locus-tag class description E4O03_00005 PF00308 Bacterial dnaA protein E4O03_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4O03_00005 PF11638 DnaA N-terminal domain E4O03_00020 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4O03_00020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4O03_00020 PF14579 Helix-hairpin-helix motif E4O03_00020 PF02811 PHP domain E4O03_00030 PF17239 Family of unknown function (DUF5312) E4O03_00045 PF00664 ABC transporter transmembrane region E4O03_00045 PF00005 ABC transporter E4O03_00050 PF00664 ABC transporter transmembrane region E4O03_00050 PF00005 ABC transporter E4O03_00070 PF00561 alpha/beta hydrolase fold E4O03_00095 PF01032 FecCD transport family E4O03_00100 PF00005 ABC transporter E4O03_00105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4O03_00105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4O03_00115 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O03_00115 PF01799 [2Fe-2S] binding domain E4O03_00125 PF13478 XdhC Rossmann domain E4O03_00125 PF02625 XdhC and CoxI family E4O03_00130 PF02028 BCCT, betaine/carnitine/choline family transporter E4O03_00135 PF00221 Aromatic amino acid lyase E4O03_00170 PF07559 Flagellar basal body protein FlaE E4O03_00170 PF00460 Flagella basal body rod protein E4O03_00170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O03_00180 PF01618 MotA/TolQ/ExbB proton channel family E4O03_00185 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4O03_00185 PF00691 OmpA family E4O03_00190 PF03748 Flagellar basal body-associated protein FliL E4O03_00195 PF02154 Flagellar motor switch protein FliM E4O03_00195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O03_00200 PF04509 CheC-like family E4O03_00200 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O03_00210 PF00813 FliP family E4O03_00215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O03_00220 PF02423 Ornithine cyclodeaminase/mu-crystallin family E4O03_00225 PF01476 LysM domain E4O03_00225 PF08525 Opacity-associated protein A N-terminal motif E4O03_00225 PF01551 Peptidase family M23 E4O03_00255 PF00082 Subtilase family E4O03_00255 PF05922 Peptidase inhibitor I9 E4O03_00260 PF01926 50S ribosome-binding GTPase E4O03_00260 PF13167 GTP-binding GTPase N-terminal E4O03_00260 PF16360 GTP-binding GTPase Middle Region E4O03_00285 PF01207 Dihydrouridine synthase (Dus) E4O03_00290 PF01026 TatD related DNase E4O03_00300 PF13635 Domain of unknown function (DUF4143) E4O03_00300 PF13173 AAA domain E4O03_00305 PF00990 Diguanylate cyclase, GGDEF domain E4O03_00310 PF00990 Diguanylate cyclase, GGDEF domain E4O03_00310 PF00072 Response regulator receiver domain E4O03_00315 PF14572 Phosphoribosyl synthetase-associated domain E4O03_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4O03_00320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O03_00320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O03_00350 PF04452 RNA methyltransferase E4O03_00360 PF01769 Divalent cation transporter E4O03_00360 PF03448 MgtE intracellular N domain E4O03_00360 PF00571 CBS domain E4O03_00370 PF13419 Haloacid dehalogenase-like hydrolase E4O03_00375 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O03_00375 PF00588 SpoU rRNA Methylase family E4O03_00410 PF03390 2-hydroxycarboxylate transporter family E4O03_00440 PF00005 ABC transporter E4O03_00445 PF01458 Uncharacterized protein family (UPF0051) E4O03_00455 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O03_00455 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4O03_00455 PF00004 ATPase family associated with various cellular activities (AAA) E4O03_00465 PF01934 Protein of unknown function DUF86 E4O03_00515 PF01206 Sulfurtransferase TusA E4O03_00525 PF00266 Aminotransferase class-V E4O03_00530 PF02355 Protein export membrane protein E4O03_00535 PF02355 Protein export membrane protein E4O03_00540 PF02699 Preprotein translocase subunit E4O03_00545 PF00436 Single-strand binding protein family E4O03_00550 PF00106 short chain dehydrogenase E4O03_00555 PF01259 SAICAR synthetase E4O03_00560 PF00731 AIR carboxylase E4O03_00570 PF01636 Phosphotransferase enzyme family E4O03_00580 PF00664 ABC transporter transmembrane region E4O03_00580 PF00005 ABC transporter E4O03_00585 PF08543 Phosphomethylpyrimidine kinase E4O03_00590 PF00005 ABC transporter E4O03_00615 PF01145 SPFH domain / Band 7 family E4O03_00620 PF01145 SPFH domain / Band 7 family E4O03_00640 PF01641 SelR domain E4O03_00640 PF01625 Peptide methionine sulfoxide reductase E4O03_00660 PF02719 Polysaccharide biosynthesis protein E4O03_00715 PF03412 Peptidase C39 family E4O03_00715 PF00005 ABC transporter E4O03_00715 PF00664 ABC transporter transmembrane region E4O03_00720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4O03_00770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O03_00780 PF01799 [2Fe-2S] binding domain E4O03_00780 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O03_00785 PF00941 FAD binding domain in molybdopterin dehydrogenase E4O03_00785 PF03450 CO dehydrogenase flavoprotein C-terminal domain E4O03_00815 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_00820 PF00085 Thioredoxin E4O03_00830 PF02384 N-6 DNA Methylase E4O03_00835 PF01420 Type I restriction modification DNA specificity domain E4O03_00855 PF00589 Phage integrase family E4O03_00855 PF02899 Phage integrase, N-terminal SAM-like domain E4O03_00860 PF11867 Domain of unknown function (DUF3387) E4O03_00860 PF18766 SWI2/SNF2 ATPase E4O03_00860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4O03_00865 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4O03_00870 PF03553 Na+/H+ antiporter family E4O03_00875 PF00005 ABC transporter E4O03_00880 PF01032 FecCD transport family E4O03_00900 PF05922 Peptidase inhibitor I9 E4O03_00900 PF00082 Subtilase family E4O03_00905 PF00009 Elongation factor Tu GTP binding domain E4O03_00905 PF03144 Elongation factor Tu domain 2 E4O03_00905 PF03143 Elongation factor Tu C-terminal domain E4O03_00910 PF00338 Ribosomal protein S10p/S20e E4O03_00915 PF00297 Ribosomal protein L3 E4O03_00920 PF00573 Ribosomal protein L4/L1 family E4O03_00925 PF00276 Ribosomal protein L23 E4O03_00930 PF00181 Ribosomal Proteins L2, RNA binding domain E4O03_00930 PF03947 Ribosomal Proteins L2, C-terminal domain E4O03_00935 PF00203 Ribosomal protein S19 E4O03_00940 PF00237 Ribosomal protein L22p/L17e E4O03_00945 PF00189 Ribosomal protein S3, C-terminal domain E4O03_00945 PF07650 KH domain E4O03_00950 PF00252 Ribosomal protein L16p/L10e E4O03_00955 PF00831 Ribosomal L29 protein E4O03_00960 PF00366 Ribosomal protein S17 E4O03_00965 PF00238 Ribosomal protein L14p/L23e E4O03_00970 PF00467 KOW motif E4O03_00970 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4O03_00975 PF00281 Ribosomal protein L5 E4O03_00975 PF00673 ribosomal L5P family C-terminus E4O03_00980 PF00253 Ribosomal protein S14p/S29e E4O03_00985 PF00410 Ribosomal protein S8 E4O03_00990 PF00347 Ribosomal protein L6 E4O03_00995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4O03_01000 PF00333 Ribosomal protein S5, N-terminal domain E4O03_01000 PF03719 Ribosomal protein S5, C-terminal domain E4O03_01005 PF00327 Ribosomal protein L30p/L7e E4O03_01010 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4O03_01015 PF00344 SecY translocase E4O03_01020 PF00444 Ribosomal protein L36 E4O03_01025 PF00416 Ribosomal protein S13/S18 E4O03_01030 PF00411 Ribosomal protein S11 E4O03_01035 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4O03_01035 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4O03_01035 PF01000 RNA polymerase Rpb3/RpoA insert domain E4O03_01040 PF01196 Ribosomal protein L17 E4O03_01060 PF00708 Acylphosphatase E4O03_01070 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O03_01085 PF02082 Transcriptional regulator E4O03_01090 PF13460 NAD(P)H-binding E4O03_01110 PF13091 PLD-like domain E4O03_01110 PF13396 Phospholipase_D-nuclease N-terminal E4O03_01115 PF01139 tRNA-splicing ligase RtcB E4O03_01135 PF03852 DNA mismatch endonuclease Vsr E4O03_01140 PF00145 C-5 cytosine-specific DNA methylase E4O03_01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_01150 PF00072 Response regulator receiver domain E4O03_01230 PF01609 Transposase DDE domain E4O03_01230 PF05598 Transposase domain (DUF772) E4O03_01235 PF00005 ABC transporter E4O03_01250 PF01022 Bacterial regulatory protein, arsR family E4O03_01255 PF11855 Protein of unknown function (DUF3375) E4O03_01275 PF12729 Four helix bundle sensory module for signal transduction E4O03_01275 PF00672 HAMP domain E4O03_01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_01295 PF00664 ABC transporter transmembrane region E4O03_01295 PF03412 Peptidase C39 family E4O03_01295 PF00005 ABC transporter E4O03_01300 PF00005 ABC transporter E4O03_01300 PF00664 ABC transporter transmembrane region E4O03_01310 PF05726 Pirin C-terminal cupin domain E4O03_01310 PF02678 Pirin E4O03_01320 PF01613 Flavin reductase like domain E4O03_01325 PF01638 HxlR-like helix-turn-helix E4O03_01330 PF03606 C4-dicarboxylate anaerobic carrier E4O03_01335 PF07687 Peptidase dimerisation domain E4O03_01335 PF01546 Peptidase family M20/M25/M40 E4O03_01345 PF00664 ABC transporter transmembrane region E4O03_01345 PF00005 ABC transporter E4O03_01350 PF00664 ABC transporter transmembrane region E4O03_01350 PF00005 ABC transporter E4O03_01355 PF08021 Siderophore-interacting FAD-binding domain E4O03_01355 PF00005 ABC transporter E4O03_01355 PF00664 ABC transporter transmembrane region E4O03_01355 PF04954 Siderophore-interacting protein E4O03_01365 PF00664 ABC transporter transmembrane region E4O03_01365 PF00005 ABC transporter E4O03_01370 PF00005 ABC transporter E4O03_01385 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O03_01385 PF00440 Bacterial regulatory proteins, tetR family E4O03_01390 PF07977 FabA-like domain E4O03_01400 PF08245 Mur ligase middle domain E4O03_01400 PF01225 Mur ligase family, catalytic domain E4O03_01400 PF02875 Mur ligase family, glutamate ligase domain E4O03_01405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O03_01405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O03_01410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O03_01410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O03_01415 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O03_01420 PF00596 Class II Aldolase and Adducin N-terminal domain E4O03_01430 PF01008 Initiation factor 2 subunit family E4O03_01435 PF01636 Phosphotransferase enzyme family E4O03_01440 PF01134 Glucose inhibited division protein A E4O03_01440 PF13932 GidA associated domain E4O03_01445 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O03_01455 PF02508 Rnf-Nqr subunit, membrane protein E4O03_01460 PF02508 Rnf-Nqr subunit, membrane protein E4O03_01465 PF04205 FMN-binding domain E4O03_01470 PF03116 NQR2, RnfD, RnfE family E4O03_01475 PF10531 SLBB domain E4O03_01475 PF13375 RnfC Barrel sandwich hybrid domain E4O03_01475 PF13237 4Fe-4S dicluster domain E4O03_01475 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O03_01480 PF00581 Rhodanese-like domain E4O03_01480 PF17773 UPF0176 acylphosphatase like domain E4O03_01490 PF13519 von Willebrand factor type A domain E4O03_01505 PF02896 PEP-utilising enzyme, TIM barrel domain E4O03_01505 PF00391 PEP-utilising enzyme, mobile domain E4O03_01515 PF16314 Domain of unknown function (DUF4954) E4O03_01530 PF02743 Cache domain E4O03_01530 PF00672 HAMP domain E4O03_01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_01535 PF00672 HAMP domain E4O03_01535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_01535 PF02743 Cache domain E4O03_01550 PF00572 Ribosomal protein L13 E4O03_01555 PF00380 Ribosomal protein S9/S16 E4O03_01565 PF00196 Bacterial regulatory proteins, luxR family E4O03_01565 PF00072 Response regulator receiver domain E4O03_01570 PF00596 Class II Aldolase and Adducin N-terminal domain E4O03_01590 PF01479 S4 domain E4O03_01590 PF00849 RNA pseudouridylate synthase E4O03_01595 PF00579 tRNA synthetases class I (W and Y) E4O03_01610 PF02308 MgtC family E4O03_01615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O03_01615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O03_01615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O03_01615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O03_01635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O03_01635 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_01640 PF01609 Transposase DDE domain E4O03_01640 PF13808 DDE_Tnp_1-associated E4O03_01650 PF02872 5'-nucleotidase, C-terminal domain E4O03_01650 PF00149 Calcineurin-like phosphoesterase