locus-tag class description E4O07_00005 PF00308 Bacterial dnaA protein E4O07_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4O07_00005 PF11638 DnaA N-terminal domain E4O07_00020 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4O07_00020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4O07_00020 PF14579 Helix-hairpin-helix motif E4O07_00020 PF02811 PHP domain E4O07_00030 PF17239 Family of unknown function (DUF5312) E4O07_00045 PF00005 ABC transporter E4O07_00045 PF00664 ABC transporter transmembrane region E4O07_00050 PF00664 ABC transporter transmembrane region E4O07_00050 PF00005 ABC transporter E4O07_00070 PF00561 alpha/beta hydrolase fold E4O07_00095 PF01032 FecCD transport family E4O07_00100 PF00005 ABC transporter E4O07_00105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4O07_00105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4O07_00115 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O07_00115 PF01799 [2Fe-2S] binding domain E4O07_00125 PF02625 XdhC and CoxI family E4O07_00125 PF13478 XdhC Rossmann domain E4O07_00130 PF02028 BCCT, betaine/carnitine/choline family transporter E4O07_00135 PF00221 Aromatic amino acid lyase E4O07_00170 PF03963 Flagellar hook capping protein - N-terminal region E4O07_00175 PF07559 Flagellar basal body protein FlaE E4O07_00175 PF00460 Flagella basal body rod protein E4O07_00175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O07_00185 PF01618 MotA/TolQ/ExbB proton channel family E4O07_00190 PF00691 OmpA family E4O07_00190 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4O07_00195 PF03748 Flagellar basal body-associated protein FliL E4O07_00200 PF02154 Flagellar motor switch protein FliM E4O07_00200 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O07_00205 PF04509 CheC-like family E4O07_00205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4O07_00215 PF00813 FliP family E4O07_00220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O07_00225 PF02423 Ornithine cyclodeaminase/mu-crystallin family E4O07_00230 PF01476 LysM domain E4O07_00230 PF08525 Opacity-associated protein A N-terminal motif E4O07_00230 PF01551 Peptidase family M23 E4O07_00260 PF05922 Peptidase inhibitor I9 E4O07_00260 PF00082 Subtilase family E4O07_00265 PF16360 GTP-binding GTPase Middle Region E4O07_00265 PF13167 GTP-binding GTPase N-terminal E4O07_00265 PF01926 50S ribosome-binding GTPase E4O07_00290 PF01207 Dihydrouridine synthase (Dus) E4O07_00295 PF01026 TatD related DNase E4O07_00305 PF13173 AAA domain E4O07_00305 PF13635 Domain of unknown function (DUF4143) E4O07_00310 PF00990 Diguanylate cyclase, GGDEF domain E4O07_00315 PF00072 Response regulator receiver domain E4O07_00315 PF00990 Diguanylate cyclase, GGDEF domain E4O07_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4O07_00320 PF14572 Phosphoribosyl synthetase-associated domain E4O07_00325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O07_00325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O07_00360 PF04452 RNA methyltransferase E4O07_00370 PF00571 CBS domain E4O07_00370 PF01769 Divalent cation transporter E4O07_00370 PF03448 MgtE intracellular N domain E4O07_00380 PF13419 Haloacid dehalogenase-like hydrolase E4O07_00385 PF00588 SpoU rRNA Methylase family E4O07_00385 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O07_00420 PF03390 2-hydroxycarboxylate transporter family E4O07_00450 PF00005 ABC transporter E4O07_00455 PF01458 Uncharacterized protein family (UPF0051) E4O07_00465 PF00004 ATPase family associated with various cellular activities (AAA) E4O07_00465 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O07_00465 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4O07_00475 PF01934 Protein of unknown function DUF86 E4O07_00525 PF01206 Sulfurtransferase TusA E4O07_00535 PF00266 Aminotransferase class-V E4O07_00540 PF02355 Protein export membrane protein E4O07_00545 PF02355 Protein export membrane protein E4O07_00550 PF02699 Preprotein translocase subunit E4O07_00555 PF00436 Single-strand binding protein family E4O07_00560 PF00106 short chain dehydrogenase E4O07_00565 PF01259 SAICAR synthetase E4O07_00570 PF00731 AIR carboxylase E4O07_00580 PF01636 Phosphotransferase enzyme family E4O07_00590 PF00664 ABC transporter transmembrane region E4O07_00590 PF00005 ABC transporter E4O07_00595 PF08543 Phosphomethylpyrimidine kinase E4O07_00600 PF00005 ABC transporter E4O07_00625 PF01145 SPFH domain / Band 7 family E4O07_00630 PF01145 SPFH domain / Band 7 family E4O07_00650 PF01625 Peptide methionine sulfoxide reductase E4O07_00650 PF01641 SelR domain E4O07_00670 PF02719 Polysaccharide biosynthesis protein E4O07_00725 PF03412 Peptidase C39 family E4O07_00725 PF00005 ABC transporter E4O07_00725 PF00664 ABC transporter transmembrane region E4O07_00730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4O07_00780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O07_00790 PF01799 [2Fe-2S] binding domain E4O07_00790 PF00111 2Fe-2S iron-sulfur cluster binding domain E4O07_00795 PF03450 CO dehydrogenase flavoprotein C-terminal domain E4O07_00795 PF00941 FAD binding domain in molybdopterin dehydrogenase E4O07_00825 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_00830 PF00085 Thioredoxin E4O07_00840 PF02384 N-6 DNA Methylase E4O07_00845 PF01420 Type I restriction modification DNA specificity domain E4O07_00865 PF00589 Phage integrase family E4O07_00865 PF02899 Phage integrase, N-terminal SAM-like domain E4O07_00885 PF18766 SWI2/SNF2 ATPase E4O07_00885 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4O07_00885 PF11867 Domain of unknown function (DUF3387) E4O07_00890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4O07_00895 PF03553 Na+/H+ antiporter family E4O07_00900 PF00005 ABC transporter E4O07_00905 PF01032 FecCD transport family E4O07_00925 PF05922 Peptidase inhibitor I9 E4O07_00925 PF00082 Subtilase family E4O07_00930 PF00009 Elongation factor Tu GTP binding domain E4O07_00930 PF03144 Elongation factor Tu domain 2 E4O07_00930 PF03143 Elongation factor Tu C-terminal domain E4O07_00935 PF00338 Ribosomal protein S10p/S20e E4O07_00940 PF00297 Ribosomal protein L3 E4O07_00945 PF00573 Ribosomal protein L4/L1 family E4O07_00950 PF00276 Ribosomal protein L23 E4O07_00955 PF00181 Ribosomal Proteins L2, RNA binding domain E4O07_00955 PF03947 Ribosomal Proteins L2, C-terminal domain E4O07_00960 PF00203 Ribosomal protein S19 E4O07_00965 PF00237 Ribosomal protein L22p/L17e E4O07_00970 PF00189 Ribosomal protein S3, C-terminal domain E4O07_00970 PF07650 KH domain E4O07_00975 PF00252 Ribosomal protein L16p/L10e E4O07_00980 PF00831 Ribosomal L29 protein E4O07_00985 PF00366 Ribosomal protein S17 E4O07_00990 PF00238 Ribosomal protein L14p/L23e E4O07_00995 PF00467 KOW motif E4O07_00995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4O07_01000 PF00673 ribosomal L5P family C-terminus E4O07_01000 PF00281 Ribosomal protein L5 E4O07_01005 PF00253 Ribosomal protein S14p/S29e E4O07_01010 PF00410 Ribosomal protein S8 E4O07_01015 PF00347 Ribosomal protein L6 E4O07_01020 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4O07_01025 PF00333 Ribosomal protein S5, N-terminal domain E4O07_01025 PF03719 Ribosomal protein S5, C-terminal domain E4O07_01030 PF00327 Ribosomal protein L30p/L7e E4O07_01035 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4O07_01040 PF00344 SecY translocase E4O07_01045 PF00444 Ribosomal protein L36 E4O07_01050 PF00416 Ribosomal protein S13/S18 E4O07_01055 PF00411 Ribosomal protein S11 E4O07_01060 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4O07_01060 PF01000 RNA polymerase Rpb3/RpoA insert domain E4O07_01060 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4O07_01065 PF01196 Ribosomal protein L17 E4O07_01085 PF00708 Acylphosphatase E4O07_01095 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O07_01110 PF02082 