locus-tag class description E4O06_00005 PF00308 Bacterial dnaA protein E4O06_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4O06_00005 PF11638 DnaA N-terminal domain E4O06_00025 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4O06_00025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4O06_00025 PF14579 Helix-hairpin-helix motif E4O06_00025 PF02811 PHP domain E4O06_00035 PF17239 Family of unknown function (DUF5312) E4O06_00050 PF00664 ABC transporter transmembrane region E4O06_00050 PF00005 ABC transporter E4O06_00065 PF00664 ABC transporter transmembrane region E4O06_00065 PF00005 ABC transporter E4O06_00085 PF00561 alpha/beta hydrolase fold E4O06_00120 PF07687 Peptidase dimerisation domain E4O06_00120 PF01546 Peptidase family M20/M25/M40 E4O06_00125 PF00072 Response regulator receiver domain E4O06_00125 PF00486 Transcriptional regulatory protein, C terminal E4O06_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_00135 PF00005 ABC transporter E4O06_00180 PF08279 HTH domain E4O06_00180 PF13280 WYL domain E4O06_00195 PF00691 OmpA family E4O06_00200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O06_00200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O06_00200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O06_00200 PF10371 Domain of unknown function E4O06_00200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O06_00225 PF06418 CTP synthase N-terminus E4O06_00225 PF00117 Glutamine amidotransferase class-I E4O06_00235 PF00155 Aminotransferase class I and II E4O06_00240 PF00448 SRP54-type protein, GTPase domain E4O06_00245 PF10609 NUBPL iron-transfer P-loop NTPase E4O06_00255 PF04542 Sigma-70 region 2 E4O06_00255 PF04545 Sigma-70, region 4 E4O06_00255 PF04539 Sigma-70 region 3 E4O06_00285 PF14821 Threonine synthase N terminus E4O06_00285 PF00291 Pyridoxal-phosphate dependent enzyme E4O06_00315 PF00953 Glycosyl transferase family 4 E4O06_00320 PF01066 CDP-alcohol phosphatidyltransferase E4O06_00325 PF00464 Serine hydroxymethyltransferase E4O06_00340 PF00571 CBS domain E4O06_00340 PF00478 IMP dehydrogenase / GMP reductase domain E4O06_00345 PF00133 tRNA synthetases class I (I, L, M and V) E4O06_00345 PF08264 Anticodon-binding domain of tRNA E4O06_00365 PF11849 Domain of unknown function (DUF3369) E4O06_00370 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O06_00375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O06_00380 PF06180 Cobalt chelatase (CbiK) E4O06_00395 PF00392 Bacterial regulatory proteins, gntR family E4O06_00395 PF07702 UTRA domain E4O06_00400 PF00005 ABC transporter E4O06_00425 PF00005 ABC transporter E4O06_00425 PF00664 ABC transporter transmembrane region E4O06_00430 PF00571 CBS domain E4O06_00430 PF00005 ABC transporter E4O06_00440 PF04324 BFD-like [2Fe-2S] binding domain E4O06_00440 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_00445 PF01266 FAD dependent oxidoreductase E4O06_00455 PF12728 Helix-turn-helix domain E4O06_00455 PF02661 Fic/DOC family E4O06_00465 PF01432 Peptidase family M3 E4O06_00465 PF08439 Oligopeptidase F E4O06_00485 PF01641 SelR domain E4O06_00485 PF01625 Peptide methionine sulfoxide reductase E4O06_00505 PF02719 Polysaccharide biosynthesis protein E4O06_00535 PF00595 PDZ domain E4O06_00545 PF00005 ABC transporter E4O06_00545 PF00664 ABC transporter transmembrane region E4O06_00545 PF03412 Peptidase C39 family E4O06_00550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4O06_00575 PF17820 PDZ domain E4O06_00575 PF03572 Peptidase family S41 E4O06_00575 PF01471 Putative peptidoglycan binding domain E4O06_00585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O06_00595 PF01799 [2Fe-2S] binding domain E4O06_00595 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O06_00630 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_00635 PF00085 Thioredoxin E4O06_00645 PF00005 ABC transporter E4O06_00650 PF01032 FecCD transport family E4O06_00660 PF02514 CobN/Magnesium Chelatase E4O06_00665 PF17863 AAA lid domain E4O06_00665 PF01078 Magnesium chelatase, subunit ChlI E4O06_00665 PF13519 von Willebrand factor type A domain E4O06_00670 PF01078 Magnesium chelatase, subunit ChlI E4O06_00670 PF17863 AAA lid domain E4O06_00675 PF02384 N-6 DNA Methylase E4O06_00695 PF01420 Type I restriction modification DNA specificity domain E4O06_00700 PF02899 Phage integrase, N-terminal SAM-like domain E4O06_00700 PF00589 Phage integrase family E4O06_00715 PF01420 Type I restriction modification DNA specificity domain E4O06_00725 PF11867 Domain of unknown function (DUF3387) E4O06_00725 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4O06_00725 PF18766 SWI2/SNF2 ATPase E4O06_00730 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4O06_00735 PF03553 Na+/H+ antiporter family E4O06_00740 PF00005 ABC transporter E4O06_00745 PF01032 FecCD transport family E4O06_00765 PF00082 Subtilase family E4O06_00765 PF05922 Peptidase inhibitor I9 E4O06_00770 PF03144 Elongation factor Tu domain 2 E4O06_00770 PF03143 Elongation factor Tu C-terminal domain E4O06_00770 PF00009 Elongation factor Tu GTP binding domain E4O06_00775 PF00338 Ribosomal protein S10p/S20e E4O06_00780 PF00297 Ribosomal protein L3 E4O06_00785 PF00573 Ribosomal protein L4/L1 family E4O06_00790 PF00276 Ribosomal protein L23 E4O06_00795 PF00181 Ribosomal Proteins L2, RNA binding domain E4O06_00795 PF03947 Ribosomal Proteins L2, C-terminal domain E4O06_00800 PF00203 Ribosomal protein S19 E4O06_00805 PF00237 Ribosomal protein L22p/L17e E4O06_00810 PF00189 Ribosomal protein S3, C-terminal domain E4O06_00810 PF07650 KH domain E4O06_00815 PF00252 Ribosomal protein L16p/L10e E4O06_00820 PF00831 Ribosomal L29 protein E4O06_00825 PF00366 Ribosomal protein S17 E4O06_00830 PF00238 Ribosomal protein L14p/L23e E4O06_00835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4O06_00835 PF00467 KOW motif E4O06_00840 PF00673 ribosomal L5P family C-terminus E4O06_00840 PF00281 Ribosomal protein L5 E4O06_00845 PF00253 Ribosomal protein S14p/S29e E4O06_00850 PF00410 Ribosomal protein S8 E4O06_00855 PF00347 Ribosomal protein L6 E4O06_00860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4O06_00865 PF03719 Ribosomal protein S5, C-terminal domain E4O06_00865 PF00333 Ribosomal protein S5, N-terminal domain E4O06_00870 PF00327 Ribosomal protein L30p/L7e E4O06_00875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4O06_00880 PF00344 SecY translocase E4O06_00885 PF00444 Ribosomal protein L36 E4O06_00890 PF00416 Ribosomal protein S13/S18 E4O06_00895 PF00411 Ribosomal protein S11 E4O06_00900 PF01000 RNA polymerase Rpb3/RpoA insert domain E4O06_00900 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4O06_00900 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4O06_00905 PF01196 Ribosomal protein L17 E4O06_00925 PF00708 Acylphosphatase E4O06_00945 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O06_00965 PF13649 Methyltransferase domain E4O06_00970 PF02082 Transcriptional regulator E4O06_00975 PF13460 NAD(P)H-binding E4O06_00995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_00995 PF00672 HAMP domain E4O06_01015 PF03852 DNA mismatch endonuclease Vsr E4O06_01020 PF00145 C-5 cytosine-specific DNA methylase E4O06_01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_01030 PF00072 Response regulator receiver domain E4O06_01090 PF00005 ABC transporter E4O06_01105 PF01022 Bacterial regulatory protein, arsR family E4O06_01110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_01110 PF00672 HAMP domain E4O06_01110 PF02743 Cache domain E4O06_01120 PF11855 Protein of unknown function (DUF3375) E4O06_01140 PF00672 HAMP domain E4O06_01140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_01140 PF17202 Single cache domain 3 E4O06_01155 PF12833 Helix-turn-helix domain E4O06_01155 PF02311 AraC-like ligand binding domain E4O06_01160 PF00005 ABC transporter E4O06_01160 PF00664 ABC transporter transmembrane region E4O06_01160 PF03412 Peptidase C39 family E4O06_01165 PF00005 ABC transporter E4O06_01165 PF00664 ABC transporter transmembrane region E4O06_01175 PF05726 Pirin C-terminal cupin domain E4O06_01175 PF02678 Pirin E4O06_01195 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_01205 PF01613 Flavin reductase like domain E4O06_01210 PF01638 HxlR-like helix-turn-helix E4O06_01220 PF00664 ABC transporter transmembrane region E4O06_01220 PF00005 ABC transporter E4O06_01225 PF00664 ABC transporter transmembrane region E4O06_01225 PF00005 ABC transporter E4O06_01230 PF00005 ABC transporter E4O06_01245 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O06_01245 PF00440 Bacterial regulatory proteins, tetR family E4O06_01250 PF07977 FabA-like domain E4O06_01255 PF01225 Mur ligase family, catalytic domain E4O06_01255 PF02875 Mur ligase family, glutamate ligase domain E4O06_01255 PF08245 Mur ligase middle domain E4O06_01260 PF01430 Hsp33 protein E4O06_01265 PF02570 Precorrin-8X methylmutase E4O06_01275 PF00005 ABC transporter E4O06_01275 PF00664 ABC transporter transmembrane region E4O06_01280 PF00005 ABC transporter E4O06_01280 PF00664 ABC transporter transmembrane region E4O06_01290 PF00005 ABC transporter E4O06_01295 PF00950 ABC 3 transport family E4O06_01325 PF02568 Thiamine biosynthesis protein (ThiI) E4O06_01325 PF02926 THUMP domain E4O06_01330 PF00793 DAHP synthetase I family E4O06_01335 PF02229 Transcriptional Coactivator p15 (PC4) E4O06_01340 PF01066 CDP-alcohol phosphatidyltransferase E4O06_01345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O06_01345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O06_01360 PF02508 Rnf-Nqr subunit, membrane protein E4O06_01365 PF02508 Rnf-Nqr subunit, membrane protein E4O06_01370 PF04205 FMN-binding domain E4O06_01375 PF03116 NQR2, RnfD, RnfE family E4O06_01380 PF13237 4Fe-4S dicluster domain E4O06_01380 PF13375 RnfC Barrel sandwich hybrid domain E4O06_01380 PF10531 SLBB domain E4O06_01380 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O06_01390 PF13519 von Willebrand factor type A domain E4O06_01410 PF16314 Domain of unknown function (DUF4954) E4O06_01425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_01425 PF00672 HAMP domain E4O06_01425 PF02743 Cache domain E4O06_01440 PF00572 Ribosomal protein L13 E4O06_01445 PF00380 Ribosomal protein S9/S16 E4O06_01450 PF02631 RecX family E4O06_01455 PF00486 Transcriptional regulatory protein, C terminal E4O06_01455 PF00072 Response regulator receiver domain E4O06_01480 PF01479 S4 domain E4O06_01480 PF00849 RNA pseudouridylate synthase E4O06_01485 PF00579 tRNA synthetases class I (W and Y) E4O06_01495 PF01921 tRNA synthetases class I (K) E4O06_01500 PF00005 ABC transporter E4O06_01500 PF00664 ABC transporter transmembrane region E4O06_01505 PF00005 ABC transporter E4O06_01505 PF00664 ABC transporter transmembrane region E4O06_01525 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O06_01530 PF01134 Glucose inhibited division protein A E4O06_01530 PF13932 GidA associated domain E4O06_01555 PF01973 Protein of unknown function DUF115 E4O06_01565 PF00005 ABC transporter E4O06_01570 PF00005 ABC transporter E4O06_01570 PF00664 ABC transporter transmembrane region E4O06_01590 PF09820 Predicted AAA-ATPase E4O06_01590 PF08011 PD-(D/E)XK nuclease superfamily E4O06_01595 PF18073 Rubredoxin metal binding domain E4O06_01595 PF06745 KaiC E4O06_01605 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4O06_01610 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_01620 PF02527 rRNA small subunit methyltransferase G E4O06_01625 PF00171 Aldehyde dehydrogenase family E4O06_01645 PF00814 Glycoprotease family E4O06_01655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4O06_01655 PF00672 HAMP domain E4O06_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_01655 PF00512 His Kinase A (phospho-acceptor) domain E4O06_01655 PF00072 Response regulator receiver domain E4O06_01655 PF01627 Hpt domain E4O06_01660 PF00072 Response regulator receiver domain E4O06_01660 PF00486 Transcriptional regulatory protein, C terminal E4O06_01670 PF08241 Methyltransferase domain E4O06_01690 PF03167 Uracil DNA glycosylase superfamily E4O06_01695 PF00270 DEAD/DEAH box helicase E4O06_01695 PF00271 Helicase conserved C-terminal domain E4O06_01695 PF17764 3′ DNA-binding domain (3′BD) E4O06_01695 PF18074 Primosomal protein N C-terminal domain E4O06_01695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4O06_01715 PF09820 Predicted AAA-ATPase E4O06_01715 PF08011 PD-(D/E)XK nuclease superfamily E4O06_01720 PF03462 PCRF domain E4O06_01720 PF00472 RF-1 domain E4O06_01725 PF05175 Methyltransferase small domain E4O06_01725 PF17827 PrmC N-terminal domain E4O06_01725 PF02390 Putative methyltransferase E4O06_01735 PF08011 PD-(D/E)XK nuclease superfamily E4O06_01735 PF09820 Predicted AAA-ATPase E4O06_01750 PF13537 Glutamine amidotransferase domain E4O06_01750 PF00156 Phosphoribosyl transferase domain E4O06_01780 PF04552 Sigma-54, DNA binding