E4O03_01655 PF00154 recA bacterial DNA recombination protein E4O03_01660 PF02616 Segregation and condensation protein ScpA E4O03_01665 PF04079 Segregation and condensation complex subunit ScpB E4O03_01670 PF00849 RNA pseudouridylate synthase E4O03_01670 PF01479 S4 domain E4O03_01700 PF12704 MacB-like periplasmic core domain E4O03_01700 PF00005 ABC transporter E4O03_01700 PF02687 FtsX-like permease family E4O03_01705 PF02277 Phosphoribosyltransferase E4O03_01710 PF00886 Ribosomal protein S16 E4O03_01720 PF01782 RimM N-terminal domain E4O03_01725 PF01746 tRNA (Guanine-1)-methyltransferase E4O03_01730 PF01245 Ribosomal protein L19 E4O03_01745 PF00580 UvrD/REP helicase N-terminal domain E4O03_01745 PF13361 UvrD-like helicase C-terminal domain E4O03_01750 PF08011 PD-(D/E)XK nuclease superfamily E4O03_01750 PF09820 Predicted AAA-ATPase E4O03_01755 PF07687 Peptidase dimerisation domain E4O03_01755 PF01546 Peptidase family M20/M25/M40 E4O03_01770 PF00005 ABC transporter E4O03_01775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O03_01775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O03_01780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O03_01780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O03_01785 PF01554 MatE E4O03_01790 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_01795 PF00871 Acetokinase family E4O03_01815 PF00166 Chaperonin 10 Kd subunit E4O03_01820 PF03979 Sigma-70 factor, region 1.1 E4O03_01820 PF04542 Sigma-70 region 2 E4O03_01820 PF04539 Sigma-70 region 3 E4O03_01820 PF04545 Sigma-70, region 4 E4O03_01820 PF00140 Sigma-70 factor, region 1.2 E4O03_01825 PF02926 THUMP domain E4O03_01825 PF01170 Putative RNA methylase family UPF0020 E4O03_01830 PF01963 TraB family E4O03_01840 PF00877 NlpC/P60 family E4O03_01845 PF00501 AMP-binding enzyme E4O03_01845 PF13193 AMP-binding enzyme C-terminal domain E4O03_01855 PF03781 Sulfatase-modifying factor enzyme 1 E4O03_01865 PF00679 Elongation factor G C-terminus E4O03_01865 PF14492 Elongation Factor G, domain II E4O03_01865 PF03764 Elongation factor G, domain IV E4O03_01865 PF00009 Elongation factor Tu GTP binding domain E4O03_01865 PF03144 Elongation factor Tu domain 2 E4O03_01875 PF00113 Enolase, C-terminal TIM barrel domain E4O03_01875 PF03952 Enolase, N-terminal domain E4O03_01890 PF02446 4-alpha-glucanotransferase E4O03_01900 PF01820 D-ala D-ala ligase N-terminus E4O03_01900 PF07478 D-ala D-ala ligase C-terminus E4O03_01910 PF02654 Cobalamin-5-phosphate synthase E4O03_01920 PF07730 Histidine kinase E4O03_01935 PF00005 ABC transporter E4O03_01950 PF05175 Methyltransferase small domain E4O03_01955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O03_01960 PF08534 Redoxin E4O03_01965 PF04205 FMN-binding domain E4O03_01965 PF12801 4Fe-4S binding domain E4O03_01975 PF04073 Aminoacyl-tRNA editing domain E4O03_01985 PF02653 Branched-chain amino acid transport system / permease component E4O03_01990 PF02653 Branched-chain amino acid transport system / permease component E4O03_01990 PF11862 Domain of unknown function (DUF3382) E4O03_01995 PF00005 ABC transporter E4O03_01995 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O03_02000 PF00005 ABC transporter E4O03_02015 PF02733 Dak1 domain E4O03_02020 PF02734 DAK2 domain E4O03_02020 PF02733 Dak1 domain E4O03_02030 PF01032 FecCD transport family E4O03_02040 PF02599 Global regulator protein family E4O03_02045 PF02623 FliW protein E4O03_02050 PF00669 Bacterial flagellin N-terminal helical region E4O03_02050 PF07196 Flagellin hook IN motif E4O03_02050 PF00700 Bacterial flagellin C-terminal helical region E4O03_02055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O03_02055 PF07196 Flagellin hook IN motif E4O03_02075 PF02545 Maf-like protein E4O03_02080 PF00318 Ribosomal protein S2 E4O03_02085 PF00889 Elongation factor TS E4O03_02090 PF01765 Ribosome recycling factor E4O03_02095 PF01255 Putative undecaprenyl diphosphate synthase E4O03_02105 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4O03_02105 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4O03_02105 PF13288 DXP reductoisomerase C-terminal domain E4O03_02110 PF17820 PDZ domain E4O03_02110 PF02163 Peptidase family M50 E4O03_02115 PF04205 FMN-binding domain E4O03_02120 PF08264 Anticodon-binding domain of tRNA E4O03_02120 PF13603 Leucyl-tRNA synthetase, Domain 2 E4O03_02120 PF09334 tRNA synthetases class I (M) E4O03_02120 PF00133 tRNA synthetases class I (I, L, M and V) E4O03_02125 PF02073 Thermophilic metalloprotease (M29) E4O03_02130 PF00375 Sodium:dicarboxylate symporter family E4O03_02135 PF00005 ABC transporter E4O03_02135 PF00664 ABC transporter transmembrane region E4O03_02140 PF00664 ABC transporter transmembrane region E4O03_02140 PF00005 ABC transporter E4O03_02145 PF00580 UvrD/REP helicase N-terminal domain E4O03_02145 PF13361 UvrD-like helicase C-terminal domain E4O03_02170 PF03806 AbgT putative transporter family E4O03_02175 PF17871 AAA lid domain E4O03_02175 PF10431 C-terminal, D2-small domain, of ClpB protein E4O03_02175 PF00004 ATPase family associated with various cellular activities (AAA) E4O03_02175 PF07724 AAA domain (Cdc48 subfamily) E4O03_02175 PF02861 Clp amino terminal domain, pathogenicity island component E4O03_02180 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_02180 PF00672 HAMP domain E4O03_02200 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O03_02210 PF00196 Bacterial regulatory proteins, luxR family E4O03_02210 PF00072 Response regulator receiver domain E4O03_02215 PF00924 Mechanosensitive ion channel E4O03_02230 PF04542 Sigma-70 region 2 E4O03_02230 PF08281 Sigma-70, region 4 E4O03_02240 PF01464 Transglycosylase SLT domain E4O03_02240 PF01551 Peptidase family M23 E4O03_02240 PF10145 Phage-related minor tail protein E4O03_02245 PF03006 Haemolysin-III related E4O03_02250 PF08011 PD-(D/E)XK nuclease superfamily E4O03_02250 PF09820 Predicted AAA-ATPase E4O03_02270 PF01168 Alanine racemase, N-terminal domain E4O03_02275 PF01590 GAF domain E4O03_02275 PF00158 Sigma-54 interaction domain E4O03_02295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O03_02295 PF02403 Seryl-tRNA synthetase N-terminal domain E4O03_02310 PF02021 Uncharacterised protein family UPF0102 E4O03_02315 PF00072 Response regulator receiver domain E4O03_02320 PF01312 FlhB HrpN YscU SpaS Family E4O03_02325 PF00595 PDZ domain E4O03_02330 PF00795 Carbon-nitrogen hydrolase E4O03_02335 PF08544 GHMP kinases C terminal E4O03_02335 PF10509 Galactokinase galactose-binding signature E4O03_02350 PF00924 Mechanosensitive ion channel E4O03_02360 PF13419 Haloacid dehalogenase-like hydrolase E4O03_02370 PF02542 YgbB family E4O03_02375 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4O03_02375 PF02542 YgbB family E4O03_02385 PF03129 Anticodon binding domain E4O03_02385 PF02824 TGS domain E4O03_02385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O03_02385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O03_02390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O03_02390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4O03_02395 PF03819 MazG nucleotide pyrophosphohydrolase domain E4O03_02400 PF09820 Predicted AAA-ATPase E4O03_02400 PF08011 PD-(D/E)XK nuclease superfamily E4O03_02410 PF00665 Integrase core domain E4O03_02410 PF13333 Integrase core domain E4O03_02435 PF00860 Permease family E4O03_02445 PF00953 Glycosyl transferase family 4 E4O03_02450 PF00899 ThiF family E4O03_02455 PF00204 DNA gyrase B E4O03_02455 PF00986 DNA gyrase B subunit, carboxyl terminus E4O03_02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_02455 PF01751 Toprim domain E4O03_02465 PF03932 CutC family E4O03_02475 PF06368 Methylaspartate mutase E chain (MutE) E4O03_02480 PF07476 Methylaspartate ammonia-lyase C-terminus E4O03_02480 PF05034 Methylaspartate ammonia-lyase N-terminus E4O03_02490 PF01032 FecCD transport family E4O03_02495 PF00005 ABC transporter E4O03_02510 PF07687 Peptidase dimerisation domain E4O03_02510 PF01546 Peptidase family M20/M25/M40 E4O03_02520 PF01297 Zinc-uptake complex component A periplasmic E4O03_02540 PF03129 Anticodon binding domain E4O03_02540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O03_02540 PF04073 Aminoacyl-tRNA editing domain E4O03_02550 PF10502 Signal peptidase, peptidase S26 E4O03_02560 PF13407 Periplasmic binding protein domain E4O03_02560 PF18610 Periplasmic binding protein domain E4O03_02565 PF00005 ABC transporter E4O03_02570 PF02653 Branched-chain amino acid transport system / permease component E4O03_02575 PF13847 Methyltransferase domain E4O03_02590 PF08544 GHMP kinases C terminal E4O03_02590 PF00288 GHMP kinases N terminal domain E4O03_02590 PF10509 Galactokinase galactose-binding signature E4O03_02600 PF01784 NIF3 (NGG1p interacting factor 3) E4O03_02615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O03_02615 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_02625 PF03553 Na+/H+ antiporter family E4O03_02640 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O03_02645 PF01177 Asp/Glu/Hydantoin racemase E4O03_02650 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O03_02650 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O03_02650 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O03_02650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O03_02650 PF10371 Domain of unknown function E4O03_02660 PF00849 RNA pseudouridylate synthase E4O03_02660 PF01479 S4 domain E4O03_02665 PF00155 Aminotransferase class I and II E4O03_02680 PF02885 Glycosyl transferase family, helical bundle domain E4O03_02680 PF00591 Glycosyl transferase family, a/b domain E4O03_02680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4O03_02685 PF17768 RecJ OB domain E4O03_02685 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4O03_02685 PF01368 DHH family E4O03_02685 PF02272 DHHA1 domain E4O03_02690 PF01476 LysM domain E4O03_02690 PF08525 Opacity-associated protein A N-terminal motif E4O03_02690 PF01551 Peptidase family M23 E4O03_02700 PF17762 HTH domain found in ParB protein E4O03_02700 PF02195 ParB-like nuclease domain E4O03_02705 PF00501 AMP-binding enzyme E4O03_02720 PF14353 CpXC protein E4O03_02730 PF01569 PAP2 superfamily E4O03_02735 PF01926 50S ribosome-binding GTPase E4O03_02735 PF12631 MnmE helical domain E4O03_02735 PF10396 GTP-binding protein TrmE N-terminus E4O03_02740 PF00654 Voltage gated chloride channel E4O03_02770 PF08241 Methyltransferase domain E4O03_02780 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_02780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4O03_02780 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O03_02790 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O03_02800 PF04298 Putative neutral zinc metallopeptidase E4O03_02805 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4O03_02805 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4O03_02805 PF01189 16S rRNA methyltransferase RsmB/F E4O03_02810 PF13302 Acetyltransferase (GNAT) domain E4O03_02815 PF08011 PD-(D/E)XK nuclease superfamily E4O03_02815 PF09820 Predicted AAA-ATPase E4O03_02825 PF00005 ABC transporter E4O03_02865 PF00707 Translation initiation factor IF-3, C-terminal domain E4O03_02865 PF05198 Translation initiation factor IF-3, N-terminal domain E4O03_02870 PF01632 Ribosomal protein L35 E4O03_02875 PF00453 Ribosomal protein L20 E4O03_02885 PF05164 Cell division protein ZapA E4O03_02890 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4O03_02900 PF01464 Transglycosylase SLT domain E4O03_02900 PF01476 LysM domain E4O03_02920 PF03781 Sulfatase-modifying factor enzyme 1 E4O03_02925 PF03313 Serine dehydratase alpha chain E4O03_02930 PF00905 Penicillin binding protein transpeptidase domain E4O03_02930 PF06832 Penicillin-Binding Protein C-terminus Family E4O03_02930 PF00912 Transglycosylase E4O03_02935 PF13808 DDE_Tnp_1-associated E4O03_02935 PF01609 Transposase DDE domain E4O03_02940 PF00326 Prolyl oligopeptidase family E4O03_02940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O03_02970 PF00005 ABC transporter E4O03_02975 PF01891 Cobalt uptake substrate-specific transmembrane region E4O03_02990 PF01850 PIN domain E4O03_03000 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4O03_03005 PF07724 AAA domain (Cdc48 subfamily) E4O03_03005 PF17871 AAA lid domain E4O03_03005 PF02861 Clp amino terminal domain, pathogenicity island component E4O03_03005 PF10431 C-terminal, D2-small domain, of ClpB protein E4O03_03005 PF00004 ATPase family associated with various cellular activities (AAA) E4O03_03010 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4O03_03020 PF02677 Epoxyqueuosine reductase QueH