locus-tag class description HRI97_00005 PF00308 Bacterial dnaA protein HRI97_00005 PF08299 Bacterial dnaA protein helix-turn-helix HRI97_00005 PF11638 DnaA N-terminal domain HRI97_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HRI97_00010 PF02767 DNA polymerase III beta subunit, central domain HRI97_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HRI97_00015 PF02463 RecF/RecN/SMC N terminal domain HRI97_00025 PF18766 SWI2/SNF2 ATPase HRI97_00025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HRI97_00025 PF12008 Type I restriction and modification enzyme - subunit R C terminal HRI97_00030 PF02384 N-6 DNA Methylase HRI97_00050 PF02899 Phage integrase, N-terminal SAM-like domain HRI97_00050 PF00589 Phage integrase family HRI97_00065 PF00468 Ribosomal protein L34 HRI97_00070 PF00825 Ribonuclease P HRI97_00075 PF01809 Putative membrane protein insertion efficiency factor HRI97_00080 PF14849 YidC periplasmic domain HRI97_00080 PF02096 60Kd inner membrane protein HRI97_00085 PF14804 Jag N-terminus HRI97_00085 PF01424 R3H domain HRI97_00090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRI97_00095 PF00696 Amino acid kinase family HRI97_00095 PF00583 Acetyltransferase (GNAT) family HRI97_00120 PF02646 RmuC family HRI97_00130 PF12850 Calcineurin-like phosphoesterase superfamily domain HRI97_00140 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_00145 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_00150 PF01547 Bacterial extracellular solute-binding protein HRI97_00155 PF00588 SpoU rRNA Methylase family HRI97_00155 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRI97_00170 PF13458 Periplasmic binding protein HRI97_00175 PF02653 Branched-chain amino acid transport system / permease component HRI97_00180 PF11862 Domain of unknown function (DUF3382) HRI97_00180 PF02653 Branched-chain amino acid transport system / permease component HRI97_00185 PF00005 ABC transporter HRI97_00185 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRI97_00190 PF00005 ABC transporter HRI97_00195 PF00391 PEP-utilising enzyme, mobile domain HRI97_00195 PF02896 PEP-utilising enzyme, TIM barrel domain HRI97_00195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HRI97_00200 PF00293 NUDIX domain HRI97_00220 PF00580 UvrD/REP helicase N-terminal domain HRI97_00220 PF13361 UvrD-like helicase C-terminal domain HRI97_00225 PF01381 Helix-turn-helix HRI97_00240 PF01613 Flavin reductase like domain HRI97_00245 PF02677 Epoxyqueuosine reductase QueH HRI97_00255 PF00117 Glutamine amidotransferase class-I HRI97_00270 PF00005 ABC transporter HRI97_00275 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_00285 PF04191 Phospholipid methyltransferase HRI97_00290 PF00664 ABC transporter transmembrane region HRI97_00290 PF00005 ABC transporter HRI97_00295 PF00664 ABC transporter transmembrane region HRI97_00295 PF00005 ABC transporter HRI97_00300 PF00664 ABC transporter transmembrane region HRI97_00300 PF00005 ABC transporter HRI97_00310 PF08361 MAATS-type transcriptional repressor, C-terminal region HRI97_00310 PF00440 Bacterial regulatory proteins, tetR family HRI97_00320 PF00892 EamA-like transporter family HRI97_00325 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRI97_00325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRI97_00330 PF03537 Glycoside-hydrolase family GH114 HRI97_00340 PF01479 S4 domain HRI97_00340 PF00849 RNA pseudouridylate synthase HRI97_00350 PF00892 EamA-like transporter family HRI97_00355 PF02127 Aminopeptidase I zinc metalloprotease (M18) HRI97_00365 PF09339 IclR helix-turn-helix domain HRI97_00365 PF01614 Bacterial transcriptional regulator HRI97_00370 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_00375 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_00380 PF01547 Bacterial extracellular solute-binding protein HRI97_00385 PF00480 ROK family HRI97_00390 PF01380 SIS domain HRI97_00395 PF01418 Helix-turn-helix domain, rpiR family HRI97_00395 PF01380 SIS domain HRI97_00400 PF00171 Aldehyde dehydrogenase family HRI97_00435 PF02535 ZIP Zinc transporter HRI97_00455 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_00485 PF13344 Haloacid dehalogenase-like hydrolase HRI97_00490 PF00356 Bacterial regulatory proteins, lacI family HRI97_00495 PF03480 Bacterial extracellular solute-binding protein, family 7 HRI97_00505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HRI97_00505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HRI97_00510 PF03009 Glycerophosphoryl diester phosphodiesterase family HRI97_00520 PF00248 Aldo/keto reductase family HRI97_00530 PF01042 Endoribonuclease L-PSP HRI97_00535 PF01161 Phosphatidylethanolamine-binding protein HRI97_00575 PF01638 HxlR-like helix-turn-helix HRI97_00585 PF02502 Ribose/Galactose Isomerase HRI97_00590 PF07005 Sugar-binding N-terminal domain HRI97_00590 PF17042 Nucleotide-binding C-terminal domain HRI97_00595 PF00465 Iron-containing alcohol dehydrogenase HRI97_00600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HRI97_00615 PF00542 Ribosomal protein L7/L12 C-terminal domain HRI97_00615 PF16320 Ribosomal protein L7/L12 dimerisation domain HRI97_00635 PF00196 Bacterial regulatory proteins, luxR family HRI97_00635 PF00072 Response regulator receiver domain HRI97_00640 PF00265 Thymidine kinase HRI97_00645 PF03480 Bacterial extracellular solute-binding protein, family 7 HRI97_00650 PF05025 RbsD / FucU transport protein family HRI97_00655 PF13808 DDE_Tnp_1-associated HRI97_00655 PF01609 Transposase DDE domain HRI97_00660 PF00990 Diguanylate cyclase, GGDEF domain HRI97_00665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRI97_00675 PF00440 Bacterial regulatory proteins, tetR family HRI97_00680 PF02926 THUMP domain HRI97_00680 PF01170 Putative RNA methylase family UPF0020 HRI97_00685 PF00027 Cyclic nucleotide-binding domain HRI97_00685 PF01734 Patatin-like phospholipase HRI97_00690 PF04377 Arginine-tRNA-protein transferase, C terminus HRI97_00690 PF04376 Arginine-tRNA-protein transferase, N terminus HRI97_00695 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRI97_00705 PF00005 ABC transporter HRI97_00715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HRI97_00720 PF00890 FAD binding domain HRI97_00720 PF04205 FMN-binding domain HRI97_00720 PF03358 NADPH-dependent FMN reductase HRI97_00725 PF00701 Dihydrodipicolinate synthetase family HRI97_00730 PF03401 Tripartite tricarboxylate transporter family receptor HRI97_00740 PF01970 Tripartite tricarboxylate transporter TctA family HRI97_00745 PF00890 FAD binding domain HRI97_00745 PF04205 FMN-binding domain HRI97_00745 PF03358 NADPH-dependent FMN reductase HRI97_00750 PF01180 Dihydroorotate dehydrogenase HRI97_00760 PF00575 S1 RNA binding domain HRI97_00765 PF01758 Sodium Bile acid symporter family HRI97_00770 PF01066 CDP-alcohol phosphatidyltransferase HRI97_00780 PF12437 Glutamine synthetase type III N terminal HRI97_00780 PF18318 Glutamine synthetase C-terminal domain HRI97_00780 PF00120 Glutamine synthetase, catalytic domain HRI97_00785 PF13458 Periplasmic binding protein HRI97_00790 PF02653 Branched-chain amino acid transport system / permease component HRI97_00795 PF02653 Branched-chain amino acid transport system / permease component HRI97_00795 PF11862 Domain of unknown function (DUF3382) HRI97_00800 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRI97_00800 PF00005 ABC transporter HRI97_00805 PF00005 ABC transporter HRI97_00810 PF02733 Dak1 domain HRI97_00820 PF03313 Serine dehydratase alpha chain HRI97_00830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HRI97_00830 PF02843 Phosphoribosylglycinamide synthetase, C domain HRI97_00830 PF02844 Phosphoribosylglycinamide synthetase, N domain HRI97_00840 PF03812 2-keto-3-deoxygluconate permease HRI97_00845 PF09861 Lactate racemase N-terminal domain HRI97_00855 PF00700 Bacterial flagellin C-terminal helical region HRI97_00855 PF00669 Bacterial flagellin N-terminal helical region HRI97_00860 PF00578 AhpC/TSA family HRI97_00860 PF10417 C-terminal domain of 1-Cys peroxiredoxin HRI97_00865 PF01177 Asp/Glu/Hydantoin racemase HRI97_00870 PF01960 ArgJ family HRI97_00875 PF00696 Amino acid kinase family HRI97_00880 PF00202 Aminotransferase class-III HRI97_00895 PF01425 Amidase HRI97_00900 PF02934 GatB/GatE catalytic domain HRI97_00900 PF02637 GatB domain HRI97_00925 PF01609 Transposase DDE domain HRI97_00925 PF13808 DDE_Tnp_1-associated HRI97_00950 PF12072 Domain of unknown function (DUF3552) HRI97_00950 PF00013 KH domain HRI97_00950 PF01966 HD domain HRI97_00955 PF02082 Transcriptional regulator HRI97_00960 PF00072 Response regulator receiver domain HRI97_00970 PF00171 Aldehyde dehydrogenase family HRI97_00975 PF00696 Amino acid kinase family HRI97_00980 PF14748 Pyrroline-5-carboxylate reductase dimerisation HRI97_00980 PF03807 NADP oxidoreductase coenzyme F420-dependent HRI97_01000 PF00180 Isocitrate/isopropylmalate dehydrogenase HRI97_01005 PF00155 Aminotransferase class I and II HRI97_01015 PF07194 P2 response regulator binding domain HRI97_01015 PF01627 Hpt domain HRI97_01015 PF02895 Signal transducing histidine kinase, homodimeric domain HRI97_01015 PF01584 CheW-like domain HRI97_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_01020 PF01584 CheW-like domain HRI97_01030 PF00072 Response regulator receiver domain HRI97_01040 PF16258 Domain of unknown function (DUF4912) HRI97_01070 PF04205 FMN-binding domain HRI97_01070 PF00890 FAD binding domain HRI97_01075 PF01451 Low molecular weight phosphotyrosine protein phosphatase HRI97_01080 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRI97_01100 PF00698 Acyl transferase domain HRI97_01110 PF00109 Beta-ketoacyl synthase, N-terminal domain HRI97_01110 PF02801 Beta-ketoacyl synthase, C-terminal domain HRI97_01115 PF07977 FabA-like domain HRI97_01125 PF00005 ABC transporter HRI97_01130 PF00704 Glycosyl hydrolases family 18 HRI97_01140 PF06123 Inner membrane protein CreD HRI97_01155 PF10996 Beta-Casp domain HRI97_01155 PF00753 Metallo-beta-lactamase superfamily HRI97_01155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HRI97_01175 PF00365 Phosphofructokinase HRI97_01180 PF04011 LemA family HRI97_01190 PF04536 TPM domain HRI97_01200 PF01032 FecCD transport family HRI97_01205 PF00005 ABC transporter HRI97_01205 PF12558 ATP-binding cassette cobalt transporter HRI97_01220 PF00270 DEAD/DEAH box helicase HRI97_01220 PF00271 Helicase conserved C-terminal domain HRI97_01220 PF08482 ATP-dependent helicase C-terminal HRI97_01220 PF04408 Helicase associated domain (HA2) HRI97_01260 PF03819 MazG nucleotide pyrophosphohydrolase domain HRI97_01265 PF01195 Peptidyl-tRNA hydrolase HRI97_01270 PF00403 Heavy-metal-associated domain HRI97_01280 PF01022 Bacterial regulatory protein, arsR family HRI97_01300 PF00005 ABC transporter HRI97_01305 PF01741 Large-conductance mechanosensitive channel, MscL HRI97_01330 PF00300 Histidine phosphatase superfamily (branch 1) HRI97_01335 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HRI97_01335 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HRI97_01345 PF00075 RNase H HRI97_01355 PF13291 ACT domain HRI97_01355 PF04607 Region found in RelA / SpoT proteins HRI97_01355 PF02824 TGS domain HRI97_01365 PF03129 Anticodon binding domain HRI97_01365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRI97_01375 PF00871 Acetokinase family HRI97_01380 PF10397 Adenylosuccinate lyase C-terminus HRI97_01380 PF00206 Lyase HRI97_01390 PF04073 Aminoacyl-tRNA editing domain HRI97_01395 PF02690 Na+/Pi-cotransporter HRI97_01445 PF02511 Thymidylate synthase complementing protein HRI97_01450 PF02527 rRNA small subunit methyltransferase G HRI97_01470 PF01256 Carbohydrate kinase HRI97_01470 PF03853 YjeF-related protein N-terminus HRI97_01480 PF02673 Bacitracin resistance protein BacA HRI97_01485 PF01979 Amidohydrolase family HRI97_01490 PF13580 SIS domain HRI97_01510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HRI97_01515 PF00356 Bacterial regulatory proteins, lacI family HRI97_01515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HRI97_01520 PF02163 Peptidase family M50 HRI97_01545 PF00258 Flavodoxin HRI97_01545 PF00753 Metallo-beta-lactamase superfamily HRI97_01620 PF17854 FtsK alpha domain HRI97_01620 PF09397 Ftsk gamma domain HRI97_01620 PF01580 FtsK/SpoIIIE family HRI97_01630 PF02773 S-adenosylmethionine synthetase, C-terminal domain HRI97_01630 PF02772 S-adenosylmethionine synthetase, central domain HRI97_01630 PF00438 S-adenosylmethionine synthetase, N-terminal domain HRI97_01635 PF10576 Iron-sulfur binding domain of endonuclease III HRI97_01635 PF00633 Helix-hairpin-helix motif HRI97_01635 PF00730 HhH-GPD superfamily base excision DNA repair protein HRI97_01640 PF00924 Mechanosensitive ion channel