locus-tag class description DYE50_00010 PF00005 ABC transporter DYE50_00015 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_00025 PF00543 Nitrogen regulatory protein P-II DYE50_00045 PF01425 Amidase DYE50_00060 PF00293 NUDIX domain DYE50_00070 PF03422 Carbohydrate binding module (family 6) DYE50_00070 PF00331 Glycosyl hydrolase family 10 DYE50_00070 PF00756 Putative esterase DYE50_00070 PF00404 Dockerin type I domain DYE50_00075 PF03484 tRNA synthetase B5 domain DYE50_00075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DYE50_00080 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DYE50_00080 PF01297 Zinc-uptake complex component A periplasmic DYE50_00085 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYE50_00085 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYE50_00095 PF01070 FMN-dependent dehydrogenase DYE50_00105 PF04205 FMN-binding domain DYE50_00105 PF12801 4Fe-4S binding domain DYE50_00110 PF08534 Redoxin DYE50_00130 PF02233 NAD(P) transhydrogenase beta subunit DYE50_00135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DYE50_00140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DYE50_00140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DYE50_00145 PF02614 Glucuronate isomerase DYE50_00150 PF00186 Dihydrofolate reductase DYE50_00170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYE50_00185 PF14849 YidC periplasmic domain DYE50_00185 PF02096 60Kd inner membrane protein DYE50_00190 PF01809 Putative membrane protein insertion efficiency factor DYE50_00195 PF00825 Ribonuclease P DYE50_00200 PF00468 Ribosomal protein L34 DYE50_00215 PF02463 RecF/RecN/SMC N terminal domain DYE50_00220 PF00712 DNA polymerase III beta subunit, N-terminal domain DYE50_00220 PF02767 DNA polymerase III beta subunit, central domain DYE50_00220 PF02768 DNA polymerase III beta subunit, C-terminal domain DYE50_00225 PF00308 Bacterial dnaA protein DYE50_00225 PF08299 Bacterial dnaA protein helix-turn-helix DYE50_00225 PF11638 DnaA N-terminal domain DYE50_00255 PF01751 Toprim domain DYE50_00255 PF00986 DNA gyrase B subunit, carboxyl terminus DYE50_00255 PF00204 DNA gyrase B DYE50_00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_00260 PF03989 DNA gyrase C-terminal domain, beta-propeller DYE50_00260 PF00521 DNA gyrase/topoisomerase IV, subunit A DYE50_00265 PF00392 Bacterial regulatory proteins, gntR family DYE50_00265 PF00155 Aminotransferase class I and II DYE50_00270 PF01680 SOR/SNZ family DYE50_00275 PF01174 SNO glutamine amidotransferase family DYE50_00280 PF12833 Helix-turn-helix domain DYE50_00285 PF01554 MatE DYE50_00290 PF00069 Protein kinase domain DYE50_00295 PF12833 Helix-turn-helix domain DYE50_00300 PF00465 Iron-containing alcohol dehydrogenase DYE50_00310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYE50_00310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYE50_00315 PF00360 Phytochrome region DYE50_00315 PF00990 Diguanylate cyclase, GGDEF domain DYE50_00315 PF01590 GAF domain DYE50_00315 PF00563 EAL domain DYE50_00330 PF00583 Acetyltransferase (GNAT) family DYE50_00345 PF00696 Amino acid kinase family DYE50_00345 PF00583 Acetyltransferase (GNAT) family DYE50_00350 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYE50_00355 PF02677 Epoxyqueuosine reductase QueH DYE50_00375 PF00403 Heavy-metal-associated domain DYE50_00380 PF01022 Bacterial regulatory protein, arsR family DYE50_00425 PF16326 ABC transporter C-terminal domain DYE50_00425 PF12848 ABC transporter DYE50_00425 PF00005 ABC transporter DYE50_00435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYE50_00435 PF00128 Alpha amylase, catalytic domain DYE50_00440 PF00343 Carbohydrate phosphorylase DYE50_00445 PF00990 Diguanylate cyclase, GGDEF domain DYE50_00445 PF05230 MASE2 domain DYE50_00450 PF00474 Sodium:solute symporter family DYE50_00455 PF13472 GDSL-like Lipase/Acylhydrolase family DYE50_00460 PF00709 Adenylosuccinate synthetase DYE50_00480 PF04408 Helicase associated domain (HA2) DYE50_00480 PF08482 ATP-dependent helicase C-terminal DYE50_00480 PF00270 DEAD/DEAH box helicase DYE50_00480 PF00271 Helicase conserved C-terminal domain DYE50_00485 PF02558 Ketopantoate reductase PanE/ApbA DYE50_00485 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYE50_00515 PF16868 NMT1-like family DYE50_00525 PF00183 Hsp90 protein DYE50_00545 PF00085 Thioredoxin DYE50_00555 PF02540 NAD synthase DYE50_00560 PF03881 Fructosamine kinase DYE50_00565 PF03707 Bacterial signalling protein N terminal repeat DYE50_00565 PF00990 Diguanylate cyclase, GGDEF domain DYE50_00565 PF00563 EAL domain DYE50_00570 PF00990 Diguanylate cyclase, GGDEF domain DYE50_00570 PF17158 Membrane-associated sensor, integral membrane domain DYE50_00575 PF00005 ABC transporter DYE50_00575 PF12848 ABC transporter DYE50_00585 PF03949 Malic enzyme, NAD binding domain DYE50_00585 PF00390 Malic enzyme, N-terminal domain DYE50_00590 PF00491 Arginase family DYE50_00605 PF10609 NUBPL iron-transfer P-loop NTPase DYE50_00610 PF01207 Dihydrouridine synthase (Dus) DYE50_00625 PF01580 FtsK/SpoIIIE family DYE50_00625 PF09397 Ftsk gamma domain DYE50_00625 PF17854 FtsK alpha domain DYE50_00630 PF05690 Thiazole biosynthesis protein ThiG DYE50_00645 PF01343 Peptidase family S49 DYE50_00680 PF13276 HTH-like domain DYE50_00680 PF00665 Integrase core domain DYE50_00680 PF13333 Integrase core domain DYE50_00695 PF02772 S-adenosylmethionine synthetase, central domain DYE50_00695 PF00438 S-adenosylmethionine synthetase, N-terminal domain DYE50_00695 PF02773 S-adenosylmethionine synthetase, C-terminal domain DYE50_00700 PF00730 HhH-GPD superfamily base excision DNA repair protein DYE50_00700 PF10576 Iron-sulfur binding domain of endonuclease III DYE50_00700 PF00633 Helix-hairpin-helix motif DYE50_00705 PF00924 Mechanosensitive ion channel DYE50_00710 PF01554 MatE DYE50_00730 PF01256 Carbohydrate kinase DYE50_00730 PF03853 YjeF-related protein N-terminus DYE50_00735 PF01479 S4 domain DYE50_00735 PF00849 RNA pseudouridylate synthase DYE50_00740 PF00672 HAMP domain DYE50_00740 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_00765 PF00877 NlpC/P60 family DYE50_00765 PF01476 LysM domain DYE50_00770 PF08125 Mannitol dehydrogenase C-terminal domain DYE50_00770 PF01232 Mannitol dehydrogenase Rossmann domain DYE50_00775 PF00356 Bacterial regulatory proteins, lacI family DYE50_00780 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_00785 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_00790 PF13416 Bacterial extracellular solute-binding protein DYE50_00800 PF00588 SpoU rRNA Methylase family DYE50_00800 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYE50_00820 PF00294 pfkB family carbohydrate kinase DYE50_00825 PF00356 Bacterial regulatory proteins, lacI family DYE50_00840 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_00845 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_00850 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_00860 PF08244 Glycosyl hydrolases family 32 C terminal DYE50_00860 PF00251 Glycosyl hydrolases family 32 N-terminal domain DYE50_00865 PF03129 Anticodon binding domain DYE50_00865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_00865 PF04073 Aminoacyl-tRNA editing domain DYE50_00880 PF00365 Phosphofructokinase DYE50_00900 PF02909 Tetracyclin repressor-like, C-terminal domain DYE50_00900 PF00440 Bacterial regulatory proteins, tetR family DYE50_00910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYE50_00915 PF00873 AcrB/AcrD/AcrF family DYE50_00930 PF01207 Dihydrouridine synthase (Dus) DYE50_00935 PF01026 TatD related DNase DYE50_00940 PF04225 Opacity-associated protein A LysM-like domain DYE50_00940 PF01551 Peptidase family M23 DYE50_00955 PF04468 PSP1 C-terminal conserved region DYE50_00970 PF00990 Diguanylate cyclase, GGDEF domain DYE50_00970 PF01590 GAF domain DYE50_00970 PF00360 Phytochrome region DYE50_00970 PF00563 EAL domain DYE50_00990 PF01409 tRNA synthetases class II core domain (F) DYE50_01005 PF00919 Uncharacterized protein family UPF0004 DYE50_01005 PF04055 Radical SAM superfamily DYE50_01005 PF01938 TRAM domain DYE50_01020 PF01850 PIN domain DYE50_01025 PF02310 B12 binding domain DYE50_01025 PF02574 Homocysteine S-methyltransferase DYE50_01025 PF00809 Pterin binding enzyme DYE50_01025 PF02607 B12 binding domain DYE50_01025 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYE50_01030 PF00391 PEP-utilising enzyme, mobile domain DYE50_01030 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DYE50_01030 PF02896 PEP-utilising enzyme, TIM barrel domain DYE50_01035 PF02219 Methylenetetrahydrofolate reductase DYE50_01045 PF00294 pfkB family carbohydrate kinase DYE50_01050 PF01047 MarR family DYE50_01055 PF16916 Dimerisation domain of Zinc Transporter DYE50_01055 PF01545 Cation efflux family DYE50_01060 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_01065 PF00255 Glutathione peroxidase DYE50_01075 PF05191 Adenylate kinase, active site lid DYE50_01080 PF16193 AAA C-terminal domain DYE50_01080 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_01080 PF12002 MgsA AAA+ ATPase C terminal DYE50_01095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYE50_01095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYE50_01100 PF02649 Type I GTP cyclohydrolase folE2 DYE50_01105 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_01115 PF08245 Mur ligase middle domain DYE50_01115 PF02875 Mur ligase family, glutamate ligase domain DYE50_01120 PF07478 D-ala D-ala ligase C-terminus DYE50_01120 PF01820 D-ala D-ala ligase N-terminus DYE50_01130 PF08029 HisG, C-terminal domain DYE50_01130 PF01634 ATP phosphoribosyltransferase DYE50_01135 PF00475 Imidazoleglycerol-phosphate dehydratase DYE50_01140 PF02743 Cache domain DYE50_01140 PF00672 HAMP domain DYE50_01140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_01185 PF01037 Lrp/AsnC ligand binding domain DYE50_01190 PF00155 Aminotransferase class I and II DYE50_01465 PF13597 Anaerobic ribonucleoside-triphosphate reductase DYE50_01465 PF03477 ATP cone domain DYE50_01470 PF00221 Aromatic amino acid lyase DYE50_01480 PF04962 KduI/IolB family DYE50_01485 PF01235 Sodium:alanine symporter family DYE50_01490 PF00815 Histidinol dehydrogenase DYE50_01495 PF01327 Polypeptide deformylase DYE50_01500 PF00551 Formyl transferase DYE50_01500 PF02911 Formyl transferase, C-terminal domain DYE50_01505 PF03793 PASTA domain DYE50_01510 PF02690 Na+/Pi-cotransporter DYE50_01515 PF02743 Cache domain DYE50_01515 PF00672 HAMP domain DYE50_01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_01525 PF00860 Permease family DYE50_01530 PF05175 Methyltransferase small domain DYE50_01540 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DYE50_01540 PF00293 NUDIX domain DYE50_01540 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_01565 PF00145 C-5 cytosine-specific DNA methylase DYE50_01570 PF07728 AAA domain (dynein-related subfamily) DYE50_01595 PF03462 PCRF domain DYE50_01595 PF00472 RF-1 domain DYE50_01600 PF01661 Macro domain DYE50_01605 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DYE50_01605 PF17191 RecG wedge domain DYE50_01605 PF00270 DEAD/DEAH box helicase DYE50_01640 PF03462 PCRF domain DYE50_01640 PF00472 RF-1 domain DYE50_01660 PF17191 RecG wedge domain DYE50_01660 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DYE50_01660 PF00270 DEAD/DEAH box helicase DYE50_01730 PF04542 Sigma-70 region 2 DYE50_01730 PF00140 Sigma-70 factor, region 1.2 DYE50_01730 PF04545 Sigma-70, region 4 DYE50_01730 PF04539 Sigma-70 region 3 DYE50_01790 PF03979 Sigma-70 factor, region 1.1 DYE50_01790 PF00140 Sigma-70 factor, region 1.2 DYE50_01790 PF04539 Sigma-70 region 3 DYE50_01790 PF04542 Sigma-70 region 2 DYE50_01790 PF04545 Sigma-70, region 4 DYE50_01880 PF01202 Shikimate kinase DYE50_01910 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYE50_01910 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYE50_01910 PF10371 Domain of unknown function DYE50_01910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_01910 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYE50_01920 PF01381 Helix-turn-helix DYE50_01950 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system DYE50_01960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYE50_01960 PF00056 lactate/malate dehydrogenase, NAD binding domain DYE50_01975 PF07836 DmpG-like communication domain DYE50_01975 PF00682 HMGL-like DYE50_01985 PF02743 Cache domain DYE50_01985 PF00672 HAMP domain