiring enzyme 114 187 1.6E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JO40_02770 29afa36e3d9af96d61c63c3a09a744d9 190 Gene3D G3DSA:2.40.50.100 111 187 7.8E-30 T 14-10-2018 JO40_02770 29afa36e3d9af96d61c63c3a09a744d9 190 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 85 188 6.5E-37 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO40_02770 29afa36e3d9af96d61c63c3a09a744d9 190 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 149 162 2.1E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO40_02770 29afa36e3d9af96d61c63c3a09a744d9 190 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 2.1E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO40_02770 29afa36e3d9af96d61c63c3a09a744d9 190 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 134 148 2.1E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO40_02770 29afa36e3d9af96d61c63c3a09a744d9 190 SUPERFAMILY SSF51230 111 187 9.82E-24 T 14-10-2018 IPR011053 Single hybrid motif JO40_09670 b172190b7d58872aa00bcce7433b55fd 412 Gene3D G3DSA:1.10.3210.10 8 291 3.1E-65 T 14-10-2018 JO40_09670 b172190b7d58872aa00bcce7433b55fd 412 SUPERFAMILY SSF109604 6 308 7.07E-66 T 14-10-2018 JO40_09670 b172190b7d58872aa00bcce7433b55fd 412 SMART SM00471 53 187 2.1E-7 T 14-10-2018 IPR003607 HD/PDEase domain JO40_09670 b172190b7d58872aa00bcce7433b55fd 412 Pfam PF01966 HD domain 57 133 8.6E-7 T 14-10-2018 IPR006674 HD domain JO40_12310 e994c23b134efac38897d550c0c93e8b 186 Pfam PF13274 Protein of unknown function (DUF4065) 26 136 2.6E-25 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 JO40_08360 b0adf6529a87b1981ff3facff6dd76de 464 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 277 462 3.2E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_08360 b0adf6529a87b1981ff3facff6dd76de 464 Gene3D G3DSA:1.10.3720.10 250 462 1.5E-19 T 14-10-2018 IPR035906 MetI-like superfamily JO40_08360 b0adf6529a87b1981ff3facff6dd76de 464 SUPERFAMILY SSF161098 254 445 1.83E-23 T 14-10-2018 IPR035906 MetI-like superfamily JO40_03835 b50cb05e56ecc8b51b88d800db34295a 383 Gene3D G3DSA:3.40.50.1970 1 180 1.2E-22 T 14-10-2018 JO40_03835 b50cb05e56ecc8b51b88d800db34295a 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 3.6E-55 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JO40_03835 b50cb05e56ecc8b51b88d800db34295a 383 SUPERFAMILY SSF56796 4 382 6.15E-54 T 14-10-2018 JO40_03835 b50cb05e56ecc8b51b88d800db34295a 383 Gene3D G3DSA:1.20.1090.10 184 383 5.2E-22 T 14-10-2018 JO40_05475 b2ef2f633ac33561f0bbc3a45263fe21 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 215 1.6E-18 T 14-10-2018 JO40_05475 b2ef2f633ac33561f0bbc3a45263fe21 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 1.7E-43 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_12065 6dd58c4dc311f0958eb5820bdc8188ea 539 Pfam PF03772 Competence protein 265 524 6.3E-38 T 14-10-2018 IPR004477 ComEC/Rec2-related protein JO40_12065 6dd58c4dc311f0958eb5820bdc8188ea 539 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 286 458 3.1E-16 T 14-10-2018 IPR004477 ComEC/Rec2-related protein JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 SUPERFAMILY SSF46565 2 78 3.01E-30 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 Gene3D G3DSA:1.10.287.110 1 85 4.4E-31 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 SMART SM00271 2 60 3.2E-32 T 14-10-2018 IPR001623 DnaJ domain JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 PRINTS PR00625 DnaJ domain signature 40 60 1.2E-23 T 14-10-2018 IPR001623 DnaJ domain JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 PRINTS PR00625 DnaJ domain signature 23 38 1.2E-23 T 14-10-2018 IPR001623 DnaJ domain JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 PRINTS PR00625 DnaJ domain signature 60 79 1.2E-23 T 14-10-2018 IPR001623 DnaJ domain JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 PRINTS PR00625 DnaJ domain signature 5 23 1.2E-23 T 14-10-2018 IPR001623 DnaJ domain JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 14-10-2018 IPR018253 DnaJ domain, conserved site JO40_07705 d8b99c02950a0fbda86c3881d9bab7a0 170 Pfam PF00226 DnaJ domain 3 65 2.1E-29 T 14-10-2018 IPR001623 DnaJ domain JO40_01415 8ba743346f5c83e08fca3f0566cdf590 143 SMART SM00470 1 85 4.3E-20 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JO40_01415 8ba743346f5c83e08fca3f0566cdf590 143 Pfam PF02195 ParB-like nuclease domain 2 84 6.1E-15 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JO40_01415 8ba743346f5c83e08fca3f0566cdf590 143 SUPERFAMILY SSF110849 3 104 1.92E-15 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JO40_01415 8ba743346f5c83e08fca3f0566cdf590 143 Gene3D G3DSA:3.90.1530.30 13 69 3.2E-11 T 14-10-2018 JO40_09970 7a8cced1dee56778404cc61ae639c917 291 Pfam PF00483 Nucleotidyl transferase 2 241 2.6E-62 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JO40_09970 7a8cced1dee56778404cc61ae639c917 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 1.4E-136 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 JO40_09970 7a8cced1dee56778404cc61ae639c917 291 SUPERFAMILY SSF53448 1 276 9.01E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09970 7a8cced1dee56778404cc61ae639c917 291 Gene3D G3DSA:3.90.550.10 1 291 6.6E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_08790 e029202db831c8e2be499d6f5896cf83 318 Gene3D G3DSA:2.170.120.30 224 317 2.1E-8 T 14-10-2018 JO40_08790 e029202db831c8e2be499d6f5896cf83 318 Gene3D G3DSA:2.170.120.30 36 136 2.6E-14 T 14-10-2018 JO40_08790 e029202db831c8e2be499d6f5896cf83 318 Gene3D G3DSA:2.170.120.40 137 219 4.7E-10 T 14-10-2018 JO40_08790 e029202db831c8e2be499d6f5896cf83 318 Pfam PF07949 YbbR-like protein 136 213 1.0E-9 T 14-10-2018 IPR012505 YbbR-like JO40_08790 e029202db831c8e2be499d6f5896cf83 318 Pfam PF07949 YbbR-like protein 44 125 5.5E-9 T 14-10-2018 IPR012505 YbbR-like JO40_13395 983306e5381ac968aee3641415d06170 317 PIRSF PIRSF004486 1 311 2.0E-113 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO40_13395 983306e5381ac968aee3641415d06170 317 Gene3D G3DSA:3.40.50.150 5 306 2.3E-92 T 14-10-2018 JO40_13395 983306e5381ac968aee3641415d06170 317 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 310 34.57 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO40_13395 983306e5381ac968aee3641415d06170 317 Gene3D G3DSA:1.10.150.170 111 216 2.3E-92 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JO40_13395 983306e5381ac968aee3641415d06170 317 Pfam PF01795 MraW methylase family 4 310 7.7E-118 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO40_13395 983306e5381ac968aee3641415d06170 317 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 309 2.2E-101 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO40_13395 983306e5381ac968aee3641415d06170 317 SUPERFAMILY SSF81799 113 214 3.92E-33 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JO40_13395 983306e5381ac968aee3641415d06170 317 SUPERFAMILY SSF53335 5 310 6.88E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_06360 a7272f5cb275739d91dfb4d8b0a92db9 68 SMART SM01409 7 59 0.0067 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JO40_06360 a7272f5cb275739d91dfb4d8b0a92db9 68 Gene3D G3DSA:3.90.940.10 2 68 3.2E-5 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JO40_06360 a7272f5cb275739d91dfb4d8b0a92db9 68 SUPERFAMILY SSF63562 5 65 5.23E-8 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JO40_02485 5963d54d1bf4800a4ab24cf98660350e 344 Pfam PF13303 Phosphotransferase system, EIIC 23 342 8.6E-109 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JO40_03935 a97773a2da8daaddc4354bd24f9bbc6e 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 320 9.7E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_03935 a97773a2da8daaddc4354bd24f9bbc6e 320 Gene3D G3DSA:1.10.3720.10 85 315 3.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily JO40_03935 a97773a2da8daaddc4354bd24f9bbc6e 320 SUPERFAMILY SSF161098 91 302 4.19E-19 T 14-10-2018 IPR035906 MetI-like superfamily JO40_10795 21140bd0962b1a0fe8215ac974bd4d80 168 Gene3D G3DSA:2.40.50.140 1 123 1.1E-39 T 14-10-2018 JO40_10795 21140bd0962b1a0fe8215ac974bd4d80 168 PIRSF PIRSF002070 1 161 1.4E-33 T 14-10-2018 JO40_10795 21140bd0962b1a0fe8215ac974bd4d80 168 SUPERFAMILY SSF50249 4 168 5.48E-45 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO40_10795 21140bd0962b1a0fe8215ac974bd4d80 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 168 8.5E-46 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO40_10795 21140bd0962b1a0fe8215ac974bd4d80 168 Hamap MF_00984 Single-stranded DNA-binding protein. 4 109 31.464 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO40_10795 21140bd0962b1a0fe8215ac974bd4d80 168 Pfam PF00436 Single-strand binding protein family 4 104 6.7E-32 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JO40_10105 23fe7aa4ca2896a1bca639ba50907d39 176 Pfam PF08006 Protein of unknown function (DUF1700) 1 169 1.5E-19 T 14-10-2018 IPR012963 Protein of unknown function DUF1700 JO40_05570 64352c3c6e50495e65c09a9ea23af32a 222 SUPERFAMILY SSF143100 3 43 5.75E-6 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO40_05570 64352c3c6e50495e65c09a9ea23af32a 222 SUPERFAMILY SSF109854 125 215 8.7E-5 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO40_10445 7ea3c062aa2710faacfcb4948581f93c 103 SUPERFAMILY SSF141091 1 101 7.06E-34 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10445 7ea3c062aa2710faacfcb4948581f93c 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 2.6E-32 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10445 7ea3c062aa2710faacfcb4948581f93c 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_10445 7ea3c062aa2710faacfcb4948581f93c 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 23.756 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_10445 7ea3c062aa2710faacfcb4948581f93c 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 8.3E-35 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02200 6a2af9e98665edc9913eb36c5d529326 126 PIRSF PIRSF002131 1 126 1.7E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JO40_02200 6a2af9e98665edc9913eb36c5d529326 126 ProSitePatterns PS00054 Ribosomal protein S11 signature. 94 116 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site JO40_02200 6a2af9e98665edc9913eb36c5d529326 126 Pfam PF00411 Ribosomal protein S11 16 125 3.3E-44 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JO40_02200 6a2af9e98665edc9913eb36c5d529326 126 SUPERFAMILY SSF53137 12 126 4.25E-47 T 14-10-2018 JO40_02200 6a2af9e98665edc9913eb36c5d529326 126 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 126 31.38 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JO40_02200 6a2af9e98665edc9913eb36c5d529326 126 Gene3D G3DSA:3.30.420.80 1 126 4.2E-52 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02200 6a2af9e98665edc9913eb36c5d529326 126 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 7 122 7.7E-54 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO40_02180 db3c7f08a41d60782c1a4a50c5449eec 120 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 109 1.0E-37 T 14-10-2018 IPR004260 Pyrimidine dimer DNA glycosylase JO40_02180 db3c7f08a41d60782c1a4a50c5449eec 120 TIGRFAM TIGR02328 TIGR02328: conserved hypothetical protein 1 120 2.6E-62 T 14-10-2018 IPR012650 Conserved hypothetical protein CHP02328 JO40_08985 430fc21b40267602d84f69d4908f041a 444 Pfam PF01523 Putative modulator of DNA gyrase 27 304 2.8E-23 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JO40_08985 430fc21b40267602d84f69d4908f041a 444 SUPERFAMILY SSF111283 3 442 6.54E-68 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JO40_01775 e055db75a096da9b7b04dc559140a05b 707 PIRSF PIRSF008381 1 469 3.5E-77 T 14-10-2018 IPR011191 Uncharacterised protein family Treponema vWA JO40_01775 e055db75a096da9b7b04dc559140a05b 707 PIRSF PIRSF008381 507 707 2.0E-53 T 14-10-2018 IPR011191 Uncharacterised protein family Treponema vWA JO40_01775 e055db75a096da9b7b04dc559140a05b 707 Gene3D G3DSA:3.40.50.410 20 185 3.7E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_01775 e055db75a096da9b7b04dc559140a05b 707 SUPERFAMILY SSF53300 28 179 8.22E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_04615 0de4adff9c2da45f462d87c0ec7c9fb9 539 SUPERFAMILY SSF52540 32 221 6.9E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04615 0de4adff9c2da45f462d87c0ec7c9fb9 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 441 534 3.1E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_04615 0de4adff9c2da45f462d87c0ec7c9fb9 539 Pfam PF09820 Predicted AAA-ATPase 10 295 4.5E-104 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_08685 13dd7423ee3d5baeed603c77406eb2e1 180 Pfam PF13581 Histidine kinase-like ATPase domain 41 109 1.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO40_08685 13dd7423ee3d5baeed603c77406eb2e1 180 SUPERFAMILY SSF55874 46 107 3.67E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_08685 13dd7423ee3d5baeed603c77406eb2e1 180 Gene3D G3DSA:3.30.565.10 23 142 4.6E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO40_03385 fe980b5db503d0c34dbb386a2ce4e81c 895 Pfam PF02687 FtsX-like permease family 312 414 3.8E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 Pfam PF07728 AAA domain (dynein-related subfamily) 33 156 7.9E-9 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 SMART SM00327 441 625 2.1E-22 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 SUPERFAMILY SSF53300 441 612 2.5E-23 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 Gene3D G3DSA:3.40.50.300 5 167 2.1E-31 T 14-10-2018 JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 Gene3D G3DSA:3.40.50.410 434 626 1.5E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 Pfam PF13519 von Willebrand factor type A domain 444 550 4.7E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 SUPERFAMILY SSF52540 6 284 1.19E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06645 bd33dbc00282bc3a91290780faefdf05 639 Gene3D G3DSA:1.10.8.80 213 298 1.5E-14 T 14-10-2018 JO40_11675 0ec1e6040ca2d7b9b05651c13bb3400b 187 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 14 176 1.0E-52 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 JO40_11675 0ec1e6040ca2d7b9b05651c13bb3400b 187 SUPERFAMILY SSF117457 7 176 2.88E-64 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 JO40_11675 0ec1e6040ca2d7b9b05651c13bb3400b 187 Pfam PF05683 Fumarase C-terminus 10 176 2.2E-60 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 JO40_11675 0ec1e6040ca2d7b9b05651c13bb3400b 187 Gene3D G3DSA:3.20.130.10 1 176 6.8E-69 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 JO40_08145 82153bc5e48b29d210a45bc3deb6c65c 540 Pfam PF09820 Predicted AAA-ATPase 8 292 3.6E-102 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_08145 82153bc5e48b29d210a45bc3deb6c65c 540 Pfam PF08011 PD-(D/E)XK nuclease superfamily 440 524 1.1E-19 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_02135 32ce809e4858ac890a0d233d2db2ee18 309 Gene3D G3DSA:3.55.30.10 21 251 5.8E-53 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JO40_02135 32ce809e4858ac890a0d233d2db2ee18 309 PIRSF PIRSF005261 12 309 1.1E-78 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JO40_02135 32ce809e4858ac890a0d233d2db2ee18 309 Pfam PF01430 Hsp33 protein 21 297 6.1E-66 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JO40_02135 32ce809e4858ac890a0d233d2db2ee18 309 SUPERFAMILY SSF118352 250 305 7.46E-13 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JO40_02135 32ce809e4858ac890a0d233d2db2ee18 309 Gene3D G3DSA:3.90.1280.10 252 307 6.4E-12 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JO40_02135 32ce809e4858ac890a0d233d2db2ee18 309 SUPERFAMILY SSF64397 21 256 1.57E-50 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JO40_10120 cea3059a4cc46eb24e013cc668895a5e 247 Pfam PF04055 Radical SAM superfamily 21 196 1.0E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_10120 cea3059a4cc46eb24e013cc668895a5e 247 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 2 209 1.4E-43 T 14-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein JO40_10120 cea3059a4cc46eb24e013cc668895a5e 247 SUPERFAMILY SSF102114 21 201 4.58E-20 T 14-10-2018 JO40_10120 cea3059a4cc46eb24e013cc668895a5e 247 Pfam PF13353 4Fe-4S single cluster domain 17 135 4.0E-13 T 14-10-2018 JO40_10120 cea3059a4cc46eb24e013cc668895a5e 247 Gene3D G3DSA:3.20.20.70 1 238 1.3E-30 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_07025 906714ba85fb8defc18881e87635ce6b 138 Pfam PF00892 EamA-like transporter family 2 137 5.0E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_07025 906714ba85fb8defc18881e87635ce6b 138 SUPERFAMILY SSF103481 40 137 1.96E-14 T 14-10-2018 JO40_08495 cb3361a4895551516b032042e5c9441a 258 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 6 252 8.2E-38 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JO40_08495 cb3361a4895551516b032042e5c9441a 258 Pfam PF02654 Cobalamin-5-phosphate synthase 7 250 1.4E-46 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JO40_08495 cb3361a4895551516b032042e5c9441a 258 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 258 31.966 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JO40_06530 f6e557c3c139dab660c1b266cf9b92c6 90 SUPERFAMILY SSF143011 4 87 5.62E-13 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_06530 f6e557c3c139dab660c1b266cf9b92c6 90 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 38 89 1.6E-5 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO40_06530 f6e557c3c139dab660c1b266cf9b92c6 90 Gene3D G3DSA:3.30.2310.20 5 90 3.2E-13 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_00920 fcd16afb433890551f576795ac975d4b 256 SUPERFAMILY SSF56281 8 233 7.18E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_00920 fcd16afb433890551f576795ac975d4b 256 Gene3D G3DSA:3.60.15.10 7 244 6.9E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_00920 fcd16afb433890551f576795ac975d4b 256 SMART SM00849 35 226 7.5E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_00920 fcd16afb433890551f576795ac975d4b 256 Pfam PF00753 Metallo-beta-lactamase superfamily 33 226 2.3E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO40_10775 480c702e764fe2237a8035448f6b337e 204 Pfam PF01813 ATP synthase subunit D 9 192 1.5E-42 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_10775 480c702e764fe2237a8035448f6b337e 204 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 3 196 3.7E-46 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_11705 99bf4b3fdbda8284252918d19b8109be 230 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_11705 99bf4b3fdbda8284252918d19b8109be 230 SMART SM00382 28 214 4.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11705 99bf4b3fdbda8284252918d19b8109be 230 Pfam PF00005 ABC transporter 19 164 8.