HRI97_01645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRI97_01645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRI97_01645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRI97_01645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRI97_01650 PF16314 Domain of unknown function (DUF4954) HRI97_01660 PF00149 Calcineurin-like phosphoesterase HRI97_01660 PF02872 5'-nucleotidase, C-terminal domain HRI97_01665 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HRI97_01670 PF00696 Amino acid kinase family HRI97_01680 PF06832 Penicillin-Binding Protein C-terminus Family HRI97_01680 PF00905 Penicillin binding protein transpeptidase domain HRI97_01680 PF00912 Transglycosylase HRI97_01685 PF00207 Alpha-2-macroglobulin family HRI97_01685 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HRI97_01685 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HRI97_01685 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HRI97_01685 PF17962 Bacterial macroglobulin domain 6 HRI97_01685 PF01835 MG2 domain HRI97_01685 PF07703 Alpha-2-macroglobulin bait region domain HRI97_01690 PF00465 Iron-containing alcohol dehydrogenase HRI97_01695 PF05167 Uncharacterised ACR (DUF711) HRI97_01705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRI97_01705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRI97_01710 PF01266 FAD dependent oxidoreductase HRI97_01715 PF04324 BFD-like [2Fe-2S] binding domain HRI97_01715 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRI97_01725 PF01409 tRNA synthetases class II core domain (F) HRI97_01770 PF01207 Dihydrouridine synthase (Dus) HRI97_01775 PF01026 TatD related DNase HRI97_01805 PF04545 Sigma-70, region 4 HRI97_01805 PF04542 Sigma-70 region 2 HRI97_01805 PF04539 Sigma-70 region 3 HRI97_01810 PF01406 tRNA synthetases class I (C) catalytic domain HRI97_01810 PF09190 DALR domain HRI97_01815 PF01565 FAD binding domain HRI97_01815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HRI97_01820 PF00027 Cyclic nucleotide-binding domain HRI97_01820 PF13545 Crp-like helix-turn-helix domain HRI97_01840 PF07238 PilZ domain HRI97_01845 PF01165 Ribosomal protein S21 HRI97_01875 PF02653 Branched-chain amino acid transport system / permease component HRI97_01880 PF00005 ABC transporter HRI97_01910 PF03006 Haemolysin-III related HRI97_01915 PF01026 TatD related DNase HRI97_01920 PF13193 AMP-binding enzyme C-terminal domain HRI97_01920 PF00501 AMP-binding enzyme HRI97_01930 PF00211 Adenylate and Guanylate cyclase catalytic domain HRI97_01935 PF03129 Anticodon binding domain HRI97_01935 PF04073 Aminoacyl-tRNA editing domain HRI97_01935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRI97_01950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HRI97_01950 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRI97_01955 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HRI97_01955 PF00970 Oxidoreductase FAD-binding domain HRI97_01955 PF00175 Oxidoreductase NAD-binding domain HRI97_01965 PF17674 HHH domain HRI97_01965 PF09371 Tex-like protein N-terminal domain HRI97_01965 PF16921 Tex protein YqgF-like domain HRI97_01965 PF00575 S1 RNA binding domain HRI97_01975 PF02629 CoA binding domain HRI97_01975 PF06971 Putative DNA-binding protein N-terminus HRI97_02000 PF00266 Aminotransferase class-V HRI97_02005 PF01842 ACT domain HRI97_02005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRI97_02005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRI97_02015 PF02617 ATP-dependent Clp protease adaptor protein ClpS HRI97_02020 PF07724 AAA domain (Cdc48 subfamily) HRI97_02020 PF00004 ATPase family associated with various cellular activities (AAA) HRI97_02020 PF10431 C-terminal, D2-small domain, of ClpB protein HRI97_02020 PF02861 Clp amino terminal domain, pathogenicity island component HRI97_02020 PF17871 AAA lid domain HRI97_02025 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HRI97_02035 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_02045 PF01966 HD domain HRI97_02045 PF13286 Phosphohydrolase-associated domain HRI97_02050 PF03600 Citrate transporter HRI97_02065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRI97_02065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRI97_02075 PF00072 Response regulator receiver domain HRI97_02075 PF02954 Bacterial regulatory protein, Fis family HRI97_02075 PF00158 Sigma-54 interaction domain HRI97_02105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRI97_02110 PF07687 Peptidase dimerisation domain HRI97_02110 PF01546 Peptidase family M20/M25/M40 HRI97_02130 PF01551 Peptidase family M23 HRI97_02130 PF10145 Phage-related minor tail protein HRI97_02130 PF01464 Transglycosylase SLT domain HRI97_02135 PF10502 Signal peptidase, peptidase S26 HRI97_02140 PF03717 Penicillin-binding Protein dimerisation domain HRI97_02140 PF00905 Penicillin binding protein transpeptidase domain HRI97_02150 PF00072 Response regulator receiver domain HRI97_02150 PF01966 HD domain HRI97_02155 PF01053 Cys/Met metabolism PLP-dependent enzyme HRI97_02160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRI97_02160 PF00672 HAMP domain HRI97_02160 PF02743 Cache domain HRI97_02165 PF00140 Sigma-70 factor, region 1.2 HRI97_02165 PF04542 Sigma-70 region 2 HRI97_02165 PF04539 Sigma-70 region 3 HRI97_02165 PF04545 Sigma-70, region 4 HRI97_02165 PF03979 Sigma-70 factor, region 1.1 HRI97_02170 PF00270 DEAD/DEAH box helicase HRI97_02170 PF00271 Helicase conserved C-terminal domain HRI97_02170 PF17191 RecG wedge domain HRI97_02180 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRI97_02180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRI97_02180 PF14579 Helix-hairpin-helix motif HRI97_02180 PF02811 PHP domain HRI97_02200 PF00216 Bacterial DNA-binding protein HRI97_02210 PF03144 Elongation factor Tu domain 2 HRI97_02210 PF00009 Elongation factor Tu GTP binding domain HRI97_02210 PF03143 Elongation factor Tu C-terminal domain HRI97_02215 PF00338 Ribosomal protein S10p/S20e HRI97_02220 PF00297 Ribosomal protein L3 HRI97_02225 PF00573 Ribosomal protein L4/L1 family HRI97_02230 PF00276 Ribosomal protein L23 HRI97_02235 PF00181 Ribosomal Proteins L2, RNA binding domain HRI97_02235 PF03947 Ribosomal Proteins L2, C-terminal domain HRI97_02240 PF00203 Ribosomal protein S19 HRI97_02245 PF00237 Ribosomal protein L22p/L17e HRI97_02250 PF07650 KH domain HRI97_02250 PF00189 Ribosomal protein S3, C-terminal domain HRI97_02255 PF00252 Ribosomal protein L16p/L10e HRI97_02260 PF00831 Ribosomal L29 protein HRI97_02265 PF00366 Ribosomal protein S17 HRI97_02270 PF00238 Ribosomal protein L14p/L23e HRI97_02275 PF00467 KOW motif HRI97_02275 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HRI97_02280 PF00281 Ribosomal protein L5 HRI97_02280 PF00673 ribosomal L5P family C-terminus HRI97_02285 PF00253 Ribosomal protein S14p/S29e HRI97_02290 PF00410 Ribosomal protein S8 HRI97_02295 PF00347 Ribosomal protein L6 HRI97_02300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HRI97_02305 PF00333 Ribosomal protein S5, N-terminal domain HRI97_02305 PF03719 Ribosomal protein S5, C-terminal domain HRI97_02310 PF00327 Ribosomal protein L30p/L7e HRI97_02315 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HRI97_02320 PF00344 SecY translocase HRI97_02325 PF00444 Ribosomal protein L36 HRI97_02330 PF00416 Ribosomal protein S13/S18 HRI97_02335 PF00411 Ribosomal protein S11 HRI97_02340 PF01000 RNA polymerase Rpb3/RpoA insert domain HRI97_02340 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HRI97_02340 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HRI97_02345 PF01196 Ribosomal protein L17 HRI97_02365 PF00483 Nucleotidyl transferase HRI97_02365 PF01050 Mannose-6-phosphate isomerase HRI97_02380 PF00152 tRNA synthetases class II (D, K and N) HRI97_02380 PF01336 OB-fold nucleic acid binding domain HRI97_02380 PF02938 GAD domain HRI97_02385 PF02424 ApbE family HRI97_02395 PF01432 Peptidase family M3 HRI97_02395 PF08439 Oligopeptidase F HRI97_02400 PF00962 Adenosine/AMP deaminase HRI97_02405 PF00501 AMP-binding enzyme HRI97_02420 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRI97_02425 PF01915 Glycosyl hydrolase family 3 C-terminal domain HRI97_02425 PF00933 Glycosyl hydrolase family 3 N terminal domain HRI97_02435 PF03942 DTW domain HRI97_02440 PF00085 Thioredoxin HRI97_02445 PF01554 MatE HRI97_02450 PF01502 Phosphoribosyl-AMP cyclohydrolase HRI97_02450 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HRI97_02460 PF00768 D-alanyl-D-alanine carboxypeptidase HRI97_02460 PF07943 Penicillin-binding protein 5, C-terminal domain HRI97_02465 PF01264 Chorismate synthase HRI97_02470 PF07650 KH domain HRI97_02470 PF01926 50S ribosome-binding GTPase HRI97_02475 PF00128 Alpha amylase, catalytic domain HRI97_02475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HRI97_02480 PF00343 Carbohydrate phosphorylase HRI97_02490 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRI97_02495 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_02500 PF00005 ABC transporter HRI97_02505 PF01554 MatE HRI97_02520 PF00005 ABC transporter HRI97_02520 PF09383 NIL domain HRI97_02525 PF01649 Ribosomal protein S20 HRI97_02530 PF00216 Bacterial DNA-binding protein HRI97_02535 PF00795 Carbon-nitrogen hydrolase HRI97_02545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRI97_02545 PF07497 Rho termination factor, RNA-binding domain HRI97_02545 PF07498 Rho termination factor, N-terminal domain HRI97_02550 PF01197 Ribosomal protein L31 HRI97_02555 PF10672 S-adenosylmethionine-dependent methyltransferase HRI97_02560 PF00271 Helicase conserved C-terminal domain HRI97_02560 PF00270 DEAD/DEAH box helicase HRI97_02565 PF12848 ABC transporter HRI97_02565 PF00005 ABC transporter HRI97_02570 PF10282 Lactonase, 7-bladed beta-propeller HRI97_02575 PF13361 UvrD-like helicase C-terminal domain HRI97_02575 PF00580 UvrD/REP helicase N-terminal domain HRI97_02605 PF03963 Flagellar hook capping protein - N-terminal region HRI97_02610 PF00460 Flagella basal body rod protein HRI97_02610 PF07559 Flagellar basal body protein FlaE HRI97_02610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRI97_02620 PF01790 Prolipoprotein diacylglyceryl transferase HRI97_02625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRI97_02630 PF00990 Diguanylate cyclase, GGDEF domain HRI97_02630 PF00072 Response regulator receiver domain HRI97_02635 PF01343 Peptidase family S49 HRI97_02650 PF01207 Dihydrouridine synthase (Dus) HRI97_02660 PF00005 ABC transporter HRI97_02660 PF08402 TOBE domain HRI97_02665 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_02675 PF01025 GrpE HRI97_02680 PF00012 Hsp70 protein HRI97_02685 PF00226 DnaJ domain HRI97_02685 PF01556 DnaJ C terminal domain HRI97_02685 PF00684 DnaJ central domain HRI97_02690 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HRI97_02690 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HRI97_02710 PF07726 ATPase family associated with various cellular activities (AAA) HRI97_02710 PF17863 AAA lid domain HRI97_02715 PF01882 Protein of unknown function DUF58 HRI97_02725 PF00092 von Willebrand factor type A domain HRI97_02740 PF01713 Smr domain HRI97_02745 PF01556 DnaJ C terminal domain HRI97_02745 PF00226 DnaJ domain HRI97_02745 PF00684 DnaJ central domain HRI97_02750 PF01176 Translation initiation factor 1A / IF-1 HRI97_02755 PF01258 Prokaryotic dksA/traR C4-type zinc finger HRI97_02785 PF00672 HAMP domain HRI97_02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_02785 PF00512 His Kinase A (phospho-acceptor) domain HRI97_02785 PF01627 Hpt domain HRI97_02785 PF00072 Response regulator receiver domain HRI97_02785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRI97_02790 PF00072 Response regulator receiver domain HRI97_02790 PF00486 Transcriptional regulatory protein, C terminal HRI97_02795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRI97_02805 PF00465 Iron-containing alcohol dehydrogenase HRI97_02810 PF00588 SpoU rRNA Methylase family HRI97_02810 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRI97_02815 PF08668 HDOD domain HRI97_02825 PF01784 NIF3 (NGG1p interacting factor 3) HRI97_02850 PF00471 Ribosomal protein L33 HRI97_02860 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HRI97_02865 PF00467 KOW motif HRI97_02865 PF02357 Transcription termination factor nusG HRI97_02870 PF00298 Ribosomal protein L11, RNA binding domain HRI97_02870 PF03946 Ribosomal protein L11, N-terminal domain HRI97_02875 PF00687 Ribosomal protein L1p/L10e family HRI97_02880 PF00466 Ribosomal protein L10 HRI97_02885 PF16320 Ribosomal protein L7/L12 dimerisation domain HRI97_02885 PF00542 Ribosomal protein L7/L12 C-terminal domain HRI97_02890 PF04561 RNA polymerase Rpb2, domain 2 HRI97_02890 PF04565 RNA polymerase Rpb2, domain 3 HRI97_02890 PF04560 RNA polymerase Rpb2, domain 7 HRI97_02890 PF04563 RNA polymerase beta subunit HRI97_02890 PF10385 RNA polymerase beta subunit external 1 domain HRI97_02890 PF00562 RNA polymerase Rpb2, domain 6 HRI97_02895 PF04997 RNA polymerase