DYE50_01985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_01990 PF00300 Histidine phosphatase superfamily (branch 1) DYE50_01995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYE50_02005 PF00293 NUDIX domain DYE50_02020 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_02030 PF13229 Right handed beta helix region DYE50_02040 PF16491 CAAX prenyl protease N-terminal, five membrane helices DYE50_02040 PF01435 Peptidase family M48 DYE50_02070 PF00563 EAL domain DYE50_02070 PF00990 Diguanylate cyclase, GGDEF domain DYE50_02070 PF03707 Bacterial signalling protein N terminal repeat DYE50_02075 PF09084 NMT1/THI5 like DYE50_02090 PF04055 Radical SAM superfamily DYE50_02090 PF02310 B12 binding domain DYE50_02105 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_02105 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_02120 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_02120 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_02130 PF07055 Enoyl reductase FAD binding domain DYE50_02130 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DYE50_02130 PF12241 Trans-2-enoyl-CoA reductase catalytic region DYE50_02135 PF01180 Dihydroorotate dehydrogenase DYE50_02140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYE50_02150 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_02155 PF01063 Amino-transferase class IV DYE50_02160 PF02654 Cobalamin-5-phosphate synthase DYE50_02170 PF03061 Thioesterase superfamily DYE50_02175 PF00990 Diguanylate cyclase, GGDEF domain DYE50_02175 PF00072 Response regulator receiver domain DYE50_02190 PF00258 Flavodoxin DYE50_02190 PF00753 Metallo-beta-lactamase superfamily DYE50_02200 PF02386 Cation transport protein DYE50_02205 PF02254 TrkA-N domain DYE50_02205 PF02080 TrkA-C domain DYE50_02210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYE50_02215 PF00457 Glycosyl hydrolases family 11 DYE50_02215 PF01522 Polysaccharide deacetylase DYE50_02215 PF03422 Carbohydrate binding module (family 6) DYE50_02220 PF00072 Response regulator receiver domain DYE50_02230 PF00072 Response regulator receiver domain DYE50_02230 PF00486 Transcriptional regulatory protein, C terminal DYE50_02235 PF00512 His Kinase A (phospho-acceptor) domain DYE50_02235 PF00672 HAMP domain DYE50_02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_02240 PF00011 Hsp20/alpha crystallin family DYE50_02250 PF00456 Transketolase, thiamine diphosphate binding domain DYE50_02250 PF02779 Transketolase, pyrimidine binding domain DYE50_02255 PF01790 Prolipoprotein diacylglyceryl transferase DYE50_02260 PF10609 NUBPL iron-transfer P-loop NTPase DYE50_02265 PF03572 Peptidase family S41 DYE50_02265 PF00595 PDZ domain DYE50_02280 PF00158 Sigma-54 interaction domain DYE50_02280 PF02954 Bacterial regulatory protein, Fis family DYE50_02280 PF13185 GAF domain DYE50_02285 PF00588 SpoU rRNA Methylase family DYE50_02305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYE50_02310 PF13802 Galactose mutarotase-like DYE50_02310 PF16338 Domain of unknown function (DUF4968) DYE50_02310 PF01055 Glycosyl hydrolases family 31 DYE50_02310 PF17137 Domain of unknown function (DUF5110) DYE50_02315 PF07687 Peptidase dimerisation domain DYE50_02315 PF01546 Peptidase family M20/M25/M40 DYE50_02320 PF00999 Sodium/hydrogen exchanger family DYE50_02325 PF08402 TOBE domain DYE50_02325 PF00005 ABC transporter DYE50_02345 PF07650 KH domain DYE50_02345 PF01926 50S ribosome-binding GTPase DYE50_02350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DYE50_02355 PF01488 Shikimate / quinate 5-dehydrogenase DYE50_02355 PF08501 Shikimate dehydrogenase substrate binding domain DYE50_02360 PF04715 Anthranilate synthase component I, N terminal region DYE50_02360 PF00425 chorismate binding enzyme DYE50_02365 PF00591 Glycosyl transferase family, a/b domain DYE50_02365 PF02885 Glycosyl transferase family, helical bundle domain DYE50_02365 PF00117 Glutamine amidotransferase class-I DYE50_02370 PF00128 Alpha amylase, catalytic domain DYE50_02375 PF00218 Indole-3-glycerol phosphate synthase DYE50_02380 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_02385 PF00290 Tryptophan synthase alpha chain DYE50_02395 PF00672 HAMP domain DYE50_02395 PF02743 Cache domain DYE50_02395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_02400 PF18073 Rubredoxin metal binding domain DYE50_02400 PF06745 KaiC DYE50_02405 PF00132 Bacterial transferase hexapeptide (six repeats) DYE50_02415 PF00471 Ribosomal protein L33 DYE50_02425 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DYE50_02430 PF00467 KOW motif DYE50_02430 PF02357 Transcription termination factor nusG DYE50_02435 PF00298 Ribosomal protein L11, RNA binding domain DYE50_02435 PF03946 Ribosomal protein L11, N-terminal domain DYE50_02440 PF00687 Ribosomal protein L1p/L10e family DYE50_02445 PF00466 Ribosomal protein L10 DYE50_02450 PF00542 Ribosomal protein L7/L12 C-terminal domain DYE50_02450 PF16320 Ribosomal protein L7/L12 dimerisation domain DYE50_02455 PF10385 RNA polymerase beta subunit external 1 domain DYE50_02455 PF04565 RNA polymerase Rpb2, domain 3 DYE50_02455 PF04561 RNA polymerase Rpb2, domain 2 DYE50_02455 PF04563 RNA polymerase beta subunit DYE50_02455 PF00562 RNA polymerase Rpb2, domain 6 DYE50_02455 PF04560 RNA polymerase Rpb2, domain 7 DYE50_02460 PF04997 RNA polymerase Rpb1, domain 1 DYE50_02460 PF04983 RNA polymerase Rpb1, domain 3 DYE50_02460 PF05000 RNA polymerase Rpb1, domain 4 DYE50_02460 PF04998 RNA polymerase Rpb1, domain 5 DYE50_02460 PF00623 RNA polymerase Rpb1, domain 2 DYE50_02465 PF00164 Ribosomal protein S12/S23 DYE50_02470 PF00177 Ribosomal protein S7p/S5e DYE50_02475 PF03144 Elongation factor Tu domain 2 DYE50_02475 PF00009 Elongation factor Tu GTP binding domain DYE50_02475 PF03143 Elongation factor Tu C-terminal domain DYE50_02480 PF00338 Ribosomal protein S10p/S20e DYE50_02485 PF00297 Ribosomal protein L3 DYE50_02490 PF00573 Ribosomal protein L4/L1 family DYE50_02495 PF00276 Ribosomal protein L23 DYE50_02500 PF03947 Ribosomal Proteins L2, C-terminal domain DYE50_02500 PF00181 Ribosomal Proteins L2, RNA binding domain DYE50_02505 PF00203 Ribosomal protein S19 DYE50_02510 PF00237 Ribosomal protein L22p/L17e DYE50_02515 PF00189 Ribosomal protein S3, C-terminal domain DYE50_02515 PF07650 KH domain DYE50_02520 PF00252 Ribosomal protein L16p/L10e DYE50_02525 PF00831 Ribosomal L29 protein DYE50_02530 PF00366 Ribosomal protein S17 DYE50_02535 PF00238 Ribosomal protein L14p/L23e DYE50_02540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DYE50_02540 PF00467 KOW motif DYE50_02545 PF00673 ribosomal L5P family C-terminus DYE50_02545 PF00281 Ribosomal protein L5 DYE50_02550 PF00253 Ribosomal protein S14p/S29e DYE50_02555 PF00410 Ribosomal protein S8 DYE50_02560 PF00347 Ribosomal protein L6 DYE50_02565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DYE50_02570 PF03719 Ribosomal protein S5, C-terminal domain DYE50_02570 PF00333 Ribosomal protein S5, N-terminal domain DYE50_02575 PF00327 Ribosomal protein L30p/L7e DYE50_02580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DYE50_02585 PF00344 SecY translocase DYE50_02590 PF00444 Ribosomal protein L36 DYE50_02595 PF00416 Ribosomal protein S13/S18 DYE50_02600 PF00411 Ribosomal protein S11 DYE50_02605 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYE50_02605 PF01000 RNA polymerase Rpb3/RpoA insert domain DYE50_02605 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYE50_02610 PF01196 Ribosomal protein L17 DYE50_02620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_02620 PF02743 Cache domain DYE50_02620 PF00672 HAMP domain DYE50_02625 PF01053 Cys/Met metabolism PLP-dependent enzyme DYE50_02630 PF00196 Bacterial regulatory proteins, luxR family DYE50_02630 PF00072 Response regulator receiver domain DYE50_02675 PF00665 Integrase core domain DYE50_02675 PF13276 HTH-like domain DYE50_02675 PF13333 Integrase core domain DYE50_02775 PF10396 GTP-binding protein TrmE N-terminus DYE50_02775 PF01926 50S ribosome-binding GTPase DYE50_02775 PF12631 MnmE helical domain DYE50_02785 PF01966 HD domain DYE50_02790 PF01380 SIS domain DYE50_02795 PF00657 GDSL-like Lipase/Acylhydrolase DYE50_02805 PF04306 Protein of unknown function (DUF456) DYE50_02815 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYE50_02825 PF08402 TOBE domain DYE50_02825 PF00005 ABC transporter DYE50_02830 PF02653 Branched-chain amino acid transport system / permease component DYE50_02835 PF00672 HAMP domain DYE50_02835 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_02845 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DYE50_02845 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DYE50_02860 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_02860 PF00672 HAMP domain DYE50_02870 PF01740 STAS domain DYE50_02875 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_02880 PF06971 Putative DNA-binding protein N-terminus DYE50_02880 PF02629 CoA binding domain DYE50_02885 PF01921 tRNA synthetases class I (K) DYE50_02890 PF00209 Sodium:neurotransmitter symporter family DYE50_02940 PF02261 Aspartate decarboxylase DYE50_02945 PF03309 Type III pantothenate kinase DYE50_02955 PF04127 DNA / pantothenate metabolism flavoprotein DYE50_02955 PF02441 Flavoprotein DYE50_02960 PF02569 Pantoate-beta-alanine ligase DYE50_02965 PF02548 Ketopantoate hydroxymethyltransferase DYE50_02975 PF17200 Single Cache domain 2 DYE50_02975 PF07730 Histidine kinase DYE50_02980 PF00072 Response regulator receiver domain DYE50_02980 PF00196 Bacterial regulatory proteins, luxR family DYE50_02985 PF00871 Acetokinase family DYE50_02995 PF01965 DJ-1/PfpI family DYE50_03000 PF00486 Transcriptional regulatory protein, C terminal DYE50_03000 PF00072 Response regulator receiver domain DYE50_03005 PF00072 Response regulator receiver domain DYE50_03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_03005 PF00672 HAMP domain DYE50_03005 PF00512 His Kinase A (phospho-acceptor) domain DYE50_03005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYE50_03005 PF01627 Hpt domain DYE50_03015 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYE50_03020 PF01176 Translation initiation factor 1A / IF-1 DYE50_03025 PF01556 DnaJ C terminal domain DYE50_03025 PF00226 DnaJ domain DYE50_03060 PF01882 Protein of unknown function DUF58 DYE50_03065 PF07726 ATPase family associated with various cellular activities (AAA) DYE50_03065 PF17863 AAA lid domain DYE50_03085 PF03600 Citrate transporter DYE50_03095 PF01554 MatE DYE50_03100 PF01926 50S ribosome-binding GTPase DYE50_03100 PF06071 Protein of unknown function (DUF933) DYE50_03110 PF03764 Elongation factor G, domain IV DYE50_03110 PF14492 Elongation Factor G, domain II DYE50_03110 PF03144 Elongation factor Tu domain 2 DYE50_03110 PF00009 Elongation factor Tu GTP binding domain DYE50_03110 PF00679 Elongation factor G C-terminus DYE50_03125 PF01121 Dephospho-CoA kinase DYE50_03130 PF01612 3'-5' exonuclease DYE50_03130 PF00476 DNA polymerase family A DYE50_03130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYE50_03130 PF01367 5'-3' exonuclease, C-terminal SAM fold DYE50_03165 PF00266 Aminotransferase class-V DYE50_03170 PF16199 Radical_SAM C-terminal domain DYE50_03170 PF04055 Radical SAM superfamily DYE50_03175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYE50_03180 PF01043 SecA preprotein cross-linking domain DYE50_03180 PF07516 SecA Wing and Scaffold domain DYE50_03180 PF07517 SecA DEAD-like domain DYE50_03180 PF02810 SEC-C motif DYE50_03195 PF00849 RNA pseudouridylate synthase DYE50_03195 PF01479 S4 domain DYE50_03210 PF03707 Bacterial signalling protein N terminal repeat DYE50_03210 PF00990 Diguanylate cyclase, GGDEF domain DYE50_03210 PF00563 EAL domain DYE50_03215 PF02719 Polysaccharide biosynthesis protein DYE50_03220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYE50_03230 PF00111 2Fe-2S iron-sulfur cluster binding domain DYE50_03230 PF01799 [2Fe-2S] binding domain DYE50_03240 PF02547 Queuosine biosynthesis protein DYE50_03245 PF17200 Single Cache domain 2 DYE50_03245 PF00672 HAMP domain DYE50_03245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_03250 PF17864 RuvB AAA lid domain DYE50_03250 PF05491 RuvB C-terminal winged helix domain DYE50_03250 PF05496 Holliday junction DNA helicase RuvB P-loop domain DYE50_03255 PF01330 RuvA N terminal domain DYE50_03270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYE50_03275 PF00381 PTS HPr component phosphorylation site DYE50_03275 PF02896 PEP-utilising enzyme, TIM barrel domain DYE50_03275 PF00391 