Transcriptional regulator E4O07_01115 PF13460 NAD(P)H-binding E4O07_01135 PF13091 PLD-like domain E4O07_01135 PF13396 Phospholipase_D-nuclease N-terminal E4O07_01140 PF01139 tRNA-splicing ligase RtcB E4O07_01160 PF03852 DNA mismatch endonuclease Vsr E4O07_01165 PF00145 C-5 cytosine-specific DNA methylase E4O07_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_01175 PF00072 Response regulator receiver domain E4O07_01255 PF01609 Transposase DDE domain E4O07_01255 PF05598 Transposase domain (DUF772) E4O07_01260 PF00005 ABC transporter E4O07_01275 PF01022 Bacterial regulatory protein, arsR family E4O07_01280 PF11855 Protein of unknown function (DUF3375) E4O07_01300 PF12729 Four helix bundle sensory module for signal transduction E4O07_01300 PF00672 HAMP domain E4O07_01300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_01320 PF00664 ABC transporter transmembrane region E4O07_01320 PF00005 ABC transporter E4O07_01320 PF03412 Peptidase C39 family E4O07_01325 PF00664 ABC transporter transmembrane region E4O07_01325 PF00005 ABC transporter E4O07_01335 PF02678 Pirin E4O07_01335 PF05726 Pirin C-terminal cupin domain E4O07_01345 PF01613 Flavin reductase like domain E4O07_01350 PF01638 HxlR-like helix-turn-helix E4O07_01355 PF03606 C4-dicarboxylate anaerobic carrier E4O07_01360 PF07687 Peptidase dimerisation domain E4O07_01360 PF01546 Peptidase family M20/M25/M40 E4O07_01370 PF00664 ABC transporter transmembrane region E4O07_01370 PF00005 ABC transporter E4O07_01375 PF00005 ABC transporter E4O07_01375 PF00664 ABC transporter transmembrane region E4O07_01380 PF00664 ABC transporter transmembrane region E4O07_01380 PF04954 Siderophore-interacting protein E4O07_01380 PF00005 ABC transporter E4O07_01380 PF08021 Siderophore-interacting FAD-binding domain E4O07_01390 PF00005 ABC transporter E4O07_01390 PF00664 ABC transporter transmembrane region E4O07_01395 PF00005 ABC transporter E4O07_01410 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O07_01410 PF00440 Bacterial regulatory proteins, tetR family E4O07_01415 PF07977 FabA-like domain E4O07_01425 PF02875 Mur ligase family, glutamate ligase domain E4O07_01425 PF01225 Mur ligase family, catalytic domain E4O07_01425 PF08245 Mur ligase middle domain E4O07_01430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O07_01430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O07_01435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O07_01435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O07_01440 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O07_01445 PF00596 Class II Aldolase and Adducin N-terminal domain E4O07_01455 PF01008 Initiation factor 2 subunit family E4O07_01460 PF01636 Phosphotransferase enzyme family E4O07_01465 PF01134 Glucose inhibited division protein A E4O07_01465 PF13932 GidA associated domain E4O07_01470 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O07_01480 PF02508 Rnf-Nqr subunit, membrane protein E4O07_01485 PF02508 Rnf-Nqr subunit, membrane protein E4O07_01490 PF04205 FMN-binding domain E4O07_01495 PF03116 NQR2, RnfD, RnfE family E4O07_01500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O07_01500 PF13237 4Fe-4S dicluster domain E4O07_01500 PF13375 RnfC Barrel sandwich hybrid domain E4O07_01500 PF10531 SLBB domain E4O07_01505 PF00581 Rhodanese-like domain E4O07_01505 PF17773 UPF0176 acylphosphatase like domain E4O07_01515 PF13519 von Willebrand factor type A domain E4O07_01530 PF00391 PEP-utilising enzyme, mobile domain E4O07_01530 PF02896 PEP-utilising enzyme, TIM barrel domain E4O07_01540 PF16314 Domain of unknown function (DUF4954) E4O07_01555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_01555 PF00672 HAMP domain E4O07_01555 PF02743 Cache domain E4O07_01560 PF00672 HAMP domain E4O07_01560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_01560 PF02743 Cache domain E4O07_01575 PF00572 Ribosomal protein L13 E4O07_01580 PF00380 Ribosomal protein S9/S16 E4O07_01590 PF00072 Response regulator receiver domain E4O07_01590 PF00196 Bacterial regulatory proteins, luxR family E4O07_01595 PF00596 Class II Aldolase and Adducin N-terminal domain E4O07_01615 PF01479 S4 domain E4O07_01615 PF00849 RNA pseudouridylate synthase E4O07_01620 PF00579 tRNA synthetases class I (W and Y) E4O07_01635 PF02308 MgtC family E4O07_01640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O07_01640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O07_01640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O07_01640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O07_01660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O07_01660 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_01665 PF01609 Transposase DDE domain E4O07_01665 PF13808 DDE_Tnp_1-associated E4O07_01675 PF00149 Calcineurin-like phosphoesterase E4O07_01675 PF02872 5'-nucleotidase, C-terminal domain E4O07_01680 PF00154 recA bacterial DNA recombination protein E4O07_01685 PF02616 Segregation and condensation protein ScpA E4O07_01690 PF04079 Segregation and condensation complex subunit ScpB E4O07_01695 PF00849 RNA pseudouridylate synthase E4O07_01695 PF01479 S4 domain E4O07_01710 PF00005 ABC transporter E4O07_01710 PF09383 NIL domain E4O07_01715 PF00005 ABC transporter E4O07_01715 PF02687 FtsX-like permease family E4O07_01715 PF12704 MacB-like periplasmic core domain E4O07_01720 PF02277 Phosphoribosyltransferase E4O07_01725 PF00886 Ribosomal protein S16 E4O07_01735 PF01782 RimM N-terminal domain E4O07_01740 PF01746 tRNA (Guanine-1)-methyltransferase E4O07_01745 PF01245 Ribosomal protein L19 E4O07_01760 PF13361 UvrD-like helicase C-terminal domain E4O07_01760 PF00580 UvrD/REP helicase N-terminal domain E4O07_01765 PF08011 PD-(D/E)XK nuclease superfamily E4O07_01765 PF09820 Predicted AAA-ATPase E4O07_01770 PF07687 Peptidase dimerisation domain E4O07_01770 PF01546 Peptidase family M20/M25/M40 E4O07_01785 PF00005 ABC transporter E4O07_01790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O07_01790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O07_01795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O07_01795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O07_01800 PF01554 MatE E4O07_01805 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_01810 PF00871 Acetokinase family E4O07_01830 PF00166 Chaperonin 10 Kd subunit E4O07_01835 PF03979 Sigma-70 factor, region 1.1 E4O07_01835 PF04545 Sigma-70, region 4 E4O07_01835 PF00140 Sigma-70 factor, region 1.2 E4O07_01835 PF04542 Sigma-70 region 2 E4O07_01835 PF04539 Sigma-70 region 3 E4O07_01840 PF01170 Putative RNA methylase family UPF0020 E4O07_01840 PF02926 THUMP domain E4O07_01845 PF01963 TraB family E4O07_01855 PF00877 NlpC/P60 family E4O07_01860 PF00501 AMP-binding enzyme E4O07_01860 PF13193 AMP-binding enzyme C-terminal domain E4O07_01870 PF03781 Sulfatase-modifying factor enzyme 1 E4O07_01880 PF00009 Elongation factor Tu GTP binding domain E4O07_01880 PF03144 Elongation factor Tu domain 2 E4O07_01880 PF00679 Elongation factor G C-terminus E4O07_01880 PF14492 Elongation Factor G, domain II E4O07_01880 PF03764 Elongation factor G, domain IV E4O07_01890 PF03952 Enolase, N-terminal domain E4O07_01890 PF00113 Enolase, C-terminal TIM barrel domain E4O07_01905 PF02446 4-alpha-glucanotransferase E4O07_01915 PF07478 D-ala D-ala ligase C-terminus E4O07_01915 PF01820 D-ala D-ala ligase N-terminus E4O07_01925 PF02654 Cobalamin-5-phosphate synthase E4O07_01935 PF07730 Histidine kinase E4O07_01950 PF00005 ABC transporter E4O07_01965 PF05175 Methyltransferase small domain E4O07_01970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O07_01975 PF08534 Redoxin E4O07_01980 PF12801 4Fe-4S binding domain E4O07_01980 PF04205 FMN-binding domain E4O07_01990 PF04073 Aminoacyl-tRNA editing domain E4O07_02000 PF02653 Branched-chain amino acid transport system / permease