locus-tag class description E4O01_00005 PF00308 Bacterial dnaA protein E4O01_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4O01_00005 PF11638 DnaA N-terminal domain E4O01_00025 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4O01_00025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4O01_00025 PF14579 Helix-hairpin-helix motif E4O01_00025 PF02811 PHP domain E4O01_00035 PF17239 Family of unknown function (DUF5312) E4O01_00050 PF00664 ABC transporter transmembrane region E4O01_00050 PF00005 ABC transporter E4O01_00065 PF00664 ABC transporter transmembrane region E4O01_00065 PF00005 ABC transporter E4O01_00085 PF00561 alpha/beta hydrolase fold E4O01_00120 PF07687 Peptidase dimerisation domain E4O01_00120 PF01546 Peptidase family M20/M25/M40 E4O01_00125 PF00072 Response regulator receiver domain E4O01_00125 PF00486 Transcriptional regulatory protein, C terminal E4O01_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_00135 PF00005 ABC transporter E4O01_00180 PF08279 HTH domain E4O01_00180 PF13280 WYL domain E4O01_00195 PF00691 OmpA family E4O01_00200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O01_00200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O01_00200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O01_00200 PF10371 Domain of unknown function E4O01_00200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O01_00235 PF00155 Aminotransferase class I and II E4O01_00240 PF00448 SRP54-type protein, GTPase domain E4O01_00245 PF10609 NUBPL iron-transfer P-loop NTPase E4O01_00255 PF04545 Sigma-70, region 4 E4O01_00255 PF04539 Sigma-70 region 3 E4O01_00255 PF04542 Sigma-70 region 2 E4O01_00285 PF14821 Threonine synthase N terminus E4O01_00285 PF00291 Pyridoxal-phosphate dependent enzyme E4O01_00315 PF00953 Glycosyl transferase family 4 E4O01_00320 PF01066 CDP-alcohol phosphatidyltransferase E4O01_00325 PF00464 Serine hydroxymethyltransferase E4O01_00340 PF00571 CBS domain E4O01_00340 PF00478 IMP dehydrogenase / GMP reductase domain E4O01_00345 PF08264 Anticodon-binding domain of tRNA E4O01_00345 PF00133 tRNA synthetases class I (I, L, M and V) E4O01_00365 PF11849 Domain of unknown function (DUF3369) E4O01_00370 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O01_00375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O01_00380 PF06180 Cobalt chelatase (CbiK) E4O01_00395 PF07702 UTRA domain E4O01_00395 PF00392 Bacterial regulatory proteins, gntR family E4O01_00400 PF00005 ABC transporter E4O01_00425 PF00664 ABC transporter transmembrane region E4O01_00425 PF00005 ABC transporter E4O01_00430 PF00571 CBS domain E4O01_00430 PF00005 ABC transporter E4O01_00440 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_00440 PF04324 BFD-like [2Fe-2S] binding domain E4O01_00445 PF01266 FAD dependent oxidoreductase E4O01_00455 PF12728 Helix-turn-helix domain E4O01_00455 PF02661 Fic/DOC family E4O01_00465 PF08439 Oligopeptidase F E4O01_00465 PF01432 Peptidase family M3 E4O01_00485 PF01625 Peptide methionine sulfoxide reductase E4O01_00485 PF01641 SelR domain E4O01_00505 PF02719 Polysaccharide biosynthesis protein E4O01_00530 PF00595 PDZ domain E4O01_00540 PF03412 Peptidase C39 family E4O01_00540 PF00005 ABC transporter E4O01_00540 PF00664 ABC transporter transmembrane region E4O01_00545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4O01_00570 PF03572 Peptidase family S41 E4O01_00570 PF01471 Putative peptidoglycan binding domain E4O01_00570 PF17820 PDZ domain E4O01_00580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O01_00590 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O01_00590 PF01799 [2Fe-2S] binding domain E4O01_00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_00630 PF00085 Thioredoxin E4O01_00640 PF00005 ABC transporter E4O01_00645 PF01032 FecCD transport family E4O01_00655 PF02514 CobN/Magnesium Chelatase E4O01_00660 PF17863 AAA lid domain E4O01_00660 PF01078 Magnesium chelatase, subunit ChlI E4O01_00660 PF13519 von Willebrand factor type A domain E4O01_00665 PF17863 AAA lid domain E4O01_00665 PF01078 Magnesium chelatase, subunit ChlI E4O01_00670 PF02384 N-6 DNA Methylase E4O01_00690 PF01420 Type I restriction modification DNA specificity domain E4O01_00695 PF02899 Phage integrase, N-terminal SAM-like domain E4O01_00695 PF00589 Phage integrase family E4O01_00710 PF01420 Type I restriction modification DNA specificity domain E4O01_00720 PF18766 SWI2/SNF2 ATPase E4O01_00720 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4O01_00720 PF11867 Domain of unknown function (DUF3387) E4O01_00725 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4O01_00730 PF03553 Na+/H+ antiporter family E4O01_00735 PF00005 ABC transporter E4O01_00740 PF01032 FecCD transport family E4O01_00760 PF00082 Subtilase family E4O01_00760 PF05922 Peptidase inhibitor I9 E4O01_00765 PF03144 Elongation factor Tu domain 2 E4O01_00765 PF00009 Elongation factor Tu GTP binding domain E4O01_00765 PF03143 Elongation factor Tu C-terminal domain E4O01_00770 PF00338 Ribosomal protein S10p/S20e E4O01_00775 PF00297 Ribosomal protein L3 E4O01_00780 PF00573 Ribosomal protein L4/L1 family E4O01_00785 PF00276 Ribosomal protein L23 E4O01_00790 PF03947 Ribosomal Proteins L2, C-terminal domain E4O01_00790 PF00181 Ribosomal Proteins L2, RNA binding domain E4O01_00795 PF00203 Ribosomal protein S19 E4O01_00800 PF00237 Ribosomal protein L22p/L17e E4O01_00805 PF00189 Ribosomal protein S3, C-terminal domain E4O01_00805 PF07650 KH domain E4O01_00810 PF00252 Ribosomal protein L16p/L10e E4O01_00815 PF00831 Ribosomal L29 protein E4O01_00820 PF00366 Ribosomal protein S17 E4O01_00825 PF00238 Ribosomal protein L14p/L23e E4O01_00830 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4O01_00830 PF00467 KOW motif E4O01_00835 PF00673 ribosomal L5P family C-terminus E4O01_00835 PF00281 Ribosomal protein L5 E4O01_00840 PF00253 Ribosomal protein S14p/S29e E4O01_00845 PF00410 Ribosomal protein S8 E4O01_00850 PF00347 Ribosomal protein L6 E4O01_00855 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4O01_00860 PF00333 Ribosomal protein S5, N-terminal domain E4O01_00860 PF03719 Ribosomal protein S5, C-terminal domain E4O01_00865 PF00327 Ribosomal protein L30p/L7e E4O01_00870 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4O01_00875 PF00344 SecY translocase E4O01_00880 PF00444 Ribosomal protein L36 E4O01_00885 PF00416 Ribosomal protein S13/S18 E4O01_00890 PF00411 Ribosomal protein S11 E4O01_00895 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4O01_00895 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4O01_00895 PF01000 RNA polymerase Rpb3/RpoA insert domain E4O01_00900 PF01196 Ribosomal protein L17 E4O01_00920 PF00708 Acylphosphatase E4O01_00940 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O01_00960 PF13649 Methyltransferase domain E4O01_00965 PF02082 Transcriptional regulator E4O01_00970 PF13460 NAD(P)H-binding E4O01_00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_00990 PF00672 HAMP domain E4O01_01010 PF03852 DNA mismatch endonuclease Vsr E4O01_01015 PF00145 C-5 cytosine-specific DNA methylase E4O01_01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_01025 PF00072 Response regulator receiver domain E4O01_01085 PF00005 ABC transporter E4O01_01100 PF01022 Bacterial regulatory protein, arsR family E4O01_01105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_01105 PF00672 HAMP domain E4O01_01105 PF02743 Cache domain E4O01_01115 PF11855 Protein of unknown function (DUF3375) E4O01_01135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_01135 PF17202 Single cache domain 3 E4O01_01135 PF00672 HAMP domain E4O01_01150 PF02311 AraC-like ligand binding domain E4O01_01150 PF12833 Helix-turn-helix domain E4O01_01155 PF00664 ABC transporter transmembrane region E4O01_01155 PF00005 ABC transporter E4O01_01155 PF03412 Peptidase C39 family E4O01_01160 PF00664 ABC transporter transmembrane region E4O01_01160 PF00005 ABC transporter E4O01_01170 PF02678 Pirin E4O01_01170 PF05726 Pirin C-terminal cupin domain E4O01_01190 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_01200 PF01613 Flavin reductase like domain E4O01_01205 PF01638 HxlR-like helix-turn-helix E4O01_01215 PF00664 ABC transporter transmembrane region E4O01_01215 PF00005 ABC transporter E4O01_01220 PF00664 ABC transporter transmembrane region E4O01_01220 PF00005 ABC transporter E4O01_01225 PF00005 ABC transporter E4O01_01240 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O01_01240 PF00440 Bacterial regulatory proteins, tetR family E4O01_01245 PF07977 FabA-like domain E4O01_01250 PF01225 Mur ligase family, catalytic domain E4O01_01250 PF02875 Mur ligase family, glutamate ligase domain E4O01_01250 PF08245 Mur ligase middle domain E4O01_01255 PF01430 Hsp33 protein E4O01_01260 PF02570 Precorrin-8X methylmutase E4O01_01270 PF00005 ABC transporter E4O01_01270 PF00664 ABC transporter transmembrane region E4O01_01275 PF00005 ABC transporter E4O01_01275 PF00664 ABC transporter transmembrane region E4O01_01285 PF00005 ABC transporter E4O01_01290 PF00950 ABC 3 transport family E4O01_01320 PF02568 Thiamine biosynthesis protein (ThiI) E4O01_01320 PF02926 THUMP domain E4O01_01325 PF00793 DAHP synthetase I family E4O01_01330 PF02229 Transcriptional Coactivator p15 (PC4) E4O01_01335 PF01066 CDP-alcohol phosphatidyltransferase E4O01_01340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O01_01340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O01_01355 PF02508 Rnf-Nqr subunit, membrane protein E4O01_01360 PF02508 Rnf-Nqr subunit, membrane protein E4O01_01365 PF04205 FMN-binding domain E4O01_01370 PF03116 NQR2, RnfD, RnfE family E4O01_01375 PF10531 SLBB domain E4O01_01375 PF13237 4Fe-4S dicluster domain E4O01_01375 PF13375 RnfC Barrel sandwich hybrid domain E4O01_01375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O01_01385 PF13519 von Willebrand factor type A domain E4O01_01405 PF16314 Domain of unknown function (DUF4954) E4O01_01420 PF00672 HAMP domain E4O01_01420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_01420 PF02743 Cache domain E4O01_01435 PF00572 Ribosomal protein L13 E4O01_01440 PF00380 Ribosomal protein S9/S16 E4O01_01445 PF02631 RecX family E4O01_01450 PF00072 Response regulator receiver domain E4O01_01450 PF00486 Transcriptional regulatory protein, C terminal E4O01_01475 PF00849 RNA pseudouridylate synthase E4O01_01475 PF01479 S4 domain E4O01_01480 PF00579 tRNA synthetases class I (W and Y) E4O01_01490 PF01921 tRNA synthetases class I (K) E4O01_01495 PF00664 ABC transporter transmembrane region E4O01_01495 PF00005 ABC transporter E4O01_01500 PF00664 ABC transporter transmembrane region E4O01_01500 PF00005 ABC transporter E4O01_01520 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O01_01525 PF01134 Glucose inhibited division protein A E4O01_01525 PF13932 GidA associated domain E4O01_01550 PF01973 Protein of unknown function DUF115 E4O01_01560 PF00005 ABC transporter E4O01_01565 PF00005 ABC transporter E4O01_01565 PF00664 ABC transporter transmembrane region E4O01_01585 PF08011 PD-(D/E)XK nuclease superfamily E4O01_01585 PF09820 Predicted AAA-ATPase E4O01_01590 PF06745 KaiC E4O01_01590 PF18073 Rubredoxin metal binding domain E4O01_01600 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4O01_01605 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_01615 PF02527 rRNA small subunit methyltransferase G E4O01_01620 PF00171 Aldehyde dehydrogenase family E4O01_01640 PF00814 Glycoprotease family E4O01_01650 PF00672 HAMP domain E4O01_01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_01650 PF00512 His Kinase A (phospho-acceptor) domain E4O01_01650 PF01627 Hpt domain E4O01_01650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4O01_01650 PF00072 Response regulator receiver domain E4O01_01655 PF00072 Response regulator receiver domain E4O01_01655 PF00486 Transcriptional regulatory protein, C terminal E4O01_01665 PF08241 Methyltransferase domain E4O01_01685 PF03167 Uracil DNA glycosylase superfamily E4O01_01690 PF00270 DEAD/DEAH box helicase E4O01_01690 PF00271 Helicase conserved C-terminal domain E4O01_01690 PF17764 3′ DNA-binding domain (3′BD) E4O01_01690 PF18074 Primosomal protein N C-terminal domain E4O01_01690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4O01_01710 PF09820 Predicted AAA-ATPase E4O01_01710 PF08011 PD-(D/E)XK nuclease superfamily E4O01_01715 PF03462 PCRF domain E4O01_01715 PF00472 RF-1 domain E4O01_01720 PF05175 Methyltransferase small domain E4O01_01720 PF17827 PrmC N-terminal domain E4O01_01720 PF02390 Putative methyltransferase E4O01_01730 PF09820 Predicted AAA-ATPase E4O01_01730 PF08011 PD-(D/E)XK nuclease superfamily E4O01_01745 PF13537 Glutamine amidotransferase domain E4O01_01745 PF00156 Phosphoribosyl transferase domain E4O01_01775 PF04552 Sigma-54, DNA