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_11705 99bf4b3fdbda8284252918d19b8109be 230 SUPERFAMILY SSF52540 3 224 8.88E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11705 99bf4b3fdbda8284252918d19b8109be 230 Gene3D G3DSA:3.40.50.300 1 216 5.8E-67 T 14-10-2018 JO40_08015 c6b63fc3fa2c1b70b7e8514b71243a53 375 Pfam PF01139 tRNA-splicing ligase RtcB 39 368 1.5E-68 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 JO40_08015 c6b63fc3fa2c1b70b7e8514b71243a53 375 SUPERFAMILY SSF103365 2 373 2.88E-101 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 JO40_08015 c6b63fc3fa2c1b70b7e8514b71243a53 375 Gene3D G3DSA:3.90.1860.10 1 373 5.2E-79 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 JO40_00770 30b186b15e36f236cb7104bfdff42353 192 SUPERFAMILY SSF160369 8 164 6.02E-47 T 14-10-2018 JO40_00770 30b186b15e36f236cb7104bfdff42353 192 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 10 160 0.001 T 14-10-2018 JO40_00770 30b186b15e36f236cb7104bfdff42353 192 Pfam PF00466 Ribosomal protein L10 9 105 1.4E-23 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 JO40_00770 30b186b15e36f236cb7104bfdff42353 192 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 7 165 24.456 T 14-10-2018 IPR022973 Ribosomal protein L10 JO40_00770 30b186b15e36f236cb7104bfdff42353 192 Gene3D G3DSA:3.30.70.1730 8 138 1.9E-37 T 14-10-2018 JO40_13400 811a3b03ea698f851e4d87b3b236ad2a 144 Gene3D G3DSA:2.40.330.20 1 143 6.4E-41 T 14-10-2018 IPR038619 MraZ superfamily JO40_13400 811a3b03ea698f851e4d87b3b236ad2a 144 Pfam PF02381 MraZ protein, putative antitoxin-like 2 66 1.3E-15 T 14-10-2018 IPR020603 MraZ domain JO40_13400 811a3b03ea698f851e4d87b3b236ad2a 144 Pfam PF02381 MraZ protein, putative antitoxin-like 74 138 6.3E-20 T 14-10-2018 IPR020603 MraZ domain JO40_13400 811a3b03ea698f851e4d87b3b236ad2a 144 SUPERFAMILY SSF89447 2 137 6.35E-39 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO40_13400 811a3b03ea698f851e4d87b3b236ad2a 144 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 144 40.829 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JO40_13400 811a3b03ea698f851e4d87b3b236ad2a 144 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 141 5.9E-35 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JO40_13400 811a3b03ea698f851e4d87b3b236ad2a 144 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 129 8.0E-70 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JO40_00815 87e96ee42434479d9378ab519f504e1c 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 3.8E-9 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_00815 87e96ee42434479d9378ab519f504e1c 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 331 3.8E-9 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_00815 87e96ee42434479d9378ab519f504e1c 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 379 3.8E-9 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_00815 87e96ee42434479d9378ab519f504e1c 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 3.8E-9 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_00815 87e96ee42434479d9378ab519f504e1c 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 351 366 3.8E-9 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JO40_00815 87e96ee42434479d9378ab519f504e1c 379 Pfam PF13437 HlyD family secretion protein 238 339 4.9E-13 T 14-10-2018 JO40_00815 87e96ee42434479d9378ab519f504e1c 379 Pfam PF13533 Biotin-lipoyl like 71 107 3.2E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JO40_08950 6b0141b403fc6d451e2637c1f3f3354a 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 321 8.0E-78 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 JO40_08950 6b0141b403fc6d451e2637c1f3f3354a 325 SUPERFAMILY SSF51556 1 324 2.24E-72 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO40_08950 6b0141b403fc6d451e2637c1f3f3354a 325 Gene3D G3DSA:3.20.20.140 1 325 3.8E-92 T 14-10-2018 JO40_10610 fc7cfdd2d3571eaafb973e1955b16c44 229 TIGRFAM TIGR04471 rSAM_mob_pairA: radical SAM mobile pair protein A 3 222 2.6E-127 T 14-10-2018 IPR031010 Radical SAM mobile pair protein A JO40_10610 fc7cfdd2d3571eaafb973e1955b16c44 229 Pfam PF07505 Protein of unknown function (DUF5131) 11 197 2.5E-26 T 14-10-2018 IPR011101 Protein of unknown function DUF5131 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 Gene3D G3DSA:3.90.226.10 4 305 9.3E-105 T 14-10-2018 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 303 42.994 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 SUPERFAMILY SSF52096 24 303 1.13E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 121 137 2.0E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 75 86 2.0E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 100 118 2.0E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 140 153 2.0E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 184 193 2.0E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.0E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 10 135 5.3E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_02785 a61fd34b54c19f3f91b3882b39229844 305 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 10 304 7.6E-121 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO40_04350 697bab41ef01d428cc22234a76acc81b 512 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 253 330 5.5E-7 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO40_04350 697bab41ef01d428cc22234a76acc81b 512 Gene3D G3DSA:3.40.47.10 171 389 2.4E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO40_04350 697bab41ef01d428cc22234a76acc81b 512 SUPERFAMILY SSF53901 182 289 1.32E-9 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO40_04350 697bab41ef01d428cc22234a76acc81b 512 PIRSF PIRSF037559 1 510 2.0E-275 T 14-10-2018 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta JO40_02605 d4f934da978194d7d4bb4aa8de31929f 370 SUPERFAMILY SSF56436 94 368 1.06E-50 T 14-10-2018 IPR016187 C-type lectin fold JO40_02605 d4f934da978194d7d4bb4aa8de31929f 370 Gene3D G3DSA:3.90.1580.10 78 370 9.1E-76 T 14-10-2018 JO40_02605 d4f934da978194d7d4bb4aa8de31929f 370 Pfam PF03781 Sulfatase-modifying factor enzyme 1 95 367 7.1E-42 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO40_11140 d3cbab18ee0518e6c72b8c6f1f503946 385 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 2 381 4.0E-145 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 JO40_04595 4b050459f8c6e866f450a42efa87e4e7 171 PIRSF PIRSF015617 1 171 1.1E-61 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JO40_04595 4b050459f8c6e866f450a42efa87e4e7 171 SUPERFAMILY SSF52540 2 170 7.61E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04595 4b050459f8c6e866f450a42efa87e4e7 171 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 2 170 3.0E-52 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JO40_04595 4b050459f8c6e866f450a42efa87e4e7 171 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 3 170 1.1E-62 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JO40_04595 4b050459f8c6e866f450a42efa87e4e7 171 Gene3D G3DSA:3.40.50.300 1 170 4.9E-62 T 14-10-2018 JO40_07445 a62a01299a8930862b683deca66fed0c 542 Pfam PF09820 Predicted AAA-ATPase 9 294 2.1E-99 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_07445 a62a01299a8930862b683deca66fed0c 542 Pfam PF08011 PD-(D/E)XK nuclease superfamily 444 537 8.7E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_03445 29d423c7ce9df1211a3d0c832c2b37d8 222 PIRSF PIRSF036427 1 221 7.8E-45 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 JO40_03445 29d423c7ce9df1211a3d0c832c2b37d8 222 Gene3D G3DSA:3.30.950.10 123 221 1.0E-7 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JO40_03445 29d423c7ce9df1211a3d0c832c2b37d8 222 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JO40_03445 29d423c7ce9df1211a3d0c832c2b37d8 222 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 196 2.0E-34 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JO40_03445 29d423c7ce9df1211a3d0c832c2b37d8 222 SUPERFAMILY SSF53790 5 218 8.24E-34 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JO40_03445 29d423c7ce9df1211a3d0c832c2b37d8 222 Gene3D G3DSA:3.40.1010.10 2 121 5.8E-25 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JO40_03220 3842a8ecf6356c5fa707b12895d4593a 202 Gene3D G3DSA:1.10.357.10 3 191 5.4E-18 T 14-10-2018 JO40_03220 3842a8ecf6356c5fa707b12895d4593a 202 SUPERFAMILY SSF46689 2 78 6.67E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_03220 3842a8ecf6356c5fa707b12895d4593a 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_03220 3842a8ecf6356c5fa707b12895d4593a 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_03220 3842a8ecf6356c5fa707b12895d4593a 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_00460 b2756fa7342e1bdf22dd34d58ea94783 250 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 216 3.2E-17 T 14-10-2018 JO40_00460 b2756fa7342e1bdf22dd34d58ea94783 250 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 250 2.1E-42 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_07160 89540ba9486f16b2c954bdaa4a67021c 195 Gene3D G3DSA:3.40.50.360 26 194 6.5E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_07160 89540ba9486f16b2c954bdaa4a67021c 195 Pfam PF12682 Flavodoxin 36 193 7.9E-34 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JO40_07160 89540ba9486f16b2c954bdaa4a67021c 195 ProSitePatterns PS00201 Flavodoxin signature. 39 55 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JO40_07160 89540ba9486f16b2c954bdaa4a67021c 195 SUPERFAMILY SSF52218 35 177 2.66E-23 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_01925 31436df2ac1d5fc6e63215702470dc05 321 Gene3D G3DSA:1.10.3720.10 86 309 9.4E-24 T 14-10-2018 IPR035906 MetI-like superfamily JO40_01925 31436df2ac1d5fc6e63215702470dc05 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 317 4.6E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_01925 31436df2ac1d5fc6e63215702470dc05 321 SUPERFAMILY SSF161098 92 300 1.44E-22 T 14-10-2018 IPR035906 MetI-like superfamily JO40_07660 c76efb009fb14025a343669d7cc61414 406 Pfam PF07075 Protein of unknown function (DUF1343) 50 406 9.0E-138 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JO40_07660 c76efb009fb14025a343669d7cc61414 406 Gene3D G3DSA:3.40.50.12170 34 406 4.1E-141 T 14-10-2018 JO40_07660 c76efb009fb14025a343669d7cc61414 406 PIRSF PIRSF016719 1 406 1.2E-151 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JO40_07660 c76efb009fb14025a343669d7cc61414 406 Gene3D G3DSA:3.90.1150.140 243 391 4.1E-141 T 14-10-2018 JO40_00925 784cceef4f09a6b3620c9b60a593e7aa 519 SUPERFAMILY SSF51735 3 276 3.4E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_00925 784cceef4f09a6b3620c9b60a593e7aa 519 Gene3D G3DSA:3.40.50.720 1 311 3.4E-34 T 14-10-2018 JO40_00925 784cceef4f09a6b3620c9b60a593e7aa 519 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 172 4.5E-18 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JO40_10735 91fceae1f58991bf3f3b6526e8245a2e 194 Gene3D G3DSA:1.10.3210.10 15 171 7.8E-17 T 14-10-2018 JO40_10735 91fceae1f58991bf3f3b6526e8245a2e 194 SUPERFAMILY SSF109604 19 155 1.84E-21 T 14-10-2018 JO40_10735 91fceae1f58991bf3f3b6526e8245a2e 194 SMART SM00471 30 137 0.0047 T 14-10-2018 IPR003607 HD/PDEase domain JO40_03450 32d516cf3b6ef87471a52f21b759b99e 429 SUPERFAMILY SSF52317 231 343 2.06E-12 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO40_03450 32d516cf3b6ef87471a52f21b759b99e 429 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 183 1.1E-11 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JO40_03450 32d516cf3b6ef87471a52f21b759b99e 429 SUPERFAMILY SSF52540 1 188 5.98E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03450 32d516cf3b6ef87471a52f21b759b99e 429 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 239 409 1.5E-15 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 JO40_03450 32d516cf3b6ef87471a52f21b759b99e 429 Gene3D G3DSA:3.40.50.300 66 188 1.5E-7 T 14-10-2018 JO40_03450 32d516cf3b6ef87471a52f21b759b99e 429 Gene3D G3DSA:3.40.50.300 1 57 7.0E-6 T 14-10-2018 JO40_12290 46ba9dd5cb9982d2c5e843c872c4aa92 276 Pfam PF02591 C4-type zinc ribbon domain 199 231 1.1E-13 T 14-10-2018 IPR003743 C4-type zinc ribbon domain JO40_09655 1f0a99c015c4c56d617c5843a6dcdebe 435 Pfam PF08239 Bacterial SH3 domain 109 172 3.8E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type JO40_09655 1f0a99c015c4c56d617c5843a6dcdebe 435 Gene3D G3DSA:2.30.30.40 92 173 1.5E-11 T 14-10-2018 JO40_13315 3377770f1434986a40c17f9e49c0dd53 151 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO40_13315 3377770f1434986a40c17f9e49c0dd53 151 Pfam PF00460 Flagella basal body rod protein 7 32 2.3E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO40_13315 3377770f1434986a40c17f9e49c0dd53 151 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 151 5.4E-46 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 JO40_13315 3377770f1434986a40c17f9e49c0dd53 151 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 105 148 8.6E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO40_10305 40fa0b1fc14de9adc03d6bb40573e667 102 Gene3D G3DSA:3.30.460.10 4 97 2.6E-22 T 14-10-2018 JO40_10305 40fa0b1fc14de9adc03d6bb40573e667 102 Pfam PF01909 Nucleotidyltransferase domain 18 96 2.7E-11 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JO40_10305 40fa0b1fc14de9adc03d6bb40573e667 102 SUPERFAMILY SSF81301 4 98 4.03E-20 T 14-10-2018 JO40_03165 304e1f17a2aa875db452fdee451d8551 325 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 12 140 1.6E-43 T 14-10-2018 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019 JO40_03165 304e1f17a2aa875db452fdee451d8551 325 Pfam PF16169 Domain of unknown function (DUF4872) 152 322 1.0E-42 T 14-10-2018 IPR032369 Domain of unknown function DUF4872 JO40_08655 ca4f22f7922f03317cc0fd5ad07418db 443 SUPERFAMILY SSF52058 130 368 1.94E-26 T 14-10-2018 JO40_08655 ca4f22f7922f03317cc0fd5ad07418db 443 Gene3D G3DSA:3.80.10.10 96 391 8.2E-42 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_07295 9166224673c68dd3776b1fa4eb293d8a 291 Gene3D G3DSA:1.10.150.650 95 167 8.8E-81 T 14-10-2018 JO40_07295 9166224673c68dd3776b1fa4eb293d8a 291 Gene3D G3DSA:3.20.20.140 2 248 8.8E-81 T 14-10-2018 JO40_07295 9166224673c68dd3776b1fa4eb293d8a 291 Pfam PF02811 PHP domain 3 113 2.8E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 JO40_07295 9166224673c68dd3776b1fa4eb293d8a 291 SMART SM00481 2 67 3.6E-20 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JO40_07295 9166224673c68dd3776b1fa4eb293d8a 291 SUPERFAMILY SSF89550 1 255 1.44E-43 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JO40_09010 e27e35fdfc88e7f8bbee94ed39e2ddcb 522 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 26 517 3.7E-133 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JO40_09010 e27e35fdfc88e7f8bbee94ed39e2ddcb 522 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 63 518 2.2E-141 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JO40_13005 4974cc90c1244586add64f9bc714fa97 210 Pfam PF01386 Ribosomal L25p family 6 92 1.2E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO40_13005 4974cc90c1244586add64f9bc714fa97 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 26.995 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO40_13005 4974cc90c1244586add64f9bc714fa97 210 SUPERFAMILY SSF50715 11 180 8.37E-49 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_13005 4974cc90c1244586add64f9bc714fa97 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 179 5.3E-59 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO40_13005 4974cc90c1244586add64f9bc714fa97 210 Gene3D G3DSA:2.170.120.20 98 189 4.3E-26 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal JO40_13005 4974cc90c1244586add64f9bc714fa97 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 95 3.0E-40 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO40_13005 4974cc90c1244586add64f9bc714fa97 210 Gene3D G3DSA:2.40.240.10 4 95 9.5E-25 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO40_13005 4974cc90c1244586add64f9bc714fa97 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 180 6.9E-25 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain JO40_10115 9baf040c75c1c68d43fe38f63231a23d 104 Gene3D G3DSA:1.10.10.10 3 103 8.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_10115 9baf040c75c1c68d43fe38f63231a23d 104 Pfam PF03551 Transcriptional regulator PadR-like family 14 80 7.5E-19 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal JO40_10115 9baf040c75c1c68d43fe38f63231a23d 104 SUPERFAMILY SSF46785 1 101 3.13E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_06990 4679b9d7030c5904c9a49cdcbb55014a 159 Pfam PF00877 NlpC/P60 family 42 146 5.1E-25 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JO40_06990 4679b9d7030c5904c9a49cdcbb55014a 159 SUPERFAMILY SSF54001 25 152 1.34E-35 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO40_06990 4679b9d7030c5904c9a49cdcbb55014a 159 Gene3D G3DSA:3.90.1720.10 28 156 4.1E-38 T 14-10-2018 JO40_07670 eb8c6389902a635edc52b0a3491ad4f9 182 SUPERFAMILY SSF50475 32 181 3.38E-15 T 14-10-2018 JO40_07670 eb8c6389902a635edc52b0a3491ad4f9 182 Gene3D G3DSA:2.30.110.10 21 182 1.0E-18 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO40_04590 c1238ab2c406aa5d73c5addb8dec2f76 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 235 9.5E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_04590 c1238ab2c406aa5d73c5addb8dec2f76 243 SUPERFAMILY SSF161098 57 237 4.71E-19 T 14-10-2018 IPR035906 MetI-like superfamily JO40_04590 c1238ab2c406aa5d73c5addb8dec2f76 243 Gene3D G3DSA:1.10.3720.10 58 242 7.0E-17 T 14-10-2018 IPR035906 MetI-like superfamily JO40_06040 84bb0d0609430cf12171adf908f9e857 148 Pfam PF00583 Acetyltransferase (GNAT) family 32 127 9.4E-17 T 14-10-2018 IPR000182 GNAT domain JO40_06040 84bb0d0609430cf12171adf908f9e857 148 Gene3D G3DSA:3.40.630.30 1 138 3.0E-35 T 14-10-2018 JO40_06040 84bb0d0609430cf12171adf908f9e857 148 PIRSF PIRSF037663 1 146 1.9E-12 T 14-10-2018 IPR017255 Acetyltransferase, GNAT, predicted JO40_06040 84bb0d0609430cf12171adf908f9e857 148 SUPERFAMILY SSF55729 1 132 6.87E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_00240 de83d524e6971bcbe34c06fc990c21a7 86 Pfam PF11823 Protein of unknown function (DUF3343) 3 55 1.3E-12 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 JO40_06250 592159991de2dd7ff89ded4a528a2335 447 PIRSF PIRSF006060 1 447 4.4E-74 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JO40_06250 592159991de2dd7ff89ded4a528a2335 447 Gene3D G3DSA:1.20.1740.10 3 447 1.4E-65 T 14-10-2018 JO40_06250 592159991de2dd7ff89ded4a528a2335 447 Pfam PF13520 Amino acid permease 10 420 1.2E-34 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JO40_03705 78c17538b3e7341a97517b830b37d989 759 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 557 678 1.4E-23 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_03705 78c17538b3e7341a97517b830b37d989 759 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 308 431 2.8E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO40_03705 78c17538b3e7341a97517b830b37d989 759 Gene3D G3DSA:3.40.50.300 283 433 2.5E-15 T 14-10-2018 JO40_03705 78c17538b3e7341a97517b830b37d989 759 SUPERFAMILY SSF52540 530 710 7.39E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03705 78c17538b3e7341a97517b830b37d989 759 Gene3D G3DSA:3.40.50.300 508 696 1.9E-36 T 14-10-2018 JO40_03705 78c17538b3e7341a97517b830b37d989 759 SUPERFAMILY SSF52540 303 498 1.55E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03705 78c17538b3e7341a97517b830b37d989 759 SMART SM00382 304 435 1.