E4O03_03025 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4O03_03035 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O03_03040 PF03687 Uncharacterised protein family (UPF0164) E4O03_03050 PF00672 HAMP domain E4O03_03050 PF07228 Stage II sporulation protein E (SpoIIE) E4O03_03055 PF13732 Domain of unknown function (DUF4162) E4O03_03055 PF00005 ABC transporter E4O03_03075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4O03_03095 PF00270 DEAD/DEAH box helicase E4O03_03095 PF00271 Helicase conserved C-terminal domain E4O03_03105 PF01979 Amidohydrolase family E4O03_03145 PF07075 Protein of unknown function (DUF1343) E4O03_03150 PF00144 Beta-lactamase E4O03_03160 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O03_03165 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O03_03170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4O03_03170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4O03_03175 PF00448 SRP54-type protein, GTPase domain E4O03_03175 PF02881 SRP54-type protein, helical bundle domain E4O03_03175 PF02978 Signal peptide binding domain E4O03_03180 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4O03_03185 PF01176 Translation initiation factor 1A / IF-1 E4O03_03190 PF00226 DnaJ domain E4O03_03190 PF01556 DnaJ C terminal domain E4O03_03190 PF00684 DnaJ central domain E4O03_03195 PF00696 Amino acid kinase family E4O03_03200 PF00588 SpoU rRNA Methylase family E4O03_03215 PF00575 S1 RNA binding domain E4O03_03220 PF00072 Response regulator receiver domain E4O03_03220 PF00158 Sigma-54 interaction domain E4O03_03220 PF02954 Bacterial regulatory protein, Fis family E4O03_03240 PF00563 EAL domain E4O03_03240 PF00990 Diguanylate cyclase, GGDEF domain E4O03_03240 PF03707 Bacterial signalling protein N terminal repeat E4O03_03245 PF04055 Radical SAM superfamily E4O03_03270 PF01042 Endoribonuclease L-PSP E4O03_03275 PF01119 DNA mismatch repair protein, C-terminal domain E4O03_03275 PF08676 MutL C terminal dimerisation domain E4O03_03280 PF02609 Exonuclease VII small subunit E4O03_03285 PF00005 ABC transporter E4O03_03290 PF00005 ABC transporter E4O03_03300 PF04023 FeoA domain E4O03_03305 PF04023 FeoA domain E4O03_03305 PF07664 Ferrous iron transport protein B C terminus E4O03_03305 PF17910 FeoB cytosolic helical domain E4O03_03305 PF02421 Ferrous iron transport protein B E4O03_03305 PF07670 Nucleoside recognition E4O03_03350 PF00266 Aminotransferase class-V E4O03_03370 PF03781 Sulfatase-modifying factor enzyme 1 E4O03_03390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O03_03405 PF03462 PCRF domain E4O03_03405 PF00472 RF-1 domain E4O03_03420 PF00448 SRP54-type protein, GTPase domain E4O03_03420 PF02881 SRP54-type protein, helical bundle domain E4O03_03430 PF02687 FtsX-like permease family E4O03_03430 PF12704 MacB-like periplasmic core domain E4O03_03435 PF00005 ABC transporter E4O03_03445 PF02151 UvrB/uvrC motif E4O03_03450 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4O03_03455 PF10431 C-terminal, D2-small domain, of ClpB protein E4O03_03455 PF02861 Clp amino terminal domain, pathogenicity island component E4O03_03455 PF17871 AAA lid domain E4O03_03455 PF00004 ATPase family associated with various cellular activities (AAA) E4O03_03455 PF07724 AAA domain (Cdc48 subfamily) E4O03_03460 PF00483 Nucleotidyl transferase E4O03_03470 PF03330 Lytic transglycolase E4O03_03470 PF03330 Lytic transglycolase E4O03_03480 PF01026 TatD related DNase E4O03_03485 PF00691 OmpA family E4O03_03665 PF07687 Peptidase dimerisation domain E4O03_03665 PF01546 Peptidase family M20/M25/M40 E4O03_03675 PF03606 C4-dicarboxylate anaerobic carrier E4O03_03700 PF01593 Flavin containing amine oxidoreductase E4O03_03715 PF08439 Oligopeptidase F E4O03_03715 PF01432 Peptidase family M3 E4O03_03720 PF00929 Exonuclease E4O03_03725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O03_03725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O03_03725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O03_03725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O03_03730 PF01078 Magnesium chelatase, subunit ChlI E4O03_03730 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4O03_03735 PF10415 Fumarase C C-terminus E4O03_03735 PF00206 Lyase E4O03_03750 PF06733 DEAD_2 E4O03_03750 PF13307 Helicase C-terminal domain E4O03_03770 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_03770 PF00672 HAMP domain E4O03_03775 PF04773 FecR protein E4O03_03820 PF04101 Glycosyltransferase family 28 C-terminal domain E4O03_03820 PF03033 Glycosyltransferase family 28 N-terminal domain E4O03_03825 PF02674 Colicin V production protein E4O03_03830 PF09115 DNA polymerase III, delta subunit, C terminal E4O03_03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_03835 PF00512 His Kinase A (phospho-acceptor) domain E4O03_03835 PF00989 PAS fold E4O03_03840 PF00158 Sigma-54 interaction domain E4O03_03840 PF00072 Response regulator receiver domain E4O03_03840 PF02954 Bacterial regulatory protein, Fis family E4O03_03845 PF01728 FtsJ-like methyltransferase E4O03_03855 PF13180 PDZ domain E4O03_03855 PF17820 PDZ domain E4O03_03860 PF02690 Na+/Pi-cotransporter E4O03_03865 PF00009 Elongation factor Tu GTP binding domain E4O03_03865 PF03144 Elongation factor Tu domain 2 E4O03_03865 PF09105 Elongation factor SelB, winged helix E4O03_03865 PF09106 Elongation factor SelB, winged helix E4O03_03865 PF09107 Elongation factor SelB, winged helix E4O03_03880 PF12706 Beta-lactamase superfamily domain E4O03_03880 PF00753 Metallo-beta-lactamase superfamily E4O03_03885 PF02608 ABC transporter substrate-binding protein PnrA-like E4O03_03890 PF00005 ABC transporter E4O03_03895 PF02653 Branched-chain amino acid transport system / permease component E4O03_03900 PF02653 Branched-chain amino acid transport system / permease component E4O03_03930 PF00163 Ribosomal protein S4/S9 N-terminal domain E4O03_03930 PF01479 S4 domain E4O03_03960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4O03_03980 PF03484 tRNA synthetase B5 domain E4O03_03980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4O03_04000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O03_04015 PF13186 Iron-sulfur cluster-binding domain E4O03_04030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O03_04030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O03_04035 PF00465 Iron-containing alcohol dehydrogenase E4O03_04040 PF17864 RuvB AAA lid domain E4O03_04040 PF05491 RuvB C-terminal winged helix domain E4O03_04040 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O03_04045 PF10672 S-adenosylmethionine-dependent methyltransferase E4O03_04050 PF02629 CoA binding domain E4O03_04050 PF06971 Putative DNA-binding protein N-terminus E4O03_04065 PF02780 Transketolase, C-terminal domain E4O03_04065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4O03_04065 PF02779 Transketolase, pyrimidine binding domain E4O03_04070 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4O03_04080 PF01648 4'-phosphopantetheinyl transferase superfamily E4O03_04090 PF00005 ABC transporter E4O03_04095 PF00392 Bacterial regulatory proteins, gntR family E4O03_04100 PF07517 SecA DEAD-like domain E4O03_04100 PF01043 SecA preprotein cross-linking domain E4O03_04100 PF02810 SEC-C motif E4O03_04100 PF07516 SecA Wing and Scaffold domain E4O03_04105 PF00551 Formyl transferase E4O03_04110 PF01808 AICARFT/IMPCHase bienzyme E4O03_04110 PF02142 MGS-like domain E4O03_04115 PF07650 KH domain E4O03_04115 PF01926 50S ribosome-binding GTPase E4O03_04120 PF04060 Putative Fe-S cluster E4O03_04125 PF08011 PD-(D/E)XK nuclease superfamily E4O03_04125 PF09820 Predicted AAA-ATPase E4O03_04130 PF00679 Elongation factor G C-terminus E4O03_04130 PF00009 Elongation factor Tu GTP binding domain E4O03_04130 PF14492 Elongation Factor G, domain II E4O03_04130 PF06421 GTP-binding protein LepA C-terminus E4O03_04130 PF03144 Elongation factor Tu domain 2 E4O03_04135 PF05525 Branched-chain amino acid transport protein E4O03_04150 PF04055 Radical SAM superfamily E4O03_04150 PF00919 Uncharacterized protein family UPF0004 E4O03_04165 PF00232 Glycosyl hydrolase family 1 E4O03_04185 PF00005 ABC transporter E4O03_04185 PF12848 ABC transporter E4O03_04195 PF03572 Peptidase family S41 E4O03_04195 PF13180 PDZ domain E4O03_04200 PF04452 RNA methyltransferase E4O03_04225 PF08367 Peptidase M16C associated E4O03_04225 PF00675 Insulinase (Peptidase family M16) E4O03_04225 PF05193 Peptidase M16 inactive domain E4O03_04230 PF02075 Crossover junction endodeoxyribonuclease RuvC E4O03_04235 PF01330 RuvA N terminal domain E4O03_04275 PF06463 Molybdenum Cofactor Synthesis C E4O03_04275 PF04055 Radical SAM superfamily E4O03_04285 PF00005 ABC transporter E4O03_04290 PF12704 MacB-like periplasmic core domain E4O03_04290 PF02687 FtsX-like permease family E4O03_04290 PF00005 ABC transporter E4O03_04310 PF13495 Phage integrase, N-terminal SAM-like domain E4O03_04310 PF00589 Phage integrase family E4O03_04395 PF12146 Serine aminopeptidase, S33 E4O03_04605 PF13808 DDE_Tnp_1-associated E4O03_04605 PF01609 Transposase DDE domain E4O03_04630 PF01361 Tautomerase enzyme E4O03_04685 PF01209 ubiE/COQ5 methyltransferase family E4O03_04690 PF00912 Transglycosylase E4O03_04700 PF00300 Histidine phosphatase superfamily (branch 1) E4O03_04710 PF01966 HD domain E4O03_04735 PF01880 Desulfoferrodoxin E4O03_04735 PF06397 Desulfoferrodoxin, N-terminal domain E4O03_04740 PF16363 GDP-mannose 4,6 dehydratase E4O03_04750 PF04294 VanW like protein E4O03_04755 PF00829 Ribosomal prokaryotic L21 protein E4O03_04765 PF01016 Ribosomal L27 protein E4O03_04770 PF01018 GTP1/OBG E4O03_04770 PF01926 50S ribosome-binding GTPase E4O03_04775 PF01467 Cytidylyltransferase-like E4O03_04790 PF02417 Chromate transporter E4O03_04795 PF02417 Chromate transporter E4O03_04815 PF00501 AMP-binding enzyme E4O03_04825 PF00905 Penicillin binding protein transpeptidase domain E4O03_04825 PF17092 Penicillin-binding protein OB-like domain E4O03_04825 PF00912 Transglycosylase E4O03_04835 PF04225 Opacity-associated protein A LysM-like domain E4O03_04835 PF01551 Peptidase family M23 E4O03_04845 PF00037 4Fe-4S binding domain E4O03_04855 PF03372 Endonuclease/Exonuclease/phosphatase family E4O03_04860 PF00557 Metallopeptidase family M24 E4O03_04865 PF00226 DnaJ domain E4O03_04865 PF01556 DnaJ C terminal domain E4O03_04865 PF00684 DnaJ central domain E4O03_04870 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4O03_04870 PF16355 Domain of unknown function (DUF4982) E4O03_04870 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 E4O03_04870 PF00703 Glycosyl hydrolases family 2 E4O03_04870 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4O03_04895 PF12626 Polymerase A arginine-rich C-terminus E4O03_04895 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O03_04895 PF01743 Poly A polymerase head domain E4O03_04910 PF01171 PP-loop family E4O03_04910 PF00117 Glutamine amidotransferase class-I E4O03_04910 PF00958 GMP synthase C terminal domain E4O03_04920 PF00162 Phosphoglycerate kinase E4O03_04925 PF01520 N-acetylmuramoyl-L-alanine amidase E4O03_04935 PF04620 Flagellar filament outer layer protein Flaa E4O03_04945 PF01649 Ribosomal protein S20 E4O03_04950 PF00216 Bacterial DNA-binding protein E4O03_04955 PF00795 Carbon-nitrogen hydrolase E4O03_04965 PF02464 Competence-damaged protein E4O03_04965 PF18146 Damage-inducible protein CinA KH domain E4O03_04965 PF00994 Probable molybdopterin binding domain E4O03_04990 PF00300 Histidine phosphatase superfamily (branch 1) E4O03_04995 PF07364 Metallopeptidase family M81 E4O03_04995 PF07171 MlrC C-terminus E4O03_05010 PF00005 ABC transporter E4O03_05025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O03_05030 PF00563 EAL domain E4O03_05030 PF01590 GAF domain E4O03_05030 PF00990 Diguanylate cyclase, GGDEF domain E4O03_05030 PF00360 Phytochrome region E4O03_05035 PF00156 Phosphoribosyl transferase domain E4O03_05040 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O03_05040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O03_05040 PF16886 ATPsynthase alpha/beta subunit N-term extension E4O03_05045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O03_05045 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O03_05050 PF01813 ATP synthase subunit D E4O03_05065 PF01250 Ribosomal protein S6 E4O03_05070 PF00436 Single-strand binding protein family E4O03_05075 PF01084 Ribosomal protein S18 E4O03_05080 PF03948 Ribosomal protein L9, C-terminal domain E4O03_05080 PF01281 Ribosomal protein L9, N-terminal domain E4O03_05090 PF07724 AAA domain (Cdc48 subfamily) E4O03_05090 PF10431 C-terminal, D2-small domain, of