component E4O07_02005 PF11862 Domain of unknown function (DUF3382) E4O07_02005 PF02653 Branched-chain amino acid transport system / permease component E4O07_02010 PF00005 ABC transporter E4O07_02010 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O07_02015 PF00005 ABC transporter E4O07_02030 PF02733 Dak1 domain E4O07_02035 PF02733 Dak1 domain E4O07_02035 PF02734 DAK2 domain E4O07_02045 PF01032 FecCD transport family E4O07_02055 PF02599 Global regulator protein family E4O07_02060 PF02623 FliW protein E4O07_02065 PF00669 Bacterial flagellin N-terminal helical region E4O07_02065 PF07196 Flagellin hook IN motif E4O07_02065 PF00700 Bacterial flagellin C-terminal helical region E4O07_02070 PF07196 Flagellin hook IN motif E4O07_02070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O07_02090 PF02545 Maf-like protein E4O07_02095 PF00318 Ribosomal protein S2 E4O07_02100 PF00889 Elongation factor TS E4O07_02105 PF01765 Ribosome recycling factor E4O07_02110 PF01255 Putative undecaprenyl diphosphate synthase E4O07_02120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4O07_02120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4O07_02120 PF13288 DXP reductoisomerase C-terminal domain E4O07_02125 PF17820 PDZ domain E4O07_02125 PF02163 Peptidase family M50 E4O07_02130 PF04205 FMN-binding domain E4O07_02135 PF13603 Leucyl-tRNA synthetase, Domain 2 E4O07_02135 PF08264 Anticodon-binding domain of tRNA E4O07_02135 PF00133 tRNA synthetases class I (I, L, M and V) E4O07_02135 PF09334 tRNA synthetases class I (M) E4O07_02140 PF02073 Thermophilic metalloprotease (M29) E4O07_02145 PF00375 Sodium:dicarboxylate symporter family E4O07_02150 PF00664 ABC transporter transmembrane region E4O07_02150 PF00005 ABC transporter E4O07_02155 PF00664 ABC transporter transmembrane region E4O07_02155 PF00005 ABC transporter E4O07_02160 PF00580 UvrD/REP helicase N-terminal domain E4O07_02160 PF13361 UvrD-like helicase C-terminal domain E4O07_02185 PF03806 AbgT putative transporter family E4O07_02190 PF00004 ATPase family associated with various cellular activities (AAA) E4O07_02190 PF07724 AAA domain (Cdc48 subfamily) E4O07_02190 PF17871 AAA lid domain E4O07_02190 PF02861 Clp amino terminal domain, pathogenicity island component E4O07_02190 PF10431 C-terminal, D2-small domain, of ClpB protein E4O07_02195 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_02195 PF00672 HAMP domain E4O07_02215 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O07_02225 PF00196 Bacterial regulatory proteins, luxR family E4O07_02225 PF00072 Response regulator receiver domain E4O07_02230 PF00924 Mechanosensitive ion channel E4O07_02245 PF04542 Sigma-70 region 2 E4O07_02245 PF08281 Sigma-70, region 4 E4O07_02255 PF01464 Transglycosylase SLT domain E4O07_02255 PF10145 Phage-related minor tail protein E4O07_02255 PF01551 Peptidase family M23 E4O07_02260 PF03006 Haemolysin-III related E4O07_02265 PF09820 Predicted AAA-ATPase E4O07_02265 PF08011 PD-(D/E)XK nuclease superfamily E4O07_02285 PF01168 Alanine racemase, N-terminal domain E4O07_02290 PF01590 GAF domain E4O07_02290 PF00158 Sigma-54 interaction domain E4O07_02310 PF02403 Seryl-tRNA synthetase N-terminal domain E4O07_02310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O07_02325 PF02021 Uncharacterised protein family UPF0102 E4O07_02330 PF00072 Response regulator receiver domain E4O07_02335 PF01312 FlhB HrpN YscU SpaS Family E4O07_02340 PF00595 PDZ domain E4O07_02345 PF00795 Carbon-nitrogen hydrolase E4O07_02350 PF08544 GHMP kinases C terminal E4O07_02350 PF10509 Galactokinase galactose-binding signature E4O07_02365 PF00924 Mechanosensitive ion channel E4O07_02375 PF13419 Haloacid dehalogenase-like hydrolase E4O07_02385 PF02542 YgbB family E4O07_02390 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4O07_02390 PF02542 YgbB family E4O07_02400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O07_02400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O07_02400 PF03129 Anticodon binding domain E4O07_02400 PF02824 TGS domain E4O07_02405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O07_02405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4O07_02410 PF03819 MazG nucleotide pyrophosphohydrolase domain E4O07_02415 PF08011 PD-(D/E)XK nuclease superfamily E4O07_02415 PF09820 Predicted AAA-ATPase E4O07_02425 PF13276 HTH-like domain E4O07_02425 PF00665 Integrase core domain E4O07_02425 PF13333 Integrase core domain E4O07_02445 PF00860 Permease family E4O07_02455 PF00953 Glycosyl transferase family 4 E4O07_02460 PF00899 ThiF family E4O07_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_02465 PF01751 Toprim domain E4O07_02465 PF00204 DNA gyrase B E4O07_02465 PF00986 DNA gyrase B subunit, carboxyl terminus E4O07_02475 PF03932 CutC family E4O07_02485 PF06368 Methylaspartate mutase E chain (MutE) E4O07_02490 PF07476 Methylaspartate ammonia-lyase C-terminus E4O07_02490 PF05034 Methylaspartate ammonia-lyase N-terminus E4O07_02500 PF01032 FecCD transport family E4O07_02505 PF00005 ABC transporter E4O07_02520 PF01546 Peptidase family M20/M25/M40 E4O07_02520 PF07687 Peptidase dimerisation domain E4O07_02530 PF01297 Zinc-uptake complex component A periplasmic E4O07_02550 PF03129 Anticodon binding domain E4O07_02550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O07_02550 PF04073 Aminoacyl-tRNA editing domain E4O07_02560 PF10502 Signal peptidase, peptidase S26 E4O07_02570 PF13407 Periplasmic binding protein domain E4O07_02570 PF18610 Periplasmic binding protein domain E4O07_02575 PF00005 ABC transporter E4O07_02580 PF02653 Branched-chain amino acid transport system / permease component E4O07_02585 PF13847 Methyltransferase domain E4O07_02600 PF10509 Galactokinase galactose-binding signature E4O07_02600 PF08544 GHMP kinases C terminal E4O07_02600 PF00288 GHMP kinases N terminal domain E4O07_02610 PF01784 NIF3 (NGG1p interacting factor 3) E4O07_02625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4O07_02625 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_02635 PF03553 Na+/H+ antiporter family E4O07_02650 PF01053 Cys/Met metabolism PLP-dependent enzyme E4O07_02655 PF01177 Asp/Glu/Hydantoin racemase E4O07_02660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O07_02660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O07_02660 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O07_02660 PF10371 Domain of unknown function E4O07_02660 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O07_02670 PF00849 RNA pseudouridylate synthase E4O07_02670 PF01479 S4 domain E4O07_02675 PF00155 Aminotransferase class I and II E4O07_02690 PF02885 Glycosyl transferase family, helical bundle domain E4O07_02690 PF00591 Glycosyl transferase family, a/b domain E4O07_02690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4O07_02695 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4O07_02695 PF17768 RecJ OB domain E4O07_02695 PF01368 DHH family E4O07_02695 PF02272 DHHA1 domain E4O07_02700 PF01551 Peptidase family M23 E4O07_02700 PF08525 Opacity-associated protein A N-terminal motif E4O07_02700 PF01476 LysM domain E4O07_02710 PF02195 ParB-like nuclease domain E4O07_02710 PF17762 HTH domain found in ParB protein E4O07_02715 PF00501 AMP-binding enzyme E4O07_02730 PF14353 CpXC protein E4O07_02740 PF01569 PAP2 superfamily E4O07_02745 PF10396 GTP-binding protein TrmE N-terminus E4O07_02745 PF12631 MnmE helical domain E4O07_02745 PF01926 50S ribosome-binding GTPase E4O07_02750 PF00654 Voltage gated chloride channel E4O07_02780 PF08241 Methyltransferase domain E4O07_02790 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O07_02790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4O07_02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_02800 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O07_02810 PF04298 Putative neutral zinc metallopeptidase