domain E4O06_01780 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4O06_01780 PF04963 Sigma-54 factor, core binding domain E4O06_01785 PF00753 Metallo-beta-lactamase superfamily E4O06_01795 PF01370 NAD dependent epimerase/dehydratase family E4O06_01800 PF00468 Ribosomal protein L34 E4O06_01805 PF00825 Ribonuclease P E4O06_01810 PF01809 Putative membrane protein insertion efficiency factor E4O06_01815 PF02096 60Kd inner membrane protein E4O06_01815 PF14849 YidC periplasmic domain E4O06_01820 PF14804 Jag N-terminus E4O06_01820 PF01424 R3H domain E4O06_01830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4O06_01840 PF03186 CobD/Cbib protein E4O06_01845 PF00574 Clp protease E4O06_01850 PF02446 4-alpha-glucanotransferase E4O06_01860 PF07478 D-ala D-ala ligase C-terminus E4O06_01860 PF01820 D-ala D-ala ligase N-terminus E4O06_01870 PF02654 Cobalamin-5-phosphate synthase E4O06_01880 PF07730 Histidine kinase E4O06_01895 PF00005 ABC transporter E4O06_01910 PF05175 Methyltransferase small domain E4O06_01915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O06_01920 PF08534 Redoxin E4O06_01925 PF12801 4Fe-4S binding domain E4O06_01925 PF04205 FMN-binding domain E4O06_01935 PF00578 AhpC/TSA family E4O06_01945 PF03553 Na+/H+ antiporter family E4O06_01950 PF07969 Amidohydrolase family E4O06_01965 PF02733 Dak1 domain E4O06_01970 PF02733 Dak1 domain E4O06_01970 PF02734 DAK2 domain E4O06_01980 PF07969 Amidohydrolase family E4O06_01990 PF01032 FecCD transport family E4O06_02005 PF02599 Global regulator protein family E4O06_02010 PF02623 FliW protein E4O06_02015 PF07196 Flagellin hook IN motif E4O06_02015 PF00700 Bacterial flagellin C-terminal helical region E4O06_02015 PF00669 Bacterial flagellin N-terminal helical region E4O06_02020 PF07196 Flagellin hook IN motif E4O06_02020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O06_02040 PF02545 Maf-like protein E4O06_02045 PF00318 Ribosomal protein S2 E4O06_02050 PF00889 Elongation factor TS E4O06_02055 PF01765 Ribosome recycling factor E4O06_02060 PF01255 Putative undecaprenyl diphosphate synthase E4O06_02070 PF13288 DXP reductoisomerase C-terminal domain E4O06_02070 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4O06_02070 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4O06_02075 PF02163 Peptidase family M50 E4O06_02075 PF17820 PDZ domain E4O06_02085 PF13603 Leucyl-tRNA synthetase, Domain 2 E4O06_02085 PF08264 Anticodon-binding domain of tRNA E4O06_02085 PF09334 tRNA synthetases class I (M) E4O06_02085 PF00133 tRNA synthetases class I (I, L, M and V) E4O06_02090 PF02743 Cache domain E4O06_02090 PF00672 HAMP domain E4O06_02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_02100 PF17755 UvrA DNA-binding domain E4O06_02100 PF17760 UvrA interaction domain E4O06_02100 PF00005 ABC transporter E4O06_02110 PF17674 HHH domain E4O06_02110 PF00575 S1 RNA binding domain E4O06_02110 PF09371 Tex-like protein N-terminal domain E4O06_02110 PF16921 Tex protein YqgF-like domain E4O06_02115 PF01814 Hemerythrin HHE cation binding domain E4O06_02125 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O06_02125 PF13654 AAA domain E4O06_02130 PF13742 OB-fold nucleic acid binding domain E4O06_02130 PF02601 Exonuclease VII, large subunit E4O06_02140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4O06_02140 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E4O06_02150 PF16811 TRAP transporter T-component E4O06_02160 PF02310 B12 binding domain E4O06_02165 PF13941 MutL protein E4O06_02170 PF01783 Ribosomal L32p protein family E4O06_02175 PF00550 Phosphopantetheine attachment site E4O06_02180 PF14622 Ribonuclease-III-like E4O06_02180 PF00035 Double-stranded RNA binding motif E4O06_02185 PF00011 Hsp20/alpha crystallin family E4O06_02195 PF01743 Poly A polymerase head domain E4O06_02195 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O06_02195 PF13735 tRNA nucleotidyltransferase domain 2 putative E4O06_02200 PF01544 CorA-like Mg2+ transporter protein E4O06_02205 PF02719 Polysaccharide biosynthesis protein E4O06_02210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_02215 PF06574 FAD synthetase E4O06_02215 PF01687 Riboflavin kinase E4O06_02220 PF00312 Ribosomal protein S15 E4O06_02225 PF00013 KH domain E4O06_02225 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4O06_02225 PF01138 3' exoribonuclease family, domain 1 E4O06_02225 PF03725 3' exoribonuclease family, domain 2 E4O06_02225 PF00575 S1 RNA binding domain E4O06_02230 PF00692 dUTPase E4O06_02245 PF06368 Methylaspartate mutase E chain (MutE) E4O06_02250 PF07476 Methylaspartate ammonia-lyase C-terminus E4O06_02250 PF05034 Methylaspartate ammonia-lyase N-terminus E4O06_02255 PF01497 Periplasmic binding protein E4O06_02260 PF01032 FecCD transport family E4O06_02265 PF00005 ABC transporter E4O06_02270 PF07687 Peptidase dimerisation domain E4O06_02270 PF01546 Peptidase family M20/M25/M40 E4O06_02280 PF01297 Zinc-uptake complex component A periplasmic E4O06_02300 PF03129 Anticodon binding domain E4O06_02300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O06_02300 PF04073 Aminoacyl-tRNA editing domain E4O06_02310 PF10502 Signal peptidase, peptidase S26 E4O06_02320 PF13407 Periplasmic binding protein domain E4O06_02320 PF18610 Periplasmic binding protein domain E4O06_02325 PF00005 ABC transporter E4O06_02330 PF02653 Branched-chain amino acid transport system / permease component E4O06_02335 PF13847 Methyltransferase domain E4O06_02350 PF10509 Galactokinase galactose-binding signature E4O06_02350 PF00288 GHMP kinases N terminal domain E4O06_02350 PF08544 GHMP kinases C terminal E4O06_02360 PF01784 NIF3 (NGG1p interacting factor 3) E4O06_02375 PF13726 Na+-H+ antiporter family E4O06_02375 PF03553 Na+/H+ antiporter family E4O06_02380 PF03553 Na+/H+ antiporter family E4O06_02385 PF00892 EamA-like transporter family E4O06_02395 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O06_02400 PF01177 Asp/Glu/Hydantoin racemase E4O06_02405 PF10371 Domain of unknown function E4O06_02405 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O06_02405 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O06_02405 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O06_02405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O06_02410 PF00849 RNA pseudouridylate synthase E4O06_02410 PF01479 S4 domain E4O06_02415 PF00155 Aminotransferase class I and II E4O06_02425 PF14821 Threonine synthase N terminus E4O06_02425 PF00291 Pyridoxal-phosphate dependent enzyme E4O06_02430 PF02885 Glycosyl transferase family, helical bundle domain E4O06_02430 PF00591 Glycosyl transferase family, a/b domain E4O06_02430 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4O06_02435 PF01368 DHH family E4O06_02435 PF02272 DHHA1 domain E4O06_02435 PF17768 RecJ OB domain E4O06_02435 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4O06_02440 PF01476 LysM domain E4O06_02440 PF08525 Opacity-associated protein A N-terminal motif E4O06_02440 PF01551 Peptidase family M23 E4O06_02450 PF17762 HTH domain found in ParB protein E4O06_02450 PF02195 ParB-like nuclease domain E4O06_02455 PF00501 AMP-binding enzyme E4O06_02470 PF14353 CpXC protein E4O06_02480 PF01569 PAP2 superfamily E4O06_02485 PF01926 50S ribosome-binding GTPase E4O06_02485 PF12631 MnmE helical domain E4O06_02485 PF10396 GTP-binding protein TrmE N-terminus E4O06_02490 PF09820 Predicted AAA-ATPase E4O06_02490 PF08011 PD-(D/E)XK nuclease superfamily E4O06_02495 PF00654 Voltage gated chloride channel E4O06_02525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O06_02525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4O06_02525 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_02535 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O06_02545 PF04298 Putative neutral zinc metallopeptidase E4O06_02550 PF00672 HAMP domain E4O06_02550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_02550 PF02743 Cache domain E4O06_02555 PF01189 16S rRNA methyltransferase RsmB/F E4O06_02555 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4O06_02555 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4O06_02560 PF13302 Acetyltransferase (GNAT) domain E4O06_02565 PF09820 Predicted AAA-ATPase E4O06_02565 PF08011 PD-(D/E)XK nuclease superfamily E4O06_02575 PF00005 ABC transporter E4O06_02610 PF05198 Translation initiation factor IF-3, N-terminal domain E4O06_02610 PF00707 Translation initiation factor IF-3, C-terminal domain E4O06_02615 PF01632 Ribosomal protein L35 E4O06_02620 PF00453 Ribosomal protein L20 E4O06_02630 PF05164 Cell division protein ZapA E4O06_02635 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4O06_02645 PF01476 LysM domain E4O06_02645 PF01464 Transglycosylase SLT domain E4O06_02665 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_02670 PF03313 Serine dehydratase alpha chain E4O06_02675 PF00912 Transglycosylase E4O06_02675 PF00905 Penicillin binding protein transpeptidase domain E4O06_02675 PF06832 Penicillin-Binding Protein C-terminus Family E4O06_02680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O06_02680 PF00326 Prolyl oligopeptidase family E4O06_02705 PF05525 Branched-chain amino acid transport protein E4O06_02720 PF04055 Radical SAM superfamily E4O06_02720 PF00919 Uncharacterized protein family UPF0004 E4O06_02745 PF00232 Glycosyl hydrolase family 1 E4O06_02760 PF00005 ABC transporter E4O06_02760 PF12848 ABC transporter E4O06_02770 PF03572 Peptidase family S41 E4O06_02770 PF13180 PDZ domain E4O06_02770 PF01471 Putative peptidoglycan binding domain E4O06_02775 PF04452 RNA methyltransferase E4O06_02790 PF02517 CPBP intramembrane metalloprotease E4O06_02795 PF02517 CPBP intramembrane metalloprotease E4O06_02835 PF00664 ABC transporter transmembrane region E4O06_02835 PF00005 ABC transporter E4O06_02835 PF03412 Peptidase C39 family E4O06_02840 PF00675 Insulinase (Peptidase family M16) E4O06_02840 PF08367 Peptidase M16C associated E4O06_02840 PF05193 Peptidase M16 inactive domain E4O06_02845 PF02075 Crossover junction endodeoxyribonuclease RuvC E4O06_02850 PF01330 RuvA N terminal domain E4O06_02880 PF13726 Na+-H+ antiporter family E4O06_02880 PF03553 Na+/H+ antiporter family E4O06_02900 PF00005 ABC transporter E4O06_02935 PF00005 ABC transporter E4O06_02940 PF01891 Cobalt uptake substrate-specific transmembrane region E4O06_02965 PF01609 Transposase DDE domain E4O06_02965 PF05598 Transposase domain (DUF772) E4O06_02980 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4O06_02985 PF00004 ATPase family associated with various cellular activities (AAA) E4O06_02985 PF10431 C-terminal, D2-small domain, of ClpB protein E4O06_02985 PF02861 Clp amino terminal domain, pathogenicity island component E4O06_02985 PF07724 AAA domain (Cdc48 subfamily) E4O06_02985 PF17871 AAA lid domain E4O06_02990 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4O06_03000 PF02677 Epoxyqueuosine reductase QueH E4O06_03005 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4O06_03025 PF00664 ABC transporter transmembrane region E4O06_03025 PF00005 ABC transporter E4O06_03030 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O06_03035 PF03687 Uncharacterised protein family (UPF0164) E4O06_03045 PF00672 HAMP domain E4O06_03045 PF07228 Stage II sporulation protein E (SpoIIE) E4O06_03050 PF00005 ABC transporter E4O06_03050 PF13732 Domain of unknown function (DUF4162) E4O06_03070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4O06_03090 PF00271 Helicase conserved C-terminal domain E4O06_03090 PF00270 DEAD/DEAH box helicase E4O06_03100 PF01979 Amidohydrolase family E4O06_03145 PF07075 Protein of unknown function (DUF1343) E4O06_03150 PF00144 Beta-lactamase E4O06_03160 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O06_03165 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O06_03170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4O06_03170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4O06_03175 PF02881 SRP54-type protein, helical bundle domain E4O06_03175 PF00448 SRP54-type protein, GTPase domain E4O06_03175 PF02978 Signal peptide binding domain E4O06_03180 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4O06_03185 PF01176 Translation initiation factor 1A / IF-1 E4O06_03190 PF00226 DnaJ domain E4O06_03190 PF00684 DnaJ central domain E4O06_03190 PF01556 DnaJ C terminal domain E4O06_03195 PF00696 Amino acid kinase family E4O06_03200 PF00588 SpoU rRNA Methylase family E4O06_03215 PF00575 S1 RNA binding domain E4O06_03220 PF00072 Response regulator receiver domain E4O06_03220 PF00158 Sigma-54 interaction domain E4O06_03220 PF02954 Bacterial regulatory protein, Fis family E4O06_03240 PF00563 EAL domain E4O06_03240 PF00990 Diguanylate cyclase, GGDEF domain E4O06_03240 PF03707 Bacterial signalling protein N terminal repeat E4O06_03245 PF04055 Radical SAM superfamily E4O06_03270 PF01042 Endoribonuclease L-PSP E4O06_03275 PF01119 DNA mismatch repair