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03705 78c17538b3e7341a97517b830b37d989 759 SMART SM00382 553 682 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_00435 3117284e70ad277a23c9b81772c9a3ad 453 Pfam PF03553 Na+/H+ antiporter family 235 427 6.1E-12 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JO40_00435 3117284e70ad277a23c9b81772c9a3ad 453 Pfam PF03553 Na+/H+ antiporter family 48 219 1.0E-16 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JO40_02525 2247521701ff9b9748be9260efab36ac 203 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 183 3.5E-47 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JO40_02525 2247521701ff9b9748be9260efab36ac 203 Gene3D G3DSA:3.40.50.1470 1 197 1.1E-54 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JO40_02525 2247521701ff9b9748be9260efab36ac 203 SUPERFAMILY SSF53178 2 186 4.45E-51 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JO40_02525 2247521701ff9b9748be9260efab36ac 203 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 188 30.549 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JO40_02525 2247521701ff9b9748be9260efab36ac 203 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JO40_02525 2247521701ff9b9748be9260efab36ac 203 Pfam PF01195 Peptidyl-tRNA hydrolase 4 190 2.1E-46 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JO40_07575 f434c88d7d96366a2e3a70b5797e4611 292 Pfam PF04754 Putative transposase, YhgA-like 67 186 2.3E-6 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like JO40_05700 95a297b541e199f96bec37753a36c56b 234 Pfam PF02361 Cobalt transport protein 4 192 1.1E-15 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO40_08585 42cf50d002d8a3804b41579a7771de51 335 Gene3D G3DSA:3.40.50.10440 12 184 1.3E-54 T 14-10-2018 JO40_08585 42cf50d002d8a3804b41579a7771de51 335 Gene3D G3DSA:3.30.1180.20 185 330 3.1E-47 T 14-10-2018 JO40_08585 42cf50d002d8a3804b41579a7771de51 335 SUPERFAMILY SSF82549 1 330 6.54E-112 T 14-10-2018 JO40_08585 42cf50d002d8a3804b41579a7771de51 335 Pfam PF02733 Dak1 domain 17 327 2.3E-113 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JO40_09020 824a360d063ff2f022ef9a176957c884 474 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 100 115 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 PRINTS PR00175 Sodium/alanine symporter signature 431 451 4.7E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 PRINTS PR00175 Sodium/alanine symporter signature 321 339 4.7E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 PRINTS PR00175 Sodium/alanine symporter signature 372 394 4.7E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 PRINTS PR00175 Sodium/alanine symporter signature 198 216 4.7E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 PRINTS PR00175 Sodium/alanine symporter signature 226 245 4.7E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 PRINTS PR00175 Sodium/alanine symporter signature 100 122 4.7E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 Pfam PF01235 Sodium:alanine symporter family 63 465 1.9E-145 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_09020 824a360d063ff2f022ef9a176957c884 474 TIGRFAM TIGR00835 agcS: amino acid carrier protein 25 462 6.6E-143 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO40_12665 8dda2a9afb3236d11df87b8bde74db6a 283 Gene3D G3DSA:1.25.40.10 69 282 7.0E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12665 8dda2a9afb3236d11df87b8bde74db6a 283 SUPERFAMILY SSF81901 191 260 3.79E-7 T 14-10-2018 JO40_12705 588510eb8154cfbb49e5508f1ddf4114 1154 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 830 935 1.3E-17 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 JO40_12705 588510eb8154cfbb49e5508f1ddf4114 1154 Gene3D G3DSA:2.180.10.10 636 935 8.6E-51 T 14-10-2018 JO40_12705 588510eb8154cfbb49e5508f1ddf4114 1154 Gene3D G3DSA:2.180.10.10 255 635 3.4E-40 T 14-10-2018 JO40_09390 bac143f882624452f120f921249758af 263 Pfam PF06182 ABC-2 family transporter protein 52 262 2.7E-15 T 14-10-2018 IPR010390 Protein of unknown function DUF990 JO40_01820 408ecacdfdb59b69ae7a23049dfa9c1e 241 SUPERFAMILY SSF52540 6 221 1.2E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_01820 408ecacdfdb59b69ae7a23049dfa9c1e 241 SMART SM00382 28 210 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_01820 408ecacdfdb59b69ae7a23049dfa9c1e 241 Gene3D G3DSA:3.40.50.300 1 238 2.1E-66 T 14-10-2018 JO40_01820 408ecacdfdb59b69ae7a23049dfa9c1e 241 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_01820 408ecacdfdb59b69ae7a23049dfa9c1e 241 Pfam PF00005 ABC transporter 19 162 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_11940 dee7527db1ada7b07e5b1404ec3337b6 122 Gene3D G3DSA:3.30.160.170 20 118 2.3E-18 T 14-10-2018 IPR035924 FlaG-like superfamily JO40_11940 dee7527db1ada7b07e5b1404ec3337b6 122 Pfam PF03646 FlaG protein 27 120 1.5E-26 T 14-10-2018 IPR005186 FlaG protein JO40_11940 dee7527db1ada7b07e5b1404ec3337b6 122 SUPERFAMILY SSF160214 16 121 3.92E-27 T 14-10-2018 IPR035924 FlaG-like superfamily JO40_02650 2d7cd1e15a90078f01e1a5003293aae0 301 Pfam PF04754 Putative transposase, YhgA-like 70 141 1.4E-6 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like JO40_02650 2d7cd1e15a90078f01e1a5003293aae0 301 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 299 1.4E-16 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_02280 6b7bfbc50662ef31ebd4958b72cf9197 118 Gene3D G3DSA:3.90.470.10 4 118 4.8E-37 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_02280 6b7bfbc50662ef31ebd4958b72cf9197 118 ProSitePatterns PS00464 Ribosomal protein L22 signature. 88 112 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO40_02280 6b7bfbc50662ef31ebd4958b72cf9197 118 Pfam PF00237 Ribosomal protein L22p/L17e 11 112 4.3E-28 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 JO40_02280 6b7bfbc50662ef31ebd4958b72cf9197 118 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 112 2.1E-26 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02280 6b7bfbc50662ef31ebd4958b72cf9197 118 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 115 23.298 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_02280 6b7bfbc50662ef31ebd4958b72cf9197 118 SUPERFAMILY SSF54843 6 115 4.84E-34 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JO40_06600 5c7c31ff776c8b361021655233b360d0 218 Gene3D G3DSA:1.10.150.240 17 86 1.4E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JO40_06600 5c7c31ff776c8b361021655233b360d0 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 2.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_06600 5c7c31ff776c8b361021655233b360d0 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_06600 5c7c31ff776c8b361021655233b360d0 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_06600 5c7c31ff776c8b361021655233b360d0 218 Gene3D G3DSA:3.40.50.1000 5 208 1.4E-52 T 14-10-2018 IPR023214 HAD superfamily JO40_06600 5c7c31ff776c8b361021655233b360d0 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 187 1.7E-34 T 14-10-2018 JO40_06600 5c7c31ff776c8b361021655233b360d0 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 181 5.7E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_06600 5c7c31ff776c8b361021655233b360d0 218 SUPERFAMILY SSF56784 1 215 6.83E-55 T 14-10-2018 IPR036412 HAD-like superfamily JO40_06905 b45ec2a34d3d3d4d025e4245b3739c35 227 PRINTS PR01837 MgtC/SapB protein signature 18 37 2.9E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JO40_06905 b45ec2a34d3d3d4d025e4245b3739c35 227 PRINTS PR01837 MgtC/SapB protein signature 37 55 2.9E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JO40_06905 b45ec2a34d3d3d4d025e4245b3739c35 227 PRINTS PR01837 MgtC/SapB protein signature 93 117 2.9E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JO40_06905 b45ec2a34d3d3d4d025e4245b3739c35 227 PRINTS PR01837 MgtC/SapB protein signature 66 88 2.9E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JO40_06905 b45ec2a34d3d3d4d025e4245b3739c35 227 Pfam PF02308 MgtC family 15 138 1.2E-36 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JO40_06385 d84edd9f4fc61d80684df4e781dd0e90 403 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 392 9.5E-36 T 14-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola JO40_07990 6d83ef081845bbe4e448c58c56097593 229 Pfam PF09335 SNARE associated Golgi protein 74 191 9.5E-16 T 14-10-2018 IPR032816 SNARE associated Golgi protein JO40_02445 085cdb522d5c4992f782c2bb6b839ddb 563 Pfam PF05262 Borrelia P83/100 protein 25 520 1.1E-223 T 14-10-2018 IPR007926 Borrelia P83100 JO40_03910 576324bd01fb0a9bfa6e8b09b367dafd 463 Pfam PF00246 Zinc carboxypeptidase 25 193 3.1E-11 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 JO40_03910 576324bd01fb0a9bfa6e8b09b367dafd 463 Gene3D G3DSA:3.40.630.10 15 284 1.9E-23 T 14-10-2018 JO40_03910 576324bd01fb0a9bfa6e8b09b367dafd 463 SUPERFAMILY SSF53187 13 284 2.38E-28 T 14-10-2018 JO40_10200 47d2cde0cd0d6baf95e66a54a26a6d82 219 Gene3D G3DSA:1.20.120.450 1 145 2.1E-8 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO40_11435 7cc182e990467f141111ea1191979dff 482 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 3 477 56.391 T 14-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 JO40_11435 7cc182e990467f141111ea1191979dff 482 Gene3D G3DSA:3.40.640.10 77 308 5.4E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_11435 7cc182e990467f141111ea1191979dff 482 Pfam PF00266 Aminotransferase class-V 152 271 2.9E-8 T 14-10-2018 IPR000192 Aminotransferase class V domain JO40_11435 7cc182e990467f141111ea1191979dff 482 Gene3D G3DSA:3.90.1150.10 330 462 6.8E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_11435 7cc182e990467f141111ea1191979dff 482 SUPERFAMILY SSF53383 31 475 4.39E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_10150 ce39b15b94c6d2c563a7a267335ee514 68 SUPERFAMILY SSF47598 6 54 3.93E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO40_08575 6beb2c76ac801b8e4065378426302fc6 169 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 28 159 9.4E-16 T 14-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase JO40_12810 72bed4dc03587e2530fbc820fff77c29 357 Gene3D G3DSA:3.30.590.10 5 258 3.2E-40 T 14-10-2018 JO40_12810 72bed4dc03587e2530fbc820fff77c29 357 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 47 246 2.5E-39 T 14-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 JO40_12810 72bed4dc03587e2530fbc820fff77c29 357 SUPERFAMILY SSF55931 7 265 1.43E-51 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JO40_07495 703b32e9571f0cda1c0cb4030e1f957f 493 Gene3D G3DSA:1.10.3210.10 212 490 1.4E-56 T 14-10-2018 JO40_07495 703b32e9571f0cda1c0cb4030e1f957f 493 Pfam PF08668 HDOD domain 238 430 1.4E-54 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JO40_07495 703b32e9571f0cda1c0cb4030e1f957f 493 SUPERFAMILY SSF109604 230 479 9.74E-53 T 14-10-2018 JO40_05210 bc3046007ec73efca0f6693f1cabc844 537 Pfam PF09820 Predicted AAA-ATPase 8 293 6.1E-100 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_05210 bc3046007ec73efca0f6693f1cabc844 537 Gene3D G3DSA:3.40.50.300 20 222 1.5E-5 T 14-10-2018 JO40_05210 bc3046007ec73efca0f6693f1cabc844 537 Pfam PF08011 PD-(D/E)XK nuclease superfamily 439 532 1.0E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_00455 ec271c1c11c554ee7b7f05358b13837c 315 Gene3D G3DSA:3.90.1580.10 45 315 1.0E-97 T 14-10-2018 JO40_00455 ec271c1c11c554ee7b7f05358b13837c 315 SUPERFAMILY SSF56436 69 314 1.15E-49 T 14-10-2018 IPR016187 C-type lectin fold JO40_00455 ec271c1c11c554ee7b7f05358b13837c 315 Pfam PF03781 Sulfatase-modifying factor enzyme 1 73 312 1.1E-36 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO40_03410 31399ac56c7b3ad33dbd68fe5e6788dc 329 Gene3D G3DSA:3.40.50.300 1 306 5.9E-60 T 14-10-2018 JO40_03410 31399ac56c7b3ad33dbd68fe5e6788dc 329 SMART SM00382 47 232 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03410 31399ac56c7b3ad33dbd68fe5e6788dc 329 SUPERFAMILY SSF52540 30 249 1.11E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03410 31399ac56c7b3ad33dbd68fe5e6788dc 329 Pfam PF00005 ABC transporter 38 182 2.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08690 dd37db30e86a3208720ab4b5ad15f99d 112 Pfam PF01740 STAS domain 4 106 1.7E-18 T 14-10-2018 IPR002645 STAS domain JO40_08690 dd37db30e86a3208720ab4b5ad15f99d 112 Gene3D G3DSA:3.30.750.24 1 112 6.5E-26 T 14-10-2018 IPR036513 STAS domain superfamily JO40_08690 dd37db30e86a3208720ab4b5ad15f99d 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 2.2E-28 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 JO40_08690 dd37db30e86a3208720ab4b5ad15f99d 112 SUPERFAMILY SSF52091 1 110 5.3E-27 T 14-10-2018 IPR036513 STAS domain superfamily JO40_10155 9f07e3d04ba19d168e7f645af998e4bb 250 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_10155 9f07e3d04ba19d168e7f645af998e4bb 250 Gene3D G3DSA:3.40.50.300 1 250 3.9E-58 T 14-10-2018 JO40_10155 9f07e3d04ba19d168e7f645af998e4bb 250 Pfam PF00005 ABC transporter 24 193 6.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_10155 9f07e3d04ba19d168e7f645af998e4bb 250 SUPERFAMILY SSF52540 3 245 3.17E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_10155 9f07e3d04ba19d168e7f645af998e4bb 250 SMART SM00382 32 241 2.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06075 f96f93310675c5eb5a89e2b101845b99 243 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 243 7.8E-42 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_06075 f96f93310675c5eb5a89e2b101845b99 243 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 212 1.2E-18 T 14-10-2018 JO40_02925 86d3cf2ae9059d5224a9f444f19cf14f 488 Gene3D G3DSA:3.30.565.60 230 387 1.6E-14 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily JO40_02925 86d3cf2ae9059d5224a9f444f19cf14f 488 Gene3D G3DSA:3.30.950.30 2 134 3.6E-21 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily JO40_02925 86d3cf2ae9059d5224a9f444f19cf14f 488 Pfam PF04326 Putative DNA-binding domain 14 111 4.4E-14 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 JO40_10870 09c73ba650747e204dbc0420abbb3fd0 168 Gene3D G3DSA:3.30.1330.60 20 168 8.0E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_10870 09c73ba650747e204dbc0420abbb3fd0 168 Pfam PF00691 OmpA family 64 160 2.5E-18 T 14-10-2018 IPR006665 OmpA-like domain JO40_10870 09c73ba650747e204dbc0420abbb3fd0 168 SUPERFAMILY SSF103088 55 164 3.66E-19 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_05975 62554def4f051c427b70ec38ce9fc224 152 Pfam PF00583 Acetyltransferase (GNAT) family 32 129 8.9E-13 T 14-10-2018 IPR000182 GNAT domain JO40_05975 62554def4f051c427b70ec38ce9fc224 152 SUPERFAMILY SSF55729 2 151 5.86E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_05975 62554def4f051c427b70ec38ce9fc224 152 Gene3D G3DSA:3.40.630.30 3 151 1.3E-21 T 14-10-2018 JO40_09575 fdab33bb82bd2ffd442bd80682fce5eb 162 Pfam PF02681 Divergent PAP2 family 16 153 3.4E-41 T 14-10-2018 IPR003832 Protein of unknown function DUF212 JO40_12955 ed6ed9fbf6734ed6c08e7933c0edf29c 255 Pfam PF06044 Dam-replacing family 2 254 1.2E-117 T 14-10-2018 IPR010324 Dam-replacing JO40_12955 ed6ed9fbf6734ed6c08e7933c0edf29c 255 Gene3D G3DSA:3.40.210.30 1 165 9.7E-65 T 14-10-2018 JO40_12955 ed6ed9fbf6734ed6c08e7933c0edf29c 255 Gene3D G3DSA:1.10.10.10 166 255 2.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_00645 ca735e59e18cd69c6bd6efe63a79ec69 342 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 317 5.7E-41 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JO40_00645 ca735e59e18cd69c6bd6efe63a79ec69 342 SUPERFAMILY SSF111384 258 325 4.71E-5 T 14-10-2018 JO40_00645 ca735e59e18cd69c6bd6efe63a79ec69 342 Gene3D G3DSA:3.40.190.170 16 341 6.3E-54 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JO40_03160 d09d61ddc6b712f02fcaa781d624a2cf 172 Gene3D G3DSA:1.10.10.10 1 101 1.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_03160 d09d61ddc6b712f02fcaa781d624a2cf 172 Pfam PF03551 Transcriptional regulator PadR-like family 10 81 1.1E-9 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal JO40_03160 d09d61ddc6b712f02fcaa781d624a2cf 172 SUPERFAMILY SSF46785 6 164 5.4E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_06440 e9802086978790bf9b4acf73683f55b0 332 Pfam PF13181 Tetratricopeptide repeat 104 133 5.0E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 Gene3D G3DSA:1.25.40.10 133 246 2.7E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 137 170 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 35 68 28.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 205 238 460.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 274 307 1.4E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 240 273 0.046 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 103 136 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 69 102 9.3E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SMART SM00028 171 204 9.8E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 SUPERFAMILY SSF48452 34 324 7.21E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 Pfam PF13432 Tetratricopeptide repeat 143 204 2.1E-4 T 14-10-2018 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 Gene3D G3DSA:1.25.40.10 21 132 4.2E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 Gene3D G3DSA:1.25.40.10 247 332 3.3E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 Pfam PF00515 Tetratricopeptide repeat 274 302 1.2E-6 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06440 e9802086978790bf9b4acf73683f55b0 332 Pfam PF00515 Tetratricopeptide repeat 70 101 8.0E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06085 0273a5760482f18a973a26333d25e276 236 SUPERFAMILY SSF52540 3 188 1.7E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06085 0273a5760482f18a973a26333d25e276 236 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 163 5.7E-10 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JO40_06085 0273a5760482f18a973a26333d25e276 236 PIRSF PIRSF005624 1 198 8.1E-50 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 JO40_06085 0273a5760482f18a973a26333d25e276 236 Gene3D G3DSA:3.40.50.300 1 192 1.1E-22 T 14-10-2018 JO40_00090 5350725a0594d49c2068ba8d8426ec7c 235 Pfam PF13646 HEAT repeats 104 155 6.1E-9 T 14-10-2018 JO40_00090 5350725a0594d49c2068ba8d8426ec7c 235 Gene3D G3DSA:1.25.10.110 99 170 2.7E-8 T 14-10-2018 JO40_00090 5350725a0594d49c2068ba8d8426ec7c 235 SUPERFAMILY SSF48371 104 230 3.9E-9 T 14-10-2018 IPR016024 Armadillo-type fold JO40_07580 8985d1b767c3be6d071d7f21242612d6 308 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 308 1.2E-17 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_07580 8985d1b767c3be6d071d7f21242612d6 308 Pfam PF04754 Putative transposase, YhgA-like 10 184 3.5E-7 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like JO40_08880 cfebf8f0cc7989572d5a0d86c799b803 166 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 115 160 5.0E-19 T 14-10-2018 JO40_08880 cfebf8f0cc7989572d5a0d86c799b803 166 Pfam PF04191 Phospholipid methyltransferase 52 149 6.5E-11 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 JO40_08880 cfebf8f0cc7989572d5a0d86c799b803 166 Gene3D G3DSA:1.20.120.1630 1 162 9.9E-29 T 14-10-2018 JO40_04185 58ab592c2ad105b8a2af3309b90c6932 278 SUPERFAMILY SSF51726 37 230 2.79E-11 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_04185 58ab592c2ad105b8a2af3309b90c6932 278 Gene3D G3DSA:3.20.20.210 27 265 4.6E-12 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_10160 ac1a85c7d9f1208464da0a75a3e9ff9f 506 Pfam PF02687 FtsX-like permease family 399 500 1.9E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_02475 9a72d333cf3c75e0cca9d05aca9bbb39 386 Pfam PF01458 Uncharacterized protein family (UPF0051) 130 355 7.9E-47 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JO40_02475 9a72d333cf3c75e0cca9d05aca9bbb39 386 SUPERFAMILY SSF101960 74 382 9.15E-63 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JO40_02475 9a72d333cf3c75e0cca9d05aca9bbb39 386 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 94 373 7.6E-84 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 JO40_13320 2ca64bdc54448502a8a2fbbbb918b23a 139 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 8 139 9.3E-36 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JO40_13320 2ca64bdc54448502a8a2fbbbb918b23a 139 PIRSF PIRSF002889 2 139 5.7E-21 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JO40_13320 2ca64bdc54448502a8a2fbbbb918b23a 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 16 36 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO40_13320 2ca64bdc54448502a8a2fbbbb918b23a 139 Pfam PF00460 Flagella basal body rod protein 25 40 1.4E-4 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO40_12020 7e33a993b7c0eafe5fc22f350a694f2d 318 Gene3D G3DSA:3.30.479.30 92 213 2.0E-15 T 14-10-2018 JO40_12020 7e33a993b7c0eafe5fc22f350a694f2d 318 Pfam PF01145 SPFH domain / Band 7 family 34 224 2.7E-27 T 14-10-2018 IPR001107 Band 7 domain JO40_12020 7e33a993b7c0eafe5fc22f350a694f2d 318 SUPERFAMILY SSF117892 61 213 2.62E-17 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO40_12020 7e33a993b7c0eafe5fc22f350a694f2d 318 TIGRFAM TIGR01933 hflK: HflK protein 32 313 3.4E-101 T 14-10-2018 IPR010201 HflK GO:0016021 JO40_12020 7e33a993b7c0eafe5fc22f350a694f2d 318 SMART