ClpB protein E4O03_05090 PF06689 ClpX C4-type zinc finger E4O03_05095 PF00574 Clp protease E4O03_05100 PF05698 Bacterial trigger factor protein (TF) C-terminus E4O03_05100 PF05697 Bacterial trigger factor protein (TF) E4O03_05100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O03_05120 PF00155 Aminotransferase class I and II E4O03_05130 PF01008 Initiation factor 2 subunit family E4O03_05150 PF03796 DnaB-like helicase C terminal domain E4O03_05150 PF00772 DnaB-like helicase N terminal domain E4O03_05180 PF01411 tRNA synthetases class II (A) E4O03_05180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O03_05185 PF13145 PPIC-type PPIASE domain E4O03_05190 PF01029 NusB family E4O03_05205 PF04408 Helicase associated domain (HA2) E4O03_05205 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4O03_05205 PF00270 DEAD/DEAH box helicase E4O03_05205 PF00271 Helicase conserved C-terminal domain E4O03_05210 PF08011 PD-(D/E)XK nuclease superfamily E4O03_05210 PF09820 Predicted AAA-ATPase E4O03_05215 PF00005 ABC transporter E4O03_05215 PF00664 ABC transporter transmembrane region E4O03_05220 PF00664 ABC transporter transmembrane region E4O03_05220 PF00005 ABC transporter E4O03_05225 PF02632 BioY family E4O03_05230 PF00005 ABC transporter E4O03_05235 PF02361 Cobalt transport protein E4O03_05250 PF01327 Polypeptide deformylase E4O03_05255 PF02911 Formyl transferase, C-terminal domain E4O03_05255 PF00551 Formyl transferase E4O03_05260 PF03793 PASTA domain E4O03_05270 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4O03_05275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4O03_05275 PF01488 Shikimate / quinate 5-dehydrogenase E4O03_05275 PF08501 Shikimate dehydrogenase substrate binding domain E4O03_05285 PF01121 Dephospho-CoA kinase E4O03_05290 PF01367 5'-3' exonuclease, C-terminal SAM fold E4O03_05290 PF01612 3'-5' exonuclease E4O03_05290 PF00476 DNA polymerase family A E4O03_05290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4O03_05295 PF06857 Malonate decarboxylase delta subunit (MdcD) E4O03_05300 PF03328 HpcH/HpaI aldolase/citrate lyase family E4O03_05305 PF04223 Citrate lyase, alpha subunit (CitF) E4O03_05320 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_05320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O03_05325 PF01571 Aminomethyltransferase folate-binding domain E4O03_05325 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4O03_05330 PF01597 Glycine cleavage H-protein E4O03_05335 PF02347 Glycine cleavage system P-protein E4O03_05340 PF02347 Glycine cleavage system P-protein E4O03_05365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O03_05365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O03_05415 PF04851 Type III restriction enzyme, res subunit E4O03_05415 PF00271 Helicase conserved C-terminal domain E4O03_05420 PF00881 Nitroreductase family E4O03_05440 PF14338 Mrr N-terminal domain E4O03_05440 PF04471 Restriction endonuclease E4O03_05450 PF01888 CbiD E4O03_05455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O03_05455 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_05460 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O03_05460 PF02256 Iron hydrogenase small subunit E4O03_05460 PF00037 4Fe-4S binding domain E4O03_05460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4O03_05465 PF00005 ABC transporter E4O03_05465 PF12848 ABC transporter E4O03_05470 PF01513 ATP-NAD kinase E4O03_05480 PF01584 CheW-like domain E4O03_05485 PF00579 tRNA synthetases class I (W and Y) E4O03_05490 PF01336 OB-fold nucleic acid binding domain E4O03_05490 PF02938 GAD domain E4O03_05490 PF00152 tRNA synthetases class II (D, K and N) E4O03_05505 PF00534 Glycosyl transferases group 1 E4O03_05505 PF08323 Starch synthase catalytic domain E4O03_05540 PF00919 Uncharacterized protein family UPF0004 E4O03_05540 PF01938 TRAM domain E4O03_05540 PF04055 Radical SAM superfamily E4O03_05545 PF04055 Radical SAM superfamily E4O03_05550 PF10437 Bacterial lipoate protein ligase C-terminus E4O03_05550 PF03099 Biotin/lipoate A/B protein ligase family E4O03_05555 PF00005 ABC transporter E4O03_05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_05560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_05560 PF00005 ABC transporter E4O03_05565 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_05565 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O03_05570 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_05575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O03_05580 PF00365 Phosphofructokinase E4O03_05585 PF02132 RecR protein E4O03_05585 PF13662 Toprim domain E4O03_05590 PF02575 YbaB/EbfC DNA-binding family E4O03_05595 PF01351 Ribonuclease HII E4O03_05615 PF02618 YceG-like family E4O03_05630 PF03692 Putative zinc- or iron-chelating domain E4O03_05650 PF00533 BRCA1 C Terminus (BRCT) domain E4O03_05650 PF03120 NAD-dependent DNA ligase OB-fold domain E4O03_05650 PF01653 NAD-dependent DNA ligase adenylation domain E4O03_05660 PF00348 Polyprenyl synthetase E4O03_05670 PF13277 YmdB-like protein E4O03_05690 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4O03_05695 PF08218 Citrate lyase ligase C-terminal domain E4O03_05700 PF05681 Fumarate hydratase (Fumerase) E4O03_05700 PF05683 Fumarase C-terminus E4O03_05705 PF05681 Fumarate hydratase (Fumerase) E4O03_05725 PF00005 ABC transporter E4O03_05730 PF12704 MacB-like periplasmic core domain E4O03_05730 PF02687 FtsX-like permease family E4O03_05745 PF10634 Fe2+ transport protein E4O03_05750 PF03239 Iron permease FTR1 family E4O03_05755 PF00005 ABC transporter E4O03_05765 PF01842 ACT domain E4O03_05765 PF03315 Serine dehydratase beta chain E4O03_05770 PF03313 Serine dehydratase alpha chain E4O03_05780 PF01197 Ribosomal protein L31 E4O03_05785 PF07497 Rho termination factor, RNA-binding domain E4O03_05785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O03_05785 PF07498 Rho termination factor, N-terminal domain E4O03_05800 PF00391 PEP-utilising enzyme, mobile domain E4O03_05800 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4O03_05800 PF02896 PEP-utilising enzyme, TIM barrel domain E4O03_05810 PF00206 Lyase E4O03_05810 PF10397 Adenylosuccinate lyase C-terminus E4O03_05815 PF00072 Response regulator receiver domain E4O03_05815 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_05825 PF03781 Sulfatase-modifying factor enzyme 1 E4O03_05855 PF13525 Outer membrane lipoprotein E4O03_05865 PF02463 RecF/RecN/SMC N terminal domain E4O03_05865 PF06470 SMC proteins Flexible Hinge Domain E4O03_05875 PF00072 Response regulator receiver domain E4O03_05885 PF01584 CheW-like domain E4O03_05890 PF01584 CheW-like domain E4O03_05890 PF02895 Signal transducing histidine kinase, homodimeric domain E4O03_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_05890 PF01627 Hpt domain E4O03_05890 PF07194 P2 response regulator binding domain E4O03_05905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4O03_05905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4O03_05910 PF01709 Transcriptional regulator E4O03_05920 PF01321 Creatinase/Prolidase N-terminal domain E4O03_05920 PF00557 Metallopeptidase family M24 E4O03_05945 PF00669 Bacterial flagellin N-terminal helical region E4O03_05945 PF00700 Bacterial flagellin C-terminal helical region E4O03_05950 PF00669 Bacterial flagellin N-terminal helical region E4O03_05950 PF00700 Bacterial flagellin C-terminal helical region E4O03_05960 PF02465 Flagellar hook-associated protein 2 N-terminus E4O03_05960 PF07195 Flagellar hook-associated protein 2 C-terminus E4O03_05975 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4O03_05985 PF00672 HAMP domain E4O03_05985 PF01966 HD domain E4O03_05990 PF04055 Radical SAM superfamily E4O03_05990 PF06969 HemN C-terminal domain E4O03_05995 PF10502 Signal peptidase, peptidase S26 E4O03_06000 PF01668 SmpB protein E4O03_06010 PF01300 Telomere recombination E4O03_06030 PF01973 Protein of unknown function DUF115 E4O03_06055 PF00005 ABC transporter E4O03_06065 PF07495 Y_Y_Y domain E4O03_06065 PF00072 Response regulator receiver domain E4O03_06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_06065 PF12833 Helix-turn-helix domain E4O03_06065 PF00512 His Kinase A (phospho-acceptor) domain E4O03_06065 PF07494 Two component regulator propeller E4O03_06070 PF00072 Response regulator receiver domain E4O03_06070 PF00486 Transcriptional regulatory protein, C terminal E4O03_06080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4O03_06090 PF00488 MutS domain V E4O03_06090 PF01713 Smr domain E4O03_06095 PF03193 RsgA GTPase E4O03_06095 PF16745 RsgA N-terminal domain E4O03_06100 PF01177 Asp/Glu/Hydantoin racemase E4O03_06105 PF00005 ABC transporter E4O03_06105 PF00664 ABC transporter transmembrane region E4O03_06110 PF00005 ABC transporter E4O03_06110 PF00664 ABC transporter transmembrane region E4O03_06130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4O03_06130 PF10996 Beta-Casp domain E4O03_06130 PF00753 Metallo-beta-lactamase superfamily E4O03_06135 PF00588 SpoU rRNA Methylase family E4O03_06135 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O03_06140 PF13393 Histidyl-tRNA synthetase E4O03_06145 PF16363 GDP-mannose 4,6 dehydratase E4O03_06150 PF00483 Nucleotidyl transferase E4O03_06155 PF01370 NAD dependent epimerase/dehydratase family E4O03_06160 PF00534 Glycosyl transferases group 1 E4O03_06160 PF13439 Glycosyltransferase Family 4 E4O03_06175 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E4O03_06185 PF02096 60Kd inner membrane protein E4O03_06195 PF00535 Glycosyl transferase family 2 E4O03_06200 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E4O03_06205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O03_06230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4O03_06230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4O03_06230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4O03_06260 PF00535 Glycosyl transferase family 2 E4O03_06285 PF00005 ABC transporter E4O03_06285 PF14524 Wzt C-terminal domain E4O03_06300 PF00266 Aminotransferase class-V E4O03_06400 PF00535 Glycosyl transferase family 2 E4O03_06425 PF00005 ABC transporter E4O03_06425 PF14524 Wzt C-terminal domain E4O03_06490 PF01966 HD domain E4O03_06505 PF08239 Bacterial SH3 domain E4O03_06510 PF12848 ABC transporter E4O03_06510 PF00005 ABC transporter E4O03_06510 PF16326 ABC transporter C-terminal domain E4O03_06520 PF02540 NAD synthase E4O03_06525 PF01790 Prolipoprotein diacylglyceryl transferase E4O03_06535 PF10609 NUBPL iron-transfer P-loop NTPase E4O03_06560 PF03116 NQR2, RnfD, RnfE family E4O03_06565 PF10531 SLBB domain E4O03_06565 PF13375 RnfC Barrel sandwich hybrid domain E4O03_06565 PF13237 4Fe-4S dicluster domain E4O03_06565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O03_06595 PF00403 Heavy-metal-associated domain E4O03_06600 PF01022 Bacterial regulatory protein, arsR family E4O03_06605 PF01991 ATP synthase (E/31 kDa) subunit E4O03_06620 PF01467 Cytidylyltransferase-like E4O03_06640 PF00773 RNB domain E4O03_06645 PF01256 Carbohydrate kinase E4O03_06645 PF03853 YjeF-related protein N-terminus E4O03_06650 PF12344 Ultra-violet resistance protein B E4O03_06650 PF02151 UvrB/uvrC motif E4O03_06650 PF17757 UvrB interaction domain E4O03_06650 PF00271 Helicase conserved C-terminal domain E4O03_06650 PF04851 Type III restriction enzyme, res subunit E4O03_06655 PF00005 ABC transporter E4O03_06715 PF00005 ABC transporter E4O03_06725 PF00005 ABC transporter E4O03_06725 PF00664 ABC transporter transmembrane region E4O03_06730 PF04055 Radical SAM superfamily E4O03_06730 PF13186 Iron-sulfur cluster-binding domain E4O03_06765 PF08279 HTH domain E4O03_06765 PF13280 WYL domain E4O03_06770 PF08264 Anticodon-binding domain of tRNA E4O03_06770 PF10458 Valyl tRNA synthetase tRNA binding arm E4O03_06770 PF00133 tRNA synthetases class I (I, L, M and V) E4O03_06775 PF00860 Permease family E4O03_06785 PF01263 Aldose 1-epimerase E4O03_06800 PF01098 Cell cycle protein E4O03_06805 PF03717 Penicillin-binding Protein dimerisation domain E4O03_06805 PF00905 Penicillin binding protein transpeptidase domain E4O03_06840 PF04545 Sigma-70, region 4 E4O03_06840 PF04542 Sigma-70 region 2 E4O03_06840 PF00140 Sigma-70 factor, region 1.2 E4O03_06840 PF03979 Sigma-70 factor, region 1.1 E4O03_06840 PF04539 Sigma-70 region 3 E4O03_06845 PF08275 DNA primase catalytic core, N-terminal domain E4O03_06845 PF01807 CHC2 zinc finger E4O03_06855 PF00180 Isocitrate/isopropylmalate dehydrogenase E4O03_06865 PF13180 PDZ domain E4O03_06865 PF17820 PDZ domain E4O03_06875 PF01171 PP-loop family E4O03_06880 PF01386 Ribosomal L25p family