protein, C-terminal domain E4O06_03275 PF08676 MutL C terminal dimerisation domain E4O06_03280 PF02609 Exonuclease VII small subunit E4O06_03285 PF00005 ABC transporter E4O06_03290 PF00005 ABC transporter E4O06_03300 PF04023 FeoA domain E4O06_03305 PF07670 Nucleoside recognition E4O06_03305 PF04023 FeoA domain E4O06_03305 PF17910 FeoB cytosolic helical domain E4O06_03305 PF02421 Ferrous iron transport protein B E4O06_03305 PF07664 Ferrous iron transport protein B C terminus E4O06_03350 PF00266 Aminotransferase class-V E4O06_03380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O06_03395 PF03462 PCRF domain E4O06_03395 PF00472 RF-1 domain E4O06_03410 PF00448 SRP54-type protein, GTPase domain E4O06_03410 PF02881 SRP54-type protein, helical bundle domain E4O06_03420 PF02687 FtsX-like permease family E4O06_03420 PF12704 MacB-like periplasmic core domain E4O06_03425 PF00005 ABC transporter E4O06_03435 PF02151 UvrB/uvrC motif E4O06_03440 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4O06_03445 PF00004 ATPase family associated with various cellular activities (AAA) E4O06_03445 PF07724 AAA domain (Cdc48 subfamily) E4O06_03445 PF17871 AAA lid domain E4O06_03445 PF02861 Clp amino terminal domain, pathogenicity island component E4O06_03445 PF10431 C-terminal, D2-small domain, of ClpB protein E4O06_03450 PF00483 Nucleotidyl transferase E4O06_03455 PF13439 Glycosyltransferase Family 4 E4O06_03455 PF00534 Glycosyl transferases group 1 E4O06_03465 PF03330 Lytic transglycolase E4O06_03475 PF01026 TatD related DNase E4O06_03480 PF00691 OmpA family E4O06_03515 PF05785 Rho-activating domain of cytotoxic necrotizing factor E4O06_03515 PF18807 Tripartite Tc toxins repeat E4O06_03570 PF01609 Transposase DDE domain E4O06_03570 PF05598 Transposase domain (DUF772) E4O06_03595 PF01546 Peptidase family M20/M25/M40 E4O06_03595 PF07687 Peptidase dimerisation domain E4O06_03605 PF03606 C4-dicarboxylate anaerobic carrier E4O06_03630 PF00440 Bacterial regulatory proteins, tetR family E4O06_03640 PF01432 Peptidase family M3 E4O06_03640 PF08439 Oligopeptidase F E4O06_03645 PF00929 Exonuclease E4O06_03650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O06_03650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O06_03650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O06_03650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O06_03655 PF01078 Magnesium chelatase, subunit ChlI E4O06_03655 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4O06_03660 PF00206 Lyase E4O06_03660 PF10415 Fumarase C C-terminus E4O06_03665 PF13488 Glycine zipper E4O06_03665 PF00691 OmpA family E4O06_03670 PF05872 Bacterial protein of unknown function (DUF853) E4O06_03680 PF03717 Penicillin-binding Protein dimerisation domain E4O06_03680 PF00905 Penicillin binding protein transpeptidase domain E4O06_03690 PF02517 CPBP intramembrane metalloprotease E4O06_03710 PF09186 Domain of unknown function (DUF1949) E4O06_03710 PF01205 Uncharacterized protein family UPF0029 E4O06_03735 PF03477 ATP cone domain E4O06_03745 PF01145 SPFH domain / Band 7 family E4O06_03750 PF01145 SPFH domain / Band 7 family E4O06_03760 PF03062 MBOAT, membrane-bound O-acyltransferase family E4O06_03770 PF08544 GHMP kinases C terminal E4O06_03770 PF00288 GHMP kinases N terminal domain E4O06_03775 PF04026 SpoVG E4O06_03785 PF14693 Ribosomal protein TL5, C-terminal domain E4O06_03785 PF01386 Ribosomal L25p family E4O06_03790 PF01171 PP-loop family E4O06_03800 PF17820 PDZ domain E4O06_03800 PF13180 PDZ domain E4O06_03815 PF08275 DNA primase catalytic core, N-terminal domain E4O06_03815 PF01807 CHC2 zinc finger E4O06_03820 PF04545 Sigma-70, region 4 E4O06_03820 PF04539 Sigma-70 region 3 E4O06_03820 PF03979 Sigma-70 factor, region 1.1 E4O06_03820 PF00140 Sigma-70 factor, region 1.2 E4O06_03820 PF04542 Sigma-70 region 2 E4O06_03855 PF03717 Penicillin-binding Protein dimerisation domain E4O06_03855 PF00905 Penicillin binding protein transpeptidase domain E4O06_03860 PF01098 Cell cycle protein E4O06_03885 PF01263 Aldose 1-epimerase E4O06_03895 PF00860 Permease family E4O06_03900 PF13495 Phage integrase, N-terminal SAM-like domain E4O06_03900 PF00589 Phage integrase family E4O06_03920 PF01177 Asp/Glu/Hydantoin racemase E4O06_03975 PF04471 Restriction endonuclease E4O06_03975 PF14338 Mrr N-terminal domain E4O06_04015 PF01850 PIN domain E4O06_04065 PF01609 Transposase DDE domain E4O06_04065 PF05598 Transposase domain (DUF772) E4O06_04115 PF01554 MatE E4O06_04175 PF00145 C-5 cytosine-specific DNA methylase E4O06_04185 PF01555 DNA methylase E4O06_04205 PF01609 Transposase DDE domain E4O06_04205 PF05598 Transposase domain (DUF772) E4O06_04330 PF01555 DNA methylase E4O06_04340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4O06_04345 PF01850 PIN domain E4O06_04410 PF05598 Transposase domain (DUF772) E4O06_04410 PF01609 Transposase DDE domain E4O06_04430 PF01609 Transposase DDE domain E4O06_04430 PF05598 Transposase domain (DUF772) E4O06_04445 PF01209 ubiE/COQ5 methyltransferase family E4O06_04460 PF00300 Histidine phosphatase superfamily (branch 1) E4O06_04470 PF05598 Transposase domain (DUF772) E4O06_04470 PF01609 Transposase DDE domain E4O06_04480 PF01966 HD domain E4O06_04510 PF06397 Desulfoferrodoxin, N-terminal domain E4O06_04510 PF01880 Desulfoferrodoxin E4O06_04515 PF16363 GDP-mannose 4,6 dehydratase E4O06_04525 PF04294 VanW like protein E4O06_04530 PF00829 Ribosomal prokaryotic L21 protein E4O06_04540 PF01016 Ribosomal L27 protein E4O06_04545 PF01018 GTP1/OBG E4O06_04545 PF01926 50S ribosome-binding GTPase E4O06_04550 PF01467 Cytidylyltransferase-like E4O06_04565 PF02417 Chromate transporter E4O06_04570 PF02417 Chromate transporter E4O06_04590 PF00501 AMP-binding enzyme E4O06_04600 PF17092 Penicillin-binding protein OB-like domain E4O06_04600 PF00912 Transglycosylase E4O06_04600 PF00905 Penicillin binding protein transpeptidase domain E4O06_04610 PF01551 Peptidase family M23 E4O06_04610 PF04225 Opacity-associated protein A LysM-like domain E4O06_04620 PF00037 4Fe-4S binding domain E4O06_04630 PF03372 Endonuclease/Exonuclease/phosphatase family E4O06_04635 PF00557 Metallopeptidase family M24 E4O06_04640 PF00226 DnaJ domain E4O06_04640 PF01556 DnaJ C terminal domain E4O06_04640 PF00684 DnaJ central domain E4O06_04660 PF01593 Flavin containing amine oxidoreductase E4O06_04665 PF00175 Oxidoreductase NAD-binding domain E4O06_04665 PF00042 Globin E4O06_04665 PF00970 Oxidoreductase FAD-binding domain E4O06_04680 PF12626 Polymerase A arginine-rich C-terminus E4O06_04680 PF01743 Poly A polymerase head domain E4O06_04680 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O06_04690 PF17191 RecG wedge domain E4O06_04690 PF00270 DEAD/DEAH box helicase E4O06_04690 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O06_04695 PF00958 GMP synthase C terminal domain E4O06_04695 PF00117 Glutamine amidotransferase class-I E4O06_04695 PF01171 PP-loop family E4O06_04705 PF00162 Phosphoglycerate kinase E4O06_04710 PF01520 N-acetylmuramoyl-L-alanine amidase E4O06_04720 PF04620 Flagellar filament outer layer protein Flaa E4O06_04730 PF01649 Ribosomal protein S20 E4O06_04740 PF00795 Carbon-nitrogen hydrolase E4O06_04750 PF00994 Probable molybdopterin binding domain E4O06_04750 PF02464 Competence-damaged protein E4O06_04750 PF18146 Damage-inducible protein CinA KH domain E4O06_04800 PF00300 Histidine phosphatase superfamily (branch 1) E4O06_04805 PF07171 MlrC C-terminus E4O06_04805 PF07364 Metallopeptidase family M81 E4O06_04820 PF00005 ABC transporter E4O06_04835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O06_04840 PF00563 EAL domain E4O06_04840 PF01590 GAF domain E4O06_04840 PF00990 Diguanylate cyclase, GGDEF domain E4O06_04840 PF00360 Phytochrome region E4O06_04845 PF00156 Phosphoribosyl transferase domain E4O06_04850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O06_04850 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O06_04850 PF16886 ATPsynthase alpha/beta subunit N-term extension E4O06_04855 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O06_04855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O06_04860 PF01813 ATP synthase subunit D E4O06_04875 PF01250 Ribosomal protein S6 E4O06_04880 PF00436 Single-strand binding protein family E4O06_04885 PF01084 Ribosomal protein S18 E4O06_04890 PF01281 Ribosomal protein L9, N-terminal domain E4O06_04890 PF03948 Ribosomal protein L9, C-terminal domain E4O06_04900 PF06689 ClpX C4-type zinc finger E4O06_04900 PF10431 C-terminal, D2-small domain, of ClpB protein E4O06_04900 PF07724 AAA domain (Cdc48 subfamily) E4O06_04905 PF00574 Clp protease E4O06_04910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O06_04910 PF05697 Bacterial trigger factor protein (TF) E4O06_04910 PF05698 Bacterial trigger factor protein (TF) C-terminus E4O06_04930 PF00155 Aminotransferase class I and II E4O06_04940 PF01008 Initiation factor 2 subunit family E4O06_04960 PF03796 DnaB-like helicase C terminal domain E4O06_04960 PF00772 DnaB-like helicase N terminal domain E4O06_04970 PF01411 tRNA synthetases class II (A) E4O06_04970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O06_04975 PF13145 PPIC-type PPIASE domain E4O06_04980 PF01029 NusB family E4O06_04995 PF04408 Helicase associated domain (HA2) E4O06_04995 PF00270 DEAD/DEAH box helicase E4O06_04995 PF00271 Helicase conserved C-terminal domain E4O06_04995 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4O06_05000 PF02632 BioY family E4O06_05005 PF00005 ABC transporter E4O06_05025 PF01327 Polypeptide deformylase E4O06_05030 PF02911 Formyl transferase, C-terminal domain E4O06_05030 PF00551 Formyl transferase E4O06_05035 PF03793 PASTA domain E4O06_05045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4O06_05050 PF08501 Shikimate dehydrogenase substrate binding domain E4O06_05050 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4O06_05050 PF01488 Shikimate / quinate 5-dehydrogenase E4O06_05060 PF01121 Dephospho-CoA kinase E4O06_05065 PF01612 3'-5' exonuclease E4O06_05065 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4O06_05065 PF01367 5'-3' exonuclease, C-terminal SAM fold E4O06_05065 PF00476 DNA polymerase family A E4O06_05085 PF06857 Malonate decarboxylase delta subunit (MdcD) E4O06_05090 PF03328 HpcH/HpaI aldolase/citrate lyase family E4O06_05095 PF04223 Citrate lyase, alpha subunit (CitF) E4O06_05105 PF01418 Helix-turn-helix domain, rpiR family E4O06_05105 PF01380 SIS domain E4O06_05110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O06_05110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O06_05115 PF02447 GntP family permease E4O06_05120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O06_05120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O06_05125 PF01116 Fructose-bisphosphate aldolase class-II E4O06_05135 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_05135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O06_05140 PF01571 Aminomethyltransferase folate-binding domain E4O06_05140 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4O06_05145 PF01597 Glycine cleavage H-protein E4O06_05150 PF02347 Glycine cleavage system P-protein E4O06_05155 PF02347 Glycine cleavage system P-protein E4O06_05165 PF01022 Bacterial regulatory protein, arsR family E4O06_05170 PF00881 Nitroreductase family E4O06_05195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O06_05195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O06_05200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O06_05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_05205 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O06_05205 PF02256 Iron hydrogenase small subunit E4O06_05205 PF00037 4Fe-4S binding domain E4O06_05205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4O06_05255 PF00293 NUDIX domain E4O06_05260 PF00881 Nitroreductase family E4O06_05270 PF00293 NUDIX domain E4O06_05305 PF01888 CbiD E4O06_05310 PF12848 ABC transporter E4O06_05310 PF00005 ABC transporter E4O06_05315 PF01513 ATP-NAD kinase E4O06_05325 PF01584 CheW-like domain E4O06_05330 PF00579 tRNA synthetases class I (W and Y) E4O06_05335 PF02938 GAD domain E4O06_05335 PF00152 tRNA synthetases class II (D, K and N) E4O06_05335 PF01336 OB-fold nucleic acid binding domain E4O06_05355 PF08323 Starch synthase catalytic domain E4O06_05355 PF00534 Glycosyl transferases group 1 E4O06_05390 PF04055 Radical SAM superfamily E4O06_05390 PF01938 TRAM domain E4O06_05390 PF00919 Uncharacterized protein family UPF0004 E4O06_05395 PF04055 Radical SAM superfamily E4O06_05400 PF10437 Bacterial lipoate protein ligase C-terminus E4O06_05400 PF03099 Biotin/lipoate A/B protein ligase family E4O06_05405 PF00005 ABC transporter E4O06_05405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_05410 PF00005 ABC transporter E4O06_05410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_05415 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_05415 