PEP-utilising enzyme, mobile domain DYE50_03275 PF05524 PEP-utilising enzyme, N-terminal DYE50_03275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYE50_03295 PF01554 MatE DYE50_03315 PF00990 Diguanylate cyclase, GGDEF domain DYE50_03315 PF00563 EAL domain DYE50_03315 PF03707 Bacterial signalling protein N terminal repeat DYE50_03320 PF16258 Domain of unknown function (DUF4912) DYE50_03330 PF03687 Uncharacterised protein family (UPF0164) DYE50_03355 PF02381 MraZ protein, putative antitoxin-like DYE50_03360 PF01795 MraW methylase family DYE50_03370 PF02875 Mur ligase family, glutamate ligase domain DYE50_03370 PF08245 Mur ligase middle domain DYE50_03370 PF01225 Mur ligase family, catalytic domain DYE50_03375 PF01098 Cell cycle protein DYE50_03380 PF03799 Cell division protein FtsQ DYE50_03380 PF08478 POTRA domain, FtsQ-type DYE50_03385 PF02491 SHS2 domain inserted in FTSA DYE50_03390 PF00091 Tubulin/FtsZ family, GTPase domain DYE50_03390 PF12327 FtsZ family, C-terminal domain DYE50_03395 PF00589 Phage integrase family DYE50_03395 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_03405 PF02481 DNA recombination-mediator protein A DYE50_03410 PF01396 Topoisomerase DNA binding C4 zinc finger DYE50_03410 PF01131 DNA topoisomerase DYE50_03410 PF01751 Toprim domain DYE50_03415 PF00589 Phage integrase family DYE50_03415 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_03420 PF02743 Cache domain DYE50_03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_03420 PF00672 HAMP domain DYE50_03425 PF00227 Proteasome subunit DYE50_03430 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_03430 PF07724 AAA domain (Cdc48 subfamily) DYE50_03440 PF00990 Diguanylate cyclase, GGDEF domain DYE50_03440 PF08448 PAS fold DYE50_03450 PF00920 Dehydratase family DYE50_03455 PF00990 Diguanylate cyclase, GGDEF domain DYE50_03455 PF08448 PAS fold DYE50_03460 PF02142 MGS-like domain DYE50_03460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYE50_03460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYE50_03470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_03470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYE50_03470 PF00205 Thiamine pyrophosphate enzyme, central domain DYE50_03475 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_03475 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYE50_03480 PF07075 Protein of unknown function (DUF1343) DYE50_03495 PF01116 Fructose-bisphosphate aldolase class-II DYE50_03510 PF14841 FliG middle domain DYE50_03510 PF14842 FliG N-terminal domain DYE50_03510 PF01706 FliG C-terminal domain DYE50_03515 PF05193 Peptidase M16 inactive domain DYE50_03515 PF00675 Insulinase (Peptidase family M16) DYE50_03515 PF08367 Peptidase M16C associated DYE50_03530 PF02576 RimP N-terminal domain DYE50_03530 PF17384 RimP C-terminal SH3 domain DYE50_03535 PF13184 NusA-like KH domain DYE50_03535 PF00575 S1 RNA binding domain DYE50_03535 PF08529 NusA N-terminal domain DYE50_03540 PF11987 Translation-initiation factor 2 DYE50_03540 PF04760 Translation initiation factor IF-2, N-terminal region DYE50_03540 PF00009 Elongation factor Tu GTP binding domain DYE50_03545 PF02033 Ribosome-binding factor A DYE50_03550 PF12437 Glutamine synthetase type III N terminal DYE50_03550 PF00120 Glutamine synthetase, catalytic domain DYE50_03550 PF18318 Glutamine synthetase C-terminal domain DYE50_03560 PF00733 Asparagine synthase DYE50_03560 PF13537 Glutamine amidotransferase domain DYE50_03565 PF00117 Glutamine amidotransferase class-I DYE50_03565 PF06418 CTP synthase N-terminus DYE50_03570 PF00117 Glutamine amidotransferase class-I DYE50_03570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DYE50_03585 PF01554 MatE DYE50_03590 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_03600 PF00150 Cellulase (glycosyl hydrolase family 5) DYE50_03605 PF02142 MGS-like domain DYE50_03605 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYE50_03605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYE50_03610 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYE50_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_03615 PF01493 GXGXG motif DYE50_03615 PF00310 Glutamine amidotransferases class-II DYE50_03615 PF01645 Conserved region in glutamate synthase DYE50_03615 PF04898 Glutamate synthase central domain DYE50_03650 PF00909 Ammonium Transporter Family DYE50_03655 PF01509 TruB family pseudouridylate synthase (N terminal domain) DYE50_03660 PF00312 Ribosomal protein S15 DYE50_03665 PF00013 KH domain DYE50_03665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DYE50_03665 PF01138 3' exoribonuclease family, domain 1 DYE50_03665 PF03725 3' exoribonuclease family, domain 2 DYE50_03665 PF00575 S1 RNA binding domain DYE50_03670 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DYE50_03670 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DYE50_03675 PF01263 Aldose 1-epimerase DYE50_03680 PF00288 GHMP kinases N terminal domain DYE50_03680 PF08544 GHMP kinases C terminal DYE50_03680 PF10509 Galactokinase galactose-binding signature DYE50_03685 PF00356 Bacterial regulatory proteins, lacI family DYE50_03695 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_03700 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_03705 PF01301 Glycosyl hydrolases family 35 DYE50_03710 PF00692 dUTPase DYE50_03730 PF01702 Queuine tRNA-ribosyltransferase DYE50_03750 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_03750 PF00672 HAMP domain DYE50_03755 PF00271 Helicase conserved C-terminal domain DYE50_03755 PF00270 DEAD/DEAH box helicase DYE50_03755 PF04408 Helicase associated domain (HA2) DYE50_03755 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DYE50_03805 PF03747 ADP-ribosylglycohydrolase DYE50_03840 PF03102 NeuB family DYE50_03840 PF08666 SAF domain DYE50_03855 PF01709 Transcriptional regulator DYE50_03860 PF02075 Crossover junction endodeoxyribonuclease RuvC DYE50_03870 PF00722 Glycosyl hydrolases family 16 DYE50_03880 PF02127 Aminopeptidase I zinc metalloprotease (M18) DYE50_03885 PF06689 ClpX C4-type zinc finger DYE50_03885 PF07724 AAA domain (Cdc48 subfamily) DYE50_03885 PF10431 C-terminal, D2-small domain, of ClpB protein DYE50_03890 PF00574 Clp protease DYE50_03895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYE50_03895 PF05698 Bacterial trigger factor protein (TF) C-terminus DYE50_03895 PF05697 Bacterial trigger factor protein (TF) DYE50_03930 PF02535 ZIP Zinc transporter DYE50_03935 PF00258 Flavodoxin DYE50_03945 PF00990 Diguanylate cyclase, GGDEF domain DYE50_03945 PF08448 PAS fold DYE50_03950 PF00440 Bacterial regulatory proteins, tetR family DYE50_03950 PF08361 MAATS-type transcriptional repressor, C-terminal region DYE50_03955 PF03176 MMPL family DYE50_03970 PF00664 ABC transporter transmembrane region DYE50_03970 PF00005 ABC transporter DYE50_03975 PF04954 Siderophore-interacting protein DYE50_03975 PF08021 Siderophore-interacting FAD-binding domain DYE50_03975 PF00664 ABC transporter transmembrane region DYE50_03975 PF00005 ABC transporter DYE50_04000 PF00440 Bacterial regulatory proteins, tetR family DYE50_04020 PF00113 Enolase, C-terminal TIM barrel domain DYE50_04020 PF03952 Enolase, N-terminal domain DYE50_04030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_04030 PF07196 Flagellin hook IN motif DYE50_04035 PF00669 Bacterial flagellin N-terminal helical region DYE50_04035 PF00700 Bacterial flagellin C-terminal helical region DYE50_04040 PF02623 FliW protein DYE50_04045 PF02599 Global regulator protein family DYE50_04050 PF00814 Glycoprotease family DYE50_04055 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DYE50_04075 PF07195 Flagellar hook-associated protein 2 C-terminus DYE50_04075 PF02465 Flagellar hook-associated protein 2 N-terminus DYE50_04085 PF00700 Bacterial flagellin C-terminal helical region DYE50_04085 PF00669 Bacterial flagellin N-terminal helical region DYE50_04090 PF00700 Bacterial flagellin C-terminal helical region DYE50_04090 PF00669 Bacterial flagellin N-terminal helical region DYE50_04095 PF01725 Ham1 family DYE50_04120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYE50_04120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYE50_04130 PF01546 Peptidase family M20/M25/M40 DYE50_04130 PF07687 Peptidase dimerisation domain DYE50_04135 PF00005 ABC transporter DYE50_04135 PF09383 NIL domain DYE50_04140 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_04145 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYE50_04145 PF00056 lactate/malate dehydrogenase, NAD binding domain DYE50_04150 PF18766 SWI2/SNF2 ATPase DYE50_04150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYE50_04150 PF11867 Domain of unknown function (DUF3387) DYE50_04160 PF07693 KAP family P-loop domain DYE50_04170 PF01420 Type I restriction modification DNA specificity domain DYE50_04175 PF02384 N-6 DNA Methylase DYE50_04180 PF03180 NLPA lipoprotein DYE50_04185 PF01625 Peptide methionine sulfoxide reductase DYE50_04190 PF03180 NLPA lipoprotein DYE50_04195 PF02913 FAD linked oxidases, C-terminal domain DYE50_04195 PF01565 FAD binding domain DYE50_04200 PF00155 Aminotransferase class I and II DYE50_04215 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_04220 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_04225 PF00005 ABC transporter DYE50_04230 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_04235 PF00005 ABC transporter DYE50_04245 PF03477 ATP cone domain DYE50_04255 PF00005 ABC transporter DYE50_04260 PF02632 BioY family DYE50_04265 PF00795 Carbon-nitrogen hydrolase DYE50_04270 PF10509 Galactokinase galactose-binding signature DYE50_04270 PF08544 GHMP kinases C terminal DYE50_04275 PF01975 Survival protein SurE DYE50_04300 PF13476 AAA domain DYE50_04305 PF00375 Sodium:dicarboxylate symporter family DYE50_04315 PF06165 Glycosyltransferase family 36 DYE50_04315 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DYE50_04320 PF07745 Glycosyl hydrolase family 53 DYE50_04330 PF01476 LysM domain DYE50_04330 PF01551 Peptidase family M23 DYE50_04330 PF08525 Opacity-associated protein A N-terminal motif DYE50_04340 PF01061 ABC-2 type transporter DYE50_04340 PF00005 ABC transporter DYE50_04340 PF00498 FHA domain DYE50_04350 PF00069 Protein kinase domain DYE50_04350 PF03793 PASTA domain DYE50_04355 PF01171 PP-loop family DYE50_04360 PF05362 Lon protease (S16) C-terminal proteolytic domain DYE50_04360 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_04360 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYE50_04365 PF17785 PUA-like domain DYE50_04365 PF10672 S-adenosylmethionine-dependent methyltransferase DYE50_04380 PF01026 TatD related DNase DYE50_04385 PF00156 Phosphoribosyl transferase domain DYE50_04395 PF05681 Fumarate hydratase (Fumerase) DYE50_04395 PF05683 Fumarase C-terminus DYE50_04405 PF01351 Ribonuclease HII DYE50_04415 PF00266 Aminotransferase class-V DYE50_04420 PF13186 Iron-sulfur cluster-binding domain DYE50_04440 PF01520 N-acetylmuramoyl-L-alanine amidase DYE50_04450 PF04620 Flagellar filament outer layer protein Flaa DYE50_04460 PF13307 Helicase C-terminal domain DYE50_04460 PF06733 DEAD_2 DYE50_04475 PF00953 Glycosyl transferase family 4 DYE50_04480 PF02875 Mur ligase family, glutamate ligase domain DYE50_04480 PF01225 Mur ligase family, catalytic domain DYE50_04480 PF08245 Mur ligase middle domain DYE50_04490 PF03033 Glycosyltransferase family 28 N-terminal domain DYE50_04490 PF04101 Glycosyltransferase family 28 C-terminal domain DYE50_04500 PF12169 DNA polymerase III subunits gamma and tau domain III DYE50_04505 PF00989 PAS fold DYE50_04505 PF00512 His Kinase A (phospho-acceptor) domain DYE50_04505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_04510 PF02954 Bacterial regulatory protein, Fis family DYE50_04510 PF00072 Response regulator receiver domain DYE50_04510 PF00158 Sigma-54 interaction domain DYE50_04520 PF01649 Ribosomal protein S20 DYE50_04525 PF00216 Bacterial DNA-binding protein DYE50_04530 PF00795 Carbon-nitrogen hydrolase DYE50_04540 PF07497 Rho termination factor, RNA-binding domain DYE50_04540 PF07498 Rho termination factor, N-terminal domain DYE50_04540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_04550 PF04551 GcpE protein DYE50_04560 PF02397 Bacterial sugar transferase DYE50_04565 PF13439 Glycosyltransferase Family 4 DYE50_04565 PF00534 Glycosyl transferases group 1 DYE50_04570 PF13439 Glycosyltransferase Family 4 DYE50_04570 PF00534 Glycosyl transferases group 1 DYE50_04580 PF00266 Aminotransferase class-V