Rpb1, domain 1 HRI97_02895 PF00623 RNA polymerase Rpb1, domain 2 HRI97_02895 PF04983 RNA polymerase Rpb1, domain 3 HRI97_02895 PF05000 RNA polymerase Rpb1, domain 4 HRI97_02895 PF04998 RNA polymerase Rpb1, domain 5 HRI97_02900 PF00164 Ribosomal protein S12/S23 HRI97_02905 PF00177 Ribosomal protein S7p/S5e HRI97_02910 PF00829 Ribosomal prokaryotic L21 protein HRI97_02920 PF01016 Ribosomal L27 protein HRI97_02925 PF01018 GTP1/OBG HRI97_02925 PF01926 50S ribosome-binding GTPase HRI97_02930 PF01467 Cytidylyltransferase-like HRI97_02965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRI97_02965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRI97_02970 PF10509 Galactokinase galactose-binding signature HRI97_02970 PF08544 GHMP kinases C terminal HRI97_02970 PF00288 GHMP kinases N terminal domain HRI97_02980 PF00571 CBS domain HRI97_02980 PF01368 DHH family HRI97_02980 PF02833 DHHA2 domain HRI97_02980 PF07085 DRTGG domain HRI97_02985 PF08264 Anticodon-binding domain of tRNA HRI97_02985 PF00133 tRNA synthetases class I (I, L, M and V) HRI97_02985 PF13603 Leucyl-tRNA synthetase, Domain 2 HRI97_02985 PF09334 tRNA synthetases class I (M) HRI97_02990 PF13419 Haloacid dehalogenase-like hydrolase HRI97_02995 PF01554 MatE HRI97_03020 PF10609 NUBPL iron-transfer P-loop NTPase HRI97_03025 PF04024 PspC domain HRI97_03030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRI97_03030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRI97_03030 PF03129 Anticodon binding domain HRI97_03035 PF13350 Tyrosine phosphatase family HRI97_03060 PF05973 Phage derived protein Gp49-like (DUF891) HRI97_03065 PF01381 Helix-turn-helix HRI97_03090 PF02580 D-Tyr-tRNA(Tyr) deacylase HRI97_03110 PF01238 Phosphomannose isomerase type I HRI97_03115 PF00899 ThiF family HRI97_03120 PF02608 ABC transporter substrate-binding protein PnrA-like HRI97_03125 PF00128 Alpha amylase, catalytic domain HRI97_03125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HRI97_03125 PF03714 Bacterial pullanase-associated domain HRI97_03160 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRI97_03160 PF01926 50S ribosome-binding GTPase HRI97_03165 PF05524 PEP-utilising enzyme, N-terminal HRI97_03165 PF02896 PEP-utilising enzyme, TIM barrel domain HRI97_03165 PF00391 PEP-utilising enzyme, mobile domain HRI97_03170 PF01039 Carboxyl transferase domain HRI97_03200 PF01145 SPFH domain / Band 7 family HRI97_03205 PF01145 SPFH domain / Band 7 family HRI97_03210 PF00140 Sigma-70 factor, region 1.2 HRI97_03210 PF04542 Sigma-70 region 2 HRI97_03210 PF04539 Sigma-70 region 3 HRI97_03210 PF04545 Sigma-70, region 4 HRI97_03210 PF03979 Sigma-70 factor, region 1.1 HRI97_03225 PF00814 Glycoprotease family HRI97_03235 PF00764 Arginosuccinate synthase HRI97_03255 PF03358 NADPH-dependent FMN reductase HRI97_03255 PF04205 FMN-binding domain HRI97_03255 PF00890 FAD binding domain HRI97_03260 PF00027 Cyclic nucleotide-binding domain HRI97_03260 PF13302 Acetyltransferase (GNAT) domain HRI97_03270 PF13335 Magnesium chelatase, subunit ChlI C-terminal HRI97_03270 PF01078 Magnesium chelatase, subunit ChlI HRI97_03285 PF00270 DEAD/DEAH box helicase HRI97_03285 PF00271 Helicase conserved C-terminal domain HRI97_03285 PF00570 HRDC domain HRI97_03285 PF16124 RecQ zinc-binding HRI97_03285 PF09382 RQC domain HRI97_03290 PF01116 Fructose-bisphosphate aldolase class-II HRI97_03295 PF00294 pfkB family carbohydrate kinase HRI97_03310 PF08501 Shikimate dehydrogenase substrate binding domain HRI97_03310 PF01488 Shikimate / quinate 5-dehydrogenase HRI97_03310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HRI97_03315 PF00849 RNA pseudouridylate synthase HRI97_03340 PF02447 GntP family permease HRI97_03355 PF01501 Glycosyl transferase family 8 HRI97_03390 PF00679 Elongation factor G C-terminus HRI97_03390 PF14492 Elongation Factor G, domain II HRI97_03390 PF03764 Elongation factor G, domain IV HRI97_03390 PF00009 Elongation factor Tu GTP binding domain HRI97_03390 PF03144 Elongation factor Tu domain 2 HRI97_03405 PF05593 RHS Repeat HRI97_03415 PF00455 DeoR C terminal sensor domain HRI97_03415 PF08220 DeoR-like helix-turn-helix domain HRI97_03450 PF00294 pfkB family carbohydrate kinase HRI97_03455 PF01791 DeoC/LacD family aldolase HRI97_03460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HRI97_03460 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HRI97_03465 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HRI97_03475 PF01121 Dephospho-CoA kinase HRI97_03480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HRI97_03480 PF00476 DNA polymerase family A HRI97_03480 PF01612 3'-5' exonuclease HRI97_03480 PF01367 5'-3' exonuclease, C-terminal SAM fold HRI97_03485 PF00596 Class II Aldolase and Adducin N-terminal domain HRI97_03495 PF12833 Helix-turn-helix domain HRI97_03495 PF02311 AraC-like ligand binding domain HRI97_03500 PF01261 Xylose isomerase-like TIM barrel HRI97_03505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRI97_03505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRI97_03510 PF13407 Periplasmic binding protein domain HRI97_03515 PF02653 Branched-chain amino acid transport system / permease component HRI97_03520 PF02653 Branched-chain amino acid transport system / permease component HRI97_03525 PF00005 ABC transporter HRI97_03530 PF06134 L-rhamnose isomerase (RhaA) HRI97_03550 PF03632 Glycosyl hydrolase family 65 central catalytic domain HRI97_03550 PF03633 Glycosyl hydrolase family 65, C-terminal domain HRI97_03550 PF03636 Glycosyl hydrolase family 65, N-terminal domain HRI97_03555 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_03560 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_03565 PF01547 Bacterial extracellular solute-binding protein HRI97_03570 PF00356 Bacterial regulatory proteins, lacI family HRI97_03585 PF00356 Bacterial regulatory proteins, lacI family HRI97_03590 PF01547 Bacterial extracellular solute-binding protein HRI97_03595 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_03600 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_03615 PF10672 S-adenosylmethionine-dependent methyltransferase HRI97_03615 PF17785 PUA-like domain HRI97_03645 PF03309 Type III pantothenate kinase HRI97_03650 PF13393 Histidyl-tRNA synthetase HRI97_03655 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_03670 PF01799 [2Fe-2S] binding domain HRI97_03670 PF00111 2Fe-2S iron-sulfur cluster binding domain HRI97_03680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRI97_03685 PF02719 Polysaccharide biosynthesis protein HRI97_03700 PF01063 Amino-transferase class IV HRI97_03705 PF01687 Riboflavin kinase HRI97_03705 PF06574 FAD synthetase HRI97_03710 PF00312 Ribosomal protein S15 HRI97_03715 PF00013 KH domain HRI97_03715 PF01138 3' exoribonuclease family, domain 1 HRI97_03715 PF03725 3' exoribonuclease family, domain 2 HRI97_03715 PF00575 S1 RNA binding domain HRI97_03715 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HRI97_03720 PF00692 dUTPase HRI97_03735 PF01702 Queuine tRNA-ribosyltransferase HRI97_03750 PF00270 DEAD/DEAH box helicase HRI97_03750 PF00271 Helicase conserved C-terminal domain HRI97_03750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HRI97_03750 PF04408 Helicase associated domain (HA2) HRI97_03760 PF01515 Phosphate acetyl/butaryl transferase HRI97_03775 PF04055 Radical SAM superfamily HRI97_03775 PF00919 Uncharacterized protein family UPF0004 HRI97_03780 PF00986 DNA gyrase B subunit, carboxyl terminus HRI97_03780 PF00204 DNA gyrase B HRI97_03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_03780 PF01751 Toprim domain HRI97_03800 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_03805 PF00551 Formyl transferase HRI97_03810 PF02769 AIR synthase related protein, C-terminal domain HRI97_03810 PF00586 AIR synthase related protein, N-terminal domain HRI97_03815 PF00156 Phosphoribosyl transferase domain HRI97_03820 PF01259 SAICAR synthetase HRI97_03825 PF00731 AIR carboxylase HRI97_03830 PF00342 Phosphoglucose isomerase HRI97_03855 PF01476 LysM domain HRI97_03855 PF05257 CHAP domain HRI97_03860 PF00691 OmpA family HRI97_03865 PF00005 ABC transporter HRI97_03875 PF03358 NADPH-dependent FMN reductase HRI97_03875 PF04205 FMN-binding domain HRI97_03875 PF00890 FAD binding domain HRI97_03905 PF01204 Trehalase HRI97_03915 PF01740 STAS domain HRI97_03950 PF08676 MutL C terminal dimerisation domain HRI97_03950 PF01119 DNA mismatch repair protein, C-terminal domain HRI97_03955 PF02609 Exonuclease VII small subunit HRI97_03960 PF02601 Exonuclease VII, large subunit HRI97_03960 PF13742 OB-fold nucleic acid binding domain HRI97_04015 PF04101 Glycosyltransferase family 28 C-terminal domain HRI97_04015 PF03033 Glycosyltransferase family 28 N-terminal domain HRI97_04025 PF12169 DNA polymerase III subunits gamma and tau domain III HRI97_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_04030 PF00512 His Kinase A (phospho-acceptor) domain HRI97_04030 PF00989 PAS fold HRI97_04035 PF02954 Bacterial regulatory protein, Fis family HRI97_04035 PF00072 Response regulator receiver domain HRI97_04035 PF00158 Sigma-54 interaction domain HRI97_04040 PF00684 DnaJ central domain HRI97_04040 PF01556 DnaJ C terminal domain HRI97_04040 PF00226 DnaJ domain HRI97_04045 PF00483 Nucleotidyl transferase HRI97_04050 PF00460 Flagella basal body rod protein HRI97_04050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRI97_04055 PF00460 Flagella basal body rod protein HRI97_04055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRI97_04060 PF10135 Rod binding protein HRI97_04065 PF02875 Mur ligase family, glutamate ligase domain HRI97_04065 PF01225 Mur ligase family, catalytic domain HRI97_04065 PF08245 Mur ligase middle domain HRI97_04070 PF08340 Domain of unknown function (DUF1732) HRI97_04070 PF03755 YicC-like family, N-terminal region HRI97_04080 PF10576 Iron-sulfur binding domain of endonuclease III HRI97_04080 PF00633 Helix-hairpin-helix motif HRI97_04080 PF00730 HhH-GPD superfamily base excision DNA repair protein HRI97_04095 PF03477 ATP cone domain HRI97_04095 PF13597 Anaerobic ribonucleoside-triphosphate reductase HRI97_04100 PF03881 Fructosamine kinase HRI97_04115 PF02151 UvrB/uvrC motif HRI97_04115 PF12344 Ultra-violet resistance protein B HRI97_04115 PF00271 Helicase conserved C-terminal domain HRI97_04115 PF04851 Type III restriction enzyme, res subunit HRI97_04115 PF17757 UvrB interaction domain HRI97_04130 PF00579 tRNA synthetases class I (W and Y) HRI97_04140 PF00849 RNA pseudouridylate synthase HRI97_04140 PF01479 S4 domain HRI97_04150 PF05524 PEP-utilising enzyme, N-terminal HRI97_04150 PF00391 PEP-utilising enzyme, mobile domain HRI97_04150 PF02896 PEP-utilising enzyme, TIM barrel domain HRI97_04150 PF00381 PTS HPr component phosphorylation site HRI97_04150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRI97_04155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRI97_04170 PF03180 NLPA lipoprotein HRI97_04180 PF04343 Protein of unknown function, DUF488 HRI97_04190 PF14821 Threonine synthase N terminus HRI97_04190 PF00291 Pyridoxal-phosphate dependent enzyme HRI97_04200 PF00842 Alanine racemase, C-terminal domain HRI97_04200 PF01168 Alanine racemase, N-terminal domain HRI97_04215 PF02875 Mur ligase family, glutamate ligase domain HRI97_04215 PF08245 Mur ligase middle domain HRI97_04220 PF00535 Glycosyl transferase family 2 HRI97_04235 PF00330 Aconitase family (aconitate hydratase) HRI97_04245 PF00596 Class II Aldolase and Adducin N-terminal domain HRI97_04250 PF01008 Initiation factor 2 subunit family HRI97_04255 PF01636 Phosphotransferase enzyme family HRI97_04265 PF02562 PhoH-like protein HRI97_04270 PF01966 HD domain HRI97_04270 PF07697 7TM-HD extracellular HRI97_04270 PF07698 7TM receptor with intracellular HD hydrolase HRI97_04275 PF02130 Uncharacterized protein family UPF0054 HRI97_04280 PF00571 CBS domain HRI97_04280 PF03471 Transporter associated domain HRI97_04310 PF00448 SRP54-type protein, GTPase domain HRI97_04310 PF02881 SRP54-type protein, helical bundle domain HRI97_04320 PF02687 FtsX-like permease family HRI97_04320 PF12704 MacB-like periplasmic core domain HRI97_04325 PF00005 ABC transporter HRI97_04340 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HRI97_04345 PF00004 ATPase family associated with various cellular activities (AAA) HRI97_04345 PF07724 AAA domain (Cdc48 subfamily) HRI97_04345 PF17871 AAA lid domain HRI97_04345 PF02861 Clp amino terminal domain, pathogenicity island component HRI97_04345 PF10431 C-terminal, D2-small domain, of ClpB protein HRI97_04360 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_04365 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_04370 PF02929 Beta galactosidase small chain HRI97_04370 PF00703 Glycosyl hydrolases family 2 HRI97_04370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HRI97_04370 PF02837 Glycosyl hydrolases family 