locus-tag class description E4O02_00005 PF00308 Bacterial dnaA protein E4O02_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4O02_00005 PF11638 DnaA N-terminal domain E4O02_00025 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4O02_00025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4O02_00025 PF14579 Helix-hairpin-helix motif E4O02_00025 PF02811 PHP domain E4O02_00035 PF17239 Family of unknown function (DUF5312) E4O02_00050 PF00664 ABC transporter transmembrane region E4O02_00050 PF00005 ABC transporter E4O02_00065 PF00664 ABC transporter transmembrane region E4O02_00065 PF00005 ABC transporter E4O02_00085 PF00561 alpha/beta hydrolase fold E4O02_00120 PF07687 Peptidase dimerisation domain E4O02_00120 PF01546 Peptidase family M20/M25/M40 E4O02_00125 PF00072 Response regulator receiver domain E4O02_00125 PF00486 Transcriptional regulatory protein, C terminal E4O02_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_00135 PF00005 ABC transporter E4O02_00180 PF08279 HTH domain E4O02_00180 PF13280 WYL domain E4O02_00195 PF00691 OmpA family E4O02_00200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O02_00200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O02_00200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O02_00200 PF10371 Domain of unknown function E4O02_00200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O02_00225 PF06418 CTP synthase N-terminus E4O02_00225 PF00117 Glutamine amidotransferase class-I E4O02_00235 PF00155 Aminotransferase class I and II E4O02_00240 PF00448 SRP54-type protein, GTPase domain E4O02_00245 PF10609 NUBPL iron-transfer P-loop NTPase E4O02_00255 PF04542 Sigma-70 region 2 E4O02_00255 PF04545 Sigma-70, region 4 E4O02_00255 PF04539 Sigma-70 region 3 E4O02_00285 PF14821 Threonine synthase N terminus E4O02_00285 PF00291 Pyridoxal-phosphate dependent enzyme E4O02_00315 PF00953 Glycosyl transferase family 4 E4O02_00320 PF01066 CDP-alcohol phosphatidyltransferase E4O02_00325 PF00464 Serine hydroxymethyltransferase E4O02_00340 PF00571 CBS domain E4O02_00340 PF00478 IMP dehydrogenase / GMP reductase domain E4O02_00345 PF00133 tRNA synthetases class I (I, L, M and V) E4O02_00345 PF08264 Anticodon-binding domain of tRNA E4O02_00365 PF11849 Domain of unknown function (DUF3369) E4O02_00370 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O02_00375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O02_00380 PF06180 Cobalt chelatase (CbiK) E4O02_00395 PF00392 Bacterial regulatory proteins, gntR family E4O02_00395 PF07702 UTRA domain E4O02_00400 PF00005 ABC transporter E4O02_00425 PF00005 ABC transporter E4O02_00425 PF00664 ABC transporter transmembrane region E4O02_00430 PF00571 CBS domain E4O02_00430 PF00005 ABC transporter E4O02_00440 PF04324 BFD-like [2Fe-2S] binding domain E4O02_00440 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_00445 PF01266 FAD dependent oxidoreductase E4O02_00455 PF12728 Helix-turn-helix domain E4O02_00455 PF02661 Fic/DOC family E4O02_00465 PF01432 Peptidase family M3 E4O02_00465 PF08439 Oligopeptidase F E4O02_00485 PF01641 SelR domain E4O02_00485 PF01625 Peptide methionine sulfoxide reductase E4O02_00505 PF02719 Polysaccharide biosynthesis protein E4O02_00530 PF00595 PDZ domain E4O02_00540 PF03412 Peptidase C39 family E4O02_00540 PF00005 ABC transporter E4O02_00540 PF00664 ABC transporter transmembrane region E4O02_00545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4O02_00570 PF03572 Peptidase family S41 E4O02_00570 PF01471 Putative peptidoglycan binding domain E4O02_00570 PF17820 PDZ domain E4O02_00580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O02_00590 PF01799 [2Fe-2S] binding domain E4O02_00590 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O02_00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_00630 PF00085 Thioredoxin E4O02_00640 PF00005 ABC transporter E4O02_00645 PF01032 FecCD transport family E4O02_00660 PF17863 AAA lid domain E4O02_00660 PF01078 Magnesium chelatase, subunit ChlI E4O02_00660 PF13519 von Willebrand factor type A domain E4O02_00665 PF01078 Magnesium chelatase, subunit ChlI E4O02_00665 PF17863 AAA lid domain E4O02_00670 PF02384 N-6 DNA Methylase E4O02_00690 PF01420 Type I restriction modification DNA specificity domain E4O02_00695 PF02899 Phage integrase, N-terminal SAM-like domain E4O02_00695 PF00589 Phage integrase family E4O02_00720 PF11867 Domain of unknown function (DUF3387) E4O02_00720 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4O02_00720 PF18766 SWI2/SNF2 ATPase E4O02_00725 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4O02_00730 PF03553 Na+/H+ antiporter family E4O02_00735 PF00005 ABC transporter E4O02_00740 PF01032 FecCD transport family E4O02_00760 PF00082 Subtilase family E4O02_00760 PF05922 Peptidase inhibitor I9 E4O02_00765 PF03144 Elongation factor Tu domain 2 E4O02_00765 PF00009 Elongation factor Tu GTP binding domain E4O02_00765 PF03143 Elongation factor Tu C-terminal domain E4O02_00770 PF00338 Ribosomal protein S10p/S20e E4O02_00775 PF00297 Ribosomal protein L3 E4O02_00780 PF00573 Ribosomal protein L4/L1 family E4O02_00785 PF00276 Ribosomal protein L23 E4O02_00790 PF00181 Ribosomal Proteins L2, RNA binding domain E4O02_00790 PF03947 Ribosomal Proteins L2, C-terminal domain E4O02_00795 PF00203 Ribosomal protein S19 E4O02_00800 PF00237 Ribosomal protein L22p/L17e E4O02_00805 PF00189 Ribosomal protein S3, C-terminal domain E4O02_00805 PF07650 KH domain E4O02_00810 PF00252 Ribosomal protein L16p/L10e E4O02_00815 PF00831 Ribosomal L29 protein E4O02_00820 PF00366 Ribosomal protein S17 E4O02_00825 PF00238 Ribosomal protein L14p/L23e E4O02_00830 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4O02_00830 PF00467 KOW motif E4O02_00835 PF00673 ribosomal L5P family C-terminus E4O02_00835 PF00281 Ribosomal protein L5 E4O02_00840 PF00253 Ribosomal protein S14p/S29e E4O02_00845 PF00410 Ribosomal protein S8 E4O02_00850 PF00347 Ribosomal protein L6 E4O02_00855 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4O02_00860 PF00333 Ribosomal protein S5, N-terminal domain E4O02_00860 PF03719 Ribosomal protein S5, C-terminal domain E4O02_00865 PF00327 Ribosomal protein L30p/L7e E4O02_00870 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4O02_00875 PF00344 SecY translocase E4O02_00880 PF00444 Ribosomal protein L36 E4O02_00885 PF00416 Ribosomal protein S13/S18 E4O02_00890 PF00411 Ribosomal protein S11 E4O02_00895 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4O02_00895 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4O02_00895 PF01000 RNA polymerase Rpb3/RpoA insert domain E4O02_00900 PF01196 Ribosomal protein L17 E4O02_00920 PF00708 Acylphosphatase E4O02_00940 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O02_00960 PF13649 Methyltransferase domain E4O02_00965 PF02082 Transcriptional regulator E4O02_00970 PF13460 NAD(P)H-binding E4O02_00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_00990 PF00672 HAMP domain E4O02_01010 PF03852 DNA mismatch endonuclease Vsr E4O02_01015 PF00145 C-5 cytosine-specific DNA methylase E4O02_01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_01025 PF00072 Response regulator receiver domain E4O02_01085 PF00005 ABC transporter E4O02_01100 PF01022 Bacterial regulatory protein, arsR family E4O02_01105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_01105 PF00672 HAMP domain E4O02_01105 PF02743 Cache domain E4O02_01115 PF11855 Protein of unknown function (DUF3375) E4O02_01135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_01135 PF17202 Single cache domain 3 E4O02_01135 PF00672 HAMP domain E4O02_01150 PF02311 AraC-like ligand binding domain E4O02_01150 PF12833 Helix-turn-helix domain E4O02_01155 PF00664 ABC transporter transmembrane region E4O02_01155 PF00005 ABC transporter E4O02_01155 PF03412 Peptidase C39 family E4O02_01160 PF00005 ABC transporter E4O02_01160 PF00664 ABC transporter transmembrane region E4O02_01170 PF02678 Pirin E4O02_01170 PF05726 Pirin C-terminal cupin domain E4O02_01190 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_01200 PF01613 Flavin reductase like domain E4O02_01205 PF01638 HxlR-like helix-turn-helix E4O02_01215 PF00664 ABC transporter transmembrane region E4O02_01215 PF00005 ABC transporter E4O02_01220 PF00664 ABC transporter transmembrane region E4O02_01220 PF00005 ABC transporter E4O02_01225 PF00005 ABC transporter E4O02_01240 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O02_01240 PF00440 Bacterial regulatory proteins, tetR family E4O02_01245 PF07977 FabA-like domain E4O02_01250 PF01225 Mur ligase family, catalytic domain E4O02_01250 PF02875 Mur ligase family, glutamate ligase domain E4O02_01250 PF08245 Mur ligase middle domain E4O02_01255 PF01430 Hsp33 protein E4O02_01260 PF02570 Precorrin-8X methylmutase E4O02_01270 PF00664 ABC transporter transmembrane region E4O02_01270 PF00005 ABC transporter E4O02_01275 PF00005 ABC transporter E4O02_01275 PF00664 ABC transporter transmembrane region E4O02_01285 PF00005 ABC transporter E4O02_01290 PF00950 ABC 3 transport family E4O02_01320 PF02568 Thiamine biosynthesis protein (ThiI) E4O02_01320 PF02926 THUMP domain E4O02_01325 PF00793 DAHP synthetase I family E4O02_01330 PF02229 Transcriptional Coactivator p15 (PC4) E4O02_01335 PF01066 CDP-alcohol phosphatidyltransferase E4O02_01340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O02_01340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O02_01355 PF02508 Rnf-Nqr subunit, membrane protein E4O02_01360 PF02508 Rnf-Nqr subunit, membrane protein E4O02_01365 PF04205 FMN-binding domain E4O02_01370 PF03116 NQR2, RnfD, RnfE family E4O02_01375 PF10531 SLBB domain E4O02_01375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O02_01375 PF13375 RnfC Barrel sandwich hybrid domain E4O02_01375 PF13237 4Fe-4S dicluster domain E4O02_01385 PF13519 von Willebrand factor type A domain E4O02_01405 PF16314 Domain of unknown function (DUF4954) E4O02_01420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_01420 PF00672 HAMP domain E4O02_01420 PF02743 Cache domain E4O02_01435 PF00572 Ribosomal protein L13 E4O02_01440 PF00380 Ribosomal protein S9/S16 E4O02_01445 PF02631 RecX family E4O02_01450 PF00072 Response regulator receiver domain E4O02_01450 PF00486 Transcriptional regulatory protein, C terminal E4O02_01475 PF00849 RNA pseudouridylate synthase E4O02_01475 PF01479 S4 domain E4O02_01490 PF01921 tRNA synthetases class I (K) E4O02_01495 PF00005 ABC transporter E4O02_01495 PF00664 ABC transporter transmembrane region E4O02_01500 PF00664 ABC transporter transmembrane region E4O02_01500 PF00005 ABC transporter E4O02_01520 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O02_01525 PF01134 Glucose inhibited division protein A E4O02_01525 PF13932 GidA associated domain E4O02_01550 PF01973 Protein of unknown function DUF115 E4O02_01560 PF00005 ABC transporter E4O02_01565 PF00005 ABC transporter E4O02_01565 PF00664 ABC transporter transmembrane region E4O02_01585 PF09820 Predicted AAA-ATPase E4O02_01585 PF08011 PD-(D/E)XK nuclease superfamily E4O02_01590 PF18073 Rubredoxin metal binding domain E4O02_01590 PF06745 KaiC E4O02_01600 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4O02_01605 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_01615 PF02527 rRNA small subunit methyltransferase G E4O02_01620 PF00171 Aldehyde dehydrogenase family E4O02_01640 PF00814 Glycoprotease family E4O02_01650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4O02_01650 PF00672 HAMP domain E4O02_01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_01650 PF00512 His Kinase A (phospho-acceptor) domain E4O02_01650 PF01627 Hpt domain E4O02_01650 PF00072 Response regulator receiver domain E4O02_01655 PF00486 Transcriptional regulatory protein, C terminal E4O02_01655 PF00072 Response regulator receiver domain E4O02_01665 PF08241 Methyltransferase domain E4O02_01685 PF03167 Uracil DNA glycosylase superfamily E4O02_01690 PF18074 Primosomal protein N C-terminal domain E4O02_01690 PF00270 DEAD/DEAH box helicase E4O02_01690 PF00271 Helicase conserved C-terminal domain E4O02_01690 PF17764 3′ DNA-binding domain (3′BD) E4O02_01690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4O02_01710 PF09820 Predicted AAA-ATPase E4O02_01710 PF08011 PD-(D/E)XK nuclease superfamily E4O02_01715 PF03462 PCRF domain E4O02_01715 PF00472 RF-1 domain E4O02_01720 PF05175 Methyltransferase small domain E4O02_01720 PF02390 Putative methyltransferase E4O02_01720 PF17827 PrmC N-terminal domain E4O02_01730 PF09820 Predicted AAA-ATPase E4O02_01730 PF08011 PD-(D/E)XK nuclease superfamily E4O02_01745 PF13537 Glutamine amidotransferase domain E4O02_01745 PF00156 Phosphoribosyl transferase domain E4O02_01775 PF04963 Sigma-54 factor, core binding domain E4O02_01775 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4O02_01775 PF04552 