DYE50_04585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_04585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYE50_04600 PF02096 60Kd inner membrane protein DYE50_04605 PF14849 YidC periplasmic domain DYE50_04605 PF02096 60Kd inner membrane protein DYE50_04610 PF01467 Cytidylyltransferase-like DYE50_04615 PF00266 Aminotransferase class-V DYE50_04625 PF02096 60Kd inner membrane protein DYE50_04625 PF14849 YidC periplasmic domain DYE50_04630 PF02096 60Kd inner membrane protein DYE50_04640 PF03062 MBOAT, membrane-bound O-acyltransferase family DYE50_04645 PF00550 Phosphopantetheine attachment site DYE50_04650 PF13193 AMP-binding enzyme C-terminal domain DYE50_04650 PF00501 AMP-binding enzyme DYE50_04660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYE50_04660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYE50_04660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYE50_04665 PF01370 NAD dependent epimerase/dehydratase family DYE50_04690 PF02096 60Kd inner membrane protein DYE50_04695 PF00534 Glycosyl transferases group 1 DYE50_04695 PF13439 Glycosyltransferase Family 4 DYE50_04700 PF02096 60Kd inner membrane protein DYE50_04700 PF14849 YidC periplasmic domain DYE50_04710 PF00535 Glycosyl transferase family 2 DYE50_04750 PF00005 ABC transporter DYE50_04755 PF00483 Nucleotidyl transferase DYE50_04760 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DYE50_04765 PF16363 GDP-mannose 4,6 dehydratase DYE50_04770 PF04321 RmlD substrate binding domain DYE50_04785 PF00753 Metallo-beta-lactamase superfamily DYE50_04785 PF03772 Competence protein DYE50_04785 PF13567 Domain of unknown function (DUF4131) DYE50_04790 PF00398 Ribosomal RNA adenine dimethylase DYE50_04800 PF00849 RNA pseudouridylate synthase DYE50_04805 PF00849 RNA pseudouridylate synthase DYE50_04815 PF00155 Aminotransferase class I and II DYE50_04820 PF00534 Glycosyl transferases group 1 DYE50_04820 PF08323 Starch synthase catalytic domain DYE50_04825 PF01250 Ribosomal protein S6 DYE50_04830 PF00436 Single-strand binding protein family DYE50_04835 PF01084 Ribosomal protein S18 DYE50_04840 PF01281 Ribosomal protein L9, N-terminal domain DYE50_04840 PF03948 Ribosomal protein L9, C-terminal domain DYE50_04845 PF00772 DnaB-like helicase N terminal domain DYE50_04845 PF03796 DnaB-like helicase C terminal domain DYE50_04860 PF05958 tRNA (Uracil-5-)-methyltransferase DYE50_04870 PF12627 Probable RNA and SrmB- binding site of polymerase A DYE50_04870 PF12626 Polymerase A arginine-rich C-terminus DYE50_04870 PF01743 Poly A polymerase head domain DYE50_04875 PF01259 SAICAR synthetase DYE50_04885 PF01588 Putative tRNA binding domain DYE50_04885 PF09334 tRNA synthetases class I (M) DYE50_04890 PF13419 Haloacid dehalogenase-like hydrolase DYE50_04895 PF01475 Ferric uptake regulator family DYE50_04900 PF02915 Rubrerythrin DYE50_04910 PF12706 Beta-lactamase superfamily domain DYE50_04910 PF00753 Metallo-beta-lactamase superfamily DYE50_04915 PF08463 EcoEI R protein C-terminal DYE50_04915 PF04851 Type III restriction enzyme, res subunit DYE50_04915 PF00271 Helicase conserved C-terminal domain DYE50_04915 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DYE50_04920 PF02661 Fic/DOC family DYE50_04920 PF13784 Fic/DOC family N-terminal DYE50_04930 PF01420 Type I restriction modification DNA specificity domain DYE50_04930 PF01420 Type I restriction modification DNA specificity domain DYE50_04960 PF02384 N-6 DNA Methylase DYE50_04960 PF12161 HsdM N-terminal domain DYE50_04965 PF00005 ABC transporter DYE50_04985 PF00694 Aconitase C-terminal domain DYE50_04990 PF00330 Aconitase family (aconitate hydratase) DYE50_04995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYE50_04995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYE50_05005 PF04055 Radical SAM superfamily DYE50_05035 PF02163 Peptidase family M50 DYE50_05035 PF17820 PDZ domain DYE50_05040 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYE50_05040 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DYE50_05040 PF13288 DXP reductoisomerase C-terminal domain DYE50_05050 PF01255 Putative undecaprenyl diphosphate synthase DYE50_05055 PF01765 Ribosome recycling factor DYE50_05060 PF00889 Elongation factor TS DYE50_05065 PF00318 Ribosomal protein S2 DYE50_05070 PF02545 Maf-like protein DYE50_05085 PF01467 Cytidylyltransferase-like DYE50_05090 PF01783 Ribosomal L32p protein family DYE50_05095 PF00550 Phosphopantetheine attachment site DYE50_05100 PF14622 Ribonuclease-III-like DYE50_05100 PF00035 Double-stranded RNA binding motif DYE50_05105 PF01197 Ribosomal protein L31 DYE50_05110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_05110 PF02743 Cache domain DYE50_05110 PF00672 HAMP domain DYE50_05115 PF10672 S-adenosylmethionine-dependent methyltransferase DYE50_05120 PF00270 DEAD/DEAH box helicase DYE50_05120 PF00271 Helicase conserved C-terminal domain DYE50_05125 PF12848 ABC transporter DYE50_05125 PF00005 ABC transporter DYE50_05130 PF00072 Response regulator receiver domain DYE50_05130 PF01627 Hpt domain DYE50_05130 PF00512 His Kinase A (phospho-acceptor) domain DYE50_05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_05140 PF00665 Integrase core domain DYE50_05140 PF13333 Integrase core domain DYE50_05140 PF13276 HTH-like domain DYE50_05155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYE50_05195 PF01139 tRNA-splicing ligase RtcB DYE50_05215 PF10127 RNA repair pathway DNA polymerase beta family DYE50_05245 PF14841 FliG middle domain DYE50_05245 PF01706 FliG C-terminal domain DYE50_05245 PF14842 FliG N-terminal domain DYE50_05335 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_05335 PF05362 Lon protease (S16) C-terminal proteolytic domain DYE50_05335 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYE50_05370 PF00817 impB/mucB/samB family DYE50_05370 PF11799 impB/mucB/samB family C-terminal domain DYE50_05370 PF11798 IMS family HHH motif DYE50_05375 PF08450 SMP-30/Gluconolactonase/LRE-like region DYE50_05385 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYE50_05385 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_05385 PF05362 Lon protease (S16) C-terminal proteolytic domain DYE50_05405 PF03576 Peptidase family S58 DYE50_05410 PF02583 Metal-sensitive transcriptional repressor DYE50_05415 PF00403 Heavy-metal-associated domain DYE50_05435 PF00899 ThiF family DYE50_05440 PF02661 Fic/DOC family DYE50_05440 PF12728 Helix-turn-helix domain DYE50_05445 PF01555 DNA methylase DYE50_05450 PF04556 DpnII restriction endonuclease DYE50_05455 PF04556 DpnII restriction endonuclease DYE50_05460 PF02086 D12 class N6 adenine-specific DNA methyltransferase DYE50_05465 PF00672 HAMP domain DYE50_05465 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_05475 PF04237 YjbR DYE50_05490 PF01209 ubiE/COQ5 methyltransferase family DYE50_05525 PF13173 AAA domain DYE50_05525 PF13635 Domain of unknown function (DUF4143) DYE50_05535 PF01661 Macro domain DYE50_05565 PF03129 Anticodon binding domain DYE50_05565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_05565 PF04073 Aminoacyl-tRNA editing domain DYE50_05575 PF00132 Bacterial transferase hexapeptide (six repeats) DYE50_05585 PF00583 Acetyltransferase (GNAT) family DYE50_05600 PF02690 Na+/Pi-cotransporter DYE50_05605 PF01042 Endoribonuclease L-PSP DYE50_05610 PF12706 Beta-lactamase superfamily domain DYE50_05630 PF00027 Cyclic nucleotide-binding domain DYE50_05630 PF00520 Ion transport protein DYE50_05655 PF00563 EAL domain DYE50_05655 PF03707 Bacterial signalling protein N terminal repeat DYE50_05655 PF00990 Diguanylate cyclase, GGDEF domain DYE50_05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_05665 PF00512 His Kinase A (phospho-acceptor) domain DYE50_05665 PF09308 LuxQ, periplasmic DYE50_05665 PF00072 Response regulator receiver domain DYE50_05675 PF13847 Methyltransferase domain DYE50_05695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_05695 PF00672 HAMP domain DYE50_05695 PF02743 Cache domain DYE50_05715 PF12146 Serine aminopeptidase, S33 DYE50_05735 PF00294 pfkB family carbohydrate kinase DYE50_05815 PF00753 Metallo-beta-lactamase superfamily DYE50_05815 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYE50_05845 PF03807 NADP oxidoreductase coenzyme F420-dependent DYE50_05845 PF14748 Pyrroline-5-carboxylate reductase dimerisation DYE50_05850 PF01243 Pyridoxamine 5'-phosphate oxidase DYE50_05850 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DYE50_05855 PF12833 Helix-turn-helix domain DYE50_05855 PF02311 AraC-like ligand binding domain DYE50_05880 PF13280 WYL domain DYE50_05880 PF08279 HTH domain DYE50_05885 PF01965 DJ-1/PfpI family DYE50_05890 PF12833 Helix-turn-helix domain DYE50_05910 PF00005 ABC transporter DYE50_05910 PF17755 UvrA DNA-binding domain DYE50_05910 PF17760 UvrA interaction domain DYE50_05935 PF00583 Acetyltransferase (GNAT) family DYE50_05955 PF00583 Acetyltransferase (GNAT) family DYE50_05975 PF00753 Metallo-beta-lactamase superfamily DYE50_05975 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYE50_05985 PF06445 GyrI-like small molecule binding domain DYE50_05985 PF13411 MerR HTH family regulatory protein DYE50_06000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYE50_06000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYE50_06025 PF01554 MatE DYE50_06070 PF00398 Ribosomal RNA adenine dimethylase DYE50_06075 PF00583 Acetyltransferase (GNAT) family DYE50_06095 PF02567 Phenazine biosynthesis-like protein DYE50_06100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_06105 PF14602 Hexapeptide repeat of succinyl-transferase DYE50_06105 PF12464 Maltose acetyltransferase DYE50_06115 PF13673 Acetyltransferase (GNAT) domain DYE50_06115 PF13302 Acetyltransferase (GNAT) domain DYE50_06115 PF03352 Methyladenine glycosylase DYE50_06115 PF00117 Glutamine amidotransferase class-I DYE50_06115 PF00958 GMP synthase C terminal domain DYE50_06120 PF02522 Aminoglycoside 3-N-acetyltransferase DYE50_06130 PF01381 Helix-turn-helix DYE50_06145 PF13614 AAA domain DYE50_06155 PF01177 Asp/Glu/Hydantoin racemase DYE50_06175 PF11208 Protein of unknown function (DUF2992) DYE50_06200 PF05437 Branched-chain amino acid transport protein (AzlD) DYE50_06205 PF03591 AzlC protein DYE50_06220 PF13419 Haloacid dehalogenase-like hydrolase DYE50_06285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYE50_06295 PF01820 D-ala D-ala ligase N-terminus DYE50_06295 PF07478 D-ala D-ala ligase C-terminus DYE50_06305 PF01943 Polysaccharide biosynthesis protein DYE50_06315 PF00132 Bacterial transferase hexapeptide (six repeats) DYE50_06340 PF01501 Glycosyl transferase family 8 DYE50_06355 PF01050 Mannose-6-phosphate isomerase DYE50_06355 PF00483 Nucleotidyl transferase DYE50_06360 PF01238 Phosphomannose isomerase type I DYE50_06395 PF01661 Macro domain DYE50_06425 PF03747 ADP-ribosylglycohydrolase DYE50_06445 PF12102 Domain of unknown function (DUF3578) DYE50_06445 PF07728 AAA domain (dynein-related subfamily) DYE50_06460 PF13361 UvrD-like helicase C-terminal domain DYE50_06460 PF00580 UvrD/REP helicase N-terminal domain DYE50_06460 PF12705 PD-(D/E)XK nuclease superfamily DYE50_06485 PF01555 DNA methylase DYE50_06490 PF04851 Type III restriction enzyme, res subunit DYE50_06565 PF01706 FliG C-terminal domain DYE50_06565 PF14842 FliG N-terminal domain DYE50_06565 PF14841 FliG middle domain DYE50_06585 PF02384 N-6 DNA Methylase DYE50_06585 PF12161 HsdM N-terminal domain DYE50_06590 PF00817 impB/mucB/samB family DYE50_06590 PF13438 Domain of unknown function (DUF4113) DYE50_06590 PF11799 impB/mucB/samB family C-terminal domain DYE50_06615 PF13276 HTH-like domain DYE50_06615 PF00665 Integrase core domain DYE50_06615 PF13333 Integrase core domain DYE50_06625 PF01098 Cell cycle protein DYE50_06630 PF03717 Penicillin-binding Protein dimerisation domain DYE50_06630 PF00905 Penicillin binding protein transpeptidase domain DYE50_06665 PF03979 Sigma-70 factor, region 1.1 DYE50_06665 PF04542 Sigma-70 region 2 DYE50_06665 PF04545 Sigma-70, region 4 DYE50_06665 PF04539 Sigma-70 region 3 DYE50_06665 PF00140 Sigma-70 factor, region 1.2 DYE50_06670 PF01807 CHC2 zinc finger DYE50_06670 PF08275 DNA primase catalytic core, N-terminal domain DYE50_06685 PF00753 Metallo-beta-lactamase superfamily DYE50_06685 PF12706 Beta-lactamase superfamily domain DYE50_06710 PF12627 Probable RNA and SrmB- binding site of polymerase A DYE50_06710 PF01743 Poly A polymerase head domain DYE50_06710 PF13735 tRNA nucleotidyltransferase domain 2 putative