2, sugar binding domain HRI97_04375 PF07470 Glycosyl Hydrolase Family 88 HRI97_04385 PF00156 Phosphoribosyl transferase domain HRI97_04395 PF01351 Ribonuclease HII HRI97_04405 PF00266 Aminotransferase class-V HRI97_04410 PF01761 3-dehydroquinate synthase HRI97_04420 PF02223 Thymidylate kinase HRI97_04430 PF01103 Surface antigen HRI97_04430 PF07244 Surface antigen variable number repeat HRI97_04440 PF01624 MutS domain I HRI97_04440 PF05188 MutS domain II HRI97_04440 PF05192 MutS domain III HRI97_04440 PF05190 MutS family domain IV HRI97_04440 PF00488 MutS domain V HRI97_04450 PF02875 Mur ligase family, glutamate ligase domain HRI97_04450 PF08245 Mur ligase middle domain HRI97_04455 PF08021 Siderophore-interacting FAD-binding domain HRI97_04455 PF00005 ABC transporter HRI97_04455 PF00664 ABC transporter transmembrane region HRI97_04455 PF04954 Siderophore-interacting protein HRI97_04460 PF00005 ABC transporter HRI97_04460 PF00664 ABC transporter transmembrane region HRI97_04465 PF01225 Mur ligase family, catalytic domain HRI97_04465 PF02875 Mur ligase family, glutamate ligase domain HRI97_04465 PF08245 Mur ligase middle domain HRI97_04470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRI97_04470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRI97_04475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRI97_04475 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HRI97_04485 PF00977 Histidine biosynthesis protein HRI97_04490 PF00117 Glutamine amidotransferase class-I HRI97_04495 PF00834 Ribulose-phosphate 3 epimerase family HRI97_04515 PF00154 recA bacterial DNA recombination protein HRI97_04520 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HRI97_04530 PF00501 AMP-binding enzyme HRI97_04550 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_04555 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_04565 PF01636 Phosphotransferase enzyme family HRI97_04575 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_04580 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_04590 PF00750 tRNA synthetases class I (R) HRI97_04590 PF05746 DALR anticodon binding domain HRI97_04590 PF03485 Arginyl tRNA synthetase N terminal domain HRI97_04595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HRI97_04595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRI97_04610 PF08502 LeuA allosteric (dimerisation) domain HRI97_04610 PF00682 HMGL-like HRI97_04615 PF09334 tRNA synthetases class I (M) HRI97_04615 PF01588 Putative tRNA binding domain HRI97_04625 PF00753 Metallo-beta-lactamase superfamily HRI97_04625 PF12706 Beta-lactamase superfamily domain HRI97_04640 PF01418 Helix-turn-helix domain, rpiR family HRI97_04640 PF01380 SIS domain HRI97_04645 PF00294 pfkB family carbohydrate kinase HRI97_04655 PF00005 ABC transporter HRI97_04655 PF08402 TOBE domain HRI97_04665 PF01116 Fructose-bisphosphate aldolase class-II HRI97_04670 PF02779 Transketolase, pyrimidine binding domain HRI97_04670 PF02780 Transketolase, C-terminal domain HRI97_04670 PF00456 Transketolase, thiamine diphosphate binding domain HRI97_04675 PF02779 Transketolase, pyrimidine binding domain HRI97_04675 PF02780 Transketolase, C-terminal domain HRI97_04680 PF04205 FMN-binding domain HRI97_04680 PF00890 FAD binding domain HRI97_04685 PF08279 HTH domain HRI97_04685 PF05043 Mga helix-turn-helix domain HRI97_04685 PF00874 PRD domain HRI97_04685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRI97_04685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRI97_04690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRI97_04695 PF00381 PTS HPr component phosphorylation site HRI97_04700 PF02896 PEP-utilising enzyme, TIM barrel domain HRI97_04700 PF00391 PEP-utilising enzyme, mobile domain HRI97_04700 PF05524 PEP-utilising enzyme, N-terminal HRI97_04705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRI97_04710 PF03611 PTS system sugar-specific permease component HRI97_04715 PF00456 Transketolase, thiamine diphosphate binding domain HRI97_04720 PF02780 Transketolase, C-terminal domain HRI97_04720 PF02779 Transketolase, pyrimidine binding domain HRI97_04730 PF01541 GIY-YIG catalytic domain HRI97_04730 PF02151 UvrB/uvrC motif HRI97_04730 PF08459 UvrC Helix-hairpin-helix N-terminal HRI97_04745 PF00557 Metallopeptidase family M24 HRI97_04745 PF01321 Creatinase/Prolidase N-terminal domain HRI97_04750 PF02653 Branched-chain amino acid transport system / permease component HRI97_04760 PF00005 ABC transporter HRI97_04765 PF02608 ABC transporter substrate-binding protein PnrA-like HRI97_04780 PF00224 Pyruvate kinase, barrel domain HRI97_04780 PF02887 Pyruvate kinase, alpha/beta domain HRI97_04780 PF00391 PEP-utilising enzyme, mobile domain HRI97_04830 PF01934 Protein of unknown function DUF86 HRI97_04855 PF00132 Bacterial transferase hexapeptide (six repeats) HRI97_04885 PF00589 Phage integrase family HRI97_04885 PF13495 Phage integrase, N-terminal SAM-like domain HRI97_04890 PF01842 ACT domain HRI97_04890 PF13840 ACT domain HRI97_04890 PF00742 Homoserine dehydrogenase HRI97_04890 PF03447 Homoserine dehydrogenase, NAD binding domain HRI97_04890 PF00696 Amino acid kinase family HRI97_04895 PF18152 DAHP synthase ferredoxin-like domain HRI97_04895 PF00793 DAHP synthetase I family HRI97_04900 PF10369 Small subunit of acetolactate synthase HRI97_04905 PF02075 Crossover junction endodeoxyribonuclease RuvC HRI97_04910 PF01330 RuvA N terminal domain HRI97_04915 PF17864 RuvB AAA lid domain HRI97_04915 PF05496 Holliday junction DNA helicase RuvB P-loop domain HRI97_04915 PF05491 RuvB C-terminal winged helix domain HRI97_04920 PF02547 Queuosine biosynthesis protein HRI97_04925 PF08544 GHMP kinases C terminal HRI97_04925 PF00288 GHMP kinases N terminal domain HRI97_04930 PF04026 SpoVG HRI97_04940 PF01386 Ribosomal L25p family HRI97_04940 PF14693 Ribosomal protein TL5, C-terminal domain HRI97_04945 PF01171 PP-loop family HRI97_04955 PF17820 PDZ domain HRI97_04955 PF13180 PDZ domain HRI97_04960 PF00679 Elongation factor G C-terminus HRI97_04960 PF06421 GTP-binding protein LepA C-terminus HRI97_04960 PF03144 Elongation factor Tu domain 2 HRI97_04960 PF00009 Elongation factor Tu GTP binding domain HRI97_04960 PF14492 Elongation Factor G, domain II HRI97_04965 PF02540 NAD synthase HRI97_04965 PF00958 GMP synthase C terminal domain HRI97_04965 PF00117 Glutamine amidotransferase class-I HRI97_04970 PF09383 NIL domain HRI97_04970 PF00005 ABC transporter HRI97_04980 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_04985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRI97_04995 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_05000 PF06418 CTP synthase N-terminus HRI97_05000 PF00117 Glutamine amidotransferase class-I HRI97_05010 PF01336 OB-fold nucleic acid binding domain HRI97_05010 PF00152 tRNA synthetases class II (D, K and N) HRI97_05015 PF05683 Fumarase C-terminus HRI97_05020 PF05681 Fumarate hydratase (Fumerase) HRI97_05025 PF03600 Citrate transporter HRI97_05025 PF02080 TrkA-C domain HRI97_05030 PF00392 Bacterial regulatory proteins, gntR family HRI97_05030 PF07729 FCD domain HRI97_05035 PF00392 Bacterial regulatory proteins, gntR family HRI97_05040 PF00285 Citrate synthase, C-terminal domain HRI97_05045 PF00849 RNA pseudouridylate synthase HRI97_05045 PF01479 S4 domain HRI97_05075 PF01268 Formate--tetrahydrofolate ligase HRI97_05085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HRI97_05105 PF07195 Flagellar hook-associated protein 2 C-terminus HRI97_05105 PF02465 Flagellar hook-associated protein 2 N-terminus HRI97_05115 PF00700 Bacterial flagellin C-terminal helical region HRI97_05115 PF00669 Bacterial flagellin N-terminal helical region HRI97_05120 PF00669 Bacterial flagellin N-terminal helical region HRI97_05120 PF00700 Bacterial flagellin C-terminal helical region HRI97_05125 PF01725 Ham1 family HRI97_05135 PF00378 Enoyl-CoA hydratase/isomerase HRI97_05135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRI97_05135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRI97_05150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRI97_05150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRI97_05175 PF03477 ATP cone domain HRI97_05180 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_05190 PF00005 ABC transporter HRI97_05195 PF02632 BioY family HRI97_05205 PF11953 Domain of unknown function (DUF3470) HRI97_05205 PF12838 4Fe-4S dicluster domain HRI97_05245 PF03237 Terminase-like family HRI97_05255 PF01555 DNA methylase HRI97_05325 PF13401 AAA domain HRI97_05325 PF01471 Putative peptidoglycan binding domain HRI97_05355 PF10124 Mu-like prophage major head subunit gpT HRI97_05450 PF00860 Permease family HRI97_05455 PF07411 Domain of unknown function (DUF1508) HRI97_05460 PF03949 Malic enzyme, NAD binding domain HRI97_05460 PF00390 Malic enzyme, N-terminal domain HRI97_05470 PF00795 Carbon-nitrogen hydrolase HRI97_05475 PF10509 Galactokinase galactose-binding signature HRI97_05475 PF08544 GHMP kinases C terminal HRI97_05480 PF01975 Survival protein SurE HRI97_05500 PF08241 Methyltransferase domain HRI97_05505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRI97_05510 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HRI97_05540 PF02390 Putative methyltransferase HRI97_05545 PF00533 BRCA1 C Terminus (BRCT) domain HRI97_05545 PF01653 NAD-dependent DNA ligase adenylation domain HRI97_05545 PF03120 NAD-dependent DNA ligase OB-fold domain HRI97_05555 PF01551 Peptidase family M23 HRI97_05555 PF08460 Bacterial SH3 domain HRI97_05560 PF02272 DHHA1 domain HRI97_05560 PF17768 RecJ OB domain HRI97_05560 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HRI97_05560 PF01368 DHH family HRI97_05565 PF02885 Glycosyl transferase family, helical bundle domain HRI97_05565 PF00591 Glycosyl transferase family, a/b domain HRI97_05565 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HRI97_05600 PF08264 Anticodon-binding domain of tRNA HRI97_05600 PF00133 tRNA synthetases class I (I, L, M and V) HRI97_05625 PF00005 ABC transporter HRI97_05625 PF00664 ABC transporter transmembrane region HRI97_05630 PF00535 Glycosyl transferase family 2 HRI97_05635 PF13439 Glycosyltransferase Family 4 HRI97_05635 PF00534 Glycosyl transferases group 1 HRI97_05645 PF13580 SIS domain HRI97_05650 PF00534 Glycosyl transferases group 1 HRI97_05650 PF13439 Glycosyltransferase Family 4 HRI97_05655 PF00266 Aminotransferase class-V HRI97_05660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRI97_05660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRI97_05690 PF02096 60Kd inner membrane protein HRI97_05695 PF00884 Sulfatase HRI97_05700 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_05705 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_05720 PF13416 Bacterial extracellular solute-binding protein HRI97_05725 PF04321 RmlD substrate binding domain HRI97_05740 PF00155 Aminotransferase class I and II HRI97_05745 PF08323 Starch synthase catalytic domain HRI97_05745 PF00534 Glycosyl transferases group 1 HRI97_05765 PF17820 PDZ domain HRI97_05765 PF02163 Peptidase family M50 HRI97_05770 PF13288 DXP reductoisomerase C-terminal domain HRI97_05770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HRI97_05770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HRI97_05780 PF01255 Putative undecaprenyl diphosphate synthase HRI97_05785 PF01765 Ribosome recycling factor HRI97_05790 PF00889 Elongation factor TS HRI97_05795 PF00318 Ribosomal protein S2 HRI97_05800 PF02545 Maf-like protein HRI97_05825 PF01467 Cytidylyltransferase-like HRI97_05830 PF01783 Ribosomal L32p protein family HRI97_05835 PF00550 Phosphopantetheine attachment site HRI97_05840 PF00035 Double-stranded RNA binding motif HRI97_05840 PF14622 Ribonuclease-III-like HRI97_05845 PF00211 Adenylate and Guanylate cyclase catalytic domain HRI97_05845 PF00072 Response regulator receiver domain HRI97_05860 PF00890 FAD binding domain HRI97_05860 PF02910 Fumarate reductase flavoprotein C-term HRI97_05870 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HRI97_05870 PF00175 Oxidoreductase NAD-binding domain HRI97_05890 PF01593 Flavin containing amine oxidoreductase HRI97_05905 PF10415 Fumarase C C-terminus HRI97_05905 PF00206 Lyase HRI97_05910 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HRI97_05910 PF00056 lactate/malate dehydrogenase, NAD binding domain HRI97_05955 PF05958 tRNA (Uracil-5-)-methyltransferase HRI97_05980 PF12627 Probable RNA and SrmB- binding site of polymerase A HRI97_05980 PF12626 Polymerase A arginine-rich C-terminus HRI97_05980 PF01743 Poly A polymerase head domain HRI97_05990 PF01479 S4 domain HRI97_05990 PF00849 RNA pseudouridylate synthase HRI97_05995 PF00579 tRNA synthetases class I (W and Y) HRI97_06000 PF03372 Endonuclease/Exonuclease/phosphatase family HRI97_06005 PF03358 NADPH-dependent FMN reductase HRI97_06005 PF04205 FMN-binding domain HRI97_06005 PF00890 