locus-tag class description E4O05_00005 PF00308 Bacterial dnaA protein E4O05_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4O05_00005 PF11638 DnaA N-terminal domain E4O05_00010 PF00204 DNA gyrase B E4O05_00010 PF00986 DNA gyrase B subunit, carboxyl terminus E4O05_00010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_00010 PF01751 Toprim domain E4O05_00025 PF00005 ABC transporter E4O05_00030 PF03960 ArsC family E4O05_00035 PF13176 Tetratricopeptide repeat E4O05_00035 PF13174 Tetratricopeptide repeat E4O05_00040 PF01515 Phosphate acetyl/butaryl transferase E4O05_00055 PF08279 HTH domain E4O05_00055 PF03099 Biotin/lipoate A/B protein ligase family E4O05_00055 PF02237 Biotin protein ligase C terminal domain E4O05_00060 PF00501 AMP-binding enzyme E4O05_00060 PF13193 AMP-binding enzyme C-terminal domain E4O05_00065 PF00109 Beta-ketoacyl synthase, N-terminal domain E4O05_00065 PF02801 Beta-ketoacyl synthase, C-terminal domain E4O05_00080 PF01230 HIT domain E4O05_00085 PF07728 AAA domain (dynein-related subfamily) E4O05_00085 PF12102 Domain of unknown function (DUF3578) E4O05_00125 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O05_00125 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4O05_00145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O05_00145 PF03129 Anticodon binding domain E4O05_00150 PF01268 Formate--tetrahydrofolate ligase E4O05_00155 PF01476 LysM domain E4O05_00155 PF00756 Putative esterase E4O05_00160 PF05343 M42 glutamyl aminopeptidase E4O05_00165 PF12002 MgsA AAA+ ATPase C terminal E4O05_00165 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_00165 PF16193 AAA C-terminal domain E4O05_00180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4O05_00180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4O05_00185 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4O05_00185 PF00578 AhpC/TSA family E4O05_00190 PF00210 Ferritin-like domain E4O05_00195 PF00293 NUDIX domain E4O05_00205 PF00403 Heavy-metal-associated domain E4O05_00215 PF01609 Transposase DDE domain E4O05_00215 PF13808 DDE_Tnp_1-associated E4O05_00240 PF00176 SNF2 family N-terminal domain E4O05_00240 PF00271 Helicase conserved C-terminal domain E4O05_00240 PF12419 SNF2 Helicase protein E4O05_00245 PF08011 PD-(D/E)XK nuclease superfamily E4O05_00245 PF09820 Predicted AAA-ATPase E4O05_00260 PF01979 Amidohydrolase family E4O05_00300 PF01313 Bacterial export proteins, family 3 E4O05_00305 PF01311 Bacterial export proteins, family 1 E4O05_00310 PF01312 FlhB HrpN YscU SpaS Family E4O05_00315 PF00771 FHIPEP family E4O05_00325 PF01192 RNA polymerase Rpb6 E4O05_00395 PF01872 RibD C-terminal domain E4O05_00450 PF00365 Phosphofructokinase E4O05_00465 PF00027 Cyclic nucleotide-binding domain E4O05_00465 PF13545 Crp-like helix-turn-helix domain E4O05_00470 PF07687 Peptidase dimerisation domain E4O05_00470 PF01546 Peptidase family M20/M25/M40 E4O05_00480 PF04545 Sigma-70, region 4 E4O05_00480 PF04539 Sigma-70 region 3 E4O05_00480 PF04542 Sigma-70 region 2 E4O05_00480 PF00140 Sigma-70 factor, region 1.2 E4O05_00480 PF03979 Sigma-70 factor, region 1.1 E4O05_00490 PF12392 Collagenase E4O05_00490 PF01136 Peptidase family U32 E4O05_00510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4O05_00510 PF01926 50S ribosome-binding GTPase E4O05_00515 PF05524 PEP-utilising enzyme, N-terminal E4O05_00515 PF00391 PEP-utilising enzyme, mobile domain E4O05_00515 PF02896 PEP-utilising enzyme, TIM barrel domain E4O05_00525 PF07687 Peptidase dimerisation domain E4O05_00525 PF01546 Peptidase family M20/M25/M40 E4O05_00530 PF00210 Ferritin-like domain E4O05_00535 PF01791 DeoC/LacD family aldolase E4O05_00550 PF07722 Peptidase C26 E4O05_00565 PF13808 DDE_Tnp_1-associated E4O05_00565 PF01609 Transposase DDE domain E4O05_00610 PF01702 Queuine tRNA-ribosyltransferase E4O05_00620 PF11967 Recombination protein O N terminal E4O05_00620 PF02565 Recombination protein O C terminal E4O05_00630 PF00270 DEAD/DEAH box helicase E4O05_00630 PF00271 Helicase conserved C-terminal domain E4O05_00630 PF00570 HRDC domain E4O05_00630 PF16124 RecQ zinc-binding E4O05_00630 PF09382 RQC domain E4O05_00635 PF02915 Rubrerythrin E4O05_00650 PF00005 ABC transporter E4O05_00650 PF00664 ABC transporter transmembrane region E4O05_00650 PF03412 Peptidase C39 family E4O05_00700 PF00672 HAMP domain E4O05_00700 PF02743 Cache domain E4O05_00700 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_00705 PF01435 Peptidase family M48 E4O05_00715 PF00175 Oxidoreductase NAD-binding domain E4O05_00715 PF00970 Oxidoreductase FAD-binding domain E4O05_00715 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4O05_00720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O05_00720 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_00725 PF08011 PD-(D/E)XK nuclease superfamily E4O05_00725 PF09820 Predicted AAA-ATPase E4O05_00735 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4O05_00740 PF03466 LysR substrate binding domain E4O05_00745 PF03989 DNA gyrase C-terminal domain, beta-propeller E4O05_00745 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O05_00750 PF02080 TrkA-C domain E4O05_00750 PF02254 TrkA-N domain E4O05_00760 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E4O05_00780 PF03144 Elongation factor Tu domain 2 E4O05_00780 PF00679 Elongation factor G C-terminus E4O05_00780 PF14492 Elongation Factor G, domain II E4O05_00780 PF03764 Elongation factor G, domain IV E4O05_00780 PF00009 Elongation factor Tu GTP binding domain E4O05_00790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4O05_00795 PF01850 PIN domain E4O05_00800 PF00274 Fructose-bisphosphate aldolase class-I E4O05_00805 PF01555 DNA methylase E4O05_00805 PF18755 Restriction Enzyme Adenine Methylase Associated E4O05_00815 PF00317 Ribonucleotide reductase, all-alpha domain E4O05_00815 PF03477 ATP cone domain E4O05_00815 PF02867 Ribonucleotide reductase, barrel domain E4O05_00825 PF02743 Cache domain E4O05_00825 PF00672 HAMP domain E4O05_00825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_00830 PF02203 Tar ligand binding domain homologue E4O05_00830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_00830 PF00672 HAMP domain E4O05_00840 PF03616 Sodium/glutamate symporter E4O05_00845 PF03023 Lipid II flippase MurJ E4O05_00855 PF02875 Mur ligase family, glutamate ligase domain E4O05_00855 PF08245 Mur ligase middle domain E4O05_00860 PF13439 Glycosyltransferase Family 4 E4O05_00860 PF00534 Glycosyl transferases group 1 E4O05_00865 PF00005 ABC transporter E4O05_00865 PF08402 TOBE domain E4O05_00870 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_00900 PF00005 ABC transporter E4O05_00910 PF00005 ABC transporter E4O05_00910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_00915 PF00005 ABC transporter E4O05_00915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_00920 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_00920 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O05_00925 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_00930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O05_00940 PF00005 ABC transporter E4O05_00940 PF17912 MalK OB fold domain E4O05_00945 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_00950 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_00955 PF13416 Bacterial extracellular solute-binding protein E4O05_00965 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4O05_00975 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E4O05_00980 PF02971 Formiminotransferase domain E4O05_00980 PF07837 Formiminotransferase domain, N-terminal subdomain E4O05_00995 PF02789 Cytosol aminopeptidase family, N-terminal domain E4O05_00995 PF00883 Cytosol aminopeptidase family, catalytic domain E4O05_01000 PF00990 Diguanylate cyclase, GGDEF domain E4O05_01005 PF12161 HsdM N-terminal domain E4O05_01005 PF02384 N-6 DNA Methylase E4O05_01020 PF01420 Type I restriction modification DNA specificity domain E4O05_01025 PF18766 SWI2/SNF2 ATPase E4O05_01025 PF12008 Type I restriction and modification enzyme - subunit R C terminal E4O05_01025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4O05_01030 PF03575 Peptidase family S51 E4O05_01040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O05_01050 PF01926 50S ribosome-binding GTPase E4O05_01050 PF06071 Protein of unknown function (DUF933) E4O05_01055 PF01343 Peptidase family S49 E4O05_01060 PF01208 Uroporphyrinogen decarboxylase (URO-D) E4O05_01080 PF02310 B12 binding domain E4O05_01080 PF02607 B12 binding domain E4O05_01095 PF00005 ABC transporter E4O05_01140 PF02511 Thymidylate synthase complementing protein E4O05_01145 PF02386 Cation transport protein E4O05_01150 PF02254 TrkA-N domain E4O05_01150 PF02080 TrkA-C domain E4O05_01160 PF07726 ATPase family associated with various cellular activities (AAA) E4O05_01160 PF17863 AAA lid domain E4O05_01165 PF01595 Cyclin M transmembrane N-terminal domain E4O05_01165 PF03471 Transporter associated domain E4O05_01165 PF00571 CBS domain E4O05_01170 PF01595 Cyclin M transmembrane N-terminal domain E4O05_01170 PF00571 CBS domain E4O05_01170 PF03471 Transporter associated domain E4O05_01185 PF00270 DEAD/DEAH box helicase E4O05_01185 PF00271 Helicase conserved C-terminal domain E4O05_01185 PF16124 RecQ zinc-binding E4O05_01185 PF09382 RQC domain E4O05_01185 PF00570 HRDC domain E4O05_01295 PF01726 LexA DNA binding domain E4O05_01295 PF00717 Peptidase S24-like E4O05_01345 PF04233 Phage Mu protein F like protein E4O05_01350 PF04545 Sigma-70, region 4 E4O05_01350 PF04542 Sigma-70 region 2 E4O05_01350 PF04539 Sigma-70 region 3 E4O05_01420 PF00877 NlpC/P60 family E4O05_01450 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 E4O05_01450 PF13395 HNH endonuclease E4O05_01450 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 E4O05_01450 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 E4O05_01470 PF17922 Tetracyclin repressor-like, C-terminal domain E4O05_01470 PF00440 Bacterial regulatory proteins, tetR family E4O05_01475 PF01554 MatE E4O05_01490 PF08281 Sigma-70, region 4 E4O05_01490 PF04542 Sigma-70 region 2 E4O05_01495 PF00268 Ribonucleotide reductase, small chain E4O05_01500 PF01594 AI-2E family transporter E4O05_01505 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4O05_01510 PF03601 Conserved hypothetical protein 698 E4O05_01515 PF01212 Beta-eliminating lyase E4O05_01525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O05_01530 PF02504 Fatty acid synthesis protein E4O05_01535 PF00085 Thioredoxin E4O05_01540 PF00085 Thioredoxin E4O05_01545 PF12072 Domain of unknown function (DUF3552) E4O05_01545 PF00013 KH domain E4O05_01545 PF01966 HD domain E4O05_01555 PF01661 Macro domain E4O05_01560 PF02768 DNA polymerase III beta subunit, C-terminal domain E4O05_01560 PF02767 DNA polymerase III beta subunit, central domain E4O05_01560 PF00712 DNA polymerase III beta subunit, N-terminal domain E4O05_01565 PF02463 RecF/RecN/SMC N terminal domain E4O05_01570 PF13808 DDE_Tnp_1-associated E4O05_01570 PF01609 Transposase DDE domain E4O05_01585 PF00145 C-5 cytosine-specific DNA methylase E4O05_01630 PF00753 Metallo-beta-lactamase superfamily E4O05_01640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4O05_01640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4O05_01685 PF07238 PilZ domain E4O05_01710 PF12557 Cob(I)alamin adenosyltransferase N terminal E4O05_01710 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E4O05_01715 PF03600 Citrate transporter E4O05_01720 PF02595 Glycerate kinase family E4O05_01735 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4O05_01750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O05_01760 PF00664 ABC transporter transmembrane region E4O05_01760 PF00005 ABC transporter E4O05_01770 PF00005 ABC transporter E4O05_01805 PF13651 Adenine-specific methyltransferase EcoRI E4O05_01825 PF02661 Fic/DOC family E4O05_01830 PF00892 EamA-like transporter family E4O05_01835 PF01925 Sulfite exporter TauE/SafE E4O05_01840 PF00962 Adenosine/AMP deaminase E4O05_01865 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_01870 PF00005 ABC transporter E4O05_01870 PF08402 TOBE domain E4O05_01890 