binding domain E4O01_01775 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4O01_01775 PF04963 Sigma-54 factor, core binding domain E4O01_01780 PF00753 Metallo-beta-lactamase superfamily E4O01_01790 PF01370 NAD dependent epimerase/dehydratase family E4O01_01795 PF00468 Ribosomal protein L34 E4O01_01800 PF00825 Ribonuclease P E4O01_01805 PF01809 Putative membrane protein insertion efficiency factor E4O01_01810 PF14849 YidC periplasmic domain E4O01_01810 PF02096 60Kd inner membrane protein E4O01_01815 PF14804 Jag N-terminus E4O01_01815 PF01424 R3H domain E4O01_01825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4O01_01835 PF03186 CobD/Cbib protein E4O01_01840 PF00574 Clp protease E4O01_01845 PF02446 4-alpha-glucanotransferase E4O01_01850 PF07478 D-ala D-ala ligase C-terminus E4O01_01850 PF01820 D-ala D-ala ligase N-terminus E4O01_01860 PF02654 Cobalamin-5-phosphate synthase E4O01_01870 PF07730 Histidine kinase E4O01_01885 PF00005 ABC transporter E4O01_01900 PF05175 Methyltransferase small domain E4O01_01905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O01_01910 PF08534 Redoxin E4O01_01915 PF12801 4Fe-4S binding domain E4O01_01915 PF04205 FMN-binding domain E4O01_01925 PF00578 AhpC/TSA family E4O01_01935 PF03553 Na+/H+ antiporter family E4O01_01940 PF07969 Amidohydrolase family E4O01_01955 PF02733 Dak1 domain E4O01_01960 PF02733 Dak1 domain E4O01_01960 PF02734 DAK2 domain E4O01_01970 PF07969 Amidohydrolase family E4O01_01980 PF01032 FecCD transport family E4O01_01995 PF02599 Global regulator protein family E4O01_02000 PF02623 FliW protein E4O01_02005 PF07196 Flagellin hook IN motif E4O01_02005 PF00700 Bacterial flagellin C-terminal helical region E4O01_02005 PF00669 Bacterial flagellin N-terminal helical region E4O01_02010 PF07196 Flagellin hook IN motif E4O01_02010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O01_02030 PF02545 Maf-like protein E4O01_02035 PF00318 Ribosomal protein S2 E4O01_02040 PF00889 Elongation factor TS E4O01_02045 PF01765 Ribosome recycling factor E4O01_02050 PF01255 Putative undecaprenyl diphosphate synthase E4O01_02060 PF13288 DXP reductoisomerase C-terminal domain E4O01_02060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4O01_02060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4O01_02065 PF02163 Peptidase family M50 E4O01_02065 PF17820 PDZ domain E4O01_02075 PF13603 Leucyl-tRNA synthetase, Domain 2 E4O01_02075 PF08264 Anticodon-binding domain of tRNA E4O01_02075 PF09334 tRNA synthetases class I (M) E4O01_02075 PF00133 tRNA synthetases class I (I, L, M and V) E4O01_02080 PF02743 Cache domain E4O01_02080 PF00672 HAMP domain E4O01_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_02090 PF17755 UvrA DNA-binding domain E4O01_02090 PF17760 UvrA interaction domain E4O01_02090 PF00005 ABC transporter E4O01_02100 PF17674 HHH domain E4O01_02100 PF00575 S1 RNA binding domain E4O01_02100 PF09371 Tex-like protein N-terminal domain E4O01_02100 PF16921 Tex protein YqgF-like domain E4O01_02105 PF01814 Hemerythrin HHE cation binding domain E4O01_02115 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O01_02115 PF13654 AAA domain E4O01_02120 PF13742 OB-fold nucleic acid binding domain E4O01_02120 PF02601 Exonuclease VII, large subunit E4O01_02130 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E4O01_02130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4O01_02140 PF16811 TRAP transporter T-component E4O01_02150 PF02310 B12 binding domain E4O01_02155 PF13941 MutL protein E4O01_02160 PF01783 Ribosomal L32p protein family E4O01_02165 PF00550 Phosphopantetheine attachment site E4O01_02170 PF14622 Ribonuclease-III-like E4O01_02170 PF00035 Double-stranded RNA binding motif E4O01_02175 PF00011 Hsp20/alpha crystallin family E4O01_02185 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O01_02185 PF13735 tRNA nucleotidyltransferase domain 2 putative E4O01_02185 PF01743 Poly A polymerase head domain E4O01_02190 PF01544 CorA-like Mg2+ transporter protein E4O01_02195 PF02719 Polysaccharide biosynthesis protein E4O01_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_02205 PF06574 FAD synthetase E4O01_02205 PF01687 Riboflavin kinase E4O01_02210 PF00312 Ribosomal protein S15 E4O01_02215 PF00013 KH domain E4O01_02215 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4O01_02215 PF01138 3' exoribonuclease family, domain 1 E4O01_02215 PF03725 3' exoribonuclease family, domain 2 E4O01_02215 PF00575 S1 RNA binding domain E4O01_02220 PF00692 dUTPase E4O01_02235 PF06368 Methylaspartate mutase E chain (MutE) E4O01_02240 PF07476 Methylaspartate ammonia-lyase C-terminus E4O01_02240 PF05034 Methylaspartate ammonia-lyase N-terminus E4O01_02245 PF01497 Periplasmic binding protein E4O01_02250 PF01032 FecCD transport family E4O01_02255 PF00005 ABC transporter E4O01_02260 PF07687 Peptidase dimerisation domain E4O01_02260 PF01546 Peptidase family M20/M25/M40 E4O01_02270 PF01297 Zinc-uptake complex component A periplasmic E4O01_02290 PF03129 Anticodon binding domain E4O01_02290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O01_02290 PF04073 Aminoacyl-tRNA editing domain E4O01_02300 PF10502 Signal peptidase, peptidase S26 E4O01_02310 PF13407 Periplasmic binding protein domain E4O01_02310 PF18610 Periplasmic binding protein domain E4O01_02315 PF00005 ABC transporter E4O01_02320 PF02653 Branched-chain amino acid transport system / permease component E4O01_02325 PF13847 Methyltransferase domain E4O01_02340 PF08544 GHMP kinases C terminal E4O01_02340 PF00288 GHMP kinases N terminal domain E4O01_02340 PF10509 Galactokinase galactose-binding signature E4O01_02350 PF01784 NIF3 (NGG1p interacting factor 3) E4O01_02365 PF13726 Na+-H+ antiporter family E4O01_02365 PF03553 Na+/H+ antiporter family E4O01_02370 PF03553 Na+/H+ antiporter family E4O01_02375 PF00892 EamA-like transporter family E4O01_02385 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O01_02390 PF01177 Asp/Glu/Hydantoin racemase E4O01_02395 PF10371 Domain of unknown function E4O01_02395 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O01_02395 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O01_02395 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O01_02395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O01_02400 PF01479 S4 domain E4O01_02400 PF00849 RNA pseudouridylate synthase E4O01_02405 PF00155 Aminotransferase class I and II E4O01_02415 PF00291 Pyridoxal-phosphate dependent enzyme E4O01_02415 PF14821 Threonine synthase N terminus E4O01_02420 PF02885 Glycosyl transferase family, helical bundle domain E4O01_02420 PF00591 Glycosyl transferase family, a/b domain E4O01_02420 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4O01_02425 PF01368 DHH family E4O01_02425 PF02272 DHHA1 domain E4O01_02425 PF17768 RecJ OB domain E4O01_02425 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4O01_02430 PF01476 LysM domain E4O01_02430 PF08525 Opacity-associated protein A N-terminal motif E4O01_02430 PF01551 Peptidase family M23 E4O01_02440 PF17762 HTH domain found in ParB protein E4O01_02440 PF02195 ParB-like nuclease domain E4O01_02445 PF00501 AMP-binding enzyme E4O01_02460 PF14353 CpXC protein E4O01_02470 PF01569 PAP2 superfamily E4O01_02475 PF01926 50S ribosome-binding GTPase E4O01_02475 PF12631 MnmE helical domain E4O01_02475 PF10396 GTP-binding protein TrmE N-terminus E4O01_02480 PF08011 PD-(D/E)XK nuclease superfamily E4O01_02480 PF09820 Predicted AAA-ATPase E4O01_02485 PF00654 Voltage gated chloride channel E4O01_02515 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_02515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O01_02515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4O01_02525 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O01_02535 PF04298 Putative neutral zinc metallopeptidase E4O01_02540 PF02743 Cache domain E4O01_02540 PF00672 HAMP domain E4O01_02540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_02545 PF01189 16S rRNA methyltransferase RsmB/F E4O01_02545 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4O01_02545 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4O01_02550 PF13302 Acetyltransferase (GNAT) domain E4O01_02555 PF09820 Predicted AAA-ATPase E4O01_02555 PF08011 PD-(D/E)XK nuclease superfamily E4O01_02565 PF00005 ABC transporter E4O01_02600 PF00707 Translation initiation factor IF-3, C-terminal domain E4O01_02600 PF05198 Translation initiation factor IF-3, N-terminal domain E4O01_02605 PF01632 Ribosomal protein L35 E4O01_02610 PF00453 Ribosomal protein L20 E4O01_02620 PF05164 Cell division protein ZapA E4O01_02625 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4O01_02635 PF01476 LysM domain E4O01_02635 PF01464 Transglycosylase SLT domain E4O01_02655 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_02660 PF03313 Serine dehydratase alpha chain E4O01_02665 PF00912 Transglycosylase E4O01_02665 PF06832 Penicillin-Binding Protein C-terminus Family E4O01_02665 PF00905 Penicillin binding protein transpeptidase domain E4O01_02670 PF00326 Prolyl oligopeptidase family E4O01_02670 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O01_02695 PF05525 Branched-chain amino acid transport protein E4O01_02710 PF04055 Radical SAM superfamily E4O01_02710 PF00919 Uncharacterized protein family UPF0004 E4O01_02735 PF00232 Glycosyl hydrolase family 1 E4O01_02750 PF00005 ABC transporter E4O01_02750 PF12848 ABC transporter E4O01_02760 PF13180 PDZ domain E4O01_02760 PF01471 Putative peptidoglycan binding domain E4O01_02760 PF03572 Peptidase family S41 E4O01_02765 PF04452 RNA methyltransferase E4O01_02780 PF02517 CPBP intramembrane metalloprotease E4O01_02785 PF02517 CPBP intramembrane metalloprotease E4O01_02825 PF00005 ABC transporter E4O01_02825 PF00664 ABC transporter transmembrane region E4O01_02825 PF03412 Peptidase C39 family E4O01_02830 PF00675 Insulinase (Peptidase family M16) E4O01_02830 PF05193 Peptidase M16 inactive domain E4O01_02830 PF08367 Peptidase M16C associated E4O01_02835 PF02075 Crossover junction endodeoxyribonuclease RuvC E4O01_02840 PF01330 RuvA N terminal domain E4O01_02870 PF13726 Na+-H+ antiporter family E4O01_02870 PF03553 Na+/H+ antiporter family E4O01_02890 PF00005 ABC transporter E4O01_02925 PF00005 ABC transporter E4O01_02930 PF01891 Cobalt uptake substrate-specific transmembrane region E4O01_02955 PF01609 Transposase DDE domain E4O01_02955 PF05598 Transposase domain (DUF772) E4O01_02970 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4O01_02975 PF10431 C-terminal, D2-small domain, of ClpB protein E4O01_02975 PF00004 ATPase family associated with various cellular activities (AAA) E4O01_02975 PF07724 AAA domain (Cdc48 subfamily) E4O01_02975 PF17871 AAA lid domain E4O01_02975 PF02861 Clp amino terminal domain, pathogenicity island component E4O01_02980 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4O01_02990 PF02677 Epoxyqueuosine reductase QueH E4O01_02995 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4O01_03015 PF00005 ABC transporter E4O01_03015 PF00664 ABC transporter transmembrane region E4O01_03020 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O01_03025 PF03687 Uncharacterised protein family (UPF0164) E4O01_03035 PF07228 Stage II sporulation protein E (SpoIIE) E4O01_03035 PF00672 HAMP domain E4O01_03040 PF13732 Domain of unknown function (DUF4162) E4O01_03040 PF00005 ABC transporter E4O01_03060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4O01_03080 PF00270 DEAD/DEAH box helicase E4O01_03080 PF00271 Helicase conserved C-terminal domain E4O01_03090 PF01979 Amidohydrolase family E4O01_03135 PF07075 Protein of unknown function (DUF1343) E4O01_03140 PF00144 Beta-lactamase E4O01_03150 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O01_03155 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O01_03160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4O01_03160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4O01_03165 PF00448 SRP54-type protein, GTPase domain E4O01_03165 PF02881 SRP54-type protein, helical bundle domain E4O01_03165 PF02978 Signal peptide binding domain E4O01_03170 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4O01_03175 PF01176 Translation initiation factor 1A / IF-1 E4O01_03180 PF00226 DnaJ domain E4O01_03180 PF01556 DnaJ C terminal domain E4O01_03180 PF00684 DnaJ central domain E4O01_03185 PF00696 Amino acid kinase family E4O01_03190 PF00588 SpoU rRNA Methylase family E4O01_03205 PF00575 S1 RNA binding domain E4O01_03210 PF02954 Bacterial regulatory protein, Fis family E4O01_03210 PF00072 Response regulator receiver domain E4O01_03210 PF00158 Sigma-54 interaction domain E4O01_03230 PF00563 EAL domain E4O01_03230 PF00990 Diguanylate cyclase, GGDEF domain E4O01_03230 PF03707 Bacterial signalling protein N terminal repeat E4O01_03235 PF04055 