Sigma-54, DNA binding domain E4O02_01780 PF00753 Metallo-beta-lactamase superfamily E4O02_01790 PF01370 NAD dependent epimerase/dehydratase family E4O02_01795 PF00468 Ribosomal protein L34 E4O02_01800 PF00825 Ribonuclease P E4O02_01805 PF01809 Putative membrane protein insertion efficiency factor E4O02_01810 PF02096 60Kd inner membrane protein E4O02_01810 PF14849 YidC periplasmic domain E4O02_01815 PF01424 R3H domain E4O02_01815 PF14804 Jag N-terminus E4O02_01825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4O02_01835 PF03186 CobD/Cbib protein E4O02_01840 PF00574 Clp protease E4O02_01845 PF02446 4-alpha-glucanotransferase E4O02_01850 PF01820 D-ala D-ala ligase N-terminus E4O02_01850 PF07478 D-ala D-ala ligase C-terminus E4O02_01860 PF02654 Cobalamin-5-phosphate synthase E4O02_01870 PF07730 Histidine kinase E4O02_01885 PF00005 ABC transporter E4O02_01900 PF05175 Methyltransferase small domain E4O02_01905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O02_01910 PF08534 Redoxin E4O02_01915 PF04205 FMN-binding domain E4O02_01915 PF12801 4Fe-4S binding domain E4O02_01925 PF00578 AhpC/TSA family E4O02_01935 PF03553 Na+/H+ antiporter family E4O02_01940 PF07969 Amidohydrolase family E4O02_01955 PF02733 Dak1 domain E4O02_01960 PF02733 Dak1 domain E4O02_01960 PF02734 DAK2 domain E4O02_01970 PF07969 Amidohydrolase family E4O02_01980 PF01032 FecCD transport family E4O02_01995 PF02599 Global regulator protein family E4O02_02000 PF02623 FliW protein E4O02_02005 PF00669 Bacterial flagellin N-terminal helical region E4O02_02005 PF07196 Flagellin hook IN motif E4O02_02005 PF00700 Bacterial flagellin C-terminal helical region E4O02_02010 PF07196 Flagellin hook IN motif E4O02_02010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O02_02030 PF02545 Maf-like protein E4O02_02035 PF00318 Ribosomal protein S2 E4O02_02040 PF00889 Elongation factor TS E4O02_02045 PF01765 Ribosome recycling factor E4O02_02050 PF01255 Putative undecaprenyl diphosphate synthase E4O02_02060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4O02_02060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4O02_02060 PF13288 DXP reductoisomerase C-terminal domain E4O02_02065 PF17820 PDZ domain E4O02_02065 PF02163 Peptidase family M50 E4O02_02075 PF00133 tRNA synthetases class I (I, L, M and V) E4O02_02075 PF13603 Leucyl-tRNA synthetase, Domain 2 E4O02_02075 PF09334 tRNA synthetases class I (M) E4O02_02075 PF08264 Anticodon-binding domain of tRNA E4O02_02080 PF02743 Cache domain E4O02_02080 PF00672 HAMP domain E4O02_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_02090 PF17755 UvrA DNA-binding domain E4O02_02090 PF00005 ABC transporter E4O02_02090 PF17760 UvrA interaction domain E4O02_02100 PF17674 HHH domain E4O02_02100 PF16921 Tex protein YqgF-like domain E4O02_02100 PF09371 Tex-like protein N-terminal domain E4O02_02100 PF00575 S1 RNA binding domain E4O02_02105 PF01814 Hemerythrin HHE cation binding domain E4O02_02115 PF13654 AAA domain E4O02_02115 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O02_02120 PF02601 Exonuclease VII, large subunit E4O02_02120 PF13742 OB-fold nucleic acid binding domain E4O02_02130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4O02_02130 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E4O02_02140 PF16811 TRAP transporter T-component E4O02_02150 PF02310 B12 binding domain E4O02_02155 PF13941 MutL protein E4O02_02160 PF01783 Ribosomal L32p protein family E4O02_02165 PF00550 Phosphopantetheine attachment site E4O02_02170 PF00035 Double-stranded RNA binding motif E4O02_02170 PF14622 Ribonuclease-III-like E4O02_02175 PF00011 Hsp20/alpha crystallin family E4O02_02185 PF01743 Poly A polymerase head domain E4O02_02185 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O02_02185 PF13735 tRNA nucleotidyltransferase domain 2 putative E4O02_02190 PF01544 CorA-like Mg2+ transporter protein E4O02_02195 PF02719 Polysaccharide biosynthesis protein E4O02_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_02205 PF01687 Riboflavin kinase E4O02_02205 PF06574 FAD synthetase E4O02_02210 PF00312 Ribosomal protein S15 E4O02_02215 PF00575 S1 RNA binding domain E4O02_02215 PF03725 3' exoribonuclease family, domain 2 E4O02_02215 PF01138 3' exoribonuclease family, domain 1 E4O02_02215 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4O02_02215 PF00013 KH domain E4O02_02220 PF00692 dUTPase E4O02_02235 PF06368 Methylaspartate mutase E chain (MutE) E4O02_02240 PF05034 Methylaspartate ammonia-lyase N-terminus E4O02_02240 PF07476 Methylaspartate ammonia-lyase C-terminus E4O02_02245 PF01497 Periplasmic binding protein E4O02_02250 PF01032 FecCD transport family E4O02_02255 PF00005 ABC transporter E4O02_02260 PF07687 Peptidase dimerisation domain E4O02_02260 PF01546 Peptidase family M20/M25/M40 E4O02_02270 PF01297 Zinc-uptake complex component A periplasmic E4O02_02290 PF04073 Aminoacyl-tRNA editing domain E4O02_02290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O02_02290 PF03129 Anticodon binding domain E4O02_02300 PF10502 Signal peptidase, peptidase S26 E4O02_02310 PF13407 Periplasmic binding protein domain E4O02_02310 PF18610 Periplasmic binding protein domain E4O02_02315 PF00005 ABC transporter E4O02_02320 PF02653 Branched-chain amino acid transport system / permease component E4O02_02325 PF13847 Methyltransferase domain E4O02_02340 PF10509 Galactokinase galactose-binding signature E4O02_02340 PF08544 GHMP kinases C terminal E4O02_02340 PF00288 GHMP kinases N terminal domain E4O02_02350 PF01784 NIF3 (NGG1p interacting factor 3) E4O02_02365 PF03553 Na+/H+ antiporter family E4O02_02365 PF13726 Na+-H+ antiporter family E4O02_02370 PF03553 Na+/H+ antiporter family E4O02_02375 PF00892 EamA-like transporter family E4O02_02385 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O02_02390 PF01177 Asp/Glu/Hydantoin racemase E4O02_02395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O02_02395 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O02_02395 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O02_02395 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O02_02395 PF10371 Domain of unknown function E4O02_02400 PF00849 RNA pseudouridylate synthase E4O02_02400 PF01479 S4 domain E4O02_02405 PF00155 Aminotransferase class I and II E4O02_02415 PF00291 Pyridoxal-phosphate dependent enzyme E4O02_02415 PF14821 Threonine synthase N terminus E4O02_02420 PF02885 Glycosyl transferase family, helical bundle domain E4O02_02420 PF00591 Glycosyl transferase family, a/b domain E4O02_02420 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4O02_02425 PF02272 DHHA1 domain E4O02_02425 PF17768 RecJ OB domain E4O02_02425 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4O02_02425 PF01368 DHH family E4O02_02430 PF01476 LysM domain E4O02_02430 PF08525 Opacity-associated protein A N-terminal motif E4O02_02430 PF01551 Peptidase family M23 E4O02_02440 PF02195 ParB-like nuclease domain E4O02_02440 PF17762 HTH domain found in ParB protein E4O02_02445 PF00501 AMP-binding enzyme E4O02_02460 PF14353 CpXC protein E4O02_02470 PF01569 PAP2 superfamily E4O02_02475 PF01926 50S ribosome-binding GTPase E4O02_02475 PF10396 GTP-binding protein TrmE N-terminus E4O02_02475 PF12631 MnmE helical domain E4O02_02480 PF09820 Predicted AAA-ATPase E4O02_02480 PF08011 PD-(D/E)XK nuclease superfamily E4O02_02485 PF00654 Voltage gated chloride channel E4O02_02515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O02_02515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4O02_02515 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_02525 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O02_02535 PF04298 Putative neutral zinc metallopeptidase E4O02_02540 PF02743 Cache domain E4O02_02540 PF00672 HAMP domain E4O02_02540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_02545 PF01189 16S rRNA methyltransferase RsmB/F E4O02_02545 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4O02_02545 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4O02_02550 PF13302 Acetyltransferase (GNAT) domain E4O02_02555 PF08011 PD-(D/E)XK nuclease superfamily E4O02_02555 PF09820 Predicted AAA-ATPase E4O02_02565 PF00005 ABC transporter E4O02_02600 PF05198 Translation initiation factor IF-3, N-terminal domain E4O02_02600 PF00707 Translation initiation factor IF-3, C-terminal domain E4O02_02605 PF01632 Ribosomal protein L35 E4O02_02610 PF00453 Ribosomal protein L20 E4O02_02620 PF05164 Cell division protein ZapA E4O02_02625 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4O02_02635 PF01476 LysM domain E4O02_02635 PF01464 Transglycosylase SLT domain E4O02_02655 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_02660 PF03313 Serine dehydratase alpha chain E4O02_02665 PF06832 Penicillin-Binding Protein C-terminus Family E4O02_02665 PF00912 Transglycosylase E4O02_02665 PF00905 Penicillin binding protein transpeptidase domain E4O02_02670 PF00326 Prolyl oligopeptidase family E4O02_02670 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O02_02695 PF05525 Branched-chain amino acid transport protein E4O02_02710 PF00919 Uncharacterized protein family UPF0004 E4O02_02710 PF04055 Radical SAM superfamily E4O02_02735 PF00232 Glycosyl hydrolase family 1 E4O02_02750 PF12848 ABC transporter E4O02_02750 PF00005 ABC transporter E4O02_02760 PF01471 Putative peptidoglycan binding domain E4O02_02760 PF03572 Peptidase family S41 E4O02_02760 PF13180 PDZ domain E4O02_02765 PF04452 RNA methyltransferase E4O02_02780 PF02517 CPBP intramembrane metalloprotease E4O02_02785 PF02517 CPBP intramembrane metalloprotease E4O02_02825 PF00005 ABC transporter E4O02_02825 PF00664 ABC transporter transmembrane region E4O02_02825 PF03412 Peptidase C39 family E4O02_02830 PF00675 Insulinase (Peptidase family M16) E4O02_02830 PF05193 Peptidase M16 inactive domain E4O02_02830 PF08367 Peptidase M16C associated E4O02_02835 PF02075 Crossover junction endodeoxyribonuclease RuvC E4O02_02840 PF01330 RuvA N terminal domain E4O02_02870 PF13726 Na+-H+ antiporter family E4O02_02870 PF03553 Na+/H+ antiporter family E4O02_02890 PF00005 ABC transporter E4O02_02925 PF00005 ABC transporter E4O02_02930 PF01891 Cobalt uptake substrate-specific transmembrane region E4O02_02955 PF05598 Transposase domain (DUF772) E4O02_02955 PF01609 Transposase DDE domain E4O02_02970 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4O02_02975 PF02861 Clp amino terminal domain, pathogenicity island component E4O02_02975 PF17871 AAA lid domain E4O02_02975 PF07724 AAA domain (Cdc48 subfamily) E4O02_02975 PF00004 ATPase family associated with various cellular activities (AAA) E4O02_02975 PF10431 C-terminal, D2-small domain, of ClpB protein E4O02_02980 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4O02_02990 PF02677 Epoxyqueuosine reductase QueH E4O02_02995 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4O02_03015 PF00005 ABC transporter E4O02_03015 PF00664 ABC transporter transmembrane region E4O02_03020 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O02_03025 PF03687 Uncharacterised protein family (UPF0164) E4O02_03035 PF07228 Stage II sporulation protein E (SpoIIE) E4O02_03035 PF00672 HAMP domain E4O02_03040 PF00005 ABC transporter E4O02_03040 PF13732 Domain of unknown function (DUF4162) E4O02_03060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4O02_03080 PF00270 DEAD/DEAH box helicase E4O02_03080 PF00271 Helicase conserved C-terminal domain E4O02_03090 PF01979 Amidohydrolase family E4O02_03140 PF00144 Beta-lactamase E4O02_03150 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O02_03155 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O02_03160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4O02_03160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4O02_03165 PF02881 SRP54-type protein, helical bundle domain E4O02_03165 PF00448 SRP54-type protein, GTPase domain E4O02_03165 PF02978 Signal peptide binding domain E4O02_03170 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4O02_03175 PF01176 Translation initiation factor 1A / IF-1 E4O02_03180 PF01556 DnaJ C terminal domain E4O02_03180 PF00684 DnaJ central domain E4O02_03180 PF00226 DnaJ domain E4O02_03185 PF00696 Amino acid kinase family E4O02_03190 PF00588 SpoU rRNA Methylase family E4O02_03205 PF00575 S1 RNA binding domain E4O02_03210 PF00072 Response regulator receiver domain E4O02_03210 PF00158 Sigma-54 interaction domain E4O02_03210 PF02954 Bacterial regulatory protein, Fis family E4O02_03230 PF00563 EAL domain E4O02_03230 PF03707 Bacterial signalling protein N terminal repeat E4O02_03230 PF00990 Diguanylate cyclase, GGDEF domain E4O02_03235 PF04055 Radical SAM superfamily E4O02_03260 PF01042 Endoribonuclease L-PSP E4O02_03265 PF08676 MutL C terminal dimerisation domain E4O02_03265 PF01119 DNA mismatch repair protein, C-terminal domain