PF01470 Pyroglutamyl peptidase E4O05_01920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_01920 PF00672 HAMP domain E4O05_01920 PF02743 Cache domain E4O05_01925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4O05_01925 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4O05_01925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4O05_01930 PF17854 FtsK alpha domain E4O05_01930 PF09397 Ftsk gamma domain E4O05_01930 PF01580 FtsK/SpoIIIE family E4O05_01935 PF02673 Bacitracin resistance protein BacA E4O05_01940 PF13476 AAA domain E4O05_01945 PF00149 Calcineurin-like phosphoesterase E4O05_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_01950 PF12729 Four helix bundle sensory module for signal transduction E4O05_01950 PF00672 HAMP domain E4O05_01960 PF00005 ABC transporter E4O05_01980 PF00258 Flavodoxin E4O05_01995 PF01081 KDPG and KHG aldolase E4O05_02010 PF00672 HAMP domain E4O05_02010 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_02015 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_02020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O05_02020 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_02040 PF00072 Response regulator receiver domain E4O05_02040 PF00196 Bacterial regulatory proteins, luxR family E4O05_02045 PF07730 Histidine kinase E4O05_02050 PF01546 Peptidase family M20/M25/M40 E4O05_02050 PF07687 Peptidase dimerisation domain E4O05_02065 PF08402 TOBE domain E4O05_02065 PF00005 ABC transporter E4O05_02070 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_02075 PF01547 Bacterial extracellular solute-binding protein E4O05_02145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O05_02145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O05_02155 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_02155 PF04324 BFD-like [2Fe-2S] binding domain E4O05_02160 PF01266 FAD dependent oxidoreductase E4O05_02165 PF07729 FCD domain E4O05_02165 PF00392 Bacterial regulatory proteins, gntR family E4O05_02175 PF00375 Sodium:dicarboxylate symporter family E4O05_02180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O05_02180 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4O05_02180 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4O05_02180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O05_02185 PF08448 PAS fold E4O05_02185 PF00990 Diguanylate cyclase, GGDEF domain E4O05_02185 PF00563 EAL domain E4O05_02200 PF00990 Diguanylate cyclase, GGDEF domain E4O05_02200 PF00072 Response regulator receiver domain E4O05_02215 PF01207 Dihydrouridine synthase (Dus) E4O05_02245 PF03824 High-affinity nickel-transport protein E4O05_02260 PF04468 PSP1 C-terminal conserved region E4O05_02265 PF03885 Protein of unknown function (DUF327) E4O05_02275 PF01551 Peptidase family M23 E4O05_02275 PF04225 Opacity-associated protein A LysM-like domain E4O05_02280 PF01409 tRNA synthetases class II core domain (F) E4O05_02290 PF00128 Alpha amylase, catalytic domain E4O05_02300 PF12683 Protein of unknown function (DUF3798) E4O05_02305 PF00005 ABC transporter E4O05_02325 PF09820 Predicted AAA-ATPase E4O05_02325 PF08011 PD-(D/E)XK nuclease superfamily E4O05_02330 PF01048 Phosphorylase superfamily E4O05_02335 PF01761 3-dehydroquinate synthase E4O05_02340 PF00266 Aminotransferase class-V E4O05_02350 PF00128 Alpha amylase, catalytic domain E4O05_02350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4O05_02375 PF07676 WD40-like Beta Propeller Repeat E4O05_02375 PF00326 Prolyl oligopeptidase family E4O05_02380 PF01555 DNA methylase E4O05_02380 PF18273 Type III R-M EcoP15I C-terminal domain E4O05_02395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O05_02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_02405 PF01565 FAD binding domain E4O05_02405 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4O05_02410 PF09190 DALR domain E4O05_02410 PF01406 tRNA synthetases class I (C) catalytic domain E4O05_02425 PF01841 Transglutaminase-like superfamily E4O05_02430 PF02386 Cation transport protein E4O05_02435 PF02080 TrkA-C domain E4O05_02435 PF02254 TrkA-N domain E4O05_02440 PF12705 PD-(D/E)XK nuclease superfamily E4O05_02445 PF12705 PD-(D/E)XK nuclease superfamily E4O05_02445 PF13361 UvrD-like helicase C-terminal domain E4O05_02445 PF00580 UvrD/REP helicase N-terminal domain E4O05_02465 PF01171 PP-loop family E4O05_02470 PF00288 GHMP kinases N terminal domain E4O05_02470 PF08544 GHMP kinases C terminal E4O05_02470 PF10509 Galactokinase galactose-binding signature E4O05_02475 PF01680 SOR/SNZ family E4O05_02485 PF12671 Putative amidase domain E4O05_02490 PF02743 Cache domain E4O05_02490 PF00672 HAMP domain E4O05_02490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_02500 PF01048 Phosphorylase superfamily E4O05_02525 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_02525 PF17862 AAA+ lid domain E4O05_02525 PF01434 Peptidase family M41 E4O05_02550 PF03781 Sulfatase-modifying factor enzyme 1 E4O05_02565 PF12704 MacB-like periplasmic core domain E4O05_02565 PF00005 ABC transporter E4O05_02565 PF02687 FtsX-like permease family E4O05_02570 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O05_02585 PF03063 Prismane/CO dehydrogenase family E4O05_02610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_02610 PF02743 Cache domain E4O05_02610 PF00672 HAMP domain E4O05_02625 PF00005 ABC transporter E4O05_02630 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4O05_02650 PF02637 GatB domain E4O05_02650 PF02934 GatB/GatE catalytic domain E4O05_02655 PF01425 Amidase E4O05_02695 PF07726 ATPase family associated with various cellular activities (AAA) E4O05_02695 PF17863 AAA lid domain E4O05_02705 PF03773 Predicted permease E4O05_02715 PF09820 Predicted AAA-ATPase E4O05_02715 PF08011 PD-(D/E)XK nuclease superfamily E4O05_02725 PF00221 Aromatic amino acid lyase E4O05_02740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4O05_02745 PF01039 Carboxyl transferase domain E4O05_02750 PF02785 Biotin carboxylase C-terminal domain E4O05_02750 PF00289 Biotin carboxylase, N-terminal domain E4O05_02750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4O05_02755 PF00364 Biotin-requiring enzyme E4O05_02775 PF17191 RecG wedge domain E4O05_02775 PF00270 DEAD/DEAH box helicase E4O05_02775 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O05_02780 PF07055 Enoyl reductase FAD binding domain E4O05_02780 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4O05_02780 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4O05_02800 PF00698 Acyl transferase domain E4O05_02805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O05_02805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4O05_02820 PF17762 HTH domain found in ParB protein E4O05_02820 PF02195 ParB-like nuclease domain E4O05_02825 PF13614 AAA domain E4O05_02840 PF00684 DnaJ central domain E4O05_02840 PF00226 DnaJ domain E4O05_02840 PF01556 DnaJ C terminal domain E4O05_02870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O05_02875 PF11760 Cobalamin synthesis G N-terminal E4O05_02875 PF01890 Cobalamin synthesis G C-terminus E4O05_02875 PF11761 Cobalamin biosynthesis central region E4O05_02905 PF01554 MatE E4O05_02915 PF09820 Predicted AAA-ATPase E4O05_02915 PF08011 PD-(D/E)XK nuclease superfamily E4O05_02920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4O05_02920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O05_02925 PF02571 Precorrin-6x reductase CbiJ/CobK E4O05_02930 PF00005 ABC transporter E4O05_02940 PF02661 Fic/DOC family E4O05_02940 PF12728 Helix-turn-helix domain E4O05_02945 PF01025 GrpE E4O05_02950 PF00012 Hsp70 protein E4O05_02955 PF01556 DnaJ C terminal domain E4O05_02955 PF00226 DnaJ domain E4O05_02955 PF00684 DnaJ central domain E4O05_02980 PF01545 Cation efflux family E4O05_02980 PF16916 Dimerisation domain of Zinc Transporter E4O05_02985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_02985 PF00005 ABC transporter E4O05_02990 PF00005 ABC transporter E4O05_02990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_02995 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_02995 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O05_03000 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_03005 PF00672 HAMP domain E4O05_03005 PF02743 Cache domain E4O05_03005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_03010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O05_03020 PF01195 Peptidyl-tRNA hydrolase E4O05_03025 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O05_03025 PF00005 ABC transporter E4O05_03040 PF03705 CheR methyltransferase, all-alpha domain E4O05_03040 PF01739 CheR methyltransferase, SAM binding domain E4O05_03045 PF01339 CheB methylesterase E4O05_03045 PF00072 Response regulator receiver domain E4O05_03065 PF03030 Inorganic H+ pyrophosphatase E4O05_03070 PF00072 Response regulator receiver domain E4O05_03070 PF00486 Transcriptional regulatory protein, C terminal E4O05_03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_03080 PF00005 ABC transporter E4O05_03100 PF08279 HTH domain E4O05_03100 PF13280 WYL domain E4O05_03115 PF00691 OmpA family E4O05_03120 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O05_03120 PF10371 Domain of unknown function E4O05_03120 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O05_03120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O05_03120 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O05_03145 PF06418 CTP synthase N-terminus E4O05_03145 PF00117 Glutamine amidotransferase class-I E4O05_03155 PF00155 Aminotransferase class I and II E4O05_03160 PF00448 SRP54-type protein, GTPase domain E4O05_03165 PF10609 NUBPL iron-transfer P-loop NTPase E4O05_03175 PF04542 Sigma-70 region 2 E4O05_03175 PF04545 Sigma-70, region 4 E4O05_03175 PF04539 Sigma-70 region 3 E4O05_03205 PF00291 Pyridoxal-phosphate dependent enzyme E4O05_03230 PF00953 Glycosyl transferase family 4 E4O05_03235 PF01066 CDP-alcohol phosphatidyltransferase E4O05_03240 PF00464 Serine hydroxymethyltransferase E4O05_03255 PF00571 CBS domain E4O05_03255 PF00478 IMP dehydrogenase / GMP reductase domain E4O05_03260 PF08264 Anticodon-binding domain of tRNA E4O05_03260 PF00133 tRNA synthetases class I (I, L, M and V) E4O05_03280 PF11849 Domain of unknown function (DUF3369) E4O05_03285 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O05_03285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E4O05_03290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O05_03295 PF06180 Cobalt chelatase (CbiK) E4O05_03305 PF00005 ABC transporter E4O05_03315 PF03099 Biotin/lipoate A/B protein ligase family E4O05_03315 PF10437 Bacterial lipoate protein ligase C-terminus E4O05_03320 PF17728 BsuBI/PstI restriction endonuclease HTH domain E4O05_03320 PF06616 BsuBI/PstI restriction endonuclease domain E4O05_03325 PF07669 Eco57I restriction-modification methylase E4O05_03330 PF00005 ABC transporter E4O05_03330 PF00571 CBS domain E4O05_03340 PF04324 BFD-like [2Fe-2S] binding domain E4O05_03340 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_03345 PF01266 FAD dependent oxidoreductase E4O05_03355 PF12728 Helix-turn-helix domain E4O05_03355 PF02661 Fic/DOC family E4O05_03365 PF08439 Oligopeptidase F E4O05_03365 PF01432 Peptidase family M3 E4O05_03385 PF01625 Peptide methionine sulfoxide reductase E4O05_03385 PF01641 SelR domain E4O05_03405 PF02719 Polysaccharide biosynthesis protein E4O05_03415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O05_03425 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O05_03425 PF01799 [2Fe-2S] binding domain E4O05_03430 PF00941 FAD binding domain in molybdopterin dehydrogenase E4O05_03430 PF03450 CO dehydrogenase flavoprotein C-terminal domain E4O05_03460 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_03465 PF00085 Thioredoxin E4O05_03495 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4O05_03500 PF03553 Na+/H+ antiporter family E4O05_03520 PF00009 Elongation factor Tu GTP binding domain E4O05_03520 PF03144 Elongation factor Tu domain 2 E4O05_03520 PF03143 Elongation factor Tu C-terminal domain E4O05_03525 PF00338 Ribosomal protein S10p/S20e E4O05_03530 PF00297 Ribosomal protein L3 