Radical SAM superfamily E4O01_03260 PF01042 Endoribonuclease L-PSP E4O01_03265 PF08676 MutL C terminal dimerisation domain E4O01_03265 PF01119 DNA mismatch repair protein, C-terminal domain E4O01_03270 PF02609 Exonuclease VII small subunit E4O01_03275 PF00005 ABC transporter E4O01_03280 PF00005 ABC transporter E4O01_03290 PF04023 FeoA domain E4O01_03295 PF07664 Ferrous iron transport protein B C terminus E4O01_03295 PF17910 FeoB cytosolic helical domain E4O01_03295 PF02421 Ferrous iron transport protein B E4O01_03295 PF07670 Nucleoside recognition E4O01_03295 PF04023 FeoA domain E4O01_03340 PF00266 Aminotransferase class-V E4O01_03370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O01_03385 PF03462 PCRF domain E4O01_03385 PF00472 RF-1 domain E4O01_03400 PF00448 SRP54-type protein, GTPase domain E4O01_03400 PF02881 SRP54-type protein, helical bundle domain E4O01_03410 PF02687 FtsX-like permease family E4O01_03410 PF12704 MacB-like periplasmic core domain E4O01_03415 PF00005 ABC transporter E4O01_03425 PF02151 UvrB/uvrC motif E4O01_03430 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4O01_03435 PF00004 ATPase family associated with various cellular activities (AAA) E4O01_03435 PF07724 AAA domain (Cdc48 subfamily) E4O01_03435 PF17871 AAA lid domain E4O01_03435 PF02861 Clp amino terminal domain, pathogenicity island component E4O01_03435 PF10431 C-terminal, D2-small domain, of ClpB protein E4O01_03440 PF00483 Nucleotidyl transferase E4O01_03445 PF00534 Glycosyl transferases group 1 E4O01_03445 PF13439 Glycosyltransferase Family 4 E4O01_03455 PF03330 Lytic transglycolase E4O01_03465 PF01026 TatD related DNase E4O01_03470 PF00691 OmpA family E4O01_03505 PF05785 Rho-activating domain of cytotoxic necrotizing factor E4O01_03505 PF18807 Tripartite Tc toxins repeat E4O01_03585 PF07687 Peptidase dimerisation domain E4O01_03585 PF01546 Peptidase family M20/M25/M40 E4O01_03595 PF03606 C4-dicarboxylate anaerobic carrier E4O01_03620 PF00440 Bacterial regulatory proteins, tetR family E4O01_03630 PF08439 Oligopeptidase F E4O01_03630 PF01432 Peptidase family M3 E4O01_03635 PF00929 Exonuclease E4O01_03640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O01_03640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O01_03640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O01_03640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O01_03645 PF01078 Magnesium chelatase, subunit ChlI E4O01_03645 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4O01_03650 PF10415 Fumarase C C-terminus E4O01_03650 PF00206 Lyase E4O01_03655 PF00691 OmpA family E4O01_03655 PF13488 Glycine zipper E4O01_03660 PF05872 Bacterial protein of unknown function (DUF853) E4O01_03670 PF03717 Penicillin-binding Protein dimerisation domain E4O01_03670 PF00905 Penicillin binding protein transpeptidase domain E4O01_03680 PF02517 CPBP intramembrane metalloprotease E4O01_03700 PF09186 Domain of unknown function (DUF1949) E4O01_03700 PF01205 Uncharacterized protein family UPF0029 E4O01_03725 PF03477 ATP cone domain E4O01_03735 PF01145 SPFH domain / Band 7 family E4O01_03740 PF01145 SPFH domain / Band 7 family E4O01_03750 PF03062 MBOAT, membrane-bound O-acyltransferase family E4O01_03760 PF00288 GHMP kinases N terminal domain E4O01_03760 PF08544 GHMP kinases C terminal E4O01_03765 PF04026 SpoVG E4O01_03775 PF14693 Ribosomal protein TL5, C-terminal domain E4O01_03775 PF01386 Ribosomal L25p family E4O01_03780 PF01171 PP-loop family E4O01_03790 PF13180 PDZ domain E4O01_03790 PF17820 PDZ domain E4O01_03805 PF08275 DNA primase catalytic core, N-terminal domain E4O01_03805 PF01807 CHC2 zinc finger E4O01_03810 PF04545 Sigma-70, region 4 E4O01_03810 PF04542 Sigma-70 region 2 E4O01_03810 PF04539 Sigma-70 region 3 E4O01_03810 PF03979 Sigma-70 factor, region 1.1 E4O01_03810 PF00140 Sigma-70 factor, region 1.2 E4O01_03845 PF03717 Penicillin-binding Protein dimerisation domain E4O01_03845 PF00905 Penicillin binding protein transpeptidase domain E4O01_03850 PF01098 Cell cycle protein E4O01_03875 PF01263 Aldose 1-epimerase E4O01_03885 PF00860 Permease family E4O01_03890 PF13495 Phage integrase, N-terminal SAM-like domain E4O01_03890 PF00589 Phage integrase family E4O01_03910 PF01177 Asp/Glu/Hydantoin racemase E4O01_03965 PF14338 Mrr N-terminal domain E4O01_03965 PF04471 Restriction endonuclease E4O01_04005 PF01850 PIN domain E4O01_04105 PF01554 MatE E4O01_04160 PF00145 C-5 cytosine-specific DNA methylase E4O01_04320 PF01555 DNA methylase E4O01_04330 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4O01_04335 PF01850 PIN domain E4O01_04400 PF01609 Transposase DDE domain E4O01_04400 PF05598 Transposase domain (DUF772) E4O01_04420 PF01609 Transposase DDE domain E4O01_04420 PF05598 Transposase domain (DUF772) E4O01_04435 PF01209 ubiE/COQ5 methyltransferase family E4O01_04450 PF00300 Histidine phosphatase superfamily (branch 1) E4O01_04460 PF01609 Transposase DDE domain E4O01_04460 PF05598 Transposase domain (DUF772) E4O01_04470 PF01966 HD domain E4O01_04500 PF01880 Desulfoferrodoxin E4O01_04500 PF06397 Desulfoferrodoxin, N-terminal domain E4O01_04505 PF16363 GDP-mannose 4,6 dehydratase E4O01_04515 PF04294 VanW like protein E4O01_04520 PF00829 Ribosomal prokaryotic L21 protein E4O01_04530 PF01016 Ribosomal L27 protein E4O01_04535 PF01018 GTP1/OBG E4O01_04535 PF01926 50S ribosome-binding GTPase E4O01_04540 PF01467 Cytidylyltransferase-like E4O01_04555 PF02417 Chromate transporter E4O01_04560 PF02417 Chromate transporter E4O01_04580 PF00501 AMP-binding enzyme E4O01_04590 PF17092 Penicillin-binding protein OB-like domain E4O01_04590 PF00912 Transglycosylase E4O01_04590 PF00905 Penicillin binding protein transpeptidase domain E4O01_04600 PF04225 Opacity-associated protein A LysM-like domain E4O01_04600 PF01551 Peptidase family M23 E4O01_04610 PF00037 4Fe-4S binding domain E4O01_04620 PF03372 Endonuclease/Exonuclease/phosphatase family E4O01_04625 PF00557 Metallopeptidase family M24 E4O01_04630 PF00226 DnaJ domain E4O01_04630 PF01556 DnaJ C terminal domain E4O01_04630 PF00684 DnaJ central domain E4O01_04650 PF01593 Flavin containing amine oxidoreductase E4O01_04655 PF00175 Oxidoreductase NAD-binding domain E4O01_04655 PF00042 Globin E4O01_04655 PF00970 Oxidoreductase FAD-binding domain E4O01_04670 PF01743 Poly A polymerase head domain E4O01_04670 PF12626 Polymerase A arginine-rich C-terminus E4O01_04670 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O01_04680 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O01_04680 PF17191 RecG wedge domain E4O01_04680 PF00270 DEAD/DEAH box helicase E4O01_04685 PF01171 PP-loop family E4O01_04685 PF00117 Glutamine amidotransferase class-I E4O01_04685 PF00958 GMP synthase C terminal domain E4O01_04695 PF00162 Phosphoglycerate kinase E4O01_04710 PF04620 Flagellar filament outer layer protein Flaa E4O01_04720 PF01649 Ribosomal protein S20 E4O01_04740 PF00994 Probable molybdopterin binding domain E4O01_04740 PF18146 Damage-inducible protein CinA KH domain E4O01_04740 PF02464 Competence-damaged protein E4O01_04860 PF01649 Ribosomal protein S20 E4O01_04870 PF00795 Carbon-nitrogen hydrolase E4O01_04945 PF00300 Histidine phosphatase superfamily (branch 1) E4O01_04950 PF07171 MlrC C-terminus E4O01_04950 PF07364 Metallopeptidase family M81 E4O01_04965 PF00005 ABC transporter E4O01_04980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O01_04985 PF00563 EAL domain E4O01_04985 PF01590 GAF domain E4O01_04985 PF00990 Diguanylate cyclase, GGDEF domain E4O01_04985 PF00360 Phytochrome region E4O01_04990 PF00156 Phosphoribosyl transferase domain E4O01_04995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O01_04995 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O01_04995 PF16886 ATPsynthase alpha/beta subunit N-term extension E4O01_05000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O01_05000 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O01_05005 PF01813 ATP synthase subunit D E4O01_05020 PF01250 Ribosomal protein S6 E4O01_05025 PF00436 Single-strand binding protein family E4O01_05030 PF01084 Ribosomal protein S18 E4O01_05035 PF03948 Ribosomal protein L9, C-terminal domain E4O01_05035 PF01281 Ribosomal protein L9, N-terminal domain E4O01_05045 PF07724 AAA domain (Cdc48 subfamily) E4O01_05045 PF10431 C-terminal, D2-small domain, of ClpB protein E4O01_05045 PF06689 ClpX C4-type zinc finger E4O01_05050 PF00574 Clp protease E4O01_05055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O01_05055 PF05697 Bacterial trigger factor protein (TF) E4O01_05055 PF05698 Bacterial trigger factor protein (TF) C-terminus E4O01_05075 PF00155 Aminotransferase class I and II E4O01_05085 PF01008 Initiation factor 2 subunit family E4O01_05105 PF00772 DnaB-like helicase N terminal domain E4O01_05105 PF03796 DnaB-like helicase C terminal domain E4O01_05115 PF01411 tRNA synthetases class II (A) E4O01_05115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O01_05120 PF13145 PPIC-type PPIASE domain E4O01_05125 PF01029 NusB family E4O01_05140 PF00270 DEAD/DEAH box helicase E4O01_05140 PF04408 Helicase associated domain (HA2) E4O01_05140 PF00271 Helicase conserved C-terminal domain E4O01_05140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4O01_05145 PF02632 BioY family E4O01_05150 PF00005 ABC transporter E4O01_05170 PF01327 Polypeptide deformylase E4O01_05175 PF00551 Formyl transferase E4O01_05175 PF02911 Formyl transferase, C-terminal domain E4O01_05180 PF03793 PASTA domain E4O01_05190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4O01_05195 PF08501 Shikimate dehydrogenase substrate binding domain E4O01_05195 PF01488 Shikimate / quinate 5-dehydrogenase E4O01_05195 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4O01_05205 PF01121 Dephospho-CoA kinase E4O01_05210 PF00476 DNA polymerase family A E4O01_05210 PF01367 5'-3' exonuclease, C-terminal SAM fold E4O01_05210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4O01_05210 PF01612 3'-5' exonuclease E4O01_05230 PF06857 Malonate decarboxylase delta subunit (MdcD) E4O01_05235 PF03328 HpcH/HpaI aldolase/citrate lyase family E4O01_05240 PF04223 Citrate lyase, alpha subunit (CitF) E4O01_05250 PF01418 Helix-turn-helix domain, rpiR family E4O01_05250 PF01380 SIS domain E4O01_05255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O01_05255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O01_05260 PF02447 GntP family permease E4O01_05265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O01_05265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O01_05270 PF01116 Fructose-bisphosphate aldolase class-II E4O01_05280 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_05280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O01_05285 PF01571 Aminomethyltransferase folate-binding domain E4O01_05285 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4O01_05290 PF01597 Glycine cleavage H-protein E4O01_05295 PF02347 Glycine cleavage system P-protein E4O01_05300 PF02347 Glycine cleavage system P-protein E4O01_05310 PF01022 Bacterial regulatory protein, arsR family E4O01_05315 PF00881 Nitroreductase family E4O01_05340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O01_05340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O01_05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_05345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O01_05350 PF02256 Iron hydrogenase small subunit E4O01_05350 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O01_05350 PF00037 4Fe-4S binding domain E4O01_05350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4O01_05400 PF00293 NUDIX domain E4O01_05405 PF00881 Nitroreductase family E4O01_05415 PF00293 NUDIX domain E4O01_05450 PF01888 CbiD E4O01_05455 PF00005 ABC transporter E4O01_05455 PF12848 ABC transporter E4O01_05460 PF01513 ATP-NAD kinase E4O01_05470 PF01584 CheW-like domain E4O01_05475 PF00579 tRNA synthetases class I (W and Y) E4O01_05480 PF01336 OB-fold nucleic acid binding domain E4O01_05480 PF02938 GAD domain E4O01_05480 PF00152 tRNA synthetases class II (D, K and N) E4O01_05500 PF00534 Glycosyl transferases group 1 E4O01_05500 PF08323 Starch synthase catalytic domain E4O01_05535 PF01938 TRAM domain E4O01_05535 PF04055 Radical SAM superfamily E4O01_05535 PF00919 Uncharacterized protein family UPF0004 E4O01_05540 PF04055 Radical SAM superfamily E4O01_05545 PF10437 Bacterial lipoate protein ligase C-terminus E4O01_05545 PF03099 Biotin/lipoate A/B protein ligase family E4O01_05550 PF00005 ABC transporter E4O01_05550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_05555 PF00005 ABC transporter E4O01_05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_05560 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_05560 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O01_05565 