E4O02_03270 PF02609 Exonuclease VII small subunit E4O02_03275 PF00005 ABC transporter E4O02_03280 PF00005 ABC transporter E4O02_03290 PF04023 FeoA domain E4O02_03295 PF07670 Nucleoside recognition E4O02_03295 PF17910 FeoB cytosolic helical domain E4O02_03295 PF07664 Ferrous iron transport protein B C terminus E4O02_03295 PF04023 FeoA domain E4O02_03295 PF02421 Ferrous iron transport protein B E4O02_03370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O02_03420 PF02151 UvrB/uvrC motif E4O02_03440 PF13439 Glycosyltransferase Family 4 E4O02_03440 PF00534 Glycosyl transferases group 1 E4O02_03530 PF03462 PCRF domain E4O02_03530 PF00472 RF-1 domain E4O02_03575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4O02_03580 PF02861 Clp amino terminal domain, pathogenicity island component E4O02_03580 PF10431 C-terminal, D2-small domain, of ClpB protein E4O02_03580 PF00004 ATPase family associated with various cellular activities (AAA) E4O02_03580 PF07724 AAA domain (Cdc48 subfamily) E4O02_03580 PF17871 AAA lid domain E4O02_03585 PF00483 Nucleotidyl transferase E4O02_03590 PF13439 Glycosyltransferase Family 4 E4O02_03590 PF00534 Glycosyl transferases group 1 E4O02_03600 PF03330 Lytic transglycolase E4O02_03610 PF01026 TatD related DNase E4O02_03615 PF00691 OmpA family E4O02_03710 PF05598 Transposase domain (DUF772) E4O02_03710 PF01609 Transposase DDE domain E4O02_03735 PF01546 Peptidase family M20/M25/M40 E4O02_03735 PF07687 Peptidase dimerisation domain E4O02_03745 PF03606 C4-dicarboxylate anaerobic carrier E4O02_03770 PF00440 Bacterial regulatory proteins, tetR family E4O02_03780 PF08439 Oligopeptidase F E4O02_03780 PF01432 Peptidase family M3 E4O02_03785 PF00929 Exonuclease E4O02_03790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O02_03790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O02_03790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O02_03790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O02_03795 PF01078 Magnesium chelatase, subunit ChlI E4O02_03795 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4O02_03800 PF00206 Lyase E4O02_03800 PF10415 Fumarase C C-terminus E4O02_03805 PF13488 Glycine zipper E4O02_03805 PF00691 OmpA family E4O02_03810 PF05872 Bacterial protein of unknown function (DUF853) E4O02_03820 PF00905 Penicillin binding protein transpeptidase domain E4O02_03820 PF03717 Penicillin-binding Protein dimerisation domain E4O02_03830 PF02517 CPBP intramembrane metalloprotease E4O02_03850 PF09186 Domain of unknown function (DUF1949) E4O02_03850 PF01205 Uncharacterized protein family UPF0029 E4O02_03875 PF03477 ATP cone domain E4O02_03885 PF01145 SPFH domain / Band 7 family E4O02_03890 PF01145 SPFH domain / Band 7 family E4O02_03900 PF03062 MBOAT, membrane-bound O-acyltransferase family E4O02_03910 PF08544 GHMP kinases C terminal E4O02_03910 PF00288 GHMP kinases N terminal domain E4O02_03915 PF04026 SpoVG E4O02_03925 PF14693 Ribosomal protein TL5, C-terminal domain E4O02_03925 PF01386 Ribosomal L25p family E4O02_03930 PF01171 PP-loop family E4O02_03940 PF17820 PDZ domain E4O02_03940 PF13180 PDZ domain E4O02_03955 PF01807 CHC2 zinc finger E4O02_03955 PF08275 DNA primase catalytic core, N-terminal domain E4O02_03960 PF04545 Sigma-70, region 4 E4O02_03960 PF00140 Sigma-70 factor, region 1.2 E4O02_03960 PF03979 Sigma-70 factor, region 1.1 E4O02_03960 PF04539 Sigma-70 region 3 E4O02_03960 PF04542 Sigma-70 region 2 E4O02_03995 PF03717 Penicillin-binding Protein dimerisation domain E4O02_03995 PF00905 Penicillin binding protein transpeptidase domain E4O02_04000 PF01098 Cell cycle protein E4O02_04025 PF01263 Aldose 1-epimerase E4O02_04035 PF00860 Permease family E4O02_04040 PF13495 Phage integrase, N-terminal SAM-like domain E4O02_04040 PF00589 Phage integrase family E4O02_04060 PF01177 Asp/Glu/Hydantoin racemase E4O02_04125 PF14338 Mrr N-terminal domain E4O02_04125 PF04471 Restriction endonuclease E4O02_04165 PF01850 PIN domain E4O02_04270 PF01554 MatE E4O02_04330 PF00145 C-5 cytosine-specific DNA methylase E4O02_04485 PF01555 DNA methylase E4O02_04495 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4O02_04500 PF01850 PIN domain E4O02_04565 PF05598 Transposase domain (DUF772) E4O02_04565 PF01609 Transposase DDE domain E4O02_04575 PF00300 Histidine phosphatase superfamily (branch 1) E4O02_04590 PF01209 ubiE/COQ5 methyltransferase family E4O02_04605 PF01609 Transposase DDE domain E4O02_04605 PF05598 Transposase domain (DUF772) E4O02_04625 PF01609 Transposase DDE domain E4O02_04625 PF05598 Transposase domain (DUF772) E4O02_04640 PF01209 ubiE/COQ5 methyltransferase family E4O02_04655 PF00300 Histidine phosphatase superfamily (branch 1) E4O02_04665 PF01609 Transposase DDE domain E4O02_04665 PF05598 Transposase domain (DUF772) E4O02_04680 PF01209 ubiE/COQ5 methyltransferase family E4O02_04695 PF00300 Histidine phosphatase superfamily (branch 1) E4O02_04715 PF01966 HD domain E4O02_04745 PF06397 Desulfoferrodoxin, N-terminal domain E4O02_04745 PF01880 Desulfoferrodoxin E4O02_04750 PF16363 GDP-mannose 4,6 dehydratase E4O02_04760 PF04294 VanW like protein E4O02_04765 PF00829 Ribosomal prokaryotic L21 protein E4O02_04775 PF01016 Ribosomal L27 protein E4O02_04780 PF01926 50S ribosome-binding GTPase E4O02_04780 PF01018 GTP1/OBG E4O02_04785 PF01467 Cytidylyltransferase-like E4O02_04800 PF02417 Chromate transporter E4O02_04805 PF02417 Chromate transporter E4O02_04825 PF00501 AMP-binding enzyme E4O02_04835 PF17092 Penicillin-binding protein OB-like domain E4O02_04835 PF00912 Transglycosylase E4O02_04835 PF00905 Penicillin binding protein transpeptidase domain E4O02_04845 PF04225 Opacity-associated protein A LysM-like domain E4O02_04845 PF01551 Peptidase family M23 E4O02_04855 PF00037 4Fe-4S binding domain E4O02_04865 PF03372 Endonuclease/Exonuclease/phosphatase family E4O02_04870 PF00557 Metallopeptidase family M24 E4O02_04875 PF00684 DnaJ central domain E4O02_04875 PF00226 DnaJ domain E4O02_04875 PF01556 DnaJ C terminal domain E4O02_04895 PF01593 Flavin containing amine oxidoreductase E4O02_04900 PF00970 Oxidoreductase FAD-binding domain E4O02_04900 PF00042 Globin E4O02_04900 PF00175 Oxidoreductase NAD-binding domain E4O02_04915 PF12626 Polymerase A arginine-rich C-terminus E4O02_04915 PF01743 Poly A polymerase head domain E4O02_04915 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O02_04925 PF17191 RecG wedge domain E4O02_04925 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O02_04925 PF00270 DEAD/DEAH box helicase E4O02_04930 PF01171 PP-loop family E4O02_04930 PF00117 Glutamine amidotransferase class-I E4O02_04930 PF00958 GMP synthase C terminal domain E4O02_04940 PF00162 Phosphoglycerate kinase E4O02_04945 PF01520 N-acetylmuramoyl-L-alanine amidase E4O02_04955 PF04620 Flagellar filament outer layer protein Flaa E4O02_04965 PF01649 Ribosomal protein S20 E4O02_04975 PF00795 Carbon-nitrogen hydrolase E4O02_04985 PF02464 Competence-damaged protein E4O02_04985 PF18146 Damage-inducible protein CinA KH domain E4O02_04985 PF00994 Probable molybdopterin binding domain E4O02_05035 PF00300 Histidine phosphatase superfamily (branch 1) E4O02_05040 PF07364 Metallopeptidase family M81 E4O02_05040 PF07171 MlrC C-terminus E4O02_05055 PF00005 ABC transporter E4O02_05070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O02_05075 PF00360 Phytochrome region E4O02_05075 PF00990 Diguanylate cyclase, GGDEF domain E4O02_05075 PF01590 GAF domain E4O02_05075 PF00563 EAL domain E4O02_05080 PF00156 Phosphoribosyl transferase domain E4O02_05085 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O02_05085 PF16886 ATPsynthase alpha/beta subunit N-term extension E4O02_05085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O02_05090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O02_05090 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O02_05095 PF01813 ATP synthase subunit D E4O02_05110 PF01250 Ribosomal protein S6 E4O02_05115 PF00436 Single-strand binding protein family E4O02_05120 PF01084 Ribosomal protein S18 E4O02_05125 PF01281 Ribosomal protein L9, N-terminal domain E4O02_05125 PF03948 Ribosomal protein L9, C-terminal domain E4O02_05140 PF00574 Clp protease E4O02_05145 PF05698 Bacterial trigger factor protein (TF) C-terminus E4O02_05145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O02_05145 PF05697 Bacterial trigger factor protein (TF) E4O02_05165 PF00155 Aminotransferase class I and II E4O02_05175 PF01008 Initiation factor 2 subunit family E4O02_05195 PF03796 DnaB-like helicase C terminal domain E4O02_05195 PF00772 DnaB-like helicase N terminal domain E4O02_05205 PF01411 tRNA synthetases class II (A) E4O02_05205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O02_05210 PF13145 PPIC-type PPIASE domain E4O02_05215 PF01029 NusB family E4O02_05230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4O02_05230 PF00270 DEAD/DEAH box helicase E4O02_05230 PF04408 Helicase associated domain (HA2) E4O02_05230 PF00271 Helicase conserved C-terminal domain E4O02_05235 PF02632 BioY family E4O02_05240 PF00005 ABC transporter E4O02_05260 PF01327 Polypeptide deformylase E4O02_05265 PF00551 Formyl transferase E4O02_05265 PF02911 Formyl transferase, C-terminal domain E4O02_05270 PF03793 PASTA domain E4O02_05280 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4O02_05285 PF01488 Shikimate / quinate 5-dehydrogenase E4O02_05285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4O02_05285 PF08501 Shikimate dehydrogenase substrate binding domain E4O02_05295 PF01121 Dephospho-CoA kinase E4O02_05300 PF01367 5'-3' exonuclease, C-terminal SAM fold E4O02_05300 PF01612 3'-5' exonuclease E4O02_05300 PF00476 DNA polymerase family A E4O02_05300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4O02_05320 PF06857 Malonate decarboxylase delta subunit (MdcD) E4O02_05325 PF03328 HpcH/HpaI aldolase/citrate lyase family E4O02_05330 PF04223 Citrate lyase, alpha subunit (CitF) E4O02_05340 PF01418 Helix-turn-helix domain, rpiR family E4O02_05340 PF01380 SIS domain E4O02_05345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O02_05345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O02_05350 PF02447 GntP family permease E4O02_05355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O02_05355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O02_05360 PF01116 Fructose-bisphosphate aldolase class-II E4O02_05370 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_05370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O02_05375 PF01571 Aminomethyltransferase folate-binding domain E4O02_05375 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4O02_05380 PF01597 Glycine cleavage H-protein E4O02_05385 PF02347 Glycine cleavage system P-protein E4O02_05390 PF02347 Glycine cleavage system P-protein E4O02_05400 PF01022 Bacterial regulatory protein, arsR family E4O02_05405 PF00881 Nitroreductase family E4O02_05430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O02_05430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O02_05435 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_05435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O02_05440 PF02256 Iron hydrogenase small subunit E4O02_05440 PF00037 4Fe-4S binding domain E4O02_05440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4O02_05440 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O02_05505 PF00293 NUDIX domain E4O02_05510 PF00881 Nitroreductase family E4O02_05535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O02_05535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O02_05540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O02_05540 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_05545 PF00037 4Fe-4S binding domain E4O02_05545 PF02256 Iron hydrogenase small subunit E4O02_05545 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O02_05545 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4O02_05595 PF00293 NUDIX domain E4O02_05600 PF00881 Nitroreductase family E4O02_05610 PF00293 NUDIX domain E4O02_05645 PF01888 CbiD E4O02_05650 PF12848 ABC transporter E4O02_05650 PF00005 ABC transporter E4O02_05655 PF01513 ATP-NAD kinase E4O02_05665 PF01584 CheW-like domain E4O02_05670 PF00579 tRNA synthetases class I (W and Y) E4O02_05675 PF00152 tRNA synthetases class II (D, K and N) E4O02_05675 PF02938 GAD domain E4O02_05675 PF01336 OB-fold nucleic acid binding domain E4O02_05695 PF08323 Starch synthase catalytic domain E4O02_05695 PF00534 Glycosyl transferases group 1 E4O02_05730 PF04055 Radical SAM superfamily E4O02_05730 PF01938 TRAM domain E4O02_05730 PF00919 Uncharacterized protein family UPF0004 E4O02_05735 PF04055 Radical SAM superfamily E4O02_05740 PF10437 Bacterial lipoate protein ligase C-terminus E4O02_05740 PF03099 Biotin/lipoate A/B protein ligase family E4O02_05745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_05745 