SM00244 30 211 2.9E-38 T 14-10-2018 IPR001107 Band 7 domain JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 SUPERFAMILY SSF118215 31 439 1.44E-85 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 Pfam PF00375 Sodium:dicarboxylate symporter family 31 439 1.1E-91 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 103 128 2.5E-18 T 14-10-2018 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 394 414 2.5E-18 T 14-10-2018 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.5E-18 T 14-10-2018 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 179 201 2.5E-18 T 14-10-2018 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 2.5E-18 T 14-10-2018 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 367 386 2.5E-18 T 14-10-2018 JO40_04335 44c5621b78c896c9ab6d46a229e03dbc 457 Gene3D G3DSA:1.10.3860.10 21 454 3.2E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO40_01575 d7795d3e7ae6a08ae21a7d50d278cfe1 288 Gene3D G3DSA:3.40.50.620 23 200 4.4E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO40_01575 d7795d3e7ae6a08ae21a7d50d278cfe1 288 Pfam PF06574 FAD synthetase 30 180 1.3E-30 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JO40_01575 d7795d3e7ae6a08ae21a7d50d278cfe1 288 SUPERFAMILY SSF52374 30 189 6.88E-21 T 14-10-2018 JO40_07250 e45c287082f5ec23216bed17a75fedf6 372 SUPERFAMILY SSF47413 2 70 2.22E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_07250 e45c287082f5ec23216bed17a75fedf6 372 Gene3D G3DSA:1.10.260.40 1 92 9.1E-26 T 14-10-2018 JO40_07250 e45c287082f5ec23216bed17a75fedf6 372 Pfam PF13413 Helix-turn-helix domain 8 68 1.5E-22 T 14-10-2018 JO40_06615 1e2b9d3f5373afeea79958cd93b30b60 43 Pfam PF04723 Glycine reductase complex selenoprotein A 4 43 4.3E-17 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 JO40_08320 9d571a7c6d705297daf72593e320b9c7 540 Pfam PF09820 Predicted AAA-ATPase 8 289 4.9E-101 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_08320 9d571a7c6d705297daf72593e320b9c7 540 SUPERFAMILY SSF52540 38 201 2.44E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_08320 9d571a7c6d705297daf72593e320b9c7 540 Pfam PF08011 PD-(D/E)XK nuclease superfamily 439 530 5.4E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_07595 6ecfe1029dd4a14136bd169a833c6007 414 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JO40_07595 6ecfe1029dd4a14136bd169a833c6007 414 Pfam PF01136 Peptidase family U32 78 318 2.5E-88 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 Gene3D G3DSA:3.40.50.300 318 554 9.9E-53 T 14-10-2018 JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 SUPERFAMILY SSF90123 5 461 1.31E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 Gene3D G3DSA:1.20.1560.10 3 300 1.4E-19 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 SMART SM00382 349 541 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 Pfam PF00664 ABC transporter transmembrane region 12 276 6.0E-11 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 SUPERFAMILY SSF52540 324 545 2.27E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_11745 2207db890ba106de8caa5124dcd23f7e 554 Pfam PF00005 ABC transporter 340 474 1.8E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 SUPERFAMILY SSF48403 21 235 1.41E-31 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 SMART SM00248 179 208 5.2E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 SMART SM00248 212 242 1500.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 SMART SM00248 141 170 0.44 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 SMART SM00248 78 107 1.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 SMART SM00248 48 77 1000.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 Gene3D G3DSA:1.25.40.20 20 262 1.3E-32 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO40_02950 c59eae3d0e253a986b1b3a43e90e4c75 354 Pfam PF12796 Ankyrin repeats (3 copies) 148 232 5.2E-9 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO40_04930 a94c17daa6301f551f176dcd83ebac12 348 Pfam PF12146 Serine aminopeptidase, S33 82 189 6.4E-14 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JO40_04930 a94c17daa6301f551f176dcd83ebac12 348 Gene3D G3DSA:3.40.50.1820 55 301 4.0E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_04930 a94c17daa6301f551f176dcd83ebac12 348 SUPERFAMILY SSF53474 34 285 1.09E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_03875 5b34313530f5fe3cb7b1ff2a945c3291 539 SUPERFAMILY SSF52540 35 221 6.37E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03875 5b34313530f5fe3cb7b1ff2a945c3291 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 441 534 3.1E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_03875 5b34313530f5fe3cb7b1ff2a945c3291 539 Pfam PF09820 Predicted AAA-ATPase 10 295 8.7E-104 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_13145 c6e4f6f9f2324fd64db43a2f03ec3486 108 SUPERFAMILY SSF75169 3 103 1.88E-7 T 14-10-2018 IPR027396 DsrEFH-like JO40_13145 c6e4f6f9f2324fd64db43a2f03ec3486 108 Gene3D G3DSA:3.40.1260.10 3 105 2.8E-10 T 14-10-2018 IPR027396 DsrEFH-like JO40_02550 290b6b67cd3887d50752a304a0cab51b 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 319 3.6E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO40_02550 290b6b67cd3887d50752a304a0cab51b 321 SUPERFAMILY SSF161098 115 301 3.79E-27 T 14-10-2018 IPR035906 MetI-like superfamily JO40_02550 290b6b67cd3887d50752a304a0cab51b 321 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 43 78 7.7E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JO40_02550 290b6b67cd3887d50752a304a0cab51b 321 Gene3D G3DSA:1.10.3720.10 107 319 5.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily JO40_00245 3baf65f30a17161fab346453059b53cd 69 SUPERFAMILY SSF64307 3 69 2.49E-14 T 14-10-2018 IPR036868 TusA-like domain superfamily JO40_00245 3baf65f30a17161fab346453059b53cd 69 Gene3D G3DSA:3.30.110.40 3 69 2.4E-19 T 14-10-2018 IPR036868 TusA-like domain superfamily JO40_00245 3baf65f30a17161fab346453059b53cd 69 Pfam PF01206 Sulfurtransferase TusA 5 69 8.3E-16 T 14-10-2018 IPR001455 TusA-like domain JO40_01290 a43f41ff0eb086db8e97347936366de5 96 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 19 89 1.2E-25 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 JO40_13355 cd5e5b1207d98e006b3c6569167492b8 304 Gene3D G3DSA:1.10.443.10 107 291 1.3E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO40_13355 cd5e5b1207d98e006b3c6569167492b8 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 86 5.3E-13 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JO40_13355 cd5e5b1207d98e006b3c6569167492b8 304 Gene3D G3DSA:1.10.150.130 4 104 9.4E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JO40_13355 cd5e5b1207d98e006b3c6569167492b8 304 Pfam PF00589 Phage integrase family 108 283 1.5E-42 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO40_13355 cd5e5b1207d98e006b3c6569167492b8 304 SUPERFAMILY SSF56349 16 286 1.47E-55 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO40_12865 339ece44473656dd12807052c7f0d4f1 231 Pfam PF08713 DNA alkylation repair enzyme 9 177 3.8E-16 T 14-10-2018 IPR014825 DNA alkylation repair enzyme JO40_12865 339ece44473656dd12807052c7f0d4f1 231 SUPERFAMILY SSF48371 10 211 3.67E-34 T 14-10-2018 IPR016024 Armadillo-type fold JO40_12865 339ece44473656dd12807052c7f0d4f1 231 Gene3D G3DSA:1.25.10.90 3 224 1.9E-16 T 14-10-2018 JO40_06695 c6d9dec3c9d71201f4eb16cb23394584 76 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 24 69 1.6E-9 T 14-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 JO40_06695 c6d9dec3c9d71201f4eb16cb23394584 76 PIRSF PIRSF037246 1 76 2.4E-39 T 14-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 JO40_06695 c6d9dec3c9d71201f4eb16cb23394584 76 Gene3D G3DSA:2.30.31.70 1 74 2.5E-31 T 14-10-2018 JO40_03020 7e982b057907421a26f3cd017610b68d 282 Pfam PF02498 BRO family, N-terminal domain 12 108 7.6E-14 T 14-10-2018 IPR003497 BRO N-terminal domain JO40_03020 7e982b057907421a26f3cd017610b68d 282 SMART SM01040 12 112 7.2E-21 T 14-10-2018 IPR003497 BRO N-terminal domain JO40_10890 751c9d3e7fe631f5f445a0671496e180 358 SUPERFAMILY SSF109998 26 210 3.77E-15 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily JO40_10890 751c9d3e7fe631f5f445a0671496e180 358 Gene3D G3DSA:1.10.4030.30 20 240 1.0E-9 T 14-10-2018 JO40_12340 0178c71c9d2864f4e3d48f0522313f6c 198 SUPERFAMILY SSF49464 4 89 6.08E-9 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily JO40_12340 0178c71c9d2864f4e3d48f0522313f6c 198 Gene3D G3DSA:2.60.40.1120 3 85 8.8E-6 T 14-10-2018 JO40_05980 662c1a1b3622b78f65affb953a22823f 576 Gene3D G3DSA:1.10.1370.30 11 576 1.5E-207 T 14-10-2018 JO40_05980 662c1a1b3622b78f65affb953a22823f 576 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 26 572 2.5E-211 T 14-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related JO40_05980 662c1a1b3622b78f65affb953a22823f 576 SUPERFAMILY SSF55486 46 570 2.56E-112 T 14-10-2018 JO40_05980 662c1a1b3622b78f65affb953a22823f 576 Pfam PF01432 Peptidase family M3 178 558 9.2E-31 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JO40_10630 c7423543ab7bf8774eafa21f1063d8f4 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 117 4.7E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JO40_10630 c7423543ab7bf8774eafa21f1063d8f4 125 Gene3D G3DSA:3.10.180.10 1 119 5.5E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO40_10630 c7423543ab7bf8774eafa21f1063d8f4 125 SUPERFAMILY SSF54593 1 119 6.18E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO40_09790 3523eb652e08eeb18247417d256014e9 291 SUPERFAMILY SSF53448 1 258 3.8E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09790 3523eb652e08eeb18247417d256014e9 291 Gene3D G3DSA:3.90.550.10 7 135 1.8E-11 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09790 3523eb652e08eeb18247417d256014e9 291 Pfam PF01501 Glycosyl transferase family 8 18 243 2.2E-9 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 JO40_09975 47187a0d6e1e8e3f6cf5fdb7eaa33d4c 362 SUPERFAMILY SSF51735 6 357 1.39E-89 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_09975 47187a0d6e1e8e3f6cf5fdb7eaa33d4c 362 Gene3D G3DSA:3.40.50.720 6 331 7.0E-126 T 14-10-2018 JO40_09975 47187a0d6e1e8e3f6cf5fdb7eaa33d4c 362 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 346 9.4E-143 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 JO40_09975 47187a0d6e1e8e3f6cf5fdb7eaa33d4c 362 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 331 6.0E-97 T 14-10-2018 IPR016040 NAD(P)-binding domain JO40_09975 47187a0d6e1e8e3f6cf5fdb7eaa33d4c 362 Gene3D G3DSA:3.90.25.10 210 339 7.0E-126 T 14-10-2018 JO40_01300 ee95ba648daa0a3a0122d2a4c8c4fe3a 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 122 208 5.4E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO40_01300 ee95ba648daa0a3a0122d2a4c8c4fe3a 238 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 103 215 3.1E-12 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 JO40_01300 ee95ba648daa0a3a0122d2a4c8c4fe3a 238 Gene3D G3DSA:1.10.150.520 17 112 2.8E-30 T 14-10-2018 JO40_01300 ee95ba648daa0a3a0122d2a4c8c4fe3a 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 87 212 3.3E-16 T 14-10-2018 JO40_01300 ee95ba648daa0a3a0122d2a4c8c4fe3a 238 Gene3D G3DSA:3.40.50.1000 7 235 2.8E-30 T 14-10-2018 IPR023214 HAD superfamily JO40_01300 ee95ba648daa0a3a0122d2a4c8c4fe3a 238 SUPERFAMILY SSF56784 1 236 5.11E-31 T 14-10-2018 IPR036412 HAD-like superfamily JO40_05835 faa87f3d8313ae78cfdb1f3f6f9723f8 356 Pfam PF11070 Protein of unknown function (DUF2871) 216 352 3.8E-37 T 14-10-2018 IPR021299 Protein of unknown function DUF2871 JO40_05070 a9f11b1bf2705608a5d8dd98fceedf97 303 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 226 4.0E-47 T 14-10-2018 JO40_10470 4ca98626ed370a93aa4e28c81ed3f1f8 402 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 295 385 2.6E-9 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain JO40_10470 4ca98626ed370a93aa4e28c81ed3f1f8 402 Gene3D G3DSA:1.10.260.150 33 301 9.5E-19 T 14-10-2018 JO40_10470 4ca98626ed370a93aa4e28c81ed3f1f8 402 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 87 193 9.5E-8 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JO40_10595 33de5854a694f3397e2dc16eb93ca1b5 351 Gene3D G3DSA:3.20.20.80 52 346 8.5E-43 T 14-10-2018 JO40_10595 33de5854a694f3397e2dc16eb93ca1b5 351 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 56 296 2.2E-12 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JO40_10595 33de5854a694f3397e2dc16eb93ca1b5 351 SUPERFAMILY SSF51445 56 333 3.03E-37 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_06470 f178600626a4024df6f5755a287b2b11 336 Gene3D G3DSA:1.25.40.10 229 335 3.3E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 Gene3D G3DSA:1.25.40.10 21 153 2.6E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SUPERFAMILY SSF48452 158 328 1.04E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SUPERFAMILY SSF48452 40 212 1.29E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 Gene3D G3DSA:1.25.40.10 155 228 4.4E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 Pfam PF00515 Tetratricopeptide repeat 75 106 4.9E-9 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 Pfam PF00515 Tetratricopeptide repeat 176 209 1.0E-6 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 Pfam PF13181 Tetratricopeptide repeat 109 140 1.0E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 Pfam PF13181 Tetratricopeptide repeat 40 73 0.061 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SMART SM00028 40 73 0.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SMART SM00028 142 175 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SMART SM00028 74 107 5.3E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SMART SM00028 108 141 0.034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SMART SM00028 243 276 1.7E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SMART SM00028 176 209 2.6E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 SMART SM00028 277 310 0.62 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO40_06470 f178600626a4024df6f5755a287b2b11 336 Pfam PF13414 TPR repeat 252 290 4.5E-10 T 14-10-2018 JO40_07230 3164f25adc3123311113456e042a7581 453 Pfam PF01554 MatE 26 189 9.3E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_07230 3164f25adc3123311113456e042a7581 453 Pfam PF01554 MatE 256 410 5.1E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_07230 3164f25adc3123311113456e042a7581 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 414 1.1E-53 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_07230 3164f25adc3123311113456e042a7581 453 PIRSF PIRSF006603 1 453 1.5E-75 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_10130 dd20fdabe8a8cd1ced5f307afefad050 100 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 87 6.5E-29 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system JO40_10130 dd20fdabe8a8cd1ced5f307afefad050 100 Gene3D G3DSA:3.10.450.530 1 90 2.9E-16 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily JO40_09860 8d263680e1308697bfb6a4a5c407e090 133 SUPERFAMILY SSF51182 9 131 3.11E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO40_09860 8d263680e1308697bfb6a4a5c407e090 133 Gene3D G3DSA:2.60.120.10 5 133 1.5E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_09860 8d263680e1308697bfb6a4a5c407e090 133 Pfam PF05523 WxcM-like, C-terminal 8 132 6.5E-49 T 14-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 JO40_10715 4b15776f37bb6d91f4fb2d99ffacb095 493 PIRSF PIRSF012702 1 493 3.3E-147 T 14-10-2018 IPR009197 Microcystin LR degradation protein MlrC JO40_10715 4b15776f37bb6d91f4fb2d99ffacb095 493 Pfam PF07171 MlrC C-terminus 306 475 5.0E-41 T 14-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal JO40_10715 4b15776f37bb6d91f4fb2d99ffacb095 493 Pfam PF07364 Metallopeptidase family M81 3 284 3.5E-88 T 14-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal JO40_09270 7de3b9b76a9ed94f166219048d15c032 298 SUPERFAMILY SSF52540 4 175 9.71E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09270 7de3b9b76a9ed94f166219048d15c032 298 Gene3D G3DSA:3.40.50.300 2 129 3.2E-5 T 14-10-2018 JO40_02705 7052548cbd1bc6b3b4476392c647205b 305 Gene3D G3DSA:3.90.550.10 1 304 9.9E-104 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_02705 7052548cbd1bc6b3b4476392c647205b 305 SUPERFAMILY SSF53448 3 290 4.98E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_02705 7052548cbd1bc6b3b4476392c647205b 305 Pfam PF00483 Nucleotidyl transferase 7 235 2.5E-6 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JO40_03305 160bcf4c757d854af34c39b0d4b3aeaa 193 Pfam PF02325 YGGT family 11 77 1.0E-15 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 JO40_04280 3e3f54d20585a3ea0dbcce784514e22e 75 Pfam PF01106 NifU-like domain 7 73 2.2E-26 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JO40_04280 3e3f54d20585a3ea0dbcce784514e22e 75 Gene3D G3DSA:3.30.300.130 1 75 2.0E-27 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JO40_04280 3e3f54d20585a3ea0dbcce784514e22e 75 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 75 4.0E-29 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JO40_04280 3e3f54d20585a3ea0dbcce784514e22e 75 SUPERFAMILY SSF117916 4 75 3.27E-23 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JO40_03755 5c1288ae0edd8b9a7e7f7222ba2e0c9a 138 Pfam PF03852 DNA mismatch endonuclease Vsr 1 71 1.5E-29 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 JO40_03755 5c1288ae0edd8b9a7e7f7222ba2e0c9a 138 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 6.2E-44 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 JO40_03755 5c1288ae0edd8b9a7e7f7222ba2e0c9a 138 PIRSF PIRSF018267 1 138 2.5E-55 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 JO40_03755 5c1288ae0edd8b9a7e7f7222ba2e0c9a 138 Gene3D G3DSA:3.40.960.10 20 137 3.5E-46 T 14-10-2018 JO40_03755 5c1288ae0edd8b9a7e7f7222ba2e0c9a 138 SUPERFAMILY SSF52980 1 121 3.81E-49 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO40_03805 0a5b30776297b333b40158f963d0a8db 187 SUPERFAMILY SSF50475 8 177 8.13E-31 T 14-10-2018 JO40_03805 0a5b30776297b333b40158f963d0a8db 187 SMART SM00903 9 149 0.01 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JO40_03805 0a5b30776297b333b40158f963d0a8db 187 Gene3D G3DSA:2.30.110.10 2 187 6.5E-45 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO40_03805 0a5b30776297b333b40158f963d0a8db 187 Pfam PF01613 Flavin reductase like domain 12 145 3.6E-12 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JO40_00830 1779a3b6d6bf386c3ebca8a80a5ad795 349 SUPERFAMILY SSF48452 89 289 1.9E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_00830 1779a3b6d6bf386c3ebca8a80a5ad795 349 ProDom PD416840 MEMBRANE A ANTIGEN TREPONEMAL TMPA PRECURSOR PALMITATE SIGNAL LIPOPROTEIN PROTEIN 66 344 2.0E-111 T 14-10-2018 JO40_07040 d33e79f4e8e32653e2537b2cc9018a0c 155 Gene3D G3DSA:3.40.630.30 3 149 2.3E-15 T 14-10-2018 JO40_07040 d33e79f4e8e32653e2537b2cc9018a0c 155 Pfam PF00583 Acetyltransferase (GNAT) family 39 139 4.8E-12 T 14-10-2018 IPR000182 GNAT domain JO40_07040 d33e79f4e8e32653e2537b2cc9018a0c 155 SUPERFAMILY SSF55729 1 150 1.37E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_05585 20ec4c807bfd43ee059b7c40615465e5 96 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 21 89 1.0E-13 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JO40_04530 0e5a87cbc8a8818b30e3493b97bf901c 163 Pfam PF05258 Protein of unknown function (DUF721) 31 101 4.2E-8 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 JO40_01825 499cfaf4d13d05dc9a4ddb26dab9b6e2 74 SUPERFAMILY SSF89447 9 53 4.97E-10 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO40_01825 499cfaf4d13d05dc9a4ddb26dab9b6e2 74 SMART SM00966 12 58 1.0E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_01825 499cfaf4d13d05dc9a4ddb26dab9b6e2 74 Gene3D G3DSA:2.10.260.10 9 50 4.1E-9 T 14-10-2018 JO40_01825 