DYE50_06735 PF03755 YicC-like family, N-terminal region DYE50_06735 PF08340 Domain of unknown function (DUF1732) DYE50_06740 PF00579 tRNA synthetases class I (W and Y) DYE50_06745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYE50_06750 PF08245 Mur ligase middle domain DYE50_06750 PF02875 Mur ligase family, glutamate ligase domain DYE50_06755 PF01168 Alanine racemase, N-terminal domain DYE50_06755 PF00842 Alanine racemase, C-terminal domain DYE50_06765 PF14821 Threonine synthase N terminus DYE50_06765 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_06775 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_06780 PF03461 TRCF domain DYE50_06780 PF02559 CarD-like/TRCF domain DYE50_06780 PF17757 UvrB interaction domain DYE50_06780 PF00270 DEAD/DEAH box helicase DYE50_06780 PF00271 Helicase conserved C-terminal domain DYE50_06815 PF01813 ATP synthase subunit D DYE50_06820 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_06820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_06825 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_06825 PF16886 ATPsynthase alpha/beta subunit N-term extension DYE50_06825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_06835 PF01991 ATP synthase (E/31 kDa) subunit DYE50_06855 PF00460 Flagella basal body rod protein DYE50_06855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_06895 PF10531 SLBB domain DYE50_06895 PF13375 RnfC Barrel sandwich hybrid domain DYE50_06895 PF13237 4Fe-4S dicluster domain DYE50_06895 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYE50_06920 PF00330 Aconitase family (aconitate hydratase) DYE50_06935 PF00205 Thiamine pyrophosphate enzyme, central domain DYE50_06935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_06935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYE50_06950 PF10502 Signal peptidase, peptidase S26 DYE50_06970 PF01226 Formate/nitrite transporter DYE50_06975 PF01039 Carboxyl transferase domain DYE50_07025 PF00437 Type II/IV secretion system protein DYE50_07030 PF00263 Bacterial type II and III secretion system protein DYE50_07030 PF03958 Bacterial type II/III secretion system short domain DYE50_07035 PF02601 Exonuclease VII, large subunit DYE50_07035 PF13742 OB-fold nucleic acid binding domain DYE50_07040 PF02609 Exonuclease VII small subunit DYE50_07045 PF01119 DNA mismatch repair protein, C-terminal domain DYE50_07045 PF08676 MutL C terminal dimerisation domain DYE50_07050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_07050 PF02743 Cache domain DYE50_07050 PF00672 HAMP domain DYE50_07055 PF01547 Bacterial extracellular solute-binding protein DYE50_07060 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_07060 PF00072 Response regulator receiver domain DYE50_07110 PF01740 STAS domain DYE50_07125 PF00271 Helicase conserved C-terminal domain DYE50_07125 PF00270 DEAD/DEAH box helicase DYE50_07130 PF06470 SMC proteins Flexible Hinge Domain DYE50_07130 PF02463 RecF/RecN/SMC N terminal domain DYE50_07150 PF02403 Seryl-tRNA synthetase N-terminal domain DYE50_07150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_07155 PF01594 AI-2E family transporter DYE50_07160 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_07165 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_07170 PF00209 Sodium:neurotransmitter symporter family DYE50_07180 PF01653 NAD-dependent DNA ligase adenylation domain DYE50_07180 PF00533 BRCA1 C Terminus (BRCT) domain DYE50_07180 PF03120 NAD-dependent DNA ligase OB-fold domain DYE50_07185 PF02390 Putative methyltransferase DYE50_07205 PF00817 impB/mucB/samB family DYE50_07205 PF11799 impB/mucB/samB family C-terminal domain DYE50_07205 PF11798 IMS family HHH motif DYE50_07215 PF00942 Cellulose binding domain DYE50_07215 PF00150 Cellulase (glycosyl hydrolase family 5) DYE50_07225 PF02653 Branched-chain amino acid transport system / permease component DYE50_07230 PF02653 Branched-chain amino acid transport system / permease component DYE50_07230 PF11862 Domain of unknown function (DUF3382) DYE50_07235 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYE50_07235 PF00005 ABC transporter DYE50_07240 PF00005 ABC transporter DYE50_07245 PF01479 S4 domain DYE50_07245 PF00849 RNA pseudouridylate synthase DYE50_07255 PF00460 Flagella basal body rod protein DYE50_07255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_07260 PF00498 FHA domain DYE50_07260 PF00990 Diguanylate cyclase, GGDEF domain DYE50_07260 PF00563 EAL domain DYE50_07265 PF13393 Histidyl-tRNA synthetase DYE50_07275 PF00293 NUDIX domain DYE50_07285 PF13419 Haloacid dehalogenase-like hydrolase DYE50_07290 PF17131 Outer membrane lipoprotein-sorting protein DYE50_07305 PF01022 Bacterial regulatory protein, arsR family DYE50_07320 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DYE50_07325 PF14489 QueF-like protein DYE50_07330 PF02592 Putative vitamin uptake transporter DYE50_07335 PF01835 MG2 domain DYE50_07335 PF17962 Bacterial macroglobulin domain 6 DYE50_07335 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DYE50_07335 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DYE50_07335 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DYE50_07335 PF07703 Alpha-2-macroglobulin bait region domain DYE50_07335 PF00207 Alpha-2-macroglobulin family DYE50_07340 PF17151 Periplasmic sensor domain DYE50_07340 PF00990 Diguanylate cyclase, GGDEF domain DYE50_07370 PF01047 MarR family DYE50_07375 PF00589 Phage integrase family DYE50_07380 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_07380 PF00589 Phage integrase family DYE50_07385 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_07385 PF00589 Phage integrase family DYE50_07395 PF00912 Transglycosylase DYE50_07395 PF00905 Penicillin binding protein transpeptidase domain DYE50_07395 PF17092 Penicillin-binding protein OB-like domain DYE50_07400 PF00579 tRNA synthetases class I (W and Y) DYE50_07405 PF07724 AAA domain (Cdc48 subfamily) DYE50_07405 PF10431 C-terminal, D2-small domain, of ClpB protein DYE50_07405 PF17871 AAA lid domain DYE50_07405 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_07405 PF02861 Clp amino terminal domain, pathogenicity island component DYE50_07410 PF18766 SWI2/SNF2 ATPase DYE50_07410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYE50_07410 PF11867 Domain of unknown function (DUF3387) DYE50_07415 PF02661 Fic/DOC family DYE50_07445 PF02384 N-6 DNA Methylase DYE50_07460 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_07465 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DYE50_07490 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) DYE50_07490 PF12733 Cadherin-like beta sandwich domain DYE50_07505 PF00005 ABC transporter DYE50_07510 PF12704 MacB-like periplasmic core domain DYE50_07510 PF02687 FtsX-like permease family DYE50_07520 PF02881 SRP54-type protein, helical bundle domain DYE50_07520 PF00448 SRP54-type protein, GTPase domain DYE50_07550 PF03471 Transporter associated domain DYE50_07550 PF00571 CBS domain DYE50_07555 PF02130 Uncharacterized protein family UPF0054 DYE50_07560 PF07698 7TM receptor with intracellular HD hydrolase DYE50_07560 PF07697 7TM-HD extracellular DYE50_07560 PF01966 HD domain DYE50_07565 PF02562 PhoH-like protein DYE50_07580 PF09383 NIL domain DYE50_07580 PF00005 ABC transporter DYE50_07585 PF02405 Permease MlaE DYE50_07590 PF00483 Nucleotidyl transferase DYE50_07615 PF04542 Sigma-70 region 2 DYE50_07615 PF04545 Sigma-70, region 4 DYE50_07615 PF04539 Sigma-70 region 3 DYE50_07625 PF10609 NUBPL iron-transfer P-loop NTPase DYE50_07630 PF00448 SRP54-type protein, GTPase domain DYE50_07635 PF00771 FHIPEP family DYE50_07640 PF01312 FlhB HrpN YscU SpaS Family DYE50_07645 PF01311 Bacterial export proteins, family 1 DYE50_07650 PF01313 Bacterial export proteins, family 3 DYE50_07655 PF00813 FliP family DYE50_07665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYE50_07670 PF02154 Flagellar motor switch protein FliM DYE50_07670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYE50_07675 PF03748 Flagellar basal body-associated protein FliL DYE50_07680 PF00691 OmpA family DYE50_07680 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYE50_07685 PF01618 MotA/TolQ/ExbB proton channel family DYE50_07690 PF06289 Flagellar and Swarming motility proteins DYE50_07695 PF06969 HemN C-terminal domain DYE50_07695 PF04055 Radical SAM superfamily DYE50_07700 PF10502 Signal peptidase, peptidase S26 DYE50_07705 PF01668 SmpB protein DYE50_07715 PF01300 Telomere recombination DYE50_07735 PF01973 Protein of unknown function DUF115 DYE50_07760 PF08264 Anticodon-binding domain of tRNA DYE50_07760 PF00133 tRNA synthetases class I (I, L, M and V) DYE50_07765 PF01168 Alanine racemase, N-terminal domain DYE50_07775 PF00501 AMP-binding enzyme DYE50_07805 PF02881 SRP54-type protein, helical bundle domain DYE50_07805 PF02978 Signal peptide binding domain DYE50_07805 PF00448 SRP54-type protein, GTPase domain DYE50_07810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DYE50_07810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DYE50_07815 PF00334 Nucleoside diphosphate kinase DYE50_07820 PF02401 LytB protein DYE50_07825 PF00563 EAL domain DYE50_07825 PF03707 Bacterial signalling protein N terminal repeat DYE50_07825 PF00990 Diguanylate cyclase, GGDEF domain DYE50_07830 PF02355 Protein export membrane protein DYE50_07835 PF02355 Protein export membrane protein DYE50_07840 PF02699 Preprotein translocase subunit DYE50_07860 PF01476 LysM domain DYE50_07860 PF01464 Transglycosylase SLT domain DYE50_07865 PF04972 BON domain DYE50_07865 PF00691 OmpA family DYE50_07875 PF00155 Aminotransferase class I and II DYE50_07880 PF01451 Low molecular weight phosphotyrosine protein phosphatase DYE50_07890 PF00440 Bacterial regulatory proteins, tetR family DYE50_07920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYE50_07935 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_07970 PF00155 Aminotransferase class I and II DYE50_07985 PF12392 Collagenase DYE50_07985 PF01136 Peptidase family U32 DYE50_07995 PF02568 Thiamine biosynthesis protein (ThiI) DYE50_07995 PF02926 THUMP domain DYE50_08010 PF00534 Glycosyl transferases group 1 DYE50_08010 PF13439 Glycosyltransferase Family 4 DYE50_08015 PF17764 3′ DNA-binding domain (3′BD) DYE50_08015 PF18074 Primosomal protein N C-terminal domain DYE50_08015 PF00270 DEAD/DEAH box helicase DYE50_08015 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DYE50_08015 PF00271 Helicase conserved C-terminal domain DYE50_08020 PF03167 Uracil DNA glycosylase superfamily DYE50_08025 PF01416 tRNA pseudouridine synthase DYE50_08030 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) DYE50_08035 PF01648 4'-phosphopantetheinyl transferase superfamily DYE50_08045 PF02457 DisA bacterial checkpoint controller nucleotide-binding DYE50_08050 PF00809 Pterin binding enzyme DYE50_08055 PF02780 Transketolase, C-terminal domain DYE50_08055 PF02779 Transketolase, pyrimidine binding domain DYE50_08055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYE50_08070 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DYE50_08070 PF17768 RecJ OB domain DYE50_08070 PF02272 DHHA1 domain DYE50_08070 PF01368 DHH family DYE50_08075 PF00990 Diguanylate cyclase, GGDEF domain DYE50_08075 PF08447 PAS fold DYE50_08075 PF08448 PAS fold DYE50_08075 PF00563 EAL domain DYE50_08080 PF01048 Phosphorylase superfamily DYE50_08090 PF01791 DeoC/LacD family aldolase DYE50_08095 PF13187 4Fe-4S dicluster domain DYE50_08105 PF01464 Transglycosylase SLT domain DYE50_08105 PF10145 Phage-related minor tail protein DYE50_08105 PF01551 Peptidase family M23 DYE50_08115 PF17092 Penicillin-binding protein OB-like domain DYE50_08115 PF00912 Transglycosylase DYE50_08115 PF00905 Penicillin binding protein transpeptidase domain DYE50_08120 PF13361 UvrD-like helicase C-terminal domain DYE50_08120 PF00580 UvrD/REP helicase N-terminal domain DYE50_08125 PF00704 Glycosyl hydrolases family 18 DYE50_08155 PF02954 Bacterial regulatory protein, Fis family DYE50_08155 PF13185 GAF domain DYE50_08155 PF00158 Sigma-54 interaction domain DYE50_08165 PF01479 S4 domain DYE50_08165 PF00849 RNA pseudouridylate synthase DYE50_08170 PF04079 Segregation and condensation complex subunit ScpB DYE50_08175 PF02616 Segregation and condensation protein ScpA DYE50_08180 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYE50_08185 PF00154 recA bacterial DNA recombination protein DYE50_08205 PF00834 Ribulose-phosphate 3 epimerase family DYE50_08245 