PF00005 ABC transporter E4O02_05750 PF00005 ABC transporter E4O02_05750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_05755 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O02_05755 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_05760 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_05765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O02_05770 PF00365 Phosphofructokinase E4O02_05775 PF02132 RecR protein E4O02_05775 PF13662 Toprim domain E4O02_05780 PF02575 YbaB/EbfC DNA-binding family E4O02_05785 PF01351 Ribonuclease HII E4O02_05805 PF02618 YceG-like family E4O02_05820 PF03692 Putative zinc- or iron-chelating domain E4O02_05840 PF00533 BRCA1 C Terminus (BRCT) domain E4O02_05840 PF01653 NAD-dependent DNA ligase adenylation domain E4O02_05840 PF03120 NAD-dependent DNA ligase OB-fold domain E4O02_05845 PF00348 Polyprenyl synthetase E4O02_05855 PF13277 YmdB-like protein E4O02_05880 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4O02_05880 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E4O02_05885 PF08218 Citrate lyase ligase C-terminal domain E4O02_05890 PF05681 Fumarate hydratase (Fumerase) E4O02_05890 PF05683 Fumarase C-terminus E4O02_05895 PF05681 Fumarate hydratase (Fumerase) E4O02_05915 PF00005 ABC transporter E4O02_05920 PF02687 FtsX-like permease family E4O02_05920 PF12704 MacB-like periplasmic core domain E4O02_05935 PF10634 Fe2+ transport protein E4O02_05940 PF03239 Iron permease FTR1 family E4O02_05945 PF00005 ABC transporter E4O02_05955 PF03315 Serine dehydratase beta chain E4O02_05955 PF01842 ACT domain E4O02_05960 PF03313 Serine dehydratase alpha chain E4O02_05970 PF01197 Ribosomal protein L31 E4O02_05975 PF07497 Rho termination factor, RNA-binding domain E4O02_05975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O02_05975 PF07498 Rho termination factor, N-terminal domain E4O02_05990 PF00391 PEP-utilising enzyme, mobile domain E4O02_05990 PF02896 PEP-utilising enzyme, TIM barrel domain E4O02_05990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4O02_06000 PF10397 Adenylosuccinate lyase C-terminus E4O02_06000 PF00206 Lyase E4O02_06005 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O02_06005 PF00072 Response regulator receiver domain E4O02_06015 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_06055 PF13525 Outer membrane lipoprotein E4O02_06065 PF06470 SMC proteins Flexible Hinge Domain E4O02_06065 PF02463 RecF/RecN/SMC N terminal domain E4O02_06075 PF00072 Response regulator receiver domain E4O02_06085 PF01584 CheW-like domain E4O02_06090 PF07194 P2 response regulator binding domain E4O02_06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_06090 PF01627 Hpt domain E4O02_06090 PF01584 CheW-like domain E4O02_06090 PF02895 Signal transducing histidine kinase, homodimeric domain E4O02_06105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4O02_06105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4O02_06110 PF01709 Transcriptional regulator E4O02_06120 PF01321 Creatinase/Prolidase N-terminal domain E4O02_06120 PF00557 Metallopeptidase family M24 E4O02_06145 PF00700 Bacterial flagellin C-terminal helical region E4O02_06145 PF00669 Bacterial flagellin N-terminal helical region E4O02_06150 PF00700 Bacterial flagellin C-terminal helical region E4O02_06150 PF00669 Bacterial flagellin N-terminal helical region E4O02_06160 PF07195 Flagellar hook-associated protein 2 C-terminus E4O02_06160 PF02465 Flagellar hook-associated protein 2 N-terminus E4O02_06175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4O02_06185 PF00672 HAMP domain E4O02_06185 PF01966 HD domain E4O02_06190 PF06969 HemN C-terminal domain E4O02_06190 PF04055 Radical SAM superfamily E4O02_06195 PF10502 Signal peptidase, peptidase S26 E4O02_06200 PF01668 SmpB protein E4O02_06210 PF01300 Telomere recombination E4O02_06230 PF01973 Protein of unknown function DUF115 E4O02_06245 PF00005 ABC transporter E4O02_06275 PF07495 Y_Y_Y domain E4O02_06275 PF00072 Response regulator receiver domain E4O02_06275 PF07494 Two component regulator propeller E4O02_06275 PF12833 Helix-turn-helix domain E4O02_06275 PF00512 His Kinase A (phospho-acceptor) domain E4O02_06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_06280 PF00486 Transcriptional regulatory protein, C terminal E4O02_06280 PF00072 Response regulator receiver domain E4O02_06290 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4O02_06300 PF00488 MutS domain V E4O02_06300 PF01713 Smr domain E4O02_06305 PF03193 RsgA GTPase E4O02_06305 PF16745 RsgA N-terminal domain E4O02_06310 PF01177 Asp/Glu/Hydantoin racemase E4O02_06330 PF00753 Metallo-beta-lactamase superfamily E4O02_06330 PF10996 Beta-Casp domain E4O02_06330 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4O02_06335 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O02_06335 PF00588 SpoU rRNA Methylase family E4O02_06340 PF13393 Histidyl-tRNA synthetase E4O02_06345 PF16363 GDP-mannose 4,6 dehydratase E4O02_06350 PF00483 Nucleotidyl transferase E4O02_06355 PF01370 NAD dependent epimerase/dehydratase family E4O02_06360 PF13439 Glycosyltransferase Family 4 E4O02_06360 PF00534 Glycosyl transferases group 1 E4O02_06370 PF02096 60Kd inner membrane protein E4O02_06370 PF14849 YidC periplasmic domain E4O02_06375 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E4O02_06385 PF02096 60Kd inner membrane protein E4O02_06385 PF14849 YidC periplasmic domain E4O02_06395 PF00535 Glycosyl transferase family 2 E4O02_06400 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E4O02_06405 PF01501 Glycosyl transferase family 8 E4O02_06405 PF00535 Glycosyl transferase family 2 E4O02_06420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O02_06440 PF00535 Glycosyl transferase family 2 E4O02_06445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4O02_06445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4O02_06445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4O02_06455 PF00535 Glycosyl transferase family 2 E4O02_06465 PF03102 NeuB family E4O02_06465 PF08666 SAF domain E4O02_06485 PF00551 Formyl transferase E4O02_06485 PF01370 NAD dependent epimerase/dehydratase family E4O02_06485 PF02911 Formyl transferase, C-terminal domain E4O02_06495 PF02911 Formyl transferase, C-terminal domain E4O02_06495 PF00551 Formyl transferase E4O02_06535 PF16254 Domain of unknown function (DUF4910) E4O02_06535 PF09940 Domain of unknown function (DUF2172) E4O02_06535 PF16221 winged helix-turn-helix E4O02_06545 PF00202 Aminotransferase class-III E4O02_06550 PF02348 Cytidylyltransferase E4O02_06560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O02_06565 PF02719 Polysaccharide biosynthesis protein E4O02_06595 PF13173 AAA domain E4O02_06595 PF13635 Domain of unknown function (DUF4143) E4O02_06600 PF00266 Aminotransferase class-V E4O02_06605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O02_06605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4O02_06625 PF00999 Sodium/hydrogen exchanger family E4O02_06650 PF01966 HD domain E4O02_06665 PF08239 Bacterial SH3 domain E4O02_06670 PF00005 ABC transporter E4O02_06670 PF16326 ABC transporter C-terminal domain E4O02_06670 PF12848 ABC transporter E4O02_06685 PF02540 NAD synthase E4O02_06690 PF01790 Prolipoprotein diacylglyceryl transferase E4O02_06700 PF10609 NUBPL iron-transfer P-loop NTPase E4O02_06730 PF13237 4Fe-4S dicluster domain E4O02_06730 PF10531 SLBB domain E4O02_06730 PF13375 RnfC Barrel sandwich hybrid domain E4O02_06730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O02_06745 PF00849 RNA pseudouridylate synthase E4O02_06745 PF01479 S4 domain E4O02_06750 PF00403 Heavy-metal-associated domain E4O02_06755 PF01022 Bacterial regulatory protein, arsR family E4O02_06760 PF01991 ATP synthase (E/31 kDa) subunit E4O02_06780 PF04060 Putative Fe-S cluster E4O02_06785 PF07650 KH domain E4O02_06785 PF01926 50S ribosome-binding GTPase E4O02_06790 PF01808 AICARFT/IMPCHase bienzyme E4O02_06790 PF02142 MGS-like domain E4O02_06795 PF00551 Formyl transferase E4O02_06800 PF07517 SecA DEAD-like domain E4O02_06800 PF02810 SEC-C motif E4O02_06800 PF07516 SecA Wing and Scaffold domain E4O02_06800 PF01043 SecA preprotein cross-linking domain E4O02_06805 PF00392 Bacterial regulatory proteins, gntR family E4O02_06810 PF00005 ABC transporter E4O02_06825 PF01648 4'-phosphopantetheinyl transferase superfamily E4O02_06835 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4O02_06840 PF02780 Transketolase, C-terminal domain E4O02_06840 PF02779 Transketolase, pyrimidine binding domain E4O02_06840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4O02_06845 PF02629 CoA binding domain E4O02_06845 PF06971 Putative DNA-binding protein N-terminus E4O02_06850 PF10672 S-adenosylmethionine-dependent methyltransferase E4O02_06855 PF17864 RuvB AAA lid domain E4O02_06855 PF05491 RuvB C-terminal winged helix domain E4O02_06855 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O02_06860 PF00465 Iron-containing alcohol dehydrogenase E4O02_06865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O02_06865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O02_06880 PF13186 Iron-sulfur cluster-binding domain E4O02_06895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O02_06915 PF03484 tRNA synthetase B5 domain E4O02_06915 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4O02_06930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4O02_06950 PF00163 Ribosomal protein S4/S9 N-terminal domain E4O02_06950 PF01479 S4 domain E4O02_06980 PF02653 Branched-chain amino acid transport system / permease component E4O02_06985 PF02653 Branched-chain amino acid transport system / permease component E4O02_06990 PF00005 ABC transporter E4O02_06995 PF02608 ABC transporter substrate-binding protein PnrA-like E4O02_07000 PF00753 Metallo-beta-lactamase superfamily E4O02_07000 PF12706 Beta-lactamase superfamily domain E4O02_07020 PF08264 Anticodon-binding domain of tRNA E4O02_07020 PF00133 tRNA synthetases class I (I, L, M and V) E4O02_07020 PF10458 Valyl tRNA synthetase tRNA binding arm E4O02_07025 PF00679 Elongation factor G C-terminus E4O02_07025 PF14492 Elongation Factor G, domain II E4O02_07025 PF00009 Elongation factor Tu GTP binding domain E4O02_07025 PF03144 Elongation factor Tu domain 2 E4O02_07025 PF06421 GTP-binding protein LepA C-terminus E4O02_07030 PF01467 Cytidylyltransferase-like E4O02_07040 PF00773 RNB domain E4O02_07045 PF03853 YjeF-related protein N-terminus E4O02_07045 PF01256 Carbohydrate kinase E4O02_07050 PF00271 Helicase conserved C-terminal domain E4O02_07050 PF04851 Type III restriction enzyme, res subunit E4O02_07050 PF02151 UvrB/uvrC motif E4O02_07050 PF12344 Ultra-violet resistance protein B E4O02_07050 PF17757 UvrB interaction domain E4O02_07055 PF00005 ABC transporter E4O02_07090 PF00664 ABC transporter transmembrane region E4O02_07090 PF00005 ABC transporter E4O02_07095 PF08021 Siderophore-interacting FAD-binding domain E4O02_07095 PF00005 ABC transporter E4O02_07095 PF00664 ABC transporter transmembrane region E4O02_07095 PF04954 Siderophore-interacting protein E4O02_07100 PF12833 Helix-turn-helix domain E4O02_07100 PF02311 AraC-like ligand binding domain E4O02_07110 PF00005 ABC transporter E4O02_07125 PF00005 ABC transporter E4O02_07130 PF00005 ABC transporter E4O02_07130 PF03412 Peptidase C39 family E4O02_07130 PF00664 ABC transporter transmembrane region E4O02_07140 PF04055 Radical SAM superfamily E4O02_07140 PF13186 Iron-sulfur cluster-binding domain E4O02_07190 PF13280 WYL domain E4O02_07190 PF08279 HTH domain E4O02_07195 PF00009 Elongation factor Tu GTP binding domain E4O02_07195 PF03144 Elongation factor Tu domain 2 E4O02_07195 PF09106 Elongation factor SelB, winged helix E4O02_07195 PF09107 Elongation factor SelB, winged helix E4O02_07195 PF09105 Elongation factor SelB, winged helix E4O02_07200 PF02690 Na+/Pi-cotransporter E4O02_07205 PF00999 Sodium/hydrogen exchanger family E4O02_07210 PF17820 PDZ domain E4O02_07210 PF13180 PDZ domain E4O02_07220 PF01728 FtsJ-like methyltransferase E4O02_07225 PF02954 Bacterial regulatory protein, Fis family E4O02_07225 PF00072 Response regulator receiver domain E4O02_07225 PF00158 Sigma-54 interaction domain E4O02_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_07230 PF00512 His Kinase A (phospho-acceptor) domain E4O02_07230 PF00989 PAS fold E4O02_07235 PF09115 DNA polymerase III, delta subunit, C terminal E4O02_07240 PF02674 Colicin V production protein E4O02_07255 PF04101 Glycosyltransferase family 28 C-terminal domain E4O02_07255 PF03033 Glycosyltransferase family 28 N-terminal domain E4O02_07260 PF00455 DeoR C terminal sensor domain E4O02_07260 PF08220 DeoR-like helix-turn-helix domain E4O02_07265 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E4O02_07275 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E4O02_07280 