E4O05_03535 PF00573 Ribosomal protein L4/L1 family E4O05_03540 PF00276 Ribosomal protein L23 E4O05_03545 PF00181 Ribosomal Proteins L2, RNA binding domain E4O05_03545 PF03947 Ribosomal Proteins L2, C-terminal domain E4O05_03550 PF00203 Ribosomal protein S19 E4O05_03555 PF00237 Ribosomal protein L22p/L17e E4O05_03560 PF00189 Ribosomal protein S3, C-terminal domain E4O05_03560 PF07650 KH domain E4O05_03565 PF00252 Ribosomal protein L16p/L10e E4O05_03570 PF00831 Ribosomal L29 protein E4O05_03575 PF00366 Ribosomal protein S17 E4O05_03580 PF00238 Ribosomal protein L14p/L23e E4O05_03585 PF00467 KOW motif E4O05_03585 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4O05_03590 PF00281 Ribosomal protein L5 E4O05_03590 PF00673 ribosomal L5P family C-terminus E4O05_03595 PF00253 Ribosomal protein S14p/S29e E4O05_03600 PF00410 Ribosomal protein S8 E4O05_03605 PF00347 Ribosomal protein L6 E4O05_03610 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4O05_03615 PF00333 Ribosomal protein S5, N-terminal domain E4O05_03615 PF03719 Ribosomal protein S5, C-terminal domain E4O05_03620 PF00327 Ribosomal protein L30p/L7e E4O05_03625 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4O05_03630 PF00344 SecY translocase E4O05_03635 PF00444 Ribosomal protein L36 E4O05_03640 PF00416 Ribosomal protein S13/S18 E4O05_03645 PF00411 Ribosomal protein S11 E4O05_03650 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4O05_03650 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4O05_03650 PF01000 RNA polymerase Rpb3/RpoA insert domain E4O05_03655 PF01196 Ribosomal protein L17 E4O05_03675 PF00708 Acylphosphatase E4O05_03685 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O05_03700 PF00583 Acetyltransferase (GNAT) family E4O05_03705 PF02082 Transcriptional regulator E4O05_03730 PF13396 Phospholipase_D-nuclease N-terminal E4O05_03730 PF13091 PLD-like domain E4O05_03735 PF01139 tRNA-splicing ligase RtcB E4O05_03790 PF01609 Transposase DDE domain E4O05_03790 PF13808 DDE_Tnp_1-associated E4O05_03865 PF00486 Transcriptional regulatory protein, C terminal E4O05_03865 PF00072 Response regulator receiver domain E4O05_03870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4O05_03870 PF01627 Hpt domain E4O05_03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_03870 PF00672 HAMP domain E4O05_03870 PF00072 Response regulator receiver domain E4O05_03870 PF00512 His Kinase A (phospho-acceptor) domain E4O05_03875 PF00005 ABC transporter E4O05_03905 PF00005 ABC transporter E4O05_03920 PF01022 Bacterial regulatory protein, arsR family E4O05_03925 PF11855 Protein of unknown function (DUF3375) E4O05_03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_03950 PF00672 HAMP domain E4O05_03950 PF17202 Single cache domain 3 E4O05_03960 PF02311 AraC-like ligand binding domain E4O05_03960 PF12833 Helix-turn-helix domain E4O05_03965 PF00664 ABC transporter transmembrane region E4O05_03965 PF00005 ABC transporter E4O05_03965 PF03412 Peptidase C39 family E4O05_03970 PF00664 ABC transporter transmembrane region E4O05_03970 PF00005 ABC transporter E4O05_03990 PF02678 Pirin E4O05_03990 PF05726 Pirin C-terminal cupin domain E4O05_04000 PF01613 Flavin reductase like domain E4O05_04005 PF01638 HxlR-like helix-turn-helix E4O05_04015 PF00005 ABC transporter E4O05_04015 PF00664 ABC transporter transmembrane region E4O05_04020 PF00005 ABC transporter E4O05_04020 PF00664 ABC transporter transmembrane region E4O05_04025 PF00664 ABC transporter transmembrane region E4O05_04025 PF00005 ABC transporter E4O05_04025 PF08021 Siderophore-interacting FAD-binding domain E4O05_04025 PF04954 Siderophore-interacting protein E4O05_04035 PF00664 ABC transporter transmembrane region E4O05_04035 PF00005 ABC transporter E4O05_04040 PF00005 ABC transporter E4O05_04055 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O05_04055 PF00440 Bacterial regulatory proteins, tetR family E4O05_04060 PF07977 FabA-like domain E4O05_04070 PF01225 Mur ligase family, catalytic domain E4O05_04070 PF08245 Mur ligase middle domain E4O05_04070 PF02875 Mur ligase family, glutamate ligase domain E4O05_04075 PF01921 tRNA synthetases class I (K) E4O05_04090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O05_04090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O05_04125 PF00224 Pyruvate kinase, barrel domain E4O05_04125 PF02887 Pyruvate kinase, alpha/beta domain E4O05_04125 PF00391 PEP-utilising enzyme, mobile domain E4O05_04130 PF00730 HhH-GPD superfamily base excision DNA repair protein E4O05_04155 PF04055 Radical SAM superfamily E4O05_04160 PF08011 PD-(D/E)XK nuclease superfamily E4O05_04160 PF09820 Predicted AAA-ATPase E4O05_04165 PF00149 Calcineurin-like phosphoesterase E4O05_04190 PF01973 Protein of unknown function DUF115 E4O05_04195 PF00005 ABC transporter E4O05_04200 PF00664 ABC transporter transmembrane region E4O05_04200 PF00005 ABC transporter E4O05_04205 PF09820 Predicted AAA-ATPase E4O05_04205 PF08011 PD-(D/E)XK nuclease superfamily E4O05_04210 PF18073 Rubredoxin metal binding domain E4O05_04210 PF06745 KaiC E4O05_04225 PF02527 rRNA small subunit methyltransferase G E4O05_04230 PF00171 Aldehyde dehydrogenase family E4O05_04245 PF00814 Glycoprotease family E4O05_04260 PF00072 Response regulator receiver domain E4O05_04260 PF00672 HAMP domain E4O05_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_04260 PF00512 His Kinase A (phospho-acceptor) domain E4O05_04260 PF01627 Hpt domain E4O05_04260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4O05_04265 PF00072 Response regulator receiver domain E4O05_04265 PF00486 Transcriptional regulatory protein, C terminal E4O05_04275 PF08241 Methyltransferase domain E4O05_04285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_04285 PF16591 Helical bimodular sensor domain E4O05_04285 PF00672 HAMP domain E4O05_04295 PF03167 Uracil DNA glycosylase superfamily E4O05_04300 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4O05_04300 PF00270 DEAD/DEAH box helicase E4O05_04300 PF00271 Helicase conserved C-terminal domain E4O05_04300 PF17764 3′ DNA-binding domain (3′BD) E4O05_04300 PF18074 Primosomal protein N C-terminal domain E4O05_04305 PF08011 PD-(D/E)XK nuclease superfamily E4O05_04305 PF09820 Predicted AAA-ATPase E4O05_04310 PF03462 PCRF domain E4O05_04310 PF00472 RF-1 domain E4O05_04315 PF17827 PrmC N-terminal domain E4O05_04315 PF02390 Putative methyltransferase E4O05_04315 PF05175 Methyltransferase small domain E4O05_04320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_04320 PF02743 Cache domain E4O05_04320 PF00672 HAMP domain E4O05_04325 PF00183 Hsp90 protein E4O05_04340 PF01541 GIY-YIG catalytic domain E4O05_04340 PF02151 UvrB/uvrC motif E4O05_04340 PF08459 UvrC Helix-hairpin-helix N-terminal E4O05_04345 PF09820 Predicted AAA-ATPase E4O05_04345 PF08011 PD-(D/E)XK nuclease superfamily E4O05_04350 PF12390 Selenocysteine synthase N terminal E4O05_04350 PF03841 L-seryl-tRNA selenium transferase E4O05_04365 PF00696 Amino acid kinase family E4O05_04370 PF01554 MatE E4O05_04375 PF01165 Ribosomal protein S21 E4O05_04380 PF01609 Transposase DDE domain E4O05_04380 PF13808 DDE_Tnp_1-associated E4O05_04390 PF13808 DDE_Tnp_1-associated E4O05_04390 PF01609 Transposase DDE domain E4O05_04395 PF02772 S-adenosylmethionine synthetase, central domain E4O05_04395 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4O05_04395 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4O05_04410 PF01206 Sulfurtransferase TusA E4O05_04430 PF00266 Aminotransferase class-V E4O05_04465 PF00005 ABC transporter E4O05_04475 PF00005 ABC transporter E4O05_04485 PF02547 Queuosine biosynthesis protein E4O05_04490 PF12796 Ankyrin repeats (3 copies) E4O05_04495 PF01871 AMMECR1 E4O05_04495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4O05_04500 PF09820 Predicted AAA-ATPase E4O05_04500 PF08011 PD-(D/E)XK nuclease superfamily E4O05_04505 PF01609 Transposase DDE domain E4O05_04505 PF13808 DDE_Tnp_1-associated E4O05_04515 PF01202 Shikimate kinase E4O05_04520 PF03949 Malic enzyme, NAD binding domain E4O05_04520 PF00390 Malic enzyme, N-terminal domain E4O05_04525 PF05343 M42 glutamyl aminopeptidase E4O05_04530 PF07885 Ion channel E4O05_04530 PF02254 TrkA-N domain E4O05_04575 PF00664 ABC transporter transmembrane region E4O05_04575 PF00005 ABC transporter E4O05_04575 PF03412 Peptidase C39 family E4O05_04600 PF00471 Ribosomal protein L33 E4O05_04610 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4O05_04615 PF02357 Transcription termination factor nusG E4O05_04615 PF00467 KOW motif E4O05_04620 PF00298 Ribosomal protein L11, RNA binding domain E4O05_04620 PF03946 Ribosomal protein L11, N-terminal domain E4O05_04625 PF00687 Ribosomal protein L1p/L10e family E4O05_04630 PF00466 Ribosomal protein L10 E4O05_04635 PF16320 Ribosomal protein L7/L12 dimerisation domain E4O05_04635 PF00542 Ribosomal protein L7/L12 C-terminal domain E4O05_04640 PF10385 RNA polymerase beta subunit external 1 domain E4O05_04640 PF04560 RNA polymerase Rpb2, domain 7 E4O05_04640 PF04561 RNA polymerase Rpb2, domain 2 E4O05_04640 PF04563 RNA polymerase beta subunit E4O05_04640 PF00562 RNA polymerase Rpb2, domain 6 E4O05_04640 PF04565 RNA polymerase Rpb2, domain 3 E4O05_04645 PF04997 RNA polymerase Rpb1, domain 1 E4O05_04645 PF05000 RNA polymerase Rpb1, domain 4 E4O05_04645 PF04983 RNA polymerase Rpb1, domain 3 E4O05_04645 PF00623 RNA polymerase Rpb1, domain 2 E4O05_04645 PF04998 RNA polymerase Rpb1, domain 5 E4O05_04665 PF00343 Carbohydrate phosphorylase E4O05_04680 PF00155 Aminotransferase class I and II E4O05_04695 PF08011 PD-(D/E)XK nuclease superfamily E4O05_04695 PF09820 Predicted AAA-ATPase E4O05_04705 PF00156 Phosphoribosyl transferase domain E4O05_04705 PF13537 Glutamine amidotransferase domain E4O05_04710 PF01609 Transposase DDE domain E4O05_04710 PF13808 DDE_Tnp_1-associated E4O05_04740 PF04963 Sigma-54 factor, core binding domain E4O05_04740 PF04552 Sigma-54, DNA binding domain E4O05_04740 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4O05_04745 PF00753 Metallo-beta-lactamase superfamily E4O05_04760 PF00468 Ribosomal protein L34 E4O05_04765 PF00825 Ribonuclease P E4O05_04770 PF01809 Putative membrane protein insertion efficiency factor E4O05_04775 PF02096 60Kd inner membrane protein E4O05_04775 PF14849 YidC periplasmic domain E4O05_04780 PF14804 Jag N-terminus E4O05_04780 PF01424 R3H domain E4O05_04790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4O05_04800 PF03186 CobD/Cbib protein E4O05_04805 PF00574 Clp protease E4O05_04835 PF02446 4-alpha-glucanotransferase E4O05_04845 PF01820 D-ala D-ala ligase N-terminus E4O05_04845 PF07478 D-ala D-ala ligase C-terminus E4O05_04855 PF02654 Cobalamin-5-phosphate synthase E4O05_04865 PF07730 Histidine kinase E4O05_04880 PF00005 ABC transporter E4O05_04895 PF05175 Methyltransferase small domain E4O05_04900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O05_04905 PF08534 Redoxin E4O05_04915 PF12801 4Fe-4S binding domain E4O05_04915 PF04205 FMN-binding domain E4O05_04925 PF04073 Aminoacyl-tRNA editing domain E4O05_04930 PF01032 FecCD transport family E4O05_04945 PF02599 Global regulator protein family E4O05_04950 PF02623 FliW protein E4O05_04955 PF00669 Bacterial flagellin N-terminal helical region E4O05_04955 PF00700 Bacterial flagellin C-terminal helical region E4O05_04955 PF07196 Flagellin hook IN motif E4O05_04960 PF07196 Flagellin hook IN motif E4O05_04960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O05_04980 PF02545 Maf-like protein E4O05_04985 PF00318 Ribosomal protein S2 E4O05_04990 PF00889 Elongation factor TS E4O05_04995 PF01765 Ribosome recycling factor E4O05_05000 PF01255 Putative undecaprenyl diphosphate synthase E4O05_05010 PF13288 DXP reductoisomerase C-terminal domain E4O05_05010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4O05_05010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4O05_05015 PF02163 Peptidase family M50 E4O05_05015 PF17820 PDZ domain E4O05_05020 PF00890 FAD binding domain E4O05_05020 PF04205 FMN-binding domain E4O05_05025 PF08264 Anticodon-binding domain of tRNA E4O05_05025 PF00133 tRNA synthetases class I (I, L, M and V) E4O05_05025 