FAD binding domain HRI97_06015 PF01743 Poly A polymerase head domain HRI97_06015 PF12627 Probable RNA and SrmB- binding site of polymerase A HRI97_06015 PF13735 tRNA nucleotidyltransferase domain 2 putative HRI97_06070 PF08275 DNA primase catalytic core, N-terminal domain HRI97_06070 PF01807 CHC2 zinc finger HRI97_06075 PF04545 Sigma-70, region 4 HRI97_06075 PF04542 Sigma-70 region 2 HRI97_06075 PF04539 Sigma-70 region 3 HRI97_06075 PF03979 Sigma-70 factor, region 1.1 HRI97_06075 PF00140 Sigma-70 factor, region 1.2 HRI97_06110 PF00905 Penicillin binding protein transpeptidase domain HRI97_06110 PF03717 Penicillin-binding Protein dimerisation domain HRI97_06115 PF01098 Cell cycle protein HRI97_06125 PF08544 GHMP kinases C terminal HRI97_06125 PF00288 GHMP kinases N terminal domain HRI97_06135 PF00270 DEAD/DEAH box helicase HRI97_06135 PF03461 TRCF domain HRI97_06135 PF17757 UvrB interaction domain HRI97_06135 PF00271 Helicase conserved C-terminal domain HRI97_06135 PF02559 CarD-like/TRCF domain HRI97_06160 PF05257 CHAP domain HRI97_06160 PF01476 LysM domain HRI97_06175 PF02463 RecF/RecN/SMC N terminal domain HRI97_06180 PF01513 ATP-NAD kinase HRI97_06185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRI97_06190 PF01584 CheW-like domain HRI97_06195 PF00156 Phosphoribosyl transferase domain HRI97_06200 PF02446 4-alpha-glucanotransferase HRI97_06210 PF00005 ABC transporter HRI97_06210 PF08402 TOBE domain HRI97_06215 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_06225 PF03796 DnaB-like helicase C terminal domain HRI97_06225 PF00772 DnaB-like helicase N terminal domain HRI97_06230 PF03948 Ribosomal protein L9, C-terminal domain HRI97_06230 PF01281 Ribosomal protein L9, N-terminal domain HRI97_06235 PF01084 Ribosomal protein S18 HRI97_06240 PF00436 Single-strand binding protein family HRI97_06245 PF01250 Ribosomal protein S6 HRI97_06270 PF04055 Radical SAM superfamily HRI97_06280 PF00330 Aconitase family (aconitate hydratase) HRI97_06285 PF00694 Aconitase C-terminal domain HRI97_06315 PF01337 Barstar (barnase inhibitor) HRI97_06385 PF02661 Fic/DOC family HRI97_06390 PF00849 RNA pseudouridylate synthase HRI97_06390 PF01479 S4 domain HRI97_06395 PF00849 RNA pseudouridylate synthase HRI97_06405 PF01168 Alanine racemase, N-terminal domain HRI97_06410 PF00398 Ribosomal RNA adenine dimethylase HRI97_06415 PF03772 Competence protein HRI97_06415 PF13567 Domain of unknown function (DUF4131) HRI97_06415 PF00753 Metallo-beta-lactamase superfamily HRI97_06435 PF02397 Bacterial sugar transferase HRI97_06490 PF01509 TruB family pseudouridylate synthase (N terminal domain) HRI97_06495 PF02033 Ribosome-binding factor A HRI97_06500 PF00009 Elongation factor Tu GTP binding domain HRI97_06500 PF11987 Translation-initiation factor 2 HRI97_06500 PF04760 Translation initiation factor IF-2, N-terminal region HRI97_06505 PF00575 S1 RNA binding domain HRI97_06505 PF08529 NusA N-terminal domain HRI97_06505 PF13184 NusA-like KH domain HRI97_06510 PF02576 RimP N-terminal domain HRI97_06510 PF17384 RimP C-terminal SH3 domain HRI97_06520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRI97_06520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRI97_06520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRI97_06520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRI97_06525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRI97_06525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRI97_06525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRI97_06525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRI97_06530 PF00929 Exonuclease HRI97_06535 PF02599 Global regulator protein family HRI97_06540 PF02623 FliW protein HRI97_06545 PF00700 Bacterial flagellin C-terminal helical region HRI97_06545 PF00669 Bacterial flagellin N-terminal helical region HRI97_06550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRI97_06550 PF07196 Flagellin hook IN motif HRI97_06595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRI97_06595 PF05698 Bacterial trigger factor protein (TF) C-terminus HRI97_06595 PF05697 Bacterial trigger factor protein (TF) HRI97_06600 PF00574 Clp protease HRI97_06605 PF07724 AAA domain (Cdc48 subfamily) HRI97_06605 PF10431 C-terminal, D2-small domain, of ClpB protein HRI97_06605 PF06689 ClpX C4-type zinc finger HRI97_06625 PF00534 Glycosyl transferases group 1 HRI97_06625 PF13439 Glycosyltransferase Family 4 HRI97_06630 PF00270 DEAD/DEAH box helicase HRI97_06630 PF00271 Helicase conserved C-terminal domain HRI97_06635 PF06470 SMC proteins Flexible Hinge Domain HRI97_06635 PF02463 RecF/RecN/SMC N terminal domain HRI97_06645 PF13525 Outer membrane lipoprotein HRI97_06655 PF02403 Seryl-tRNA synthetase N-terminal domain HRI97_06655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRI97_06660 PF01594 AI-2E family transporter HRI97_06675 PF00005 ABC transporter HRI97_06685 PF01048 Phosphorylase superfamily HRI97_06710 PF02417 Chromate transporter HRI97_06725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HRI97_06730 PF01979 Amidohydrolase family HRI97_06745 PF00158 Sigma-54 interaction domain HRI97_06745 PF00072 Response regulator receiver domain HRI97_06745 PF02954 Bacterial regulatory protein, Fis family HRI97_06750 PF00575 S1 RNA binding domain HRI97_06755 PF00849 RNA pseudouridylate synthase HRI97_06755 PF01479 S4 domain HRI97_06760 PF04079 Segregation and condensation complex subunit ScpB HRI97_06765 PF02616 Segregation and condensation protein ScpA HRI97_06770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HRI97_06780 PF16811 TRAP transporter T-component HRI97_06840 PF01381 Helix-turn-helix HRI97_06845 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HRI97_06850 PF09382 RQC domain HRI97_06850 PF16124 RecQ zinc-binding HRI97_06850 PF00570 HRDC domain HRI97_06850 PF00271 Helicase conserved C-terminal domain HRI97_06850 PF00270 DEAD/DEAH box helicase HRI97_06860 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_06865 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_06870 PF11975 Family 4 glycosyl hydrolase C-terminal domain HRI97_06870 PF02056 Family 4 glycosyl hydrolase HRI97_06875 PF00356 Bacterial regulatory proteins, lacI family HRI97_06885 PF01497 Periplasmic binding protein HRI97_06890 PF00005 ABC transporter HRI97_06895 PF01032 FecCD transport family HRI97_06915 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family HRI97_06925 PF00005 ABC transporter HRI97_06930 PF01458 Uncharacterized protein family (UPF0051) HRI97_06935 PF01458 Uncharacterized protein family (UPF0051) HRI97_06940 PF00266 Aminotransferase class-V HRI97_06945 PF01592 NifU-like N terminal domain HRI97_06960 PF16745 RsgA N-terminal domain HRI97_06960 PF03193 RsgA GTPase HRI97_06965 PF00488 MutS domain V HRI97_06965 PF01713 Smr domain HRI97_06970 PF02863 Arginine repressor, C-terminal domain HRI97_06970 PF01316 Arginine repressor, DNA binding domain HRI97_06990 PF01709 Transcriptional regulator HRI97_06995 PF03102 NeuB family HRI97_06995 PF08666 SAF domain HRI97_07005 PF07517 SecA DEAD-like domain HRI97_07005 PF01043 SecA preprotein cross-linking domain HRI97_07005 PF07516 SecA Wing and Scaffold domain HRI97_07005 PF02810 SEC-C motif HRI97_07030 PF01475 Ferric uptake regulator family HRI97_07045 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRI97_07065 PF00005 ABC transporter HRI97_07065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRI97_07070 PF00005 ABC transporter HRI97_07070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRI97_07075 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_07080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRI97_07085 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HRI97_07090 PF00364 Biotin-requiring enzyme HRI97_07090 PF00682 HMGL-like HRI97_07090 PF02436 Conserved carboxylase domain HRI97_07105 PF00356 Bacterial regulatory proteins, lacI family HRI97_07110 PF00005 ABC transporter HRI97_07115 PF02653 Branched-chain amino acid transport system / permease component HRI97_07120 PF00834 Ribulose-phosphate 3 epimerase family HRI97_07125 PF00480 ROK family HRI97_07135 PF13407 Periplasmic binding protein domain HRI97_07140 PF02502 Ribose/Galactose Isomerase HRI97_07145 PF01791 DeoC/LacD family aldolase HRI97_07150 PF13187 4Fe-4S dicluster domain HRI97_07170 PF00912 Transglycosylase HRI97_07170 PF00905 Penicillin binding protein transpeptidase domain HRI97_07185 PF01008 Initiation factor 2 subunit family HRI97_07190 PF01636 Phosphotransferase enzyme family HRI97_07195 PF02653 Branched-chain amino acid transport system / permease component HRI97_07200 PF00005 ABC transporter HRI97_07210 PF05025 RbsD / FucU transport protein family HRI97_07220 PF00356 Bacterial regulatory proteins, lacI family HRI97_07260 PF00563 EAL domain HRI97_07260 PF01590 GAF domain HRI97_07260 PF00990 Diguanylate cyclase, GGDEF domain HRI97_07260 PF00360 Phytochrome region HRI97_07270 PF01973 Protein of unknown function DUF115 HRI97_07280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HRI97_07280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HRI97_07280 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HRI97_07290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRI97_07290 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRI97_07300 PF04620 Flagellar filament outer layer protein Flaa HRI97_07310 PF01520 N-acetylmuramoyl-L-alanine amidase HRI97_07315 PF02222 ATP-grasp domain HRI97_07320 PF02348 Cytidylyltransferase HRI97_07330 PF13186 Iron-sulfur cluster-binding domain HRI97_07350 PF16123 Hydroxyacylglutathione hydrolase C-terminus HRI97_07350 PF00753 Metallo-beta-lactamase superfamily HRI97_07355 PF00121 Triosephosphate isomerase HRI97_07360 PF00162 Phosphoglycerate kinase HRI97_07385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRI97_07385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRI97_07395 PF03129 Anticodon binding domain HRI97_07395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRI97_07395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRI97_07395 PF02824 TGS domain HRI97_07405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRI97_07405 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRI97_07405 PF18269 T3SS EscN ATPase C-terminal domain HRI97_07410 PF02108 Flagellar assembly protein FliH HRI97_07415 PF14842 FliG N-terminal domain HRI97_07415 PF14841 FliG middle domain HRI97_07415 PF01706 FliG C-terminal domain HRI97_07420 PF01514 Secretory protein of YscJ/FliF family HRI97_07420 PF08345 Flagellar M-ring protein C-terminal HRI97_07430 PF00460 Flagella basal body rod protein HRI97_07430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HRI97_07440 PF00004 ATPase family associated with various cellular activities (AAA) HRI97_07440 PF07724 AAA domain (Cdc48 subfamily) HRI97_07445 PF00227 Proteasome subunit HRI97_07450 PF00589 Phage integrase family HRI97_07450 PF02899 Phage integrase, N-terminal SAM-like domain HRI97_07455 PF01751 Toprim domain HRI97_07455 PF01396 Topoisomerase DNA binding C4 zinc finger HRI97_07455 PF01131 DNA topoisomerase HRI97_07460 PF17782 DprA winged helix domain HRI97_07460 PF02481 DNA recombination-mediator protein A HRI97_07470 PF02899 Phage integrase, N-terminal SAM-like domain HRI97_07470 PF00589 Phage integrase family HRI97_07475 PF12327 FtsZ family, C-terminal domain HRI97_07475 PF00091 Tubulin/FtsZ family, GTPase domain HRI97_07480 PF02491 SHS2 domain inserted in FTSA HRI97_07485 PF03799 Cell division protein FtsQ HRI97_07485 PF08478 POTRA domain, FtsQ-type HRI97_07490 PF01098 Cell cycle protein HRI97_07495 PF01225 Mur ligase family, catalytic domain HRI97_07495 PF08245 Mur ligase middle domain HRI97_07495 PF02875 Mur ligase family, glutamate ligase domain HRI97_07505 PF01795 MraW methylase family HRI97_07510 PF02381 MraZ protein, putative antitoxin-like HRI97_07520 PF04620 Flagellar filament outer layer protein Flaa HRI97_07550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRI97_07555 PF04463 Protein of unknown function (DUF523) HRI97_07590 PF06826 Predicted Permease Membrane Region HRI97_07595 PF00155 Aminotransferase class I and II HRI97_07605 PF01661 Macro domain HRI97_07610 PF01116 Fructose-bisphosphate aldolase class-II HRI97_07620 PF00595 PDZ domain HRI97_07630 PF00005 ABC transporter HRI97_07630 PF00005 ABC transporter HRI97_07630 PF17755 UvrA DNA-binding domain HRI97_07630 PF17760 UvrA interaction domain HRI97_07630 PF17760 UvrA interaction domain HRI97_07630 PF17755 UvrA DNA-binding domain HRI97_07635 PF01209 ubiE/COQ5 methyltransferase family HRI97_07665 PF00557 Metallopeptidase family M24 HRI97_07670 PF00226 DnaJ domain HRI97_07670 PF01556 DnaJ C terminal domain HRI97_07670 PF00684 DnaJ central domain HRI97_07680 PF01813 ATP synthase subunit D HRI97_07685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRI97_07685 