E4O03_06880 PF14693 Ribosomal protein TL5, C-terminal domain E4O03_06890 PF04026 SpoVG E4O03_06895 PF08544 GHMP kinases C terminal E4O03_06895 PF00288 GHMP kinases N terminal domain E4O03_06905 PF03062 MBOAT, membrane-bound O-acyltransferase family E4O03_06915 PF01145 SPFH domain / Band 7 family E4O03_06920 PF01145 SPFH domain / Band 7 family E4O03_06930 PF03477 ATP cone domain E4O03_06955 PF09186 Domain of unknown function (DUF1949) E4O03_06955 PF01205 Uncharacterized protein family UPF0029 E4O03_06985 PF00905 Penicillin binding protein transpeptidase domain E4O03_06985 PF03717 Penicillin-binding Protein dimerisation domain E4O03_06995 PF05872 Bacterial protein of unknown function (DUF853) E4O03_07000 PF00664 ABC transporter transmembrane region E4O03_07000 PF00005 ABC transporter E4O03_07000 PF03412 Peptidase C39 family E4O03_07010 PF01523 Putative modulator of DNA gyrase E4O03_07015 PF02779 Transketolase, pyrimidine binding domain E4O03_07015 PF00456 Transketolase, thiamine diphosphate binding domain E4O03_07035 PF02463 RecF/RecN/SMC N terminal domain E4O03_07055 PF01476 LysM domain E4O03_07055 PF00877 NlpC/P60 family E4O03_07065 PF07475 HPr Serine kinase C-terminal domain E4O03_07065 PF02603 HPr Serine kinase N terminus E4O03_07070 PF00381 PTS HPr component phosphorylation site E4O03_07075 PF01523 Putative modulator of DNA gyrase E4O03_07080 PF01523 Putative modulator of DNA gyrase E4O03_07100 PF00005 ABC transporter E4O03_07105 PF03461 TRCF domain E4O03_07105 PF00271 Helicase conserved C-terminal domain E4O03_07105 PF00270 DEAD/DEAH box helicase E4O03_07105 PF02559 CarD-like/TRCF domain E4O03_07105 PF17757 UvrB interaction domain E4O03_07120 PF02743 Cache domain E4O03_07120 PF00672 HAMP domain E4O03_07120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_07230 PF00586 AIR synthase related protein, N-terminal domain E4O03_07230 PF02769 AIR synthase related protein, C-terminal domain E4O03_07230 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4O03_07235 PF04260 Protein of unknown function (DUF436) E4O03_07240 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O03_07240 PF02256 Iron hydrogenase small subunit E4O03_07240 PF12838 4Fe-4S dicluster domain E4O03_07250 PF06044 Dam-replacing family E4O03_07250 PF17726 Dam-replacing HTH domain E4O03_07255 PF02844 Phosphoribosylglycinamide synthetase, N domain E4O03_07255 PF02843 Phosphoribosylglycinamide synthetase, C domain E4O03_07255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4O03_07260 PF02769 AIR synthase related protein, C-terminal domain E4O03_07260 PF00586 AIR synthase related protein, N-terminal domain E4O03_07265 PF04551 GcpE protein E4O03_07280 PF02028 BCCT, betaine/carnitine/choline family transporter E4O03_07285 PF12804 MobA-like NTP transferase domain E4O03_07290 PF01235 Sodium:alanine symporter family E4O03_07305 PF01966 HD domain E4O03_07305 PF00072 Response regulator receiver domain E4O03_07310 PF00488 MutS domain V E4O03_07310 PF01713 Smr domain E4O03_07330 PF00092 von Willebrand factor type A domain E4O03_07340 PF01882 Protein of unknown function DUF58 E4O03_07355 PF00571 CBS domain E4O03_07355 PF03471 Transporter associated domain E4O03_07360 PF02130 Uncharacterized protein family UPF0054 E4O03_07365 PF07697 7TM-HD extracellular E4O03_07365 PF07698 7TM receptor with intracellular HD hydrolase E4O03_07365 PF01966 HD domain E4O03_07370 PF02562 PhoH-like protein E4O03_07385 PF00121 Triosephosphate isomerase E4O03_07410 PF00753 Metallo-beta-lactamase superfamily E4O03_07425 PF10282 Lactonase, 7-bladed beta-propeller E4O03_07430 PF01297 Zinc-uptake complex component A periplasmic E4O03_07435 PF00005 ABC transporter E4O03_07440 PF00950 ABC 3 transport family E4O03_07445 PF00950 ABC 3 transport family E4O03_07455 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O03_07470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O03_07470 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O03_07470 PF18269 T3SS EscN ATPase C-terminal domain E4O03_07475 PF02108 Flagellar assembly protein FliH E4O03_07480 PF01706 FliG C-terminal domain E4O03_07480 PF14841 FliG middle domain E4O03_07480 PF14842 FliG N-terminal domain E4O03_07485 PF01514 Secretory protein of YscJ/FliF family E4O03_07485 PF08345 Flagellar M-ring protein C-terminal E4O03_07490 PF02049 Flagellar hook-basal body complex protein FliE E4O03_07495 PF00460 Flagella basal body rod protein E4O03_07495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O03_07500 PF00460 Flagella basal body rod protein E4O03_07505 PF07724 AAA domain (Cdc48 subfamily) E4O03_07505 PF00004 ATPase family associated with various cellular activities (AAA) E4O03_07510 PF00227 Proteasome subunit E4O03_07515 PF02899 Phage integrase, N-terminal SAM-like domain E4O03_07515 PF00589 Phage integrase family E4O03_07520 PF01131 DNA topoisomerase E4O03_07520 PF01751 Toprim domain E4O03_07520 PF01396 Topoisomerase DNA binding C4 zinc finger E4O03_07525 PF17782 DprA winged helix domain E4O03_07525 PF02481 DNA recombination-mediator protein A E4O03_07535 PF02899 Phage integrase, N-terminal SAM-like domain E4O03_07535 PF00589 Phage integrase family E4O03_07540 PF12327 FtsZ family, C-terminal domain E4O03_07540 PF00091 Tubulin/FtsZ family, GTPase domain E4O03_07545 PF02491 SHS2 domain inserted in FTSA E4O03_07555 PF01098 Cell cycle protein E4O03_07560 PF08245 Mur ligase middle domain E4O03_07560 PF02875 Mur ligase family, glutamate ligase domain E4O03_07560 PF01225 Mur ligase family, catalytic domain E4O03_07570 PF01795 MraW methylase family E4O03_07575 PF02381 MraZ protein, putative antitoxin-like E4O03_07580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O03_07580 PF00326 Prolyl oligopeptidase family E4O03_07615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4O03_07615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4O03_07615 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4O03_07625 PF02233 NAD(P) transhydrogenase beta subunit E4O03_07640 PF00118 TCP-1/cpn60 chaperonin family E4O03_07655 PF02899 Phage integrase, N-terminal SAM-like domain E4O03_07655 PF00589 Phage integrase family E4O03_07710 PF17762 HTH domain found in ParB protein E4O03_07710 PF02195 ParB-like nuclease domain E4O03_07745 PF01555 DNA methylase E4O03_07845 PF01264 Chorismate synthase E4O03_07850 PF02390 Putative methyltransferase E4O03_07890 PF01740 STAS domain E4O03_07910 PF01212 Beta-eliminating lyase E4O03_07935 PF16325 Peptidase family U32 C-terminal domain E4O03_07935 PF01136 Peptidase family U32 E4O03_07940 PF07859 alpha/beta hydrolase fold E4O03_07945 PF00005 ABC transporter E4O03_07945 PF00664 ABC transporter transmembrane region E4O03_07950 PF01725 Ham1 family E4O03_07960 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4O03_07965 PF01416 tRNA pseudouridine synthase E4O03_07975 PF02146 Sir2 family E4O03_07980 PF08668 HDOD domain E4O03_07995 PF00152 tRNA synthetases class II (D, K and N) E4O03_08000 PF00005 ABC transporter E4O03_08000 PF12704 MacB-like periplasmic core domain E4O03_08000 PF02687 FtsX-like permease family E4O03_08005 PF00005 ABC transporter E4O03_08020 PF08011 PD-(D/E)XK nuclease superfamily E4O03_08020 PF09820 Predicted AAA-ATPase E4O03_08025 PF00665 Integrase core domain E4O03_08025 PF13333 Integrase core domain E4O03_08025 PF13276 HTH-like domain E4O03_08035 PF05191 Adenylate kinase, active site lid E4O03_08050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4O03_08050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4O03_08055 PF17384 RimP C-terminal SH3 domain E4O03_08055 PF02576 RimP N-terminal domain E4O03_08060 PF00575 S1 RNA binding domain E4O03_08060 PF13184 NusA-like KH domain E4O03_08060 PF08529 NusA N-terminal domain E4O03_08065 PF04760 Translation initiation factor IF-2, N-terminal region E4O03_08065 PF11987 Translation-initiation factor 2 E4O03_08065 PF00009 Elongation factor Tu GTP binding domain E4O03_08070 PF02033 Ribosome-binding factor A E4O03_08075 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4O03_08105 PF02401 LytB protein E4O03_08110 PF00842 Alanine racemase, C-terminal domain E4O03_08110 PF01168 Alanine racemase, N-terminal domain E4O03_08120 PF16258 Domain of unknown function (DUF4912) E4O03_08135 PF03129 Anticodon binding domain E4O03_08135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O03_08135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O03_08155 PF08340 Domain of unknown function (DUF1732) E4O03_08155 PF03755 YicC-like family, N-terminal region E4O03_08160 PF01225 Mur ligase family, catalytic domain E4O03_08160 PF02875 Mur ligase family, glutamate ligase domain E4O03_08160 PF08245 Mur ligase middle domain E4O03_08165 PF02875 Mur ligase family, glutamate ligase domain E4O03_08165 PF08245 Mur ligase middle domain E4O03_08170 PF01479 S4 domain E4O03_08170 PF00849 RNA pseudouridylate synthase E4O03_08175 PF00849 RNA pseudouridylate synthase E4O03_08185 PF00398 Ribosomal RNA adenine dimethylase E4O03_08190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4O03_08195 PF00753 Metallo-beta-lactamase superfamily E4O03_08195 PF01613 Flavin reductase like domain E4O03_08200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_08200 PF00005 ABC transporter E4O03_08205 PF00005 ABC transporter E4O03_08205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_08210 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_08210 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O03_08215 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_08225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O03_08230 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_08235 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_08235 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O03_08240 PF00005 ABC transporter E4O03_08240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_08245 PF00005 ABC transporter E4O03_08245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_08255 PF09334 tRNA synthetases class I (M) E4O03_08255 PF01588 Putative tRNA binding domain E4O03_08265 PF00005 ABC transporter E4O03_08270 PF00005 ABC transporter E4O03_08280 PF03781 Sulfatase-modifying factor enzyme 1 E4O03_08290 PF09820 Predicted AAA-ATPase E4O03_08290 PF08011 PD-(D/E)XK nuclease superfamily E4O03_08295 PF01554 MatE E4O03_08300 PF00005 ABC transporter E4O03_08300 PF00664 ABC transporter transmembrane region E4O03_08305 PF00005 ABC transporter E4O03_08305 PF00664 ABC transporter transmembrane region E4O03_08310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_08310 PF00672 HAMP domain E4O03_08310 PF02743 Cache domain E4O03_08315 PF03553 Na+/H+ antiporter family E4O03_08320 PF00155 Aminotransferase class I and II E4O03_08325 PF02954 Bacterial regulatory protein, Fis family E4O03_08325 PF13426 PAS domain E4O03_08325 PF00158 Sigma-54 interaction domain E4O03_08335 PF00301 Rubredoxin E4O03_08350 PF00679 Elongation factor G C-terminus E4O03_08350 PF03144 Elongation factor Tu domain 2 E4O03_08350 PF00009 Elongation factor Tu GTP binding domain E4O03_08350 PF03764 Elongation factor G, domain IV E4O03_08350 PF14492 Elongation Factor G, domain II E4O03_08355 PF00177 Ribosomal protein S7p/S5e E4O03_08360 PF00164 Ribosomal protein S12/S23 E4O03_08365 PF11756 Nitrous oxide-stimulated promoter E4O03_08370 PF04304 Protein of unknown function (DUF454) E4O03_08385 PF00692 dUTPase E4O03_08390 PF00575 S1 RNA binding domain E4O03_08390 PF00013 KH domain E4O03_08390 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4O03_08390 PF01138 3' exoribonuclease family, domain 1 E4O03_08390 PF03725 3' exoribonuclease family, domain 2 E4O03_08395 PF00312 Ribosomal protein S15 E4O03_08400 PF06574 FAD synthetase E4O03_08400 PF01687 Riboflavin kinase E4O03_08405 PF02719 Polysaccharide biosynthesis protein E4O03_08410 PF01544 CorA-like Mg2+ transporter protein E4O03_08415 PF01743 Poly A polymerase head domain E4O03_08415 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O03_08415 PF13735 tRNA nucleotidyltransferase domain 2 putative E4O03_08430 PF00011 Hsp20/alpha crystallin family E4O03_08435 PF14622 Ribonuclease-III-like E4O03_08435 PF00035 Double-stranded RNA binding motif E4O03_08440 PF00550 Phosphopantetheine attachment site E4O03_08445 PF01783 Ribosomal L32p protein family E4O03_08450 PF13941 MutL protein E4O03_08455 PF02310 B12 binding domain E4O03_08460 PF00375 Sodium:dicarboxylate symporter family E4O03_08465 PF01177 Asp/Glu/Hydantoin racemase E4O03_08470 PF01212 Beta-eliminating lyase E4O03_08475 PF05034 Methylaspartate ammonia-lyase N-terminus E4O03_08475 PF07476 Methylaspartate ammonia-lyase C-terminus E4O03_08485 PF16811 TRAP transporter