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DYE50_08245 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DYE50_08255 PF00005 ABC transporter DYE50_08260 PF02653 Branched-chain amino acid transport system / permease component DYE50_08270 PF00990 Diguanylate cyclase, GGDEF domain DYE50_08270 PF17152 Periplasmic sensor domain DYE50_08275 PF02195 ParB-like nuclease domain DYE50_08275 PF17762 HTH domain found in ParB protein DYE50_08280 PF13614 AAA domain DYE50_08290 PF02146 Sir2 family DYE50_08305 PF13333 Integrase core domain DYE50_08305 PF00665 Integrase core domain DYE50_08305 PF13276 HTH-like domain DYE50_08335 PF03129 Anticodon binding domain DYE50_08335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_08345 PF01966 HD domain DYE50_08360 PF00905 Penicillin binding protein transpeptidase domain DYE50_08360 PF03717 Penicillin-binding Protein dimerisation domain DYE50_08365 PF10502 Signal peptidase, peptidase S26 DYE50_08370 PF01464 Transglycosylase SLT domain DYE50_08370 PF01551 Peptidase family M23 DYE50_08370 PF10145 Phage-related minor tail protein DYE50_08380 PF01522 Polysaccharide deacetylase DYE50_08385 PF00657 GDSL-like Lipase/Acylhydrolase DYE50_08390 PF01264 Chorismate synthase DYE50_08395 PF07943 Penicillin-binding protein 5, C-terminal domain DYE50_08395 PF00768 D-alanyl-D-alanine carboxypeptidase DYE50_08400 PF00698 Acyl transferase domain DYE50_08410 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_08410 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_08415 PF07977 FabA-like domain DYE50_08420 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_08425 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_08430 PF00005 ABC transporter DYE50_08435 PF00672 HAMP domain DYE50_08435 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_08450 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) DYE50_08450 PF12733 Cadherin-like beta sandwich domain DYE50_08465 PF01728 FtsJ-like methyltransferase DYE50_08465 PF18125 RlmM ferredoxin-like domain DYE50_08470 PF04204 Homoserine O-succinyltransferase DYE50_08480 PF01136 Peptidase family U32 DYE50_08480 PF16325 Peptidase family U32 C-terminal domain DYE50_08495 PF04607 Region found in RelA / SpoT proteins DYE50_08495 PF13291 ACT domain DYE50_08495 PF02824 TGS domain DYE50_08525 PF08240 Alcohol dehydrogenase GroES-like domain DYE50_08525 PF00107 Zinc-binding dehydrogenase DYE50_08530 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYE50_08530 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYE50_08535 PF00465 Iron-containing alcohol dehydrogenase DYE50_08540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYE50_08545 PF01268 Formate--tetrahydrofolate ligase DYE50_08560 PF00892 EamA-like transporter family DYE50_08565 PF00849 RNA pseudouridylate synthase DYE50_08575 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYE50_08580 PF01960 ArgJ family DYE50_08585 PF00696 Amino acid kinase family DYE50_08590 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_08600 PF00155 Aminotransferase class I and II DYE50_08605 PF02872 5'-nucleotidase, C-terminal domain DYE50_08605 PF00149 Calcineurin-like phosphoesterase DYE50_08610 PF01053 Cys/Met metabolism PLP-dependent enzyme DYE50_08615 PF02082 Transcriptional regulator DYE50_08620 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DYE50_08625 PF18152 DAHP synthase ferredoxin-like domain DYE50_08625 PF00793 DAHP synthetase I family DYE50_08635 PF00814 Glycoprotease family DYE50_08645 PF04545 Sigma-70, region 4 DYE50_08645 PF04542 Sigma-70 region 2 DYE50_08645 PF00140 Sigma-70 factor, region 1.2 DYE50_08645 PF04539 Sigma-70 region 3 DYE50_08645 PF03979 Sigma-70 factor, region 1.1 DYE50_08665 PF01479 S4 domain DYE50_08665 PF00849 RNA pseudouridylate synthase DYE50_08670 PF00285 Citrate synthase, C-terminal domain DYE50_08680 PF03590 Aspartate-ammonia ligase DYE50_08690 PF01063 Amino-transferase class IV DYE50_08695 PF07729 FCD domain DYE50_08695 PF00392 Bacterial regulatory proteins, gntR family DYE50_08705 PF03746 LamB/YcsF family DYE50_08715 PF02653 Branched-chain amino acid transport system / permease component DYE50_08725 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYE50_08725 PF00005 ABC transporter DYE50_08730 PF00005 ABC transporter DYE50_08735 PF02626 Carboxyltransferase domain, subdomain A and B DYE50_08740 PF07286 Protein of unknown function (DUF1445) DYE50_08745 PF00842 Alanine racemase, C-terminal domain DYE50_08745 PF01168 Alanine racemase, N-terminal domain DYE50_08750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYE50_08750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYE50_08755 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYE50_08755 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_08755 PF14310 Fibronectin type III-like domain DYE50_08760 PF12833 Helix-turn-helix domain DYE50_08765 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_08770 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_08790 PF00162 Phosphoglycerate kinase DYE50_08795 PF00121 Triosephosphate isomerase DYE50_08805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYE50_08805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYE50_08820 PF01496 V-type ATPase 116kDa subunit family DYE50_08840 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_08840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_08840 PF16886 ATPsynthase alpha/beta subunit N-term extension DYE50_08845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_08845 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_08850 PF01813 ATP synthase subunit D DYE50_08855 PF00582 Universal stress protein family DYE50_08860 PF00356 Bacterial regulatory proteins, lacI family DYE50_08865 PF01547 Bacterial extracellular solute-binding protein DYE50_08870 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_08875 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_08880 PF00128 Alpha amylase, catalytic domain DYE50_08885 PF03633 Glycosyl hydrolase family 65, C-terminal domain DYE50_08885 PF03636 Glycosyl hydrolase family 65, N-terminal domain DYE50_08885 PF03632 Glycosyl hydrolase family 65 central catalytic domain DYE50_08890 PF00294 pfkB family carbohydrate kinase DYE50_08895 PF01842 ACT domain DYE50_08895 PF00696 Amino acid kinase family DYE50_08895 PF00742 Homoserine dehydrogenase DYE50_08895 PF03447 Homoserine dehydrogenase, NAD binding domain DYE50_08895 PF13840 ACT domain DYE50_08910 PF01113 Dihydrodipicolinate reductase, N-terminus DYE50_08910 PF05173 Dihydrodipicolinate reductase, C-terminus DYE50_08915 PF00156 Phosphoribosyl transferase domain DYE50_08920 PF02608 ABC transporter substrate-binding protein PnrA-like DYE50_08925 PF00072 Response regulator receiver domain DYE50_08930 PF00005 ABC transporter DYE50_08950 PF02915 Rubrerythrin DYE50_08955 PF01979 Amidohydrolase family DYE50_08955 PF13382 Adenine deaminase C-terminal domain DYE50_08965 PF00682 HMGL-like DYE50_08965 PF02436 Conserved carboxylase domain DYE50_08970 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYE50_08990 PF02120 Flagellar hook-length control protein FliK DYE50_08995 PF03963 Flagellar hook capping protein - N-terminal region DYE50_09000 PF00460 Flagella basal body rod protein DYE50_09000 PF07559 Flagellar basal body protein FlaE DYE50_09000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_09015 PF14492 Elongation Factor G, domain II DYE50_09015 PF03764 Elongation factor G, domain IV DYE50_09015 PF00679 Elongation factor G C-terminus DYE50_09015 PF03144 Elongation factor Tu domain 2 DYE50_09015 PF00009 Elongation factor Tu GTP binding domain DYE50_09020 PF07694 5TMR of 5TMR-LYT DYE50_09020 PF00990 Diguanylate cyclase, GGDEF domain DYE50_09025 PF08448 PAS fold DYE50_09025 PF00990 Diguanylate cyclase, GGDEF domain DYE50_09025 PF08447 PAS fold DYE50_09025 PF00563 EAL domain DYE50_09030 PF00512 His Kinase A (phospho-acceptor) domain DYE50_09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_09030 PF01627 Hpt domain DYE50_09030 PF00072 Response regulator receiver domain DYE50_09030 PF00672 HAMP domain DYE50_09030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYE50_09035 PF00072 Response regulator receiver domain DYE50_09055 PF17912 MalK OB fold domain DYE50_09055 PF03459 TOBE domain DYE50_09055 PF00005 ABC transporter DYE50_09060 PF00773 RNB domain DYE50_09065 PF00684 DnaJ central domain DYE50_09065 PF01556 DnaJ C terminal domain DYE50_09065 PF00226 DnaJ domain DYE50_09070 PF00557 Metallopeptidase family M24 DYE50_09075 PF00595 PDZ domain DYE50_09080 PF00829 Ribosomal prokaryotic L21 protein DYE50_09090 PF01016 Ribosomal L27 protein DYE50_09095 PF01926 50S ribosome-binding GTPase DYE50_09095 PF01018 GTP1/OBG DYE50_09100 PF01467 Cytidylyltransferase-like DYE50_09125 PF08544 GHMP kinases C terminal DYE50_09125 PF00288 GHMP kinases N terminal domain DYE50_09130 PF04026 SpoVG DYE50_09140 PF14693 Ribosomal protein TL5, C-terminal domain DYE50_09140 PF01386 Ribosomal L25p family DYE50_09145 PF01171 PP-loop family DYE50_09155 PF13180 PDZ domain DYE50_09160 PF00009 Elongation factor Tu GTP binding domain DYE50_09160 PF06421 GTP-binding protein LepA C-terminus DYE50_09160 PF14492 Elongation Factor G, domain II DYE50_09160 PF00679 Elongation factor G C-terminus DYE50_09160 PF03144 Elongation factor Tu domain 2 DYE50_09165 PF01973 Protein of unknown function DUF115 DYE50_09175 PF00128 Alpha amylase, catalytic domain DYE50_09175 PF02903 Alpha amylase, N-terminal ig-like domain DYE50_09175 PF16657 Maltogenic Amylase, C-terminal domain DYE50_09180 PF12833 Helix-turn-helix domain DYE50_09180 PF02311 AraC-like ligand binding domain DYE50_09185 PF00128 Alpha amylase, catalytic domain DYE50_09190 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_09195 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_09200 PF01547 Bacterial extracellular solute-binding protein DYE50_09215 PF00128 Alpha amylase, catalytic domain DYE50_09215 PF03423 Carbohydrate binding domain (family 25) DYE50_09215 PF01373 Glycosyl hydrolase family 14 DYE50_09220 PF03714 Bacterial pullanase-associated domain DYE50_09220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYE50_09220 PF00128 Alpha amylase, catalytic domain DYE50_09225 PF07470 Glycosyl Hydrolase Family 88 DYE50_09235 PF17239 Family of unknown function (DUF5312) DYE50_09240 PF00180 Isocitrate/isopropylmalate dehydrogenase DYE50_09245 PF01613 Flavin reductase like domain DYE50_09255 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_09260 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_09265 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYE50_09265 PF04616 Glycosyl hydrolases family 43 DYE50_09270 PF00356 Bacterial regulatory proteins, lacI family DYE50_09275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYE50_09275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYE50_09290 PF00156 Phosphoribosyl transferase domain DYE50_09295 PF01740 STAS domain DYE50_09295 PF00916 Sulfate permease family DYE50_09300 PF00753 Metallo-beta-lactamase superfamily DYE50_09300 PF12706 Beta-lactamase superfamily domain DYE50_09305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYE50_09305 PF14572 Phosphoribosyl synthetase-associated domain DYE50_09330 PF16314 Domain of unknown function (DUF4954) DYE50_09335 PF00682 HMGL-like DYE50_09335 PF08502 LeuA allosteric (dimerisation) domain DYE50_09355 PF00117 Glutamine amidotransferase class-I DYE50_09355 PF00958 GMP synthase C terminal domain DYE50_09355 PF02540 NAD synthase DYE50_09365 PF00152 tRNA synthetases class II (D, K and N) DYE50_09365 PF01336 OB-fold nucleic acid binding domain DYE50_09370 PF16868 NMT1-like family DYE50_09385 PF00348 Polyprenyl synthetase DYE50_09410 PF00753 Metallo-beta-lactamase superfamily DYE50_09420 PF01177 Asp/Glu/Hydantoin racemase DYE50_09425 PF00483 Nucleotidyl transferase DYE50_09425 PF01050 Mannose-6-phosphate isomerase DYE50_09430 PF02446 4-alpha-glucanotransferase DYE50_09435 PF02417 Chromate transporter DYE50_09445 PF01048 Phosphorylase superfamily DYE50_09450 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYE50_09450 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYE50_09455 PF00701 Dihydrodipicolinate synthetase family DYE50_09460 PF03744 6-carboxyhexanoate--CoA ligase DYE50_09470 PF00155 Aminotransferase class I and II DYE50_09475 PF00202 Aminotransferase class-III DYE50_09490 PF01238 Phosphomannose isomerase type I DYE50_09500 PF00498 FHA domain DYE50_09500 PF00990 Diguanylate cyclase, GGDEF domain DYE50_09500 PF00563 