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRI97_07690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRI97_07690 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRI97_07690 PF16886 ATPsynthase alpha/beta subunit N-term extension HRI97_07700 PF01990 ATP synthase (F/14-kDa) subunit HRI97_07710 PF01496 V-type ATPase 116kDa subunit family HRI97_07725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRI97_07730 PF03840 Preprotein translocase SecG subunit HRI97_07745 PF01555 DNA methylase HRI97_07770 PF00795 Carbon-nitrogen hydrolase HRI97_07770 PF02540 NAD synthase HRI97_07775 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HRI97_07795 PF13407 Periplasmic binding protein domain HRI97_07800 PF02653 Branched-chain amino acid transport system / permease component HRI97_07805 PF00005 ABC transporter HRI97_07810 PF05025 RbsD / FucU transport protein family HRI97_07815 PF00356 Bacterial regulatory proteins, lacI family HRI97_07820 PF00301 Rubredoxin HRI97_07825 PF04260 Protein of unknown function (DUF436) HRI97_07840 PF04551 GcpE protein HRI97_07855 PF01813 ATP synthase subunit D HRI97_07860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRI97_07860 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRI97_07865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRI97_07865 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRI97_07865 PF16886 ATPsynthase alpha/beta subunit N-term extension HRI97_07875 PF01991 ATP synthase (E/31 kDa) subunit HRI97_07880 PF01263 Aldose 1-epimerase HRI97_07900 PF04542 Sigma-70 region 2 HRI97_07900 PF04539 Sigma-70 region 3 HRI97_07900 PF04545 Sigma-70, region 4 HRI97_07910 PF10609 NUBPL iron-transfer P-loop NTPase HRI97_07915 PF00448 SRP54-type protein, GTPase domain HRI97_07920 PF00771 FHIPEP family HRI97_07925 PF01312 FlhB HrpN YscU SpaS Family HRI97_07930 PF01311 Bacterial export proteins, family 1 HRI97_07935 PF01313 Bacterial export proteins, family 3 HRI97_07940 PF00813 FliP family HRI97_07950 PF04509 CheC-like family HRI97_07950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HRI97_07955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HRI97_07955 PF02154 Flagellar motor switch protein FliM HRI97_07960 PF03748 Flagellar basal body-associated protein FliL HRI97_07965 PF13677 Membrane MotB of proton-channel complex MotA/MotB HRI97_07965 PF00691 OmpA family HRI97_07970 PF01618 MotA/TolQ/ExbB proton channel family HRI97_07975 PF06289 Flagellar and Swarming motility proteins HRI97_07980 PF00072 Response regulator receiver domain HRI97_07980 PF00486 Transcriptional regulatory protein, C terminal HRI97_07985 PF00672 HAMP domain HRI97_07985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_07985 PF18698 Histidine kinase sensor domain HRI97_07985 PF00512 His Kinase A (phospho-acceptor) domain HRI97_07990 PF18541 RuvC endonuclease subdomain 3 HRI97_07990 PF13395 HNH endonuclease HRI97_08000 PF09827 CRISPR associated protein Cas2 HRI97_08005 PF06969 HemN C-terminal domain HRI97_08005 PF04055 Radical SAM superfamily HRI97_08015 PF01668 SmpB protein HRI97_08025 PF03960 ArsC family HRI97_08040 PF13651 Adenine-specific methyltransferase EcoRI HRI97_08045 PF13651 Adenine-specific methyltransferase EcoRI HRI97_08050 PF02909 Tetracyclin repressor-like, C-terminal domain HRI97_08050 PF00440 Bacterial regulatory proteins, tetR family HRI97_08055 PF00128 Alpha amylase, catalytic domain HRI97_08055 PF02903 Alpha amylase, N-terminal ig-like domain HRI97_08055 PF16657 Maltogenic Amylase, C-terminal domain HRI97_08060 PF01300 Telomere recombination HRI97_08095 PF13361 UvrD-like helicase C-terminal domain HRI97_08095 PF00580 UvrD/REP helicase N-terminal domain HRI97_08100 PF18693 TRAM domain HRI97_08100 PF00919 Uncharacterized protein family UPF0004 HRI97_08100 PF04055 Radical SAM superfamily HRI97_08115 PF00163 Ribosomal protein S4/S9 N-terminal domain HRI97_08115 PF01479 S4 domain HRI97_08125 PF01791 DeoC/LacD family aldolase HRI97_08130 PF13407 Periplasmic binding protein domain HRI97_08135 PF02653 Branched-chain amino acid transport system / permease component HRI97_08140 PF02653 Branched-chain amino acid transport system / permease component HRI97_08145 PF00005 ABC transporter HRI97_08150 PF04198 Putative sugar-binding domain HRI97_08155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRI97_08155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRI97_08170 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRI97_08170 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRI97_08175 PF01145 SPFH domain / Band 7 family HRI97_08185 PF01979 Amidohydrolase family HRI97_08190 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HRI97_08190 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HRI97_08195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRI97_08195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRI97_08200 PF07055 Enoyl reductase FAD binding domain HRI97_08200 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HRI97_08200 PF12241 Trans-2-enoyl-CoA reductase catalytic region HRI97_08205 PF02801 Beta-ketoacyl synthase, C-terminal domain HRI97_08205 PF00109 Beta-ketoacyl synthase, N-terminal domain HRI97_08210 PF00707 Translation initiation factor IF-3, C-terminal domain HRI97_08210 PF05198 Translation initiation factor IF-3, N-terminal domain HRI97_08215 PF01632 Ribosomal protein L35 HRI97_08220 PF00453 Ribosomal protein L20 HRI97_08235 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HRI97_08240 PF11849 Domain of unknown function (DUF3369) HRI97_08245 PF01029 NusB family HRI97_08245 PF01189 16S rRNA methyltransferase RsmB/F HRI97_08250 PF00933 Glycosyl hydrolase family 3 N terminal domain HRI97_08255 PF00106 short chain dehydrogenase HRI97_08310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HRI97_08310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HRI97_08315 PF02653 Branched-chain amino acid transport system / permease component HRI97_08320 PF00005 ABC transporter HRI97_08325 PF13407 Periplasmic binding protein domain HRI97_08325 PF18610 Periplasmic binding protein domain HRI97_08330 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_08335 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRI97_08340 PF14698 Argininosuccinate lyase C-terminal HRI97_08340 PF00206 Lyase HRI97_08350 PF02568 Thiamine biosynthesis protein (ThiI) HRI97_08350 PF02926 THUMP domain HRI97_08365 PF03167 Uracil DNA glycosylase superfamily HRI97_08370 PF18074 Primosomal protein N C-terminal domain HRI97_08370 PF00270 DEAD/DEAH box helicase HRI97_08370 PF00271 Helicase conserved C-terminal domain HRI97_08370 PF17764 3′ DNA-binding domain (3′BD) HRI97_08370 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HRI97_08375 PF01416 tRNA pseudouridine synthase HRI97_08380 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) HRI97_08385 PF01648 4'-phosphopantetheinyl transferase superfamily HRI97_08395 PF02457 DisA bacterial checkpoint controller nucleotide-binding HRI97_08400 PF00809 Pterin binding enzyme HRI97_08405 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HRI97_08405 PF02780 Transketolase, C-terminal domain HRI97_08405 PF02779 Transketolase, pyrimidine binding domain HRI97_08410 PF01192 RNA polymerase Rpb6 HRI97_08430 PF00596 Class II Aldolase and Adducin N-terminal domain HRI97_08435 PF16325 Peptidase family U32 C-terminal domain HRI97_08435 PF01136 Peptidase family U32 HRI97_08440 PF07859 alpha/beta hydrolase fold HRI97_08445 PF04204 Homoserine O-succinyltransferase HRI97_08455 PF06580 Histidine kinase HRI97_08455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_08460 PF00072 Response regulator receiver domain HRI97_08460 PF12833 Helix-turn-helix domain HRI97_08475 PF01970 Tripartite tricarboxylate transporter TctA family HRI97_08480 PF02308 MgtC family HRI97_08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_08490 PF06580 Histidine kinase HRI97_08495 PF12833 Helix-turn-helix domain HRI97_08495 PF00072 Response regulator receiver domain HRI97_08505 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_08510 PF00005 ABC transporter HRI97_08510 PF08402 TOBE domain HRI97_08515 PF04962 KduI/IolB family HRI97_08525 PF03099 Biotin/lipoate A/B protein ligase family HRI97_08525 PF08279 HTH domain HRI97_08525 PF02237 Biotin protein ligase C terminal domain HRI97_08535 PF07556 Protein of unknown function (DUF1538) HRI97_08540 PF01048 Phosphorylase superfamily HRI97_08550 PF01252 Signal peptidase (SPase) II HRI97_08555 PF01134 Glucose inhibited division protein A HRI97_08555 PF13932 GidA associated domain HRI97_08570 PF00571 CBS domain HRI97_08570 PF01769 Divalent cation transporter HRI97_08570 PF03448 MgtE intracellular N domain HRI97_08580 PF00595 PDZ domain HRI97_08580 PF13180 PDZ domain HRI97_08595 PF01435 Peptidase family M48 HRI97_08595 PF16491 CAAX prenyl protease N-terminal, five membrane helices HRI97_08600 PF00248 Aldo/keto reductase family HRI97_08605 PF00106 short chain dehydrogenase HRI97_08610 PF01545 Cation efflux family HRI97_08610 PF16916 Dimerisation domain of Zinc Transporter HRI97_08620 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family HRI97_08680 PF05191 Adenylate kinase, active site lid HRI97_08685 PF02595 Glycerate kinase family HRI97_08690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HRI97_08690 PF00056 lactate/malate dehydrogenase, NAD binding domain HRI97_08695 PF03023 Lipid II flippase MurJ HRI97_08700 PF02554 Carbon starvation protein CstA HRI97_08710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRI97_08710 PF00205 Thiamine pyrophosphate enzyme, central domain HRI97_08710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRI97_08715 PF00920 Dehydratase family HRI97_08725 PF08240 Alcohol dehydrogenase GroES-like domain HRI97_08725 PF00107 Zinc-binding dehydrogenase HRI97_08735 PF13685 Iron-containing alcohol dehydrogenase HRI97_08740 PF00180 Isocitrate/isopropylmalate dehydrogenase HRI97_08745 PF00682 HMGL-like HRI97_08745 PF08502 LeuA allosteric (dimerisation) domain HRI97_08760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRI97_08770 PF01205 Uncharacterized protein family UPF0029 HRI97_08770 PF09186 Domain of unknown function (DUF1949) HRI97_08775 PF00521 DNA gyrase/topoisomerase IV, subunit A HRI97_08810 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRI97_08810 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRI97_08815 PF00701 Dihydrodipicolinate synthetase family HRI97_08820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRI97_08825 PF00849 RNA pseudouridylate synthase HRI97_08825 PF01479 S4 domain HRI97_08830 PF03590 Aspartate-ammonia ligase HRI97_08835 PF00156 Phosphoribosyl transferase domain HRI97_08840 PF01842 ACT domain HRI97_08840 PF02153 Prephenate dehydrogenase HRI97_08845 PF00793 DAHP synthetase I family HRI97_08845 PF18152 DAHP synthase ferredoxin-like domain HRI97_08850 PF00664 ABC transporter transmembrane region HRI97_08850 PF00005 ABC transporter HRI97_08855 PF00664 ABC transporter transmembrane region HRI97_08855 PF00005 ABC transporter HRI97_08860 PF01921 tRNA synthetases class I (K) HRI97_08865 PF07478 D-ala D-ala ligase C-terminus HRI97_08865 PF01820 D-ala D-ala ligase N-terminus HRI97_08875 PF02401 LytB protein HRI97_08885 PF02355 Protein export membrane protein HRI97_08890 PF02355 Protein export membrane protein HRI97_08895 PF02699 Preprotein translocase subunit HRI97_08925 PF13173 AAA domain HRI97_08925 PF13635 Domain of unknown function (DUF4143) HRI97_08940 PF01026 TatD related DNase HRI97_08960 PF08220 DeoR-like helix-turn-helix domain HRI97_08960 PF00455 DeoR C terminal sensor domain HRI97_08965 PF07005 Sugar-binding N-terminal domain HRI97_08965 PF17042 Nucleotide-binding C-terminal domain HRI97_08970 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HRI97_08975 PF02447 GntP family permease HRI97_08980 PF07687 Peptidase dimerisation domain HRI97_08980 PF01546 Peptidase family M20/M25/M40 HRI97_08985 PF03180 NLPA lipoprotein HRI97_08990 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_08995 PF00005 ABC transporter HRI97_08995 PF09383 NIL domain HRI97_09000 PF00753 Metallo-beta-lactamase superfamily HRI97_09005 PF02447 GntP family permease HRI97_09010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRI97_09010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRI97_09010 PF00205 Thiamine pyrophosphate enzyme, central domain HRI97_09015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRI97_09015 PF02743 Cache domain HRI97_09015 PF00672 HAMP domain HRI97_09020 PF01609 Transposase DDE domain HRI97_09020 PF13808 DDE_Tnp_1-associated HRI97_09035 PF00270 DEAD/DEAH box helicase HRI97_09035 PF00271 Helicase conserved C-terminal domain HRI97_09045 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HRI97_09045 PF02542 YgbB family HRI97_09055 PF13419 Haloacid dehalogenase-like hydrolase HRI97_09070 PF14492 Elongation Factor G, domain II HRI97_09070 PF00679 Elongation