499cfaf4d13d05dc9a4ddb26dab9b6e2 74 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 11 53 2.8E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO40_01035 15c6de881922bfccf1a72faab078d617 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 54 3.7E-17 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_01035 15c6de881922bfccf1a72faab078d617 86 Pfam PF04221 RelB antitoxin 5 52 7.4E-11 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_01035 15c6de881922bfccf1a72faab078d617 86 Gene3D G3DSA:1.10.1220.10 1 50 1.3E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JO40_13460 c7f69eebfde4094f23a32a1005506533 103 Gene3D G3DSA:3.10.450.530 2 91 9.7E-14 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily JO40_13460 c7f69eebfde4094f23a32a1005506533 103 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 8 88 2.5E-22 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system JO40_10170 a44fb37776d2d5e2498346496fdad273 255 Pfam PF17131 Outer membrane lipoprotein-sorting protein 77 253 2.4E-31 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JO40_10170 a44fb37776d2d5e2498346496fdad273 255 Gene3D G3DSA:2.50.20.10 29 255 5.3E-36 T 14-10-2018 JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 Gene3D G3DSA:3.50.50.60 112 246 1.3E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 Gene3D G3DSA:3.50.50.60 1 289 1.3E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 290 2.3E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 SUPERFAMILY SSF51905 1 309 1.52E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.7E-11 T 14-10-2018 JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.7E-11 T 14-10-2018 JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 7.7E-11 T 14-10-2018 JO40_03350 3c773aa2fac082e359e2f905d72ae7ab 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 7.7E-11 T 14-10-2018 JO40_10365 8c86333ac78227d204d025e6c33e03ac 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 225 2.9E-18 T 14-10-2018 JO40_10365 8c86333ac78227d204d025e6c33e03ac 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 2.7E-41 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_10340 74c87b97f72183867bc3c549283060fe 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 48 6.2E-8 T 14-10-2018 JO40_10340 74c87b97f72183867bc3c549283060fe 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 57 6.2E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO40_10340 74c87b97f72183867bc3c549283060fe 81 SUPERFAMILY SSF143120 3 72 1.57E-11 T 14-10-2018 IPR036165 YefM-like superfamily JO40_08910 921a3308d25bb1f7fd0093d199cee7e2 76 Pfam PF10047 Protein of unknown function (DUF2281) 9 75 3.4E-7 T 14-10-2018 IPR018739 Domain of unknown function DUF2281 JO40_06285 da90fd4eefcbe21bbf6202ff3bf6432c 752 Pfam PF01136 Peptidase family U32 75 291 2.0E-78 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JO40_09620 64bc40171a0d4c3bbe4bf229f73364fa 380 SUPERFAMILY SSF52540 1 294 9.05E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09620 64bc40171a0d4c3bbe4bf229f73364fa 380 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 264 2.9E-17 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JO40_06150 c663f06803a57adc60a115e6f6c229a8 391 Gene3D G3DSA:3.90.1150.10 263 387 1.0E-29 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO40_06150 c663f06803a57adc60a115e6f6c229a8 391 SUPERFAMILY SSF53383 9 385 9.32E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO40_06150 c663f06803a57adc60a115e6f6c229a8 391 Gene3D G3DSA:3.40.640.10 1 261 3.2E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO40_06150 c663f06803a57adc60a115e6f6c229a8 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 18 382 1.6E-108 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO40_06150 c663f06803a57adc60a115e6f6c229a8 391 PIRSF PIRSF000390 5 390 1.2E-100 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO40_07475 61f51e75184552b62df76f1bf4ff0a33 350 Pfam PF00152 tRNA synthetases class II (D, K and N) 5 343 1.7E-37 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO40_07475 61f51e75184552b62df76f1bf4ff0a33 350 Gene3D G3DSA:3.30.930.10 1 345 1.6E-71 T 14-10-2018 JO40_07475 61f51e75184552b62df76f1bf4ff0a33 350 SUPERFAMILY SSF55681 5 342 5.39E-57 T 14-10-2018 JO40_01605 09de9285e5b80e92256dd1b2ba505fd0 235 SUPERFAMILY SSF55120 3 215 3.52E-39 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_01605 09de9285e5b80e92256dd1b2ba505fd0 235 Gene3D G3DSA:3.30.2350.10 5 222 8.6E-42 T 14-10-2018 JO40_01605 09de9285e5b80e92256dd1b2ba505fd0 235 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 42 56 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_01605 09de9285e5b80e92256dd1b2ba505fd0 235 Pfam PF00849 RNA pseudouridylate synthase 33 168 2.0E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO40_07305 e7722bb54b6b74e156e9a951571f67c1 196 SUPERFAMILY SSF64307 1 68 1.31E-11 T 14-10-2018 IPR036868 TusA-like domain superfamily JO40_07305 e7722bb54b6b74e156e9a951571f67c1 196 Gene3D G3DSA:3.30.110.40 1 97 1.1E-20 T 14-10-2018 IPR036868 TusA-like domain superfamily JO40_07305 e7722bb54b6b74e156e9a951571f67c1 196 SUPERFAMILY SSF75169 98 189 6.87E-11 T 14-10-2018 IPR027396 DsrEFH-like JO40_07305 e7722bb54b6b74e156e9a951571f67c1 196 Pfam PF01206 Sulfurtransferase TusA 2 68 3.6E-14 T 14-10-2018 IPR001455 TusA-like domain JO40_07305 e7722bb54b6b74e156e9a951571f67c1 196 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 194 3.4E-65 T 14-10-2018 IPR019870 Selenium metabolism protein YedF JO40_11105 74d237f105e867ae04f653338a2ad43b 200 Gene3D G3DSA:3.40.50.2020 1 192 5.8E-24 T 14-10-2018 JO40_11105 74d237f105e867ae04f653338a2ad43b 200 SUPERFAMILY SSF53271 3 180 1.85E-19 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_11105 74d237f105e867ae04f653338a2ad43b 200 Pfam PF00156 Phosphoribosyl transferase domain 18 132 3.3E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO40_10850 d976ceff4f80988962c7823a693ef120 458 PIRSF PIRSF006060 1 454 3.9E-55 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JO40_10850 d976ceff4f80988962c7823a693ef120 458 Gene3D G3DSA:1.20.1740.10 4 452 3.4E-59 T 14-10-2018 JO40_10850 d976ceff4f80988962c7823a693ef120 458 Pfam PF13520 Amino acid permease 10 421 1.3E-42 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JO40_08190 221b9af9a88852cf9d871924415220c1 230 Gene3D G3DSA:3.10.310.50 113 226 6.2E-34 T 14-10-2018 JO40_05855 14f9a87b84b93087eda082cbcaf7f1a6 169 Pfam PF03963 Flagellar hook capping protein - N-terminal region 49 106 5.3E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein JO40_07725 be33e265e3eca6b5ec826fb5774a941c 305 Pfam PF10646 Sporulation and spore germination 172 286 8.9E-21 T 14-10-2018 IPR019606 GerMN domain JO40_07725 be33e265e3eca6b5ec826fb5774a941c 305 SMART SM00909 199 290 3.7E-26 T 14-10-2018 IPR019606 GerMN domain JO40_08875 a1ad80c3abd588da7ead3fd537f58df3 250 Gene3D G3DSA:2.160.20.120 33 250 6.5E-55 T 14-10-2018 JO40_08875 a1ad80c3abd588da7ead3fd537f58df3 250 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 52 235 3.7E-43 T 14-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain JO40_01195 ce74cc11887207b9c5a61ffcba4cf538 297 Gene3D G3DSA:1.10.3290.10 58 277 1.3E-50 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_01195 ce74cc11887207b9c5a61ffcba4cf538 297 SUPERFAMILY SSF140931 121 284 1.01E-29 T 14-10-2018 IPR036597 Fido-like domain superfamily JO40_01195 ce74cc11887207b9c5a61ffcba4cf538 297 Pfam PF02661 Fic/DOC family 144 238 5.9E-16 T 14-10-2018 IPR003812 Fido domain JO40_07105 adcf78eb40ffe35c9024a91d357155d5 284 Gene3D G3DSA:3.40.50.1820 28 277 6.2E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_07105 adcf78eb40ffe35c9024a91d357155d5 284 SUPERFAMILY SSF53474 8 278 1.29E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_07105 adcf78eb40ffe35c9024a91d357155d5 284 Pfam PF12146 Serine aminopeptidase, S33 58 202 7.3E-19 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JO40_06570 d9de8b07c7fb82b8ce5f5e7db80ff96a 301 SMART SM00382 33 236 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_06570 d9de8b07c7fb82b8ce5f5e7db80ff96a 301 Pfam PF00005 ABC transporter 25 168 2.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06570 d9de8b07c7fb82b8ce5f5e7db80ff96a 301 SUPERFAMILY SSF52540 4 235 4.89E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_06570 d9de8b07c7fb82b8ce5f5e7db80ff96a 301 Gene3D G3DSA:3.40.50.300 3 268 2.7E-47 T 14-10-2018 JO40_04880 57a92a751bf9c91fe47ff76dca7d392f 224 Pfam PF09711 CRISPR-associated protein (Cas_Csn2) 40 220 2.5E-51 T 14-10-2018 IPR010146 CRISPR-associated protein, Csn2-type JO40_04880 57a92a751bf9c91fe47ff76dca7d392f 224 TIGRFAM TIGR01866 cas_Csn2: CRISPR type II-A/NMEMI-associated protein Csn2 2 223 3.1E-65 T 14-10-2018 IPR010146 CRISPR-associated protein, Csn2-type JO40_04880 57a92a751bf9c91fe47ff76dca7d392f 224 Gene3D G3DSA:3.40.50.11940 102 224 1.5E-8 T 14-10-2018 IPR038600 CRISPR-associated protein Csn2 superfamily JO40_11170 10ef92b1d5827130625e2cc87fd95bc7 328 Pfam PF07456 Heptaprenyl diphosphate synthase component I 1 132 5.1E-31 T 14-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I JO40_05430 bd32186c4cb99c0e68b5d4994dbc5fd2 299 Gene3D G3DSA:3.40.630.30 168 288 2.1E-13 T 14-10-2018 JO40_05430 bd32186c4cb99c0e68b5d4994dbc5fd2 299 Pfam PF00583 Acetyltransferase (GNAT) family 204 288 3.7E-8 T 14-10-2018 IPR000182 GNAT domain JO40_05430 bd32186c4cb99c0e68b5d4994dbc5fd2 299 SUPERFAMILY SSF55729 167 297 2.48E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_11045 971536b07e70b932a056614bf2e9e3f2 267 PIRSF PIRSF004789 1 264 8.9E-91 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like JO40_11045 971536b07e70b932a056614bf2e9e3f2 267 SUPERFAMILY SSF56300 1 257 9.61E-51 T 14-10-2018 JO40_11045 971536b07e70b932a056614bf2e9e3f2 267 Pfam PF13277 YmdB-like protein 4 256 1.9E-78 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like JO40_11045 971536b07e70b932a056614bf2e9e3f2 267 Gene3D G3DSA:3.60.21.10 1 263 2.0E-83 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO40_04635 40869de93d97a34294a6126e209e4ee9 137 Pfam PF13310 Virulence protein RhuM family 65 105 1.1E-10 T 14-10-2018 IPR011204 Virulence protein RhuM-like JO40_00305 d9971f6781748ce153a1cef6d3d5a810 211 Gene3D G3DSA:3.40.50.360 1 198 4.0E-9 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_00305 d9971f6781748ce153a1cef6d3d5a810 211 Pfam PF02525 Flavodoxin-like fold 1 73 2.5E-5 T 14-10-2018 IPR003680 Flavodoxin-like fold JO40_00305 d9971f6781748ce153a1cef6d3d5a810 211 SUPERFAMILY SSF52218 1 133 1.21E-13 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_09140 5c3fd7d5d5b2618fbc169a2c5ad04a83 195 Gene3D G3DSA:3.60.15.10 1 194 5.7E-22 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_09140 5c3fd7d5d5b2618fbc169a2c5ad04a83 195 SUPERFAMILY SSF56281 1 191 2.5E-22 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO40_07035 b8b3d0fe67c99c405c6f82f1efb0cb5d 187 SUPERFAMILY SSF50475 11 177 1.36E-31 T 14-10-2018 JO40_07035 b8b3d0fe67c99c405c6f82f1efb0cb5d 187 Gene3D G3DSA:2.30.110.10 3 187 1.3E-44 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO40_07035 b8b3d0fe67c99c405c6f82f1efb0cb5d 187 Pfam PF01613 Flavin reductase like domain 12 145 1.7E-13 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JO40_09675 ebb27318cdfb70b2432b53a12a85a12a 239 Pfam PF04620 Flagellar filament outer layer protein Flaa 29 222 3.2E-52 T 14-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 JO40_01235 c7294453b85d61c46ab3242ad7298752 92 Gene3D G3DSA:1.10.1220.10 4 87 3.8E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JO40_01235 c7294453b85d61c46ab3242ad7298752 92 SUPERFAMILY SSF47598 2 45 2.26E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO40_03030 3c5d4be3fbb09c74396a6a45facd8d5f 244 SUPERFAMILY SSF48371 3 180 2.61E-5 T 14-10-2018 IPR016024 Armadillo-type fold JO40_03045 b66921e15fcba4fc40d83d9f9216292c 497 Gene3D G3DSA:3.80.10.10 144 374 1.9E-7 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_03045 b66921e15fcba4fc40d83d9f9216292c 497 SUPERFAMILY SSF52058 180 351 1.39E-6 T 14-10-2018 JO40_11030 e4ddc3841c0595eb13adc26b3a8722a4 435 SUPERFAMILY SSF111283 8 435 5.1E-72 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JO40_11030 e4ddc3841c0595eb13adc26b3a8722a4 435 Pfam PF01523 Putative modulator of DNA gyrase 25 314 1.6E-31 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JO40_11030 e4ddc3841c0595eb13adc26b3a8722a4 435 Gene3D G3DSA:3.30.2290.10 5 206 1.0E-15 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal JO40_04835 43a5901e715549716e0d9c7cd54700d8 332 SUPERFAMILY SSF52540 4 307 8.19E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_04835 43a5901e715549716e0d9c7cd54700d8 332 Gene3D G3DSA:1.10.8.300 207 329 1.5E-36 T 14-10-2018 JO40_04835 43a5901e715549716e0d9c7cd54700d8 332 PIRSF PIRSF002849 3 332 4.4E-129 T 14-10-2018 JO40_04835 43a5901e715549716e0d9c7cd54700d8 332 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 170 4.3E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JO40_04835 43a5901e715549716e0d9c7cd54700d8 332 Gene3D G3DSA:3.40.50.300 21 187 5.7E-46 T 14-10-2018 JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 Gene3D G3DSA:3.40.50.300 1 243 7.4E-57 T 14-10-2018 JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 Pfam PF00005 ABC transporter 19 169 1.6E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 SMART SM00382 297 473 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 SMART SM00382 27 217 2.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 SUPERFAMILY SSF52540 2 229 7.14E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 Gene3D G3DSA:3.40.50.300 257 473 1.9E-48 T 14-10-2018 JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 SUPERFAMILY SSF52540 267 471 1.38E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_05545 2b029fcc9319ec37a977fc0378945a2b 473 Pfam PF00005 ABC transporter 288 427 9.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_06580 af14281eeb0cfb41bc9217e165949ddc 259 Pfam PF06182 ABC-2 family transporter protein 54 249 2.5E-8 T 14-10-2018 IPR010390 Protein of unknown function DUF990 JO40_01100 f9ea6d94acc356addc181296a7d17563 300 SMART SM00934 17 282 4.9E-5 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_01100 f9ea6d94acc356addc181296a7d17563 300 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 80 242 8.4E-14 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO40_01100 f9ea6d94acc356addc181296a7d17563 300 SUPERFAMILY SSF51366 3 280 7.33E-43 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JO40_01100 f9ea6d94acc356addc181296a7d17563 300 Gene3D G3DSA:3.20.20.70 1 292 7.3E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO40_01100 f9ea6d94acc356addc181296a7d17563 300 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 254 5.3E-43 T 14-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JO40_05595 f293d9d55417667d06d63ceb32599c1c 84 SUPERFAMILY SSF47598 3 50 5.34E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO40_12125 b8e02416d1745ec4eb2e4d8ec33ba742 149 Pfam PF04977 Septum formation initiator 16 92 1.9E-12 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC JO40_00430 e50453673457e3aab224b01b038c3e58 294 Pfam PF00892 EamA-like transporter family 149 284 4.8E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_00430 e50453673457e3aab224b01b038c3e58 294 Pfam PF00892 EamA-like transporter family 6 139 1.4E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO40_00430 e50453673457e3aab224b01b038c3e58 294 SUPERFAMILY SSF103481 40 142 2.09E-14 T 14-10-2018 JO40_00430 e50453673457e3aab224b01b038c3e58 294 SUPERFAMILY SSF103481 186 289 2.35E-12 T 14-10-2018 JO40_07155 b147c074c29bbdb6c1b2acfe3789f1c9 266 SUPERFAMILY SSF53474 55 212 2.76E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_07155 b147c074c29bbdb6c1b2acfe3789f1c9 266 Gene3D G3DSA:3.40.50.1820 42 266 3.7E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_07155 b147c074c29bbdb6c1b2acfe3789f1c9 266 Pfam PF00326 Prolyl oligopeptidase family 111 167 1.2E-6 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JO40_05675 8cc8d94ff2215335bd5b25fd8f22070b 254 Pfam PF02517 CAAX protease self-immunity 115 212 3.0E-10 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO40_08475 9d97fa4818ffba008fb299d92a76d867 284 Gene3D G3DSA:3.40.630.30 3 121 4.6E-14 T 14-10-2018 JO40_08475 9d97fa4818ffba008fb299d92a76d867 284 Pfam PF00583 Acetyltransferase (GNAT) family 24 110 4.5E-9 T 14-10-2018 IPR000182 GNAT domain JO40_08475 9d97fa4818ffba008fb299d92a76d867 284 SUPERFAMILY SSF55729 15 122 4.97E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_00235 b583770d276046b993e1d2200fc24cac 207 SMART SM00900 46 147 6.8E-4 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO40_00235 b583770d276046b993e1d2200fc24cac 207 Pfam PF04205 FMN-binding domain 46 144 5.5E-6 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO40_03475 8057557f5b4dc523fcd2bb1b10398ce8 360 Pfam PF00953 Glycosyl transferase family 4 85 242 5.2E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 JO40_03400 378f6ad3d198c5527daffa6ed7912824 289 SMART SM00382 34 213 4.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_03400 378f6ad3d198c5527daffa6ed7912824 289 Gene3D G3DSA:3.40.50.300 4 254 5.6E-47 T 14-10-2018 JO40_03400 378f6ad3d198c5527daffa6ed7912824 289 SUPERFAMILY SSF52540 4 229 7.54E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_03400 378f6ad3d198c5527daffa6ed7912824 289 Pfam PF00005 ABC transporter 25 164 9.