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_05570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O01_05575 PF00365 Phosphofructokinase E4O01_05580 PF13662 Toprim domain E4O01_05580 PF02132 RecR protein E4O01_05585 PF02575 YbaB/EbfC DNA-binding family E4O01_05590 PF01351 Ribonuclease HII E4O01_05610 PF02618 YceG-like family E4O01_05625 PF03692 Putative zinc- or iron-chelating domain E4O01_05645 PF00533 BRCA1 C Terminus (BRCT) domain E4O01_05645 PF01653 NAD-dependent DNA ligase adenylation domain E4O01_05645 PF03120 NAD-dependent DNA ligase OB-fold domain E4O01_05650 PF00348 Polyprenyl synthetase E4O01_05660 PF13277 YmdB-like protein E4O01_05685 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E4O01_05685 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4O01_05690 PF08218 Citrate lyase ligase C-terminal domain E4O01_05695 PF05683 Fumarase C-terminus E4O01_05695 PF05681 Fumarate hydratase (Fumerase) E4O01_05700 PF05681 Fumarate hydratase (Fumerase) E4O01_05720 PF00005 ABC transporter E4O01_05725 PF02687 FtsX-like permease family E4O01_05725 PF12704 MacB-like periplasmic core domain E4O01_05740 PF10634 Fe2+ transport protein E4O01_05745 PF03239 Iron permease FTR1 family E4O01_05750 PF00005 ABC transporter E4O01_05760 PF03315 Serine dehydratase beta chain E4O01_05760 PF01842 ACT domain E4O01_05765 PF03313 Serine dehydratase alpha chain E4O01_05775 PF01197 Ribosomal protein L31 E4O01_05780 PF07497 Rho termination factor, RNA-binding domain E4O01_05780 PF07498 Rho termination factor, N-terminal domain E4O01_05780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O01_05795 PF00391 PEP-utilising enzyme, mobile domain E4O01_05795 PF02896 PEP-utilising enzyme, TIM barrel domain E4O01_05795 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4O01_05805 PF10397 Adenylosuccinate lyase C-terminus E4O01_05805 PF00206 Lyase E4O01_05810 PF00072 Response regulator receiver domain E4O01_05810 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O01_05820 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_05860 PF13525 Outer membrane lipoprotein E4O01_05870 PF02463 RecF/RecN/SMC N terminal domain E4O01_05870 PF06470 SMC proteins Flexible Hinge Domain E4O01_05880 PF00072 Response regulator receiver domain E4O01_05890 PF01584 CheW-like domain E4O01_05895 PF01627 Hpt domain E4O01_05895 PF01584 CheW-like domain E4O01_05895 PF02895 Signal transducing histidine kinase, homodimeric domain E4O01_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_05895 PF07194 P2 response regulator binding domain E4O01_05910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4O01_05910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4O01_05915 PF01709 Transcriptional regulator E4O01_05925 PF01321 Creatinase/Prolidase N-terminal domain E4O01_05925 PF00557 Metallopeptidase family M24 E4O01_05950 PF00700 Bacterial flagellin C-terminal helical region E4O01_05950 PF00669 Bacterial flagellin N-terminal helical region E4O01_05955 PF00669 Bacterial flagellin N-terminal helical region E4O01_05955 PF00700 Bacterial flagellin C-terminal helical region E4O01_05965 PF02465 Flagellar hook-associated protein 2 N-terminus E4O01_05965 PF07195 Flagellar hook-associated protein 2 C-terminus E4O01_05980 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4O01_05990 PF00672 HAMP domain E4O01_05990 PF01966 HD domain E4O01_05995 PF06969 HemN C-terminal domain E4O01_05995 PF04055 Radical SAM superfamily E4O01_06000 PF10502 Signal peptidase, peptidase S26 E4O01_06005 PF01668 SmpB protein E4O01_06015 PF01300 Telomere recombination E4O01_06035 PF01973 Protein of unknown function DUF115 E4O01_06050 PF00005 ABC transporter E4O01_06080 PF00512 His Kinase A (phospho-acceptor) domain E4O01_06080 PF12833 Helix-turn-helix domain E4O01_06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_06080 PF00072 Response regulator receiver domain E4O01_06080 PF07495 Y_Y_Y domain E4O01_06080 PF07494 Two component regulator propeller E4O01_06085 PF00072 Response regulator receiver domain E4O01_06085 PF00486 Transcriptional regulatory protein, C terminal E4O01_06095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4O01_06105 PF00488 MutS domain V E4O01_06105 PF01713 Smr domain E4O01_06110 PF03193 RsgA GTPase E4O01_06110 PF16745 RsgA N-terminal domain E4O01_06115 PF01177 Asp/Glu/Hydantoin racemase E4O01_06135 PF10996 Beta-Casp domain E4O01_06135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4O01_06135 PF00753 Metallo-beta-lactamase superfamily E4O01_06140 PF00588 SpoU rRNA Methylase family E4O01_06140 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O01_06145 PF13393 Histidyl-tRNA synthetase E4O01_06150 PF16363 GDP-mannose 4,6 dehydratase E4O01_06155 PF00483 Nucleotidyl transferase E4O01_06160 PF01370 NAD dependent epimerase/dehydratase family E4O01_06165 PF13439 Glycosyltransferase Family 4 E4O01_06165 PF00534 Glycosyl transferases group 1 E4O01_06175 PF14849 YidC periplasmic domain E4O01_06175 PF02096 60Kd inner membrane protein E4O01_06180 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E4O01_06190 PF14849 YidC periplasmic domain E4O01_06190 PF02096 60Kd inner membrane protein E4O01_06200 PF00535 Glycosyl transferase family 2 E4O01_06205 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E4O01_06210 PF01501 Glycosyl transferase family 8 E4O01_06210 PF00535 Glycosyl transferase family 2 E4O01_06225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O01_06245 PF00535 Glycosyl transferase family 2 E4O01_06250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4O01_06250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4O01_06250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4O01_06260 PF00535 Glycosyl transferase family 2 E4O01_06270 PF03102 NeuB family E4O01_06270 PF08666 SAF domain E4O01_06290 PF02911 Formyl transferase, C-terminal domain E4O01_06290 PF00551 Formyl transferase E4O01_06290 PF01370 NAD dependent epimerase/dehydratase family E4O01_06300 PF02911 Formyl transferase, C-terminal domain E4O01_06300 PF00551 Formyl transferase E4O01_06340 PF16254 Domain of unknown function (DUF4910) E4O01_06340 PF09940 Domain of unknown function (DUF2172) E4O01_06340 PF16221 winged helix-turn-helix E4O01_06350 PF00202 Aminotransferase class-III E4O01_06355 PF02348 Cytidylyltransferase E4O01_06365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O01_06370 PF02719 Polysaccharide biosynthesis protein E4O01_06400 PF13173 AAA domain E4O01_06400 PF13635 Domain of unknown function (DUF4143) E4O01_06405 PF00266 Aminotransferase class-V E4O01_06410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O01_06410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4O01_06430 PF00999 Sodium/hydrogen exchanger family E4O01_06455 PF01966 HD domain E4O01_06470 PF08239 Bacterial SH3 domain E4O01_06475 PF12848 ABC transporter E4O01_06475 PF00005 ABC transporter E4O01_06475 PF16326 ABC transporter C-terminal domain E4O01_06490 PF02540 NAD synthase E4O01_06495 PF01790 Prolipoprotein diacylglyceryl transferase E4O01_06505 PF10609 NUBPL iron-transfer P-loop NTPase E4O01_06535 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O01_06535 PF13237 4Fe-4S dicluster domain E4O01_06535 PF13375 RnfC Barrel sandwich hybrid domain E4O01_06535 PF10531 SLBB domain E4O01_06550 PF00849 RNA pseudouridylate synthase E4O01_06550 PF01479 S4 domain E4O01_06555 PF00403 Heavy-metal-associated domain E4O01_06560 PF01022 Bacterial regulatory protein, arsR family E4O01_06565 PF01991 ATP synthase (E/31 kDa) subunit E4O01_06585 PF04060 Putative Fe-S cluster E4O01_06590 PF07650 KH domain E4O01_06590 PF01926 50S ribosome-binding GTPase E4O01_06595 PF01808 AICARFT/IMPCHase bienzyme E4O01_06595 PF02142 MGS-like domain E4O01_06600 PF00551 Formyl transferase E4O01_06605 PF02810 SEC-C motif E4O01_06605 PF01043 SecA preprotein cross-linking domain E4O01_06605 PF07516 SecA Wing and Scaffold domain E4O01_06605 PF07517 SecA DEAD-like domain E4O01_06610 PF00392 Bacterial regulatory proteins, gntR family E4O01_06615 PF00005 ABC transporter E4O01_06630 PF01648 4'-phosphopantetheinyl transferase superfamily E4O01_06640 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4O01_06645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4O01_06645 PF02779 Transketolase, pyrimidine binding domain E4O01_06645 PF02780 Transketolase, C-terminal domain E4O01_06650 PF06971 Putative DNA-binding protein N-terminus E4O01_06650 PF02629 CoA binding domain E4O01_06655 PF10672 S-adenosylmethionine-dependent methyltransferase E4O01_06660 PF17864 RuvB AAA lid domain E4O01_06660 PF05491 RuvB C-terminal winged helix domain E4O01_06660 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O01_06665 PF00465 Iron-containing alcohol dehydrogenase E4O01_06670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O01_06670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O01_06685 PF13186 Iron-sulfur cluster-binding domain E4O01_06700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O01_06720 PF03484 tRNA synthetase B5 domain E4O01_06720 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4O01_06735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4O01_06755 PF01479 S4 domain E4O01_06755 PF00163 Ribosomal protein S4/S9 N-terminal domain E4O01_06785 PF02653 Branched-chain amino acid transport system / permease component E4O01_06790 PF02653 Branched-chain amino acid transport system / permease component E4O01_06795 PF00005 ABC transporter E4O01_06800 PF02608 ABC transporter substrate-binding protein PnrA-like E4O01_06805 PF00753 Metallo-beta-lactamase superfamily E4O01_06805 PF12706 Beta-lactamase superfamily domain E4O01_06825 PF10458 Valyl tRNA synthetase tRNA binding arm E4O01_06825 PF08264 Anticodon-binding domain of tRNA E4O01_06825 PF00133 tRNA synthetases class I (I, L, M and V) E4O01_06830 PF06421 GTP-binding protein LepA C-terminus E4O01_06830 PF03144 Elongation factor Tu domain 2 E4O01_06830 PF00009 Elongation factor Tu GTP binding domain E4O01_06830 PF14492 Elongation Factor G, domain II E4O01_06830 PF00679 Elongation factor G C-terminus E4O01_06835 PF01467 Cytidylyltransferase-like E4O01_06845 PF00773 RNB domain E4O01_06850 PF01256 Carbohydrate kinase E4O01_06850 PF03853 YjeF-related protein N-terminus E4O01_06855 PF02151 UvrB/uvrC motif E4O01_06855 PF17757 UvrB interaction domain E4O01_06855 PF00271 Helicase conserved C-terminal domain E4O01_06855 PF04851 Type III restriction enzyme, res subunit E4O01_06855 PF12344 Ultra-violet resistance protein B E4O01_06860 PF00005 ABC transporter E4O01_06895 PF00664 ABC transporter transmembrane region E4O01_06895 PF00005 ABC transporter E4O01_06900 PF04954 Siderophore-interacting protein E4O01_06900 PF00664 ABC transporter transmembrane region E4O01_06900 PF00005 ABC transporter E4O01_06900 PF08021 Siderophore-interacting FAD-binding domain E4O01_06905 PF12833 Helix-turn-helix domain E4O01_06905 PF02311 AraC-like ligand binding domain E4O01_06915 PF00005 ABC transporter E4O01_06930 PF00005 ABC transporter E4O01_06935 PF00005 ABC transporter E4O01_06935 PF00664 ABC transporter transmembrane region E4O01_06935 PF03412 Peptidase C39 family E4O01_06945 PF04055 Radical SAM superfamily E4O01_06945 PF13186 Iron-sulfur cluster-binding domain E4O01_06995 PF08279 HTH domain E4O01_06995 PF13280 WYL domain E4O01_07000 PF00009 Elongation factor Tu GTP binding domain E4O01_07000 PF03144 Elongation factor Tu domain 2 E4O01_07000 PF09105 Elongation factor SelB, winged helix E4O01_07000 PF09106 Elongation factor SelB, winged helix E4O01_07000 PF09107 Elongation factor SelB, winged helix E4O01_07005 PF02690 Na+/Pi-cotransporter E4O01_07010 PF00999 Sodium/hydrogen exchanger family E4O01_07015 PF13180 PDZ domain E4O01_07015 PF17820 PDZ domain E4O01_07025 PF01728 FtsJ-like methyltransferase E4O01_07030 PF02954 Bacterial regulatory protein, Fis family E4O01_07030 PF00072 Response regulator receiver domain E4O01_07030 PF00158 Sigma-54 interaction domain E4O01_07035 PF00989 PAS fold E4O01_07035 PF00512 His Kinase A (phospho-acceptor) domain E4O01_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_07040 PF09115 DNA polymerase III, delta subunit, C terminal E4O01_07045 PF02674 Colicin V production protein E4O01_07060 PF04101 Glycosyltransferase family 28 C-terminal domain E4O01_07060 PF03033 Glycosyltransferase family 28 N-terminal domain E4O01_07065 PF00455 DeoR C terminal sensor domain E4O01_07065 PF08220 DeoR-like helix-turn-helix domain E4O01_07070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E4O01_07080 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E4O01_07085 PF07005 Sugar-binding N-terminal domain E4O01_07085 PF17042 Nucleotide-binding C-terminal domain E4O01_07090 PF03812 2-keto-3-deoxygluconate permease E4O01_07110 PF06733 DEAD_2 E4O01_07110 PF13307 Helicase C-terminal domain