E4O07_02815 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4O07_02815 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4O07_02815 PF01189 16S rRNA methyltransferase RsmB/F E4O07_02820 PF13302 Acetyltransferase (GNAT) domain E4O07_02825 PF09820 Predicted AAA-ATPase E4O07_02825 PF08011 PD-(D/E)XK nuclease superfamily E4O07_02835 PF00005 ABC transporter E4O07_02875 PF00707 Translation initiation factor IF-3, C-terminal domain E4O07_02875 PF05198 Translation initiation factor IF-3, N-terminal domain E4O07_02880 PF01632 Ribosomal protein L35 E4O07_02885 PF00453 Ribosomal protein L20 E4O07_02895 PF05164 Cell division protein ZapA E4O07_02900 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4O07_02910 PF01476 LysM domain E4O07_02910 PF01464 Transglycosylase SLT domain E4O07_02930 PF03781 Sulfatase-modifying factor enzyme 1 E4O07_02935 PF03313 Serine dehydratase alpha chain E4O07_02940 PF06832 Penicillin-Binding Protein C-terminus Family E4O07_02940 PF00912 Transglycosylase E4O07_02940 PF00905 Penicillin binding protein transpeptidase domain E4O07_02945 PF01609 Transposase DDE domain E4O07_02945 PF13808 DDE_Tnp_1-associated E4O07_02950 PF00326 Prolyl oligopeptidase family E4O07_02950 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O07_02980 PF00005 ABC transporter E4O07_02985 PF01891 Cobalt uptake substrate-specific transmembrane region E4O07_03000 PF01850 PIN domain E4O07_03010 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4O07_03015 PF07724 AAA domain (Cdc48 subfamily) E4O07_03015 PF00004 ATPase family associated with various cellular activities (AAA) E4O07_03015 PF17871 AAA lid domain E4O07_03015 PF10431 C-terminal, D2-small domain, of ClpB protein E4O07_03015 PF02861 Clp amino terminal domain, pathogenicity island component E4O07_03020 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4O07_03030 PF02677 Epoxyqueuosine reductase QueH E4O07_03035 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4O07_03045 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O07_03050 PF03687 Uncharacterised protein family (UPF0164) E4O07_03060 PF00672 HAMP domain E4O07_03060 PF07228 Stage II sporulation protein E (SpoIIE) E4O07_03065 PF00005 ABC transporter E4O07_03065 PF13732 Domain of unknown function (DUF4162) E4O07_03085 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4O07_03105 PF00270 DEAD/DEAH box helicase E4O07_03105 PF00271 Helicase conserved C-terminal domain E4O07_03115 PF01979 Amidohydrolase family E4O07_03155 PF07075 Protein of unknown function (DUF1343) E4O07_03160 PF00144 Beta-lactamase E4O07_03170 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O07_03175 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4O07_03180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4O07_03180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4O07_03185 PF00448 SRP54-type protein, GTPase domain E4O07_03185 PF02881 SRP54-type protein, helical bundle domain E4O07_03185 PF02978 Signal peptide binding domain E4O07_03190 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4O07_03195 PF01176 Translation initiation factor 1A / IF-1 E4O07_03200 PF00226 DnaJ domain E4O07_03200 PF01556 DnaJ C terminal domain E4O07_03200 PF00684 DnaJ central domain E4O07_03205 PF00696 Amino acid kinase family E4O07_03210 PF00588 SpoU rRNA Methylase family E4O07_03225 PF00575 S1 RNA binding domain E4O07_03230 PF02954 Bacterial regulatory protein, Fis family E4O07_03230 PF00072 Response regulator receiver domain E4O07_03230 PF00158 Sigma-54 interaction domain E4O07_03250 PF00563 EAL domain E4O07_03250 PF00990 Diguanylate cyclase, GGDEF domain E4O07_03250 PF03707 Bacterial signalling protein N terminal repeat E4O07_03255 PF04055 Radical SAM superfamily E4O07_03280 PF01042 Endoribonuclease L-PSP E4O07_03285 PF01119 DNA mismatch repair protein, C-terminal domain E4O07_03285 PF08676 MutL C terminal dimerisation domain E4O07_03290 PF02609 Exonuclease VII small subunit E4O07_03295 PF00005 ABC transporter E4O07_03300 PF00005 ABC transporter E4O07_03310 PF04023 FeoA domain E4O07_03315 PF07670 Nucleoside recognition E4O07_03315 PF02421 Ferrous iron transport protein B E4O07_03315 PF04023 FeoA domain E4O07_03315 PF07664 Ferrous iron transport protein B C terminus E4O07_03315 PF17910 FeoB cytosolic helical domain E4O07_03360 PF00266 Aminotransferase class-V E4O07_03380 PF03781 Sulfatase-modifying factor enzyme 1 E4O07_03400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O07_03415 PF03462 PCRF domain E4O07_03415 PF00472 RF-1 domain E4O07_03430 PF00448 SRP54-type protein, GTPase domain E4O07_03430 PF02881 SRP54-type protein, helical bundle domain E4O07_03440 PF02687 FtsX-like permease family E4O07_03440 PF12704 MacB-like periplasmic core domain E4O07_03445 PF00005 ABC transporter E4O07_03455 PF02151 UvrB/uvrC motif E4O07_03460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4O07_03465 PF02861 Clp amino terminal domain, pathogenicity island component E4O07_03465 PF10431 C-terminal, D2-small domain, of ClpB protein E4O07_03465 PF17871 AAA lid domain E4O07_03465 PF00004 ATPase family associated with various cellular activities (AAA) E4O07_03465 PF07724 AAA domain (Cdc48 subfamily) E4O07_03470 PF00483 Nucleotidyl transferase E4O07_03480 PF03330 Lytic transglycolase E4O07_03480 PF03330 Lytic transglycolase E4O07_03490 PF01026 TatD related DNase E4O07_03495 PF00691 OmpA family E4O07_03580 PF05598 Transposase domain (DUF772) E4O07_03580 PF01609 Transposase DDE domain E4O07_03680 PF07687 Peptidase dimerisation domain E4O07_03680 PF01546 Peptidase family M20/M25/M40 E4O07_03690 PF03606 C4-dicarboxylate anaerobic carrier E4O07_03715 PF01593 Flavin containing amine oxidoreductase E4O07_03730 PF01432 Peptidase family M3 E4O07_03730 PF08439 Oligopeptidase F E4O07_03735 PF00929 Exonuclease E4O07_03740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4O07_03740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4O07_03740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4O07_03740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4O07_03745 PF01078 Magnesium chelatase, subunit ChlI E4O07_03745 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4O07_03750 PF10415 Fumarase C C-terminus E4O07_03750 PF00206 Lyase E4O07_03765 PF06733 DEAD_2 E4O07_03765 PF13307 Helicase C-terminal domain E4O07_03785 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_03785 PF00672 HAMP domain E4O07_03790 PF04773 FecR protein E4O07_03835 PF03033 Glycosyltransferase family 28 N-terminal domain E4O07_03835 PF04101 Glycosyltransferase family 28 C-terminal domain E4O07_03840 PF02674 Colicin V production protein E4O07_03845 PF09115 DNA polymerase III, delta subunit, C terminal E4O07_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_03850 PF00512 His Kinase A (phospho-acceptor) domain E4O07_03850 PF00989 PAS fold E4O07_03855 PF00158 Sigma-54 interaction domain E4O07_03855 PF00072 Response regulator receiver domain E4O07_03855 PF02954 Bacterial regulatory protein, Fis family E4O07_03860 PF01728 FtsJ-like methyltransferase E4O07_03870 PF13180 PDZ domain E4O07_03870 PF17820 PDZ domain E4O07_03875 PF02690 Na+/Pi-cotransporter E4O07_03880 PF00009 Elongation factor Tu GTP binding domain E4O07_03880 PF03144 Elongation factor Tu domain 2 E4O07_03880 PF09105 Elongation factor SelB, winged helix E4O07_03880 PF09106 Elongation factor SelB, winged helix E4O07_03880 PF09107 Elongation factor SelB, winged helix E4O07_03895 PF00753 Metallo-beta-lactamase superfamily E4O07_03895 PF12706 Beta-lactamase superfamily domain E4O07_03900 PF02608 ABC transporter substrate-binding protein PnrA-like E4O07_03905 PF00005 ABC transporter E4O07_03910 PF02653 Branched-chain amino acid transport system / permease component E4O07_03915 PF02653 Branched-chain amino acid transport system / permease component E4O07_03945 PF00163 Ribosomal