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_08850 c71251eeed0adce8ed6f844dfa59dd8b 449 Gene3D G3DSA:3.30.1330.60 325 448 2.2E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_08850 c71251eeed0adce8ed6f844dfa59dd8b 449 Pfam PF00691 OmpA family 351 440 1.0E-13 T 14-10-2018 IPR006665 OmpA-like domain JO40_08850 c71251eeed0adce8ed6f844dfa59dd8b 449 SUPERFAMILY SSF103088 332 446 3.79E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_11710 81870ad531c28c87cb78ec12278888d4 378 Pfam PF02687 FtsX-like permease family 282 361 2.6E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_11710 81870ad531c28c87cb78ec12278888d4 378 Pfam PF12704 MacB-like periplasmic core domain 23 194 1.2E-6 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO40_01315 d6373236c5f47ed0d2cf337b72d4e7a2 184 Gene3D G3DSA:3.40.630.30 4 178 2.9E-43 T 14-10-2018 JO40_01315 d6373236c5f47ed0d2cf337b72d4e7a2 184 SUPERFAMILY SSF55729 3 170 4.43E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_01315 d6373236c5f47ed0d2cf337b72d4e7a2 184 Pfam PF13302 Acetyltransferase (GNAT) domain 12 146 8.2E-25 T 14-10-2018 IPR000182 GNAT domain JO40_01335 2637c660cfc8e2ebd913a3be2b7ecfc2 130 Pfam PF12650 Domain of unknown function (DUF3784) 6 103 1.0E-20 T 14-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 JO40_03800 a9449e538545a70e8b096d69e4378a3e 122 Pfam PF04343 Protein of unknown function, DUF488 6 115 2.8E-25 T 14-10-2018 IPR007438 Protein of unknown function DUF488 JO40_11695 74d8f5f04d2be20f93ddde456b39c961 403 Pfam PF02687 FtsX-like permease family 301 398 6.8E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_04760 5bf69a7ffce9dafa7998550ba5b2485f 174 SUPERFAMILY SSF55724 22 167 1.88E-5 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich JO40_09440 6fce75dc3904df2e9f7972ce4a3c9b96 120 Gene3D G3DSA:3.10.450.50 3 116 7.3E-25 T 14-10-2018 JO40_09440 6fce75dc3904df2e9f7972ce4a3c9b96 120 SUPERFAMILY SSF54427 3 115 1.27E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily JO40_10255 b4056a6350927252821d1d00d61e4194 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 63 3.7E-8 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO40_10255 b4056a6350927252821d1d00d61e4194 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 50 2.2E-8 T 14-10-2018 JO40_10255 b4056a6350927252821d1d00d61e4194 81 SUPERFAMILY SSF143120 4 72 1.57E-12 T 14-10-2018 IPR036165 YefM-like superfamily JO40_12270 5e121413309b6910e365b3e4af5326da 169 PIRSF PIRSF037497 3 169 2.0E-50 T 14-10-2018 IPR017225 Cell shape-determining protein MreD, predicted JO40_12270 5e121413309b6910e365b3e4af5326da 169 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 154 4.9E-23 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JO40_12270 5e121413309b6910e365b3e4af5326da 169 Pfam PF04093 rod shape-determining protein MreD 6 156 5.8E-21 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JO40_05995 1ce8c9514126fa16bc6ced0f215ca9d0 233 Pfam PF07947 YhhN family 38 226 2.9E-33 T 14-10-2018 IPR012506 YhhN-like GO:0016021 JO40_12350 fef68e0e6e0028679dcbeb125ae0102f 338 Pfam PF13310 Virulence protein RhuM family 64 310 3.8E-101 T 14-10-2018 IPR011204 Virulence protein RhuM-like JO40_12350 fef68e0e6e0028679dcbeb125ae0102f 338 PIRSF PIRSF015268 1 337 6.6E-125 T 14-10-2018 IPR011204 Virulence protein RhuM-like JO40_09190 9df597842d17ee864cebf647498d71f8 913 SUPERFAMILY SSF82171 277 472 2.9E-5 T 14-10-2018 JO40_01955 cdf9d8774bc910d3e4392b2d553b185c 338 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 9 327 23.553 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 JO40_01955 cdf9d8774bc910d3e4392b2d553b185c 338 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 14 325 3.8E-86 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 JO40_01955 cdf9d8774bc910d3e4392b2d553b185c 338 Pfam PF03116 NQR2, RnfD, RnfE family 11 320 1.4E-106 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 JO40_03525 9472b5210a93563434de565f20888095 157 SUPERFAMILY SSF140566 18 123 1.83E-5 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 JO40_12820 4e5343a6d9142aa210839d82c3672c62 445 Pfam PF02687 FtsX-like permease family 313 437 6.7E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_12820 4e5343a6d9142aa210839d82c3672c62 445 Pfam PF12704 MacB-like periplasmic core domain 30 250 7.7E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO40_03580 0c043d07491b9d2a5b6b132a5839de79 541 Pfam PF00128 Alpha amylase, catalytic domain 26 369 3.8E-99 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO40_03580 0c043d07491b9d2a5b6b132a5839de79 541 Gene3D G3DSA:3.90.400.10 103 175 3.0E-174 T 14-10-2018 JO40_03580 0c043d07491b9d2a5b6b132a5839de79 541 Gene3D G3DSA:2.60.40.1180 473 541 9.5E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JO40_03580 0c043d07491b9d2a5b6b132a5839de79 541 Gene3D G3DSA:3.20.20.80 3 463 3.0E-174 T 14-10-2018 JO40_03580 0c043d07491b9d2a5b6b132a5839de79 541 SUPERFAMILY SSF51445 2 469 1.25E-137 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO40_03580 0c043d07491b9d2a5b6b132a5839de79 541 SMART SM00642 11 407 1.8E-121 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO40_03580 0c043d07491b9d2a5b6b132a5839de79 541 SUPERFAMILY SSF51011 472 540 3.84E-8 T 14-10-2018 JO40_09765 21c8881bae2d0036a1f8292831477254 257 SUPERFAMILY SSF53335 50 218 5.63E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_09765 21c8881bae2d0036a1f8292831477254 257 Gene3D G3DSA:3.40.50.150 13 219 1.5E-25 T 14-10-2018 JO40_09765 21c8881bae2d0036a1f8292831477254 257 Pfam PF13649 Methyltransferase domain 65 157 1.1E-15 T 14-10-2018 JO40_09460 c386aacc9f28d2749509071fdb9fc03b 192 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 8 186 2.4E-28 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_09460 c386aacc9f28d2749509071fdb9fc03b 192 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 6 185 2.6E-26 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_03490 3baf726ce16a4618ebeccdee812e697c 235 Pfam PF10895 Domain of unknown function (DUF2715) 84 234 2.2E-7 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO40_04250 6b5918efd645663ce10632314e5a2ff9 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 1.4E-51 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_04250 6b5918efd645663ce10632314e5a2ff9 451 PIRSF PIRSF006603 1 448 7.0E-73 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_04250 6b5918efd645663ce10632314e5a2ff9 451 Pfam PF01554 MatE 23 183 1.2E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_04250 6b5918efd645663ce10632314e5a2ff9 451 Pfam PF01554 MatE 245 401 1.2E-12 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_02440 cc753d1aa833341c9c878b2f530f60c4 433 Pfam PF03390 2-hydroxycarboxylate transporter family 10 426 1.1E-159 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 JO40_02440 cc753d1aa833341c9c878b2f530f60c4 433 PIRSF PIRSF005348 1 432 3.4E-169 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 JO40_05610 8219c58e4a0301357cc6fdb54799f3a6 197 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 48 187 1.7E-20 T 14-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase JO40_09920 70eca439c2a369254060eb7d8190e7ea 904 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 33 220 2.9E-26 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO40_09920 70eca439c2a369254060eb7d8190e7ea 904 Pfam PF02096 60Kd inner membrane protein 33 220 1.6E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO40_09545 374cb82e2add239ebe1972c3a97bdf05 183 Pfam PF10962 Protein of unknown function (DUF2764) 117 180 1.1E-4 T 14-10-2018 IPR024492 Protein of unknown function DUF2764 JO40_04510 ea61d577a1da65b7153b75546d1e7621 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 82 2.2E-20 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_04510 ea61d577a1da65b7153b75546d1e7621 86 Pfam PF04221 RelB antitoxin 1 54 2.5E-9 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO40_03765 412c7bd90ec042ed1b942e92bd8eca9f 329 Pfam PF09565 NgoFVII restriction endonuclease 26 306 2.5E-54 T 14-10-2018 IPR019065 Restriction endonuclease, type II, NgoFVII JO40_03765 412c7bd90ec042ed1b942e92bd8eca9f 329 Gene3D G3DSA:3.30.870.10 1 178 1.8E-37 T 14-10-2018 JO40_03560 61da7fa1b96e84c511a30ea83304ec23 139 Pfam PF04519 Polymer-forming cytoskeletal 12 108 1.6E-23 T 14-10-2018 IPR007607 Bactofilin A/B JO40_10405 7410afb40c408d42bed59c31e76da7d7 125 Pfam PF04519 Polymer-forming cytoskeletal 19 115 3.3E-21 T 14-10-2018 IPR007607 Bactofilin A/B JO40_09875 3bb03142ff8b983385bf5ce860a3e8d0 201 Pfam PF13489 Methyltransferase domain 35 148 3.9E-9 T 14-10-2018 JO40_09875 3bb03142ff8b983385bf5ce860a3e8d0 201 Gene3D G3DSA:3.40.50.150 3 201 1.7E-34 T 14-10-2018 JO40_09875 3bb03142ff8b983385bf5ce860a3e8d0 201 SUPERFAMILY SSF53335 11 200 3.95E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO40_09840 24ae443b81f1ccfcecee86b27c27fbd1 450 Gene3D G3DSA:3.40.50.300 167 370 3.2E-7 T 14-10-2018 JO40_09840 24ae443b81f1ccfcecee86b27c27fbd1 450 SUPERFAMILY SSF52540 166 356 1.19E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00575 54164b5db97e9df1cf2c647a8e7be718 272 SUPERFAMILY SSF49464 177 242 2.39E-6 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily JO40_00575 54164b5db97e9df1cf2c647a8e7be718 272 Pfam PF10670 Domain of unknown function (DUF4198) 19 246 1.5E-36 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 JO40_11795 7c8f71c249d863b026bee0d5f13b297e 124 SUPERFAMILY SSF55298 7 121 3.06E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO40_11795 7c8f71c249d863b026bee0d5f13b297e 124 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 7 119 2.2E-24 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JO40_11795 7c8f71c249d863b026bee0d5f13b297e 124 Gene3D G3DSA:3.30.1330.40 5 123 9.4E-35 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO40_11795 7c8f71c249d863b026bee0d5f13b297e 124 Pfam PF07736 Chorismate mutase type I 8 119 7.8E-32 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JO40_11795 7c8f71c249d863b026bee0d5f13b297e 124 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 17 119 3.0E-42 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JO40_06125 982a31524c17c60283af63df46929197 495 SUPERFAMILY SSF51735 7 137 2.72E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_06125 982a31524c17c60283af63df46929197 495 Gene3D G3DSA:3.40.50.720 6 132 3.2E-26 T 14-10-2018 JO40_06125 982a31524c17c60283af63df46929197 495 SUPERFAMILY SSF51735 148 419 1.43E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO40_06125 982a31524c17c60283af63df46929197 495 Pfam PF02719 Polysaccharide biosynthesis protein 151 442 3.2E-113 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JO40_06125 982a31524c17c60283af63df46929197 495 Gene3D G3DSA:3.40.50.720 146 494 7.4E-107 T 14-10-2018 JO40_08175 3b37f71dc9587a7649dd02cf573397cc 296 Pfam PF04754 Putative transposase, YhgA-like 67 171 8.2E-5 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like JO40_02630 61c8efe08a8a4a75cafa7eddf450423b 258 Pfam PF00005 ABC transporter 20 167 3.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO40_02630 61c8efe08a8a4a75cafa7eddf450423b 258 Gene3D G3DSA:3.40.50.300 1 249 2.5E-67 T 14-10-2018 JO40_02630 61c8efe08a8a4a75cafa7eddf450423b 258 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO40_02630 61c8efe08a8a4a75cafa7eddf450423b 258 SMART SM00382 28 217 8.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO40_02630 61c8efe08a8a4a75cafa7eddf450423b 258 SUPERFAMILY SSF52540 3 235 1.01E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_00150 867d16dd000f1fcf544ab52f481238a8 156 Pfam PF03748 Flagellar basal body-associated protein FliL 83 154 3.3E-9 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 JO40_09780 be8dab74f5b0ff9b0a9d9279d95de7a0 368 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 365 2.4E-152 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 JO40_09780 be8dab74f5b0ff9b0a9d9279d95de7a0 368 Gene3D G3DSA:3.40.50.2000 3 361 6.2E-145 T 14-10-2018 JO40_09780 be8dab74f5b0ff9b0a9d9279d95de7a0 368 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 363 6.2E-120 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JO40_09780 be8dab74f5b0ff9b0a9d9279d95de7a0 368 SUPERFAMILY SSF53756 1 365 6.28E-133 T 14-10-2018 JO40_09780 be8dab74f5b0ff9b0a9d9279d95de7a0 368 Gene3D G3DSA:3.40.50.2000 188 350 6.2E-145 T 14-10-2018 JO40_04355 4d548b3843be07416c4906c098642213 384 SUPERFAMILY SSF53659 29 291 5.28E-22 T 14-10-2018 JO40_04355 4d548b3843be07416c4906c098642213 384 PIRSF PIRSF036593 1 384 2.1E-151 T 14-10-2018 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit JO40_04355 4d548b3843be07416c4906c098642213 384 Pfam PF02504 Fatty acid synthesis protein 29 363 4.2E-43 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 JO40_04355 4d548b3843be07416c4906c098642213 384 Gene3D G3DSA:3.40.718.10 110 234 5.9E-10 T 14-10-2018 JO40_03205 378019940bd45ad350b7e8ab7a213a65 200 SUPERFAMILY SSF53474 4 197 1.77E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_03205 378019940bd45ad350b7e8ab7a213a65 200 Gene3D G3DSA:3.40.50.1820 2 199 3.9E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_04990 b9bd1792f5e8abe9743762a58881014a 220 Pfam PF13490 Putative zinc-finger 10 36 1.3E-6 T 14-10-2018 IPR027383 Putative zinc-finger JO40_04990 b9bd1792f5e8abe9743762a58881014a 220 Gene3D G3DSA:1.10.10.1320 1 96 5.4E-6 T 14-10-2018 JO40_10040 3b2f34d37102ed9e887d8b8133aa8c4f 278 Pfam PF02517 CAAX protease self-immunity 135 224 5.2E-20 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO40_11735 3c52e7b232424bb97f7530bb1ae5d064 422 Pfam PF03239 Iron permease FTR1 family 60 319 9.0E-44 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 JO40_10310 3780d654479b50481f54b6e2d81f5b12 118 Pfam PF01934 Protein of unknown function DUF86 16 106 1.2E-26 T 14-10-2018 IPR008201 Protein of unknown function DUF86 JO40_04290 473db5eed42fe0cd5fad908784a52b35 125 Gene3D G3DSA:3.40.50.1010 1 123 1.5E-12 T 14-10-2018 JO40_04290 473db5eed42fe0cd5fad908784a52b35 125 SUPERFAMILY SSF88723 1 125 3.36E-20 T 14-10-2018 IPR029060 PIN-like domain superfamily JO40_04290 473db5eed42fe0cd5fad908784a52b35 125 Pfam PF01850 PIN domain 2 120 7.0E-15 T 14-10-2018 IPR002716 PIN domain JO40_03600 7e9b69505f59a31a169839fc959f2414 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 328 1.6E-18 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO40_04200 b5d0320660ccd02be3e919f60f156596 214 Pfam PF02310 B12 binding domain 93 205 1.6E-23 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 JO40_04200 b5d0320660ccd02be3e919f60f156596 214 Gene3D G3DSA:3.40.50.280 84 214 3.8E-48 T 14-10-2018 JO40_04200 b5d0320660ccd02be3e919f60f156596 214 SUPERFAMILY SSF52242 72 213 2.35E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 JO40_04200 b5d0320660ccd02be3e919f60f156596 214 Pfam PF02607 B12 binding domain 7 79 5.6E-15 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO40_04200 b5d0320660ccd02be3e919f60f156596 214 Gene3D G3DSA:1.10.1240.10 3 83 6.3E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO40_04200 b5d0320660ccd02be3e919f60f156596 214 SMART SM01018 4 87 2.9E-19 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO40_04200 b5d0320660ccd02be3e919f60f156596 214 SUPERFAMILY SSF47644 2 86 3.27E-21 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO40_00030 57b8cb70b22c878d043439a543f1a563 100 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 8.6E-27 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JO40_08455 c5d7e173bb253d2015a2ebd9fed43e4b 235 Pfam PF16258 Domain of unknown function (DUF4912) 81 190 8.3E-23 T 14-10-2018 IPR032585 Protein of unknown function DUF4912 JO40_06635 38401686cbc41a01f70a711eae543723 386 SUPERFAMILY SSF53807 86 385 5.89E-48 T 14-10-2018 JO40_06635 38401686cbc41a01f70a711eae543723 386 Pfam PF01497 Periplasmic binding protein 102 342 1.6E-20 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JO40_06635 38401686cbc41a01f70a711eae543723 386 Gene3D G3DSA:3.40.50.1980 80 375 5.4E-23 T 14-10-2018 JO40_09445 37e63fc57085cccede2bff191772bcf6 332 Pfam PF10543 ORF6N domain 19 108 2.1E-34 T 14-10-2018 IPR018873 KilA-N, DNA-binding domain JO40_08860 adfdd9149e25c6c7d7ac7bc1a971ff7a 156 Gene3D G3DSA:1.25.40.10 41 154 1.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_08860 adfdd9149e25c6c7d7ac7bc1a971ff7a 156 SUPERFAMILY SSF48452 45 111 5.06E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_12030 65a99221fe2e80a5e6dd559bba5c296e 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 148 1.4E-54 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JO40_12030 65a99221fe2e80a5e6dd559bba5c296e 151 Pfam PF03477 ATP cone domain 50 137 1.2E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JO40_12030 65a99221fe2e80a5e6dd559bba5c296e 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 75.39 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JO40_10125 3863a70ec7aa1a0932fa951deeaa03c3 95 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 26 56 5.5E-8 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JO40_01250 d88833708a0e23004e41e6e5dfa14e2e 422 Gene3D G3DSA:3.30.1330.60 282 422 9.6E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_01250 d88833708a0e23004e41e6e5dfa14e2e 422 SUPERFAMILY SSF103088 312 419 2.35E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO40_01250 d88833708a0e23004e41e6e5dfa14e2e 422 Pfam PF00691 OmpA family 318 413 4.6E-21 T 14-10-2018 IPR006665 OmpA-like domain JO40_01500 df07a654f62f13eb56a918c069281895 209 Pfam PF10895 Domain of unknown function (DUF2715) 60 183 7.0E-6 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO40_01500 df07a654f62f13eb56a918c069281895 209 SUPERFAMILY SSF56925 29 163 4.71E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JO40_09100 582f961edaffd11528296e382b59aabb 313 Pfam PF02562 PhoH-like protein 108 311 1.7E-85 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 JO40_09100 582f961edaffd11528296e382b59aabb 313 Gene3D G3DSA:3.40.50.300 105 311 2.7E-72 T 14-10-2018 JO40_09100 582f961edaffd11528296e382b59aabb 313 SUPERFAMILY SSF52540 59 285 1.47E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO40_09760 2e757612f97c86ab7c3045cfbd978671 343 Pfam PF01757 Acyltransferase family 24 322 1.8E-16 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JO40_04700 6d1fc1cea52aeb2b0be426fd266e2146 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 441 534 2.2E-24 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_04700 6d1fc1cea52aeb2b0be426fd266e2146 539 Pfam PF09820 Predicted AAA-ATPase 10 295 6.8E-104 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_12850 8dc14c064ad68436c0fedc6db1bd089e 106 SUPERFAMILY SSF52172 15 105 1.11E-5 T 14-10-2018 IPR011006 CheY-like superfamily JO40_06895 d35d7736389b4c049e184ad44bd27f64 131 Pfam PF11680 Protein of unknown function (DUF3276) 6 103 5.2E-14 T 14-10-2018 IPR021694 Protein of unknown function DUF3276 JO40_06895 d35d7736389b4c049e184ad44bd27f64 131 SMART SM00712 6 73 1.8E-27 T 14-10-2018 IPR006628 Purine-rich element binding protein family JO40_06895 d35d7736389b4c049e184ad44bd27f64 131 Gene3D G3DSA:3.10.450.700 1 78 4.4E-23 T 14-10-2018 JO40_09895 0a5ef06b2cda3335ba8528ae84583888 254 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 7 181 8.7E-38 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 JO40_08025 0239171175c35b504e390b123faefaec 59 Pfam PF05154 TM2 domain 1 43 8.1E-13 T 14-10-2018 IPR007829 TM2 domain JO40_13195 f63b884bff4d8424611c687bf04b232f 200 Gene3D G3DSA:3.90.226.10 2 196 2.0E-63 T 14-10-2018 JO40_13195 f63b884bff4d8424611c687bf04b232f 200 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 194 34.253 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_13195 f63b884bff4d8424611c687bf04b232f 200 SUPERFAMILY SSF52096 22 196 1.08E-54 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO40_13195 f63b884bff4d8424611c687bf04b232f 200 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 14-10-2018 IPR033135 ClpP, histidine active site JO40_13195 f63b884bff4d8424611c687bf04b232f 200 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 5.0E-28 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_13195 f63b884bff4d8424611c687bf04b232f 200 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 5.0E-28 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_13195 f63b884bff4d8424611c687bf04b232f 200 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 5.0E-28 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_13195 f63b884bff4d8424611c687bf04b232f 200 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 5.0E-28 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO40_13195 f63b884bff4d8424611c687bf04b232f 200 Pfam PF00574 Clp protease 19 193 9.6E-66 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JO40_10485 577e35c9032b0b7334299084de911d3e 187 Pfam PF02417 Chromate transporter 5 183 5.5E-40 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 JO40_11225 dd1f12934082494f94358b318a7b86b2 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 5.