E4O01_07115 PF00456 Transketolase, thiamine diphosphate binding domain E4O01_07115 PF02779 Transketolase, pyrimidine binding domain E4O01_07130 PF02463 RecF/RecN/SMC N terminal domain E4O01_07150 PF05257 CHAP domain E4O01_07150 PF01476 LysM domain E4O01_07160 PF02603 HPr Serine kinase N terminus E4O01_07160 PF07475 HPr Serine kinase C-terminal domain E4O01_07165 PF00381 PTS HPr component phosphorylation site E4O01_07170 PF01523 Putative modulator of DNA gyrase E4O01_07195 PF00005 ABC transporter E4O01_07230 PF17757 UvrB interaction domain E4O01_07230 PF02559 CarD-like/TRCF domain E4O01_07230 PF00270 DEAD/DEAH box helicase E4O01_07230 PF00271 Helicase conserved C-terminal domain E4O01_07230 PF03461 TRCF domain E4O01_07280 PF04773 FecR protein E4O01_07285 PF00672 HAMP domain E4O01_07285 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O01_07320 PF00586 AIR synthase related protein, N-terminal domain E4O01_07320 PF02769 AIR synthase related protein, C-terminal domain E4O01_07320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4O01_07325 PF04260 Protein of unknown function (DUF436) E4O01_07330 PF08011 PD-(D/E)XK nuclease superfamily E4O01_07330 PF09820 Predicted AAA-ATPase E4O01_07335 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O01_07335 PF02256 Iron hydrogenase small subunit E4O01_07335 PF12838 4Fe-4S dicluster domain E4O01_07340 PF01609 Transposase DDE domain E4O01_07340 PF05598 Transposase domain (DUF772) E4O01_07345 PF04556 DpnII restriction endonuclease E4O01_07350 PF01555 DNA methylase E4O01_07365 PF02843 Phosphoribosylglycinamide synthetase, C domain E4O01_07365 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4O01_07365 PF02844 Phosphoribosylglycinamide synthetase, N domain E4O01_07370 PF00586 AIR synthase related protein, N-terminal domain E4O01_07370 PF02769 AIR synthase related protein, C-terminal domain E4O01_07375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_07375 PF00672 HAMP domain E4O01_07375 PF02743 Cache domain E4O01_07380 PF04551 GcpE protein E4O01_07395 PF02028 BCCT, betaine/carnitine/choline family transporter E4O01_07400 PF12804 MobA-like NTP transferase domain E4O01_07405 PF01235 Sodium:alanine symporter family E4O01_07430 PF01713 Smr domain E4O01_07450 PF00092 von Willebrand factor type A domain E4O01_07460 PF01882 Protein of unknown function DUF58 E4O01_07480 PF00571 CBS domain E4O01_07480 PF03471 Transporter associated domain E4O01_07485 PF02130 Uncharacterized protein family UPF0054 E4O01_07490 PF01966 HD domain E4O01_07490 PF07697 7TM-HD extracellular E4O01_07490 PF07698 7TM receptor with intracellular HD hydrolase E4O01_07495 PF02562 PhoH-like protein E4O01_07510 PF00121 Triosephosphate isomerase E4O01_07530 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4O01_07530 PF00753 Metallo-beta-lactamase superfamily E4O01_07545 PF10282 Lactonase, 7-bladed beta-propeller E4O01_07550 PF01297 Zinc-uptake complex component A periplasmic E4O01_07555 PF00005 ABC transporter E4O01_07560 PF00950 ABC 3 transport family E4O01_07565 PF00950 ABC 3 transport family E4O01_07575 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O01_07590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O01_07590 PF18269 T3SS EscN ATPase C-terminal domain E4O01_07590 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O01_07595 PF02108 Flagellar assembly protein FliH E4O01_07600 PF14841 FliG middle domain E4O01_07600 PF01706 FliG C-terminal domain E4O01_07600 PF14842 FliG N-terminal domain E4O01_07605 PF01514 Secretory protein of YscJ/FliF family E4O01_07605 PF08345 Flagellar M-ring protein C-terminal E4O01_07610 PF02049 Flagellar hook-basal body complex protein FliE E4O01_07615 PF00460 Flagella basal body rod protein E4O01_07615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O01_07620 PF00460 Flagella basal body rod protein E4O01_07625 PF00004 ATPase family associated with various cellular activities (AAA) E4O01_07625 PF07724 AAA domain (Cdc48 subfamily) E4O01_07630 PF00227 Proteasome subunit E4O01_07635 PF02899 Phage integrase, N-terminal SAM-like domain E4O01_07635 PF00589 Phage integrase family E4O01_07640 PF01751 Toprim domain E4O01_07640 PF01131 DNA topoisomerase E4O01_07640 PF01396 Topoisomerase DNA binding C4 zinc finger E4O01_07645 PF02481 DNA recombination-mediator protein A E4O01_07645 PF17782 DprA winged helix domain E4O01_07655 PF00589 Phage integrase family E4O01_07655 PF02899 Phage integrase, N-terminal SAM-like domain E4O01_07660 PF12327 FtsZ family, C-terminal domain E4O01_07660 PF00091 Tubulin/FtsZ family, GTPase domain E4O01_07665 PF02491 SHS2 domain inserted in FTSA E4O01_07675 PF01098 Cell cycle protein E4O01_07680 PF08245 Mur ligase middle domain E4O01_07680 PF02875 Mur ligase family, glutamate ligase domain E4O01_07680 PF01225 Mur ligase family, catalytic domain E4O01_07690 PF01795 MraW methylase family E4O01_07695 PF02381 MraZ protein, putative antitoxin-like E4O01_07700 PF00326 Prolyl oligopeptidase family E4O01_07700 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O01_07735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4O01_07735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4O01_07735 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4O01_07745 PF02233 NAD(P) transhydrogenase beta subunit E4O01_07780 PF04055 Radical SAM superfamily E4O01_07785 PF00118 TCP-1/cpn60 chaperonin family E4O01_07800 PF01264 Chorismate synthase E4O01_07805 PF02390 Putative methyltransferase E4O01_07845 PF01740 STAS domain E4O01_07865 PF01212 Beta-eliminating lyase E4O01_07870 PF05191 Adenylate kinase, active site lid E4O01_07885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4O01_07885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4O01_07890 PF02576 RimP N-terminal domain E4O01_07890 PF17384 RimP C-terminal SH3 domain E4O01_07895 PF13184 NusA-like KH domain E4O01_07895 PF08529 NusA N-terminal domain E4O01_07895 PF00575 S1 RNA binding domain E4O01_07900 PF04760 Translation initiation factor IF-2, N-terminal region E4O01_07900 PF11987 Translation-initiation factor 2 E4O01_07900 PF00009 Elongation factor Tu GTP binding domain E4O01_07905 PF02033 Ribosome-binding factor A E4O01_07910 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4O01_07920 PF00005 ABC transporter E4O01_07925 PF00005 ABC transporter E4O01_07925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_07930 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_07930 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O01_07935 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_07940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O01_07945 PF12833 Helix-turn-helix domain E4O01_07945 PF01965 DJ-1/PfpI family E4O01_07970 PF02401 LytB protein E4O01_07975 PF00842 Alanine racemase, C-terminal domain E4O01_07975 PF01168 Alanine racemase, N-terminal domain E4O01_07985 PF16258 Domain of unknown function (DUF4912) E4O01_08000 PF03129 Anticodon binding domain E4O01_08000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O01_08000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O01_08020 PF08340 Domain of unknown function (DUF1732) E4O01_08020 PF03755 YicC-like family, N-terminal region E4O01_08025 PF08245 Mur ligase middle domain E4O01_08025 PF02875 Mur ligase family, glutamate ligase domain E4O01_08025 PF01225 Mur ligase family, catalytic domain E4O01_08030 PF02875 Mur ligase family, glutamate ligase domain E4O01_08030 PF08245 Mur ligase middle domain E4O01_08035 PF00849 RNA pseudouridylate synthase E4O01_08035 PF01479 S4 domain E4O01_08040 PF00849 RNA pseudouridylate synthase E4O01_08050 PF00398 Ribosomal RNA adenine dimethylase E4O01_08055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4O01_08060 PF00753 Metallo-beta-lactamase superfamily E4O01_08060 PF00258 Flavodoxin E4O01_08065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_08065 PF00005 ABC transporter E4O01_08070 PF00005 ABC transporter E4O01_08070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_08075 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_08075 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O01_08080 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_08090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O01_08095 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_08100 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_08100 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O01_08105 PF00005 ABC transporter E4O01_08105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_08110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_08110 PF00005 ABC transporter E4O01_08130 PF09334 tRNA synthetases class I (M) E4O01_08130 PF01588 Putative tRNA binding domain E4O01_08140 PF00005 ABC transporter E4O01_08145 PF00005 ABC transporter E4O01_08160 PF01554 MatE E4O01_08165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_08165 PF00672 HAMP domain E4O01_08165 PF02743 Cache domain E4O01_08180 PF13333 Integrase core domain E4O01_08180 PF00665 Integrase core domain E4O01_08180 PF13276 HTH-like domain E4O01_08200 PF00301 Rubredoxin E4O01_08215 PF14492 Elongation Factor G, domain II E4O01_08215 PF03764 Elongation factor G, domain IV E4O01_08215 PF00009 Elongation factor Tu GTP binding domain E4O01_08215 PF03144 Elongation factor Tu domain 2 E4O01_08215 PF00679 Elongation factor G C-terminus E4O01_08220 PF00177 Ribosomal protein S7p/S5e E4O01_08225 PF00164 Ribosomal protein S12/S23 E4O01_08255 PF00436 Single-strand binding protein family E4O01_08490 PF11756 Nitrous oxide-stimulated promoter E4O01_08495 PF04304 Protein of unknown function (DUF454) E4O01_08500 PF03932 CutC family E4O01_08510 PF00986 DNA gyrase B subunit, carboxyl terminus E4O01_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_08510 PF00204 DNA gyrase B E4O01_08510 PF01751 Toprim domain E4O01_08525 PF00899 ThiF family E4O01_08530 PF00953 Glycosyl transferase family 4 E4O01_08540 PF00860 Permease family E4O01_08560 PF00149 Calcineurin-like phosphoesterase E4O01_08560 PF17936 Bacterial Ig domain E4O01_08560 PF02872 5'-nucleotidase, C-terminal domain E4O01_08575 PF16325 Peptidase family U32 C-terminal domain E4O01_08575 PF01136 Peptidase family U32 E4O01_08580 PF07859 alpha/beta hydrolase fold E4O01_08585 PF00664 ABC transporter transmembrane region E4O01_08585 PF00005 ABC transporter E4O01_08590 PF01725 Ham1 family E4O01_08600 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4O01_08605 PF01416 tRNA pseudouridine synthase E4O01_08615 PF02146 Sir2 family E4O01_08620 PF08668 HDOD domain E4O01_08635 PF00152 tRNA synthetases class II (D, K and N) E4O01_08640 PF00005 ABC transporter E4O01_08640 PF02687 FtsX-like permease family E4O01_08640 PF12704 MacB-like periplasmic core domain E4O01_08645 PF00005 ABC transporter E4O01_08660 PF03819 MazG nucleotide pyrophosphohydrolase domain E4O01_08665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O01_08665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4O01_08670 PF03129 Anticodon binding domain E4O01_08670 PF02824 TGS domain E4O01_08670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O01_08670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O01_08680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4O01_08680 PF02542 YgbB family E4O01_08685 PF02542 YgbB family E4O01_08700 PF00924 Mechanosensitive ion channel E4O01_08715 PF10509 Galactokinase galactose-binding signature E4O01_08715 PF08544 GHMP kinases C terminal E4O01_08720 PF00795 Carbon-nitrogen hydrolase E4O01_08725 PF00595 PDZ domain E4O01_08735 PF00072 Response regulator receiver domain E4O01_08740 PF02021 Uncharacterised protein family UPF0102 E4O01_08755 PF02403 Seryl-tRNA synthetase N-terminal domain E4O01_08755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O01_08775 PF00158 Sigma-54 interaction domain E4O01_08775 PF01590 GAF domain E4O01_08780 PF01168 Alanine racemase, N-terminal domain E4O01_08800 PF03006 Haemolysin-III related E4O01_08805 PF01464 Transglycosylase SLT domain E4O01_08805 PF01551 Peptidase family M23 E4O01_08805 PF10145 Phage-related minor tail protein E4O01_08830 PF00924 Mechanosensitive ion channel E4O01_08835 PF00196 Bacterial regulatory proteins, luxR family E4O01_08835 PF00072 Response regulator receiver domain E4O01_08845 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O01_08850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_08850 PF02743 Cache domain E4O01_08850 PF00672 HAMP domain E4O01_08855 PF00004 ATPase family associated with various cellular activities (AAA) E4O01_08855 PF07724 AAA domain (Cdc48 subfamily) E4O01_08855 PF17871 AAA lid domain E4O01_08855 PF10431 C-terminal, D2-small domain, of ClpB protein E4O01_08855 PF02861 Clp amino terminal domain, pathogenicity island component E4O01_08860 PF03806 AbgT putative transporter family E4O01_08870 