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O06_05420 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_05425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O06_05430 PF00365 Phosphofructokinase E4O06_05435 PF13662 Toprim domain E4O06_05435 PF02132 RecR protein E4O06_05440 PF02575 YbaB/EbfC DNA-binding family E4O06_05445 PF01351 Ribonuclease HII E4O06_05465 PF02618 YceG-like family E4O06_05480 PF03692 Putative zinc- or iron-chelating domain E4O06_05500 PF00533 BRCA1 C Terminus (BRCT) domain E4O06_05500 PF01653 NAD-dependent DNA ligase adenylation domain E4O06_05500 PF03120 NAD-dependent DNA ligase OB-fold domain E4O06_05505 PF00348 Polyprenyl synthetase E4O06_05515 PF13277 YmdB-like protein E4O06_05540 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E4O06_05540 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4O06_05545 PF08218 Citrate lyase ligase C-terminal domain E4O06_05550 PF05683 Fumarase C-terminus E4O06_05550 PF05681 Fumarate hydratase (Fumerase) E4O06_05555 PF05681 Fumarate hydratase (Fumerase) E4O06_05575 PF00005 ABC transporter E4O06_05580 PF02687 FtsX-like permease family E4O06_05580 PF12704 MacB-like periplasmic core domain E4O06_05595 PF10634 Fe2+ transport protein E4O06_05600 PF03239 Iron permease FTR1 family E4O06_05605 PF00005 ABC transporter E4O06_05615 PF03315 Serine dehydratase beta chain E4O06_05615 PF01842 ACT domain E4O06_05620 PF03313 Serine dehydratase alpha chain E4O06_05630 PF01197 Ribosomal protein L31 E4O06_05635 PF07498 Rho termination factor, N-terminal domain E4O06_05635 PF07497 Rho termination factor, RNA-binding domain E4O06_05635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O06_05650 PF00391 PEP-utilising enzyme, mobile domain E4O06_05650 PF02896 PEP-utilising enzyme, TIM barrel domain E4O06_05650 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4O06_05660 PF10397 Adenylosuccinate lyase C-terminus E4O06_05660 PF00206 Lyase E4O06_05665 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O06_05665 PF00072 Response regulator receiver domain E4O06_05675 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_05715 PF13525 Outer membrane lipoprotein E4O06_05725 PF02463 RecF/RecN/SMC N terminal domain E4O06_05725 PF06470 SMC proteins Flexible Hinge Domain E4O06_05735 PF00072 Response regulator receiver domain E4O06_05745 PF01584 CheW-like domain E4O06_05750 PF01627 Hpt domain E4O06_05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_05750 PF07194 P2 response regulator binding domain E4O06_05750 PF01584 CheW-like domain E4O06_05750 PF02895 Signal transducing histidine kinase, homodimeric domain E4O06_05765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4O06_05765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4O06_05770 PF01709 Transcriptional regulator E4O06_05780 PF01321 Creatinase/Prolidase N-terminal domain E4O06_05780 PF00557 Metallopeptidase family M24 E4O06_05805 PF00700 Bacterial flagellin C-terminal helical region E4O06_05805 PF00669 Bacterial flagellin N-terminal helical region E4O06_05810 PF00669 Bacterial flagellin N-terminal helical region E4O06_05810 PF00700 Bacterial flagellin C-terminal helical region E4O06_05820 PF07195 Flagellar hook-associated protein 2 C-terminus E4O06_05820 PF02465 Flagellar hook-associated protein 2 N-terminus E4O06_05835 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4O06_05845 PF00672 HAMP domain E4O06_05845 PF01966 HD domain E4O06_05850 PF06969 HemN C-terminal domain E4O06_05850 PF04055 Radical SAM superfamily E4O06_05855 PF10502 Signal peptidase, peptidase S26 E4O06_05860 PF01668 SmpB protein E4O06_05870 PF01300 Telomere recombination E4O06_05890 PF01973 Protein of unknown function DUF115 E4O06_05905 PF00005 ABC transporter E4O06_05935 PF00072 Response regulator receiver domain E4O06_05935 PF07494 Two component regulator propeller E4O06_05935 PF12833 Helix-turn-helix domain E4O06_05935 PF00512 His Kinase A (phospho-acceptor) domain E4O06_05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_05935 PF07495 Y_Y_Y domain E4O06_05940 PF00072 Response regulator receiver domain E4O06_05940 PF00486 Transcriptional regulatory protein, C terminal E4O06_05950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4O06_05960 PF00488 MutS domain V E4O06_05960 PF01713 Smr domain E4O06_05965 PF16745 RsgA N-terminal domain E4O06_05965 PF03193 RsgA GTPase E4O06_05970 PF01177 Asp/Glu/Hydantoin racemase E4O06_05990 PF10996 Beta-Casp domain E4O06_05990 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4O06_05990 PF00753 Metallo-beta-lactamase superfamily E4O06_05995 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O06_05995 PF00588 SpoU rRNA Methylase family E4O06_06000 PF13393 Histidyl-tRNA synthetase E4O06_06005 PF16363 GDP-mannose 4,6 dehydratase E4O06_06010 PF00483 Nucleotidyl transferase E4O06_06015 PF01370 NAD dependent epimerase/dehydratase family E4O06_06020 PF13439 Glycosyltransferase Family 4 E4O06_06020 PF00534 Glycosyl transferases group 1 E4O06_06030 PF14849 YidC periplasmic domain E4O06_06030 PF02096 60Kd inner membrane protein E4O06_06035 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E4O06_06045 PF14849 YidC periplasmic domain E4O06_06045 PF02096 60Kd inner membrane protein E4O06_06055 PF00535 Glycosyl transferase family 2 E4O06_06060 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E4O06_06065 PF01501 Glycosyl transferase family 8 E4O06_06065 PF00535 Glycosyl transferase family 2 E4O06_06080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O06_06100 PF00535 Glycosyl transferase family 2 E4O06_06105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4O06_06105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4O06_06105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4O06_06115 PF00535 Glycosyl transferase family 2 E4O06_06125 PF03102 NeuB family E4O06_06125 PF08666 SAF domain E4O06_06145 PF01370 NAD dependent epimerase/dehydratase family E4O06_06145 PF02911 Formyl transferase, C-terminal domain E4O06_06145 PF00551 Formyl transferase E4O06_06155 PF00551 Formyl transferase E4O06_06155 PF02911 Formyl transferase, C-terminal domain E4O06_06195 PF09940 Domain of unknown function (DUF2172) E4O06_06195 PF16254 Domain of unknown function (DUF4910) E4O06_06195 PF16221 winged helix-turn-helix E4O06_06205 PF00202 Aminotransferase class-III E4O06_06210 PF02348 Cytidylyltransferase E4O06_06220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O06_06225 PF02719 Polysaccharide biosynthesis protein E4O06_06255 PF13173 AAA domain E4O06_06255 PF13635 Domain of unknown function (DUF4143) E4O06_06260 PF00266 Aminotransferase class-V E4O06_06265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O06_06265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4O06_06285 PF00999 Sodium/hydrogen exchanger family E4O06_06310 PF01966 HD domain E4O06_06325 PF08239 Bacterial SH3 domain E4O06_06330 PF12848 ABC transporter E4O06_06330 PF00005 ABC transporter E4O06_06330 PF16326 ABC transporter C-terminal domain E4O06_06345 PF02540 NAD synthase E4O06_06350 PF01790 Prolipoprotein diacylglyceryl transferase E4O06_06360 PF10609 NUBPL iron-transfer P-loop NTPase E4O06_06390 PF13375 RnfC Barrel sandwich hybrid domain E4O06_06390 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O06_06390 PF13237 4Fe-4S dicluster domain E4O06_06390 PF10531 SLBB domain E4O06_06405 PF00849 RNA pseudouridylate synthase E4O06_06405 PF01479 S4 domain E4O06_06410 PF00403 Heavy-metal-associated domain E4O06_06415 PF01022 Bacterial regulatory protein, arsR family E4O06_06420 PF01991 ATP synthase (E/31 kDa) subunit E4O06_06440 PF04060 Putative Fe-S cluster E4O06_06445 PF07650 KH domain E4O06_06445 PF01926 50S ribosome-binding GTPase E4O06_06450 PF01808 AICARFT/IMPCHase bienzyme E4O06_06450 PF02142 MGS-like domain E4O06_06455 PF00551 Formyl transferase E4O06_06460 PF01043 SecA preprotein cross-linking domain E4O06_06460 PF02810 SEC-C motif E4O06_06460 PF07517 SecA DEAD-like domain E4O06_06460 PF07516 SecA Wing and Scaffold domain E4O06_06465 PF00392 Bacterial regulatory proteins, gntR family E4O06_06470 PF00005 ABC transporter E4O06_06485 PF01648 4'-phosphopantetheinyl transferase superfamily E4O06_06495 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4O06_06500 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4O06_06500 PF02779 Transketolase, pyrimidine binding domain E4O06_06500 PF02780 Transketolase, C-terminal domain E4O06_06505 PF02629 CoA binding domain E4O06_06505 PF06971 Putative DNA-binding protein N-terminus E4O06_06510 PF10672 S-adenosylmethionine-dependent methyltransferase E4O06_06515 PF17864 RuvB AAA lid domain E4O06_06515 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O06_06515 PF05491 RuvB C-terminal winged helix domain E4O06_06520 PF00465 Iron-containing alcohol dehydrogenase E4O06_06525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O06_06525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O06_06540 PF13186 Iron-sulfur cluster-binding domain E4O06_06555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O06_06575 PF03484 tRNA synthetase B5 domain E4O06_06575 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4O06_06590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4O06_06610 PF00163 Ribosomal protein S4/S9 N-terminal domain E4O06_06610 PF01479 S4 domain E4O06_06640 PF02653 Branched-chain amino acid transport system / permease component E4O06_06645 PF02653 Branched-chain amino acid transport system / permease component E4O06_06650 PF00005 ABC transporter E4O06_06655 PF02608 ABC transporter substrate-binding protein PnrA-like E4O06_06660 PF00753 Metallo-beta-lactamase superfamily E4O06_06660 PF12706 Beta-lactamase superfamily domain E4O06_06680 PF08264 Anticodon-binding domain of tRNA E4O06_06680 PF10458 Valyl tRNA synthetase tRNA binding arm E4O06_06680 PF00133 tRNA synthetases class I (I, L, M and V) E4O06_06685 PF06421 GTP-binding protein LepA C-terminus E4O06_06685 PF03144 Elongation factor Tu domain 2 E4O06_06685 PF00679 Elongation factor G C-terminus E4O06_06685 PF14492 Elongation Factor G, domain II E4O06_06685 PF00009 Elongation factor Tu GTP binding domain E4O06_06690 PF01467 Cytidylyltransferase-like E4O06_06700 PF00773 RNB domain E4O06_06705 PF01256 Carbohydrate kinase E4O06_06705 PF03853 YjeF-related protein N-terminus E4O06_06710 PF17757 UvrB interaction domain E4O06_06710 PF12344 Ultra-violet resistance protein B E4O06_06710 PF02151 UvrB/uvrC motif E4O06_06710 PF04851 Type III restriction enzyme, res subunit E4O06_06710 PF00271 Helicase conserved C-terminal domain E4O06_06715 PF00005 ABC transporter E4O06_06750 PF00664 ABC transporter transmembrane region E4O06_06750 PF00005 ABC transporter E4O06_06755 PF08021 Siderophore-interacting FAD-binding domain E4O06_06755 PF04954 Siderophore-interacting protein E4O06_06755 PF00005 ABC transporter E4O06_06755 PF00664 ABC transporter transmembrane region E4O06_06760 PF02311 AraC-like ligand binding domain E4O06_06760 PF12833 Helix-turn-helix domain E4O06_06770 PF00005 ABC transporter E4O06_06785 PF00005 ABC transporter E4O06_06790 PF00664 ABC transporter transmembrane region E4O06_06790 PF03412 Peptidase C39 family E4O06_06790 PF00005 ABC transporter E4O06_06800 PF04055 Radical SAM superfamily E4O06_06800 PF13186 Iron-sulfur cluster-binding domain E4O06_06855 PF13280 WYL domain E4O06_06855 PF08279 HTH domain E4O06_06860 PF00009 Elongation factor Tu GTP binding domain E4O06_06860 PF09105 Elongation factor SelB, winged helix E4O06_06860 PF09106 Elongation factor SelB, winged helix E4O06_06860 PF09107 Elongation factor SelB, winged helix E4O06_06860 PF03144 Elongation factor Tu domain 2 E4O06_06865 PF02690 Na+/Pi-cotransporter E4O06_06870 PF00999 Sodium/hydrogen exchanger family E4O06_06875 PF13180 PDZ domain E4O06_06875 PF17820 PDZ domain E4O06_06885 PF01728 FtsJ-like methyltransferase E4O06_06890 PF02954 Bacterial regulatory protein, Fis family E4O06_06890 PF00072 Response regulator receiver domain E4O06_06890 PF00158 Sigma-54 interaction domain E4O06_06895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_06895 PF00512 His Kinase A (phospho-acceptor) domain E4O06_06895 PF00989 PAS fold E4O06_06900 PF09115 DNA polymerase III, delta subunit, C terminal E4O06_06905 PF02674 Colicin V production protein E4O06_06920 PF04101 Glycosyltransferase family 28 C-terminal domain E4O06_06920 PF03033 Glycosyltransferase family 28 N-terminal domain E4O06_06925 PF00455 DeoR C terminal sensor domain E4O06_06925 PF08220 DeoR-like helix-turn-helix domain E4O06_06930 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E4O06_06940 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E4O06_06945 PF07005 Sugar-binding N-terminal domain E4O06_06945 PF17042 Nucleotide-binding C-terminal domain E4O06_06950 PF03812 2-keto-3-deoxygluconate permease E4O06_06970 PF13307 Helicase C-terminal domain E4O06_06970 PF06733 