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO40_11225 dd1f12934082494f94358b318a7b86b2 125 SUPERFAMILY SSF46785 7 81 4.61E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_11225 dd1f12934082494f94358b318a7b86b2 125 Gene3D G3DSA:1.10.10.10 11 125 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_11225 dd1f12934082494f94358b318a7b86b2 125 SMART SM00345 18 77 3.3E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO40_10780 5acb3ef3878877174bd5116edc53f2f9 620 Pfam PF01496 V-type ATPase 116kDa subunit family 193 526 8.8E-14 T 14-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO40_11120 add91b49ec6c3fd447af497e5942913e 313 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 303 5.0E-69 T 14-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 JO40_11120 add91b49ec6c3fd447af497e5942913e 313 Pfam PF03812 2-keto-3-deoxygluconate permease 3 308 2.4E-116 T 14-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 JO40_12220 a9ab95a13c3e46017182a942fcad2ba4 197 Gene3D G3DSA:3.40.50.1820 1 183 6.0E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_12220 a9ab95a13c3e46017182a942fcad2ba4 197 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 103 4.8E-8 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA JO40_09645 be963b224dd76c15fbd116301fce421c 425 Pfam PF13173 AAA domain 25 138 4.4E-12 T 14-10-2018 JO40_09645 be963b224dd76c15fbd116301fce421c 425 Pfam PF13635 Domain of unknown function (DUF4143) 204 369 1.8E-21 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 JO40_08700 78997ccafd81e0de03e2ec958b71e17e 226 SUPERFAMILY SSF56300 2 215 2.6E-17 T 14-10-2018 JO40_08700 78997ccafd81e0de03e2ec958b71e17e 226 Pfam PF00149 Calcineurin-like phosphoesterase 25 198 1.8E-4 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JO40_08700 78997ccafd81e0de03e2ec958b71e17e 226 Gene3D G3DSA:3.60.21.10 43 216 1.2E-6 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO40_08785 f376c67304eae84b3197f03ad44e13c4 274 SUPERFAMILY SSF143597 43 239 1.44E-57 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily JO40_08785 f376c67304eae84b3197f03ad44e13c4 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 117 234 6.5E-40 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal JO40_08785 f376c67304eae84b3197f03ad44e13c4 274 PIRSF PIRSF004793 6 264 2.5E-85 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 JO40_08785 f376c67304eae84b3197f03ad44e13c4 274 Hamap MF_01499 Diadenylate cyclase [dacA]. 2 253 30.009 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 JO40_08785 f376c67304eae84b3197f03ad44e13c4 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 12 249 7.1E-67 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 JO40_08785 f376c67304eae84b3197f03ad44e13c4 274 Gene3D G3DSA:3.40.1700.10 102 253 4.6E-53 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily JO40_09420 bc7129c7b3aa2de240a6e506653478e4 238 Pfam PF02361 Cobalt transport protein 33 193 2.6E-8 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO40_03060 a0d5819e23fe503b29b7cb4bd4aed3e3 177 Gene3D G3DSA:2.60.40.4070 85 143 9.2E-6 T 14-10-2018 JO40_03060 a0d5819e23fe503b29b7cb4bd4aed3e3 177 Pfam PF10029 Predicted periplasmic protein (DUF2271) 29 155 5.9E-26 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 JO40_09730 66071359f53e8ca040279fb0523f612a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 203 222 3.8E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_09730 66071359f53e8ca040279fb0523f612a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 223 242 3.8E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_09730 66071359f53e8ca040279fb0523f612a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 166 190 3.8E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_09730 66071359f53e8ca040279fb0523f612a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 54 75 3.8E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_09730 66071359f53e8ca040279fb0523f612a 285 Pfam PF01061 ABC-2 type transporter 35 243 3.8E-24 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 JO40_09180 73fb41d73ee70d570e11ff325d917380 60 Gene3D G3DSA:3.30.920.30 1 59 3.1E-26 T 14-10-2018 IPR038570 HicA superfamily JO40_09180 73fb41d73ee70d570e11ff325d917380 60 SUPERFAMILY SSF54786 1 60 2.63E-17 T 14-10-2018 JO40_09180 73fb41d73ee70d570e11ff325d917380 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 6.4E-21 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 JO40_03245 23ea4bb87a419f7079738d6870e6e4bd 154 SUPERFAMILY SSF55961 7 150 1.25E-5 T 14-10-2018 JO40_10880 8b4a87c6a357d9193491756b4d996fcd 142 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 32 133 4.4E-23 T 14-10-2018 IPR018673 Protein of unknown function DUF2141 JO40_03190 c32963f6a47022a47f447bbeaa255c6f 184 Gene3D G3DSA:3.40.50.360 1 183 2.4E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_03190 c32963f6a47022a47f447bbeaa255c6f 184 Pfam PF02525 Flavodoxin-like fold 2 171 2.3E-31 T 14-10-2018 IPR003680 Flavodoxin-like fold JO40_03190 c32963f6a47022a47f447bbeaa255c6f 184 SUPERFAMILY SSF52218 1 178 1.46E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO40_10230 d55966613e6fca0959237ec4fe48ae61 91 Gene3D G3DSA:1.10.260.40 12 90 9.2E-6 T 14-10-2018 JO40_10230 d55966613e6fca0959237ec4fe48ae61 91 SUPERFAMILY SSF47413 20 88 1.63E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO40_10060 e8a6bc9b0abeaacd8fc773878d0057e9 330 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 78 251 7.0E-8 T 14-10-2018 IPR003776 YcaO-like domain JO40_11765 7a3bdedadd59f3dac2e5aefafe4c9981 298 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 7 295 3.7E-108 T 14-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO40_11765 7a3bdedadd59f3dac2e5aefafe4c9981 298 Pfam PF03313 Serine dehydratase alpha chain 19 279 9.0E-74 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit JO40_01530 70ef20fe9ff964a84e3aac5426453cf5 212 Pfam PF13346 ABC-2 family transporter protein 3 208 2.3E-30 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like JO40_07400 3b46fc17372fc942f34e60a8531f2317 388 Pfam PF12698 ABC-2 family transporter protein 15 371 1.3E-32 T 14-10-2018 JO40_02615 e347db913c0034f428eab41a56ffb7e8 328 Pfam PF03781 Sulfatase-modifying factor enzyme 1 78 325 9.2E-40 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO40_02615 e347db913c0034f428eab41a56ffb7e8 328 Gene3D G3DSA:3.90.1580.10 49 328 7.9E-103 T 14-10-2018 JO40_02615 e347db913c0034f428eab41a56ffb7e8 328 SUPERFAMILY SSF56436 81 325 3.3E-50 T 14-10-2018 IPR016187 C-type lectin fold JO40_08750 a241b84c270fd73eea97a5896711eb94 249 Gene3D G3DSA:3.30.70.1230 41 225 6.0E-9 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_08750 a241b84c270fd73eea97a5896711eb94 249 SUPERFAMILY SSF55073 41 196 2.04E-11 T 14-10-2018 IPR029787 Nucleotide cyclase JO40_08605 7620fd8a4c6744329b8beacfb6ba85d0 309 Gene3D G3DSA:3.40.50.1980 132 306 4.5E-46 T 14-10-2018 JO40_08605 7620fd8a4c6744329b8beacfb6ba85d0 309 SUPERFAMILY SSF53807 47 306 2.0E-53 T 14-10-2018 JO40_08605 7620fd8a4c6744329b8beacfb6ba85d0 309 Pfam PF01497 Periplasmic binding protein 49 282 1.6E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JO40_08605 7620fd8a4c6744329b8beacfb6ba85d0 309 Gene3D G3DSA:3.40.50.1980 46 131 4.5E-23 T 14-10-2018 JO40_07605 cf269052727fc06137965a97d642529d 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 226 3.3E-20 T 14-10-2018 JO40_07605 cf269052727fc06137965a97d642529d 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 2.8E-44 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_08940 8cbaa79083d1a3ef55c5214b9a145e67 237 Pfam PF16481 Domain of unknown function (DUF5058) 10 225 2.3E-45 T 14-10-2018 IPR032479 Protein of unknown function DUF5058 JO40_07530 a3196b903054efe795742dab2c4590c9 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 196 46.399 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 JO40_07530 a3196b903054efe795742dab2c4590c9 199 Pfam PF01725 Ham1 family 3 187 1.8E-53 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 JO40_07530 a3196b903054efe795742dab2c4590c9 199 SUPERFAMILY SSF52972 1 191 1.36E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO40_07530 a3196b903054efe795742dab2c4590c9 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 190 8.9E-56 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 JO40_07530 a3196b903054efe795742dab2c4590c9 199 Gene3D G3DSA:3.90.950.10 1 196 1.9E-67 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO40_08890 525b37e15c10e9c8be420ff2bf182ce1 158 Gene3D G3DSA:2.30.110.10 1 157 9.2E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO40_08890 525b37e15c10e9c8be420ff2bf182ce1 158 SUPERFAMILY SSF50475 1 155 2.75E-40 T 14-10-2018 JO40_08890 525b37e15c10e9c8be420ff2bf182ce1 158 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 10 153 4.4E-14 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related JO40_13040 ff29446da0d5412b2f81da7c64372a22 365 SUPERFAMILY SSF50969 136 333 4.47E-11 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like JO40_13040 ff29446da0d5412b2f81da7c64372a22 365 Gene3D G3DSA:2.130.10.10 128 362 1.1E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO40_04575 a89f8a47b2a34f8e9f25c73ab510c549 316 Pfam PF07238 PilZ domain 146 239 8.1E-8 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JO40_06630 17791fbb6d200839cbcdd233966596f9 343 Gene3D G3DSA:1.10.3470.10 5 341 9.4E-89 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_06630 17791fbb6d200839cbcdd233966596f9 343 SUPERFAMILY SSF81345 5 333 5.23E-71 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_06630 17791fbb6d200839cbcdd233966596f9 343 Pfam PF01032 FecCD transport family 19 333 1.6E-79 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JO40_02655 49daea9dd801be4fc4cf0353c08162e3 311 SUPERFAMILY SSF102114 13 240 4.19E-30 T 14-10-2018 JO40_02655 49daea9dd801be4fc4cf0353c08162e3 311 SMART SM00729 15 233 5.8E-24 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO40_02655 49daea9dd801be4fc4cf0353c08162e3 311 Pfam PF04055 Radical SAM superfamily 20 177 8.5E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO40_02655 49daea9dd801be4fc4cf0353c08162e3 311 Gene3D G3DSA:3.80.30.20 24 243 5.0E-14 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO40_07555 70abb3958f9b35ed422bc8ade7c33631 236 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 130 226 8.4E-27 T 14-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold JO40_07555 70abb3958f9b35ed422bc8ade7c33631 236 Gene3D G3DSA:4.10.520.10 25 114 1.4E-47 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO40_07555 70abb3958f9b35ed422bc8ade7c33631 236 Gene3D G3DSA:2.70.50.70 22 226 1.4E-47 T 14-10-2018 JO40_07555 70abb3958f9b35ed422bc8ade7c33631 236 Pfam PF14848 DNA-binding domain 1 122 1.5E-40 T 14-10-2018 JO40_01325 fa525ca8c92608b8c65d3ae912ea5f0f 226 Pfam PF04298 Putative neutral zinc metallopeptidase 7 222 2.6E-90 T 14-10-2018 IPR007395 Putative neutral zinc metallopeptidase JO40_02700 92e77329d93b8b6be419979a8ea7bdd5 258 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 24 253 2.8E-87 T 14-10-2018 IPR014127 Conserved hypothetical protein CHP02757 JO40_02700 92e77329d93b8b6be419979a8ea7bdd5 258 Pfam PF09674 Protein of unknown function (DUF2400) 28 251 4.7E-77 T 14-10-2018 IPR014127 Conserved hypothetical protein CHP02757 JO40_09150 b15fe61d62390322d6839045fa1cb240 190 SUPERFAMILY SSF55729 1 185 4.4E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO40_09150 b15fe61d62390322d6839045fa1cb240 190 Gene3D G3DSA:3.40.630.30 1 186 2.2E-12 T 14-10-2018 JO40_03225 e31ea4efbf897ef676be1c90e8fd20fa 205 Gene3D G3DSA:3.40.50.1820 2 199 5.5E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_03225 e31ea4efbf897ef676be1c90e8fd20fa 205 SUPERFAMILY SSF53474 4 197 4.02E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_06140 509ab8c2f0719c580195f3a830935f95 278 Pfam PF02517 CAAX protease self-immunity 143 232 2.5E-23 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO40_08830 083cada889338750f10e45d6ef7e6420 99 Pfam PF05164 Cell division protein ZapA 7 93 7.5E-8 T 14-10-2018 IPR007838 Cell division protein ZapA-like JO40_08830 083cada889338750f10e45d6ef7e6420 99 SUPERFAMILY SSF102829 6 71 1.06E-6 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily JO40_09415 61d015ac16216f8e2f4efc984b092668 199 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 8 191 2.0E-39 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_09415 61d015ac16216f8e2f4efc984b092668 199 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 6 192 1.4E-54 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_01460 ba20ed4ddbe34c430c1ed4904f13787e 462 Pfam PF01554 MatE 24 188 1.5E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_01460 ba20ed4ddbe34c430c1ed4904f13787e 462 Pfam PF01554 MatE 262 401 8.4E-10 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_01460 ba20ed4ddbe34c430c1ed4904f13787e 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 420 9.3E-45 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_08530 af4917c25405205c34a68309469f6d09 286 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 285 6.8E-53 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO40_08530 af4917c25405205c34a68309469f6d09 286 Pfam PF12784 PD-(D/E)XK nuclease family transposase 14 169 8.9E-15 T 14-10-2018 JO40_03330 5c826260def1095a161228eafd6ebabf 305 SUPERFAMILY SSF53187 68 289 5.24E-15 T 14-10-2018 JO40_03330 5c826260def1095a161228eafd6ebabf 305 Pfam PF04389 Peptidase family M28 68 230 1.8E-11 T 14-10-2018 IPR007484 Peptidase M28 JO40_08115 69f0341f427a7c3d9de7fd77983e0334 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_08115 69f0341f427a7c3d9de7fd77983e0334 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_08115 69f0341f427a7c3d9de7fd77983e0334 217 Gene3D G3DSA:1.10.357.10 10 151 2.5E-21 T 14-10-2018 JO40_08115 69f0341f427a7c3d9de7fd77983e0334 217 SUPERFAMILY SSF46689 14 79 1.75E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO40_08115 69f0341f427a7c3d9de7fd77983e0334 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO40_05880 fe590059cef9b9d85e9b2b063004980e 181 Pfam PF03748 Flagellar basal body-associated protein FliL 102 176 1.2E-6 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 JO40_08905 094d1dafb3129847b3abaf2650b5edfc 213 Pfam PF12952 Domain of unknown function (DUF3841) 19 196 2.1E-57 T 14-10-2018 IPR024211 Protein of unknown function DUF3841 JO40_09855 c13d054354126bec60e170ca7a25a6c2 121 Gene3D G3DSA:2.60.120.10 1 119 3.9E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO40_09855 c13d054354126bec60e170ca7a25a6c2 121 Pfam PF05523 WxcM-like, C-terminal 3 112 6.1E-15 T 14-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 JO40_09855 c13d054354126bec60e170ca7a25a6c2 121 SUPERFAMILY SSF51182 2 111 1.02E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO40_05850 beb7d195282342515e2d1db7e6f44bdb 457 Pfam PF02120 Flagellar hook-length control protein FliK 331 404 9.9E-16 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal JO40_05850 beb7d195282342515e2d1db7e6f44bdb 457 Gene3D G3DSA:3.30.750.140 306 419 2.0E-10 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily JO40_02620 02720316402b523602aed593b73076fa 373 SUPERFAMILY SSF56436 89 371 1.15E-52 T 14-10-2018 IPR016187 C-type lectin fold JO40_02620 02720316402b523602aed593b73076fa 373 Gene3D G3DSA:3.90.1580.10 73 373 1.2E-77 T 14-10-2018 JO40_02620 02720316402b523602aed593b73076fa 373 Pfam PF03781 Sulfatase-modifying factor enzyme 1 90 370 7.6E-43 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO40_09500 e0e00e2f9ba7f880519aef63486e79bc 114 SUPERFAMILY SSF143011 6 97 2.75E-6 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_09500 e0e00e2f9ba7f880519aef63486e79bc 114 Gene3D G3DSA:3.30.2310.20 2 102 1.9E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO40_09500 e0e00e2f9ba7f880519aef63486e79bc 114 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 98 7.0E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO40_01155 4e2031a8a86af99c32ec2268162660dd 347 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 4 347 4.8E-161 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO40_01155 4e2031a8a86af99c32ec2268162660dd 347 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 5 347 3.7E-145 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO40_10480 f5d1d88d9048517460c498700bde0ddf 194 Pfam PF02417 Chromate transporter 12 176 1.2E-43 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 JO40_07330 9c6576b76deba7b27ce238d310cc1d9e 137 Pfam PF02699 Preprotein translocase subunit 21 95 2.4E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC JO40_07330 9c6576b76deba7b27ce238d310cc1d9e 137 PRINTS PR01853 Bacterial YajC preprotein translocase signature 18 38 6.0E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC JO40_07330 9c6576b76deba7b27ce238d310cc1d9e 137 PRINTS PR01853 Bacterial YajC preprotein translocase signature 56 74 6.0E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC JO40_07330 9c6576b76deba7b27ce238d310cc1d9e 137 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 18 98 2.3E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC JO40_07330 9c6576b76deba7b27ce238d310cc1d9e 137 SMART SM01323 16 98 1.9E-41 T 14-10-2018 IPR003849 Preprotein translocase YajC JO40_01900 577fd26b8429aea826dad60191d09ebe 154 Pfam PF13038 Domain of unknown function (DUF3899) 62 149 3.9E-11 T 14-10-2018 IPR025007 Domain of unknown function DUF3899 JO40_08555 8736d4a04554c3a8c86b395cc9a0007c 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 283 1.4E-43 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO40_00930 3b3db6b1b5e24ee96f3bb0e43f34d20d 536 Pfam PF08011 PD-(D/E)XK nuclease superfamily 440 531 6.2E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO40_00930 3b3db6b1b5e24ee96f3bb0e43f34d20d 536 Pfam PF09820 Predicted AAA-ATPase 8 290 1.5E-102 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO40_05080 2de36753b85f9396668045f0eda599be 1556 SUPERFAMILY SSF81296 947 1010 2.45E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set JO40_05080 2de36753b85f9396668045f0eda599be 1556 Gene3D G3DSA:2.60.40.650 939 1017 3.3E-5 T 14-10-2018 JO40_05080 2de36753b85f9396668045f0eda599be 1556 Gene3D G3DSA:2.60.40.10 80 172 1.