PF03601 Conserved hypothetical protein 698 E4O01_08880 PF07885 Ion channel E4O01_08880 PF02254 TrkA-N domain E4O01_08885 PF05343 M42 glutamyl aminopeptidase E4O01_08900 PF00155 Aminotransferase class I and II E4O01_08920 PF00343 Carbohydrate phosphorylase E4O01_08940 PF04997 RNA polymerase Rpb1, domain 1 E4O01_08940 PF00623 RNA polymerase Rpb1, domain 2 E4O01_08940 PF04983 RNA polymerase Rpb1, domain 3 E4O01_08940 PF05000 RNA polymerase Rpb1, domain 4 E4O01_08940 PF04998 RNA polymerase Rpb1, domain 5 E4O01_08945 PF00562 RNA polymerase Rpb2, domain 6 E4O01_08945 PF10385 RNA polymerase beta subunit external 1 domain E4O01_08945 PF04560 RNA polymerase Rpb2, domain 7 E4O01_08945 PF04561 RNA polymerase Rpb2, domain 2 E4O01_08945 PF04563 RNA polymerase beta subunit E4O01_08945 PF04565 RNA polymerase Rpb2, domain 3 E4O01_08950 PF00542 Ribosomal protein L7/L12 C-terminal domain E4O01_08950 PF16320 Ribosomal protein L7/L12 dimerisation domain E4O01_08955 PF00466 Ribosomal protein L10 E4O01_08960 PF00687 Ribosomal protein L1p/L10e family E4O01_08965 PF00298 Ribosomal protein L11, RNA binding domain E4O01_08965 PF03946 Ribosomal protein L11, N-terminal domain E4O01_08970 PF02357 Transcription termination factor nusG E4O01_08970 PF00467 KOW motif E4O01_08975 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4O01_08985 PF00471 Ribosomal protein L33 E4O01_09005 PF00005 ABC transporter E4O01_09005 PF00664 ABC transporter transmembrane region E4O01_09005 PF03412 Peptidase C39 family E4O01_09020 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain E4O01_09020 PF01522 Polysaccharide deacetylase E4O01_09035 PF00664 ABC transporter transmembrane region E4O01_09035 PF00005 ABC transporter E4O01_09035 PF03412 Peptidase C39 family E4O01_09055 PF01381 Helix-turn-helix E4O01_09065 PF00390 Malic enzyme, N-terminal domain E4O01_09065 PF03949 Malic enzyme, NAD binding domain E4O01_09070 PF01202 Shikimate kinase E4O01_09080 PF09820 Predicted AAA-ATPase E4O01_09080 PF08011 PD-(D/E)XK nuclease superfamily E4O01_09085 PF01871 AMMECR1 E4O01_09085 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4O01_09090 PF12796 Ankyrin repeats (3 copies) E4O01_09095 PF02547 Queuosine biosynthesis protein E4O01_09105 PF00005 ABC transporter E4O01_09115 PF00005 ABC transporter E4O01_09165 PF00266 Aminotransferase class-V E4O01_09185 PF01206 Sulfurtransferase TusA E4O01_09200 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4O01_09200 PF02772 S-adenosylmethionine synthetase, central domain E4O01_09200 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4O01_09215 PF00183 Hsp90 protein E4O01_09250 PF01165 Ribosomal protein S21 E4O01_09255 PF01554 MatE E4O01_09260 PF00696 Amino acid kinase family E4O01_09265 PF12390 Selenocysteine synthase N terminal E4O01_09265 PF03841 L-seryl-tRNA selenium transferase E4O01_09270 PF09820 Predicted AAA-ATPase E4O01_09270 PF08011 PD-(D/E)XK nuclease superfamily E4O01_09275 PF02151 UvrB/uvrC motif E4O01_09275 PF01541 GIY-YIG catalytic domain E4O01_09275 PF08459 UvrC Helix-hairpin-helix N-terminal E4O01_09290 PF00593 TonB dependent receptor E4O01_09290 PF07715 TonB-dependent Receptor Plug Domain E4O01_09300 PF02472 Biopolymer transport protein ExbD/TolR E4O01_09305 PF01618 MotA/TolQ/ExbB proton channel family E4O01_09325 PF12106 Colicin E5 ribonuclease domain E4O01_09330 PF11480 Colicin-E5 Imm protein E4O01_09360 PF05593 RHS Repeat E4O01_09360 PF05488 PAAR motif E4O01_09395 PF00580 UvrD/REP helicase N-terminal domain E4O01_09395 PF13361 UvrD-like helicase C-terminal domain E4O01_09400 PF00664 ABC transporter transmembrane region E4O01_09400 PF00005 ABC transporter E4O01_09405 PF00664 ABC transporter transmembrane region E4O01_09405 PF00005 ABC transporter E4O01_09410 PF00375 Sodium:dicarboxylate symporter family E4O01_09415 PF02073 Thermophilic metalloprotease (M29) E4O01_09420 PF10135 Rod binding protein E4O01_09425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O01_09425 PF00460 Flagella basal body rod protein E4O01_09430 PF00460 Flagella basal body rod protein E4O01_09430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O01_09435 PF00669 Bacterial flagellin N-terminal helical region E4O01_09435 PF00700 Bacterial flagellin C-terminal helical region E4O01_09440 PF00156 Phosphoribosyl transferase domain E4O01_09445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4O01_09445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4O01_09450 PF01226 Formate/nitrite transporter E4O01_09455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4O01_09455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4O01_09460 PF01204 Trehalase E4O01_09475 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4O01_09485 PF00830 Ribosomal L28 family E4O01_09495 PF00005 ABC transporter E4O01_09495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_09500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_09500 PF00005 ABC transporter E4O01_09505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O01_09510 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O01_09510 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_09515 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_09520 PF01180 Dihydroorotate dehydrogenase E4O01_09530 PF00152 tRNA synthetases class II (D, K and N) E4O01_09530 PF01336 OB-fold nucleic acid binding domain E4O01_09535 PF07943 Penicillin-binding protein 5, C-terminal domain E4O01_09535 PF00768 D-alanyl-D-alanine carboxypeptidase E4O01_09540 PF04002 RadC-like JAB domain E4O01_09545 PF00156 Phosphoribosyl transferase domain E4O01_09550 PF00750 tRNA synthetases class I (R) E4O01_09550 PF05746 DALR anticodon binding domain E4O01_09550 PF03485 Arginyl tRNA synthetase N terminal domain E4O01_09555 PF01132 Elongation factor P (EF-P) OB domain E4O01_09555 PF09285 Elongation factor P, C-terminal E4O01_09555 PF08207 Elongation factor P (EF-P) KOW-like domain E4O01_09570 PF13277 YmdB-like protein E4O01_09580 PF00817 impB/mucB/samB family E4O01_09580 PF11798 IMS family HHH motif E4O01_09580 PF11799 impB/mucB/samB family C-terminal domain E4O01_09595 PF08666 SAF domain E4O01_09595 PF03102 NeuB family E4O01_09600 PF07009 NusG domain II E4O01_09605 PF01734 Patatin-like phospholipase E4O01_09610 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O01_09615 PF04011 LemA family E4O01_09620 PF02653 Branched-chain amino acid transport system / permease component E4O01_09625 PF02653 Branched-chain amino acid transport system / permease component E4O01_09630 PF00005 ABC transporter E4O01_09635 PF02608 ABC transporter substrate-binding protein PnrA-like E4O01_09845 PF05785 Rho-activating domain of cytotoxic necrotizing factor E4O01_09845 PF18807 Tripartite Tc toxins repeat E4O01_09900 PF18807 Tripartite Tc toxins repeat E4O01_09900 PF05785 Rho-activating domain of cytotoxic necrotizing factor E4O01_09950 PF03952 Enolase, N-terminal domain E4O01_09950 PF00113 Enolase, C-terminal TIM barrel domain E4O01_09965 PF03144 Elongation factor Tu domain 2 E4O01_09965 PF03764 Elongation factor G, domain IV E4O01_09965 PF00009 Elongation factor Tu GTP binding domain E4O01_09965 PF00679 Elongation factor G C-terminus E4O01_09965 PF14492 Elongation Factor G, domain II E4O01_09980 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_09995 PF00501 AMP-binding enzyme E4O01_09995 PF13193 AMP-binding enzyme C-terminal domain E4O01_10000 PF00877 NlpC/P60 family E4O01_10010 PF01963 TraB family E4O01_10015 PF01170 Putative RNA methylase family UPF0020 E4O01_10015 PF02926 THUMP domain E4O01_10020 PF03979 Sigma-70 factor, region 1.1 E4O01_10020 PF04542 Sigma-70 region 2 E4O01_10020 PF04539 Sigma-70 region 3 E4O01_10020 PF04545 Sigma-70, region 4 E4O01_10020 PF00140 Sigma-70 factor, region 1.2 E4O01_10025 PF00166 Chaperonin 10 Kd subunit E4O01_10045 PF00871 Acetokinase family E4O01_10050 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O01_10055 PF01554 MatE E4O01_10060 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O01_10060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O01_10090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O01_10090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O01_10095 PF00005 ABC transporter E4O01_10110 PF01546 Peptidase family M20/M25/M40 E4O01_10110 PF07687 Peptidase dimerisation domain E4O01_10140 PF00664 ABC transporter transmembrane region E4O01_10140 PF00005 ABC transporter E4O01_10145 PF04954 Siderophore-interacting protein E4O01_10145 PF08021 Siderophore-interacting FAD-binding domain E4O01_10145 PF00005 ABC transporter E4O01_10145 PF00664 ABC transporter transmembrane region E4O01_10160 PF00005 ABC transporter E4O01_10185 PF12833 Helix-turn-helix domain E4O01_10185 PF02311 AraC-like ligand binding domain E4O01_10190 PF01734 Patatin-like phospholipase E4O01_10220 PF00580 UvrD/REP helicase N-terminal domain E4O01_10220 PF13361 UvrD-like helicase C-terminal domain E4O01_10245 PF01245 Ribosomal protein L19 E4O01_10250 PF01746 tRNA (Guanine-1)-methyltransferase E4O01_10255 PF01782 RimM N-terminal domain E4O01_10265 PF00886 Ribosomal protein S16 E4O01_10270 PF02277 Phosphoribosyltransferase E4O01_10275 PF01381 Helix-turn-helix E4O01_10295 PF00849 RNA pseudouridylate synthase E4O01_10295 PF01479 S4 domain E4O01_10300 PF04079 Segregation and condensation complex subunit ScpB E4O01_10305 PF02616 Segregation and condensation protein ScpA E4O01_10310 PF00154 recA bacterial DNA recombination protein E4O01_10320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O01_10320 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_10340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O01_10340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O01_10340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O01_10340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O01_10345 PF02308 MgtC family E4O01_10360 PF04055 Radical SAM superfamily E4O01_10375 PF00730 HhH-GPD superfamily base excision DNA repair protein E4O01_10380 PF00224 Pyruvate kinase, barrel domain E4O01_10380 PF00391 PEP-utilising enzyme, mobile domain E4O01_10380 PF02887 Pyruvate kinase, alpha/beta domain E4O01_10400 PF00342 Phosphoglucose isomerase E4O01_10405 PF01926 50S ribosome-binding GTPase E4O01_10415 PF00849 RNA pseudouridylate synthase E4O01_10415 PF01479 S4 domain E4O01_10420 PF17191 RecG wedge domain E4O01_10420 PF00270 DEAD/DEAH box helicase E4O01_10420 PF00271 Helicase conserved C-terminal domain E4O01_10425 PF00990 Diguanylate cyclase, GGDEF domain E4O01_10430 PF00990 Diguanylate cyclase, GGDEF domain E4O01_10445 PF03577 Peptidase family C69 E4O01_10450 PF17202 Single cache domain 3 E4O01_10450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_10450 PF00672 HAMP domain E4O01_10455 PF12169 DNA polymerase III subunits gamma and tau domain III E4O01_10470 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O01_10475 PF17773 UPF0176 acylphosphatase like domain E4O01_10475 PF12368 Rhodanase C-terminal E4O01_10475 PF00581 Rhodanese-like domain E4O01_10480 PF00488 MutS domain V E4O01_10480 PF05192 MutS domain III E4O01_10480 PF05188 MutS domain II E4O01_10480 PF01624 MutS domain I E4O01_10480 PF05190 MutS family domain IV E4O01_10490 PF07244 Surface antigen variable number repeat E4O01_10490 PF01103 Surface antigen E4O01_10500 PF02223 Thymidylate kinase E4O01_10510 PF00834 Ribulose-phosphate 3 epimerase family E4O01_10530 PF00158 Sigma-54 interaction domain E4O01_10530 PF13185 GAF domain E4O01_10530 PF02954 Bacterial regulatory protein, Fis family E4O01_10535 PF03880 DbpA RNA binding domain E4O01_10545 PF07670 Nucleoside recognition E4O01_10550 PF01906 Putative heavy-metal-binding E4O01_10555 PF01175 Urocanase Rossmann-like domain E4O01_10555 PF17392 Urocanase C-terminal domain E4O01_10555 PF17391 Urocanase N-terminal domain E4O01_10560 PF13649 Methyltransferase domain E4O01_10565 PF02743 Cache domain E4O01_10565 PF00672 HAMP domain E4O01_10565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_10580 PF18693 TRAM domain E4O01_10580 PF00919 Uncharacterized protein family UPF0004 E4O01_10580 PF04055 Radical SAM superfamily E4O01_10600 PF02424 ApbE family E4O01_10605 PF01252 Signal peptidase (SPase) II E4O01_10610 PF13545 Crp-like helix-turn-helix domain E4O01_10610 PF00027 Cyclic nucleotide-binding domain E4O01_10620 PF02811 PHP domain E4O01_10625 PF05958 tRNA (Uracil-5-)-methyltransferase E4O01_10635 PF01145 SPFH domain / Band 7 family E4O01_10640 PF01145 SPFH domain / Band 7 family E4O01_10660 PF00005 ABC transporter E4O01_10665 PF08543 Phosphomethylpyrimidine kinase E4O01_10675 PF01636 Phosphotransferase enzyme family E4O01_10685 PF00731 AIR carboxylase E4O01_10690 PF01259 SAICAR synthetase E4O01_10700 PF00436 Single-strand binding protein family E4O01_10705 PF02699 Preprotein translocase subunit E4O01_10710 