T-component E4O03_08495 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E4O03_08495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4O03_08505 PF13742 OB-fold nucleic acid binding domain E4O03_08505 PF02601 Exonuclease VII, large subunit E4O03_08510 PF13654 AAA domain E4O03_08510 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O03_08535 PF16921 Tex protein YqgF-like domain E4O03_08535 PF09371 Tex-like protein N-terminal domain E4O03_08535 PF00575 S1 RNA binding domain E4O03_08535 PF17674 HHH domain E4O03_08545 PF00005 ABC transporter E4O03_08545 PF17755 UvrA DNA-binding domain E4O03_08545 PF17760 UvrA interaction domain E4O03_08550 PF02743 Cache domain E4O03_08550 PF00672 HAMP domain E4O03_08550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_08555 PF10135 Rod binding protein E4O03_08560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O03_08560 PF00460 Flagella basal body rod protein E4O03_08565 PF00460 Flagella basal body rod protein E4O03_08565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O03_08570 PF00669 Bacterial flagellin N-terminal helical region E4O03_08570 PF00700 Bacterial flagellin C-terminal helical region E4O03_08580 PF00156 Phosphoribosyl transferase domain E4O03_08585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4O03_08585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4O03_08590 PF01226 Formate/nitrite transporter E4O03_08595 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4O03_08595 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4O03_08600 PF01204 Trehalase E4O03_08615 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4O03_08625 PF00830 Ribosomal L28 family E4O03_08630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O03_08635 PF00005 ABC transporter E4O03_08635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_08640 PF00005 ABC transporter E4O03_08640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_08645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O03_08650 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O03_08650 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_08655 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_08660 PF01180 Dihydroorotate dehydrogenase E4O03_08670 PF00152 tRNA synthetases class II (D, K and N) E4O03_08670 PF01336 OB-fold nucleic acid binding domain E4O03_08675 PF00768 D-alanyl-D-alanine carboxypeptidase E4O03_08675 PF07943 Penicillin-binding protein 5, C-terminal domain E4O03_08680 PF04002 RadC-like JAB domain E4O03_08685 PF00156 Phosphoribosyl transferase domain E4O03_08690 PF00750 tRNA synthetases class I (R) E4O03_08690 PF05746 DALR anticodon binding domain E4O03_08690 PF03485 Arginyl tRNA synthetase N terminal domain E4O03_08695 PF08207 Elongation factor P (EF-P) KOW-like domain E4O03_08695 PF01132 Elongation factor P (EF-P) OB domain E4O03_08695 PF09285 Elongation factor P, C-terminal E4O03_08710 PF13277 YmdB-like protein E4O03_08720 PF00817 impB/mucB/samB family E4O03_08720 PF11799 impB/mucB/samB family C-terminal domain E4O03_08720 PF11798 IMS family HHH motif E4O03_08735 PF03102 NeuB family E4O03_08735 PF08666 SAF domain E4O03_08740 PF00563 EAL domain E4O03_08740 PF12792 CSS motif domain associated with EAL E4O03_08745 PF07009 NusG domain II E4O03_08755 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O03_08760 PF04011 LemA family E4O03_08770 PF02653 Branched-chain amino acid transport system / permease component E4O03_08775 PF02653 Branched-chain amino acid transport system / permease component E4O03_08780 PF00005 ABC transporter E4O03_08785 PF02608 ABC transporter substrate-binding protein PnrA-like E4O03_08870 PF05598 Transposase domain (DUF772) E4O03_08870 PF01609 Transposase DDE domain E4O03_08955 PF01609 Transposase DDE domain E4O03_08955 PF13808 DDE_Tnp_1-associated E4O03_08965 PF00574 Clp protease E4O03_08970 PF03186 CobD/Cbib protein E4O03_08980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4O03_08990 PF14804 Jag N-terminus E4O03_08990 PF01424 R3H domain E4O03_08995 PF02096 60Kd inner membrane protein E4O03_08995 PF14849 YidC periplasmic domain E4O03_09000 PF01809 Putative membrane protein insertion efficiency factor E4O03_09005 PF00825 Ribonuclease P E4O03_09010 PF00468 Ribosomal protein L34 E4O03_09020 PF01370 NAD dependent epimerase/dehydratase family E4O03_09030 PF00753 Metallo-beta-lactamase superfamily E4O03_09035 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4O03_09035 PF04963 Sigma-54 factor, core binding domain E4O03_09035 PF04552 Sigma-54, DNA binding domain E4O03_09060 PF13537 Glutamine amidotransferase domain E4O03_09060 PF00156 Phosphoribosyl transferase domain E4O03_09070 PF08011 PD-(D/E)XK nuclease superfamily E4O03_09070 PF09820 Predicted AAA-ATPase E4O03_09085 PF00155 Aminotransferase class I and II E4O03_09105 PF00343 Carbohydrate phosphorylase E4O03_09135 PF00623 RNA polymerase Rpb1, domain 2 E4O03_09135 PF04998 RNA polymerase Rpb1, domain 5 E4O03_09135 PF04997 RNA polymerase Rpb1, domain 1 E4O03_09135 PF04983 RNA polymerase Rpb1, domain 3 E4O03_09135 PF05000 RNA polymerase Rpb1, domain 4 E4O03_09140 PF04561 RNA polymerase Rpb2, domain 2 E4O03_09140 PF04565 RNA polymerase Rpb2, domain 3 E4O03_09140 PF10385 RNA polymerase beta subunit external 1 domain E4O03_09140 PF00562 RNA polymerase Rpb2, domain 6 E4O03_09140 PF04560 RNA polymerase Rpb2, domain 7 E4O03_09140 PF04563 RNA polymerase beta subunit E4O03_09145 PF00542 Ribosomal protein L7/L12 C-terminal domain E4O03_09145 PF16320 Ribosomal protein L7/L12 dimerisation domain E4O03_09150 PF00466 Ribosomal protein L10 E4O03_09155 PF00687 Ribosomal protein L1p/L10e family E4O03_09160 PF03946 Ribosomal protein L11, N-terminal domain E4O03_09160 PF00298 Ribosomal protein L11, RNA binding domain E4O03_09165 PF02357 Transcription termination factor nusG E4O03_09165 PF00467 KOW motif E4O03_09170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4O03_09180 PF00471 Ribosomal protein L33 E4O03_09200 PF00664 ABC transporter transmembrane region E4O03_09200 PF00005 ABC transporter E4O03_09200 PF03412 Peptidase C39 family E4O03_09205 PF12390 Selenocysteine synthase N terminal E4O03_09205 PF03841 L-seryl-tRNA selenium transferase E4O03_09210 PF08011 PD-(D/E)XK nuclease superfamily E4O03_09210 PF09820 Predicted AAA-ATPase E4O03_09215 PF02151 UvrB/uvrC motif E4O03_09215 PF08459 UvrC Helix-hairpin-helix N-terminal E4O03_09215 PF01541 GIY-YIG catalytic domain E4O03_09225 PF01609 Transposase DDE domain E4O03_09225 PF05598 Transposase domain (DUF772) E4O03_09270 PF00183 Hsp90 protein E4O03_09275 PF03949 Malic enzyme, NAD binding domain E4O03_09275 PF00390 Malic enzyme, N-terminal domain E4O03_09280 PF01202 Shikimate kinase E4O03_09290 PF09820 Predicted AAA-ATPase E4O03_09290 PF08011 PD-(D/E)XK nuclease superfamily E4O03_09295 PF01871 AMMECR1 E4O03_09295 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4O03_09300 PF12796 Ankyrin repeats (3 copies) E4O03_09305 PF02547 Queuosine biosynthesis protein E4O03_09310 PF09820 Predicted AAA-ATPase E4O03_09310 PF08011 PD-(D/E)XK nuclease superfamily E4O03_09330 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O03_09330 PF00440 Bacterial regulatory proteins, tetR family E4O03_09335 PF00005 ABC transporter E4O03_09350 PF00440 Bacterial regulatory proteins, tetR family E4O03_09370 PF00005 ABC transporter E4O03_09370 PF00664 ABC transporter transmembrane region E4O03_09375 PF00266 Aminotransferase class-V E4O03_09395 PF01206 Sulfurtransferase TusA E4O03_09410 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4O03_09410 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4O03_09410 PF02772 S-adenosylmethionine synthetase, central domain E4O03_09420 PF01165 Ribosomal protein S21 E4O03_09425 PF01554 MatE E4O03_09430 PF00696 Amino acid kinase family E4O03_09470 PF07885 Ion channel E4O03_09470 PF02254 TrkA-N domain E4O03_09475 PF05343 M42 glutamyl aminopeptidase E4O03_09480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_09480 PF00672 HAMP domain E4O03_09480 PF02743 Cache domain E4O03_09515 PF05175 Methyltransferase small domain E4O03_09515 PF17827 PrmC N-terminal domain E4O03_09520 PF00472 RF-1 domain E4O03_09520 PF03462 PCRF domain E4O03_09550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4O03_09550 PF18074 Primosomal protein N C-terminal domain E4O03_09550 PF00270 DEAD/DEAH box helicase E4O03_09550 PF00271 Helicase conserved C-terminal domain E4O03_09550 PF17764 3′ DNA-binding domain (3′BD) E4O03_09555 PF03167 Uracil DNA glycosylase superfamily E4O03_09565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_09565 PF00672 HAMP domain E4O03_09565 PF02743 Cache domain E4O03_09575 PF08241 Methyltransferase domain E4O03_09585 PF00072 Response regulator receiver domain E4O03_09585 PF00486 Transcriptional regulatory protein, C terminal E4O03_09590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4O03_09590 PF01627 Hpt domain E4O03_09590 PF00512 His Kinase A (phospho-acceptor) domain E4O03_09590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_09590 PF00672 HAMP domain E4O03_09590 PF00072 Response regulator receiver domain E4O03_09605 PF00814 Glycoprotease family E4O03_09625 PF00171 Aldehyde dehydrogenase family E4O03_09630 PF02527 rRNA small subunit methyltransferase G E4O03_09640 PF03781 Sulfatase-modifying factor enzyme 1 E4O03_09665 PF18073 Rubredoxin metal binding domain E4O03_09665 PF06745 KaiC E4O03_09670 PF10609 NUBPL iron-transfer P-loop NTPase E4O03_09675 PF08011 PD-(D/E)XK nuclease superfamily E4O03_09675 PF09820 Predicted AAA-ATPase E4O03_09695 PF00664 ABC transporter transmembrane region E4O03_09695 PF00005 ABC transporter E4O03_09700 PF00005 ABC transporter E4O03_09705 PF01973 Protein of unknown function DUF115 E4O03_09735 PF00149 Calcineurin-like phosphoesterase E4O03_09740 PF09820 Predicted AAA-ATPase E4O03_09740 PF08011 PD-(D/E)XK nuclease superfamily E4O03_09745 PF04055 Radical SAM superfamily E4O03_09770 PF00730 HhH-GPD superfamily base excision DNA repair protein E4O03_09775 PF00391 PEP-utilising enzyme, mobile domain E4O03_09775 PF00224 Pyruvate kinase, barrel domain E4O03_09775 PF02887 Pyruvate kinase, alpha/beta domain E4O03_09815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O03_09815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O03_09830 PF00664 ABC transporter transmembrane region E4O03_09830 PF00005 ABC transporter E4O03_09835 PF01921 tRNA synthetases class I (K) E4O03_09840 PF01430 Hsp33 protein E4O03_09845 PF02570 Precorrin-8X methylmutase E4O03_09850 PF08011 PD-(D/E)XK nuclease superfamily E4O03_09850 PF09820 Predicted AAA-ATPase E4O03_09855 PF00005 ABC transporter E4O03_09855 PF00664 ABC transporter transmembrane region E4O03_09860 PF00664 ABC transporter transmembrane region E4O03_09860 PF00005 ABC transporter E4O03_09875 PF00005 ABC transporter E4O03_09880 PF00950 ABC 3 transport family E4O03_09890 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4O03_09910 PF02926 THUMP domain E4O03_09910 PF02568 Thiamine biosynthesis protein (ThiI) E4O03_09915 PF00793 DAHP synthetase I family E4O03_09920 PF02229 Transcriptional Coactivator p15 (PC4) E4O03_09925 PF01066 CDP-alcohol phosphatidyltransferase E4O03_09930 PF00342 Phosphoglucose isomerase E4O03_09935 PF01926 50S ribosome-binding GTPase E4O03_09945 PF00849 RNA pseudouridylate synthase E4O03_09965 PF00270 DEAD/DEAH box helicase E4O03_09965 PF17191 RecG wedge domain E4O03_09965 PF00271 Helicase conserved C-terminal domain E4O03_09970 PF00990 Diguanylate cyclase, GGDEF domain E4O03_09975 PF00990 Diguanylate cyclase, GGDEF domain E4O03_09975 PF00072 Response regulator receiver domain E4O03_09990 PF03577 Peptidase family C69 E4O03_09995 PF12729 Four helix bundle sensory module for signal transduction E4O03_09995 PF00672 HAMP domain E4O03_09995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_10000 PF12169 DNA polymerase III subunits gamma and tau domain III E4O03_10015 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O03_10025 PF03880 DbpA RNA binding domain E4O03_10030 PF06505 Activator of aromatic catabolism E4O03_10030 PF02830 V4R domain E4O03_10030 PF00158 Sigma-54 interaction domain E4O03_10030 PF02954 Bacterial regulatory protein, Fis family E4O03_10050 PF00834 Ribulose-phosphate 3 epimerase family E4O03_10060 PF02223 Thymidylate kinase E4O03_10070 PF01103 Surface antigen E4O03_10070 PF07244 Surface antigen variable number repeat E4O03_10080 PF01624 MutS domain I E4O03_10080 PF05192 MutS domain III E4O03_10080 PF05190 MutS family domain IV E4O03_10080 PF00488 MutS domain V E4O03_10080 PF05188 MutS domain II E4O03_10095 PF13635 Domain of unknown function (DUF4143) E4O03_10095 PF13173 