protein S4/S9 N-terminal domain E4O07_03945 PF01479 S4 domain E4O07_03975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4O07_03995 PF03484 tRNA synthetase B5 domain E4O07_03995 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4O07_04015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O07_04030 PF13186 Iron-sulfur cluster-binding domain E4O07_04045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O07_04045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O07_04050 PF00465 Iron-containing alcohol dehydrogenase E4O07_04055 PF05491 RuvB C-terminal winged helix domain E4O07_04055 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4O07_04055 PF17864 RuvB AAA lid domain E4O07_04060 PF10672 S-adenosylmethionine-dependent methyltransferase E4O07_04065 PF02629 CoA binding domain E4O07_04065 PF06971 Putative DNA-binding protein N-terminus E4O07_04080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4O07_04080 PF02779 Transketolase, pyrimidine binding domain E4O07_04080 PF02780 Transketolase, C-terminal domain E4O07_04085 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4O07_04095 PF01648 4'-phosphopantetheinyl transferase superfamily E4O07_04105 PF00005 ABC transporter E4O07_04110 PF00392 Bacterial regulatory proteins, gntR family E4O07_04115 PF07517 SecA DEAD-like domain E4O07_04115 PF02810 SEC-C motif E4O07_04115 PF01043 SecA preprotein cross-linking domain E4O07_04115 PF07516 SecA Wing and Scaffold domain E4O07_04120 PF00551 Formyl transferase E4O07_04125 PF02142 MGS-like domain E4O07_04125 PF01808 AICARFT/IMPCHase bienzyme E4O07_04130 PF01926 50S ribosome-binding GTPase E4O07_04130 PF07650 KH domain E4O07_04135 PF04060 Putative Fe-S cluster E4O07_04140 PF09820 Predicted AAA-ATPase E4O07_04140 PF08011 PD-(D/E)XK nuclease superfamily E4O07_04145 PF00679 Elongation factor G C-terminus E4O07_04145 PF14492 Elongation Factor G, domain II E4O07_04145 PF00009 Elongation factor Tu GTP binding domain E4O07_04145 PF03144 Elongation factor Tu domain 2 E4O07_04145 PF06421 GTP-binding protein LepA C-terminus E4O07_04150 PF05525 Branched-chain amino acid transport protein E4O07_04165 PF04055 Radical SAM superfamily E4O07_04165 PF00919 Uncharacterized protein family UPF0004 E4O07_04180 PF00232 Glycosyl hydrolase family 1 E4O07_04200 PF00005 ABC transporter E4O07_04200 PF12848 ABC transporter E4O07_04210 PF13180 PDZ domain E4O07_04210 PF03572 Peptidase family S41 E4O07_04215 PF04452 RNA methyltransferase E4O07_04240 PF08367 Peptidase M16C associated E4O07_04240 PF00675 Insulinase (Peptidase family M16) E4O07_04240 PF05193 Peptidase M16 inactive domain E4O07_04245 PF02075 Crossover junction endodeoxyribonuclease RuvC E4O07_04250 PF01330 RuvA N terminal domain E4O07_04290 PF06463 Molybdenum Cofactor Synthesis C E4O07_04290 PF04055 Radical SAM superfamily E4O07_04300 PF00005 ABC transporter E4O07_04305 PF00005 ABC transporter E4O07_04305 PF02687 FtsX-like permease family E4O07_04305 PF12704 MacB-like periplasmic core domain E4O07_04325 PF13495 Phage integrase, N-terminal SAM-like domain E4O07_04325 PF00589 Phage integrase family E4O07_04415 PF12146 Serine aminopeptidase, S33 E4O07_04625 PF01609 Transposase DDE domain E4O07_04625 PF13808 DDE_Tnp_1-associated E4O07_04650 PF01361 Tautomerase enzyme E4O07_04705 PF01209 ubiE/COQ5 methyltransferase family E4O07_04710 PF00912 Transglycosylase E4O07_04720 PF00300 Histidine phosphatase superfamily (branch 1) E4O07_04730 PF01966 HD domain E4O07_04755 PF06397 Desulfoferrodoxin, N-terminal domain E4O07_04755 PF01880 Desulfoferrodoxin E4O07_04760 PF16363 GDP-mannose 4,6 dehydratase E4O07_04770 PF04294 VanW like protein E4O07_04775 PF00829 Ribosomal prokaryotic L21 protein E4O07_04785 PF01016 Ribosomal L27 protein E4O07_04790 PF01926 50S ribosome-binding GTPase E4O07_04790 PF01018 GTP1/OBG E4O07_04795 PF01467 Cytidylyltransferase-like E4O07_04810 PF02417 Chromate transporter E4O07_04815 PF02417 Chromate transporter E4O07_04835 PF00501 AMP-binding enzyme E4O07_04845 PF00905 Penicillin binding protein transpeptidase domain E4O07_04845 PF00912 Transglycosylase E4O07_04845 PF17092 Penicillin-binding protein OB-like domain E4O07_04855 PF04225 Opacity-associated protein A LysM-like domain E4O07_04855 PF01551 Peptidase family M23 E4O07_04865 PF00037 4Fe-4S binding domain E4O07_04875 PF03372 Endonuclease/Exonuclease/phosphatase family E4O07_04880 PF00557 Metallopeptidase family M24 E4O07_04885 PF00684 DnaJ central domain E4O07_04885 PF00226 DnaJ domain E4O07_04885 PF01556 DnaJ C terminal domain E4O07_04890 PF16355 Domain of unknown function (DUF4982) E4O07_04890 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 E4O07_04890 PF00703 Glycosyl hydrolases family 2 E4O07_04890 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4O07_04890 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4O07_04915 PF01743 Poly A polymerase head domain E4O07_04915 PF12626 Polymerase A arginine-rich C-terminus E4O07_04915 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O07_04930 PF01171 PP-loop family E4O07_04930 PF00958 GMP synthase C terminal domain E4O07_04930 PF00117 Glutamine amidotransferase class-I E4O07_04940 PF00162 Phosphoglycerate kinase E4O07_04945 PF01520 N-acetylmuramoyl-L-alanine amidase E4O07_04955 PF04620 Flagellar filament outer layer protein Flaa E4O07_04965 PF01649 Ribosomal protein S20 E4O07_04970 PF00216 Bacterial DNA-binding protein E4O07_04975 PF00795 Carbon-nitrogen hydrolase E4O07_04985 PF02464 Competence-damaged protein E4O07_04985 PF18146 Damage-inducible protein CinA KH domain E4O07_04985 PF00994 Probable molybdopterin binding domain E4O07_05010 PF00300 Histidine phosphatase superfamily (branch 1) E4O07_05015 PF07364 Metallopeptidase family M81 E4O07_05015 PF07171 MlrC C-terminus E4O07_05030 PF00005 ABC transporter E4O07_05045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O07_05050 PF00360 Phytochrome region E4O07_05050 PF01590 GAF domain E4O07_05050 PF00990 Diguanylate cyclase, GGDEF domain E4O07_05050 PF00563 EAL domain E4O07_05055 PF00156 Phosphoribosyl transferase domain E4O07_05060 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O07_05060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O07_05060 PF16886 ATPsynthase alpha/beta subunit N-term extension E4O07_05065 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O07_05065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O07_05070 PF01813 ATP synthase subunit D E4O07_05085 PF01250 Ribosomal protein S6 E4O07_05090 PF00436 Single-strand binding protein family E4O07_05095 PF01084 Ribosomal protein S18 E4O07_05100 PF03948 Ribosomal protein L9, C-terminal domain E4O07_05100 PF01281 Ribosomal protein L9, N-terminal domain E4O07_05110 PF07724 AAA domain (Cdc48 subfamily) E4O07_05110 PF10431 C-terminal, D2-small domain, of ClpB protein E4O07_05110 PF06689 ClpX C4-type zinc finger E4O07_05115 PF00574 Clp protease E4O07_05120 PF05697 Bacterial trigger factor protein (TF) E4O07_05120 PF05698 Bacterial trigger factor protein (TF) C-terminus E4O07_05120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4O07_05140 PF00155 Aminotransferase class I and II E4O07_05150 PF01008 Initiation factor 2 subunit family E4O07_05170 PF00772 DnaB-like helicase N terminal domain E4O07_05170 PF03796 DnaB-like helicase C terminal domain E4O07_05190 PF13333 Integrase core domain E4O07_05190 PF00665 Integrase core domain E4O07_05190 PF13276 HTH-like domain E4O07_05205 PF01411 tRNA synthetases class II (A) E4O07_05205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O07_05210 PF13145 PPIC-type PPIASE domain E4O07_05215 PF01029 NusB family E4O07_05230 PF00271 Helicase conserved C-terminal domain E4O07_05230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4O07_05230 PF04408 Helicase associated domain (HA2) E4O07_05230 PF00270 DEAD/DEAH box helicase E4O07_05235 PF08011 PD-(D/E)XK