factor G C-terminus HRI97_09070 PF03144 Elongation factor Tu domain 2 HRI97_09070 PF00009 Elongation factor Tu GTP binding domain HRI97_09070 PF03764 Elongation factor G, domain IV HRI97_09080 PF01869 BadF/BadG/BcrA/BcrD ATPase family HRI97_09085 PF03063 Prismane/CO dehydrogenase family HRI97_09125 PF00291 Pyridoxal-phosphate dependent enzyme HRI97_09135 PF03553 Na+/H+ antiporter family HRI97_09140 PF00890 FAD binding domain HRI97_09140 PF04205 FMN-binding domain HRI97_09160 PF00005 ABC transporter HRI97_09160 PF17760 UvrA interaction domain HRI97_09160 PF17755 UvrA DNA-binding domain HRI97_09165 PF01171 PP-loop family HRI97_09170 PF01081 KDPG and KHG aldolase HRI97_09185 PF02021 Uncharacterised protein family UPF0102 HRI97_09205 PF01245 Ribosomal protein L19 HRI97_09210 PF01746 tRNA (Guanine-1)-methyltransferase HRI97_09225 PF00886 Ribosomal protein S16 HRI97_09235 PF00132 Bacterial transferase hexapeptide (six repeats) HRI97_09240 PF00535 Glycosyl transferase family 2 HRI97_09250 PF16363 GDP-mannose 4,6 dehydratase HRI97_09265 PF00205 Thiamine pyrophosphate enzyme, central domain HRI97_09265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRI97_09265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRI97_09275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRI97_09280 PF16363 GDP-mannose 4,6 dehydratase HRI97_09285 PF00483 Nucleotidyl transferase HRI97_09305 PF10431 C-terminal, D2-small domain, of ClpB protein HRI97_09305 PF00004 ATPase family associated with various cellular activities (AAA) HRI97_09305 PF17871 AAA lid domain HRI97_09305 PF02861 Clp amino terminal domain, pathogenicity island component HRI97_09305 PF07724 AAA domain (Cdc48 subfamily) HRI97_09325 PF08367 Peptidase M16C associated HRI97_09325 PF00675 Insulinase (Peptidase family M16) HRI97_09325 PF05193 Peptidase M16 inactive domain HRI97_09330 PF01706 FliG C-terminal domain HRI97_09330 PF14841 FliG middle domain HRI97_09330 PF14842 FliG N-terminal domain HRI97_09345 PF14537 Cytochrome c3 HRI97_09345 PF00890 FAD binding domain HRI97_09350 PF02779 Transketolase, pyrimidine binding domain HRI97_09350 PF00456 Transketolase, thiamine diphosphate binding domain HRI97_09360 PF00571 CBS domain HRI97_09360 PF00478 IMP dehydrogenase / GMP reductase domain HRI97_09365 PF00005 ABC transporter HRI97_09370 PF00005 ABC transporter HRI97_09370 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRI97_09375 PF11862 Domain of unknown function (DUF3382) HRI97_09375 PF02653 Branched-chain amino acid transport system / permease component HRI97_09380 PF02653 Branched-chain amino acid transport system / permease component HRI97_09385 PF13458 Periplasmic binding protein HRI97_09390 PF00004 ATPase family associated with various cellular activities (AAA) HRI97_09390 PF17862 AAA+ lid domain HRI97_09390 PF01434 Peptidase family M41 HRI97_09405 PF00186 Dihydrofolate reductase HRI97_09455 PF00672 HAMP domain HRI97_09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_09455 PF07730 Histidine kinase HRI97_09480 PF01029 NusB family HRI97_09490 PF01411 tRNA synthetases class II (A) HRI97_09490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRI97_09500 PF10371 Domain of unknown function HRI97_09500 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HRI97_09500 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HRI97_09500 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HRI97_09500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRI97_09505 PF00571 CBS domain HRI97_09505 PF00478 IMP dehydrogenase / GMP reductase domain HRI97_09560 PF00448 SRP54-type protein, GTPase domain HRI97_09560 PF02881 SRP54-type protein, helical bundle domain HRI97_09560 PF02978 Signal peptide binding domain HRI97_09565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HRI97_09565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HRI97_09570 PF00293 NUDIX domain HRI97_09570 PF09297 NADH pyrophosphatase zinc ribbon domain HRI97_09570 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HRI97_09585 PF05173 Dihydrodipicolinate reductase, C-terminus HRI97_09585 PF01113 Dihydrodipicolinate reductase, N-terminus HRI97_09590 PF03447 Homoserine dehydrogenase, NAD binding domain HRI97_09590 PF00742 Homoserine dehydrogenase HRI97_09590 PF13840 ACT domain HRI97_09590 PF01842 ACT domain HRI97_09590 PF00696 Amino acid kinase family HRI97_09615 PF00773 RNB domain HRI97_09635 PF17912 MalK OB fold domain HRI97_09635 PF03459 TOBE domain HRI97_09635 PF00005 ABC transporter HRI97_09645 PF01555 DNA methylase HRI97_09650 PF01871 AMMECR1 HRI97_09650 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HRI97_09660 PF07664 Ferrous iron transport protein B C terminus HRI97_09660 PF07670 Nucleoside recognition HRI97_09660 PF02421 Ferrous iron transport protein B HRI97_09665 PF01136 Peptidase family U32 HRI97_09665 PF16325 Peptidase family U32 C-terminal domain HRI97_09670 PF05437 Branched-chain amino acid transport protein (AzlD) HRI97_09675 PF03591 AzlC protein HRI97_09695 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRI97_09695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRI97_09700 PF08240 Alcohol dehydrogenase GroES-like domain HRI97_09700 PF00107 Zinc-binding dehydrogenase HRI97_09705 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRI97_09705 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRI97_09710 PF00830 Ribosomal L28 family HRI97_09715 PF12706 Beta-lactamase superfamily domain HRI97_09715 PF03099 Biotin/lipoate A/B protein ligase family HRI97_09720 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HRI97_09720 PF14572 Phosphoribosyl synthetase-associated domain HRI97_09745 PF01547 Bacterial extracellular solute-binding protein HRI97_09755 PF00005 ABC transporter HRI97_09755 PF08402 TOBE domain HRI97_09765 PF01609 Transposase DDE domain HRI97_09765 PF13808 DDE_Tnp_1-associated HRI97_09770 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_09775 PF02146 Sir2 family HRI97_09780 PF03553 Na+/H+ antiporter family HRI97_09800 PF06733 DEAD_2 HRI97_09800 PF13307 Helicase C-terminal domain HRI97_09805 PF13419 Haloacid dehalogenase-like hydrolase HRI97_09820 PF10458 Valyl tRNA synthetase tRNA binding arm HRI97_09820 PF00133 tRNA synthetases class I (I, L, M and V) HRI97_09820 PF08264 Anticodon-binding domain of tRNA HRI97_09825 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HRI97_09830 PF04002 RadC-like JAB domain HRI97_09840 PF00595 PDZ domain HRI97_09845 PF00919 Uncharacterized protein family UPF0004 HRI97_09845 PF01938 TRAM domain HRI97_09845 PF04055 Radical SAM superfamily HRI97_09850 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRI97_09850 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRI97_09865 PF16193 AAA C-terminal domain HRI97_09865 PF12002 MgsA AAA+ ATPase C terminal HRI97_09865 PF05496 Holliday junction DNA helicase RuvB P-loop domain HRI97_09870 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_09875 PF00815 Histidinol dehydrogenase HRI97_09880 PF01327 Polypeptide deformylase HRI97_09885 PF02911 Formyl transferase, C-terminal domain HRI97_09885 PF00551 Formyl transferase HRI97_09890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HRI97_09890 PF02769 AIR synthase related protein, C-terminal domain HRI97_09890 PF00586 AIR synthase related protein, N-terminal domain HRI97_09900 PF01595 Cyclin M transmembrane N-terminal domain HRI97_09900 PF03471 Transporter associated domain HRI97_09900 PF00571 CBS domain HRI97_09905 PF01595 Cyclin M transmembrane N-terminal domain HRI97_09905 PF03471 Transporter associated domain HRI97_09905 PF00571 CBS domain HRI97_09915 PF01479 S4 domain HRI97_09915 PF00849 RNA pseudouridylate synthase HRI97_09935 PF00300 Histidine phosphatase superfamily (branch 1) HRI97_09940 PF00403 Heavy-metal-associated domain HRI97_09945 PF02583 Metal-sensitive transcriptional repressor HRI97_09950 PF00709 Adenylosuccinate synthetase HRI97_09955 PF00679 Elongation factor G C-terminus HRI97_09955 PF14492 Elongation Factor G, domain II HRI97_09955 PF03144 Elongation factor Tu domain 2 HRI97_09955 PF00009 Elongation factor Tu GTP binding domain HRI97_09955 PF03764 Elongation factor G, domain IV HRI97_09960 PF00581 Rhodanese-like domain HRI97_09965 PF13419 Haloacid dehalogenase-like hydrolase HRI97_09970 PF01880 Desulfoferrodoxin HRI97_09970 PF06397 Desulfoferrodoxin, N-terminal domain HRI97_09975 PF07859 alpha/beta hydrolase fold HRI97_09975 PF13472 GDSL-like Lipase/Acylhydrolase family HRI97_10025 PF00294 pfkB family carbohydrate kinase HRI97_10065 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRI97_10140 PF05362 Lon protease (S16) C-terminal proteolytic domain HRI97_10140 PF02190 ATP-dependent protease La (LON) substrate-binding domain HRI97_10140 PF00004 ATPase family associated with various cellular activities (AAA) HRI97_10150 PF01027 Inhibitor of apoptosis-promoting Bax1 HRI97_10155 PF00860 Permease family HRI97_10165 PF01634 ATP phosphoribosyltransferase HRI97_10165 PF08029 HisG, C-terminal domain HRI97_10170 PF00475 Imidazoleglycerol-phosphate dehydratase HRI97_10175 PF03575 Peptidase family S51 HRI97_10185 PF01156 Inosine-uridine preferring nucleoside hydrolase HRI97_10190 PF13407 Periplasmic binding protein domain HRI97_10195 PF00005 ABC transporter HRI97_10200 PF02653 Branched-chain amino acid transport system / permease component HRI97_10210 PF00472 RF-1 domain HRI97_10210 PF03462 PCRF domain HRI97_10215 PF17827 PrmC N-terminal domain HRI97_10215 PF05175 Methyltransferase small domain HRI97_10220 PF10396 GTP-binding protein TrmE N-terminus HRI97_10220 PF12631 MnmE helical domain HRI97_10220 PF01926 50S ribosome-binding GTPase HRI97_10230 PF00436 Single-strand binding protein family HRI97_10245 PF00155 Aminotransferase class I and II HRI97_10250 PF00672 HAMP domain HRI97_10250 PF02743 Cache domain HRI97_10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRI97_10265 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_10305 PF00005 ABC transporter HRI97_10310 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10325 PF00464 Serine hydroxymethyltransferase HRI97_10330 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRI97_10340 PF00691 OmpA family HRI97_10350 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10355 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10360 PF00005 ABC transporter HRI97_10360 PF08402 TOBE domain HRI97_10410 PF02142 MGS-like domain HRI97_10425 PF00166 Chaperonin 10 Kd subunit HRI97_10435 PF00440 Bacterial regulatory proteins, tetR family HRI97_10435 PF08361 MAATS-type transcriptional repressor, C-terminal region HRI97_10440 PF04452 RNA methyltransferase HRI97_10445 PF03572 Peptidase family S41 HRI97_10445 PF13180 PDZ domain HRI97_10455 PF00118 TCP-1/cpn60 chaperonin family HRI97_10475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRI97_10510 PF01381 Helix-turn-helix HRI97_10530 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10535 PF09383 NIL domain HRI97_10535 PF00005 ABC transporter HRI97_10550 PF01926 50S ribosome-binding GTPase HRI97_10550 PF13167 GTP-binding GTPase N-terminal HRI97_10550 PF16360 GTP-binding GTPase Middle Region HRI97_10560 PF01551 Peptidase family M23 HRI97_10560 PF04225 Opacity-associated protein A LysM-like domain HRI97_10565 PF01728 FtsJ-like methyltransferase HRI97_10570 PF00348 Polyprenyl synthetase HRI97_10585 PF00072 Response regulator receiver domain HRI97_10585 PF01339 CheB methylesterase HRI97_10590 PF01739 CheR methyltransferase, SAM binding domain HRI97_10590 PF03705 CheR methyltransferase, all-alpha domain HRI97_10600 PF04452 RNA methyltransferase HRI97_10605 PF02653 Branched-chain amino acid transport system / permease component HRI97_10610 PF02653 Branched-chain amino acid transport system / permease component HRI97_10615 PF00005 ABC transporter HRI97_10635 PF00890 FAD binding domain HRI97_10635 PF04205 FMN-binding domain HRI97_10645 PF00380 Ribosomal protein S9/S16 HRI97_10650 PF00572 Ribosomal protein L13 HRI97_10655 PF13649 Methyltransferase domain HRI97_10660 PF04468 PSP1 C-terminal conserved region HRI97_10675 PF04225 Opacity-associated protein A LysM-like domain HRI97_10675 PF01551 Peptidase family M23 HRI97_10685 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HRI97_10685 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HRI97_10690 PF00563 EAL domain HRI97_10690 PF00498 FHA domain HRI97_10690 PF00990 Diguanylate cyclase, GGDEF domain HRI97_10700 PF00440 Bacterial regulatory proteins, tetR family HRI97_10700 PF16925 Tetracyclin repressor-like, C-terminal domain HRI97_10715 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_10720 PF03781 Sulfatase-modifying factor enzyme 1 HRI97_10740 PF16363 GDP-mannose 4,6 dehydratase HRI97_10745 PF07687 Peptidase dimerisation domain HRI97_10745 PF01546 Peptidase family M20/M25/M40 HRI97_10750 PF00128 Alpha amylase, catalytic domain HRI97_10750 PF02903 