PF13603 Leucyl-tRNA synthetase, Domain 2 E4O05_05025 PF09334 tRNA synthetases class I (M) E4O05_05030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_05030 PF00672 HAMP domain E4O05_05030 PF02743 Cache domain E4O05_05035 PF00005 ABC transporter E4O05_05035 PF17755 UvrA DNA-binding domain E4O05_05035 PF17760 UvrA interaction domain E4O05_05045 PF17674 HHH domain E4O05_05045 PF00575 S1 RNA binding domain E4O05_05045 PF09371 Tex-like protein N-terminal domain E4O05_05045 PF16921 Tex protein YqgF-like domain E4O05_05060 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O05_05060 PF13654 AAA domain E4O05_05065 PF02601 Exonuclease VII, large subunit E4O05_05065 PF13742 OB-fold nucleic acid binding domain E4O05_05075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4O05_05075 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E4O05_05085 PF16811 TRAP transporter T-component E4O05_05095 PF02310 B12 binding domain E4O05_05100 PF13941 MutL protein E4O05_05105 PF01783 Ribosomal L32p protein family E4O05_05110 PF00550 Phosphopantetheine attachment site E4O05_05115 PF00035 Double-stranded RNA binding motif E4O05_05115 PF14622 Ribonuclease-III-like E4O05_05120 PF00011 Hsp20/alpha crystallin family E4O05_05130 PF13735 tRNA nucleotidyltransferase domain 2 putative E4O05_05130 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O05_05130 PF01743 Poly A polymerase head domain E4O05_05135 PF01544 CorA-like Mg2+ transporter protein E4O05_05140 PF09820 Predicted AAA-ATPase E4O05_05140 PF08011 PD-(D/E)XK nuclease superfamily E4O05_05145 PF02719 Polysaccharide biosynthesis protein E4O05_05150 PF01687 Riboflavin kinase E4O05_05150 PF06574 FAD synthetase E4O05_05155 PF00312 Ribosomal protein S15 E4O05_05160 PF01138 3' exoribonuclease family, domain 1 E4O05_05160 PF03725 3' exoribonuclease family, domain 2 E4O05_05160 PF00575 S1 RNA binding domain E4O05_05160 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4O05_05160 PF00013 KH domain E4O05_05165 PF00692 dUTPase E4O05_05180 PF04304 Protein of unknown function (DUF454) E4O05_05185 PF11756 Nitrous oxide-stimulated promoter E4O05_05190 PF00164 Ribosomal protein S12/S23 E4O05_05195 PF00177 Ribosomal protein S7p/S5e E4O05_05200 PF00679 Elongation factor G C-terminus E4O05_05200 PF14492 Elongation Factor G, domain II E4O05_05200 PF03764 Elongation factor G, domain IV E4O05_05200 PF00009 Elongation factor Tu GTP binding domain E4O05_05200 PF03144 Elongation factor Tu domain 2 E4O05_05215 PF00301 Rubredoxin E4O05_05225 PF13426 PAS domain E4O05_05225 PF02954 Bacterial regulatory protein, Fis family E4O05_05225 PF00158 Sigma-54 interaction domain E4O05_05230 PF00155 Aminotransferase class I and II E4O05_05235 PF03553 Na+/H+ antiporter family E4O05_05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_05240 PF00672 HAMP domain E4O05_05240 PF02743 Cache domain E4O05_05245 PF00664 ABC transporter transmembrane region E4O05_05245 PF00005 ABC transporter E4O05_05250 PF00005 ABC transporter E4O05_05250 PF00664 ABC transporter transmembrane region E4O05_05255 PF01554 MatE E4O05_05260 PF08011 PD-(D/E)XK nuclease superfamily E4O05_05260 PF09820 Predicted AAA-ATPase E4O05_05265 PF00005 ABC transporter E4O05_05270 PF00005 ABC transporter E4O05_05280 PF09334 tRNA synthetases class I (M) E4O05_05280 PF01588 Putative tRNA binding domain E4O05_05290 PF00005 ABC transporter E4O05_05290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_05295 PF00005 ABC transporter E4O05_05295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_05300 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_05300 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O05_05305 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_05310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O05_05320 PF01613 Flavin reductase like domain E4O05_05320 PF00753 Metallo-beta-lactamase superfamily E4O05_05335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4O05_05340 PF00398 Ribosomal RNA adenine dimethylase E4O05_05350 PF00849 RNA pseudouridylate synthase E4O05_05355 PF01479 S4 domain E4O05_05355 PF00849 RNA pseudouridylate synthase E4O05_05360 PF08245 Mur ligase middle domain E4O05_05360 PF02875 Mur ligase family, glutamate ligase domain E4O05_05365 PF01225 Mur ligase family, catalytic domain E4O05_05365 PF08245 Mur ligase middle domain E4O05_05365 PF02875 Mur ligase family, glutamate ligase domain E4O05_05370 PF03755 YicC-like family, N-terminal region E4O05_05370 PF08340 Domain of unknown function (DUF1732) E4O05_05390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O05_05390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O05_05390 PF03129 Anticodon binding domain E4O05_05405 PF16258 Domain of unknown function (DUF4912) E4O05_05415 PF01168 Alanine racemase, N-terminal domain E4O05_05415 PF00842 Alanine racemase, C-terminal domain E4O05_05420 PF02401 LytB protein E4O05_05430 PF09820 Predicted AAA-ATPase E4O05_05430 PF08011 PD-(D/E)XK nuclease superfamily E4O05_05445 PF06803 Protein of unknown function (DUF1232) E4O05_05505 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4O05_05510 PF02033 Ribosome-binding factor A E4O05_05515 PF00009 Elongation factor Tu GTP binding domain E4O05_05515 PF11987 Translation-initiation factor 2 E4O05_05515 PF04760 Translation initiation factor IF-2, N-terminal region E4O05_05520 PF13184 NusA-like KH domain E4O05_05520 PF00575 S1 RNA binding domain E4O05_05520 PF08529 NusA N-terminal domain E4O05_05525 PF17384 RimP C-terminal SH3 domain E4O05_05525 PF02576 RimP N-terminal domain E4O05_05530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4O05_05530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4O05_05545 PF05191 Adenylate kinase, active site lid E4O05_05575 PF01212 Beta-eliminating lyase E4O05_05595 PF01740 STAS domain E4O05_05635 PF02390 Putative methyltransferase E4O05_05640 PF01264 Chorismate synthase E4O05_05655 PF13808 DDE_Tnp_1-associated E4O05_05655 PF01609 Transposase DDE domain E4O05_05660 PF00118 TCP-1/cpn60 chaperonin family E4O05_05675 PF02233 NAD(P) transhydrogenase beta subunit E4O05_05685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4O05_05685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4O05_05685 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4O05_05720 PF00326 Prolyl oligopeptidase family E4O05_05720 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O05_05725 PF02381 MraZ protein, putative antitoxin-like E4O05_05730 PF01795 MraW methylase family E4O05_05740 PF08245 Mur ligase middle domain E4O05_05740 PF02875 Mur ligase family, glutamate ligase domain E4O05_05740 PF01225 Mur ligase family, catalytic domain E4O05_05745 PF01098 Cell cycle protein E4O05_05755 PF02491 SHS2 domain inserted in FTSA E4O05_05760 PF00091 Tubulin/FtsZ family, GTPase domain E4O05_05760 PF12327 FtsZ family, C-terminal domain E4O05_05765 PF02899 Phage integrase, N-terminal SAM-like domain E4O05_05765 PF00589 Phage integrase family E4O05_05775 PF02481 DNA recombination-mediator protein A E4O05_05775 PF17782 DprA winged helix domain E4O05_05780 PF01131 DNA topoisomerase E4O05_05780 PF01751 Toprim domain E4O05_05780 PF01396 Topoisomerase DNA binding C4 zinc finger E4O05_05785 PF02899 Phage integrase, N-terminal SAM-like domain E4O05_05785 PF00589 Phage integrase family E4O05_05790 PF00227 Proteasome subunit E4O05_05795 PF07724 AAA domain (Cdc48 subfamily) E4O05_05795 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_05800 PF00460 Flagella basal body rod protein E4O05_05805 PF00460 Flagella basal body rod protein E4O05_05805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O05_05810 PF02049 Flagellar hook-basal body complex protein FliE E4O05_05815 PF01514 Secretory protein of YscJ/FliF family E4O05_05815 PF08345 Flagellar M-ring protein C-terminal E4O05_05820 PF01706 FliG C-terminal domain E4O05_05820 PF14842 FliG N-terminal domain E4O05_05820 PF14841 FliG middle domain E4O05_05825 PF02108 Flagellar assembly protein FliH E4O05_05830 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O05_05830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O05_05830 PF18269 T3SS EscN ATPase C-terminal domain E4O05_05845 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O05_05855 PF00950 ABC 3 transport family E4O05_05860 PF00950 ABC 3 transport family E4O05_05865 PF00005 ABC transporter E4O05_05870 PF01297 Zinc-uptake complex component A periplasmic E4O05_05875 PF10282 Lactonase, 7-bladed beta-propeller E4O05_05890 PF00753 Metallo-beta-lactamase superfamily E4O05_05905 PF04101 Glycosyltransferase family 28 C-terminal domain E4O05_05905 PF03033 Glycosyltransferase family 28 N-terminal domain E4O05_05910 PF00121 Triosephosphate isomerase E4O05_05925 PF02562 PhoH-like protein E4O05_05930 PF01966 HD domain E4O05_05930 PF07697 7TM-HD extracellular E4O05_05930 PF07698 7TM receptor with intracellular HD hydrolase E4O05_05935 PF02130 Uncharacterized protein family UPF0054 E4O05_05940 PF00571 CBS domain E4O05_05940 PF03471 Transporter associated domain E4O05_05955 PF01882 Protein of unknown function DUF58 E4O05_05965 PF00092 von Willebrand factor type A domain E4O05_05985 PF00488 MutS domain V E4O05_05985 PF01713 Smr domain E4O05_06005 PF01235 Sodium:alanine symporter family E4O05_06010 PF12804 MobA-like NTP transferase domain E4O05_06015 PF02028 BCCT, betaine/carnitine/choline family transporter E4O05_06030 PF04551 GcpE protein E4O05_06035 PF00672 HAMP domain E4O05_06035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_06040 PF00586 AIR synthase related protein, N-terminal domain E4O05_06040 PF02769 AIR synthase related protein, C-terminal domain E4O05_06045 PF02844 Phosphoribosylglycinamide synthetase, N domain E4O05_06045 PF02843 Phosphoribosylglycinamide synthetase, C domain E4O05_06045 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4O05_06055 PF06044 Dam-replacing family E4O05_06055 PF17726 Dam-replacing HTH domain E4O05_06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_06070 PF00005 ABC transporter E4O05_06075 PF00005 ABC transporter E4O05_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_06085 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_06085 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O05_06090 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_06095 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O05_06095 PF02256 Iron hydrogenase small subunit E4O05_06095 PF12838 4Fe-4S dicluster domain E4O05_06100 PF09820 Predicted AAA-ATPase E4O05_06100 PF08011 PD-(D/E)XK nuclease superfamily E4O05_06105 PF04260 Protein of unknown function (DUF436) E4O05_06110 PF00586 AIR synthase related protein, N-terminal domain E4O05_06110 PF02769 AIR synthase related protein, C-terminal domain E4O05_06110 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4O05_06175 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system E4O05_06175 PF01381 Helix-turn-helix E4O05_06200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_06200 PF00672 HAMP domain E4O05_06200 PF02743 Cache domain E4O05_06215 PF00270 DEAD/DEAH box helicase E4O05_06215 PF02559 CarD-like/TRCF domain E4O05_06215 PF00271 Helicase conserved C-terminal domain E4O05_06215 PF03461 TRCF domain E4O05_06215 PF17757 UvrB interaction domain E4O05_06220 PF00005 ABC transporter E4O05_06245 PF01523 Putative modulator of DNA gyrase E4O05_06250 PF00381 PTS HPr component phosphorylation site E4O05_06255 PF07475 HPr Serine kinase C-terminal domain E4O05_06255 PF02603 HPr Serine kinase N terminus E4O05_06265 PF01476 LysM domain E4O05_06265 PF05257 CHAP domain E4O05_06285 PF02463 RecF/RecN/SMC N terminal domain E4O05_06310 PF00456 Transketolase, thiamine diphosphate binding domain E4O05_06310 PF02779 Transketolase, pyrimidine binding domain E4O05_06315 PF10502 Signal peptidase, peptidase S26 E4O05_06320 PF03717 Penicillin-binding Protein dimerisation domain E4O05_06320 PF00905 Penicillin binding protein transpeptidase domain E4O05_06345 PF03772 Competence protein E4O05_06345 PF13567 Domain of unknown function (DUF4131) E4O05_06345 PF00753 Metallo-beta-lactamase superfamily E4O05_06350 PF09186 Domain of unknown function (DUF1949) E4O05_06350 