nuclease superfamily E4O07_05235 PF09820 Predicted AAA-ATPase E4O07_05240 PF00664 ABC transporter transmembrane region E4O07_05240 PF00005 ABC transporter E4O07_05245 PF00664 ABC transporter transmembrane region E4O07_05245 PF00005 ABC transporter E4O07_05250 PF02632 BioY family E4O07_05255 PF00005 ABC transporter E4O07_05260 PF02361 Cobalt transport protein E4O07_05275 PF01327 Polypeptide deformylase E4O07_05280 PF02911 Formyl transferase, C-terminal domain E4O07_05280 PF00551 Formyl transferase E4O07_05285 PF03793 PASTA domain E4O07_05295 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4O07_05300 PF01488 Shikimate / quinate 5-dehydrogenase E4O07_05300 PF08501 Shikimate dehydrogenase substrate binding domain E4O07_05300 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4O07_05310 PF01121 Dephospho-CoA kinase E4O07_05315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4O07_05315 PF01612 3'-5' exonuclease E4O07_05315 PF00476 DNA polymerase family A E4O07_05315 PF01367 5'-3' exonuclease, C-terminal SAM fold E4O07_05320 PF06857 Malonate decarboxylase delta subunit (MdcD) E4O07_05325 PF03328 HpcH/HpaI aldolase/citrate lyase family E4O07_05330 PF04223 Citrate lyase, alpha subunit (CitF) E4O07_05345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O07_05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_05350 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4O07_05350 PF01571 Aminomethyltransferase folate-binding domain E4O07_05355 PF01597 Glycine cleavage H-protein E4O07_05360 PF02347 Glycine cleavage system P-protein E4O07_05365 PF02347 Glycine cleavage system P-protein E4O07_05390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O07_05390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4O07_05440 PF00271 Helicase conserved C-terminal domain E4O07_05440 PF04851 Type III restriction enzyme, res subunit E4O07_05445 PF00881 Nitroreductase family E4O07_05465 PF04471 Restriction endonuclease E4O07_05465 PF14338 Mrr N-terminal domain E4O07_05475 PF01888 CbiD E4O07_05480 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_05480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O07_05485 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O07_05485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4O07_05485 PF00037 4Fe-4S binding domain E4O07_05485 PF02256 Iron hydrogenase small subunit E4O07_05490 PF12848 ABC transporter E4O07_05490 PF00005 ABC transporter E4O07_05495 PF01513 ATP-NAD kinase E4O07_05505 PF01584 CheW-like domain E4O07_05510 PF00579 tRNA synthetases class I (W and Y) E4O07_05515 PF00152 tRNA synthetases class II (D, K and N) E4O07_05515 PF02938 GAD domain E4O07_05515 PF01336 OB-fold nucleic acid binding domain E4O07_05530 PF08323 Starch synthase catalytic domain E4O07_05530 PF00534 Glycosyl transferases group 1 E4O07_05565 PF00919 Uncharacterized protein family UPF0004 E4O07_05565 PF04055 Radical SAM superfamily E4O07_05565 PF01938 TRAM domain E4O07_05570 PF04055 Radical SAM superfamily E4O07_05575 PF10437 Bacterial lipoate protein ligase C-terminus E4O07_05575 PF03099 Biotin/lipoate A/B protein ligase family E4O07_05580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_05580 PF00005 ABC transporter E4O07_05585 PF00005 ABC transporter E4O07_05585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_05590 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_05590 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O07_05595 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_05600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O07_05605 PF00365 Phosphofructokinase E4O07_05610 PF02132 RecR protein E4O07_05610 PF13662 Toprim domain E4O07_05615 PF02575 YbaB/EbfC DNA-binding family E4O07_05620 PF01351 Ribonuclease HII E4O07_05640 PF02618 YceG-like family E4O07_05655 PF03692 Putative zinc- or iron-chelating domain E4O07_05675 PF00533 BRCA1 C Terminus (BRCT) domain E4O07_05675 PF01653 NAD-dependent DNA ligase adenylation domain E4O07_05675 PF03120 NAD-dependent DNA ligase OB-fold domain E4O07_05685 PF00348 Polyprenyl synthetase E4O07_05695 PF13277 YmdB-like protein E4O07_05715 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4O07_05720 PF08218 Citrate lyase ligase C-terminal domain E4O07_05725 PF05683 Fumarase C-terminus E4O07_05725 PF05681 Fumarate hydratase (Fumerase) E4O07_05730 PF05681 Fumarate hydratase (Fumerase) E4O07_05750 PF00005 ABC transporter E4O07_05755 PF02687 FtsX-like permease family E4O07_05755 PF12704 MacB-like periplasmic core domain E4O07_05770 PF10634 Fe2+ transport protein E4O07_05775 PF03239 Iron permease FTR1 family E4O07_05780 PF00005 ABC transporter E4O07_05790 PF03315 Serine dehydratase beta chain E4O07_05790 PF01842 ACT domain E4O07_05795 PF03313 Serine dehydratase alpha chain E4O07_05805 PF01197 Ribosomal protein L31 E4O07_05810 PF07497 Rho termination factor, RNA-binding domain E4O07_05810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O07_05810 PF07498 Rho termination factor, N-terminal domain E4O07_05825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4O07_05825 PF00391 PEP-utilising enzyme, mobile domain E4O07_05825 PF02896 PEP-utilising enzyme, TIM barrel domain E4O07_05835 PF10397 Adenylosuccinate lyase C-terminus E4O07_05835 PF00206 Lyase E4O07_05840 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_05840 PF00072 Response regulator receiver domain E4O07_05850 PF03781 Sulfatase-modifying factor enzyme 1 E4O07_05880 PF13525 Outer membrane lipoprotein E4O07_05890 PF02463 RecF/RecN/SMC N terminal domain E4O07_05890 PF06470 SMC proteins Flexible Hinge Domain E4O07_05900 PF00072 Response regulator receiver domain E4O07_05910 PF01584 CheW-like domain E4O07_05915 PF02895 Signal transducing histidine kinase, homodimeric domain E4O07_05915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_05915 PF01627 Hpt domain E4O07_05915 PF07194 P2 response regulator binding domain E4O07_05915 PF01584 CheW-like domain E4O07_05930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4O07_05930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4O07_05935 PF01709 Transcriptional regulator E4O07_05945 PF01321 Creatinase/Prolidase N-terminal domain E4O07_05945 PF00557 Metallopeptidase family M24 E4O07_05970 PF00669 Bacterial flagellin N-terminal helical region E4O07_05970 PF00700 Bacterial flagellin C-terminal helical region E4O07_05975 PF00700 Bacterial flagellin C-terminal helical region E4O07_05975 PF00669 Bacterial flagellin N-terminal helical region E4O07_05985 PF07195 Flagellar hook-associated protein 2 C-terminus E4O07_05985 PF02465 Flagellar hook-associated protein 2 N-terminus E4O07_06000 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4O07_06010 PF00672 HAMP domain E4O07_06010 PF01966 HD domain E4O07_06015 PF06969 HemN C-terminal domain E4O07_06015 PF04055 Radical SAM superfamily E4O07_06020 PF10502 Signal peptidase, peptidase S26 E4O07_06025 PF01668 SmpB protein E4O07_06035 PF01300 Telomere recombination E4O07_06055 PF01973 Protein of unknown function DUF115 E4O07_06080 PF00005 ABC transporter E4O07_06090 PF00072 Response regulator receiver domain E4O07_06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_06090 PF00512 His Kinase A (phospho-acceptor) domain E4O07_06090 PF12833 Helix-turn-helix domain E4O07_06090 PF07494 Two component regulator propeller E4O07_06090 PF07495 Y_Y_Y domain E4O07_06095 PF00486 Transcriptional regulatory protein, C terminal E4O07_06095 PF00072 Response regulator receiver domain E4O07_06105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4O07_06115 PF00488 MutS domain V E4O07_06115 PF01713 Smr domain E4O07_06120 PF16745 RsgA N-terminal domain E4O07_06120 PF03193 RsgA GTPase E4O07_06125 PF01177 Asp/Glu/Hydantoin racemase E4O07_06130 PF00005 ABC transporter E4O07_06130 PF00664 ABC transporter transmembrane region E4O07_06135 PF00664 ABC transporter