DEAD_2 E4O06_06975 PF02779 Transketolase, pyrimidine binding domain E4O06_06975 PF00456 Transketolase, thiamine diphosphate binding domain E4O06_06990 PF02463 RecF/RecN/SMC N terminal domain E4O06_07010 PF05257 CHAP domain E4O06_07010 PF01476 LysM domain E4O06_07020 PF07475 HPr Serine kinase C-terminal domain E4O06_07020 PF02603 HPr Serine kinase N terminus E4O06_07025 PF00381 PTS HPr component phosphorylation site E4O06_07030 PF01523 Putative modulator of DNA gyrase E4O06_07055 PF00005 ABC transporter E4O06_07090 PF02559 CarD-like/TRCF domain E4O06_07090 PF00270 DEAD/DEAH box helicase E4O06_07090 PF00271 Helicase conserved C-terminal domain E4O06_07090 PF03461 TRCF domain E4O06_07090 PF17757 UvrB interaction domain E4O06_07140 PF04773 FecR protein E4O06_07145 PF00672 HAMP domain E4O06_07145 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O06_07180 PF02769 AIR synthase related protein, C-terminal domain E4O06_07180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4O06_07180 PF00586 AIR synthase related protein, N-terminal domain E4O06_07185 PF04260 Protein of unknown function (DUF436) E4O06_07190 PF08011 PD-(D/E)XK nuclease superfamily E4O06_07190 PF09820 Predicted AAA-ATPase E4O06_07195 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O06_07195 PF02256 Iron hydrogenase small subunit E4O06_07195 PF12838 4Fe-4S dicluster domain E4O06_07200 PF01609 Transposase DDE domain E4O06_07200 PF05598 Transposase domain (DUF772) E4O06_07205 PF04556 DpnII restriction endonuclease E4O06_07210 PF01555 DNA methylase E4O06_07225 PF02843 Phosphoribosylglycinamide synthetase, C domain E4O06_07225 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4O06_07225 PF02844 Phosphoribosylglycinamide synthetase, N domain E4O06_07230 PF02769 AIR synthase related protein, C-terminal domain E4O06_07230 PF00586 AIR synthase related protein, N-terminal domain E4O06_07235 PF02743 Cache domain E4O06_07235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_07235 PF00672 HAMP domain E4O06_07240 PF04551 GcpE protein E4O06_07255 PF02028 BCCT, betaine/carnitine/choline family transporter E4O06_07260 PF12804 MobA-like NTP transferase domain E4O06_07265 PF01235 Sodium:alanine symporter family E4O06_07290 PF01713 Smr domain E4O06_07310 PF00092 von Willebrand factor type A domain E4O06_07320 PF01882 Protein of unknown function DUF58 E4O06_07340 PF00571 CBS domain E4O06_07340 PF03471 Transporter associated domain E4O06_07345 PF02130 Uncharacterized protein family UPF0054 E4O06_07350 PF07697 7TM-HD extracellular E4O06_07350 PF07698 7TM receptor with intracellular HD hydrolase E4O06_07350 PF01966 HD domain E4O06_07355 PF02562 PhoH-like protein E4O06_07370 PF00121 Triosephosphate isomerase E4O06_07390 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4O06_07390 PF00753 Metallo-beta-lactamase superfamily E4O06_07405 PF10282 Lactonase, 7-bladed beta-propeller E4O06_07410 PF01297 Zinc-uptake complex component A periplasmic E4O06_07415 PF00005 ABC transporter E4O06_07420 PF00950 ABC 3 transport family E4O06_07425 PF00950 ABC 3 transport family E4O06_07435 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O06_07450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O06_07450 PF18269 T3SS EscN ATPase C-terminal domain E4O06_07450 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O06_07455 PF02108 Flagellar assembly protein FliH E4O06_07460 PF14841 FliG middle domain E4O06_07460 PF14842 FliG N-terminal domain E4O06_07460 PF01706 FliG C-terminal domain E4O06_07465 PF08345 Flagellar M-ring protein C-terminal E4O06_07465 PF01514 Secretory protein of YscJ/FliF family E4O06_07470 PF02049 Flagellar hook-basal body complex protein FliE E4O06_07475 PF00460 Flagella basal body rod protein E4O06_07475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O06_07480 PF00460 Flagella basal body rod protein E4O06_07485 PF07724 AAA domain (Cdc48 subfamily) E4O06_07485 PF00004 ATPase family associated with various cellular activities (AAA) E4O06_07490 PF00227 Proteasome subunit E4O06_07495 PF02899 Phage integrase, N-terminal SAM-like domain E4O06_07495 PF00589 Phage integrase family E4O06_07500 PF01131 DNA topoisomerase E4O06_07500 PF01751 Toprim domain E4O06_07500 PF01396 Topoisomerase DNA binding C4 zinc finger E4O06_07505 PF02481 DNA recombination-mediator protein A E4O06_07505 PF17782 DprA winged helix domain E4O06_07515 PF02899 Phage integrase, N-terminal SAM-like domain E4O06_07515 PF00589 Phage integrase family E4O06_07520 PF12327 FtsZ family, C-terminal domain E4O06_07520 PF00091 Tubulin/FtsZ family, GTPase domain E4O06_07525 PF02491 SHS2 domain inserted in FTSA E4O06_07535 PF01098 Cell cycle protein E4O06_07540 PF02875 Mur ligase family, glutamate ligase domain E4O06_07540 PF08245 Mur ligase middle domain E4O06_07540 PF01225 Mur ligase family, catalytic domain E4O06_07550 PF01795 MraW methylase family E4O06_07555 PF02381 MraZ protein, putative antitoxin-like E4O06_07560 PF00326 Prolyl oligopeptidase family E4O06_07560 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O06_07595 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4O06_07595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4O06_07595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4O06_07605 PF02233 NAD(P) transhydrogenase beta subunit E4O06_07640 PF04055 Radical SAM superfamily E4O06_07645 PF00118 TCP-1/cpn60 chaperonin family E4O06_07660 PF01264 Chorismate synthase E4O06_07665 PF02390 Putative methyltransferase E4O06_07705 PF01740 STAS domain E4O06_07725 PF01212 Beta-eliminating lyase E4O06_07730 PF05191 Adenylate kinase, active site lid E4O06_07745 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4O06_07745 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4O06_07750 PF02576 RimP N-terminal domain E4O06_07750 PF17384 RimP C-terminal SH3 domain E4O06_07755 PF00575 S1 RNA binding domain E4O06_07755 PF13184 NusA-like KH domain E4O06_07755 PF08529 NusA N-terminal domain E4O06_07760 PF00009 Elongation factor Tu GTP binding domain E4O06_07760 PF11987 Translation-initiation factor 2 E4O06_07760 PF04760 Translation initiation factor IF-2, N-terminal region E4O06_07765 PF02033 Ribosome-binding factor A E4O06_07770 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4O06_07780 PF00005 ABC transporter E4O06_07785 PF00005 ABC transporter E4O06_07785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_07790 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O06_07790 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_07795 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_07800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O06_07805 PF12833 Helix-turn-helix domain E4O06_07805 PF01965 DJ-1/PfpI family E4O06_07830 PF02401 LytB protein E4O06_07835 PF00842 Alanine racemase, C-terminal domain E4O06_07835 PF01168 Alanine racemase, N-terminal domain E4O06_07845 PF16258 Domain of unknown function (DUF4912) E4O06_07860 PF03129 Anticodon binding domain E4O06_07860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O06_07860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O06_07880 PF08340 Domain of unknown function (DUF1732) E4O06_07880 PF03755 YicC-like family, N-terminal region E4O06_07885 PF02875 Mur ligase family, glutamate ligase domain E4O06_07885 PF01225 Mur ligase family, catalytic domain E4O06_07885 PF08245 Mur ligase middle domain E4O06_07890 PF02875 Mur ligase family, glutamate ligase domain E4O06_07890 PF08245 Mur ligase middle domain E4O06_07895 PF00849 RNA pseudouridylate synthase E4O06_07895 PF01479 S4 domain E4O06_07900 PF00849 RNA pseudouridylate synthase E4O06_07910 PF00398 Ribosomal RNA adenine dimethylase E4O06_07915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4O06_07920 PF00258 Flavodoxin E4O06_07920 PF00753 Metallo-beta-lactamase superfamily E4O06_07925 PF00005 ABC transporter E4O06_07925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_07930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_07930 PF00005 ABC transporter E4O06_07935 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_07935 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O06_07940 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_07950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O06_07955 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_07960 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_07960 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O06_07965 PF00005 ABC transporter E4O06_07965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_07970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_07970 PF00005 ABC transporter E4O06_07990 PF09334 tRNA synthetases class I (M) E4O06_07990 PF01588 Putative tRNA binding domain E4O06_08000 PF00005 ABC transporter E4O06_08005 PF00005 ABC transporter E4O06_08020 PF01554 MatE E4O06_08025 PF00672 HAMP domain E4O06_08025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_08025 PF02743 Cache domain E4O06_08040 PF13276 HTH-like domain E4O06_08040 PF00665 Integrase core domain E4O06_08040 PF13333 Integrase core domain E4O06_08060 PF00301 Rubredoxin E4O06_08075 PF00679 Elongation factor G C-terminus E4O06_08075 PF14492 Elongation Factor G, domain II E4O06_08075 PF03764 Elongation factor G, domain IV E4O06_08075 PF00009 Elongation factor Tu GTP binding domain E4O06_08075 PF03144 Elongation factor Tu domain 2 E4O06_08080 PF00177 Ribosomal protein S7p/S5e E4O06_08085 PF00164 Ribosomal protein S12/S23 E4O06_08115 PF00436 Single-strand binding protein family E4O06_08350 PF11756 Nitrous oxide-stimulated promoter E4O06_08355 PF04304 Protein of unknown function (DUF454) E4O06_08360 PF03932 CutC family E4O06_08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_08370 PF01751 Toprim domain E4O06_08370 PF00986 DNA gyrase B subunit, carboxyl terminus E4O06_08370 PF00204 DNA gyrase B E4O06_08385 PF00899 ThiF family E4O06_08390 PF00953 Glycosyl transferase family 4 E4O06_08400 PF00860 Permease family E4O06_08420 PF02872 5'-nucleotidase, C-terminal domain E4O06_08420 PF17936 Bacterial Ig domain E4O06_08420 PF00149 Calcineurin-like phosphoesterase E4O06_08435 PF16325 Peptidase family U32 C-terminal domain E4O06_08435 PF01136 Peptidase family U32 E4O06_08440 PF07859 alpha/beta hydrolase fold E4O06_08445 PF00664 ABC transporter transmembrane region E4O06_08445 PF00005 ABC transporter E4O06_08450 PF01725 Ham1 family E4O06_08460 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4O06_08465 PF01416 tRNA pseudouridine synthase E4O06_08475 PF02146 Sir2 family E4O06_08480 PF08668 HDOD domain E4O06_08495 PF00152 tRNA synthetases class II (D, K and N) E4O06_08500 PF02687 FtsX-like permease family E4O06_08500 PF12704 MacB-like periplasmic core domain E4O06_08500 PF00005 ABC transporter E4O06_08505 PF00005 ABC transporter E4O06_08520 PF03819 MazG nucleotide pyrophosphohydrolase domain E4O06_08525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O06_08525 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4O06_08530 PF03129 Anticodon binding domain E4O06_08530 PF02824 TGS domain E4O06_08530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O06_08530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O06_08540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4O06_08540 PF02542 YgbB family E4O06_08545 PF02542 YgbB family E4O06_08560 PF00924 Mechanosensitive ion channel E4O06_08575 PF10509 Galactokinase galactose-binding signature E4O06_08575 PF08544 GHMP kinases C terminal E4O06_08580 PF00795 Carbon-nitrogen hydrolase E4O06_08585 PF00595 PDZ domain E4O06_08595 PF00072 Response regulator receiver domain E4O06_08600 PF02021 Uncharacterised protein family UPF0102 E4O06_08615 PF02403 Seryl-tRNA synthetase N-terminal domain E4O06_08615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O06_08635 PF01590 GAF domain E4O06_08635 PF00158 Sigma-54 interaction domain E4O06_08640 PF01168 Alanine racemase, N-terminal domain E4O06_08660 PF03006 Haemolysin-III related E4O06_08665 PF01551 Peptidase family M23 E4O06_08665 PF10145 Phage-related minor tail protein E4O06_08665 PF01464 Transglycosylase SLT domain E4O06_08690 PF00924 Mechanosensitive ion channel E4O06_08695 PF00072 Response regulator receiver domain E4O06_08695 PF00196 Bacterial regulatory proteins, luxR family E4O06_08705 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O06_08710 PF02743 Cache domain E4O06_08710 PF00672 HAMP domain E4O06_08710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_08715 PF10431 C-terminal, D2-small domain, of ClpB protein E4O06_08715 PF00004 ATPase family associated with various cellular activities (AAA) E4O06_08715 PF07724 AAA domain (Cdc48 subfamily) E4O06_08715 PF17871 AAA lid domain E4O06_08715 PF02861 Clp amino terminal domain, pathogenicity island component E4O06_08720 PF03806 AbgT putative transporter family E4O06_08730 PF03601 Conserved hypothetical protein 698 E4O06_08740 PF02254 TrkA-N domain E4O06_08740 PF07885 