PF01205 Uncharacterized protein family UPF0029 E4O05_06375 PF03477 ATP cone domain E4O05_06385 PF01145 SPFH domain / Band 7 family E4O05_06390 PF01145 SPFH domain / Band 7 family E4O05_06400 PF03062 MBOAT, membrane-bound O-acyltransferase family E4O05_06410 PF00288 GHMP kinases N terminal domain E4O05_06410 PF08544 GHMP kinases C terminal E4O05_06415 PF04026 SpoVG E4O05_06425 PF14693 Ribosomal protein TL5, C-terminal domain E4O05_06425 PF01386 Ribosomal L25p family E4O05_06430 PF01171 PP-loop family E4O05_06440 PF17820 PDZ domain E4O05_06440 PF13180 PDZ domain E4O05_06460 PF08275 DNA primase catalytic core, N-terminal domain E4O05_06460 PF01807 CHC2 zinc finger E4O05_06465 PF03979 Sigma-70 factor, region 1.1 E4O05_06465 PF00140 Sigma-70 factor, region 1.2 E4O05_06465 PF04542 Sigma-70 region 2 E4O05_06465 PF04539 Sigma-70 region 3 E4O05_06465 PF04545 Sigma-70, region 4 E4O05_06500 PF03717 Penicillin-binding Protein dimerisation domain E4O05_06500 PF00905 Penicillin binding protein transpeptidase domain E4O05_06505 PF01098 Cell cycle protein E4O05_06520 PF01263 Aldose 1-epimerase E4O05_06530 PF00860 Permease family E4O05_06540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4O05_06555 PF03484 tRNA synthetase B5 domain E4O05_06555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4O05_06570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O05_06585 PF13186 Iron-sulfur cluster-binding domain E4O05_06600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O05_06600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O05_06605 PF00465 Iron-containing alcohol dehydrogenase E4O05_06610 PF05491 RuvB C-terminal winged helix domain E4O05_06610 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O05_06610 PF17864 RuvB AAA lid domain E4O05_06615 PF10672 S-adenosylmethionine-dependent methyltransferase E4O05_06620 PF02629 CoA binding domain E4O05_06620 PF06971 Putative DNA-binding protein N-terminus E4O05_06625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4O05_06625 PF02779 Transketolase, pyrimidine binding domain E4O05_06625 PF02780 Transketolase, C-terminal domain E4O05_06630 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4O05_06640 PF01648 4'-phosphopantetheinyl transferase superfamily E4O05_06655 PF00392 Bacterial regulatory proteins, gntR family E4O05_06660 PF01043 SecA preprotein cross-linking domain E4O05_06660 PF07517 SecA DEAD-like domain E4O05_06660 PF02810 SEC-C motif E4O05_06660 PF07516 SecA Wing and Scaffold domain E4O05_06665 PF00551 Formyl transferase E4O05_06670 PF02142 MGS-like domain E4O05_06670 PF01808 AICARFT/IMPCHase bienzyme E4O05_06685 PF07650 KH domain E4O05_06685 PF01926 50S ribosome-binding GTPase E4O05_06690 PF04060 Putative Fe-S cluster E4O05_06695 PF06421 GTP-binding protein LepA C-terminus E4O05_06695 PF00679 Elongation factor G C-terminus E4O05_06695 PF00009 Elongation factor Tu GTP binding domain E4O05_06695 PF14492 Elongation Factor G, domain II E4O05_06695 PF03144 Elongation factor Tu domain 2 E4O05_06700 PF05525 Branched-chain amino acid transport protein E4O05_06715 PF04055 Radical SAM superfamily E4O05_06715 PF00919 Uncharacterized protein family UPF0004 E4O05_06730 PF00232 Glycosyl hydrolase family 1 E4O05_06750 PF00005 ABC transporter E4O05_06750 PF12848 ABC transporter E4O05_06760 PF13180 PDZ domain E4O05_06760 PF03572 Peptidase family S41 E4O05_06765 PF04452 RNA methyltransferase E4O05_06785 PF00675 Insulinase (Peptidase family M16) E4O05_06785 PF05193 Peptidase M16 inactive domain E4O05_06785 PF08367 Peptidase M16C associated E4O05_06790 PF02075 Crossover junction endodeoxyribonuclease RuvC E4O05_06795 PF01330 RuvA N terminal domain E4O05_06830 PF03553 Na+/H+ antiporter family E4O05_06830 PF13726 Na+-H+ antiporter family E4O05_06850 PF00005 ABC transporter E4O05_06875 PF13495 Phage integrase, N-terminal SAM-like domain E4O05_06875 PF00589 Phage integrase family E4O05_07025 PF01209 ubiE/COQ5 methyltransferase family E4O05_07150 PF01880 Desulfoferrodoxin E4O05_07150 PF06397 Desulfoferrodoxin, N-terminal domain E4O05_07155 PF16363 GDP-mannose 4,6 dehydratase E4O05_07160 PF00829 Ribosomal prokaryotic L21 protein E4O05_07170 PF01016 Ribosomal L27 protein E4O05_07175 PF01018 GTP1/OBG E4O05_07175 PF01926 50S ribosome-binding GTPase E4O05_07180 PF01467 Cytidylyltransferase-like E4O05_07195 PF02417 Chromate transporter E4O05_07200 PF02417 Chromate transporter E4O05_07215 PF00501 AMP-binding enzyme E4O05_07225 PF00905 Penicillin binding protein transpeptidase domain E4O05_07225 PF17092 Penicillin-binding protein OB-like domain E4O05_07225 PF00912 Transglycosylase E4O05_07235 PF04225 Opacity-associated protein A LysM-like domain E4O05_07235 PF01551 Peptidase family M23 E4O05_07245 PF00037 4Fe-4S binding domain E4O05_07255 PF03372 Endonuclease/Exonuclease/phosphatase family E4O05_07260 PF00557 Metallopeptidase family M24 E4O05_07265 PF00226 DnaJ domain E4O05_07265 PF01556 DnaJ C terminal domain E4O05_07265 PF00684 DnaJ central domain E4O05_07285 PF12626 Polymerase A arginine-rich C-terminus E4O05_07285 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O05_07285 PF01743 Poly A polymerase head domain E4O05_07295 PF01171 PP-loop family E4O05_07295 PF00117 Glutamine amidotransferase class-I E4O05_07295 PF00958 GMP synthase C terminal domain E4O05_07305 PF00162 Phosphoglycerate kinase E4O05_07310 PF01520 N-acetylmuramoyl-L-alanine amidase E4O05_07320 PF04620 Flagellar filament outer layer protein Flaa E4O05_07330 PF01649 Ribosomal protein S20 E4O05_07340 PF00795 Carbon-nitrogen hydrolase E4O05_07350 PF00994 Probable molybdopterin binding domain E4O05_07350 PF02464 Competence-damaged protein E4O05_07350 PF18146 Damage-inducible protein CinA KH domain E4O05_07375 PF00300 Histidine phosphatase superfamily (branch 1) E4O05_07380 PF07364 Metallopeptidase family M81 E4O05_07380 PF07171 MlrC C-terminus E4O05_07400 PF00005 ABC transporter E4O05_07415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O05_07420 PF01590 GAF domain E4O05_07420 PF00990 Diguanylate cyclase, GGDEF domain E4O05_07420 PF00360 Phytochrome region E4O05_07420 PF00563 EAL domain E4O05_07425 PF00156 Phosphoribosyl transferase domain E4O05_07430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O05_07430 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O05_07430 PF16886 ATPsynthase alpha/beta subunit N-term extension E4O05_07435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O05_07435 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O05_07440 PF01813 ATP synthase subunit D E4O05_07455 PF01250 Ribosomal protein S6 E4O05_07460 PF00436 Single-strand binding protein family E4O05_07465 PF01084 Ribosomal protein S18 E4O05_07470 PF03948 Ribosomal protein L9, C-terminal domain E4O05_07470 PF01281 Ribosomal protein L9, N-terminal domain E4O05_07475 PF07724 AAA domain (Cdc48 subfamily) E4O05_07475 PF10431 C-terminal, D2-small domain, of ClpB protein E4O05_07475 PF06689 ClpX C4-type zinc finger E4O05_07480 PF00574 Clp protease E4O05_07485 PF05697 Bacterial trigger factor protein (TF) E4O05_07485 PF05698 Bacterial trigger factor protein (TF) C-terminus E4O05_07485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O05_07505 PF00155 Aminotransferase class I and II E4O05_07515 PF01008 Initiation factor 2 subunit family E4O05_07535 PF03796 DnaB-like helicase C terminal domain E4O05_07535 PF00772 DnaB-like helicase N terminal domain E4O05_07570 PF01411 tRNA synthetases class II (A) E4O05_07570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O05_07575 PF13145 PPIC-type PPIASE domain E4O05_07580 PF01029 NusB family E4O05_07595 PF00271 Helicase conserved C-terminal domain E4O05_07595 PF04408 Helicase associated domain (HA2) E4O05_07595 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4O05_07595 PF00270 DEAD/DEAH box helicase E4O05_07600 PF08011 PD-(D/E)XK nuclease superfamily E4O05_07600 PF09820 Predicted AAA-ATPase E4O05_07610 PF02632 BioY family E4O05_07615 PF00005 ABC transporter E4O05_07620 PF02361 Cobalt transport protein E4O05_07635 PF01327 Polypeptide deformylase E4O05_07640 PF02911 Formyl transferase, C-terminal domain E4O05_07640 PF00551 Formyl transferase E4O05_07645 PF03793 PASTA domain E4O05_07655 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4O05_07660 PF08501 Shikimate dehydrogenase substrate binding domain E4O05_07660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4O05_07660 PF01488 Shikimate / quinate 5-dehydrogenase E4O05_07670 PF01121 Dephospho-CoA kinase E4O05_07675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4O05_07675 PF01612 3'-5' exonuclease E4O05_07675 PF00476 DNA polymerase family A E4O05_07675 PF01367 5'-3' exonuclease, C-terminal SAM fold E4O05_07685 PF06857 Malonate decarboxylase delta subunit (MdcD) E4O05_07690 PF03328 HpcH/HpaI aldolase/citrate lyase family E4O05_07695 PF04223 Citrate lyase, alpha subunit (CitF) E4O05_07710 PF04851 Type III restriction enzyme, res subunit E4O05_07710 PF08774 VRR-NUC domain E4O05_07720 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_07720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O05_07725 PF01571 Aminomethyltransferase folate-binding domain E4O05_07725 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4O05_07730 PF01597 Glycine cleavage H-protein E4O05_07735 PF02347 Glycine cleavage system P-protein E4O05_07740 PF02347 Glycine cleavage system P-protein E4O05_07760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O05_07760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O05_07795 PF00271 Helicase conserved C-terminal domain E4O05_07795 PF00270 DEAD/DEAH box helicase E4O05_07795 PF08148 DSHCT (NUC185) domain E4O05_07805 PF02463 RecF/RecN/SMC N terminal domain E4O05_07820 PF01888 CbiD E4O05_07825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O05_07825 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_07830 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O05_07830 PF02256 Iron hydrogenase small subunit E4O05_07830 PF00037 4Fe-4S binding domain E4O05_07830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4O05_07835 PF00005 ABC transporter E4O05_07835 PF12848 ABC transporter E4O05_07840 PF01513 ATP-NAD kinase E4O05_07850 PF01584 CheW-like domain E4O05_07855 PF00579 tRNA synthetases class I (W and Y) E4O05_07860 PF02938 GAD domain E4O05_07860 PF00152 tRNA synthetases class II (D, K and N) E4O05_07860 PF01336 OB-fold nucleic acid binding domain E4O05_07875 PF08323 Starch synthase catalytic domain E4O05_07875 PF00534 Glycosyl transferases group 1 E4O05_07910 PF00919 Uncharacterized protein family UPF0004 E4O05_07910 PF01938 TRAM domain E4O05_07910 PF04055 Radical SAM superfamily E4O05_07915 PF04055 Radical SAM superfamily E4O05_07920 PF03099 Biotin/lipoate A/B protein ligase family E4O05_07920 PF10437 Bacterial lipoate protein ligase C-terminus E4O05_07925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_07925 PF00005 ABC transporter E4O05_07930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_07930 PF00005 ABC transporter E4O05_07935 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_07935 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O05_07940 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_07945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O05_07950 PF00365 Phosphofructokinase E4O05_07955 PF13662 Toprim domain E4O05_07955 PF02132 RecR protein E4O05_07960 PF02575 YbaB/EbfC DNA-binding family E4O05_07965 PF01351 Ribonuclease HII E4O05_07985 PF02618 YceG-like family E4O05_08000 PF03692 Putative zinc- or iron-chelating domain E4O05_08020 PF00533 BRCA1 C Terminus (BRCT) domain E4O05_08020 PF01653 NAD-dependent DNA ligase adenylation domain E4O05_08020 PF03120 NAD-dependent DNA ligase OB-fold domain E4O05_08030 PF00348 Polyprenyl synthetase E4O05_08040 PF13277 YmdB-like protein E4O05_08095 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E4O05_08095 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4O05_08100 PF08218 Citrate lyase ligase C-terminal domain E4O05_08105 PF05681 Fumarate hydratase (Fumerase) E4O05_08105 PF05683 Fumarase C-terminus E4O05_08110 PF05681 Fumarate hydratase (Fumerase) E4O05_08120 PF01842 