transmembrane region E4O07_06135 PF00005 ABC transporter E4O07_06155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4O07_06155 PF00753 Metallo-beta-lactamase superfamily E4O07_06155 PF10996 Beta-Casp domain E4O07_06160 PF00588 SpoU rRNA Methylase family E4O07_06160 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4O07_06165 PF13393 Histidyl-tRNA synthetase E4O07_06170 PF16363 GDP-mannose 4,6 dehydratase E4O07_06175 PF00483 Nucleotidyl transferase E4O07_06180 PF01370 NAD dependent epimerase/dehydratase family E4O07_06185 PF13439 Glycosyltransferase Family 4 E4O07_06185 PF00534 Glycosyl transferases group 1 E4O07_06195 PF02096 60Kd inner membrane protein E4O07_06195 PF14849 YidC periplasmic domain E4O07_06200 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E4O07_06210 PF02096 60Kd inner membrane protein E4O07_06220 PF00535 Glycosyl transferase family 2 E4O07_06225 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E4O07_06230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4O07_06250 PF00535 Glycosyl transferase family 2 E4O07_06255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4O07_06255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4O07_06255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4O07_06260 PF00535 Glycosyl transferase family 2 E4O07_06260 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 E4O07_06285 PF00535 Glycosyl transferase family 2 E4O07_06300 PF02719 Polysaccharide biosynthesis protein E4O07_06300 PF08485 Polysaccharide biosynthesis protein C-terminal E4O07_06310 PF14524 Wzt C-terminal domain E4O07_06310 PF00005 ABC transporter E4O07_06320 PF13173 AAA domain E4O07_06320 PF13635 Domain of unknown function (DUF4143) E4O07_06325 PF00266 Aminotransferase class-V E4O07_06330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4O07_06330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O07_06350 PF00999 Sodium/hydrogen exchanger family E4O07_06375 PF01966 HD domain E4O07_06390 PF08239 Bacterial SH3 domain E4O07_06395 PF00005 ABC transporter E4O07_06395 PF16326 ABC transporter C-terminal domain E4O07_06395 PF12848 ABC transporter E4O07_06405 PF02540 NAD synthase E4O07_06410 PF01790 Prolipoprotein diacylglyceryl transferase E4O07_06420 PF10609 NUBPL iron-transfer P-loop NTPase E4O07_06450 PF03116 NQR2, RnfD, RnfE family E4O07_06455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4O07_06455 PF13237 4Fe-4S dicluster domain E4O07_06455 PF10531 SLBB domain E4O07_06455 PF13375 RnfC Barrel sandwich hybrid domain E4O07_06480 PF01609 Transposase DDE domain E4O07_06480 PF05598 Transposase domain (DUF772) E4O07_06490 PF00403 Heavy-metal-associated domain E4O07_06495 PF01022 Bacterial regulatory protein, arsR family E4O07_06500 PF01991 ATP synthase (E/31 kDa) subunit E4O07_06515 PF01467 Cytidylyltransferase-like E4O07_06540 PF00773 RNB domain E4O07_06545 PF01256 Carbohydrate kinase E4O07_06545 PF03853 YjeF-related protein N-terminus E4O07_06550 PF17757 UvrB interaction domain E4O07_06550 PF12344 Ultra-violet resistance protein B E4O07_06550 PF04851 Type III restriction enzyme, res subunit E4O07_06550 PF00271 Helicase conserved C-terminal domain E4O07_06550 PF02151 UvrB/uvrC motif E4O07_06555 PF00005 ABC transporter E4O07_06615 PF00005 ABC transporter E4O07_06625 PF00664 ABC transporter transmembrane region E4O07_06625 PF00005 ABC transporter E4O07_06630 PF04055 Radical SAM superfamily E4O07_06630 PF13186 Iron-sulfur cluster-binding domain E4O07_06665 PF13280 WYL domain E4O07_06665 PF08279 HTH domain E4O07_06670 PF08264 Anticodon-binding domain of tRNA E4O07_06670 PF00133 tRNA synthetases class I (I, L, M and V) E4O07_06670 PF10458 Valyl tRNA synthetase tRNA binding arm E4O07_06675 PF00860 Permease family E4O07_06685 PF01263 Aldose 1-epimerase E4O07_06700 PF01098 Cell cycle protein E4O07_06705 PF03717 Penicillin-binding Protein dimerisation domain E4O07_06705 PF00905 Penicillin binding protein transpeptidase domain E4O07_06740 PF03979 Sigma-70 factor, region 1.1 E4O07_06740 PF00140 Sigma-70 factor, region 1.2 E4O07_06740 PF04542 Sigma-70 region 2 E4O07_06740 PF04545 Sigma-70, region 4 E4O07_06740 PF04539 Sigma-70 region 3 E4O07_06745 PF08275 DNA primase catalytic core, N-terminal domain E4O07_06745 PF01807 CHC2 zinc finger E4O07_06755 PF00180 Isocitrate/isopropylmalate dehydrogenase E4O07_06765 PF13180 PDZ domain E4O07_06765 PF17820 PDZ domain E4O07_06775 PF01171 PP-loop family E4O07_06780 PF01386 Ribosomal L25p family E4O07_06780 PF14693 Ribosomal protein TL5, C-terminal domain E4O07_06790 PF04026 SpoVG E4O07_06795 PF08544 GHMP kinases C terminal E4O07_06795 PF00288 GHMP kinases N terminal domain E4O07_06805 PF03062 MBOAT, membrane-bound O-acyltransferase family E4O07_06815 PF01145 SPFH domain / Band 7 family E4O07_06820 PF01145 SPFH domain / Band 7 family E4O07_06830 PF03477 ATP cone domain E4O07_06855 PF09186 Domain of unknown function (DUF1949) E4O07_06855 PF01205 Uncharacterized protein family UPF0029 E4O07_06885 PF00905 Penicillin binding protein transpeptidase domain E4O07_06885 PF03717 Penicillin-binding Protein dimerisation domain E4O07_06895 PF05872 Bacterial protein of unknown function (DUF853) E4O07_06900 PF00005 ABC transporter E4O07_06900 PF03412 Peptidase C39 family E4O07_06900 PF00664 ABC transporter transmembrane region E4O07_06910 PF01523 Putative modulator of DNA gyrase E4O07_06915 PF02779 Transketolase, pyrimidine binding domain E4O07_06915 PF00456 Transketolase, thiamine diphosphate binding domain E4O07_06935 PF02463 RecF/RecN/SMC N terminal domain E4O07_06955 PF00877 NlpC/P60 family E4O07_06955 PF01476 LysM domain E4O07_06965 PF07475 HPr Serine kinase C-terminal domain E4O07_06965 PF02603 HPr Serine kinase N terminus E4O07_06970 PF00381 PTS HPr component phosphorylation site E4O07_06975 PF01523 Putative modulator of DNA gyrase E4O07_06980 PF01523 Putative modulator of DNA gyrase E4O07_07000 PF00005 ABC transporter E4O07_07005 PF17757 UvrB interaction domain E4O07_07005 PF03461 TRCF domain E4O07_07005 PF00271 Helicase conserved C-terminal domain E4O07_07005 PF00270 DEAD/DEAH box helicase E4O07_07005 PF02559 CarD-like/TRCF domain E4O07_07020 PF02743 Cache domain E4O07_07020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_07020 PF00672 HAMP domain E4O07_07130 PF00586 AIR synthase related protein, N-terminal domain E4O07_07130 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4O07_07130 PF02769 AIR synthase related protein, C-terminal domain E4O07_07135 PF04260 Protein of unknown function (DUF436) E4O07_07140 PF12838 4Fe-4S dicluster domain E4O07_07140 PF02256 Iron hydrogenase small subunit E4O07_07140 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4O07_07150 PF17726 Dam-replacing HTH domain E4O07_07150 PF06044 Dam-replacing family E4O07_07155 PF02843 Phosphoribosylglycinamide synthetase, C domain E4O07_07155 PF02844 Phosphoribosylglycinamide synthetase, N domain E4O07_07155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4O07_07160 PF00586 AIR synthase related protein, N-terminal domain E4O07_07160 PF02769 AIR synthase related protein, C-terminal domain E4O07_07165 PF04551 GcpE protein E4O07_07180 PF02028 BCCT, betaine/carnitine/choline family transporter E4O07_07185 PF12804 MobA-like NTP transferase domain E4O07_07190 PF01235 Sodium:alanine symporter family E4O07_07205 PF01966 HD domain E4O07_07205 PF00072 Response regulator receiver domain E4O07_07210 PF00488 MutS domain V E4O07_07210 PF01713 Smr domain E4O07_07230 PF00092 von Willebrand factor type A domain E4O07_07240 PF01882 Protein of unknown function DUF58 E4O07_07255 PF03471 Transporter associated domain E4O07_07255 PF00571 CBS domain E4O07_07260 PF02130 Uncharacterized protein family UPF0054 E4O07_07265 PF07698 7TM receptor with intracellular HD hydrolase E4O07_07265 PF07697 7TM-HD extracellular E4O07_07265 PF01966 HD domain E4O07_07270 