Ion channel E4O06_08745 PF05343 M42 glutamyl aminopeptidase E4O06_08760 PF00155 Aminotransferase class I and II E4O06_08780 PF00343 Carbohydrate phosphorylase E4O06_08800 PF05000 RNA polymerase Rpb1, domain 4 E4O06_08800 PF04998 RNA polymerase Rpb1, domain 5 E4O06_08800 PF04997 RNA polymerase Rpb1, domain 1 E4O06_08800 PF00623 RNA polymerase Rpb1, domain 2 E4O06_08800 PF04983 RNA polymerase Rpb1, domain 3 E4O06_08805 PF04563 RNA polymerase beta subunit E4O06_08805 PF04561 RNA polymerase Rpb2, domain 2 E4O06_08805 PF04565 RNA polymerase Rpb2, domain 3 E4O06_08805 PF10385 RNA polymerase beta subunit external 1 domain E4O06_08805 PF00562 RNA polymerase Rpb2, domain 6 E4O06_08805 PF04560 RNA polymerase Rpb2, domain 7 E4O06_08810 PF16320 Ribosomal protein L7/L12 dimerisation domain E4O06_08810 PF00542 Ribosomal protein L7/L12 C-terminal domain E4O06_08815 PF00466 Ribosomal protein L10 E4O06_08820 PF00687 Ribosomal protein L1p/L10e family E4O06_08825 PF00298 Ribosomal protein L11, RNA binding domain E4O06_08825 PF03946 Ribosomal protein L11, N-terminal domain E4O06_08830 PF00467 KOW motif E4O06_08830 PF02357 Transcription termination factor nusG E4O06_08835 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4O06_08845 PF00471 Ribosomal protein L33 E4O06_08865 PF00005 ABC transporter E4O06_08865 PF00664 ABC transporter transmembrane region E4O06_08865 PF03412 Peptidase C39 family E4O06_08880 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain E4O06_08880 PF01522 Polysaccharide deacetylase E4O06_08895 PF00664 ABC transporter transmembrane region E4O06_08895 PF03412 Peptidase C39 family E4O06_08895 PF00005 ABC transporter E4O06_08920 PF01381 Helix-turn-helix E4O06_08930 PF03949 Malic enzyme, NAD binding domain E4O06_08930 PF00390 Malic enzyme, N-terminal domain E4O06_08935 PF01202 Shikimate kinase E4O06_08945 PF08011 PD-(D/E)XK nuclease superfamily E4O06_08945 PF09820 Predicted AAA-ATPase E4O06_08950 PF01871 AMMECR1 E4O06_08950 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4O06_08955 PF12796 Ankyrin repeats (3 copies) E4O06_08960 PF02547 Queuosine biosynthesis protein E4O06_08970 PF00005 ABC transporter E4O06_08980 PF00005 ABC transporter E4O06_09030 PF00266 Aminotransferase class-V E4O06_09050 PF01206 Sulfurtransferase TusA E4O06_09065 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4O06_09065 PF02772 S-adenosylmethionine synthetase, central domain E4O06_09065 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4O06_09080 PF00183 Hsp90 protein E4O06_09115 PF01165 Ribosomal protein S21 E4O06_09120 PF01554 MatE E4O06_09125 PF00696 Amino acid kinase family E4O06_09130 PF12390 Selenocysteine synthase N terminal E4O06_09130 PF03841 L-seryl-tRNA selenium transferase E4O06_09135 PF09820 Predicted AAA-ATPase E4O06_09135 PF08011 PD-(D/E)XK nuclease superfamily E4O06_09140 PF01541 GIY-YIG catalytic domain E4O06_09140 PF02151 UvrB/uvrC motif E4O06_09140 PF08459 UvrC Helix-hairpin-helix N-terminal E4O06_09155 PF07715 TonB-dependent Receptor Plug Domain E4O06_09155 PF00593 TonB dependent receptor E4O06_09165 PF02472 Biopolymer transport protein ExbD/TolR E4O06_09170 PF01618 MotA/TolQ/ExbB proton channel family E4O06_09190 PF12106 Colicin E5 ribonuclease domain E4O06_09195 PF11480 Colicin-E5 Imm protein E4O06_09225 PF05593 RHS Repeat E4O06_09225 PF05488 PAAR motif E4O06_09260 PF00580 UvrD/REP helicase N-terminal domain E4O06_09260 PF13361 UvrD-like helicase C-terminal domain E4O06_09265 PF00664 ABC transporter transmembrane region E4O06_09265 PF00005 ABC transporter E4O06_09270 PF00005 ABC transporter E4O06_09270 PF00664 ABC transporter transmembrane region E4O06_09275 PF00375 Sodium:dicarboxylate symporter family E4O06_09280 PF02073 Thermophilic metalloprotease (M29) E4O06_09285 PF10135 Rod binding protein E4O06_09290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O06_09290 PF00460 Flagella basal body rod protein E4O06_09295 PF00460 Flagella basal body rod protein E4O06_09295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O06_09300 PF00669 Bacterial flagellin N-terminal helical region E4O06_09300 PF00700 Bacterial flagellin C-terminal helical region E4O06_09305 PF00156 Phosphoribosyl transferase domain E4O06_09310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4O06_09310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4O06_09315 PF01226 Formate/nitrite transporter E4O06_09320 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4O06_09320 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4O06_09325 PF01204 Trehalase E4O06_09340 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4O06_09350 PF00830 Ribosomal L28 family E4O06_09360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_09360 PF00005 ABC transporter E4O06_09365 PF00005 ABC transporter E4O06_09365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_09370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O06_09375 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O06_09375 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_09380 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_09385 PF01180 Dihydroorotate dehydrogenase E4O06_09395 PF00152 tRNA synthetases class II (D, K and N) E4O06_09395 PF01336 OB-fold nucleic acid binding domain E4O06_09400 PF00768 D-alanyl-D-alanine carboxypeptidase E4O06_09400 PF07943 Penicillin-binding protein 5, C-terminal domain E4O06_09405 PF04002 RadC-like JAB domain E4O06_09410 PF00156 Phosphoribosyl transferase domain E4O06_09415 PF03485 Arginyl tRNA synthetase N terminal domain E4O06_09415 PF05746 DALR anticodon binding domain E4O06_09415 PF00750 tRNA synthetases class I (R) E4O06_09420 PF08207 Elongation factor P (EF-P) KOW-like domain E4O06_09420 PF01132 Elongation factor P (EF-P) OB domain E4O06_09420 PF09285 Elongation factor P, C-terminal E4O06_09435 PF13277 YmdB-like protein E4O06_09445 PF11799 impB/mucB/samB family C-terminal domain E4O06_09445 PF11798 IMS family HHH motif E4O06_09445 PF00817 impB/mucB/samB family E4O06_09460 PF03102 NeuB family E4O06_09460 PF08666 SAF domain E4O06_09465 PF07009 NusG domain II E4O06_09470 PF01734 Patatin-like phospholipase E4O06_09475 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O06_09480 PF04011 LemA family E4O06_09485 PF02653 Branched-chain amino acid transport system / permease component E4O06_09490 PF02653 Branched-chain amino acid transport system / permease component E4O06_09495 PF00005 ABC transporter E4O06_09500 PF02608 ABC transporter substrate-binding protein PnrA-like E4O06_09705 PF05785 Rho-activating domain of cytotoxic necrotizing factor E4O06_09705 PF18807 Tripartite Tc toxins repeat E4O06_09760 PF05785 Rho-activating domain of cytotoxic necrotizing factor E4O06_09760 PF18807 Tripartite Tc toxins repeat E4O06_09795 PF00113 Enolase, C-terminal TIM barrel domain E4O06_09795 PF03952 Enolase, N-terminal domain E4O06_09810 PF00679 Elongation factor G C-terminus E4O06_09810 PF14492 Elongation Factor G, domain II E4O06_09810 PF03764 Elongation factor G, domain IV E4O06_09810 PF00009 Elongation factor Tu GTP binding domain E4O06_09810 PF03144 Elongation factor Tu domain 2 E4O06_09825 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_09845 PF00501 AMP-binding enzyme E4O06_09845 PF13193 AMP-binding enzyme C-terminal domain E4O06_09850 PF00877 NlpC/P60 family E4O06_09860 PF01963 TraB family E4O06_09865 PF02926 THUMP domain E4O06_09865 PF01170 Putative RNA methylase family UPF0020 E4O06_09870 PF03979 Sigma-70 factor, region 1.1 E4O06_09870 PF00140 Sigma-70 factor, region 1.2 E4O06_09870 PF04542 Sigma-70 region 2 E4O06_09870 PF04539 Sigma-70 region 3 E4O06_09870 PF04545 Sigma-70, region 4 E4O06_09875 PF00166 Chaperonin 10 Kd subunit E4O06_09895 PF00871 Acetokinase family E4O06_09900 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O06_09905 PF01554 MatE E4O06_09910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O06_09910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O06_09940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O06_09940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O06_09945 PF00005 ABC transporter E4O06_09960 PF07687 Peptidase dimerisation domain E4O06_09960 PF01546 Peptidase family M20/M25/M40 E4O06_09990 PF00664 ABC transporter transmembrane region E4O06_09990 PF00005 ABC transporter E4O06_09995 PF04954 Siderophore-interacting protein E4O06_09995 PF08021 Siderophore-interacting FAD-binding domain E4O06_09995 PF00664 ABC transporter transmembrane region E4O06_09995 PF00005 ABC transporter E4O06_10010 PF00005 ABC transporter E4O06_10035 PF02311 AraC-like ligand binding domain E4O06_10035 PF12833 Helix-turn-helix domain E4O06_10040 PF01734 Patatin-like phospholipase E4O06_10070 PF13361 UvrD-like helicase C-terminal domain E4O06_10070 PF00580 UvrD/REP helicase N-terminal domain E4O06_10095 PF01245 Ribosomal protein L19 E4O06_10100 PF01746 tRNA (Guanine-1)-methyltransferase E4O06_10105 PF01782 RimM N-terminal domain E4O06_10115 PF00886 Ribosomal protein S16 E4O06_10120 PF02277 Phosphoribosyltransferase E4O06_10125 PF01381 Helix-turn-helix E4O06_10145 PF00849 RNA pseudouridylate synthase E4O06_10145 PF01479 S4 domain E4O06_10150 PF04079 Segregation and condensation complex subunit ScpB E4O06_10155 PF02616 Segregation and condensation protein ScpA E4O06_10160 PF00154 recA bacterial DNA recombination protein E4O06_10175 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_10175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O06_10195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O06_10195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O06_10195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O06_10195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O06_10200 PF02308 MgtC family E4O06_10215 PF04055 Radical SAM superfamily E4O06_10230 PF00730 HhH-GPD superfamily base excision DNA repair protein E4O06_10235 PF00224 Pyruvate kinase, barrel domain E4O06_10235 PF02887 Pyruvate kinase, alpha/beta domain E4O06_10235 PF00391 PEP-utilising enzyme, mobile domain E4O06_10255 PF00342 Phosphoglucose isomerase E4O06_10260 PF01926 50S ribosome-binding GTPase E4O06_10270 PF01479 S4 domain E4O06_10270 PF00849 RNA pseudouridylate synthase E4O06_10275 PF00271 Helicase conserved C-terminal domain E4O06_10275 PF00270 DEAD/DEAH box helicase E4O06_10275 PF17191 RecG wedge domain E4O06_10280 PF00990 Diguanylate cyclase, GGDEF domain E4O06_10285 PF00990 Diguanylate cyclase, GGDEF domain E4O06_10300 PF03577 Peptidase family C69 E4O06_10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_10305 PF17202 Single cache domain 3 E4O06_10305 PF00672 HAMP domain E4O06_10310 PF12169 DNA polymerase III subunits gamma and tau domain III E4O06_10325 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O06_10330 PF12368 Rhodanase C-terminal E4O06_10330 PF00581 Rhodanese-like domain E4O06_10330 PF17773 UPF0176 acylphosphatase like domain E4O06_10335 PF01624 MutS domain I E4O06_10335 PF05188 MutS domain II E4O06_10335 PF05192 MutS domain III E4O06_10335 PF00488 MutS domain V E4O06_10335 PF05190 MutS family domain IV E4O06_10345 PF01103 Surface antigen E4O06_10345 PF07244 Surface antigen variable number repeat E4O06_10355 PF02223 Thymidylate kinase E4O06_10365 PF00834 Ribulose-phosphate 3 epimerase family E4O06_10385 PF00158 Sigma-54 interaction domain E4O06_10385 PF02954 Bacterial regulatory protein, Fis family E4O06_10385 PF13185 GAF domain E4O06_10390 PF03880 DbpA RNA binding domain E4O06_10400 PF07670 Nucleoside recognition E4O06_10405 PF01906 Putative heavy-metal-binding E4O06_10410 PF01175 Urocanase Rossmann-like domain E4O06_10410 PF17392 Urocanase C-terminal domain E4O06_10410 PF17391 Urocanase N-terminal domain E4O06_10415 PF13649 Methyltransferase domain E4O06_10420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_10420 PF00672 HAMP domain E4O06_10420 PF02743 Cache domain E4O06_10435 PF00919 Uncharacterized protein family UPF0004 E4O06_10435 PF18693 TRAM domain E4O06_10435 PF04055 Radical SAM superfamily E4O06_10455 PF02424 ApbE family E4O06_10460 PF01252 Signal peptidase (SPase) II E4O06_10465 PF13545 Crp-like helix-turn-helix domain E4O06_10465 PF00027 Cyclic nucleotide-binding domain E4O06_10475 PF02811 PHP domain E4O06_10480 PF05958 tRNA (Uracil-5-)-methyltransferase E4O06_10490 PF01145 SPFH domain / Band 7 family E4O06_10495 PF01145 SPFH domain / Band 7 family E4O06_10515 PF00005 ABC transporter E4O06_10520 PF08543 Phosphomethylpyrimidine kinase E4O06_10530 PF01636 Phosphotransferase enzyme family E4O06_10540 PF00731 AIR carboxylase E4O06_10545 PF01259 SAICAR synthetase E4O06_10555 PF00436 Single-strand binding protein family E4O06_10560 PF02699 Preprotein translocase subunit E4O06_10565 PF02355 Protein export membrane protein E4O06_10570 PF02355 Protein export membrane protein E4O06_10575 PF00266 Aminotransferase class-V E4O06_10585 PF01206 Sulfurtransferase TusA E4O06_10620 PF00004 ATPase