ACT domain E4O05_08120 PF03315 Serine dehydratase beta chain E4O05_08125 PF03313 Serine dehydratase alpha chain E4O05_08135 PF01197 Ribosomal protein L31 E4O05_08140 PF07498 Rho termination factor, N-terminal domain E4O05_08140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O05_08140 PF07497 Rho termination factor, RNA-binding domain E4O05_08155 PF02896 PEP-utilising enzyme, TIM barrel domain E4O05_08155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4O05_08155 PF00391 PEP-utilising enzyme, mobile domain E4O05_08165 PF10397 Adenylosuccinate lyase C-terminus E4O05_08165 PF00206 Lyase E4O05_08170 PF00072 Response regulator receiver domain E4O05_08170 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_08185 PF03781 Sulfatase-modifying factor enzyme 1 E4O05_08205 PF13525 Outer membrane lipoprotein E4O05_08215 PF06470 SMC proteins Flexible Hinge Domain E4O05_08215 PF02463 RecF/RecN/SMC N terminal domain E4O05_08225 PF00072 Response regulator receiver domain E4O05_08235 PF01584 CheW-like domain E4O05_08240 PF01584 CheW-like domain E4O05_08240 PF02895 Signal transducing histidine kinase, homodimeric domain E4O05_08240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_08240 PF01627 Hpt domain E4O05_08240 PF07194 P2 response regulator binding domain E4O05_08255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4O05_08255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4O05_08260 PF01709 Transcriptional regulator E4O05_08270 PF00557 Metallopeptidase family M24 E4O05_08270 PF01321 Creatinase/Prolidase N-terminal domain E4O05_08295 PF00700 Bacterial flagellin C-terminal helical region E4O05_08295 PF00669 Bacterial flagellin N-terminal helical region E4O05_08300 PF00700 Bacterial flagellin C-terminal helical region E4O05_08300 PF00669 Bacterial flagellin N-terminal helical region E4O05_08310 PF07195 Flagellar hook-associated protein 2 C-terminus E4O05_08310 PF02465 Flagellar hook-associated protein 2 N-terminus E4O05_08325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4O05_08335 PF00672 HAMP domain E4O05_08335 PF01966 HD domain E4O05_08340 PF04055 Radical SAM superfamily E4O05_08340 PF06969 HemN C-terminal domain E4O05_08345 PF10502 Signal peptidase, peptidase S26 E4O05_08350 PF01668 SmpB protein E4O05_08380 PF01973 Protein of unknown function DUF115 E4O05_08405 PF00005 ABC transporter E4O05_08415 PF07495 Y_Y_Y domain E4O05_08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_08415 PF00512 His Kinase A (phospho-acceptor) domain E4O05_08415 PF12833 Helix-turn-helix domain E4O05_08415 PF07494 Two component regulator propeller E4O05_08415 PF00072 Response regulator receiver domain E4O05_08420 PF00072 Response regulator receiver domain E4O05_08420 PF00486 Transcriptional regulatory protein, C terminal E4O05_08440 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4O05_08445 PF16874 Glycosyl hydrolase family 36 C-terminal domain E4O05_08445 PF16875 Glycosyl hydrolase family 36 N-terminal domain E4O05_08455 PF00488 MutS domain V E4O05_08455 PF01713 Smr domain E4O05_08460 PF03193 RsgA GTPase E4O05_08460 PF16745 RsgA N-terminal domain E4O05_08465 PF01177 Asp/Glu/Hydantoin racemase E4O05_08485 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4O05_08485 PF00753 Metallo-beta-lactamase superfamily E4O05_08485 PF10996 Beta-Casp domain E4O05_08490 PF00588 SpoU rRNA Methylase family E4O05_08490 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O05_08495 PF13393 Histidyl-tRNA synthetase E4O05_08500 PF16363 GDP-mannose 4,6 dehydratase E4O05_08505 PF04321 RmlD substrate binding domain E4O05_08510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E4O05_08515 PF00483 Nucleotidyl transferase E4O05_08535 PF00005 ABC transporter E4O05_08535 PF00664 ABC transporter transmembrane region E4O05_08545 PF04991 LicD family E4O05_08560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4O05_08560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4O05_08560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4O05_08575 PF02350 UDP-N-acetylglucosamine 2-epimerase E4O05_08590 PF02911 Formyl transferase, C-terminal domain E4O05_08590 PF00551 Formyl transferase E4O05_08620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O05_08645 PF00132 Bacterial transferase hexapeptide (six repeats) E4O05_08685 PF01966 HD domain E4O05_08700 PF08239 Bacterial SH3 domain E4O05_08705 PF00005 ABC transporter E4O05_08705 PF16326 ABC transporter C-terminal domain E4O05_08705 PF12848 ABC transporter E4O05_08720 PF02540 NAD synthase E4O05_08725 PF01790 Prolipoprotein diacylglyceryl transferase E4O05_08735 PF10609 NUBPL iron-transfer P-loop NTPase E4O05_08765 PF03116 NQR2, RnfD, RnfE family E4O05_08770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O05_08770 PF13237 4Fe-4S dicluster domain E4O05_08770 PF13375 RnfC Barrel sandwich hybrid domain E4O05_08770 PF10531 SLBB domain E4O05_08785 PF00849 RNA pseudouridylate synthase E4O05_08785 PF01479 S4 domain E4O05_08800 PF00403 Heavy-metal-associated domain E4O05_08805 PF01022 Bacterial regulatory protein, arsR family E4O05_08810 PF01991 ATP synthase (E/31 kDa) subunit E4O05_08835 PF01467 Cytidylyltransferase-like E4O05_08850 PF00773 RNB domain E4O05_08860 PF01256 Carbohydrate kinase E4O05_08860 PF03853 YjeF-related protein N-terminus E4O05_08865 PF02151 UvrB/uvrC motif E4O05_08865 PF12344 Ultra-violet resistance protein B E4O05_08865 PF17757 UvrB interaction domain E4O05_08865 PF04851 Type III restriction enzyme, res subunit E4O05_08865 PF00271 Helicase conserved C-terminal domain E4O05_08870 PF00005 ABC transporter E4O05_08930 PF00005 ABC transporter E4O05_08945 PF00005 ABC transporter E4O05_08955 PF08279 HTH domain E4O05_08955 PF13280 WYL domain E4O05_08960 PF00133 tRNA synthetases class I (I, L, M and V) E4O05_08960 PF10458 Valyl tRNA synthetase tRNA binding arm E4O05_08960 PF08264 Anticodon-binding domain of tRNA E4O05_08975 PF00163 Ribosomal protein S4/S9 N-terminal domain E4O05_08975 PF01479 S4 domain E4O05_09005 PF02653 Branched-chain amino acid transport system / permease component E4O05_09010 PF02653 Branched-chain amino acid transport system / permease component E4O05_09015 PF00005 ABC transporter E4O05_09025 PF12706 Beta-lactamase superfamily domain E4O05_09025 PF00753 Metallo-beta-lactamase superfamily E4O05_09055 PF00009 Elongation factor Tu GTP binding domain E4O05_09055 PF03144 Elongation factor Tu domain 2 E4O05_09055 PF09105 Elongation factor SelB, winged helix E4O05_09055 PF09106 Elongation factor SelB, winged helix E4O05_09055 PF09107 Elongation factor SelB, winged helix E4O05_09060 PF02690 Na+/Pi-cotransporter E4O05_09065 PF00999 Sodium/hydrogen exchanger family E4O05_09070 PF17820 PDZ domain E4O05_09070 PF13180 PDZ domain E4O05_09080 PF01728 FtsJ-like methyltransferase E4O05_09085 PF02954 Bacterial regulatory protein, Fis family E4O05_09085 PF00072 Response regulator receiver domain E4O05_09085 PF00158 Sigma-54 interaction domain E4O05_09090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_09090 PF00512 His Kinase A (phospho-acceptor) domain E4O05_09090 PF00989 PAS fold E4O05_09095 PF09115 DNA polymerase III, delta subunit, C terminal E4O05_09100 PF02674 Colicin V production protein E4O05_09115 PF04101 Glycosyltransferase family 28 C-terminal domain E4O05_09115 PF03033 Glycosyltransferase family 28 N-terminal domain E4O05_09160 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_09160 PF00672 HAMP domain E4O05_09180 PF06733 DEAD_2 E4O05_09180 PF13307 Helicase C-terminal domain E4O05_09190 PF00691 OmpA family E4O05_09190 PF13488 Glycine zipper E4O05_09195 PF00206 Lyase E4O05_09195 PF10415 Fumarase C C-terminus E4O05_09205 PF03787 RAMP superfamily E4O05_09215 PF03787 RAMP superfamily E4O05_09225 PF18211 Csm1 subunit domain B E4O05_09225 PF01966 HD domain E4O05_09235 PF13808 DDE_Tnp_1-associated E4O05_09235 PF01609 Transposase DDE domain E4O05_09245 PF10431 C-terminal, D2-small domain, of ClpB protein E4O05_09245 PF02861 Clp amino terminal domain, pathogenicity island component E4O05_09245 PF17871 AAA lid domain E4O05_09245 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_09245 PF07724 AAA domain (Cdc48 subfamily) E4O05_09275 PF13538 UvrD-like helicase C-terminal domain E4O05_09300 PF09827 CRISPR associated protein Cas2 E4O05_09305 PF09827 CRISPR associated protein Cas2 E4O05_09310 PF01867 CRISPR associated protein Cas1 E4O05_09330 PF00962 Adenosine/AMP deaminase E4O05_09335 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4O05_09335 PF01078 Magnesium chelatase, subunit ChlI E4O05_09340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O05_09340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O05_09340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O05_09340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O05_09345 PF00929 Exonuclease E4O05_09360 PF01593 Flavin containing amine oxidoreductase E4O05_09395 PF03606 C4-dicarboxylate anaerobic carrier E4O05_09405 PF07687 Peptidase dimerisation domain E4O05_09405 PF01546 Peptidase family M20/M25/M40 E4O05_09575 PF00691 OmpA family E4O05_09580 PF01026 TatD related DNase E4O05_09590 PF03330 Lytic transglycolase E4O05_09600 PF13439 Glycosyltransferase Family 4 E4O05_09600 PF00534 Glycosyl transferases group 1 E4O05_09605 PF00483 Nucleotidyl transferase E4O05_09610 PF17871 AAA lid domain E4O05_09610 PF07724 AAA domain (Cdc48 subfamily) E4O05_09610 PF02861 Clp amino terminal domain, pathogenicity island component E4O05_09610 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_09610 PF10431 C-terminal, D2-small domain, of ClpB protein E4O05_09615 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4O05_09620 PF02151 UvrB/uvrC motif E4O05_09630 PF00005 ABC transporter E4O05_09635 PF12704 MacB-like periplasmic core domain E4O05_09635 PF02687 FtsX-like permease family E4O05_09645 PF00448 SRP54-type protein, GTPase domain E4O05_09645 PF02881 SRP54-type protein, helical bundle domain E4O05_09660 PF00472 RF-1 domain E4O05_09660 PF03462 PCRF domain E4O05_09675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O05_09685 PF13808 DDE_Tnp_1-associated E4O05_09685 PF01609 Transposase DDE domain E4O05_09700 PF00266 Aminotransferase class-V E4O05_09745 PF02421 Ferrous iron transport protein B E4O05_09745 PF07670 Nucleoside recognition E4O05_09745 PF07664 Ferrous iron transport protein B C terminus E4O05_09745 PF04023 FeoA domain E4O05_09745 PF17910 FeoB cytosolic helical domain E4O05_09750 PF04023 FeoA domain E4O05_09770 PF02609 Exonuclease VII small subunit E4O05_09775 PF01119 DNA mismatch repair protein, C-terminal domain E4O05_09775 PF08676 MutL C terminal dimerisation domain E4O05_09780 PF01042 Endoribonuclease L-PSP E4O05_09805 PF04055 Radical SAM superfamily E4O05_09810 PF08448 PAS fold E4O05_09810 PF08447 PAS fold E4O05_09810 PF00990 Diguanylate cyclase, GGDEF domain E4O05_09810 PF00563 EAL domain E4O05_09830 PF00158 Sigma-54 interaction domain E4O05_09830 PF00072 Response regulator receiver domain E4O05_09830 PF02954 Bacterial regulatory protein, Fis family E4O05_09835 PF00575 S1 RNA binding domain E4O05_09850 PF00588 SpoU rRNA Methylase family E4O05_09855 PF00696 Amino acid kinase family E4O05_09860 PF00226 DnaJ domain E4O05_09860 PF01556 DnaJ C terminal domain E4O05_09860 PF00684 DnaJ central domain E4O05_09865 PF01176 Translation initiation factor 1A / IF-1 E4O05_09870 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4O05_09875 PF02978 Signal peptide binding domain E4O05_09875 PF00448 SRP54-type protein, GTPase domain E4O05_09875 PF02881 SRP54-type protein, helical bundle domain E4O05_09880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4O05_09880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4O05_09885 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O05_09890 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O05_09900 PF00144 Beta-lactamase E4O05_09905 PF07075 Protein of unknown function (DUF1343) E4O05_09930 PF01979 Amidohydrolase family E4O05_09940 PF00270 DEAD/DEAH box helicase E4O05_09940 PF00271 Helicase conserved C-terminal domain E4O05_09945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4O05_09965 PF00005 ABC transporter