PF17042 Nucleotide-binding C-terminal domain E4O02_07280 PF07005 Sugar-binding N-terminal domain E4O02_07285 PF03812 2-keto-3-deoxygluconate permease E4O02_07305 PF13307 Helicase C-terminal domain E4O02_07305 PF06733 DEAD_2 E4O02_07310 PF02779 Transketolase, pyrimidine binding domain E4O02_07310 PF00456 Transketolase, thiamine diphosphate binding domain E4O02_07325 PF02463 RecF/RecN/SMC N terminal domain E4O02_07345 PF05257 CHAP domain E4O02_07345 PF01476 LysM domain E4O02_07355 PF07475 HPr Serine kinase C-terminal domain E4O02_07355 PF02603 HPr Serine kinase N terminus E4O02_07360 PF00381 PTS HPr component phosphorylation site E4O02_07365 PF01523 Putative modulator of DNA gyrase E4O02_07390 PF00005 ABC transporter E4O02_07425 PF02559 CarD-like/TRCF domain E4O02_07425 PF00270 DEAD/DEAH box helicase E4O02_07425 PF00271 Helicase conserved C-terminal domain E4O02_07425 PF03461 TRCF domain E4O02_07425 PF17757 UvrB interaction domain E4O02_07475 PF04773 FecR protein E4O02_07480 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O02_07480 PF00672 HAMP domain E4O02_07510 PF00586 AIR synthase related protein, N-terminal domain E4O02_07510 PF02769 AIR synthase related protein, C-terminal domain E4O02_07510 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4O02_07515 PF04260 Protein of unknown function (DUF436) E4O02_07520 PF08011 PD-(D/E)XK nuclease superfamily E4O02_07520 PF09820 Predicted AAA-ATPase E4O02_07525 PF02256 Iron hydrogenase small subunit E4O02_07525 PF12838 4Fe-4S dicluster domain E4O02_07525 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O02_07530 PF01609 Transposase DDE domain E4O02_07530 PF05598 Transposase domain (DUF772) E4O02_07535 PF04556 DpnII restriction endonuclease E4O02_07540 PF01555 DNA methylase E4O02_07555 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4O02_07555 PF02843 Phosphoribosylglycinamide synthetase, C domain E4O02_07555 PF02844 Phosphoribosylglycinamide synthetase, N domain E4O02_07560 PF00586 AIR synthase related protein, N-terminal domain E4O02_07560 PF02769 AIR synthase related protein, C-terminal domain E4O02_07565 PF02743 Cache domain E4O02_07565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_07565 PF00672 HAMP domain E4O02_07570 PF04551 GcpE protein E4O02_07585 PF02028 BCCT, betaine/carnitine/choline family transporter E4O02_07590 PF12804 MobA-like NTP transferase domain E4O02_07595 PF01235 Sodium:alanine symporter family E4O02_07620 PF01713 Smr domain E4O02_07640 PF00092 von Willebrand factor type A domain E4O02_07650 PF01882 Protein of unknown function DUF58 E4O02_07675 PF00571 CBS domain E4O02_07675 PF03471 Transporter associated domain E4O02_07680 PF02130 Uncharacterized protein family UPF0054 E4O02_07685 PF07697 7TM-HD extracellular E4O02_07685 PF01966 HD domain E4O02_07685 PF07698 7TM receptor with intracellular HD hydrolase E4O02_07690 PF02562 PhoH-like protein E4O02_07705 PF00121 Triosephosphate isomerase E4O02_07725 PF00753 Metallo-beta-lactamase superfamily E4O02_07725 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4O02_07740 PF10282 Lactonase, 7-bladed beta-propeller E4O02_07745 PF01297 Zinc-uptake complex component A periplasmic E4O02_07750 PF00005 ABC transporter E4O02_07755 PF00950 ABC 3 transport family E4O02_07760 PF00950 ABC 3 transport family E4O02_07770 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O02_07785 PF18269 T3SS EscN ATPase C-terminal domain E4O02_07785 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O02_07785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O02_07790 PF02108 Flagellar assembly protein FliH E4O02_07795 PF14841 FliG middle domain E4O02_07795 PF01706 FliG C-terminal domain E4O02_07795 PF14842 FliG N-terminal domain E4O02_07800 PF08345 Flagellar M-ring protein C-terminal E4O02_07800 PF01514 Secretory protein of YscJ/FliF family E4O02_07805 PF02049 Flagellar hook-basal body complex protein FliE E4O02_07810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O02_07810 PF00460 Flagella basal body rod protein E4O02_07815 PF00460 Flagella basal body rod protein E4O02_07820 PF00004 ATPase family associated with various cellular activities (AAA) E4O02_07820 PF07724 AAA domain (Cdc48 subfamily) E4O02_07825 PF00227 Proteasome subunit E4O02_07830 PF02899 Phage integrase, N-terminal SAM-like domain E4O02_07830 PF00589 Phage integrase family E4O02_07835 PF01396 Topoisomerase DNA binding C4 zinc finger E4O02_07835 PF01131 DNA topoisomerase E4O02_07835 PF01751 Toprim domain E4O02_07840 PF02481 DNA recombination-mediator protein A E4O02_07840 PF17782 DprA winged helix domain E4O02_07850 PF02899 Phage integrase, N-terminal SAM-like domain E4O02_07850 PF00589 Phage integrase family E4O02_07855 PF00091 Tubulin/FtsZ family, GTPase domain E4O02_07855 PF12327 FtsZ family, C-terminal domain E4O02_07860 PF02491 SHS2 domain inserted in FTSA E4O02_07870 PF01098 Cell cycle protein E4O02_07875 PF02875 Mur ligase family, glutamate ligase domain E4O02_07875 PF01225 Mur ligase family, catalytic domain E4O02_07875 PF08245 Mur ligase middle domain E4O02_07885 PF01795 MraW methylase family E4O02_07890 PF02381 MraZ protein, putative antitoxin-like E4O02_07895 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O02_07895 PF00326 Prolyl oligopeptidase family E4O02_07930 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4O02_07930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4O02_07930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4O02_07940 PF02233 NAD(P) transhydrogenase beta subunit E4O02_07975 PF04055 Radical SAM superfamily E4O02_07980 PF00118 TCP-1/cpn60 chaperonin family E4O02_07995 PF01264 Chorismate synthase E4O02_08000 PF02390 Putative methyltransferase E4O02_08040 PF01740 STAS domain E4O02_08060 PF01212 Beta-eliminating lyase E4O02_08065 PF05191 Adenylate kinase, active site lid E4O02_08080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4O02_08080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4O02_08085 PF02576 RimP N-terminal domain E4O02_08085 PF17384 RimP C-terminal SH3 domain E4O02_08090 PF13184 NusA-like KH domain E4O02_08090 PF08529 NusA N-terminal domain E4O02_08090 PF00575 S1 RNA binding domain E4O02_08095 PF00009 Elongation factor Tu GTP binding domain E4O02_08095 PF11987 Translation-initiation factor 2 E4O02_08095 PF04760 Translation initiation factor IF-2, N-terminal region E4O02_08100 PF02033 Ribosome-binding factor A E4O02_08105 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4O02_08115 PF00005 ABC transporter E4O02_08120 PF00005 ABC transporter E4O02_08120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_08125 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_08125 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O02_08130 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_08135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O02_08140 PF01965 DJ-1/PfpI family E4O02_08140 PF12833 Helix-turn-helix domain E4O02_08165 PF02401 LytB protein E4O02_08170 PF00842 Alanine racemase, C-terminal domain E4O02_08170 PF01168 Alanine racemase, N-terminal domain E4O02_08180 PF16258 Domain of unknown function (DUF4912) E4O02_08195 PF03129 Anticodon binding domain E4O02_08195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O02_08195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O02_08215 PF08340 Domain of unknown function (DUF1732) E4O02_08215 PF03755 YicC-like family, N-terminal region E4O02_08220 PF01225 Mur ligase family, catalytic domain E4O02_08220 PF02875 Mur ligase family, glutamate ligase domain E4O02_08220 PF08245 Mur ligase middle domain E4O02_08225 PF08245 Mur ligase middle domain E4O02_08225 PF02875 Mur ligase family, glutamate ligase domain E4O02_08230 PF00849 RNA pseudouridylate synthase E4O02_08230 PF01479 S4 domain E4O02_08235 PF00849 RNA pseudouridylate synthase E4O02_08245 PF00398 Ribosomal RNA adenine dimethylase E4O02_08250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4O02_08255 PF00258 Flavodoxin E4O02_08255 PF00753 Metallo-beta-lactamase superfamily E4O02_08260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_08260 PF00005 ABC transporter E4O02_08265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_08265 PF00005 ABC transporter E4O02_08270 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O02_08270 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_08275 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_08285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O02_08290 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_08295 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_08295 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O02_08300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_08300 PF00005 ABC transporter E4O02_08305 PF00005 ABC transporter E4O02_08305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_08325 PF01588 Putative tRNA binding domain E4O02_08325 PF09334 tRNA synthetases class I (M) E4O02_08335 PF00005 ABC transporter E4O02_08340 PF00005 ABC transporter E4O02_08355 PF01554 MatE E4O02_08360 PF02743 Cache domain E4O02_08360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_08360 PF00672 HAMP domain E4O02_08375 PF00665 Integrase core domain E4O02_08375 PF13333 Integrase core domain E4O02_08375 PF13276 HTH-like domain E4O02_08395 PF00301 Rubredoxin E4O02_08410 PF14492 Elongation Factor G, domain II E4O02_08410 PF03764 Elongation factor G, domain IV E4O02_08410 PF00009 Elongation factor Tu GTP binding domain E4O02_08410 PF03144 Elongation factor Tu domain 2 E4O02_08410 PF00679 Elongation factor G C-terminus E4O02_08415 PF00177 Ribosomal protein S7p/S5e E4O02_08420 PF00164 Ribosomal protein S12/S23 E4O02_08450 PF00436 Single-strand binding protein family E4O02_08680 PF11756 Nitrous oxide-stimulated promoter E4O02_08685 PF04304 Protein of unknown function (DUF454) E4O02_08690 PF03932 CutC family E4O02_08700 PF01751 Toprim domain E4O02_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_08700 PF00986 DNA gyrase B subunit, carboxyl terminus E4O02_08700 PF00204 DNA gyrase B E4O02_08715 PF00899 ThiF family E4O02_08720 PF00953 Glycosyl transferase family 4 E4O02_08730 PF00860 Permease family E4O02_08750 PF17936 Bacterial Ig domain E4O02_08750 PF02872 5'-nucleotidase, C-terminal domain E4O02_08750 PF00149 Calcineurin-like phosphoesterase E4O02_08765 PF16325 Peptidase family U32 C-terminal domain E4O02_08765 PF01136 Peptidase family U32 E4O02_08770 PF07859 alpha/beta hydrolase fold E4O02_08775 PF00005 ABC transporter E4O02_08775 PF00664 ABC transporter transmembrane region E4O02_08780 PF01725 Ham1 family E4O02_08790 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4O02_08795 PF01416 tRNA pseudouridine synthase E4O02_08805 PF02146 Sir2 family E4O02_08810 PF08668 HDOD domain E4O02_08825 PF00152 tRNA synthetases class II (D, K and N) E4O02_08830 PF00005 ABC transporter E4O02_08830 PF02687 FtsX-like permease family E4O02_08830 PF12704 MacB-like periplasmic core domain E4O02_08835 PF00005 ABC transporter E4O02_08850 PF03819 MazG nucleotide pyrophosphohydrolase domain E4O02_08855 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4O02_08855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O02_08860 PF03129 Anticodon binding domain E4O02_08860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O02_08860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O02_08860 PF02824 TGS domain E4O02_08870 PF02542 YgbB family E4O02_08870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4O02_08875 PF02542 YgbB family E4O02_08890 PF00924 Mechanosensitive ion channel E4O02_08905 PF10509 Galactokinase galactose-binding signature E4O02_08905 PF08544 GHMP kinases C terminal E4O02_08910 PF00795 Carbon-nitrogen hydrolase E4O02_08915 PF00595 PDZ domain E4O02_08925 PF00072 Response regulator receiver domain E4O02_08930 PF02021 Uncharacterised protein family UPF0102 E4O02_08945 PF02403 Seryl-tRNA synthetase N-terminal domain E4O02_08945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O02_08965 PF00158 Sigma-54 interaction domain E4O02_08965 PF01590 GAF domain E4O02_08970 PF01168 Alanine racemase, N-terminal domain E4O02_08990 PF03006 Haemolysin-III related E4O02_08995 PF01551 Peptidase family M23 E4O02_08995 PF10145 Phage-related minor tail protein E4O02_08995 PF01464 Transglycosylase SLT domain E4O02_09020 PF00924 Mechanosensitive ion channel E4O02_09025 PF00072 Response regulator receiver domain E4O02_09025 PF00196 Bacterial regulatory proteins, luxR family E4O02_09035 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O02_09040 PF00672 HAMP domain E4O02_09040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_09040 PF02743 Cache domain E4O02_09045 PF00004 ATPase family associated with various cellular activities (AAA) E4O02_09045 PF07724 AAA domain (Cdc48 subfamily) E4O02_09045 