EAL domain DYE50_09505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYE50_09505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYE50_09510 PF00575 S1 RNA binding domain DYE50_09515 PF00300 Histidine phosphatase superfamily (branch 1) DYE50_09565 PF00293 NUDIX domain DYE50_09565 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_09595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYE50_09600 PF01553 Acyltransferase DYE50_09605 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_09610 PF00005 ABC transporter DYE50_09610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYE50_09615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYE50_09615 PF14572 Phosphoribosyl synthetase-associated domain DYE50_09625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_09630 PF00672 HAMP domain DYE50_09630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_09630 PF02743 Cache domain DYE50_09635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_09650 PF00072 Response regulator receiver domain DYE50_09650 PF01339 CheB methylesterase DYE50_09655 PF01739 CheR methyltransferase, SAM binding domain DYE50_09655 PF03705 CheR methyltransferase, all-alpha domain DYE50_09660 PF01627 Hpt domain DYE50_09660 PF01584 CheW-like domain DYE50_09660 PF00072 Response regulator receiver domain DYE50_09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_09660 PF02895 Signal transducing histidine kinase, homodimeric domain DYE50_09665 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_09670 PF00005 ABC transporter DYE50_09670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYE50_09675 PF03553 Na+/H+ antiporter family DYE50_09685 PF00849 RNA pseudouridylate synthase DYE50_09685 PF01479 S4 domain DYE50_09715 PF01740 STAS domain DYE50_09720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYE50_09730 PF00501 AMP-binding enzyme DYE50_09730 PF00668 Condensation domain DYE50_09730 PF00550 Phosphopantetheine attachment site DYE50_09730 PF13193 AMP-binding enzyme C-terminal domain DYE50_09740 PF00886 Ribosomal protein S16 DYE50_09750 PF01782 RimM N-terminal domain DYE50_09755 PF01746 tRNA (Guanine-1)-methyltransferase DYE50_09760 PF01245 Ribosomal protein L19 DYE50_09770 PF01312 FlhB HrpN YscU SpaS Family DYE50_09780 PF02021 Uncharacterised protein family UPF0102 DYE50_09805 PF01026 TatD related DNase DYE50_09810 PF00342 Phosphoglucose isomerase DYE50_09815 PF01592 NifU-like N terminal domain DYE50_09820 PF00512 His Kinase A (phospho-acceptor) domain DYE50_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_09825 PF00072 Response regulator receiver domain DYE50_09825 PF00486 Transcriptional regulatory protein, C terminal DYE50_09830 PF00180 Isocitrate/isopropylmalate dehydrogenase DYE50_09840 PF00005 ABC transporter DYE50_09845 PF01458 Uncharacterized protein family (UPF0051) DYE50_09850 PF01458 Uncharacterized protein family (UPF0051) DYE50_09860 PF01761 3-dehydroquinate synthase DYE50_09870 PF02223 Thymidylate kinase DYE50_09880 PF07244 Surface antigen variable number repeat DYE50_09880 PF01103 Surface antigen DYE50_09890 PF00488 MutS domain V DYE50_09890 PF05188 MutS domain II DYE50_09890 PF05192 MutS domain III DYE50_09890 PF01624 MutS domain I DYE50_09890 PF05190 MutS family domain IV DYE50_09900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYE50_09900 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_09905 PF01584 CheW-like domain DYE50_09915 PF01513 ATP-NAD kinase DYE50_09920 PF02463 RecF/RecN/SMC N terminal domain DYE50_09935 PF05257 CHAP domain DYE50_09935 PF01476 LysM domain DYE50_09950 PF03330 Lytic transglycolase DYE50_09950 PF05036 Sporulation related domain DYE50_09960 PF00672 HAMP domain DYE50_09960 PF01966 HD domain DYE50_09965 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DYE50_09970 PF05164 Cell division protein ZapA DYE50_09980 PF00453 Ribosomal protein L20 DYE50_09985 PF01632 Ribosomal protein L35 DYE50_09990 PF05198 Translation initiation factor IF-3, N-terminal domain DYE50_09990 PF00707 Translation initiation factor IF-3, C-terminal domain DYE50_09995 PF01189 16S rRNA methyltransferase RsmB/F DYE50_09995 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DYE50_09995 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DYE50_10000 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_10010 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DYE50_10010 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DYE50_10010 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DYE50_10025 PF00005 ABC transporter DYE50_10025 PF17755 UvrA DNA-binding domain DYE50_10025 PF17760 UvrA interaction domain DYE50_10050 PF03193 RsgA GTPase DYE50_10055 PF00488 MutS domain V DYE50_10055 PF01713 Smr domain DYE50_10060 PF00485 Phosphoribulokinase / Uridine kinase family DYE50_10065 PF02863 Arginine repressor, C-terminal domain DYE50_10065 PF01316 Arginine repressor, DNA binding domain DYE50_10075 PF18269 T3SS EscN ATPase C-terminal domain DYE50_10075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_10075 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_10080 PF02108 Flagellar assembly protein FliH DYE50_10085 PF14842 FliG N-terminal domain DYE50_10085 PF14841 FliG middle domain DYE50_10085 PF01706 FliG C-terminal domain DYE50_10090 PF01514 Secretory protein of YscJ/FliF family DYE50_10090 PF08345 Flagellar M-ring protein C-terminal DYE50_10095 PF02049 Flagellar hook-basal body complex protein FliE DYE50_10100 PF00460 Flagella basal body rod protein DYE50_10100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_10110 PF00005 ABC transporter DYE50_10115 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_10120 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_10125 PF00206 Lyase DYE50_10125 PF14698 Argininosuccinate lyase C-terminal DYE50_10130 PF00919 Uncharacterized protein family UPF0004 DYE50_10130 PF04055 Radical SAM superfamily DYE50_10160 PF10431 C-terminal, D2-small domain, of ClpB protein DYE50_10160 PF02861 Clp amino terminal domain, pathogenicity island component DYE50_10160 PF17871 AAA lid domain DYE50_10160 PF07724 AAA domain (Cdc48 subfamily) DYE50_10160 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_10165 PF00163 Ribosomal protein S4/S9 N-terminal domain DYE50_10165 PF01479 S4 domain DYE50_10170 PF03480 Bacterial extracellular solute-binding protein, family 7 DYE50_10170 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DYE50_10175 PF00929 Exonuclease DYE50_10180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYE50_10180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYE50_10180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYE50_10180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYE50_10185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYE50_10185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYE50_10185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYE50_10185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYE50_10195 PF03485 Arginyl tRNA synthetase N terminal domain DYE50_10195 PF05746 DALR anticodon binding domain DYE50_10195 PF00750 tRNA synthetases class I (R) DYE50_10200 PF12850 Calcineurin-like phosphoesterase superfamily domain DYE50_10205 PF04607 Region found in RelA / SpoT proteins DYE50_10210 PF00682 HMGL-like DYE50_10210 PF08502 LeuA allosteric (dimerisation) domain DYE50_10215 PF01242 6-pyruvoyl tetrahydropterin synthase DYE50_10220 PF00072 Response regulator receiver domain DYE50_10230 PF01584 CheW-like domain DYE50_10235 PF01627 Hpt domain DYE50_10235 PF02895 Signal transducing histidine kinase, homodimeric domain DYE50_10235 PF07194 P2 response regulator binding domain DYE50_10235 PF01584 CheW-like domain DYE50_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_10240 PF00551 Formyl transferase DYE50_10250 PF00586 AIR synthase related protein, N-terminal domain DYE50_10250 PF02769 AIR synthase related protein, C-terminal domain DYE50_10255 PF00156 Phosphoribosyl transferase domain DYE50_10260 PF00731 AIR carboxylase DYE50_10265 PF00293 NUDIX domain DYE50_10265 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_10280 PF02424 ApbE family DYE50_10290 PF02653 Branched-chain amino acid transport system / permease component DYE50_10295 PF00005 ABC transporter DYE50_10300 PF13407 Periplasmic binding protein domain DYE50_10305 PF13407 Periplasmic binding protein domain DYE50_10310 PF12833 Helix-turn-helix domain DYE50_10315 PF06580 Histidine kinase DYE50_10315 PF02743 Cache domain DYE50_10315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_10315 PF00672 HAMP domain DYE50_10325 PF00830 Ribosomal L28 family DYE50_10355 PF02637 GatB domain DYE50_10355 PF02934 GatB/GatE catalytic domain DYE50_10365 PF02384 N-6 DNA Methylase DYE50_10380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYE50_10380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYE50_10385 PF01425 Amidase DYE50_10400 PF13361 UvrD-like helicase C-terminal domain DYE50_10400 PF00580 UvrD/REP helicase N-terminal domain DYE50_10405 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_10405 PF00072 Response regulator receiver domain DYE50_10425 PF04055 Radical SAM superfamily DYE50_10425 PF18693 TRAM domain DYE50_10425 PF00919 Uncharacterized protein family UPF0004 DYE50_10440 PF01434 Peptidase family M41 DYE50_10440 PF17862 AAA+ lid domain DYE50_10440 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_10445 PF02561 Flagellar protein FliS DYE50_10460 PF00691 OmpA family DYE50_10460 PF05736 OprF membrane domain DYE50_10485 PF16360 GTP-binding GTPase Middle Region DYE50_10485 PF01926 50S ribosome-binding GTPase DYE50_10485 PF13167 GTP-binding GTPase N-terminal DYE50_10500 PF08281 Sigma-70, region 4 DYE50_10500 PF04542 Sigma-70 region 2 DYE50_10510 PF01551 Peptidase family M23 DYE50_10510 PF10145 Phage-related minor tail protein DYE50_10510 PF01464 Transglycosylase SLT domain DYE50_10515 PF01728 FtsJ-like methyltransferase DYE50_10520 PF01966 HD domain DYE50_10520 PF00013 KH domain DYE50_10520 PF12072 Domain of unknown function (DUF3552) DYE50_10525 PF00005 ABC transporter DYE50_10525 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYE50_10540 PF01739 CheR methyltransferase, SAM binding domain DYE50_10540 PF03705 CheR methyltransferase, all-alpha domain DYE50_10545 PF00072 Response regulator receiver domain DYE50_10545 PF01339 CheB methylesterase DYE50_10550 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYE50_10550 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYE50_10570 PF00005 ABC transporter DYE50_10585 PF13419 Haloacid dehalogenase-like hydrolase DYE50_10600 PF01381 Helix-turn-helix DYE50_10610 PF01751 Toprim domain DYE50_10610 PF00986 DNA gyrase B subunit, carboxyl terminus DYE50_10610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_10610 PF00204 DNA gyrase B DYE50_10615 PF00521 DNA gyrase/topoisomerase IV, subunit A DYE50_10620 PF00072 Response regulator receiver domain DYE50_10620 PF00990 Diguanylate cyclase, GGDEF domain DYE50_10625 PF00990 Diguanylate cyclase, GGDEF domain DYE50_10625 PF08448 PAS fold DYE50_10640 PF01205 Uncharacterized protein family UPF0029 DYE50_10640 PF09186 Domain of unknown function (DUF1949) DYE50_10655 PF13193 AMP-binding enzyme C-terminal domain DYE50_10655 PF00501 AMP-binding enzyme DYE50_10660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYE50_10660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYE50_10670 PF10397 Adenylosuccinate lyase C-terminus DYE50_10670 PF00206 Lyase DYE50_10675 PF00781 Diacylglycerol kinase catalytic domain DYE50_10690 PF02557 D-alanyl-D-alanine carboxypeptidase DYE50_10710 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DYE50_10715 PF01430 Hsp33 protein DYE50_10720 PF00464 Serine hydroxymethyltransferase DYE50_10740 PF01165 Ribosomal protein S21 DYE50_10750 PF07238 PilZ domain DYE50_10775 PF01565 FAD binding domain DYE50_10775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DYE50_10780 PF01406 tRNA synthetases class I (C) catalytic domain DYE50_10780 PF09190 DALR domain DYE50_10795 PF01841 Transglutaminase-like superfamily DYE50_10800 PF00696 Amino acid kinase family DYE50_10815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYE50_10815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYE50_10830 PF02446 4-alpha-glucanotransferase DYE50_10840 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_10840 PF14821 Threonine synthase N terminus DYE50_10850 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_10850 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_10855 