AAA domain E4O03_10105 PF07670 Nucleoside recognition E4O03_10110 PF01906 Putative heavy-metal-binding E4O03_10115 PF01175 Urocanase Rossmann-like domain E4O03_10115 PF17391 Urocanase N-terminal domain E4O03_10115 PF17392 Urocanase C-terminal domain E4O03_10120 PF13649 Methyltransferase domain E4O03_10125 PF00672 HAMP domain E4O03_10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_10125 PF02743 Cache domain E4O03_10145 PF18693 TRAM domain E4O03_10145 PF04055 Radical SAM superfamily E4O03_10145 PF00919 Uncharacterized protein family UPF0004 E4O03_10165 PF02424 ApbE family E4O03_10170 PF01252 Signal peptidase (SPase) II E4O03_10175 PF13545 Crp-like helix-turn-helix domain E4O03_10175 PF00027 Cyclic nucleotide-binding domain E4O03_10185 PF02811 PHP domain E4O03_10190 PF05958 tRNA (Uracil-5-)-methyltransferase E4O03_10210 PF08439 Oligopeptidase F E4O03_10210 PF01432 Peptidase family M3 E4O03_10220 PF02661 Fic/DOC family E4O03_10220 PF12728 Helix-turn-helix domain E4O03_10230 PF01266 FAD dependent oxidoreductase E4O03_10235 PF04324 BFD-like [2Fe-2S] binding domain E4O03_10235 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_10245 PF00571 CBS domain E4O03_10245 PF00005 ABC transporter E4O03_10270 PF07702 UTRA domain E4O03_10270 PF00392 Bacterial regulatory proteins, gntR family E4O03_10280 PF06180 Cobalt chelatase (CbiK) E4O03_10285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O03_10290 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O03_10290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E4O03_10295 PF11849 Domain of unknown function (DUF3369) E4O03_10315 PF08264 Anticodon-binding domain of tRNA E4O03_10315 PF00133 tRNA synthetases class I (I, L, M and V) E4O03_10320 PF00571 CBS domain E4O03_10320 PF00478 IMP dehydrogenase / GMP reductase domain E4O03_10335 PF00464 Serine hydroxymethyltransferase E4O03_10340 PF01066 CDP-alcohol phosphatidyltransferase E4O03_10345 PF00953 Glycosyl transferase family 4 E4O03_10375 PF00291 Pyridoxal-phosphate dependent enzyme E4O03_10375 PF14821 Threonine synthase N terminus E4O03_10410 PF04545 Sigma-70, region 4 E4O03_10410 PF04539 Sigma-70 region 3 E4O03_10410 PF04542 Sigma-70 region 2 E4O03_10420 PF10609 NUBPL iron-transfer P-loop NTPase E4O03_10425 PF00448 SRP54-type protein, GTPase domain E4O03_10430 PF00155 Aminotransferase class I and II E4O03_10435 PF00117 Glutamine amidotransferase class-I E4O03_10435 PF06418 CTP synthase N-terminus E4O03_10465 PF01609 Transposase DDE domain E4O03_10465 PF13808 DDE_Tnp_1-associated E4O03_10475 PF00691 OmpA family E4O03_10490 PF08279 HTH domain E4O03_10490 PF13280 WYL domain E4O03_10505 PF00005 ABC transporter E4O03_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_10515 PF00486 Transcriptional regulatory protein, C terminal E4O03_10515 PF00072 Response regulator receiver domain E4O03_10520 PF03030 Inorganic H+ pyrophosphatase E4O03_10540 PF00072 Response regulator receiver domain E4O03_10540 PF01339 CheB methylesterase E4O03_10545 PF03705 CheR methyltransferase, all-alpha domain E4O03_10545 PF01739 CheR methyltransferase, SAM binding domain E4O03_10560 PF00005 ABC transporter E4O03_10560 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O03_10565 PF01195 Peptidyl-tRNA hydrolase E4O03_10575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O03_10580 PF02743 Cache domain E4O03_10580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_10580 PF00672 HAMP domain E4O03_10585 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_10590 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_10590 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O03_10595 PF00005 ABC transporter E4O03_10595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_10600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_10600 PF00005 ABC transporter E4O03_10605 PF01545 Cation efflux family E4O03_10605 PF16916 Dimerisation domain of Zinc Transporter E4O03_10610 PF02557 D-alanyl-D-alanine carboxypeptidase E4O03_10630 PF01556 DnaJ C terminal domain E4O03_10630 PF00684 DnaJ central domain E4O03_10630 PF00226 DnaJ domain E4O03_10635 PF00012 Hsp70 protein E4O03_10640 PF01025 GrpE E4O03_10645 PF02661 Fic/DOC family E4O03_10645 PF12728 Helix-turn-helix domain E4O03_10655 PF00005 ABC transporter E4O03_10660 PF02571 Precorrin-6x reductase CbiJ/CobK E4O03_10665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O03_10665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4O03_10670 PF08011 PD-(D/E)XK nuclease superfamily E4O03_10670 PF09820 Predicted AAA-ATPase E4O03_10680 PF01554 MatE E4O03_10700 PF11760 Cobalamin synthesis G N-terminal E4O03_10700 PF01890 Cobalamin synthesis G C-terminus E4O03_10700 PF11761 Cobalamin biosynthesis central region E4O03_10705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O03_10710 PF00664 ABC transporter transmembrane region E4O03_10710 PF00005 ABC transporter E4O03_10715 PF12848 ABC transporter E4O03_10715 PF16326 ABC transporter C-terminal domain E4O03_10715 PF00005 ABC transporter E4O03_10725 PF13614 AAA domain E4O03_10730 PF02195 ParB-like nuclease domain E4O03_10730 PF17762 HTH domain found in ParB protein E4O03_10750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O03_10750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4O03_10755 PF00698 Acyl transferase domain E4O03_10770 PF01555 DNA methylase E4O03_10775 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4O03_10775 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4O03_10775 PF07055 Enoyl reductase FAD binding domain E4O03_10780 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O03_10780 PF17191 RecG wedge domain E4O03_10780 PF00270 DEAD/DEAH box helicase E4O03_10785 PF00364 Biotin-requiring enzyme E4O03_10790 PF02785 Biotin carboxylase C-terminal domain E4O03_10790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4O03_10790 PF00289 Biotin carboxylase, N-terminal domain E4O03_10795 PF01039 Carboxyl transferase domain E4O03_10800 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4O03_10805 PF00221 Aromatic amino acid lyase E4O03_10820 PF03773 Predicted permease E4O03_10825 PF09323 Domain of unknown function (DUF1980) E4O03_10830 PF17863 AAA lid domain E4O03_10830 PF07726 ATPase family associated with various cellular activities (AAA) E4O03_10870 PF01425 Amidase E4O03_10875 PF02637 GatB domain E4O03_10875 PF02934 GatB/GatE catalytic domain E4O03_11105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4O03_11110 PF00005 ABC transporter E4O03_11150 PF03063 Prismane/CO dehydrogenase family E4O03_11165 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O03_11170 PF00005 ABC transporter E4O03_11170 PF02687 FtsX-like permease family E4O03_11170 PF12704 MacB-like periplasmic core domain E4O03_11180 PF03781 Sulfatase-modifying factor enzyme 1 E4O03_11210 PF01434 Peptidase family M41 E4O03_11210 PF17862 AAA+ lid domain E4O03_11210 PF00004 ATPase family associated with various cellular activities (AAA) E4O03_11245 PF01048 Phosphorylase superfamily E4O03_11250 PF00571 CBS domain E4O03_11250 PF03471 Transporter associated domain E4O03_11250 PF01595 Cyclin M transmembrane N-terminal domain E4O03_11255 PF02743 Cache domain E4O03_11255 PF00672 HAMP domain E4O03_11255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_11260 PF12671 Putative amidase domain E4O03_11270 PF01680 SOR/SNZ family E4O03_11275 PF10509 Galactokinase galactose-binding signature E4O03_11275 PF08544 GHMP kinases C terminal E4O03_11275 PF00288 GHMP kinases N terminal domain E4O03_11280 PF01171 PP-loop family E4O03_11300 PF07687 Peptidase dimerisation domain E4O03_11300 PF01546 Peptidase family M20/M25/M40 E4O03_11305 PF00210 Ferritin-like domain E4O03_11310 PF01791 DeoC/LacD family aldolase E4O03_11325 PF07722 Peptidase C26 E4O03_11335 PF00005 ABC transporter E4O03_11370 PF00069 Protein kinase domain E4O03_11375 PF00005 ABC transporter E4O03_11380 PF00005 ABC transporter E4O03_11385 PF01702 Queuine tRNA-ribosyltransferase E4O03_11395 PF02565 Recombination protein O C terminal E4O03_11395 PF11967 Recombination protein O N terminal E4O03_11400 PF00271 Helicase conserved C-terminal domain E4O03_11400 PF00270 DEAD/DEAH box helicase E4O03_11400 PF00570 HRDC domain E4O03_11400 PF16124 RecQ zinc-binding E4O03_11400 PF09382 RQC domain E4O03_11405 PF02915 Rubrerythrin E4O03_11410 PF02743 Cache domain E4O03_11410 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_11410 PF00672 HAMP domain E4O03_11415 PF01435 Peptidase family M48 E4O03_11425 PF00175 Oxidoreductase NAD-binding domain E4O03_11425 PF00970 Oxidoreductase FAD-binding domain E4O03_11425 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4O03_11430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O03_11430 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_11435 PF08011 PD-(D/E)XK nuclease superfamily E4O03_11435 PF09820 Predicted AAA-ATPase E4O03_11460 PF00672 HAMP domain E4O03_11460 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_11460 PF02743 Cache domain E4O03_11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4O03_11465 PF03466 LysR substrate binding domain E4O03_11480 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4O03_11490 PF13416 Bacterial extracellular solute-binding protein E4O03_11495 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_11500 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_11505 PF00005 ABC transporter E4O03_11505 PF17912 MalK OB fold domain E4O03_11510 PF08240 Alcohol dehydrogenase GroES-like domain E4O03_11510 PF00107 Zinc-binding dehydrogenase E4O03_11515 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O03_11515 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4O03_11530 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_11535 PF00005 ABC transporter E4O03_11535 PF08402 TOBE domain E4O03_11550 PF00664 ABC transporter transmembrane region E4O03_11550 PF00005 ABC transporter E4O03_11555 PF00664 ABC transporter transmembrane region E4O03_11555 PF00005 ABC transporter E4O03_11555 PF03412 Peptidase C39 family E4O03_11565 PF03577 Peptidase family C69 E4O03_11570 PF02875 Mur ligase family, glutamate ligase domain E4O03_11570 PF08245 Mur ligase middle domain E4O03_11580 PF03023 Lipid II flippase MurJ E4O03_11585 PF03616 Sodium/glutamate symporter E4O03_11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_11595 PF00672 HAMP domain E4O03_11595 PF02743 Cache domain E4O03_11600 PF03477 ATP cone domain E4O03_11600 PF02867 Ribonucleotide reductase, barrel domain E4O03_11600 PF00317 Ribonucleotide reductase, all-alpha domain E4O03_11605 PF00274 Fructose-bisphosphate aldolase class-I E4O03_11610 PF01850 PIN domain E4O03_11615 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4O03_11620 PF00679 Elongation factor G C-terminus E4O03_11620 PF14492 Elongation Factor G, domain II E4O03_11620 PF03764 Elongation factor G, domain IV E4O03_11620 PF00009 Elongation factor Tu GTP binding domain E4O03_11620 PF03144 Elongation factor Tu domain 2 E4O03_11625 PF00005 ABC transporter E4O03_11625 PF00664 ABC transporter transmembrane region E4O03_11630 PF03412 Peptidase C39 family E4O03_11630 PF00005 ABC transporter E4O03_11630 PF00664 ABC transporter transmembrane region E4O03_11640 PF13808 DDE_Tnp_1-associated E4O03_11640 PF01609 Transposase DDE domain E4O03_11645 PF00486 Transcriptional regulatory protein, C terminal E4O03_11645 PF00072 Response regulator receiver domain E4O03_11655 PF00005 ABC transporter E4O03_11685 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E4O03_11695 PF02080 TrkA-C domain E4O03_11695 PF02254 TrkA-N domain E4O03_11700 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O03_11700 PF03989 DNA gyrase C-terminal domain, beta-propeller E4O03_11710 PF02971 Formiminotransferase domain E4O03_11710 PF07837 Formiminotransferase domain, N-terminal subdomain E4O03_11725 PF00883 Cytosol aminopeptidase family, catalytic domain E4O03_11725 PF02789 Cytosol aminopeptidase family, N-terminal domain E4O03_11735 PF00990 Diguanylate cyclase, GGDEF domain E4O03_11755 PF01926 50S ribosome-binding GTPase E4O03_11755 PF06071 Protein of unknown function (DUF933) E4O03_11760 PF01343 Peptidase family S49 E4O03_11775 PF00005 ABC transporter E4O03_11775 PF09383 NIL domain E4O03_11820 PF02511 Thymidylate synthase complementing protein E4O03_11825 PF02386 Cation transport protein E4O03_11830 PF02254 TrkA-N domain E4O03_11830 PF02080 TrkA-C domain E4O03_11840 PF07726 ATPase family associated with various cellular activities (AAA) E4O03_11840 PF17863 AAA lid domain E4O03_11845 PF01595 Cyclin M transmembrane N-terminal domain E4O03_11845 PF03471 Transporter associated domain E4O03_11845 PF00571 CBS