PF02355 Protein export membrane protein E4O01_10715 PF02355 Protein export membrane protein E4O01_10720 PF00266 Aminotransferase class-V E4O01_10730 PF01206 Sulfurtransferase TusA E4O01_10765 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4O01_10765 PF00004 ATPase family associated with various cellular activities (AAA) E4O01_10765 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O01_10790 PF01458 Uncharacterized protein family (UPF0051) E4O01_10795 PF00005 ABC transporter E4O01_10830 PF03390 2-hydroxycarboxylate transporter family E4O01_10870 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O01_10870 PF00588 SpoU rRNA Methylase family E4O01_10875 PF13419 Haloacid dehalogenase-like hydrolase E4O01_10885 PF00571 CBS domain E4O01_10885 PF01769 Divalent cation transporter E4O01_10885 PF03448 MgtE intracellular N domain E4O01_10895 PF04452 RNA methyltransferase E4O01_10920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O01_10920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O01_10925 PF14572 Phosphoribosyl synthetase-associated domain E4O01_10925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4O01_10930 PF00072 Response regulator receiver domain E4O01_10930 PF00990 Diguanylate cyclase, GGDEF domain E4O01_10935 PF00563 EAL domain E4O01_10935 PF00990 Diguanylate cyclase, GGDEF domain E4O01_10940 PF03193 RsgA GTPase E4O01_10950 PF01026 TatD related DNase E4O01_10955 PF01207 Dihydrouridine synthase (Dus) E4O01_10975 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_10980 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_10985 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_10990 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_10995 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_11000 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_11030 PF02899 Phage integrase, N-terminal SAM-like domain E4O01_11030 PF00589 Phage integrase family E4O01_11040 PF01420 Type I restriction modification DNA specificity domain E4O01_11045 PF13018 Extended Signal Peptide of Type V secretion system E4O01_11045 PF02661 Fic/DOC family E4O01_11045 PF13332 Hemagglutinin repeat E4O01_11045 PF05860 haemagglutination activity domain E4O01_11045 PF03543 Yersinia/Haemophilus virulence surface antigen E4O01_11050 PF12161 HsdM N-terminal domain E4O01_11050 PF02384 N-6 DNA Methylase E4O01_11055 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) E4O01_11055 PF04851 Type III restriction enzyme, res subunit E4O01_11055 PF08463 EcoEI R protein C-terminal E4O01_11055 PF00271 Helicase conserved C-terminal domain E4O01_11075 PF13167 GTP-binding GTPase N-terminal E4O01_11075 PF01926 50S ribosome-binding GTPase E4O01_11075 PF16360 GTP-binding GTPase Middle Region E4O01_11095 PF04225 Opacity-associated protein A LysM-like domain E4O01_11095 PF01551 Peptidase family M23 E4O01_11100 PF02423 Ornithine cyclodeaminase/mu-crystallin family E4O01_11105 PF01235 Sodium:alanine symporter family E4O01_11110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O01_11115 PF00813 FliP family E4O01_11125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O01_11125 PF04509 CheC-like family E4O01_11130 PF02154 Flagellar motor switch protein FliM E4O01_11130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O01_11135 PF03748 Flagellar basal body-associated protein FliL E4O01_11140 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4O01_11140 PF00691 OmpA family E4O01_11145 PF01618 MotA/TolQ/ExbB proton channel family E4O01_11155 PF07559 Flagellar basal body protein FlaE E4O01_11155 PF00460 Flagella basal body rod protein E4O01_11155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O01_11160 PF03963 Flagellar hook capping protein - N-terminal region E4O01_11180 PF03030 Inorganic H+ pyrophosphatase E4O01_11200 PF00072 Response regulator receiver domain E4O01_11200 PF01339 CheB methylesterase E4O01_11205 PF03705 CheR methyltransferase, all-alpha domain E4O01_11205 PF01739 CheR methyltransferase, SAM binding domain E4O01_11220 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O01_11220 PF00005 ABC transporter E4O01_11225 PF01195 Peptidyl-tRNA hydrolase E4O01_11235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O01_11240 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_11245 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O01_11245 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_11250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_11250 PF00005 ABC transporter E4O01_11255 PF00005 ABC transporter E4O01_11255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_11265 PF01545 Cation efflux family E4O01_11265 PF16916 Dimerisation domain of Zinc Transporter E4O01_11290 PF01556 DnaJ C terminal domain E4O01_11290 PF00226 DnaJ domain E4O01_11290 PF00684 DnaJ central domain E4O01_11295 PF00012 Hsp70 protein E4O01_11300 PF01025 GrpE E4O01_11305 PF02661 Fic/DOC family E4O01_11305 PF12728 Helix-turn-helix domain E4O01_11315 PF00005 ABC transporter E4O01_11320 PF02571 Precorrin-6x reductase CbiJ/CobK E4O01_11325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4O01_11325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O01_11330 PF08011 PD-(D/E)XK nuclease superfamily E4O01_11330 PF09820 Predicted AAA-ATPase E4O01_11345 PF01554 MatE E4O01_11355 PF11760 Cobalamin synthesis G N-terminal E4O01_11355 PF01890 Cobalamin synthesis G C-terminus E4O01_11355 PF11761 Cobalamin biosynthesis central region E4O01_11360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O01_11365 PF00005 ABC transporter E4O01_11365 PF00664 ABC transporter transmembrane region E4O01_11370 PF00005 ABC transporter E4O01_11370 PF16326 ABC transporter C-terminal domain E4O01_11370 PF12848 ABC transporter E4O01_11390 PF13614 AAA domain E4O01_11395 PF17762 HTH domain found in ParB protein E4O01_11395 PF02195 ParB-like nuclease domain E4O01_11430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O01_11430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4O01_11435 PF00698 Acyl transferase domain E4O01_11450 PF07055 Enoyl reductase FAD binding domain E4O01_11450 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4O01_11450 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4O01_11460 PF00270 DEAD/DEAH box helicase E4O01_11460 PF17191 RecG wedge domain E4O01_11460 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O01_11485 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_11500 PF00364 Biotin-requiring enzyme E4O01_11505 PF02785 Biotin carboxylase C-terminal domain E4O01_11505 PF00289 Biotin carboxylase, N-terminal domain E4O01_11505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4O01_11510 PF01039 Carboxyl transferase domain E4O01_11515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4O01_11520 PF00221 Aromatic amino acid lyase E4O01_11535 PF03773 Predicted permease E4O01_11545 PF07726 ATPase family associated with various cellular activities (AAA) E4O01_11545 PF17863 AAA lid domain E4O01_11585 PF01425 Amidase E4O01_11590 PF02934 GatB/GatE catalytic domain E4O01_11590 PF02637 GatB domain E4O01_11645 PF05593 RHS Repeat E4O01_11645 PF05488 PAAR motif E4O01_11660 PF05488 PAAR motif E4O01_11660 PF05593 RHS Repeat E4O01_11670 PF05488 PAAR motif E4O01_11670 PF05593 RHS Repeat E4O01_11725 PF05593 RHS Repeat E4O01_11725 PF03527 RHS protein E4O01_11735 PF05593 RHS Repeat E4O01_11735 PF03527 RHS protein E4O01_11800 PF17191 RecG wedge domain E4O01_11800 PF00270 DEAD/DEAH box helicase E4O01_11800 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O01_11845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_11845 PF02743 Cache domain E4O01_11845 PF00672 HAMP domain E4O01_11880 PF13361 UvrD-like helicase C-terminal domain E4O01_11880 PF00580 UvrD/REP helicase N-terminal domain E4O01_11880 PF12705 PD-(D/E)XK nuclease superfamily E4O01_11885 PF12705 PD-(D/E)XK nuclease superfamily E4O01_11890 PF02254 TrkA-N domain E4O01_11890 PF02080 TrkA-C domain E4O01_11895 PF02386 Cation transport protein E4O01_11900 PF01841 Transglutaminase-like superfamily E4O01_11915 PF01406 tRNA synthetases class I (C) catalytic domain E4O01_11915 PF09190 DALR domain E4O01_11920 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4O01_11920 PF01565 FAD binding domain E4O01_11930 PF13635 Domain of unknown function (DUF4143) E4O01_11930 PF13173 AAA domain E4O01_11935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O01_11935 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_11955 PF01555 DNA methylase E4O01_11960 PF07676 WD40-like Beta Propeller Repeat E4O01_11960 PF00326 Prolyl oligopeptidase family E4O01_11965 PF00128 Alpha amylase, catalytic domain E4O01_11965 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4O01_11975 PF00266 Aminotransferase class-V E4O01_11980 PF01761 3-dehydroquinate synthase E4O01_11985 PF01048 Phosphorylase superfamily E4O01_11990 PF08011 PD-(D/E)XK nuclease superfamily E4O01_11990 PF09820 Predicted AAA-ATPase E4O01_12005 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O01_12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4O01_12010 PF03466 LysR substrate binding domain E4O01_12020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O01_12025 PF00005 ABC transporter E4O01_12025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_12030 PF00005 ABC transporter E4O01_12030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O01_12035 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_12035 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O01_12040 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_12055 PF00005 ABC transporter E4O01_12060 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_12065 PF00005 ABC transporter E4O01_12065 PF08402 TOBE domain E4O01_12070 PF13439 Glycosyltransferase Family 4 E4O01_12070 PF00534 Glycosyl transferases group 1 E4O01_12085 PF03577 Peptidase family C69 E4O01_12090 PF08245 Mur ligase middle domain E4O01_12090 PF02875 Mur ligase family, glutamate ligase domain E4O01_12130 PF03023 Lipid II flippase MurJ E4O01_12135 PF03616 Sodium/glutamate symporter E4O01_12145 PF02743 Cache domain E4O01_12145 PF00672 HAMP domain E4O01_12145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_12150 PF03477 ATP cone domain E4O01_12150 PF02867 Ribonucleotide reductase, barrel domain E4O01_12150 PF00317 Ribonucleotide reductase, all-alpha domain E4O01_12155 PF00274 Fructose-bisphosphate aldolase class-I E4O01_12165 PF00679 Elongation factor G C-terminus E4O01_12165 PF14492 Elongation Factor G, domain II E4O01_12165 PF03764 Elongation factor G, domain IV E4O01_12165 PF00009 Elongation factor Tu GTP binding domain E4O01_12165 PF03144 Elongation factor Tu domain 2 E4O01_12215 PF02080 TrkA-C domain E4O01_12215 PF02254 TrkA-N domain E4O01_12220 PF03989 DNA gyrase C-terminal domain, beta-propeller E4O01_12220 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O01_12225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4O01_12230 PF01594 AI-2E family transporter E4O01_12235 PF00268 Ribonucleotide reductase, small chain E4O01_12240 PF00672 HAMP domain E4O01_12240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_12240 PF02203 Tar ligand binding domain homologue E4O01_12245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O01_12250 PF08281 Sigma-70, region 4 E4O01_12250 PF04542 Sigma-70 region 2 E4O01_12270 PF01554 MatE E4O01_12275 PF00440 Bacterial regulatory proteins, tetR family E4O01_12285 PF09827 CRISPR associated protein Cas2 E4O01_12290 PF01867 CRISPR associated protein Cas1 E4O01_12295 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 E4O01_12295 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 E4O01_12295 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 E4O01_12295 PF13395 HNH endonuclease E4O01_12305 PF00270 DEAD/DEAH box helicase E4O01_12305 PF00271 Helicase conserved C-terminal domain E4O01_12305 PF00570 HRDC domain E4O01_12305 PF16124 RecQ zinc-binding E4O01_12305 PF09382 RQC domain E4O01_12320 PF01595 Cyclin M transmembrane N-terminal domain E4O01_12320 PF03471 Transporter associated domain E4O01_12320 PF00571 CBS domain E4O01_12325 PF00571 CBS domain E4O01_12325 PF03471 Transporter associated domain E4O01_12325 PF01595 Cyclin M transmembrane N-terminal domain E4O01_12330 PF07726 ATPase family associated with various cellular activities (AAA) E4O01_12330 PF17863 AAA lid domain E4O01_12340 PF02254 TrkA-N domain E4O01_12340 PF02080 TrkA-C domain E4O01_12345 PF02386 Cation transport protein E4O01_12350 PF02511 Thymidylate synthase complementing protein E4O01_12395 PF00005 ABC transporter E4O01_12410 PF01343 Peptidase family S49 E4O01_12415 PF06071 Protein of unknown function (DUF933) E4O01_12415 PF01926 50S ribosome-binding GTPase E4O01_12425 PF02743 Cache domain E4O01_12425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_12425 PF00672 