PF13416 Bacterial extracellular solute-binding protein DYE50_10860 PF01053 Cys/Met metabolism PLP-dependent enzyme DYE50_10865 PF01555 DNA methylase DYE50_10875 PF03600 Citrate transporter DYE50_10880 PF01676 Metalloenzyme superfamily DYE50_10880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DYE50_10885 PF03707 Bacterial signalling protein N terminal repeat DYE50_10885 PF00990 Diguanylate cyclase, GGDEF domain DYE50_10885 PF00563 EAL domain DYE50_10900 PF04073 Aminoacyl-tRNA editing domain DYE50_10910 PF01808 AICARFT/IMPCHase bienzyme DYE50_10910 PF02142 MGS-like domain DYE50_10925 PF00005 ABC transporter DYE50_10930 PF02311 AraC-like ligand binding domain DYE50_10930 PF12833 Helix-turn-helix domain DYE50_10935 PF13419 Haloacid dehalogenase-like hydrolase DYE50_10940 PF01842 ACT domain DYE50_10940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYE50_10940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYE50_10945 PF00266 Aminotransferase class-V DYE50_10950 PF01228 Glycine radical DYE50_10950 PF02901 Pyruvate formate lyase-like DYE50_10955 PF04055 Radical SAM superfamily DYE50_10960 PF13407 Periplasmic binding protein domain DYE50_10965 PF02833 DHHA2 domain DYE50_10965 PF01368 DHH family DYE50_10970 PF08903 Domain of unknown function (DUF1846) DYE50_10975 PF00202 Aminotransferase class-III DYE50_10980 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_10985 PF00005 ABC transporter DYE50_11005 PF00005 ABC transporter DYE50_11015 PF02779 Transketolase, pyrimidine binding domain DYE50_11015 PF02780 Transketolase, C-terminal domain DYE50_11015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYE50_11035 PF00148 Nitrogenase component 1 type Oxidoreductase DYE50_11045 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_11050 PF00005 ABC transporter DYE50_11060 PF00148 Nitrogenase component 1 type Oxidoreductase DYE50_11070 PF01202 Shikimate kinase DYE50_11080 PF01202 Shikimate kinase DYE50_11085 PF01202 Shikimate kinase DYE50_11095 PF00005 ABC transporter DYE50_11100 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_11105 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_11110 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_11115 PF03466 LysR substrate binding domain DYE50_11115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYE50_11120 PF00148 Nitrogenase component 1 type Oxidoreductase DYE50_11140 PF00255 Glutathione peroxidase DYE50_11150 PF00465 Iron-containing alcohol dehydrogenase DYE50_11155 PF00293 NUDIX domain DYE50_11155 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_11180 PF02579 Dinitrogenase iron-molybdenum cofactor DYE50_11180 PF04055 Radical SAM superfamily DYE50_11185 PF04055 Radical SAM superfamily DYE50_11185 PF06968 Biotin and Thiamin Synthesis associated domain DYE50_11190 PF01554 MatE DYE50_11210 PF01618 MotA/TolQ/ExbB proton channel family DYE50_11240 PF00156 Phosphoribosyl transferase domain DYE50_11245 PF01081 KDPG and KHG aldolase DYE50_11250 PF14310 Fibronectin type III-like domain DYE50_11250 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYE50_11250 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_11280 PF08264 Anticodon-binding domain of tRNA DYE50_11280 PF00133 tRNA synthetases class I (I, L, M and V) DYE50_11280 PF13603 Leucyl-tRNA synthetase, Domain 2 DYE50_11280 PF09334 tRNA synthetases class I (M) DYE50_11285 PF00672 HAMP domain DYE50_11285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_11285 PF02743 Cache domain DYE50_11295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYE50_11300 PF04002 RadC-like JAB domain DYE50_11310 PF00595 PDZ domain DYE50_11330 PF00672 HAMP domain DYE50_11330 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_11345 PF00512 His Kinase A (phospho-acceptor) domain DYE50_11345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_11345 PF09308 LuxQ, periplasmic DYE50_11345 PF00072 Response regulator receiver domain DYE50_11350 PF09285 Elongation factor P, C-terminal DYE50_11350 PF08207 Elongation factor P (EF-P) KOW-like domain DYE50_11350 PF01132 Elongation factor P (EF-P) OB domain DYE50_11395 PF17757 UvrB interaction domain DYE50_11395 PF12344 Ultra-violet resistance protein B DYE50_11395 PF02151 UvrB/uvrC motif DYE50_11395 PF04851 Type III restriction enzyme, res subunit DYE50_11395 PF00271 Helicase conserved C-terminal domain DYE50_11420 PF12833 Helix-turn-helix domain DYE50_11440 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYE50_11440 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYE50_11440 PF00703 Glycosyl hydrolases family 2 DYE50_11440 PF16355 Domain of unknown function (DUF4982) DYE50_11440 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYE50_11450 PF03447 Homoserine dehydrogenase, NAD binding domain DYE50_11450 PF00742 Homoserine dehydrogenase DYE50_11450 PF13840 ACT domain DYE50_11450 PF01842 ACT domain DYE50_11450 PF00696 Amino acid kinase family DYE50_11480 PF00793 DAHP synthetase I family DYE50_11480 PF18152 DAHP synthase ferredoxin-like domain DYE50_11485 PF00990 Diguanylate cyclase, GGDEF domain DYE50_11490 PF00553 Cellulose binding domain DYE50_11490 PF00150 Cellulase (glycosyl hydrolase family 5) DYE50_11495 PF00722 Glycosyl hydrolases family 16 DYE50_11510 PF05230 MASE2 domain DYE50_11510 PF00990 Diguanylate cyclase, GGDEF domain DYE50_11520 PF03714 Bacterial pullanase-associated domain DYE50_11520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYE50_11520 PF00128 Alpha amylase, catalytic domain DYE50_11525 PF00128 Alpha amylase, catalytic domain DYE50_11535 PF03423 Carbohydrate binding domain (family 25) DYE50_11535 PF01373 Glycosyl hydrolase family 14 DYE50_11535 PF00128 Alpha amylase, catalytic domain DYE50_11545 PF08264 Anticodon-binding domain of tRNA DYE50_11545 PF10458 Valyl tRNA synthetase tRNA binding arm DYE50_11545 PF00133 tRNA synthetases class I (I, L, M and V) DYE50_11555 PF03707 Bacterial signalling protein N terminal repeat DYE50_11555 PF00990 Diguanylate cyclase, GGDEF domain DYE50_11555 PF00563 EAL domain DYE50_11560 PF00764 Arginosuccinate synthase DYE50_11565 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_11570 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_11575 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_11585 PF00072 Response regulator receiver domain DYE50_11585 PF00486 Transcriptional regulatory protein, C terminal DYE50_11595 PF03668 P-loop ATPase protein family DYE50_11600 PF00171 Aldehyde dehydrogenase family DYE50_11600 PF00465 Iron-containing alcohol dehydrogenase DYE50_11615 PF00684 DnaJ central domain DYE50_11615 PF00226 DnaJ domain DYE50_11615 PF01556 DnaJ C terminal domain DYE50_11620 PF00012 Hsp70 protein DYE50_11625 PF01025 GrpE DYE50_11630 PF10369 Small subunit of acetolactate synthase DYE50_11645 PF01066 CDP-alcohol phosphatidyltransferase DYE50_11650 PF02666 Phosphatidylserine decarboxylase DYE50_11670 PF00665 Integrase core domain DYE50_11700 PF04002 RadC-like JAB domain DYE50_11705 PF03743 Bacterial conjugation TrbI-like protein DYE50_11725 PF00437 Type II/IV secretion system protein DYE50_11730 PF02534 Type IV secretory system Conjugative DNA transfer DYE50_11745 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DYE50_11820 PF00589 Phage integrase family DYE50_11820 PF12167 Arm DNA-binding domain DYE50_11840 PF05973 Phage derived protein Gp49-like (DUF891) DYE50_11850 PF00589 Phage integrase family DYE50_11865 PF13087 AAA domain DYE50_11865 PF13086 AAA domain DYE50_11865 PF13086 AAA domain DYE50_11865 PF13195 Protein of unknown function (DUF4011) DYE50_11865 PF13195 Protein of unknown function (DUF4011) DYE50_11865 PF13087 AAA domain DYE50_11880 PF01638 HxlR-like helix-turn-helix DYE50_11890 PF08011 PD-(D/E)XK nuclease superfamily DYE50_11890 PF09820 Predicted AAA-ATPase DYE50_11915 PF00005 ABC transporter DYE50_11915 PF00664 ABC transporter transmembrane region DYE50_11920 PF00664 ABC transporter transmembrane region DYE50_11920 PF00005 ABC transporter DYE50_11920 PF08021 Siderophore-interacting FAD-binding domain DYE50_11920 PF04954 Siderophore-interacting protein DYE50_11925 PF00440 Bacterial regulatory proteins, tetR family DYE50_11930 PF00392 Bacterial regulatory proteins, gntR family DYE50_11930 PF07729 FCD domain DYE50_11935 PF00294 pfkB family carbohydrate kinase DYE50_11945 PF00578 AhpC/TSA family DYE50_11950 PF00920 Dehydratase family DYE50_11955 PF00701 Dihydrodipicolinate synthetase family DYE50_11970 PF01970 Tripartite tricarboxylate transporter TctA family DYE50_11990 PF01979 Amidohydrolase family DYE50_12000 PF00295 Glycosyl hydrolases family 28 DYE50_12005 PF06993 Protein of unknown function (DUF1304) DYE50_12010 PF01116 Fructose-bisphosphate aldolase class-II DYE50_12015 PF01380 SIS domain DYE50_12015 PF01418 Helix-turn-helix domain, rpiR family DYE50_12025 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_12030 PF17912 MalK OB fold domain DYE50_12030 PF03459 TOBE domain DYE50_12030 PF00005 ABC transporter DYE50_12045 PF00072 Response regulator receiver domain DYE50_12045 PF12833 Helix-turn-helix domain DYE50_12050 PF06580 Histidine kinase DYE50_12050 PF02743 Cache domain DYE50_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_12050 PF00672 HAMP domain DYE50_12055 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_12060 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_12075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYE50_12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_12120 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DYE50_12120 PF01297 Zinc-uptake complex component A periplasmic DYE50_12125 PF00005 ABC transporter DYE50_12130 PF00950 ABC 3 transport family DYE50_12140 PF14537 Cytochrome c3 DYE50_12140 PF00890 FAD binding domain DYE50_12145 PF00990 Diguanylate cyclase, GGDEF domain DYE50_12160 PF00270 DEAD/DEAH box helicase DYE50_12160 PF00271 Helicase conserved C-terminal domain DYE50_12160 PF09369 Domain of unknown function (DUF1998) DYE50_12165 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_12170 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_12175 PF13416 Bacterial extracellular solute-binding protein DYE50_12180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DYE50_12180 PF12833 Helix-turn-helix domain DYE50_12200 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_12205 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_12210 PF01547 Bacterial extracellular solute-binding protein DYE50_12215 PF00884 Sulfatase DYE50_12220 PF07470 Glycosyl Hydrolase Family 88 DYE50_12230 PF01636 Phosphotransferase enzyme family DYE50_12240 PF00258 Flavodoxin DYE50_12245 PF01797 Transposase IS200 like DYE50_12250 PF01797 Transposase IS200 like DYE50_12275 PF13229 Right handed beta helix region DYE50_12280 PF13344 Haloacid dehalogenase-like hydrolase DYE50_12290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYE50_12290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYE50_12295 PF03447 Homoserine dehydrogenase, NAD binding domain DYE50_12295 PF01958 Domain of unknown function DUF108 DYE50_12330 PF00155 Aminotransferase class I and II DYE50_12340 PF01171 PP-loop family DYE50_12345 PF05684 Protein of unknown function (DUF819) DYE50_12360 PF00403 Heavy-metal-associated domain DYE50_12365 PF16314 Domain of unknown function (DUF4954) DYE50_12370 PF01966 HD domain DYE50_12375 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_12375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYE50_12400 PF09820 Predicted AAA-ATPase DYE50_12400 PF08011 PD-(D/E)XK nuclease superfamily DYE50_12405 PF01022 Bacterial regulatory protein, arsR family DYE50_12425 PF01554 MatE DYE50_12430 PF01554 MatE DYE50_12435 PF01554 MatE DYE50_12440 PF13840 ACT domain DYE50_12440 PF00696 Amino acid kinase family DYE50_12450 PF17912 MalK OB fold domain DYE50_12450 PF00005 ABC transporter DYE50_12450 PF03459 TOBE domain DYE50_12455 PF02664 S-Ribosylhomocysteinase (LuxS) DYE50_12460 PF01048 Phosphorylase superfamily DYE50_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYE50_12475 PF03466 LysR substrate binding domain DYE50_12490 PF00817 impB/mucB/samB family DYE50_12490 PF11798 IMS family HHH motif DYE50_12490 PF11799 impB/mucB/samB family C-terminal domain DYE50_12510 PF07729 FCD domain DYE50_12510 PF00392 Bacterial regulatory proteins, gntR family DYE50_12515 PF01266 FAD dependent oxidoreductase DYE50_12520 PF04324 BFD-like [2Fe-2S] binding domain DYE50_12520 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_12615 PF01554 MatE