family associated with various cellular activities (AAA) E4O06_10620 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O06_10620 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4O06_10650 PF01458 Uncharacterized protein family (UPF0051) E4O06_10655 PF00005 ABC transporter E4O06_10690 PF03390 2-hydroxycarboxylate transporter family E4O06_10730 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O06_10730 PF00588 SpoU rRNA Methylase family E4O06_10735 PF13419 Haloacid dehalogenase-like hydrolase E4O06_10745 PF00571 CBS domain E4O06_10745 PF01769 Divalent cation transporter E4O06_10745 PF03448 MgtE intracellular N domain E4O06_10755 PF04452 RNA methyltransferase E4O06_10780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O06_10780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O06_10785 PF14572 Phosphoribosyl synthetase-associated domain E4O06_10785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4O06_10790 PF00990 Diguanylate cyclase, GGDEF domain E4O06_10790 PF00072 Response regulator receiver domain E4O06_10795 PF00563 EAL domain E4O06_10795 PF00990 Diguanylate cyclase, GGDEF domain E4O06_10800 PF03193 RsgA GTPase E4O06_10810 PF01026 TatD related DNase E4O06_10815 PF01207 Dihydrouridine synthase (Dus) E4O06_10835 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_10840 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_10845 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_10850 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_10855 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_10860 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_10890 PF02899 Phage integrase, N-terminal SAM-like domain E4O06_10890 PF00589 Phage integrase family E4O06_10900 PF01420 Type I restriction modification DNA specificity domain E4O06_10905 PF13018 Extended Signal Peptide of Type V secretion system E4O06_10905 PF02661 Fic/DOC family E4O06_10905 PF13332 Hemagglutinin repeat E4O06_10905 PF05860 haemagglutination activity domain E4O06_10905 PF03543 Yersinia/Haemophilus virulence surface antigen E4O06_10910 PF02384 N-6 DNA Methylase E4O06_10910 PF12161 HsdM N-terminal domain E4O06_10915 PF08463 EcoEI R protein C-terminal E4O06_10915 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) E4O06_10915 PF04851 Type III restriction enzyme, res subunit E4O06_10915 PF00271 Helicase conserved C-terminal domain E4O06_10935 PF13167 GTP-binding GTPase N-terminal E4O06_10935 PF16360 GTP-binding GTPase Middle Region E4O06_10935 PF01926 50S ribosome-binding GTPase E4O06_10955 PF01551 Peptidase family M23 E4O06_10955 PF04225 Opacity-associated protein A LysM-like domain E4O06_10960 PF02423 Ornithine cyclodeaminase/mu-crystallin family E4O06_10965 PF01235 Sodium:alanine symporter family E4O06_10970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O06_10975 PF00813 FliP family E4O06_10985 PF04509 CheC-like family E4O06_10985 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O06_10990 PF02154 Flagellar motor switch protein FliM E4O06_10990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O06_10995 PF03748 Flagellar basal body-associated protein FliL E4O06_11000 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4O06_11000 PF00691 OmpA family E4O06_11005 PF01618 MotA/TolQ/ExbB proton channel family E4O06_11015 PF00460 Flagella basal body rod protein E4O06_11015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O06_11015 PF07559 Flagellar basal body protein FlaE E4O06_11020 PF03963 Flagellar hook capping protein - N-terminal region E4O06_11040 PF03030 Inorganic H+ pyrophosphatase E4O06_11060 PF01339 CheB methylesterase E4O06_11060 PF00072 Response regulator receiver domain E4O06_11065 PF01739 CheR methyltransferase, SAM binding domain E4O06_11065 PF03705 CheR methyltransferase, all-alpha domain E4O06_11080 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O06_11080 PF00005 ABC transporter E4O06_11085 PF01195 Peptidyl-tRNA hydrolase E4O06_11095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O06_11100 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_11105 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O06_11105 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_11110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_11110 PF00005 ABC transporter E4O06_11115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_11115 PF00005 ABC transporter E4O06_11125 PF01545 Cation efflux family E4O06_11125 PF16916 Dimerisation domain of Zinc Transporter E4O06_11150 PF00684 DnaJ central domain E4O06_11150 PF01556 DnaJ C terminal domain E4O06_11150 PF00226 DnaJ domain E4O06_11155 PF00012 Hsp70 protein E4O06_11160 PF01025 GrpE E4O06_11165 PF02661 Fic/DOC family E4O06_11165 PF12728 Helix-turn-helix domain E4O06_11175 PF00005 ABC transporter E4O06_11180 PF02571 Precorrin-6x reductase CbiJ/CobK E4O06_11185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4O06_11185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O06_11190 PF08011 PD-(D/E)XK nuclease superfamily E4O06_11190 PF09820 Predicted AAA-ATPase E4O06_11205 PF01554 MatE E4O06_11215 PF11760 Cobalamin synthesis G N-terminal E4O06_11215 PF11761 Cobalamin biosynthesis central region E4O06_11215 PF01890 Cobalamin synthesis G C-terminus E4O06_11220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O06_11225 PF00005 ABC transporter E4O06_11225 PF00664 ABC transporter transmembrane region E4O06_11230 PF00005 ABC transporter E4O06_11230 PF16326 ABC transporter C-terminal domain E4O06_11230 PF12848 ABC transporter E4O06_11250 PF13614 AAA domain E4O06_11255 PF02195 ParB-like nuclease domain E4O06_11255 PF17762 HTH domain found in ParB protein E4O06_11290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O06_11290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4O06_11295 PF00698 Acyl transferase domain E4O06_11310 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4O06_11310 PF07055 Enoyl reductase FAD binding domain E4O06_11310 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4O06_11320 PF00270 DEAD/DEAH box helicase E4O06_11320 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O06_11320 PF17191 RecG wedge domain E4O06_11345 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_11360 PF00364 Biotin-requiring enzyme E4O06_11365 PF02785 Biotin carboxylase C-terminal domain E4O06_11365 PF00289 Biotin carboxylase, N-terminal domain E4O06_11365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4O06_11370 PF01039 Carboxyl transferase domain E4O06_11375 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4O06_11380 PF00221 Aromatic amino acid lyase E4O06_11395 PF03773 Predicted permease E4O06_11405 PF07726 ATPase family associated with various cellular activities (AAA) E4O06_11405 PF17863 AAA lid domain E4O06_11445 PF01425 Amidase E4O06_11450 PF02637 GatB domain E4O06_11450 PF02934 GatB/GatE catalytic domain E4O06_11505 PF05488 PAAR motif E4O06_11505 PF05593 RHS Repeat E4O06_11520 PF05593 RHS Repeat E4O06_11520 PF05488 PAAR motif E4O06_11530 PF05488 PAAR motif E4O06_11530 PF05593 RHS Repeat E4O06_11585 PF05593 RHS Repeat E4O06_11585 PF03527 RHS protein E4O06_11595 PF03527 RHS protein E4O06_11595 PF05593 RHS Repeat E4O06_11660 PF00270 DEAD/DEAH box helicase E4O06_11660 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O06_11660 PF17191 RecG wedge domain E4O06_11705 PF00672 HAMP domain E4O06_11705 PF02743 Cache domain E4O06_11705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_11740 PF12705 PD-(D/E)XK nuclease superfamily E4O06_11740 PF00580 UvrD/REP helicase N-terminal domain E4O06_11740 PF13361 UvrD-like helicase C-terminal domain E4O06_11745 PF12705 PD-(D/E)XK nuclease superfamily E4O06_11750 PF02254 TrkA-N domain E4O06_11750 PF02080 TrkA-C domain E4O06_11755 PF02386 Cation transport protein E4O06_11760 PF01841 Transglutaminase-like superfamily E4O06_11775 PF09190 DALR domain E4O06_11775 PF01406 tRNA synthetases class I (C) catalytic domain E4O06_11780 PF01565 FAD binding domain E4O06_11780 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4O06_11790 PF13173 AAA domain E4O06_11790 PF13635 Domain of unknown function (DUF4143) E4O06_11795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O06_11795 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_11815 PF01555 DNA methylase E4O06_11820 PF00326 Prolyl oligopeptidase family E4O06_11820 PF07676 WD40-like Beta Propeller Repeat E4O06_11825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4O06_11825 PF00128 Alpha amylase, catalytic domain E4O06_11835 PF00266 Aminotransferase class-V E4O06_11840 PF01761 3-dehydroquinate synthase E4O06_11845 PF01048 Phosphorylase superfamily E4O06_11850 PF09820 Predicted AAA-ATPase E4O06_11850 PF08011 PD-(D/E)XK nuclease superfamily E4O06_11865 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O06_11870 PF03466 LysR substrate binding domain E4O06_11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4O06_11880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O06_11885 PF00005 ABC transporter E4O06_11885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_11890 PF00005 ABC transporter E4O06_11890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O06_11895 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_11895 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O06_11900 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_11915 PF00005 ABC transporter E4O06_11920 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_11925 PF08402 TOBE domain E4O06_11925 PF00005 ABC transporter E4O06_11930 PF13439 Glycosyltransferase Family 4 E4O06_11930 PF00534 Glycosyl transferases group 1 E4O06_11945 PF03577 Peptidase family C69 E4O06_11950 PF08245 Mur ligase middle domain E4O06_11950 PF02875 Mur ligase family, glutamate ligase domain E4O06_11990 PF03023 Lipid II flippase MurJ E4O06_11995 PF03616 Sodium/glutamate symporter E4O06_12005 PF00672 HAMP domain E4O06_12005 PF02743 Cache domain E4O06_12005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_12010 PF02867 Ribonucleotide reductase, barrel domain E4O06_12010 PF00317 Ribonucleotide reductase, all-alpha domain E4O06_12010 PF03477 ATP cone domain E4O06_12015 PF00274 Fructose-bisphosphate aldolase class-I E4O06_12025 PF00009 Elongation factor Tu GTP binding domain E4O06_12025 PF03144 Elongation factor Tu domain 2 E4O06_12025 PF03764 Elongation factor G, domain IV E4O06_12025 PF00679 Elongation factor G C-terminus E4O06_12025 PF14492 Elongation Factor G, domain II E4O06_12075 PF02080 TrkA-C domain E4O06_12075 PF02254 TrkA-N domain E4O06_12080 PF03989 DNA gyrase C-terminal domain, beta-propeller E4O06_12080 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O06_12085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4O06_12090 PF01594 AI-2E family transporter E4O06_12095 PF00268 Ribonucleotide reductase, small chain E4O06_12100 PF00672 HAMP domain E4O06_12100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_12100 PF02203 Tar ligand binding domain homologue E4O06_12105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O06_12110 PF04542 Sigma-70 region 2 E4O06_12110 PF08281 Sigma-70, region 4 E4O06_12130 PF01554 MatE E4O06_12135 PF00440 Bacterial regulatory proteins, tetR family E4O06_12145 PF09827 CRISPR associated protein Cas2 E4O06_12150 PF01867 CRISPR associated protein Cas1 E4O06_12155 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 E4O06_12155 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 E4O06_12155 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 E4O06_12155 PF13395 HNH endonuclease E4O06_12165 PF00570 HRDC domain E4O06_12165 PF16124 RecQ zinc-binding E4O06_12165 PF00271 Helicase conserved C-terminal domain E4O06_12165 PF00270 DEAD/DEAH box helicase E4O06_12165 PF09382 RQC domain E4O06_12180 PF00571 CBS domain E4O06_12180 PF03471 Transporter associated domain E4O06_12180 PF01595 Cyclin M transmembrane N-terminal domain E4O06_12185 PF00571 CBS domain E4O06_12185 PF03471 Transporter associated domain E4O06_12185 PF01595 Cyclin M transmembrane N-terminal domain E4O06_12190 PF07726 ATPase family associated with various cellular activities (AAA) E4O06_12190 PF17863 AAA lid domain E4O06_12200 PF02254 TrkA-N domain E4O06_12200 PF02080 TrkA-C domain E4O06_12205 PF02386 Cation transport protein E4O06_12210 PF02511 Thymidylate synthase complementing protein E4O06_12255 PF00005 ABC transporter E4O06_12270 PF01343 Peptidase family S49 E4O06_12275 PF06071 Protein of unknown function (DUF933) E4O06_12275 PF01926 50S ribosome-binding GTPase E4O06_12285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_12285 PF02743 Cache domain E4O06_12285 PF00672 HAMP domain E4O06_12295 PF03781 Sulfatase-modifying factor enzyme 1 E4O06_12330 PF01470 Pyroglutamyl peptidase E4O06_12345 PF00005 ABC transporter E4O06_12345 PF08402 TOBE domain E4O06_12350 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_12370 PF00962 Adenosine/AMP deaminase E4O06_12375 PF01925 Sulfite