PF17871 AAA lid domain E4O02_09045 PF02861 Clp amino terminal domain, pathogenicity island component E4O02_09045 PF10431 C-terminal, D2-small domain, of ClpB protein E4O02_09050 PF03806 AbgT putative transporter family E4O02_09060 PF03601 Conserved hypothetical protein 698 E4O02_09070 PF07885 Ion channel E4O02_09070 PF02254 TrkA-N domain E4O02_09075 PF05343 M42 glutamyl aminopeptidase E4O02_09090 PF00155 Aminotransferase class I and II E4O02_09110 PF00343 Carbohydrate phosphorylase E4O02_09130 PF04997 RNA polymerase Rpb1, domain 1 E4O02_09130 PF00623 RNA polymerase Rpb1, domain 2 E4O02_09130 PF04983 RNA polymerase Rpb1, domain 3 E4O02_09130 PF04998 RNA polymerase Rpb1, domain 5 E4O02_09130 PF05000 RNA polymerase Rpb1, domain 4 E4O02_09135 PF04560 RNA polymerase Rpb2, domain 7 E4O02_09135 PF04561 RNA polymerase Rpb2, domain 2 E4O02_09135 PF04565 RNA polymerase Rpb2, domain 3 E4O02_09135 PF10385 RNA polymerase beta subunit external 1 domain E4O02_09135 PF04563 RNA polymerase beta subunit E4O02_09135 PF00562 RNA polymerase Rpb2, domain 6 E4O02_09140 PF00542 Ribosomal protein L7/L12 C-terminal domain E4O02_09140 PF16320 Ribosomal protein L7/L12 dimerisation domain E4O02_09145 PF00466 Ribosomal protein L10 E4O02_09150 PF00687 Ribosomal protein L1p/L10e family E4O02_09155 PF00298 Ribosomal protein L11, RNA binding domain E4O02_09155 PF03946 Ribosomal protein L11, N-terminal domain E4O02_09160 PF02357 Transcription termination factor nusG E4O02_09160 PF00467 KOW motif E4O02_09165 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4O02_09175 PF00471 Ribosomal protein L33 E4O02_09195 PF00664 ABC transporter transmembrane region E4O02_09195 PF03412 Peptidase C39 family E4O02_09195 PF00005 ABC transporter E4O02_09210 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain E4O02_09210 PF01522 Polysaccharide deacetylase E4O02_09225 PF00664 ABC transporter transmembrane region E4O02_09225 PF00005 ABC transporter E4O02_09225 PF03412 Peptidase C39 family E4O02_09245 PF01381 Helix-turn-helix E4O02_09255 PF03949 Malic enzyme, NAD binding domain E4O02_09255 PF00390 Malic enzyme, N-terminal domain E4O02_09260 PF01202 Shikimate kinase E4O02_09270 PF09820 Predicted AAA-ATPase E4O02_09270 PF08011 PD-(D/E)XK nuclease superfamily E4O02_09275 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4O02_09275 PF01871 AMMECR1 E4O02_09280 PF12796 Ankyrin repeats (3 copies) E4O02_09285 PF02547 Queuosine biosynthesis protein E4O02_09295 PF00005 ABC transporter E4O02_09305 PF00005 ABC transporter E4O02_09355 PF00266 Aminotransferase class-V E4O02_09375 PF01206 Sulfurtransferase TusA E4O02_09390 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4O02_09390 PF02772 S-adenosylmethionine synthetase, central domain E4O02_09390 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4O02_09405 PF00183 Hsp90 protein E4O02_09440 PF01165 Ribosomal protein S21 E4O02_09445 PF01554 MatE E4O02_09450 PF00696 Amino acid kinase family E4O02_09455 PF12390 Selenocysteine synthase N terminal E4O02_09455 PF03841 L-seryl-tRNA selenium transferase E4O02_09460 PF09820 Predicted AAA-ATPase E4O02_09460 PF08011 PD-(D/E)XK nuclease superfamily E4O02_09465 PF02151 UvrB/uvrC motif E4O02_09465 PF01541 GIY-YIG catalytic domain E4O02_09465 PF08459 UvrC Helix-hairpin-helix N-terminal E4O02_09480 PF07715 TonB-dependent Receptor Plug Domain E4O02_09480 PF00593 TonB dependent receptor E4O02_09490 PF02472 Biopolymer transport protein ExbD/TolR E4O02_09495 PF01618 MotA/TolQ/ExbB proton channel family E4O02_09515 PF12106 Colicin E5 ribonuclease domain E4O02_09520 PF11480 Colicin-E5 Imm protein E4O02_09550 PF05488 PAAR motif E4O02_09550 PF05593 RHS Repeat E4O02_09585 PF00580 UvrD/REP helicase N-terminal domain E4O02_09585 PF13361 UvrD-like helicase C-terminal domain E4O02_09590 PF00664 ABC transporter transmembrane region E4O02_09590 PF00005 ABC transporter E4O02_09595 PF00664 ABC transporter transmembrane region E4O02_09595 PF00005 ABC transporter E4O02_09600 PF00375 Sodium:dicarboxylate symporter family E4O02_09605 PF02073 Thermophilic metalloprotease (M29) E4O02_09610 PF10135 Rod binding protein E4O02_09615 PF00460 Flagella basal body rod protein E4O02_09615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O02_09620 PF00460 Flagella basal body rod protein E4O02_09620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O02_09625 PF00669 Bacterial flagellin N-terminal helical region E4O02_09625 PF00700 Bacterial flagellin C-terminal helical region E4O02_09630 PF00156 Phosphoribosyl transferase domain E4O02_09635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4O02_09635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4O02_09640 PF01226 Formate/nitrite transporter E4O02_09645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4O02_09645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4O02_09650 PF01204 Trehalase E4O02_09665 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4O02_09675 PF00830 Ribosomal L28 family E4O02_09685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_09685 PF00005 ABC transporter E4O02_09690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_09690 PF00005 ABC transporter E4O02_09695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O02_09700 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O02_09700 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_09710 PF01180 Dihydroorotate dehydrogenase E4O02_09720 PF01336 OB-fold nucleic acid binding domain E4O02_09720 PF00152 tRNA synthetases class II (D, K and N) E4O02_09725 PF07943 Penicillin-binding protein 5, C-terminal domain E4O02_09725 PF00768 D-alanyl-D-alanine carboxypeptidase E4O02_09730 PF04002 RadC-like JAB domain E4O02_09735 PF00156 Phosphoribosyl transferase domain E4O02_09740 PF03485 Arginyl tRNA synthetase N terminal domain E4O02_09740 PF05746 DALR anticodon binding domain E4O02_09740 PF00750 tRNA synthetases class I (R) E4O02_09745 PF08207 Elongation factor P (EF-P) KOW-like domain E4O02_09745 PF01132 Elongation factor P (EF-P) OB domain E4O02_09745 PF09285 Elongation factor P, C-terminal E4O02_09760 PF13277 YmdB-like protein E4O02_09770 PF00817 impB/mucB/samB family E4O02_09770 PF11799 impB/mucB/samB family C-terminal domain E4O02_09770 PF11798 IMS family HHH motif E4O02_09785 PF03102 NeuB family E4O02_09785 PF08666 SAF domain E4O02_09790 PF07009 NusG domain II E4O02_09795 PF01734 Patatin-like phospholipase E4O02_09800 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O02_09805 PF04011 LemA family E4O02_09810 PF02653 Branched-chain amino acid transport system / permease component E4O02_09815 PF02653 Branched-chain amino acid transport system / permease component E4O02_09820 PF00005 ABC transporter E4O02_09825 PF02608 ABC transporter substrate-binding protein PnrA-like E4O02_10040 PF00113 Enolase, C-terminal TIM barrel domain E4O02_10040 PF03952 Enolase, N-terminal domain E4O02_10055 PF00679 Elongation factor G C-terminus E4O02_10055 PF14492 Elongation Factor G, domain II E4O02_10055 PF03764 Elongation factor G, domain IV E4O02_10055 PF00009 Elongation factor Tu GTP binding domain E4O02_10055 PF03144 Elongation factor Tu domain 2 E4O02_10070 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_10085 PF00501 AMP-binding enzyme E4O02_10085 PF13193 AMP-binding enzyme C-terminal domain E4O02_10090 PF00877 NlpC/P60 family E4O02_10100 PF01963 TraB family E4O02_10105 PF02926 THUMP domain E4O02_10105 PF01170 Putative RNA methylase family UPF0020 E4O02_10110 PF03979 Sigma-70 factor, region 1.1 E4O02_10110 PF00140 Sigma-70 factor, region 1.2 E4O02_10110 PF04542 Sigma-70 region 2 E4O02_10110 PF04539 Sigma-70 region 3 E4O02_10110 PF04545 Sigma-70, region 4 E4O02_10115 PF00166 Chaperonin 10 Kd subunit E4O02_10135 PF00871 Acetokinase family E4O02_10140 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O02_10145 PF01554 MatE E4O02_10150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O02_10150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O02_10180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O02_10180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O02_10185 PF00005 ABC transporter E4O02_10200 PF07687 Peptidase dimerisation domain E4O02_10200 PF01546 Peptidase family M20/M25/M40 E4O02_10230 PF00664 ABC transporter transmembrane region E4O02_10230 PF00005 ABC transporter E4O02_10235 PF08021 Siderophore-interacting FAD-binding domain E4O02_10235 PF00005 ABC transporter E4O02_10235 PF04954 Siderophore-interacting protein E4O02_10235 PF00664 ABC transporter transmembrane region E4O02_10250 PF00005 ABC transporter E4O02_10275 PF02311 AraC-like ligand binding domain E4O02_10275 PF12833 Helix-turn-helix domain E4O02_10280 PF01734 Patatin-like phospholipase E4O02_10310 PF00580 UvrD/REP helicase N-terminal domain E4O02_10310 PF13361 UvrD-like helicase C-terminal domain E4O02_10335 PF01245 Ribosomal protein L19 E4O02_10340 PF01746 tRNA (Guanine-1)-methyltransferase E4O02_10345 PF01782 RimM N-terminal domain E4O02_10355 PF00886 Ribosomal protein S16 E4O02_10360 PF02277 Phosphoribosyltransferase E4O02_10365 PF01381 Helix-turn-helix E4O02_10385 PF00849 RNA pseudouridylate synthase E4O02_10385 PF01479 S4 domain E4O02_10390 PF04079 Segregation and condensation complex subunit ScpB E4O02_10395 PF02616 Segregation and condensation protein ScpA E4O02_10400 PF00154 recA bacterial DNA recombination protein E4O02_10410 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_10410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O02_10430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O02_10430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O02_10430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O02_10430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O02_10435 PF02308 MgtC family E4O02_10450 PF04055 Radical SAM superfamily E4O02_10465 PF00730 HhH-GPD superfamily base excision DNA repair protein E4O02_10470 PF00391 PEP-utilising enzyme, mobile domain E4O02_10470 PF00224 Pyruvate kinase, barrel domain E4O02_10470 PF02887 Pyruvate kinase, alpha/beta domain E4O02_10490 PF00342 Phosphoglucose isomerase E4O02_10495 PF01926 50S ribosome-binding GTPase E4O02_10505 PF01479 S4 domain E4O02_10505 PF00849 RNA pseudouridylate synthase E4O02_10510 PF00271 Helicase conserved C-terminal domain E4O02_10510 PF00270 DEAD/DEAH box helicase E4O02_10510 PF17191 RecG wedge domain E4O02_10515 PF00990 Diguanylate cyclase, GGDEF domain E4O02_10520 PF00990 Diguanylate cyclase, GGDEF domain E4O02_10535 PF03577 Peptidase family C69 E4O02_10540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_10540 PF00672 HAMP domain E4O02_10540 PF17202 Single cache domain 3 E4O02_10545 PF12169 DNA polymerase III subunits gamma and tau domain III E4O02_10560 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O02_10565 PF00581 Rhodanese-like domain E4O02_10565 PF12368 Rhodanase C-terminal E4O02_10565 PF17773 UPF0176 acylphosphatase like domain E4O02_10570 PF00488 MutS domain V E4O02_10570 PF01624 MutS domain I E4O02_10570 PF05188 MutS domain II E4O02_10570 PF05192 MutS domain III E4O02_10570 PF05190 MutS family domain IV E4O02_10580 PF07244 Surface antigen variable number repeat E4O02_10580 PF01103 Surface antigen E4O02_10590 PF02223 Thymidylate kinase E4O02_10600 PF00834 Ribulose-phosphate 3 epimerase family E4O02_10620 PF13185 GAF domain E4O02_10620 PF02954 Bacterial regulatory protein, Fis family E4O02_10620 PF00158 Sigma-54 interaction domain E4O02_10625 PF03880 DbpA RNA binding domain E4O02_10635 PF07670 Nucleoside recognition E4O02_10640 PF01906 Putative heavy-metal-binding E4O02_10645 PF01175 Urocanase Rossmann-like domain E4O02_10645 PF17392 Urocanase C-terminal domain E4O02_10645 PF17391 Urocanase N-terminal domain E4O02_10650 PF13649 Methyltransferase domain E4O02_10655 PF02743 Cache domain E4O02_10655 PF00672 HAMP domain E4O02_10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_10670 PF18693 TRAM domain E4O02_10670 PF04055 Radical SAM superfamily E4O02_10670 PF00919 Uncharacterized protein family UPF0004 E4O02_10690 PF02424 ApbE family E4O02_10695 PF01252 Signal peptidase (SPase) II E4O02_10700 PF00027 Cyclic nucleotide-binding domain E4O02_10700 PF13545 Crp-like helix-turn-helix domain E4O02_10710 PF02811 PHP domain E4O02_10715 PF05958 tRNA (Uracil-5-)-methyltransferase E4O02_10725 PF01145 SPFH domain / Band 7 family E4O02_10730 PF01145 SPFH domain / Band 7 family E4O02_10750 PF00005 ABC transporter E4O02_10755 PF08543 Phosphomethylpyrimidine kinase E4O02_10765 PF01636 Phosphotransferase enzyme family E4O02_10775 PF00731 AIR carboxylase E4O02_10780 PF01259 SAICAR synthetase E4O02_10790 PF00436 Single-strand binding protein family E4O02_10795 PF02699 Preprotein translocase subunit E4O02_10800 PF02355 Protein export membrane protein E4O02_10805 PF02355 Protein export membrane protein E4O02_10810 PF00266 