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO40_04190 29cb3715f153dfa401b8ab2a9821ed96 340 Gene3D G3DSA:3.20.20.210 1 328 8.2E-58 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_04190 29cb3715f153dfa401b8ab2a9821ed96 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 326 2.8E-61 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JO40_04190 29cb3715f153dfa401b8ab2a9821ed96 340 SUPERFAMILY SSF51726 1 326 9.81E-52 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JO40_11595 9c2281e9991655efdc4cbcac8826ae96 173 Pfam PF11848 Domain of unknown function (DUF3368) 115 159 1.4E-10 T 14-10-2018 IPR021799 Protein of unknown function DUF3368 JO40_06820 8cb1346825bb1411a412fc6ab7fdcf30 65 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 1.2E-16 T 14-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB JO40_00155 c7a2d1ac8047dca31a974b5829b265da 406 SUPERFAMILY SSF50182 184 250 4.25E-9 T 14-10-2018 IPR010920 LSM domain superfamily JO40_00155 c7a2d1ac8047dca31a974b5829b265da 406 Pfam PF00924 Mechanosensitive ion channel 142 394 5.1E-39 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JO40_08600 15c3891758bd6c15ac3ac4826f0b119a 327 Gene3D G3DSA:1.10.3470.10 5 327 2.9E-103 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_08600 15c3891758bd6c15ac3ac4826f0b119a 327 Pfam PF01032 FecCD transport family 19 326 2.2E-99 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JO40_08600 15c3891758bd6c15ac3ac4826f0b119a 327 SUPERFAMILY SSF81345 5 326 1.7E-88 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO40_02095 fd118c7d0a0e6656bce5a2551327a500 919 Pfam PF11369 Protein of unknown function (DUF3160) 220 913 1.2E-185 T 14-10-2018 IPR022601 Protein of unknown function DUF3160 JO40_02095 fd118c7d0a0e6656bce5a2551327a500 919 SMART SM01325 217 914 2.3E-290 T 14-10-2018 IPR022601 Protein of unknown function DUF3160 JO40_10135 64cc1145a25ed2eecf46c77f2fe2b679 71 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 18 56 3.3E-6 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JO40_03065 ddfc41852694ca6020578e70bd8a74f2 151 Pfam PF09406 Protein of unknown function (DUF2004) 62 151 1.5E-24 T 14-10-2018 IPR018546 Protein of unknown function DUF2004 JO40_09540 8cf35d0a3b0104c0be33b3e9ca7b2bd9 215 Pfam PF06912 Protein of unknown function (DUF1275) 15 206 1.2E-26 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 JO40_06020 4163b975765ce25b0f94c57fc13993c4 239 Pfam PF16481 Domain of unknown function (DUF5058) 5 228 5.2E-72 T 14-10-2018 IPR032479 Protein of unknown function DUF5058 JO40_13115 ce2a1bf5f6b61c5e6f2bb5a3f28d01f1 354 Gene3D G3DSA:1.25.40.10 27 212 4.8E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_13115 ce2a1bf5f6b61c5e6f2bb5a3f28d01f1 354 SUPERFAMILY SSF48452 80 201 2.28E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO40_04295 2bb06971072396402688efa56348ed9b 69 Pfam PF10047 Protein of unknown function (DUF2281) 5 68 2.3E-16 T 14-10-2018 IPR018739 Domain of unknown function DUF2281 JO40_13370 15bd0811362818f89ec4958acde91210 285 Pfam PF08478 POTRA domain, FtsQ-type 64 130 1.8E-15 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type JO40_03480 7cdc925ee7ed0f6f0db0f3ce5449c0b7 661 Pfam PF13598 Domain of unknown function (DUF4139) 211 495 1.3E-11 T 14-10-2018 IPR037291 Domain of unknown function DUF4139 JO40_08135 79675c97b928868e6142b18bd37f88dd 234 Pfam PF02361 Cobalt transport protein 5 195 4.3E-19 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO40_09640 1615d59ef9a9ce63c6071e0b567376bc 207 Pfam PF09335 SNARE associated Golgi protein 56 160 4.1E-10 T 14-10-2018 IPR032816 SNARE associated Golgi protein JO40_10195 b446f07eab55fdc3af7195edb0318cd5 118 Pfam PF01934 Protein of unknown function DUF86 15 105 1.6E-24 T 14-10-2018 IPR008201 Protein of unknown function DUF86 JO40_12080 90283e96029701f3489b9d1c76711cf6 164 Pfam PF02517 CAAX protease self-immunity 45 155 1.0E-10 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO40_02420 66c5d0da8f4a17815fe1d40322409971 212 Pfam PF12762 ISXO2-like transposase domain 70 195 1.6E-6 T 14-10-2018 IPR024445 ISXO2-like transposase domain JO40_02420 66c5d0da8f4a17815fe1d40322409971 212 SMART SM01126 66 195 8.0E-4 T 14-10-2018 IPR024445 ISXO2-like transposase domain JO40_01845 49e1ce55d15be8670834b41ed5a77a31 279 Gene3D G3DSA:2.30.30.40 33 109 4.0E-11 T 14-10-2018 JO40_01845 49e1ce55d15be8670834b41ed5a77a31 279 Pfam PF08239 Bacterial SH3 domain 42 103 2.7E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type JO40_02460 7aa07fd6ab214bc113907c1bd7cf1701 257 Pfam PF02544 3-oxo-5-alpha-steroid 4-dehydrogenase 104 257 3.2E-36 T 14-10-2018 IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal GO:0005737|GO:0006629|GO:0016021|GO:0016627 JO40_02460 7aa07fd6ab214bc113907c1bd7cf1701 257 PIRSF PIRSF015596 1 257 2.1E-87 T 14-10-2018 IPR016636 3-oxo-5-alpha-steroid 4-dehydrogenase GO:0003865|GO:0008202|GO:0016020|GO:0055114 KEGG: 00140+1.3.1.22|KEGG: 00905+1.3.1.22|MetaCyc: PWY-6032|MetaCyc: PWY-7455|Reactome: R-HSA-193048 JO40_01815 6c995f47ab0854368580ae0732dafd9e 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 169 188 9.3E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_01815 6c995f47ab0854368580ae0732dafd9e 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 132 156 9.3E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_01815 6c995f47ab0854368580ae0732dafd9e 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 189 208 9.3E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_01815 6c995f47ab0854368580ae0732dafd9e 249 Pfam PF01061 ABC-2 type transporter 3 211 7.8E-27 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 JO40_01815 6c995f47ab0854368580ae0732dafd9e 249 PIRSF PIRSF006648 1 245 1.4E-24 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JO40_09305 be33d1debcaf3bf4633ed3a3b53b6658 311 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 72 259 2.4E-19 T 14-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal JO40_09305 be33d1debcaf3bf4633ed3a3b53b6658 311 SUPERFAMILY SSF53474 46 263 7.39E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_09305 be33d1debcaf3bf4633ed3a3b53b6658 311 Gene3D G3DSA:3.40.50.1820 9 271 3.3E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_09830 f736882566dd6e5d3a0f1d38b082dc99 411 Gene3D G3DSA:3.90.550.10 4 220 2.7E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_09830 f736882566dd6e5d3a0f1d38b082dc99 411 Pfam PF00535 Glycosyl transferase family 2 10 102 4.5E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO40_09830 f736882566dd6e5d3a0f1d38b082dc99 411 SUPERFAMILY SSF53448 7 229 3.28E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO40_05865 2d4794c0c469d0e64aa413f436cae6ea 65 Pfam PF06289 Flagellar protein (FlbD) 1 58 8.5E-25 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like JO40_10510 b6458fbc3bf6df34ead1f716cde7c041 56 SUPERFAMILY SSF54862 1 55 3.97E-18 T 14-10-2018 JO40_10510 b6458fbc3bf6df34ead1f716cde7c041 56 Gene3D G3DSA:3.30.70.20 2 55 1.9E-19 T 14-10-2018 JO40_10510 b6458fbc3bf6df34ead1f716cde7c041 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO40_10510 b6458fbc3bf6df34ead1f716cde7c041 56 Pfam PF00037 4Fe-4S binding domain 32 54 1.8E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_10510 b6458fbc3bf6df34ead1f716cde7c041 56 Pfam PF00037 4Fe-4S binding domain 4 25 1.2E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO40_09590 f78c4631233b643a7a648da8f064bc54 344 Pfam PF03116 NQR2, RnfD, RnfE family 10 332 5.6E-48 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 JO40_03865 28145457fda04fd4b100ddfd1d21a8c8 213 SUPERFAMILY SSF101262 3 212 3.92E-61 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 JO40_03865 28145457fda04fd4b100ddfd1d21a8c8 213 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 192 9.8E-67 T 14-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 JO40_03865 28145457fda04fd4b100ddfd1d21a8c8 213 Gene3D G3DSA:1.20.120.680 7 213 4.2E-72 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 JO40_09755 906a7356c5d9cef8c0665ab3dc60ac3e 287 Pfam PF02485 Core-2/I-Branching enzyme 3 244 1.4E-10 T 14-10-2018 IPR003406 Glycosyl transferase, family 14 GO:0008375|GO:0016020 JO40_06115 daadf18d0e5bc56a705f21f7d78fa9be 256 Pfam PF06738 Putative threonine/serine exporter 12 247 9.0E-69 T 14-10-2018 IPR010619 Putative threonine/serine exporter JO40_10785 13f2107da273e898ff5278b5239f2d2a 140 Gene3D G3DSA:1.20.120.610 1 140 1.6E-16 T 14-10-2018 JO40_10785 13f2107da273e898ff5278b5239f2d2a 140 SUPERFAMILY SSF81333 74 138 1.11E-11 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily JO40_10785 13f2107da273e898ff5278b5239f2d2a 140 Pfam PF00137 ATP synthase subunit C 80 138 3.7E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 JO40_10785 13f2107da273e898ff5278b5239f2d2a 140 Pfam PF00137 ATP synthase subunit C 6 65 6.5E-5 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 JO40_02455 053e44e80345f8defedb12e12df2b1cd 280 Pfam PF02517 CAAX protease self-immunity 146 232 9.6E-22 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO40_05130 2f91d281c536c7ab20c93e32e79be237 1507 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1149 1421 2.9E-5 T 14-10-2018 IPR007452 Translocation and assembly module TamB JO40_04690 86dd3d670277b30c8ee6d3f615678095 332 Pfam PF06166 Protein of unknown function (DUF979) 14 332 2.0E-111 T 14-10-2018 IPR009323 Protein of unknown function DUF979 JO40_09885 6dbf8153010b27b1106222f3032d5453 101 SUPERFAMILY SSF81301 10 91 6.27E-12 T 14-10-2018 JO40_09885 6dbf8153010b27b1106222f3032d5453 101 Pfam PF01909 Nucleotidyltransferase domain 11 53 3.1E-8 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JO40_09885 6dbf8153010b27b1106222f3032d5453 101 Gene3D G3DSA:3.30.460.10 2 101 5.8E-18 T 14-10-2018 JO40_07470 c5f0082ffc8f0fad9293c708025cc6ae 410 Pfam PF02687 FtsX-like permease family 313 404 4.0E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO40_07470 c5f0082ffc8f0fad9293c708025cc6ae 410 Pfam PF12704 MacB-like periplasmic core domain 19 248 2.8E-18 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO40_09245 6896b1bf4dcccd0f3ad3e59450247783 155 Pfam PF02674 Colicin V production protein 7 145 6.6E-28 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 JO40_11885 c92401725f02d6ec3ce76cfe9569dd25 104 Gene3D G3DSA:1.10.10.10 12 104 1.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO40_11885 c92401725f02d6ec3ce76cfe9569dd25 104 SUPERFAMILY SSF46785 18 102 2.06E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO40_11885 c92401725f02d6ec3ce76cfe9569dd25 104 Pfam PF13601 Winged helix DNA-binding domain 24 103 2.1E-28 T 14-10-2018 IPR027395 Winged helix DNA-binding domain JO40_08065 62297b22f0c4d50ac9edf6e4d8a230ab 381 Pfam PF15428 Immunity protein 26 164 281 1.4E-24 T 14-10-2018 IPR029278 Immunity protein 26 JO40_04650 167c13662635c10ab18a39ba3ae44ced 262 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 2.5E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JO40_00060 1cb1a3e0173936d06b0fa6bc2cdb8f12 285 Pfam PF01148 Cytidylyltransferase family 8 280 2.2E-47 T 14-10-2018 JO40_07950 d0a518fecff68ce098e1199812409260 284 Pfam PF00156 Phosphoribosyl transferase domain 220 282 3.8E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO40_07950 d0a518fecff68ce098e1199812409260 284 SUPERFAMILY SSF53271 118 282 2.81E-14 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO40_07950 d0a518fecff68ce098e1199812409260 284 Gene3D G3DSA:3.40.50.2020 175 283 4.5E-10 T 14-10-2018 JO40_08545 16305c97c7126a5b3e83748ed73e317e 153 Gene3D G3DSA:3.90.960.10 3 153 7.3E-40 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO40_08545 16305c97c7126a5b3e83748ed73e317e 153 SUPERFAMILY SSF55826 5 145 7.06E-34 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO40_08545 16305c97c7126a5b3e83748ed73e317e 153 Pfam PF04073 Aminoacyl-tRNA editing domain 26 141 1.4E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JO40_03005 20e9bc796ad4b2c5bf28aa3f0007f878 238 SUPERFAMILY SSF52058 58 210 1.09E-12 T 14-10-2018 JO40_03005 20e9bc796ad4b2c5bf28aa3f0007f878 238 Gene3D G3DSA:3.80.10.10 25 238 4.0E-16 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO40_01150 12534324af1f6c6770cefd041187d279 74 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 1 74 8.0E-32 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO40_08275 cdb57068cc7d381dcb5553a814d0f101 293 Pfam PF01643 Acyl-ACP thioesterase 136 279 6.9E-17 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 JO40_08275 cdb57068cc7d381dcb5553a814d0f101 293 Pfam PF01643 Acyl-ACP thioesterase 5 132 2.3E-12 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 JO40_08275 cdb57068cc7d381dcb5553a814d0f101 293 SUPERFAMILY SSF54637 181 279 9.54E-16 T 14-10-2018 IPR029069 HotDog domain superfamily JO40_08275 cdb57068cc7d381dcb5553a814d0f101 293 SUPERFAMILY SSF54637 2 168 2.93E-22 T 14-10-2018 IPR029069 HotDog domain superfamily JO40_03310 79234f08577bbfd4128edadb44ca7014 569 Pfam PF17239 Family of unknown function (DUF5312) 6 558 1.3E-215 T 14-10-2018 IPR035196 Protein of unknown function DUF5312 JO40_05705 5c0f1abc6386257065b640795cf3029c 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 11 196 7.7E-57 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_05705 5c0f1abc6386257065b640795cf3029c 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 9 196 3.1E-60 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO40_00640 147ace5d5b7860b788d62261fa428826 329 Gene3D G3DSA:1.25.40.920 49 325 2.4E-83 T 14-10-2018 IPR038537 TatT superfamily JO40_00640 147ace5d5b7860b788d62261fa428826 329 Pfam PF16811 TRAP transporter T-component 54 323 4.3E-95 T 14-10-2018 IPR031823 TRAP transporter T-component JO40_12110 ce02882454d5b2e3f25c372ac4b4def6 63 Pfam PF09499 ApaLI-like restriction endonuclease 1 42 1.9E-17 T 14-10-2018 IPR019036 Restriction endonuclease, type II, ApaLI JO40_08980 912acf61a7188ca1b2ebb168b620c44e 488 SUPERFAMILY SSF111283 6 483 1.07E-81 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JO40_08980 912acf61a7188ca1b2ebb168b620c44e 488 Pfam PF01523 Putative modulator of DNA gyrase 24 326 5.6E-38 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JO40_05625 ae5582f71e48640e50c36d512591fdf4 221 Pfam PF02517 CAAX protease self-immunity 122 209 8.1E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO40_06575 ef031c0d5cbf64df41758b7fdebc1419 243 Pfam PF06182 ABC-2 family transporter protein 34 184 1.6E-11 T 14-10-2018 IPR010390 Protein of unknown function DUF990 JO40_04735 7a33a04132adeee3384f9029ec51aae2 467 Pfam PF01554 MatE 264 425 4.6E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_04735 7a33a04132adeee3384f9029ec51aae2 467 Pfam PF01554 MatE 33 193 3.6E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_04735 7a33a04132adeee3384f9029ec51aae2 467 PIRSF PIRSF006603 11 467 1.6E-108 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_04735 7a33a04132adeee3384f9029ec51aae2 467 TIGRFAM TIGR00797 matE: MATE efflux family protein 33 439 2.3E-70 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO40_11040 7efb8ac8247523916112a6578d34db4c 161 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 44 154 6.0E-10 T 14-10-2018 JO40_01615 56a239edc6effa4e46e7aaf30542e326 168 SUPERFAMILY SSF53927 17 159 3.17E-34 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JO40_01615 56a239edc6effa4e46e7aaf30542e326 168 Gene3D G3DSA:3.40.140.10 12 165 2.2E-44 T 14-10-2018 JO40_01615 56a239edc6effa4e46e7aaf30542e326 168 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 15 134 1.0E-27 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JO40_01615 56a239edc6effa4e46e7aaf30542e326 168 PIRSF PIRSF006019 6 167 2.0E-45 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JO40_01615 56a239edc6effa4e46e7aaf30542e326 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 89 124 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JO40_00485 7c6328813320fcb7b09cdc89e5253f54 62 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 1 57 8.3E-7 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 JO40_08240 32bc254950f55cbe3ebee60139f960bd 221 Pfam PF07099 Protein of unknown function (DUF1361) 45 204 7.0E-42 T 14-10-2018 IPR009793 Protein of unknown function DUF1361 JO40_06235 051866ea26393b86e11fcfa7c9a8819d 439 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 4 436 2.0E-142 T 14-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 JO40_11430 f9d425792e85aaadb81b8f9f029313f4 320 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 6 82 1.2E-16 T 14-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 JO40_12070 e88a18bc7eac3b7149794120bbc44d47 390 SUPERFAMILY SSF48371 102 361 5.76E-7 T 14-10-2018 IPR016024 Armadillo-type fold JO40_11455 ce068a9c33274167f57f95a293311bfc 134 Pfam PF10882 Bacterial PH domain 35 116 3.9E-6 T 14-10-2018 IPR027783 Bacterial Pleckstrin homology domain-related JO40_07310 6d6515418c1ba5c1ef79dc6ffb81805b 107 Pfam PF11823 Protein of unknown function (DUF3343) 4 91 2.6E-29 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 JO40_11755 7d1162043da8417c19d4c2bf87847ccc 131 Pfam PF14387 Domain of unknown function (DUF4418) 11 124 3.9E-30 T 14-10-2018 IPR025531 Protein of unknown function DUF4418 JO40_07865 b1f388bb7428f2baf77235e7ef7a97f4 226 Pfam PF02698 DUF218 domain 51 190 4.0E-17 T 14-10-2018 IPR003848 Domain of unknown function DUF218 JO40_10265 7e4d407984c257f6e0829825635420e5 232 Pfam PF15631 NTF2 fold immunity protein 168 231 2.1E-14 T 14-10-2018 IPR028921 NTF2 fold domain JO40_09625 e42f980f2c62e2a381fb049c605ebf95 725 Pfam PF03961 Flagellar Assembly Protein A 83 273 1.2E-12 T 14-10-2018 IPR005646 Flagellar assembly protein A JO40_09625 e42f980f2c62e2a381fb049c605ebf95 725 Pfam PF03961 Flagellar Assembly Protein A 289 711 2.1E-84 T 14-10-2018 IPR005646 Flagellar assembly protein A JO40_10225 2358aedddd8036d6b680a994b1e574a6 123 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 30 115 3.5E-13 T 14-10-2018 IPR009241 Toxin HigB-like JO40_01395 8e1ce4f585a41bbbcaf0180b6a15b57d 219 Pfam PF14353 CpXC protein 3 132 3.0E-25 T 14-10-2018 IPR025682 CpXC domain JO40_09925 87bd4b44f7ca8ad559e9091a8774daae 405 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 184 398 1.7E-12 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 JO40_09925 87bd4b44f7ca8ad559e9091a8774daae 405 Gene3D G3DSA:3.40.50.12580 203 372 3.1E-9 T 14-10-2018 JO40_00595 fb28d92fbcccd05182d7b1c86337f45e 299 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 226 3.8E-47 T 14-10-2018 JO40_08480 af2ebf5caf709c32d87db57072278936 302 SUPERFAMILY SSF56112 1 210 5.35E-8 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JO40_12235 296510a4195e9c88ecce5eee296c6385 434 Pfam PF00860 Permease family 17 394 1.3E-45 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JO40_12235 296510a4195e9c88ecce5eee296c6385 434 PIRSF PIRSF005353 1 434 2.2E-173 T 14-10-2018 IPR026033 Purine permease PbuG-like JO40_07820 69d7b032df3e76f96566a930e8f091cb 379 Pfam PF12698 ABC-2 family transporter protein 19 369 1.7E-23 T 14-10-2018 JO40_00160 a8695ff05f8544745f44a0e8a4f117c7 483 Pfam PF04200 Lipoprotein associated domain 63 120 5.4E-8 T 14-10-2018 IPR007326 Lipoprotein-associated domain JO40_03965 8d38d724d92178098966ac9a1971484d 86 Pfam PF11823 Protein of unknown function (DUF3343) 5 72 3.3E-14 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 JO40_07175 798ab7426fe0b28b87e1f445970b73cb 94 Gene3D G3DSA:3.40.50.1820 2 94 7.2E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO40_00125 08083fb542a58b6a739de437b2d83cd1 279 Pfam PF04018 Domain of unknown function (DUF368) 14 249 2.6E-51 T 14-10-2018 IPR007163 Protein of unknown function DUF368 JO40_01595 59e5e92d70e6fb3acac3cdc7985eb36a 377 Pfam PF03739 Predicted permease YjgP/YjgQ family 14 372 4.4E-66 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 JO40_07015 18a71cf2bbd81f9ae8961d9568146126 243 Pfam PF02361 Cobalt transport protein 14 213 1.1E-16 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO40_12075 6cd330824866b0672c18e2f64cb2a5f2 369 Pfam PF07238 PilZ domain 217 328 7.3E-10 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JO40_07270 fc991667cd3b44d4b3a9196da797097a 134 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 29 128 1.0E-35 T 14-10-2018 IPR019287 Holliday junction resolvase-related domain JO40_07215 4f130359f0b4c84f5a55d4cc444a793e 317 ProSitePatterns PS00018 EF-hand calcium-binding domain. 155 167 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JO40_01270 82fd043b84dfba32acb76d3bef6f9b04 393 Pfam PF07907 YibE/F-like protein 149 386 1.6E-84 T 14-10-2018 IPR012507 YibE/F-like JO40_08560 ff7f794a2a2e89ce7820b27477636a10 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 306 1.2E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO40_10675 e1a82d960a5a878f7b00c7b75cb03c03 138 Pfam PF04519 Polymer-forming cytoskeletal 13 110 1.1E-21 T 14-10-2018 IPR007607 Bactofilin A/B JO40_11080 39de4b0b2414c5ef8ddd64a4ec84b65d 148 Pfam PF03692 Putative zinc- or iron-chelating domain 14 117 1.3E-9 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein JO40_10905 46607815838decbe54cc68ef161001a9 175 Pfam PF09413 Putative prokaryotic signal transducing protein 74 128 1.0E-7 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 JO40_12140 e202e5b926f755b3fd4736b5b9096312 514 Pfam PF01973 Protein of unknown function DUF115 158 316 5.0E-13 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO40_10085 35e7d80a27c7750146ce6c3db1665d11 288 Pfam PF04754 Putative transposase, YhgA-like 10 160 2.4E-4 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like JO40_13160 25e7366691078b089eece35198e69fe6 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 328 3.2E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO40_10235 bdfc0c1342619ebfcfef62dc1d18c32d 256 SUPERFAMILY SSF50494 25 234 6.33E-9 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO40_02890 e1a00a44559dca2b2f40b9b7fb1f0c1f 216 Pfam PF14137 Domain of unknown function (DUF4304) 19 124 1.8E-10 T 14-10-2018 IPR025412 Protein of unknown function DUF4304 JO40_09345 4c7283d0a2e22011b47ee5565d756a66 88 TIGRFAM TIGR04341 target_ACGX: ACGX-repeat peptide 1 48 5.8E-8 T 14-10-2018 IPR027581 ACGX-repeat peptide JO40_01560 d1b2aabc6e98d84958f6fa1cbe0f774a 301 Pfam PF01145 SPFH domain / Band 7 family 30 200 1.1E-6 T 14-10-2018 IPR001107 Band 7 domain JO40_08010 3c25c90f0e239fc016be8692be8d6d91 199 Pfam PF10135 Rod binding protein 146 192 6.4E-12 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal JO40_10095 9dde7499da63adc07565edbf71f2c69f 319 Pfam PF13349 Putative adhesin 137 316 7.0E-14 T 14-10-2018 IPR025164 Putative adhesin