exporter TauE/SafE E4O06_12380 PF00892 EamA-like transporter family E4O06_12405 PF13651 Adenine-specific methyltransferase EcoRI E4O06_12410 PF13651 Adenine-specific methyltransferase EcoRI E4O06_12420 PF09820 Predicted AAA-ATPase E4O06_12420 PF08011 PD-(D/E)XK nuclease superfamily E4O06_12440 PF00664 ABC transporter transmembrane region E4O06_12440 PF00005 ABC transporter E4O06_12450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O06_12465 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4O06_12475 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O06_12475 PF00069 Protein kinase domain E4O06_12485 PF02595 Glycerate kinase family E4O06_12490 PF05656 Protein of unknown function (DUF805) E4O06_12495 PF03600 Citrate transporter E4O06_12500 PF12557 Cob(I)alamin adenosyltransferase N terminal E4O06_12500 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E4O06_12525 PF07238 PilZ domain E4O06_12565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4O06_12565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4O06_12585 PF02661 Fic/DOC family E4O06_12595 PF01850 PIN domain E4O06_12630 PF02463 RecF/RecN/SMC N terminal domain E4O06_12635 PF00712 DNA polymerase III beta subunit, N-terminal domain E4O06_12635 PF02768 DNA polymerase III beta subunit, C-terminal domain E4O06_12635 PF02767 DNA polymerase III beta subunit, central domain E4O06_12640 PF01661 Macro domain E4O06_12645 PF02661 Fic/DOC family E4O06_12645 PF13784 Fic/DOC family N-terminal E4O06_12660 PF01966 HD domain E4O06_12660 PF00013 KH domain E4O06_12660 PF12072 Domain of unknown function (DUF3552) E4O06_12670 PF02504 Fatty acid synthesis protein E4O06_12675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O06_12680 PF02673 Bacitracin resistance protein BacA E4O06_12685 PF01580 FtsK/SpoIIIE family E4O06_12685 PF17854 FtsK alpha domain E4O06_12685 PF09397 Ftsk gamma domain E4O06_12690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4O06_12690 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4O06_12690 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4O06_12695 PF00990 Diguanylate cyclase, GGDEF domain E4O06_12700 PF00883 Cytosol aminopeptidase family, catalytic domain E4O06_12700 PF02789 Cytosol aminopeptidase family, N-terminal domain E4O06_12705 PF01066 CDP-alcohol phosphatidyltransferase E4O06_12760 PF02743 Cache domain E4O06_12760 PF00672 HAMP domain E4O06_12760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_12765 PF01048 Phosphorylase superfamily E4O06_12790 PF02971 Formiminotransferase domain E4O06_12790 PF07837 Formiminotransferase domain, N-terminal subdomain E4O06_12795 PF00672 HAMP domain E4O06_12795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_12795 PF02743 Cache domain E4O06_12805 PF01212 Beta-eliminating lyase E4O06_12825 PF00106 short chain dehydrogenase E4O06_12830 PF13411 MerR HTH family regulatory protein E4O06_12875 PF13411 MerR HTH family regulatory protein E4O06_12905 PF00664 ABC transporter transmembrane region E4O06_12905 PF00005 ABC transporter E4O06_12910 PF00664 ABC transporter transmembrane region E4O06_12910 PF00005 ABC transporter E4O06_12915 PF00005 ABC transporter E4O06_12930 PF13476 AAA domain E4O06_12935 PF00149 Calcineurin-like phosphoesterase E4O06_12940 PF17202 Single cache domain 3 E4O06_12940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_12940 PF00672 HAMP domain E4O06_12945 PF07702 UTRA domain E4O06_12945 PF00392 Bacterial regulatory proteins, gntR family E4O06_12950 PF00005 ABC transporter E4O06_12960 PF00664 ABC transporter transmembrane region E4O06_12960 PF00005 ABC transporter E4O06_12965 PF16864 Dimerisation domain E4O06_12965 PF00891 O-methyltransferase domain E4O06_12970 PF08021 Siderophore-interacting FAD-binding domain E4O06_12970 PF00005 ABC transporter E4O06_12970 PF00664 ABC transporter transmembrane region E4O06_12970 PF04954 Siderophore-interacting protein E4O06_12990 PF00891 O-methyltransferase domain E4O06_13005 PF00664 ABC transporter transmembrane region E4O06_13005 PF00005 ABC transporter E4O06_13010 PF04954 Siderophore-interacting protein E4O06_13010 PF08021 Siderophore-interacting FAD-binding domain E4O06_13010 PF00664 ABC transporter transmembrane region E4O06_13010 PF00005 ABC transporter E4O06_13015 PF00440 Bacterial regulatory proteins, tetR family E4O06_13015 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O06_13020 PF00375 Sodium:dicarboxylate symporter family E4O06_13030 PF00392 Bacterial regulatory proteins, gntR family E4O06_13030 PF07729 FCD domain E4O06_13035 PF01266 FAD dependent oxidoreductase E4O06_13040 PF00664 ABC transporter transmembrane region E4O06_13040 PF00005 ABC transporter E4O06_13045 PF00005 ABC transporter E4O06_13050 PF04324 BFD-like [2Fe-2S] binding domain E4O06_13050 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_13060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O06_13060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O06_13125 PF01547 Bacterial extracellular solute-binding protein E4O06_13130 PF00528 Binding-protein-dependent transport system inner membrane component E4O06_13135 PF08402 TOBE domain E4O06_13135 PF00005 ABC transporter E4O06_13140 PF13635 Domain of unknown function (DUF4143) E4O06_13140 PF13173 AAA domain E4O06_13145 PF01546 Peptidase family M20/M25/M40 E4O06_13145 PF07687 Peptidase dimerisation domain E4O06_13150 PF07730 Histidine kinase E4O06_13155 PF00072 Response regulator receiver domain E4O06_13155 PF00196 Bacterial regulatory proteins, luxR family E4O06_13175 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_13175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O06_13180 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O06_13195 PF01081 KDPG and KHG aldolase E4O06_13200 PF01850 PIN domain E4O06_13220 PF00258 Flavodoxin E4O06_13230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O06_13230 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4O06_13230 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4O06_13230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O06_13235 PF08448 PAS fold E4O06_13235 PF00990 Diguanylate cyclase, GGDEF domain E4O06_13235 PF00563 EAL domain E4O06_13250 PF00990 Diguanylate cyclase, GGDEF domain E4O06_13250 PF00072 Response regulator receiver domain E4O06_13265 PF01207 Dihydrouridine synthase (Dus) E4O06_13295 PF03824 High-affinity nickel-transport protein E4O06_13310 PF04468 PSP1 C-terminal conserved region E4O06_13315 PF03885 Protein of unknown function (DUF327) E4O06_13325 PF04225 Opacity-associated protein A LysM-like domain E4O06_13325 PF01551 Peptidase family M23 E4O06_13330 PF01409 tRNA synthetases class II core domain (F) E4O06_13335 PF00128 Alpha amylase, catalytic domain E4O06_13345 PF12683 Protein of unknown function (DUF3798) E4O06_13350 PF00005 ABC transporter E4O06_13370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O06_13370 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O06_13375 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4O06_13375 PF00970 Oxidoreductase FAD-binding domain E4O06_13375 PF00175 Oxidoreductase NAD-binding domain E4O06_13385 PF01435 Peptidase family M48 E4O06_13385 PF07720 Tetratricopeptide repeat E4O06_13390 PF00672 HAMP domain E4O06_13390 PF02743 Cache domain E4O06_13390 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O06_13455 PF03412 Peptidase C39 family E4O06_13455 PF00005 ABC transporter E4O06_13455 PF00664 ABC transporter transmembrane region E4O06_13470 PF02915 Rubrerythrin E4O06_13475 PF00270 DEAD/DEAH box helicase E4O06_13475 PF16124 RecQ zinc-binding E4O06_13475 PF00271 Helicase conserved C-terminal domain E4O06_13475 PF09382 RQC domain E4O06_13475 PF00570 HRDC domain E4O06_13485 PF02565 Recombination protein O C terminal E4O06_13485 PF11967 Recombination protein O N terminal E4O06_13495 PF01702 Queuine tRNA-ribosyltransferase E4O06_13530 PF00005 ABC transporter E4O06_13560 PF03551 Transcriptional regulator PadR-like family E4O06_13570 PF07722 Peptidase C26 E4O06_13575 PF13520 Amino acid permease E4O06_13590 PF01791 DeoC/LacD family aldolase E4O06_13595 PF00210 Ferritin-like domain E4O06_13600 PF07687 Peptidase dimerisation domain E4O06_13600 PF01546 Peptidase family M20/M25/M40 E4O06_13620 PF01979 Amidohydrolase family E4O06_13630 PF01313 Bacterial export proteins, family 3 E4O06_13635 PF01311 Bacterial export proteins, family 1 E4O06_13640 PF01312 FlhB HrpN YscU SpaS Family E4O06_13645 PF00771 FHIPEP family E4O06_13650 PF00005 ABC transporter E4O06_13655 PF00005 ABC transporter E4O06_13660 PF01192 RNA polymerase Rpb6 E4O06_13675 PF00872 Transposase, Mutator family E4O06_13720 PF00365 Phosphofructokinase E4O06_13735 PF13545 Crp-like helix-turn-helix domain E4O06_13735 PF00027 Cyclic nucleotide-binding domain E4O06_13740 PF09028 Mac 1 E4O06_13750 PF01546 Peptidase family M20/M25/M40 E4O06_13750 PF07687 Peptidase dimerisation domain E4O06_13760 PF00140 Sigma-70 factor, region 1.2 E4O06_13760 PF04539 Sigma-70 region 3 E4O06_13760 PF03979 Sigma-70 factor, region 1.1 E4O06_13760 PF04542 Sigma-70 region 2 E4O06_13760 PF04545 Sigma-70, region 4 E4O06_13765 PF01136 Peptidase family U32 E4O06_13765 PF16325 Peptidase family U32 C-terminal domain E4O06_13785 PF01926 50S ribosome-binding GTPase E4O06_13785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4O06_13790 PF00391 PEP-utilising enzyme, mobile domain E4O06_13790 PF02896 PEP-utilising enzyme, TIM barrel domain E4O06_13790 PF05524 PEP-utilising enzyme, N-terminal E4O06_13815 PF00665 Integrase core domain E4O06_13815 PF13333 Integrase core domain E4O06_13815 PF13276 HTH-like domain E4O06_13925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4O06_13930 PF00005 ABC transporter E4O06_13945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_13945 PF00672 HAMP domain E4O06_13945 PF02743 Cache domain E4O06_13965 PF09820 Predicted AAA-ATPase E4O06_13965 PF08011 PD-(D/E)XK nuclease superfamily E4O06_13970 PF03063 Prismane/CO dehydrogenase family E4O06_13985 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O06_13990 PF02687 FtsX-like permease family E4O06_13990 PF00005 ABC transporter E4O06_13990 PF12704 MacB-like periplasmic core domain E4O06_14025 PF00004 ATPase family associated with various cellular activities (AAA) E4O06_14025 PF01434 Peptidase family M41 E4O06_14025 PF17862 AAA+ lid domain E4O06_14055 PF01048 Phosphorylase superfamily E4O06_14065 PF02743 Cache domain E4O06_14065 PF00672 HAMP domain E4O06_14065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_14080 PF01680 SOR/SNZ family E4O06_14085 PF10509 Galactokinase galactose-binding signature E4O06_14085 PF08544 GHMP kinases C terminal E4O06_14085 PF00288 GHMP kinases N terminal domain E4O06_14090 PF01171 PP-loop family E4O06_14115 PF12419 SNF2 Helicase protein E4O06_14115 PF00271 Helicase conserved C-terminal domain E4O06_14115 PF00176 SNF2 family N-terminal domain E4O06_14125 PF00403 Heavy-metal-associated domain E4O06_14135 PF00293 NUDIX domain E4O06_14140 PF00210 Ferritin-like domain E4O06_14145 PF00578 AhpC/TSA family E4O06_14145 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4O06_14150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4O06_14150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4O06_14165 PF16193 AAA C-terminal domain E4O06_14165 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O06_14165 PF12002 MgsA AAA+ ATPase C terminal E4O06_14170 PF05343 M42 glutamyl aminopeptidase E4O06_14180 PF01268 Formate--tetrahydrofolate ligase E4O06_14185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O06_14185 PF03129 Anticodon binding domain E4O06_14205 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4O06_14205 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O06_14230 PF00005 ABC transporter E4O06_14235 PF00005 ABC transporter E4O06_14245 PF00072 Response regulator receiver domain E4O06_14245 PF04397 LytTr DNA-binding domain E4O06_14260 PF01230 HIT domain E4O06_14280 PF00109 Beta-ketoacyl synthase, N-terminal domain E4O06_14280 PF02801 Beta-ketoacyl synthase, C-terminal domain E4O06_14290 PF00501 AMP-binding enzyme E4O06_14290 PF13193 AMP-binding enzyme C-terminal domain E4O06_14295 PF03099 Biotin/lipoate A/B protein ligase family E4O06_14295 PF02237 Biotin protein ligase C terminal domain E4O06_14295 PF08279 HTH domain E4O06_14300 PF01515 Phosphate acetyl/butaryl transferase E4O06_14305 PF13174 Tetratricopeptide repeat E4O06_14305 PF13176 Tetratricopeptide repeat E4O06_14310 PF03960 ArsC family E4O06_14315 PF00005 ABC transporter E4O06_14315 PF12848 ABC transporter E4O06_14325 PF00672 HAMP domain E4O06_14325 PF02743 Cache domain E4O06_14325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O06_14335 PF00005 ABC transporter E4O06_14350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O06_14350 PF00204 DNA gyrase B E4O06_14350 PF00986 DNA gyrase B subunit, carboxyl terminus E4O06_14350 PF01751 Toprim domain