E4O05_09965 PF13732 Domain of unknown function (DUF4162) E4O05_09970 PF00672 HAMP domain E4O05_09970 PF07228 Stage II sporulation protein E (SpoIIE) E4O05_09980 PF03687 Uncharacterised protein family (UPF0164) E4O05_09985 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O05_09990 PF00005 ABC transporter E4O05_10010 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4O05_10015 PF02677 Epoxyqueuosine reductase QueH E4O05_10025 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4O05_10030 PF02861 Clp amino terminal domain, pathogenicity island component E4O05_10030 PF10431 C-terminal, D2-small domain, of ClpB protein E4O05_10030 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_10030 PF07724 AAA domain (Cdc48 subfamily) E4O05_10030 PF17871 AAA lid domain E4O05_10035 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4O05_10060 PF01850 PIN domain E4O05_10075 PF01891 Cobalt uptake substrate-specific transmembrane region E4O05_10080 PF00005 ABC transporter E4O05_10115 PF00326 Prolyl oligopeptidase family E4O05_10115 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O05_10120 PF06832 Penicillin-Binding Protein C-terminus Family E4O05_10120 PF00912 Transglycosylase E4O05_10120 PF00905 Penicillin binding protein transpeptidase domain E4O05_10125 PF03313 Serine dehydratase alpha chain E4O05_10130 PF03781 Sulfatase-modifying factor enzyme 1 E4O05_10135 PF13808 DDE_Tnp_1-associated E4O05_10135 PF01609 Transposase DDE domain E4O05_10155 PF01476 LysM domain E4O05_10155 PF01464 Transglycosylase SLT domain E4O05_10165 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4O05_10170 PF05164 Cell division protein ZapA E4O05_10180 PF00453 Ribosomal protein L20 E4O05_10185 PF01632 Ribosomal protein L35 E4O05_10190 PF00707 Translation initiation factor IF-3, C-terminal domain E4O05_10190 PF05198 Translation initiation factor IF-3, N-terminal domain E4O05_10195 PF13808 DDE_Tnp_1-associated E4O05_10195 PF01609 Transposase DDE domain E4O05_10230 PF00005 ABC transporter E4O05_10240 PF09820 Predicted AAA-ATPase E4O05_10240 PF08011 PD-(D/E)XK nuclease superfamily E4O05_10245 PF13302 Acetyltransferase (GNAT) domain E4O05_10250 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4O05_10250 PF01189 16S rRNA methyltransferase RsmB/F E4O05_10250 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4O05_10255 PF04298 Putative neutral zinc metallopeptidase E4O05_10265 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O05_10275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O05_10275 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4O05_10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_10285 PF08241 Methyltransferase domain E4O05_10330 PF00654 Voltage gated chloride channel E4O05_10335 PF12631 MnmE helical domain E4O05_10335 PF01926 50S ribosome-binding GTPase E4O05_10335 PF10396 GTP-binding protein TrmE N-terminus E4O05_10340 PF01569 PAP2 superfamily E4O05_10350 PF14353 CpXC protein E4O05_10365 PF00501 AMP-binding enzyme E4O05_10370 PF17762 HTH domain found in ParB protein E4O05_10370 PF02195 ParB-like nuclease domain E4O05_10380 PF01551 Peptidase family M23 E4O05_10380 PF01476 LysM domain E4O05_10380 PF08525 Opacity-associated protein A N-terminal motif E4O05_10385 PF02272 DHHA1 domain E4O05_10385 PF17768 RecJ OB domain E4O05_10385 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4O05_10385 PF01368 DHH family E4O05_10390 PF00591 Glycosyl transferase family, a/b domain E4O05_10390 PF02885 Glycosyl transferase family, helical bundle domain E4O05_10390 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4O05_10395 PF00291 Pyridoxal-phosphate dependent enzyme E4O05_10395 PF14821 Threonine synthase N terminus E4O05_10405 PF00155 Aminotransferase class I and II E4O05_10430 PF00849 RNA pseudouridylate synthase E4O05_10430 PF01479 S4 domain E4O05_10440 PF10371 Domain of unknown function E4O05_10440 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O05_10440 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O05_10440 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O05_10440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O05_10445 PF01177 Asp/Glu/Hydantoin racemase E4O05_10450 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O05_10460 PF03553 Na+/H+ antiporter family E4O05_10465 PF13726 Na+-H+ antiporter family E4O05_10465 PF03553 Na+/H+ antiporter family E4O05_10470 PF01784 NIF3 (NGG1p interacting factor 3) E4O05_10480 PF10509 Galactokinase galactose-binding signature E4O05_10480 PF08544 GHMP kinases C terminal E4O05_10480 PF00288 GHMP kinases N terminal domain E4O05_10495 PF13847 Methyltransferase domain E4O05_10500 PF02653 Branched-chain amino acid transport system / permease component E4O05_10505 PF00005 ABC transporter E4O05_10510 PF13407 Periplasmic binding protein domain E4O05_10510 PF18610 Periplasmic binding protein domain E4O05_10520 PF10502 Signal peptidase, peptidase S26 E4O05_10530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O05_10530 PF04073 Aminoacyl-tRNA editing domain E4O05_10530 PF03129 Anticodon binding domain E4O05_10550 PF01297 Zinc-uptake complex component A periplasmic E4O05_10565 PF07687 Peptidase dimerisation domain E4O05_10565 PF01546 Peptidase family M20/M25/M40 E4O05_10575 PF00005 ABC transporter E4O05_10580 PF01032 FecCD transport family E4O05_10585 PF01497 Periplasmic binding protein E4O05_10590 PF05034 Methylaspartate ammonia-lyase N-terminus E4O05_10590 PF07476 Methylaspartate ammonia-lyase C-terminus E4O05_10595 PF06368 Methylaspartate mutase E chain (MutE) E4O05_10605 PF03932 CutC family E4O05_10615 PF00986 DNA gyrase B subunit, carboxyl terminus E4O05_10615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O05_10615 PF01751 Toprim domain E4O05_10615 PF00204 DNA gyrase B E4O05_10620 PF00899 ThiF family E4O05_10625 PF00953 Glycosyl transferase family 4 E4O05_10635 PF00860 Permease family E4O05_10655 PF02872 5'-nucleotidase, C-terminal domain E4O05_10655 PF17936 Bacterial Ig domain E4O05_10655 PF00149 Calcineurin-like phosphoesterase E4O05_10660 PF01136 Peptidase family U32 E4O05_10660 PF16325 Peptidase family U32 C-terminal domain E4O05_10665 PF07859 alpha/beta hydrolase fold E4O05_10670 PF00664 ABC transporter transmembrane region E4O05_10670 PF00005 ABC transporter E4O05_10675 PF01725 Ham1 family E4O05_10685 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4O05_10690 PF01416 tRNA pseudouridine synthase E4O05_10700 PF02146 Sir2 family E4O05_10705 PF08668 HDOD domain E4O05_10720 PF00152 tRNA synthetases class II (D, K and N) E4O05_10725 PF00005 ABC transporter E4O05_10725 PF02687 FtsX-like permease family E4O05_10725 PF12704 MacB-like periplasmic core domain E4O05_10730 PF00005 ABC transporter E4O05_10755 PF08011 PD-(D/E)XK nuclease superfamily E4O05_10755 PF09820 Predicted AAA-ATPase E4O05_10760 PF03819 MazG nucleotide pyrophosphohydrolase domain E4O05_10765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O05_10765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4O05_10770 PF02824 TGS domain E4O05_10770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O05_10770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O05_10770 PF03129 Anticodon binding domain E4O05_10780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4O05_10780 PF02542 YgbB family E4O05_10785 PF02542 YgbB family E4O05_10795 PF13419 Haloacid dehalogenase-like hydrolase E4O05_10800 PF00924 Mechanosensitive ion channel E4O05_10820 PF10509 Galactokinase galactose-binding signature E4O05_10820 PF08544 GHMP kinases C terminal E4O05_10825 PF00795 Carbon-nitrogen hydrolase E4O05_10830 PF00595 PDZ domain E4O05_10840 PF00072 Response regulator receiver domain E4O05_10845 PF02021 Uncharacterised protein family UPF0102 E4O05_10860 PF02403 Seryl-tRNA synthetase N-terminal domain E4O05_10860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O05_10880 PF00145 C-5 cytosine-specific DNA methylase E4O05_10885 PF09015 NgoMIV restriction enzyme E4O05_10890 PF00158 Sigma-54 interaction domain E4O05_10890 PF01590 GAF domain E4O05_10895 PF01168 Alanine racemase, N-terminal domain E4O05_10910 PF08011 PD-(D/E)XK nuclease superfamily E4O05_10910 PF09820 Predicted AAA-ATPase E4O05_10915 PF03006 Haemolysin-III related E4O05_10950 PF01551 Peptidase family M23 E4O05_10950 PF10145 Phage-related minor tail protein E4O05_10950 PF01464 Transglycosylase SLT domain E4O05_10960 PF04542 Sigma-70 region 2 E4O05_10960 PF08281 Sigma-70, region 4 E4O05_10975 PF00924 Mechanosensitive ion channel E4O05_10980 PF00072 Response regulator receiver domain E4O05_10980 PF00196 Bacterial regulatory proteins, luxR family E4O05_10990 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O05_11010 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_11010 PF00672 HAMP domain E4O05_11015 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_11015 PF07724 AAA domain (Cdc48 subfamily) E4O05_11015 PF17871 AAA lid domain E4O05_11015 PF02861 Clp amino terminal domain, pathogenicity island component E4O05_11015 PF10431 C-terminal, D2-small domain, of ClpB protein E4O05_11020 PF03806 AbgT putative transporter family E4O05_11030 PF13808 DDE_Tnp_1-associated E4O05_11030 PF01609 Transposase DDE domain E4O05_11060 PF00580 UvrD/REP helicase N-terminal domain E4O05_11060 PF13361 UvrD-like helicase C-terminal domain E4O05_11065 PF02073 Thermophilic metalloprotease (M29) E4O05_11070 PF10135 Rod binding protein E4O05_11075 PF00460 Flagella basal body rod protein E4O05_11075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O05_11080 PF00460 Flagella basal body rod protein E4O05_11080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O05_11085 PF00700 Bacterial flagellin C-terminal helical region E4O05_11085 PF00669 Bacterial flagellin N-terminal helical region E4O05_11090 PF00156 Phosphoribosyl transferase domain E4O05_11095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4O05_11095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4O05_11100 PF01226 Formate/nitrite transporter E4O05_11105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4O05_11105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4O05_11110 PF01204 Trehalase E4O05_11125 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4O05_11135 PF00830 Ribosomal L28 family E4O05_11140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O05_11145 PF00005 ABC transporter E4O05_11145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_11150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O05_11150 PF00005 ABC transporter E4O05_11155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O05_11160 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O05_11160 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_11165 PF00528 Binding-protein-dependent transport system inner membrane component E4O05_11170 PF01180 Dihydroorotate dehydrogenase E4O05_11180 PF01336 OB-fold nucleic acid binding domain E4O05_11180 PF00152 tRNA synthetases class II (D, K and N) E4O05_11185 PF07943 Penicillin-binding protein 5, C-terminal domain E4O05_11185 PF00768 D-alanyl-D-alanine carboxypeptidase E4O05_11190 PF04002 RadC-like JAB domain E4O05_11195 PF00156 Phosphoribosyl transferase domain E4O05_11200 PF00750 tRNA synthetases class I (R) E4O05_11200 PF05746 DALR anticodon binding domain E4O05_11200 PF03485 Arginyl tRNA synthetase N terminal domain E4O05_11205 PF09285 Elongation factor P, C-terminal E4O05_11205 PF08207 Elongation factor P (EF-P) KOW-like domain E4O05_11205 PF01132 Elongation factor P (EF-P) OB domain E4O05_11220 PF13277 YmdB-like protein E4O05_11230 PF11798 IMS family HHH motif E4O05_11230 PF00817 impB/mucB/samB family E4O05_11230 PF11799 impB/mucB/samB family C-terminal domain E4O05_11245 PF03102 NeuB family E4O05_11245 PF08666 SAF domain E4O05_11250 PF07009 NusG domain II E4O05_11255 PF01734 Patatin-like phospholipase E4O05_11260 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O05_11265 PF04536 TPM domain E4O05_11270 PF04011 LemA family E4O05_11275 PF02653 Branched-chain amino acid transport system / permease component E4O05_11280 PF02653 Branched-chain amino acid transport system / permease component E4O05_11285 PF00005 ABC