Alpha amylase, N-terminal ig-like domain HRI97_10750 PF16657 Maltogenic Amylase, C-terminal domain HRI97_10770 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10775 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10780 PF00128 Alpha amylase, catalytic domain HRI97_10800 PF00155 Aminotransferase class I and II HRI97_10805 PF01037 Lrp/AsnC ligand binding domain HRI97_10830 PF13614 AAA domain HRI97_10835 PF17762 HTH domain found in ParB protein HRI97_10835 PF02195 ParB-like nuclease domain HRI97_10845 PF00005 ABC transporter HRI97_10845 PF08402 TOBE domain HRI97_10850 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10860 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HRI97_10860 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HRI97_10865 PF00950 ABC 3 transport family HRI97_10870 PF00950 ABC 3 transport family HRI97_10875 PF00005 ABC transporter HRI97_10880 PF01297 Zinc-uptake complex component A periplasmic HRI97_10885 PF02742 Iron dependent repressor, metal binding and dimerisation domain HRI97_10885 PF01325 Iron dependent repressor, N-terminal DNA binding domain HRI97_10895 PF00574 Clp protease HRI97_10905 PF03880 DbpA RNA binding domain HRI97_10910 PF00753 Metallo-beta-lactamase superfamily HRI97_10915 PF13361 UvrD-like helicase C-terminal domain HRI97_10915 PF00580 UvrD/REP helicase N-terminal domain HRI97_10915 PF12705 PD-(D/E)XK nuclease superfamily HRI97_10945 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10950 PF00005 ABC transporter HRI97_10950 PF08402 TOBE domain HRI97_10955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRI97_10955 PF00005 ABC transporter HRI97_10960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRI97_10960 PF00005 ABC transporter HRI97_10965 PF12911 N-terminal TM domain of oligopeptide transport permease C HRI97_10965 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10970 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_10975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRI97_10985 PF04060 Putative Fe-S cluster HRI97_10990 PF02508 Rnf-Nqr subunit, membrane protein HRI97_10995 PF02508 Rnf-Nqr subunit, membrane protein HRI97_11005 PF03116 NQR2, RnfD, RnfE family HRI97_11010 PF13375 RnfC Barrel sandwich hybrid domain HRI97_11010 PF10531 SLBB domain HRI97_11010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HRI97_11010 PF13237 4Fe-4S dicluster domain HRI97_11015 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HRI97_11015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HRI97_11025 PF03480 Bacterial extracellular solute-binding protein, family 7 HRI97_11040 PF00005 ABC transporter HRI97_11055 PF06418 CTP synthase N-terminus HRI97_11055 PF00117 Glutamine amidotransferase class-I HRI97_11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRI97_11085 PF00356 Bacterial regulatory proteins, lacI family HRI97_11090 PF12833 Helix-turn-helix domain HRI97_11090 PF17853 GGDEF-like domain HRI97_11100 PF08402 TOBE domain HRI97_11100 PF00005 ABC transporter HRI97_11105 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_11110 PF00005 ABC transporter HRI97_11110 PF08402 TOBE domain HRI97_11140 PF00209 Sodium:neurotransmitter symporter family HRI97_11150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRI97_11150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HRI97_11150 PF02142 MGS-like domain HRI97_11175 PF01554 MatE HRI97_11190 PF00588 SpoU rRNA Methylase family HRI97_11190 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRI97_11195 PF02810 SEC-C motif HRI97_11200 PF00465 Iron-containing alcohol dehydrogenase HRI97_11245 PF13180 PDZ domain HRI97_11255 PF00258 Flavodoxin HRI97_11270 PF07670 Nucleoside recognition HRI97_11270 PF02421 Ferrous iron transport protein B HRI97_11270 PF17910 FeoB cytosolic helical domain HRI97_11270 PF04023 FeoA domain HRI97_11270 PF07664 Ferrous iron transport protein B C terminus HRI97_11285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRI97_11290 PF01808 AICARFT/IMPCHase bienzyme HRI97_11290 PF02142 MGS-like domain HRI97_11295 PF00953 Glycosyl transferase family 4 HRI97_11300 PF00873 AcrB/AcrD/AcrF family HRI97_11305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRI97_11315 PF02614 Glucuronate isomerase HRI97_11320 PF08125 Mannitol dehydrogenase C-terminal domain HRI97_11320 PF01232 Mannitol dehydrogenase Rossmann domain HRI97_11325 PF03786 D-mannonate dehydratase (UxuA) HRI97_11345 PF02872 5'-nucleotidase, C-terminal domain HRI97_11345 PF00149 Calcineurin-like phosphoesterase HRI97_11360 PF00950 ABC 3 transport family HRI97_11365 PF00005 ABC transporter HRI97_11385 PF13662 Toprim domain HRI97_11385 PF02132 RecR protein HRI97_11390 PF02575 YbaB/EbfC DNA-binding family HRI97_11395 PF12169 DNA polymerase III subunits gamma and tau domain III HRI97_11415 PF00578 AhpC/TSA family HRI97_11455 PF00873 AcrB/AcrD/AcrF family HRI97_11490 PF12848 ABC transporter HRI97_11490 PF00005 ABC transporter HRI97_11500 PF00654 Voltage gated chloride channel HRI97_11505 PF00877 NlpC/P60 family HRI97_11505 PF01476 LysM domain HRI97_11520 PF00501 AMP-binding enzyme HRI97_11550 PF01177 Asp/Glu/Hydantoin racemase HRI97_11565 PF00753 Metallo-beta-lactamase superfamily HRI97_11580 PF00005 ABC transporter HRI97_11610 PF01235 Sodium:alanine symporter family HRI97_11620 PF13407 Periplasmic binding protein domain HRI97_11625 PF02653 Branched-chain amino acid transport system / permease component HRI97_11630 PF00005 ABC transporter HRI97_11635 PF05025 RbsD / FucU transport protein family HRI97_11640 PF00294 pfkB family carbohydrate kinase HRI97_11645 PF01791 DeoC/LacD family aldolase HRI97_11650 PF00356 Bacterial regulatory proteins, lacI family HRI97_11680 PF00293 NUDIX domain HRI97_11695 PF00221 Aromatic amino acid lyase HRI97_11700 PF01554 MatE HRI97_11705 PF00109 Beta-ketoacyl synthase, N-terminal domain HRI97_11705 PF02801 Beta-ketoacyl synthase, C-terminal domain HRI97_11720 PF00109 Beta-ketoacyl synthase, N-terminal domain HRI97_11720 PF02801 Beta-ketoacyl synthase, C-terminal domain HRI97_11730 PF00005 ABC transporter HRI97_11735 PF00528 Binding-protein-dependent transport system inner membrane component HRI97_11760 PF13649 Methyltransferase domain HRI97_11770 PF00873 AcrB/AcrD/AcrF family HRI97_11775 PF00529 HlyD membrane-fusion protein of T1SS HRI97_11775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRI97_11785 PF00440 Bacterial regulatory proteins, tetR family HRI97_11790 PF00375 Sodium:dicarboxylate symporter family HRI97_11815 PF01970 Tripartite tricarboxylate transporter TctA family HRI97_11830 PF01761 3-dehydroquinate synthase HRI97_11830 PF02541 Ppx/GppA phosphatase family HRI97_11845 PF01381 Helix-turn-helix HRI97_11850 PF05973 Phage derived protein Gp49-like (DUF891) HRI97_11885 PF07977 FabA-like domain HRI97_11890 PF00501 AMP-binding enzyme HRI97_11890 PF13193 AMP-binding enzyme C-terminal domain HRI97_11895 PF00550 Phosphopantetheine attachment site HRI97_11900 PF00550 Phosphopantetheine attachment site HRI97_11915 PF01593 Flavin containing amine oxidoreductase HRI97_11920 PF03484 tRNA synthetase B5 domain HRI97_11920 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HRI97_11935 PF01970 Tripartite tricarboxylate transporter TctA family HRI97_11940 PF01132 Elongation factor P (EF-P) OB domain HRI97_11940 PF08207 Elongation factor P (EF-P) KOW-like domain HRI97_11940 PF09285 Elongation factor P, C-terminal HRI97_11955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRI97_11955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRI97_11955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRI97_11955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRI97_11960 PF06071 Protein of unknown function (DUF933) HRI97_11960 PF01926 50S ribosome-binding GTPase HRI97_11965 PF00005 ABC transporter HRI97_11965 PF16326 ABC transporter C-terminal domain HRI97_11965 PF12848 ABC transporter HRI97_11970 PF08239 Bacterial SH3 domain HRI97_11980 PF00293 NUDIX domain HRI97_11985 PF00005 ABC transporter HRI97_11985 PF02361 Cobalt transport protein HRI97_11995 PF01554 MatE HRI97_12005 PF13407 Periplasmic binding protein domain HRI97_12010 PF00005 ABC transporter HRI97_12015 PF02653 Branched-chain amino acid transport system / permease component HRI97_12020 PF02653 Branched-chain amino acid transport system / permease component HRI97_12025 PF13407 Periplasmic binding protein domain HRI97_12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_12030 PF00672 HAMP domain HRI97_12030 PF06580 Histidine kinase HRI97_12030 PF02743 Cache domain HRI97_12035 PF12833 Helix-turn-helix domain HRI97_12035 PF00072 Response regulator receiver domain HRI97_12040 PF00294 pfkB family carbohydrate kinase HRI97_12045 PF00210 Ferritin-like domain HRI97_12050 PF01161 Phosphatidylethanolamine-binding protein HRI97_12060 PF00483 Nucleotidyl transferase HRI97_12065 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HRI97_12070 PF16363 GDP-mannose 4,6 dehydratase HRI97_12090 PF02142 MGS-like domain HRI97_12090 PF01808 AICARFT/IMPCHase bienzyme HRI97_12095 PF00156 Phosphoribosyl transferase domain HRI97_12115 PF01726 LexA DNA binding domain HRI97_12115 PF00717 Peptidase S24-like HRI97_12120 PF00381 PTS HPr component phosphorylation site HRI97_12125 PF07475 HPr Serine kinase C-terminal domain HRI97_12125 PF02603 HPr Serine kinase N terminus HRI97_12130 PF13426 PAS domain HRI97_12130 PF02954 Bacterial regulatory protein, Fis family HRI97_12130 PF00158 Sigma-54 interaction domain HRI97_12140 PF00155 Aminotransferase class I and II HRI97_12145 PF07669 Eco57I restriction-modification methylase HRI97_12150 PF06616 BsuBI/PstI restriction endonuclease domain HRI97_12150 PF17728 BsuBI/PstI restriction endonuclease HTH domain HRI97_12155 PF00113 Enolase, C-terminal TIM barrel domain HRI97_12155 PF03952 Enolase, N-terminal domain HRI97_12160 PF08241 Methyltransferase domain HRI97_12165 PF01209 ubiE/COQ5 methyltransferase family HRI97_12175 PF00082 Subtilase family HRI97_12210 PF00593 TonB dependent receptor HRI97_12210 PF07715 TonB-dependent Receptor Plug Domain HRI97_12220 PF02472 Biopolymer transport protein ExbD/TolR HRI97_12225 PF01618 MotA/TolQ/ExbB proton channel family HRI97_12245 PF00005 ABC transporter HRI97_12245 PF00664 ABC transporter transmembrane region HRI97_12250 PF00664 ABC transporter transmembrane region HRI97_12250 PF00005 ABC transporter HRI97_12255 PF04304 Protein of unknown function (DUF454) HRI97_12260 PF00005 ABC transporter HRI97_12260 PF17912 MalK OB fold domain HRI97_12265 PF02386 Cation transport protein HRI97_12285 PF03167 Uracil DNA glycosylase superfamily HRI97_12290 PF00255 Glutathione peroxidase HRI97_12300 PF00890 FAD binding domain HRI97_12300 PF04205 FMN-binding domain HRI97_12305 PF00890 FAD binding domain HRI97_12305 PF04205 FMN-binding domain HRI97_12320 PF03806 AbgT putative transporter family HRI97_12325 PF01546 Peptidase family M20/M25/M40 HRI97_12325 PF07687 Peptidase dimerisation domain HRI97_12330 PF00155 Aminotransferase class I and II HRI97_12335 PF00158 Sigma-54 interaction domain HRI97_12335 PF02954 Bacterial regulatory protein, Fis family HRI97_12335 PF13426 PAS domain HRI97_12340 PF00183 Hsp90 protein HRI97_12345 PF00491 Arginase family HRI97_12350 PF14537 Cytochrome c3 HRI97_12350 PF00890 FAD binding domain HRI97_12355 PF02229 Transcriptional Coactivator p15 (PC4) HRI97_12360 PF06745 KaiC HRI97_12360 PF18073 Rubredoxin metal binding domain HRI97_12370 PF00309 Sigma-54 factor, Activator interacting domain (AID) HRI97_12370 PF04963 Sigma-54 factor, core binding domain HRI97_12370 PF04552 Sigma-54, DNA binding domain HRI97_12395 PF01202 Shikimate kinase HRI97_12400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRI97_12420 PF02915 Rubrerythrin HRI97_12425 PF13091 PLD-like domain HRI97_12430 PF00923 Transaldolase/Fructose-6-phosphate aldolase HRI97_12435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRI97_12435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRI97_12440 PF02653 Branched-chain amino acid transport system / permease component HRI97_12445 PF00005 ABC transporter HRI97_12450 PF13407 Periplasmic binding protein domain HRI97_12455 PF01380 SIS domain HRI97_12465 PF00455 DeoR C terminal sensor domain HRI97_12465 PF08220 DeoR-like helix-turn-helix domain HRI97_12495 PF09827 CRISPR associated protein Cas2 HRI97_12500 PF01867 CRISPR associated protein Cas1 HRI97_12520 PF09704 CRISPR-associated protein (Cas_Cas5) HRI97_12545 PF00011 Hsp20/alpha crystallin family HRI97_12565 PF03989 DNA gyrase C-terminal domain, beta-propeller HRI97_12565 PF00521 DNA gyrase/topoisomerase IV, subunit A HRI97_12570 PF00204 DNA gyrase B HRI97_12570 PF00986 DNA gyrase B subunit, carboxyl terminus HRI97_12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRI97_12570 PF01751 Toprim domain HRI97_12575 PF01625 Peptide methionine sulfoxide reductase HRI97_12575 PF01641 SelR domain