HAMP domain E4O01_12435 PF03781 Sulfatase-modifying factor enzyme 1 E4O01_12470 PF01470 Pyroglutamyl peptidase E4O01_12485 PF00005 ABC transporter E4O01_12485 PF08402 TOBE domain E4O01_12490 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_12510 PF00962 Adenosine/AMP deaminase E4O01_12515 PF01925 Sulfite exporter TauE/SafE E4O01_12520 PF00892 EamA-like transporter family E4O01_12545 PF13651 Adenine-specific methyltransferase EcoRI E4O01_12550 PF13651 Adenine-specific methyltransferase EcoRI E4O01_12560 PF08011 PD-(D/E)XK nuclease superfamily E4O01_12560 PF09820 Predicted AAA-ATPase E4O01_12580 PF00664 ABC transporter transmembrane region E4O01_12580 PF00005 ABC transporter E4O01_12590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O01_12605 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4O01_12615 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O01_12615 PF00069 Protein kinase domain E4O01_12625 PF02595 Glycerate kinase family E4O01_12630 PF05656 Protein of unknown function (DUF805) E4O01_12635 PF03600 Citrate transporter E4O01_12640 PF12557 Cob(I)alamin adenosyltransferase N terminal E4O01_12640 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E4O01_12665 PF07238 PilZ domain E4O01_12705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4O01_12705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4O01_12725 PF02661 Fic/DOC family E4O01_12735 PF01850 PIN domain E4O01_12770 PF02463 RecF/RecN/SMC N terminal domain E4O01_12775 PF02768 DNA polymerase III beta subunit, C-terminal domain E4O01_12775 PF02767 DNA polymerase III beta subunit, central domain E4O01_12775 PF00712 DNA polymerase III beta subunit, N-terminal domain E4O01_12780 PF01661 Macro domain E4O01_12785 PF13784 Fic/DOC family N-terminal E4O01_12785 PF02661 Fic/DOC family E4O01_12800 PF01966 HD domain E4O01_12800 PF00013 KH domain E4O01_12800 PF12072 Domain of unknown function (DUF3552) E4O01_12810 PF02504 Fatty acid synthesis protein E4O01_12815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O01_12820 PF02673 Bacitracin resistance protein BacA E4O01_12825 PF17854 FtsK alpha domain E4O01_12825 PF01580 FtsK/SpoIIIE family E4O01_12825 PF09397 Ftsk gamma domain E4O01_12830 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4O01_12830 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4O01_12830 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4O01_12835 PF00990 Diguanylate cyclase, GGDEF domain E4O01_12840 PF00883 Cytosol aminopeptidase family, catalytic domain E4O01_12840 PF02789 Cytosol aminopeptidase family, N-terminal domain E4O01_12845 PF01066 CDP-alcohol phosphatidyltransferase E4O01_12895 PF02743 Cache domain E4O01_12895 PF00672 HAMP domain E4O01_12895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_12900 PF01048 Phosphorylase superfamily E4O01_12925 PF07837 Formiminotransferase domain, N-terminal subdomain E4O01_12925 PF02971 Formiminotransferase domain E4O01_12930 PF02743 Cache domain E4O01_12930 PF00672 HAMP domain E4O01_12930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_12940 PF01212 Beta-eliminating lyase E4O01_12960 PF00106 short chain dehydrogenase E4O01_12965 PF13411 MerR HTH family regulatory protein E4O01_13010 PF13411 MerR HTH family regulatory protein E4O01_13040 PF00005 ABC transporter E4O01_13040 PF00664 ABC transporter transmembrane region E4O01_13045 PF00664 ABC transporter transmembrane region E4O01_13045 PF00005 ABC transporter E4O01_13050 PF00005 ABC transporter E4O01_13065 PF13476 AAA domain E4O01_13070 PF00149 Calcineurin-like phosphoesterase E4O01_13075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_13075 PF00672 HAMP domain E4O01_13075 PF17202 Single cache domain 3 E4O01_13080 PF07702 UTRA domain E4O01_13080 PF00392 Bacterial regulatory proteins, gntR family E4O01_13085 PF00005 ABC transporter E4O01_13095 PF00005 ABC transporter E4O01_13095 PF00664 ABC transporter transmembrane region E4O01_13100 PF00891 O-methyltransferase domain E4O01_13100 PF16864 Dimerisation domain E4O01_13130 PF00891 O-methyltransferase domain E4O01_13145 PF00005 ABC transporter E4O01_13145 PF00664 ABC transporter transmembrane region E4O01_13155 PF00440 Bacterial regulatory proteins, tetR family E4O01_13155 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O01_13160 PF00375 Sodium:dicarboxylate symporter family E4O01_13170 PF07729 FCD domain E4O01_13170 PF00392 Bacterial regulatory proteins, gntR family E4O01_13175 PF01266 FAD dependent oxidoreductase E4O01_13180 PF00005 ABC transporter E4O01_13180 PF00664 ABC transporter transmembrane region E4O01_13185 PF00005 ABC transporter E4O01_13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_13190 PF04324 BFD-like [2Fe-2S] binding domain E4O01_13200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O01_13200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O01_13265 PF01547 Bacterial extracellular solute-binding protein E4O01_13270 PF00528 Binding-protein-dependent transport system inner membrane component E4O01_13275 PF08402 TOBE domain E4O01_13275 PF00005 ABC transporter E4O01_13280 PF13173 AAA domain E4O01_13280 PF13635 Domain of unknown function (DUF4143) E4O01_13285 PF07687 Peptidase dimerisation domain E4O01_13285 PF01546 Peptidase family M20/M25/M40 E4O01_13290 PF07730 Histidine kinase E4O01_13295 PF00072 Response regulator receiver domain E4O01_13295 PF00196 Bacterial regulatory proteins, luxR family E4O01_13315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O01_13315 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_13320 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O01_13335 PF01081 KDPG and KHG aldolase E4O01_13340 PF01850 PIN domain E4O01_13360 PF00258 Flavodoxin E4O01_13370 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4O01_13370 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4O01_13370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O01_13370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O01_13375 PF00563 EAL domain E4O01_13375 PF00990 Diguanylate cyclase, GGDEF domain E4O01_13375 PF08448 PAS fold E4O01_13390 PF00990 Diguanylate cyclase, GGDEF domain E4O01_13390 PF00072 Response regulator receiver domain E4O01_13405 PF01207 Dihydrouridine synthase (Dus) E4O01_13435 PF03824 High-affinity nickel-transport protein E4O01_13450 PF04468 PSP1 C-terminal conserved region E4O01_13455 PF03885 Protein of unknown function (DUF327) E4O01_13465 PF01551 Peptidase family M23 E4O01_13465 PF04225 Opacity-associated protein A LysM-like domain E4O01_13470 PF01409 tRNA synthetases class II core domain (F) E4O01_13475 PF00128 Alpha amylase, catalytic domain E4O01_13485 PF12683 Protein of unknown function (DUF3798) E4O01_13490 PF00005 ABC transporter E4O01_13510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O01_13510 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O01_13515 PF00175 Oxidoreductase NAD-binding domain E4O01_13515 PF00970 Oxidoreductase FAD-binding domain E4O01_13515 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4O01_13525 PF07720 Tetratricopeptide repeat E4O01_13525 PF01435 Peptidase family M48 E4O01_13530 PF02743 Cache domain E4O01_13530 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O01_13530 PF00672 HAMP domain E4O01_13595 PF00664 ABC transporter transmembrane region E4O01_13595 PF03412 Peptidase C39 family E4O01_13595 PF00005 ABC transporter E4O01_13610 PF02915 Rubrerythrin E4O01_13615 PF00270 DEAD/DEAH box helicase E4O01_13615 PF00271 Helicase conserved C-terminal domain E4O01_13615 PF00570 HRDC domain E4O01_13615 PF16124 RecQ zinc-binding E4O01_13615 PF09382 RQC domain E4O01_13625 PF11967 Recombination protein O N terminal E4O01_13625 PF02565 Recombination protein O C terminal E4O01_13635 PF01702 Queuine tRNA-ribosyltransferase E4O01_13670 PF00005 ABC transporter E4O01_13700 PF03551 Transcriptional regulator PadR-like family E4O01_13710 PF07722 Peptidase C26 E4O01_13715 PF13520 Amino acid permease E4O01_13730 PF01791 DeoC/LacD family aldolase E4O01_13735 PF00210 Ferritin-like domain E4O01_13740 PF07687 Peptidase dimerisation domain E4O01_13740 PF01546 Peptidase family M20/M25/M40 E4O01_13760 PF01979 Amidohydrolase family E4O01_13770 PF01313 Bacterial export proteins, family 3 E4O01_13775 PF01311 Bacterial export proteins, family 1 E4O01_13780 PF01312 FlhB HrpN YscU SpaS Family E4O01_13785 PF00771 FHIPEP family E4O01_13790 PF00005 ABC transporter E4O01_13795 PF00005 ABC transporter E4O01_13800 PF01192 RNA polymerase Rpb6 E4O01_13815 PF00872 Transposase, Mutator family E4O01_13860 PF00365 Phosphofructokinase E4O01_13875 PF00027 Cyclic nucleotide-binding domain E4O01_13875 PF13545 Crp-like helix-turn-helix domain E4O01_13880 PF09028 Mac 1 E4O01_13890 PF01546 Peptidase family M20/M25/M40 E4O01_13890 PF07687 Peptidase dimerisation domain E4O01_13900 PF03979 Sigma-70 factor, region 1.1 E4O01_13900 PF00140 Sigma-70 factor, region 1.2 E4O01_13900 PF04542 Sigma-70 region 2 E4O01_13900 PF04539 Sigma-70 region 3 E4O01_13900 PF04545 Sigma-70, region 4 E4O01_13905 PF01136 Peptidase family U32 E4O01_13905 PF16325 Peptidase family U32 C-terminal domain E4O01_13925 PF01926 50S ribosome-binding GTPase E4O01_13925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4O01_13930 PF00391 PEP-utilising enzyme, mobile domain E4O01_13930 PF02896 PEP-utilising enzyme, TIM barrel domain E4O01_13930 PF05524 PEP-utilising enzyme, N-terminal E4O01_13955 PF00665 Integrase core domain E4O01_13955 PF13333 Integrase core domain E4O01_13955 PF13276 HTH-like domain E4O01_14065 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4O01_14070 PF00005 ABC transporter E4O01_14085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_14085 PF00672 HAMP domain E4O01_14085 PF02743 Cache domain E4O01_14105 PF09820 Predicted AAA-ATPase E4O01_14105 PF08011 PD-(D/E)XK nuclease superfamily E4O01_14110 PF03063 Prismane/CO dehydrogenase family E4O01_14125 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O01_14130 PF02687 FtsX-like permease family E4O01_14130 PF00005 ABC transporter E4O01_14130 PF12704 MacB-like periplasmic core domain E4O01_14165 PF00004 ATPase family associated with various cellular activities (AAA) E4O01_14165 PF17862 AAA+ lid domain E4O01_14165 PF01434 Peptidase family M41 E4O01_14195 PF01048 Phosphorylase superfamily E4O01_14205 PF00672 HAMP domain E4O01_14205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_14205 PF02743 Cache domain E4O01_14220 PF01680 SOR/SNZ family E4O01_14225 PF10509 Galactokinase galactose-binding signature E4O01_14225 PF08544 GHMP kinases C terminal E4O01_14225 PF00288 GHMP kinases N terminal domain E4O01_14230 PF01171 PP-loop family E4O01_14255 PF12419 SNF2 Helicase protein E4O01_14255 PF00271 Helicase conserved C-terminal domain E4O01_14255 PF00176 SNF2 family N-terminal domain E4O01_14265 PF00403 Heavy-metal-associated domain E4O01_14275 PF00293 NUDIX domain E4O01_14280 PF00210 Ferritin-like domain E4O01_14285 PF00578 AhpC/TSA family E4O01_14285 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4O01_14290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4O01_14290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4O01_14305 PF16193 AAA C-terminal domain E4O01_14305 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O01_14305 PF12002 MgsA AAA+ ATPase C terminal E4O01_14310 PF05343 M42 glutamyl aminopeptidase E4O01_14320 PF01268 Formate--tetrahydrofolate ligase E4O01_14325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O01_14325 PF03129 Anticodon binding domain E4O01_14345 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4O01_14345 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O01_14370 PF00005 ABC transporter E4O01_14375 PF00005 ABC transporter E4O01_14385 PF00072 Response regulator receiver domain E4O01_14385 PF04397 LytTr DNA-binding domain E4O01_14400 PF01230 HIT domain E4O01_14420 PF00109 Beta-ketoacyl synthase, N-terminal domain E4O01_14420 PF02801 Beta-ketoacyl synthase, C-terminal domain E4O01_14430 PF00501 AMP-binding enzyme E4O01_14430 PF13193 AMP-binding enzyme C-terminal domain E4O01_14435 PF03099 Biotin/lipoate A/B protein ligase family E4O01_14435 PF02237 Biotin protein ligase C terminal domain E4O01_14435 PF08279 HTH domain E4O01_14440 PF01515 Phosphate acetyl/butaryl transferase E4O01_14445 PF13174 Tetratricopeptide repeat E4O01_14445 PF13176 Tetratricopeptide repeat E4O01_14450 PF03960 ArsC family E4O01_14455 PF00005 ABC transporter E4O01_14455 PF12848 ABC transporter E4O01_14465 PF00672 HAMP domain E4O01_14465 PF02743 Cache domain E4O01_14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O01_14475 PF00005 ABC transporter E4O01_14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O01_14490 PF00204 DNA gyrase B E4O01_14490 PF00986 DNA gyrase B subunit, carboxyl terminus E4O01_14490 PF01751 Toprim domain