Aminotransferase class-V E4O02_10820 PF01206 Sulfurtransferase TusA E4O02_10855 PF00004 ATPase family associated with various cellular activities (AAA) E4O02_10855 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O02_10855 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4O02_10880 PF01458 Uncharacterized protein family (UPF0051) E4O02_10885 PF00005 ABC transporter E4O02_10920 PF03390 2-hydroxycarboxylate transporter family E4O02_10960 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O02_10960 PF00588 SpoU rRNA Methylase family E4O02_10965 PF13419 Haloacid dehalogenase-like hydrolase E4O02_10975 PF00571 CBS domain E4O02_10975 PF01769 Divalent cation transporter E4O02_10975 PF03448 MgtE intracellular N domain E4O02_10985 PF04452 RNA methyltransferase E4O02_11010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O02_11010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O02_11015 PF14572 Phosphoribosyl synthetase-associated domain E4O02_11015 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4O02_11020 PF00990 Diguanylate cyclase, GGDEF domain E4O02_11020 PF00072 Response regulator receiver domain E4O02_11025 PF00563 EAL domain E4O02_11025 PF00990 Diguanylate cyclase, GGDEF domain E4O02_11030 PF03193 RsgA GTPase E4O02_11040 PF01026 TatD related DNase E4O02_11045 PF01207 Dihydrouridine synthase (Dus) E4O02_11065 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_11070 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_11075 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_11080 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_11085 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_11090 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_11120 PF02899 Phage integrase, N-terminal SAM-like domain E4O02_11120 PF00589 Phage integrase family E4O02_11130 PF01420 Type I restriction modification DNA specificity domain E4O02_11135 PF02661 Fic/DOC family E4O02_11135 PF13332 Hemagglutinin repeat E4O02_11135 PF05860 haemagglutination activity domain E4O02_11135 PF03543 Yersinia/Haemophilus virulence surface antigen E4O02_11135 PF13018 Extended Signal Peptide of Type V secretion system E4O02_11140 PF12161 HsdM N-terminal domain E4O02_11140 PF02384 N-6 DNA Methylase E4O02_11145 PF08463 EcoEI R protein C-terminal E4O02_11145 PF00271 Helicase conserved C-terminal domain E4O02_11145 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) E4O02_11145 PF04851 Type III restriction enzyme, res subunit E4O02_11165 PF16360 GTP-binding GTPase Middle Region E4O02_11165 PF13167 GTP-binding GTPase N-terminal E4O02_11165 PF01926 50S ribosome-binding GTPase E4O02_11185 PF01551 Peptidase family M23 E4O02_11185 PF04225 Opacity-associated protein A LysM-like domain E4O02_11190 PF02423 Ornithine cyclodeaminase/mu-crystallin family E4O02_11195 PF01235 Sodium:alanine symporter family E4O02_11200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O02_11205 PF00813 FliP family E4O02_11215 PF04509 CheC-like family E4O02_11215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O02_11220 PF02154 Flagellar motor switch protein FliM E4O02_11220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O02_11225 PF03748 Flagellar basal body-associated protein FliL E4O02_11230 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4O02_11230 PF00691 OmpA family E4O02_11235 PF01618 MotA/TolQ/ExbB proton channel family E4O02_11245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O02_11245 PF00460 Flagella basal body rod protein E4O02_11245 PF07559 Flagellar basal body protein FlaE E4O02_11250 PF03963 Flagellar hook capping protein - N-terminal region E4O02_11270 PF03030 Inorganic H+ pyrophosphatase E4O02_11290 PF01339 CheB methylesterase E4O02_11290 PF00072 Response regulator receiver domain E4O02_11295 PF01739 CheR methyltransferase, SAM binding domain E4O02_11295 PF03705 CheR methyltransferase, all-alpha domain E4O02_11310 PF00005 ABC transporter E4O02_11310 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O02_11315 PF01195 Peptidyl-tRNA hydrolase E4O02_11325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O02_11330 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_11335 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O02_11335 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_11340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_11340 PF00005 ABC transporter E4O02_11345 PF00005 ABC transporter E4O02_11345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_11355 PF01545 Cation efflux family E4O02_11355 PF16916 Dimerisation domain of Zinc Transporter E4O02_11380 PF00226 DnaJ domain E4O02_11380 PF01556 DnaJ C terminal domain E4O02_11380 PF00684 DnaJ central domain E4O02_11385 PF00012 Hsp70 protein E4O02_11390 PF01025 GrpE E4O02_11395 PF02661 Fic/DOC family E4O02_11395 PF12728 Helix-turn-helix domain E4O02_11405 PF00005 ABC transporter E4O02_11410 PF02571 Precorrin-6x reductase CbiJ/CobK E4O02_11415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4O02_11415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O02_11420 PF09820 Predicted AAA-ATPase E4O02_11420 PF08011 PD-(D/E)XK nuclease superfamily E4O02_11435 PF01554 MatE E4O02_11445 PF11761 Cobalamin biosynthesis central region E4O02_11445 PF01890 Cobalamin synthesis G C-terminus E4O02_11445 PF11760 Cobalamin synthesis G N-terminal E4O02_11450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O02_11455 PF00664 ABC transporter transmembrane region E4O02_11455 PF00005 ABC transporter E4O02_11460 PF00005 ABC transporter E4O02_11460 PF16326 ABC transporter C-terminal domain E4O02_11460 PF12848 ABC transporter E4O02_11480 PF13614 AAA domain E4O02_11485 PF17762 HTH domain found in ParB protein E4O02_11485 PF02195 ParB-like nuclease domain E4O02_11525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O02_11525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4O02_11530 PF00698 Acyl transferase domain E4O02_11545 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4O02_11545 PF07055 Enoyl reductase FAD binding domain E4O02_11545 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4O02_11555 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O02_11555 PF00270 DEAD/DEAH box helicase E4O02_11555 PF17191 RecG wedge domain E4O02_11580 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_11595 PF00364 Biotin-requiring enzyme E4O02_11600 PF02785 Biotin carboxylase C-terminal domain E4O02_11600 PF00289 Biotin carboxylase, N-terminal domain E4O02_11600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4O02_11605 PF01039 Carboxyl transferase domain E4O02_11610 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4O02_11615 PF00221 Aromatic amino acid lyase E4O02_11630 PF03773 Predicted permease E4O02_11640 PF07726 ATPase family associated with various cellular activities (AAA) E4O02_11640 PF17863 AAA lid domain E4O02_11680 PF01425 Amidase E4O02_11685 PF02637 GatB domain E4O02_11685 PF02934 GatB/GatE catalytic domain E4O02_11740 PF05488 PAAR motif E4O02_11740 PF05593 RHS Repeat E4O02_11755 PF05593 RHS Repeat E4O02_11755 PF05488 PAAR motif E4O02_11765 PF05488 PAAR motif E4O02_11765 PF05593 RHS Repeat E4O02_11820 PF05593 RHS Repeat E4O02_11820 PF03527 RHS protein E4O02_11830 PF03527 RHS protein E4O02_11830 PF05593 RHS Repeat E4O02_11895 PF00270 DEAD/DEAH box helicase E4O02_11895 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O02_11895 PF17191 RecG wedge domain E4O02_11940 PF02743 Cache domain E4O02_11940 PF00672 HAMP domain E4O02_11940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_11975 PF12705 PD-(D/E)XK nuclease superfamily E4O02_11975 PF00580 UvrD/REP helicase N-terminal domain E4O02_11975 PF13361 UvrD-like helicase C-terminal domain E4O02_11980 PF12705 PD-(D/E)XK nuclease superfamily E4O02_11985 PF02254 TrkA-N domain E4O02_11985 PF02080 TrkA-C domain E4O02_11990 PF02386 Cation transport protein E4O02_11995 PF01841 Transglutaminase-like superfamily E4O02_12010 PF09190 DALR domain E4O02_12010 PF01406 tRNA synthetases class I (C) catalytic domain E4O02_12015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4O02_12015 PF01565 FAD binding domain E4O02_12025 PF13635 Domain of unknown function (DUF4143) E4O02_12025 PF13173 AAA domain E4O02_12030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O02_12030 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_12050 PF01555 DNA methylase E4O02_12055 PF07676 WD40-like Beta Propeller Repeat E4O02_12055 PF00326 Prolyl oligopeptidase family E4O02_12060 PF00128 Alpha amylase, catalytic domain E4O02_12060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4O02_12070 PF00266 Aminotransferase class-V E4O02_12075 PF01761 3-dehydroquinate synthase E4O02_12080 PF01048 Phosphorylase superfamily E4O02_12085 PF08011 PD-(D/E)XK nuclease superfamily E4O02_12085 PF09820 Predicted AAA-ATPase E4O02_12100 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O02_12105 PF03466 LysR substrate binding domain E4O02_12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4O02_12115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O02_12120 PF00005 ABC transporter E4O02_12120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_12125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O02_12125 PF00005 ABC transporter E4O02_12130 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_12130 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O02_12135 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_12150 PF00005 ABC transporter E4O02_12155 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_12160 PF00005 ABC transporter E4O02_12160 PF08402 TOBE domain E4O02_12165 PF13439 Glycosyltransferase Family 4 E4O02_12165 PF00534 Glycosyl transferases group 1 E4O02_12180 PF03577 Peptidase family C69 E4O02_12185 PF08245 Mur ligase middle domain E4O02_12185 PF02875 Mur ligase family, glutamate ligase domain E4O02_12225 PF03023 Lipid II flippase MurJ E4O02_12240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_12240 PF00672 HAMP domain E4O02_12240 PF02743 Cache domain E4O02_12245 PF03477 ATP cone domain E4O02_12245 PF02867 Ribonucleotide reductase, barrel domain E4O02_12245 PF00317 Ribonucleotide reductase, all-alpha domain E4O02_12250 PF00274 Fructose-bisphosphate aldolase class-I E4O02_12260 PF14492 Elongation Factor G, domain II E4O02_12260 PF03764 Elongation factor G, domain IV E4O02_12260 PF00009 Elongation factor Tu GTP binding domain E4O02_12260 PF00679 Elongation factor G C-terminus E4O02_12260 PF03144 Elongation factor Tu domain 2 E4O02_12310 PF02080 TrkA-C domain E4O02_12310 PF02254 TrkA-N domain E4O02_12315 PF03989 DNA gyrase C-terminal domain, beta-propeller E4O02_12315 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O02_12320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4O02_12325 PF01594 AI-2E family transporter E4O02_12330 PF00268 Ribonucleotide reductase, small chain E4O02_12335 PF00672 HAMP domain E4O02_12335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_12335 PF02203 Tar ligand binding domain homologue E4O02_12340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O02_12345 PF04542 Sigma-70 region 2 E4O02_12345 PF08281 Sigma-70, region 4 E4O02_12365 PF01554 MatE E4O02_12370 PF00440 Bacterial regulatory proteins, tetR family E4O02_12380 PF09827 CRISPR associated protein Cas2 E4O02_12385 PF01867 CRISPR associated protein Cas1 E4O02_12390 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 E4O02_12390 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 E4O02_12390 PF13395 HNH endonuclease E4O02_12390 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 E4O02_12400 PF00270 DEAD/DEAH box helicase E4O02_12400 PF00271 Helicase conserved C-terminal domain E4O02_12400 PF00570 HRDC domain E4O02_12400 PF16124 RecQ zinc-binding E4O02_12400 PF09382 RQC domain E4O02_12415 PF00571 CBS domain E4O02_12415 PF03471 Transporter associated domain E4O02_12415 PF01595 Cyclin M transmembrane N-terminal domain E4O02_12420 PF01595 Cyclin M transmembrane N-terminal domain E4O02_12420 PF03471 Transporter associated domain E4O02_12420 PF00571 CBS domain E4O02_12425 PF07726 ATPase family associated with various cellular activities (AAA) E4O02_12425 PF17863 AAA lid domain E4O02_12435 PF02254 TrkA-N domain E4O02_12435 PF02080 TrkA-C domain E4O02_12440 PF02386 Cation transport protein E4O02_12445 PF02511 Thymidylate synthase complementing protein E4O02_12490 PF00005 ABC transporter E4O02_12505 PF01343 Peptidase family S49 E4O02_12510 PF01926 50S ribosome-binding GTPase E4O02_12510 PF06071 Protein of unknown function (DUF933) E4O02_12520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_12520 PF02743 Cache domain E4O02_12520 PF00672 HAMP domain E4O02_12530 PF03781 Sulfatase-modifying factor enzyme 1 E4O02_12565 PF01470 Pyroglutamyl peptidase E4O02_12580 PF00005 ABC transporter E4O02_12580 PF08402 TOBE domain