domain E4O03_11850 PF01595 Cyclin M transmembrane N-terminal domain E4O03_11850 PF00571 CBS domain E4O03_11850 PF03471 Transporter associated domain E4O03_11860 PF07556 Protein of unknown function (DUF1538) E4O03_11875 PF00271 Helicase conserved C-terminal domain E4O03_11875 PF00570 HRDC domain E4O03_11875 PF16124 RecQ zinc-binding E4O03_11875 PF09382 RQC domain E4O03_11875 PF00270 DEAD/DEAH box helicase E4O03_11890 PF09827 CRISPR associated protein Cas2 E4O03_11900 PF00440 Bacterial regulatory proteins, tetR family E4O03_11900 PF17922 Tetracyclin repressor-like, C-terminal domain E4O03_11905 PF01554 MatE E4O03_11925 PF04542 Sigma-70 region 2 E4O03_11925 PF08281 Sigma-70, region 4 E4O03_11930 PF00268 Ribonucleotide reductase, small chain E4O03_11935 PF01594 AI-2E family transporter E4O03_11940 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4O03_11945 PF03601 Conserved hypothetical protein 698 E4O03_11950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_11950 PF00672 HAMP domain E4O03_11950 PF02743 Cache domain E4O03_11955 PF01212 Beta-eliminating lyase E4O03_11960 PF00209 Sodium:neurotransmitter symporter family E4O03_11970 PF00106 short chain dehydrogenase E4O03_11975 PF13411 MerR HTH family regulatory protein E4O03_12005 PF00664 ABC transporter transmembrane region E4O03_12005 PF00005 ABC transporter E4O03_12010 PF00664 ABC transporter transmembrane region E4O03_12010 PF00005 ABC transporter E4O03_12050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O03_12055 PF02504 Fatty acid synthesis protein E4O03_12065 PF00005 ABC transporter E4O03_12065 PF17912 MalK OB fold domain E4O03_12065 PF03459 TOBE domain E4O03_12070 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_12085 PF01966 HD domain E4O03_12085 PF12072 Domain of unknown function (DUF3552) E4O03_12085 PF00013 KH domain E4O03_12090 PF00005 ABC transporter E4O03_12100 PF13784 Fic/DOC family N-terminal E4O03_12100 PF02661 Fic/DOC family E4O03_12105 PF01661 Macro domain E4O03_12110 PF00712 DNA polymerase III beta subunit, N-terminal domain E4O03_12110 PF02767 DNA polymerase III beta subunit, central domain E4O03_12110 PF02768 DNA polymerase III beta subunit, C-terminal domain E4O03_12115 PF02463 RecF/RecN/SMC N terminal domain E4O03_12145 PF02661 Fic/DOC family E4O03_12165 PF00753 Metallo-beta-lactamase superfamily E4O03_12165 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4O03_12175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4O03_12175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4O03_12215 PF07238 PilZ domain E4O03_12230 PF00005 ABC transporter E4O03_12230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_12235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O03_12235 PF00005 ABC transporter E4O03_12240 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_12240 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O03_12245 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_12250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O03_12270 PF12557 Cob(I)alamin adenosyltransferase N terminal E4O03_12270 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E4O03_12275 PF03600 Citrate transporter E4O03_12280 PF02595 Glycerate kinase family E4O03_12285 PF02447 GntP family permease E4O03_12300 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4O03_12315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O03_12325 PF00005 ABC transporter E4O03_12325 PF00664 ABC transporter transmembrane region E4O03_12365 PF02661 Fic/DOC family E4O03_12370 PF00892 EamA-like transporter family E4O03_12375 PF01925 Sulfite exporter TauE/SafE E4O03_12380 PF00962 Adenosine/AMP deaminase E4O03_12390 PF00672 HAMP domain E4O03_12390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_12400 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_12425 PF01470 Pyroglutamyl peptidase E4O03_12450 PF00672 HAMP domain E4O03_12450 PF02743 Cache domain E4O03_12450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_12455 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4O03_12455 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4O03_12455 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4O03_12460 PF17854 FtsK alpha domain E4O03_12460 PF09397 Ftsk gamma domain E4O03_12460 PF01580 FtsK/SpoIIIE family E4O03_12465 PF02673 Bacitracin resistance protein BacA E4O03_12470 PF13476 AAA domain E4O03_12475 PF00149 Calcineurin-like phosphoesterase E4O03_12480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_12480 PF00672 HAMP domain E4O03_12480 PF17202 Single cache domain 3 E4O03_12485 PF07702 UTRA domain E4O03_12485 PF00392 Bacterial regulatory proteins, gntR family E4O03_12490 PF00005 ABC transporter E4O03_12510 PF00258 Flavodoxin E4O03_12525 PF01081 KDPG and KHG aldolase E4O03_12545 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_12545 PF00672 HAMP domain E4O03_12550 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O03_12555 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_12555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O03_12575 PF00072 Response regulator receiver domain E4O03_12575 PF00196 Bacterial regulatory proteins, luxR family E4O03_12580 PF07730 Histidine kinase E4O03_12585 PF07687 Peptidase dimerisation domain E4O03_12585 PF01546 Peptidase family M20/M25/M40 E4O03_12600 PF00005 ABC transporter E4O03_12600 PF08402 TOBE domain E4O03_12605 PF00528 Binding-protein-dependent transport system inner membrane component E4O03_12610 PF01547 Bacterial extracellular solute-binding protein E4O03_12675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O03_12675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O03_12685 PF04324 BFD-like [2Fe-2S] binding domain E4O03_12685 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_12690 PF01266 FAD dependent oxidoreductase E4O03_12695 PF07729 FCD domain E4O03_12695 PF00392 Bacterial regulatory proteins, gntR family E4O03_12705 PF00375 Sodium:dicarboxylate symporter family E4O03_12710 PF00440 Bacterial regulatory proteins, tetR family E4O03_12710 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O03_12715 PF00005 ABC transporter E4O03_12715 PF08021 Siderophore-interacting FAD-binding domain E4O03_12715 PF04954 Siderophore-interacting protein E4O03_12715 PF00664 ABC transporter transmembrane region E4O03_12720 PF00005 ABC transporter E4O03_12720 PF00664 ABC transporter transmembrane region E4O03_12725 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4O03_12725 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4O03_12725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O03_12725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O03_12730 PF00990 Diguanylate cyclase, GGDEF domain E4O03_12730 PF08448 PAS fold E4O03_12730 PF00563 EAL domain E4O03_12745 PF00990 Diguanylate cyclase, GGDEF domain E4O03_12745 PF00072 Response regulator receiver domain E4O03_12760 PF01207 Dihydrouridine synthase (Dus) E4O03_12790 PF03824 High-affinity nickel-transport protein E4O03_12805 PF04468 PSP1 C-terminal conserved region E4O03_12810 PF03885 Protein of unknown function (DUF327) E4O03_12820 PF01551 Peptidase family M23 E4O03_12820 PF04225 Opacity-associated protein A LysM-like domain E4O03_12825 PF01409 tRNA synthetases class II core domain (F) E4O03_12830 PF00128 Alpha amylase, catalytic domain E4O03_12840 PF12683 Protein of unknown function (DUF3798) E4O03_12845 PF00005 ABC transporter E4O03_12865 PF08011 PD-(D/E)XK nuclease superfamily E4O03_12865 PF09820 Predicted AAA-ATPase E4O03_12870 PF01048 Phosphorylase superfamily E4O03_12875 PF01761 3-dehydroquinate synthase E4O03_12880 PF00266 Aminotransferase class-V E4O03_12890 PF00128 Alpha amylase, catalytic domain E4O03_12890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4O03_12895 PF07676 WD40-like Beta Propeller Repeat E4O03_12895 PF00326 Prolyl oligopeptidase family E4O03_12900 PF01555 DNA methylase E4O03_12905 PF02661 Fic/DOC family E4O03_12905 PF12728 Helix-turn-helix domain E4O03_12910 PF00664 ABC transporter transmembrane region E4O03_12910 PF00005 ABC transporter E4O03_12910 PF03412 Peptidase C39 family E4O03_12915 PF03412 Peptidase C39 family E4O03_12915 PF00005 ABC transporter E4O03_12915 PF00664 ABC transporter transmembrane region E4O03_12920 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O03_12920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O03_12925 PF13173 AAA domain E4O03_12925 PF13635 Domain of unknown function (DUF4143) E4O03_12935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4O03_12935 PF01565 FAD binding domain E4O03_12940 PF09190 DALR domain E4O03_12940 PF01406 tRNA synthetases class I (C) catalytic domain E4O03_12955 PF01841 Transglutaminase-like superfamily E4O03_12960 PF02386 Cation transport protein E4O03_12965 PF02254 TrkA-N domain E4O03_12965 PF02080 TrkA-C domain E4O03_12970 PF12705 PD-(D/E)XK nuclease superfamily E4O03_12975 PF13361 UvrD-like helicase C-terminal domain E4O03_12975 PF12705 PD-(D/E)XK nuclease superfamily E4O03_12975 PF00580 UvrD/REP helicase N-terminal domain E4O03_12980 PF00391 PEP-utilising enzyme, mobile domain E4O03_12980 PF02896 PEP-utilising enzyme, TIM barrel domain E4O03_12980 PF05524 PEP-utilising enzyme, N-terminal E4O03_12985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4O03_12985 PF01926 50S ribosome-binding GTPase E4O03_13000 PF00672 HAMP domain E4O03_13000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O03_13000 PF02743 Cache domain E4O03_13005 PF16325 Peptidase family U32 C-terminal domain E4O03_13005 PF01136 Peptidase family U32 E4O03_13020 PF00140 Sigma-70 factor, region 1.2 E4O03_13020 PF03979 Sigma-70 factor, region 1.1 E4O03_13020 PF04545 Sigma-70, region 4 E4O03_13020 PF04539 Sigma-70 region 3 E4O03_13020 PF04542 Sigma-70 region 2 E4O03_13030 PF01546 Peptidase family M20/M25/M40 E4O03_13030 PF07687 Peptidase dimerisation domain E4O03_13035 PF00027 Cyclic nucleotide-binding domain E4O03_13035 PF13545 Crp-like helix-turn-helix domain E4O03_13050 PF00365 Phosphofructokinase E4O03_13075 PF13173 AAA domain E4O03_13075 PF13635 Domain of unknown function (DUF4143) E4O03_13130 PF01192 RNA polymerase Rpb6 E4O03_13135 PF00771 FHIPEP family E4O03_13140 PF01312 FlhB HrpN YscU SpaS Family E4O03_13145 PF01311 Bacterial export proteins, family 1 E4O03_13150 PF01313 Bacterial export proteins, family 3 E4O03_13190 PF01979 Amidohydrolase family E4O03_13205 PF09820 Predicted AAA-ATPase E4O03_13205 PF08011 PD-(D/E)XK nuclease superfamily E4O03_13210 PF12419 SNF2 Helicase protein E4O03_13210 PF00271 Helicase conserved C-terminal domain E4O03_13210 PF00176 SNF2 family N-terminal domain E4O03_13215 PF00403 Heavy-metal-associated domain E4O03_13225 PF00293 NUDIX domain E4O03_13230 PF00210 Ferritin-like domain E4O03_13235 PF00578 AhpC/TSA family E4O03_13235 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4O03_13240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4O03_13240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4O03_13245 PF13505 Outer membrane protein beta-barrel domain E4O03_13255 PF00004 ATPase family associated with various cellular activities (AAA) E4O03_13255 PF16193 AAA C-terminal domain E4O03_13255 PF12002 MgsA AAA+ ATPase C terminal E4O03_13260 PF05343 M42 glutamyl aminopeptidase E4O03_13265 PF01476 LysM domain E4O03_13265 PF00756 Putative esterase E4O03_13270 PF01268 Formate--tetrahydrofolate ligase E4O03_13275 PF03129 Anticodon binding domain E4O03_13275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O03_13295 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O03_13295 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4O03_13335 PF01230 HIT domain E4O03_13355 PF03527 RHS protein E4O03_13355 PF05593 RHS Repeat E4O03_13395 PF00109 Beta-ketoacyl synthase, N-terminal domain E4O03_13395 PF02801 Beta-ketoacyl synthase, C-terminal domain E4O03_13405 PF13193 AMP-binding enzyme C-terminal domain E4O03_13405 PF00501 AMP-binding enzyme E4O03_13410 PF03099 Biotin/lipoate A/B protein ligase family E4O03_13410 PF08279 HTH domain E4O03_13410 PF02237 Biotin protein ligase C terminal domain E4O03_13415 PF01515 Phosphate acetyl/butaryl transferase E4O03_13420 PF13176 Tetratricopeptide repeat E4O03_13420 PF13174 Tetratricopeptide repeat E4O03_13425 PF03960 ArsC family E4O03_13430 PF12848 ABC transporter E4O03_13430 PF00005 ABC transporter E4O03_13440 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O03_13440 PF00270 DEAD/DEAH box helicase E4O03_13440 PF17191 RecG wedge domain E4O03_13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O03_13455 PF00204 DNA gyrase B E4O03_13455 PF00986 DNA gyrase B subunit, carboxyl terminus E4O03_13455 PF01751 Toprim domain