transporter E4O05_11290 PF02608 ABC transporter substrate-binding protein PnrA-like E4O05_11345 PF03952 Enolase, N-terminal domain E4O05_11345 PF00113 Enolase, C-terminal TIM barrel domain E4O05_11350 PF00009 Elongation factor Tu GTP binding domain E4O05_11350 PF03764 Elongation factor G, domain IV E4O05_11350 PF00679 Elongation factor G C-terminus E4O05_11350 PF03144 Elongation factor Tu domain 2 E4O05_11350 PF14492 Elongation Factor G, domain II E4O05_11360 PF03781 Sulfatase-modifying factor enzyme 1 E4O05_11365 PF03781 Sulfatase-modifying factor enzyme 1 E4O05_11385 PF00501 AMP-binding enzyme E4O05_11385 PF13193 AMP-binding enzyme C-terminal domain E4O05_11390 PF00877 NlpC/P60 family E4O05_11400 PF01963 TraB family E4O05_11405 PF01170 Putative RNA methylase family UPF0020 E4O05_11405 PF02926 THUMP domain E4O05_11410 PF03979 Sigma-70 factor, region 1.1 E4O05_11410 PF04539 Sigma-70 region 3 E4O05_11410 PF04545 Sigma-70, region 4 E4O05_11410 PF00140 Sigma-70 factor, region 1.2 E4O05_11410 PF04542 Sigma-70 region 2 E4O05_11415 PF00166 Chaperonin 10 Kd subunit E4O05_11420 PF00871 Acetokinase family E4O05_11425 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O05_11430 PF01554 MatE E4O05_11435 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O05_11435 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O05_11440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O05_11440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O05_11445 PF00005 ABC transporter E4O05_11460 PF07687 Peptidase dimerisation domain E4O05_11460 PF01546 Peptidase family M20/M25/M40 E4O05_11465 PF00580 UvrD/REP helicase N-terminal domain E4O05_11465 PF13361 UvrD-like helicase C-terminal domain E4O05_11485 PF01245 Ribosomal protein L19 E4O05_11490 PF01746 tRNA (Guanine-1)-methyltransferase E4O05_11495 PF01782 RimM N-terminal domain E4O05_11505 PF00886 Ribosomal protein S16 E4O05_11515 PF02277 Phosphoribosyltransferase E4O05_11520 PF00005 ABC transporter E4O05_11525 PF00005 ABC transporter E4O05_11525 PF09383 NIL domain E4O05_11540 PF00849 RNA pseudouridylate synthase E4O05_11540 PF01479 S4 domain E4O05_11545 PF04079 Segregation and condensation complex subunit ScpB E4O05_11550 PF02616 Segregation and condensation protein ScpA E4O05_11555 PF00154 recA bacterial DNA recombination protein E4O05_11560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O05_11560 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O05_11580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O05_11580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O05_11580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O05_11580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O05_11585 PF02308 MgtC family E4O05_11600 PF00579 tRNA synthetases class I (W and Y) E4O05_11605 PF01479 S4 domain E4O05_11605 PF00849 RNA pseudouridylate synthase E4O05_11625 PF00596 Class II Aldolase and Adducin N-terminal domain E4O05_11630 PF00196 Bacterial regulatory proteins, luxR family E4O05_11630 PF00072 Response regulator receiver domain E4O05_11640 PF00380 Ribosomal protein S9/S16 E4O05_11645 PF00572 Ribosomal protein L13 E4O05_11655 PF17202 Single cache domain 3 E4O05_11655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_11655 PF00672 HAMP domain E4O05_11660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_11660 PF00672 HAMP domain E4O05_11660 PF02743 Cache domain E4O05_11665 PF02743 Cache domain E4O05_11665 PF00672 HAMP domain E4O05_11665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_11680 PF16314 Domain of unknown function (DUF4954) E4O05_11690 PF00391 PEP-utilising enzyme, mobile domain E4O05_11690 PF02896 PEP-utilising enzyme, TIM barrel domain E4O05_11705 PF13519 von Willebrand factor type A domain E4O05_11715 PF00581 Rhodanese-like domain E4O05_11715 PF17773 UPF0176 acylphosphatase like domain E4O05_11720 PF13375 RnfC Barrel sandwich hybrid domain E4O05_11720 PF10531 SLBB domain E4O05_11720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O05_11720 PF13237 4Fe-4S dicluster domain E4O05_11725 PF03116 NQR2, RnfD, RnfE family E4O05_11730 PF04205 FMN-binding domain E4O05_11735 PF02508 Rnf-Nqr subunit, membrane protein E4O05_11740 PF02508 Rnf-Nqr subunit, membrane protein E4O05_11750 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O05_11755 PF01134 Glucose inhibited division protein A E4O05_11755 PF13932 GidA associated domain E4O05_11760 PF01430 Hsp33 protein E4O05_11765 PF02570 Precorrin-8X methylmutase E4O05_11785 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system E4O05_11790 PF09820 Predicted AAA-ATPase E4O05_11790 PF08011 PD-(D/E)XK nuclease superfamily E4O05_11795 PF00005 ABC transporter E4O05_11795 PF00664 ABC transporter transmembrane region E4O05_11800 PF00664 ABC transporter transmembrane region E4O05_11800 PF00005 ABC transporter E4O05_11810 PF00005 ABC transporter E4O05_11815 PF00950 ABC 3 transport family E4O05_11825 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4O05_11845 PF02568 Thiamine biosynthesis protein (ThiI) E4O05_11845 PF02926 THUMP domain E4O05_11850 PF00793 DAHP synthetase I family E4O05_11855 PF09820 Predicted AAA-ATPase E4O05_11855 PF08011 PD-(D/E)XK nuclease superfamily E4O05_11860 PF02229 Transcriptional Coactivator p15 (PC4) E4O05_11865 PF01066 CDP-alcohol phosphatidyltransferase E4O05_11870 PF00342 Phosphoglucose isomerase E4O05_11875 PF01926 50S ribosome-binding GTPase E4O05_11885 PF00849 RNA pseudouridylate synthase E4O05_11905 PF00271 Helicase conserved C-terminal domain E4O05_11905 PF17191 RecG wedge domain E4O05_11905 PF00270 DEAD/DEAH box helicase E4O05_11910 PF00990 Diguanylate cyclase, GGDEF domain E4O05_11915 PF00990 Diguanylate cyclase, GGDEF domain E4O05_11930 PF17202 Single cache domain 3 E4O05_11930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_11930 PF00672 HAMP domain E4O05_11935 PF12169 DNA polymerase III subunits gamma and tau domain III E4O05_11950 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O05_11955 PF17773 UPF0176 acylphosphatase like domain E4O05_11955 PF12368 Rhodanase C-terminal E4O05_11955 PF00581 Rhodanese-like domain E4O05_11960 PF03880 DbpA RNA binding domain E4O05_11965 PF13426 PAS domain E4O05_11965 PF02954 Bacterial regulatory protein, Fis family E4O05_11965 PF00158 Sigma-54 interaction domain E4O05_11985 PF00834 Ribulose-phosphate 3 epimerase family E4O05_11995 PF02223 Thymidylate kinase E4O05_12005 PF01103 Surface antigen E4O05_12005 PF07244 Surface antigen variable number repeat E4O05_12015 PF05190 MutS family domain IV E4O05_12015 PF05192 MutS domain III E4O05_12015 PF05188 MutS domain II E4O05_12015 PF01624 MutS domain I E4O05_12015 PF00488 MutS domain V E4O05_12045 PF07670 Nucleoside recognition E4O05_12050 PF01175 Urocanase Rossmann-like domain E4O05_12050 PF17392 Urocanase C-terminal domain E4O05_12050 PF17391 Urocanase N-terminal domain E4O05_12055 PF02743 Cache domain E4O05_12055 PF00672 HAMP domain E4O05_12055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_12060 PF02743 Cache domain E4O05_12060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_12060 PF00672 HAMP domain E4O05_12075 PF04055 Radical SAM superfamily E4O05_12075 PF18693 TRAM domain E4O05_12075 PF00919 Uncharacterized protein family UPF0004 E4O05_12095 PF02424 ApbE family E4O05_12100 PF01252 Signal peptidase (SPase) II E4O05_12105 PF00027 Cyclic nucleotide-binding domain E4O05_12105 PF13545 Crp-like helix-turn-helix domain E4O05_12120 PF05958 tRNA (Uracil-5-)-methyltransferase E4O05_12135 PF01145 SPFH domain / Band 7 family E4O05_12140 PF01145 SPFH domain / Band 7 family E4O05_12165 PF00005 ABC transporter E4O05_12170 PF08543 Phosphomethylpyrimidine kinase E4O05_12180 PF01636 Phosphotransferase enzyme family E4O05_12190 PF00731 AIR carboxylase E4O05_12195 PF01259 SAICAR synthetase E4O05_12200 PF00106 short chain dehydrogenase E4O05_12205 PF00436 Single-strand binding protein family E4O05_12210 PF02699 Preprotein translocase subunit E4O05_12215 PF02355 Protein export membrane protein E4O05_12220 PF02355 Protein export membrane protein E4O05_12225 PF00266 Aminotransferase class-V E4O05_12235 PF01206 Sulfurtransferase TusA E4O05_12260 PF13784 Fic/DOC family N-terminal E4O05_12260 PF02661 Fic/DOC family E4O05_12265 PF01361 Tautomerase enzyme E4O05_12275 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O05_12275 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4O05_12275 PF00004 ATPase family associated with various cellular activities (AAA) E4O05_12285 PF01458 Uncharacterized protein family (UPF0051) E4O05_12290 PF00005 ABC transporter E4O05_12305 PF03390 2-hydroxycarboxylate transporter family E4O05_12340 PF00813 FliP family E4O05_12350 PF04509 CheC-like family E4O05_12350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O05_12355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O05_12355 PF02154 Flagellar motor switch protein FliM E4O05_12360 PF03748 Flagellar basal body-associated protein FliL E4O05_12365 PF00691 OmpA family E4O05_12365 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4O05_12370 PF01618 MotA/TolQ/ExbB proton channel family E4O05_12380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O05_12380 PF00460 Flagella basal body rod protein E4O05_12380 PF07559 Flagellar basal body protein FlaE E4O05_12385 PF03963 Flagellar hook capping protein - N-terminal region E4O05_12400 PF00588 SpoU rRNA Methylase family E4O05_12400 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O05_12405 PF13419 Haloacid dehalogenase-like hydrolase E4O05_12415 PF00571 CBS domain E4O05_12415 PF01769 Divalent cation transporter E4O05_12415 PF03448 MgtE intracellular N domain E4O05_12425 PF04452 RNA methyltransferase E4O05_12440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O05_12440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O05_12445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4O05_12445 PF14572 Phosphoribosyl synthetase-associated domain E4O05_12450 PF00990 Diguanylate cyclase, GGDEF domain E4O05_12455 PF00990 Diguanylate cyclase, GGDEF domain E4O05_12460 PF03193 RsgA GTPase E4O05_12470 PF01026 TatD related DNase E4O05_12475 PF01207 Dihydrouridine synthase (Dus) E4O05_12485 PF00892 EamA-like transporter family E4O05_12490 PF01420 Type I restriction modification DNA specificity domain E4O05_12495 PF02899 Phage integrase, N-terminal SAM-like domain E4O05_12495 PF00589 Phage integrase family E4O05_12500 PF01420 Type I restriction modification DNA specificity domain E4O05_12505 PF01420 Type I restriction modification DNA specificity domain E4O05_12510 PF13332 Hemagglutinin repeat E4O05_12510 PF02661 Fic/DOC family E4O05_12510 PF13018 Extended Signal Peptide of Type V secretion system E4O05_12510 PF03543 Yersinia/Haemophilus virulence surface antigen E4O05_12510 PF05860 haemagglutination activity domain E4O05_12515 PF02384 N-6 DNA Methylase E4O05_12520 PF04851 Type III restriction enzyme, res subunit E4O05_12520 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4O05_12520 PF00271 Helicase conserved C-terminal domain E4O05_12520 PF08463 EcoEI R protein C-terminal E4O05_12540 PF01926 50S ribosome-binding GTPase E4O05_12540 PF13167 GTP-binding GTPase N-terminal E4O05_12540 PF16360 GTP-binding GTPase Middle Region E4O05_12560 PF01551 Peptidase family M23 E4O05_12560 PF01476 LysM domain E4O05_12560 PF08525 Opacity-associated protein A N-terminal motif E4O05_12565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O05_12640 PF00561 alpha/beta hydrolase fold E4O05_12655 PF00664 ABC transporter transmembrane region E4O05_12655 PF00005 ABC transporter E4O05_12670 PF00664 ABC transporter transmembrane region E4O05_12670 PF00005 ABC transporter E4O05_12675 PF02743 Cache domain E4O05_12675 PF00672 HAMP domain E4O05_12675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O05_12690 PF17239 Family of unknown function (DUF5312) E4O05_12700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4O05_12700 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4O05_12700 PF02811 PHP domain E4O05_12700 PF14579 Helix-hairpin-helix motif E4O05_12705 PF08011 PD-(D/E)XK nuclease superfamily E4O05_12705 PF09820 Predicted AAA-ATPase