E4O02_12585 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_12605 PF00962 Adenosine/AMP deaminase E4O02_12610 PF01925 Sulfite exporter TauE/SafE E4O02_12615 PF00892 EamA-like transporter family E4O02_12640 PF13651 Adenine-specific methyltransferase EcoRI E4O02_12645 PF13651 Adenine-specific methyltransferase EcoRI E4O02_12655 PF08011 PD-(D/E)XK nuclease superfamily E4O02_12655 PF09820 Predicted AAA-ATPase E4O02_12675 PF00664 ABC transporter transmembrane region E4O02_12675 PF00005 ABC transporter E4O02_12685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O02_12700 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4O02_12710 PF00069 Protein kinase domain E4O02_12710 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O02_12720 PF02595 Glycerate kinase family E4O02_12725 PF05656 Protein of unknown function (DUF805) E4O02_12730 PF03600 Citrate transporter E4O02_12735 PF12557 Cob(I)alamin adenosyltransferase N terminal E4O02_12735 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E4O02_12760 PF07238 PilZ domain E4O02_12800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4O02_12800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4O02_12820 PF02661 Fic/DOC family E4O02_12830 PF01850 PIN domain E4O02_12865 PF02463 RecF/RecN/SMC N terminal domain E4O02_12870 PF00712 DNA polymerase III beta subunit, N-terminal domain E4O02_12870 PF02767 DNA polymerase III beta subunit, central domain E4O02_12870 PF02768 DNA polymerase III beta subunit, C-terminal domain E4O02_12875 PF01661 Macro domain E4O02_12880 PF02661 Fic/DOC family E4O02_12880 PF13784 Fic/DOC family N-terminal E4O02_12895 PF01966 HD domain E4O02_12895 PF00013 KH domain E4O02_12895 PF12072 Domain of unknown function (DUF3552) E4O02_12905 PF02504 Fatty acid synthesis protein E4O02_12910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O02_12915 PF02673 Bacitracin resistance protein BacA E4O02_12920 PF17854 FtsK alpha domain E4O02_12920 PF09397 Ftsk gamma domain E4O02_12920 PF01580 FtsK/SpoIIIE family E4O02_12925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4O02_12925 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4O02_12925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4O02_12930 PF00990 Diguanylate cyclase, GGDEF domain E4O02_12935 PF00883 Cytosol aminopeptidase family, catalytic domain E4O02_12935 PF02789 Cytosol aminopeptidase family, N-terminal domain E4O02_12940 PF01066 CDP-alcohol phosphatidyltransferase E4O02_12990 PF02743 Cache domain E4O02_12990 PF00672 HAMP domain E4O02_12990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_12995 PF01048 Phosphorylase superfamily E4O02_13020 PF02971 Formiminotransferase domain E4O02_13020 PF07837 Formiminotransferase domain, N-terminal subdomain E4O02_13025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_13025 PF02743 Cache domain E4O02_13025 PF00672 HAMP domain E4O02_13035 PF01212 Beta-eliminating lyase E4O02_13055 PF00106 short chain dehydrogenase E4O02_13060 PF13411 MerR HTH family regulatory protein E4O02_13105 PF13411 MerR HTH family regulatory protein E4O02_13135 PF00005 ABC transporter E4O02_13135 PF00664 ABC transporter transmembrane region E4O02_13140 PF00664 ABC transporter transmembrane region E4O02_13140 PF00005 ABC transporter E4O02_13145 PF00005 ABC transporter E4O02_13160 PF13476 AAA domain E4O02_13165 PF00149 Calcineurin-like phosphoesterase E4O02_13170 PF00672 HAMP domain E4O02_13170 PF17202 Single cache domain 3 E4O02_13170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_13175 PF07702 UTRA domain E4O02_13175 PF00392 Bacterial regulatory proteins, gntR family E4O02_13180 PF00005 ABC transporter E4O02_13190 PF00664 ABC transporter transmembrane region E4O02_13190 PF00005 ABC transporter E4O02_13195 PF16864 Dimerisation domain E4O02_13195 PF00891 O-methyltransferase domain E4O02_13200 PF00664 ABC transporter transmembrane region E4O02_13200 PF00005 ABC transporter E4O02_13200 PF08021 Siderophore-interacting FAD-binding domain E4O02_13200 PF04954 Siderophore-interacting protein E4O02_13220 PF00891 O-methyltransferase domain E4O02_13235 PF00664 ABC transporter transmembrane region E4O02_13235 PF00005 ABC transporter E4O02_13245 PF00440 Bacterial regulatory proteins, tetR family E4O02_13245 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O02_13250 PF00375 Sodium:dicarboxylate symporter family E4O02_13260 PF00392 Bacterial regulatory proteins, gntR family E4O02_13260 PF07729 FCD domain E4O02_13265 PF01266 FAD dependent oxidoreductase E4O02_13270 PF00664 ABC transporter transmembrane region E4O02_13270 PF00005 ABC transporter E4O02_13275 PF00005 ABC transporter E4O02_13280 PF04324 BFD-like [2Fe-2S] binding domain E4O02_13280 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_13290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O02_13290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O02_13355 PF01547 Bacterial extracellular solute-binding protein E4O02_13360 PF00528 Binding-protein-dependent transport system inner membrane component E4O02_13365 PF00005 ABC transporter E4O02_13365 PF08402 TOBE domain E4O02_13370 PF13635 Domain of unknown function (DUF4143) E4O02_13370 PF13173 AAA domain E4O02_13375 PF07687 Peptidase dimerisation domain E4O02_13375 PF01546 Peptidase family M20/M25/M40 E4O02_13380 PF07730 Histidine kinase E4O02_13385 PF00196 Bacterial regulatory proteins, luxR family E4O02_13385 PF00072 Response regulator receiver domain E4O02_13405 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_13405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O02_13410 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O02_13425 PF01081 KDPG and KHG aldolase E4O02_13430 PF01850 PIN domain E4O02_13450 PF00258 Flavodoxin E4O02_13460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O02_13460 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4O02_13460 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4O02_13460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O02_13465 PF00563 EAL domain E4O02_13465 PF08448 PAS fold E4O02_13465 PF00990 Diguanylate cyclase, GGDEF domain E4O02_13480 PF00990 Diguanylate cyclase, GGDEF domain E4O02_13480 PF00072 Response regulator receiver domain E4O02_13495 PF01207 Dihydrouridine synthase (Dus) E4O02_13525 PF03824 High-affinity nickel-transport protein E4O02_13540 PF04468 PSP1 C-terminal conserved region E4O02_13545 PF03885 Protein of unknown function (DUF327) E4O02_13555 PF01551 Peptidase family M23 E4O02_13555 PF04225 Opacity-associated protein A LysM-like domain E4O02_13560 PF01409 tRNA synthetases class II core domain (F) E4O02_13565 PF00128 Alpha amylase, catalytic domain E4O02_13575 PF12683 Protein of unknown function (DUF3798) E4O02_13580 PF00005 ABC transporter E4O02_13600 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O02_13600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O02_13605 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4O02_13605 PF00970 Oxidoreductase FAD-binding domain E4O02_13605 PF00175 Oxidoreductase NAD-binding domain E4O02_13615 PF01435 Peptidase family M48 E4O02_13615 PF07720 Tetratricopeptide repeat E4O02_13620 PF02743 Cache domain E4O02_13620 PF00672 HAMP domain E4O02_13620 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O02_13685 PF03412 Peptidase C39 family E4O02_13685 PF00005 ABC transporter E4O02_13685 PF00664 ABC transporter transmembrane region E4O02_13700 PF02915 Rubrerythrin E4O02_13705 PF00270 DEAD/DEAH box helicase E4O02_13705 PF09382 RQC domain E4O02_13705 PF16124 RecQ zinc-binding E4O02_13705 PF00271 Helicase conserved C-terminal domain E4O02_13705 PF00570 HRDC domain E4O02_13715 PF02565 Recombination protein O C terminal E4O02_13715 PF11967 Recombination protein O N terminal E4O02_13725 PF01702 Queuine tRNA-ribosyltransferase E4O02_13760 PF00005 ABC transporter E4O02_13790 PF03551 Transcriptional regulator PadR-like family E4O02_13800 PF07722 Peptidase C26 E4O02_13805 PF13520 Amino acid permease E4O02_13820 PF01791 DeoC/LacD family aldolase E4O02_13825 PF00210 Ferritin-like domain E4O02_13830 PF07687 Peptidase dimerisation domain E4O02_13830 PF01546 Peptidase family M20/M25/M40 E4O02_13850 PF01979 Amidohydrolase family E4O02_13860 PF01313 Bacterial export proteins, family 3 E4O02_13865 PF01311 Bacterial export proteins, family 1 E4O02_13870 PF01312 FlhB HrpN YscU SpaS Family E4O02_13875 PF00771 FHIPEP family E4O02_13880 PF00005 ABC transporter E4O02_13885 PF00005 ABC transporter E4O02_13890 PF01192 RNA polymerase Rpb6 E4O02_13905 PF00872 Transposase, Mutator family E4O02_13950 PF00365 Phosphofructokinase E4O02_13965 PF00027 Cyclic nucleotide-binding domain E4O02_13965 PF13545 Crp-like helix-turn-helix domain E4O02_13970 PF09028 Mac 1 E4O02_13980 PF07687 Peptidase dimerisation domain E4O02_13980 PF01546 Peptidase family M20/M25/M40 E4O02_13990 PF04545 Sigma-70, region 4 E4O02_13990 PF04539 Sigma-70 region 3 E4O02_13990 PF04542 Sigma-70 region 2 E4O02_13990 PF00140 Sigma-70 factor, region 1.2 E4O02_13990 PF03979 Sigma-70 factor, region 1.1 E4O02_13995 PF01136 Peptidase family U32 E4O02_13995 PF16325 Peptidase family U32 C-terminal domain E4O02_14015 PF01926 50S ribosome-binding GTPase E4O02_14015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4O02_14020 PF00391 PEP-utilising enzyme, mobile domain E4O02_14020 PF02896 PEP-utilising enzyme, TIM barrel domain E4O02_14020 PF05524 PEP-utilising enzyme, N-terminal E4O02_14045 PF00665 Integrase core domain E4O02_14045 PF13333 Integrase core domain E4O02_14045 PF13276 HTH-like domain E4O02_14155 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4O02_14160 PF00005 ABC transporter E4O02_14175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_14175 PF00672 HAMP domain E4O02_14175 PF02743 Cache domain E4O02_14195 PF09820 Predicted AAA-ATPase E4O02_14195 PF08011 PD-(D/E)XK nuclease superfamily E4O02_14200 PF03063 Prismane/CO dehydrogenase family E4O02_14215 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O02_14220 PF02687 FtsX-like permease family E4O02_14220 PF00005 ABC transporter E4O02_14220 PF12704 MacB-like periplasmic core domain E4O02_14255 PF00004 ATPase family associated with various cellular activities (AAA) E4O02_14255 PF01434 Peptidase family M41 E4O02_14255 PF17862 AAA+ lid domain E4O02_14285 PF01048 Phosphorylase superfamily E4O02_14295 PF02743 Cache domain E4O02_14295 PF00672 HAMP domain E4O02_14295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_14310 PF01680 SOR/SNZ family E4O02_14315 PF10509 Galactokinase galactose-binding signature E4O02_14315 PF08544 GHMP kinases C terminal E4O02_14315 PF00288 GHMP kinases N terminal domain E4O02_14320 PF01171 PP-loop family E4O02_14345 PF12419 SNF2 Helicase protein E4O02_14345 PF00271 Helicase conserved C-terminal domain E4O02_14345 PF00176 SNF2 family N-terminal domain E4O02_14355 PF00403 Heavy-metal-associated domain E4O02_14365 PF00293 NUDIX domain E4O02_14370 PF00210 Ferritin-like domain E4O02_14375 PF00578 AhpC/TSA family E4O02_14375 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4O02_14380 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4O02_14380 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4O02_14395 PF16193 AAA C-terminal domain E4O02_14395 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O02_14395 PF12002 MgsA AAA+ ATPase C terminal E4O02_14400 PF05343 M42 glutamyl aminopeptidase E4O02_14410 PF01268 Formate--tetrahydrofolate ligase E4O02_14415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O02_14415 PF03129 Anticodon binding domain E4O02_14435 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4O02_14435 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O02_14460 PF00005 ABC transporter E4O02_14465 PF00005 ABC transporter E4O02_14475 PF00072 Response regulator receiver domain E4O02_14475 PF04397 LytTr DNA-binding domain E4O02_14490 PF01230 HIT domain E4O02_14510 PF00109 Beta-ketoacyl synthase, N-terminal domain E4O02_14510 PF02801 Beta-ketoacyl synthase, C-terminal domain E4O02_14520 PF00501 AMP-binding enzyme E4O02_14520 PF13193 AMP-binding enzyme C-terminal domain E4O02_14525 PF03099 Biotin/lipoate A/B protein ligase family E4O02_14525 PF02237 Biotin protein ligase C terminal domain E4O02_14525 PF08279 HTH domain E4O02_14530 PF01515 Phosphate acetyl/butaryl transferase E4O02_14535 PF13174 Tetratricopeptide repeat E4O02_14535 PF13176 Tetratricopeptide repeat E4O02_14540 PF03960 ArsC family E4O02_14545 PF00005 ABC transporter E4O02_14545 PF12848 ABC transporter E4O02_14555 PF00672 HAMP domain E4O02_14555 PF02743 Cache domain E4O02_14555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O02_14565 PF00005 ABC transporter E4O02_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O02_14580 PF00204 DNA gyrase B E4O02_14580 PF00986 DNA gyrase B subunit, carboxyl terminus E4O02_14580 PF01751 Toprim domain