PF02562 PhoH-like protein E4O07_07285 PF00121 Triosephosphate isomerase E4O07_07310 PF00753 Metallo-beta-lactamase superfamily E4O07_07325 PF10282 Lactonase, 7-bladed beta-propeller E4O07_07330 PF01297 Zinc-uptake complex component A periplasmic E4O07_07335 PF00005 ABC transporter E4O07_07340 PF00950 ABC 3 transport family E4O07_07345 PF00950 ABC 3 transport family E4O07_07355 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O07_07370 PF18269 T3SS EscN ATPase C-terminal domain E4O07_07370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4O07_07370 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4O07_07375 PF02108 Flagellar assembly protein FliH E4O07_07380 PF14841 FliG middle domain E4O07_07380 PF14842 FliG N-terminal domain E4O07_07380 PF01706 FliG C-terminal domain E4O07_07385 PF08345 Flagellar M-ring protein C-terminal E4O07_07385 PF01514 Secretory protein of YscJ/FliF family E4O07_07390 PF02049 Flagellar hook-basal body complex protein FliE E4O07_07395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O07_07395 PF00460 Flagella basal body rod protein E4O07_07400 PF00460 Flagella basal body rod protein E4O07_07405 PF00004 ATPase family associated with various cellular activities (AAA) E4O07_07405 PF07724 AAA domain (Cdc48 subfamily) E4O07_07410 PF00227 Proteasome subunit E4O07_07415 PF02899 Phage integrase, N-terminal SAM-like domain E4O07_07415 PF00589 Phage integrase family E4O07_07420 PF01751 Toprim domain E4O07_07420 PF01131 DNA topoisomerase E4O07_07420 PF01396 Topoisomerase DNA binding C4 zinc finger E4O07_07425 PF02481 DNA recombination-mediator protein A E4O07_07425 PF17782 DprA winged helix domain E4O07_07435 PF02899 Phage integrase, N-terminal SAM-like domain E4O07_07435 PF00589 Phage integrase family E4O07_07440 PF00091 Tubulin/FtsZ family, GTPase domain E4O07_07440 PF12327 FtsZ family, C-terminal domain E4O07_07445 PF02491 SHS2 domain inserted in FTSA E4O07_07455 PF01098 Cell cycle protein E4O07_07460 PF01225 Mur ligase family, catalytic domain E4O07_07460 PF02875 Mur ligase family, glutamate ligase domain E4O07_07460 PF08245 Mur ligase middle domain E4O07_07470 PF01795 MraW methylase family E4O07_07475 PF02381 MraZ protein, putative antitoxin-like E4O07_07480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4O07_07480 PF00326 Prolyl oligopeptidase family E4O07_07515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4O07_07515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4O07_07515 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4O07_07525 PF02233 NAD(P) transhydrogenase beta subunit E4O07_07540 PF00118 TCP-1/cpn60 chaperonin family E4O07_07555 PF00589 Phage integrase family E4O07_07555 PF02899 Phage integrase, N-terminal SAM-like domain E4O07_07610 PF17762 HTH domain found in ParB protein E4O07_07610 PF02195 ParB-like nuclease domain E4O07_07645 PF01555 DNA methylase E4O07_07750 PF01264 Chorismate synthase E4O07_07755 PF02390 Putative methyltransferase E4O07_07795 PF01740 STAS domain E4O07_07815 PF01212 Beta-eliminating lyase E4O07_07835 PF16325 Peptidase family U32 C-terminal domain E4O07_07835 PF01136 Peptidase family U32 E4O07_07840 PF07859 alpha/beta hydrolase fold E4O07_07845 PF00664 ABC transporter transmembrane region E4O07_07845 PF00005 ABC transporter E4O07_07850 PF01725 Ham1 family E4O07_07860 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4O07_07865 PF01416 tRNA pseudouridine synthase E4O07_07875 PF02146 Sir2 family E4O07_07880 PF08668 HDOD domain E4O07_07895 PF00152 tRNA synthetases class II (D, K and N) E4O07_07900 PF00005 ABC transporter E4O07_07900 PF02687 FtsX-like permease family E4O07_07900 PF12704 MacB-like periplasmic core domain E4O07_07905 PF00005 ABC transporter E4O07_07920 PF09820 Predicted AAA-ATPase E4O07_07920 PF08011 PD-(D/E)XK nuclease superfamily E4O07_07925 PF13333 Integrase core domain E4O07_07925 PF13276 HTH-like domain E4O07_07925 PF00665 Integrase core domain E4O07_07935 PF05191 Adenylate kinase, active site lid E4O07_07950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4O07_07950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4O07_07955 PF02576 RimP N-terminal domain E4O07_07955 PF17384 RimP C-terminal SH3 domain E4O07_07960 PF13184 NusA-like KH domain E4O07_07960 PF08529 NusA N-terminal domain E4O07_07960 PF00575 S1 RNA binding domain E4O07_07965 PF00009 Elongation factor Tu GTP binding domain E4O07_07965 PF11987 Translation-initiation factor 2 E4O07_07965 PF04760 Translation initiation factor IF-2, N-terminal region E4O07_07970 PF02033 Ribosome-binding factor A E4O07_07975 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4O07_08005 PF02401 LytB protein E4O07_08010 PF00842 Alanine racemase, C-terminal domain E4O07_08010 PF01168 Alanine racemase, N-terminal domain E4O07_08020 PF16258 Domain of unknown function (DUF4912) E4O07_08035 PF03129 Anticodon binding domain E4O07_08035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O07_08035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4O07_08055 PF03755 YicC-like family, N-terminal region E4O07_08055 PF08340 Domain of unknown function (DUF1732) E4O07_08060 PF08245 Mur ligase middle domain E4O07_08060 PF01225 Mur ligase family, catalytic domain E4O07_08060 PF02875 Mur ligase family, glutamate ligase domain E4O07_08065 PF02875 Mur ligase family, glutamate ligase domain E4O07_08065 PF08245 Mur ligase middle domain E4O07_08070 PF00849 RNA pseudouridylate synthase E4O07_08070 PF01479 S4 domain E4O07_08075 PF00849 RNA pseudouridylate synthase E4O07_08085 PF00398 Ribosomal RNA adenine dimethylase E4O07_08090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4O07_08095 PF00753 Metallo-beta-lactamase superfamily E4O07_08095 PF01613 Flavin reductase like domain E4O07_08100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_08100 PF00005 ABC transporter E4O07_08105 PF00005 ABC transporter E4O07_08105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_08110 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O07_08110 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_08115 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_08125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O07_08130 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_08135 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O07_08135 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_08140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_08140 PF00005 ABC transporter E4O07_08145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_08145 PF00005 ABC transporter E4O07_08155 PF01588 Putative tRNA binding domain E4O07_08155 PF09334 tRNA synthetases class I (M) E4O07_08165 PF00005 ABC transporter E4O07_08170 PF00005 ABC transporter E4O07_08180 PF03781 Sulfatase-modifying factor enzyme 1 E4O07_08190 PF09820 Predicted AAA-ATPase E4O07_08190 PF08011 PD-(D/E)XK nuclease superfamily E4O07_08195 PF01554 MatE E4O07_08200 PF00664 ABC transporter transmembrane region E4O07_08200 PF00005 ABC transporter E4O07_08205 PF00005 ABC transporter E4O07_08205 PF00664 ABC transporter transmembrane region E4O07_08210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_08210 PF00672 HAMP domain E4O07_08210 PF02743 Cache domain E4O07_08215 PF03553 Na+/H+ antiporter family E4O07_08220 PF00155 Aminotransferase class I and II E4O07_08225 PF00158 Sigma-54 interaction domain E4O07_08225 PF13426 PAS domain E4O07_08225 PF02954 Bacterial regulatory protein, Fis family E4O07_08235 PF00301 Rubredoxin E4O07_08250 PF14492 Elongation Factor G, domain II E4O07_08250 PF03764 Elongation factor G, domain IV E4O07_08250 PF00009 Elongation factor Tu GTP binding domain E4O07_08250 PF03144 Elongation factor Tu domain 2 E4O07_08250 PF00679 Elongation factor G C-terminus E4O07_08255 PF00177 Ribosomal protein S7p/S5e E4O07_08260 PF00164 Ribosomal protein S12/S23 E4O07_08265 PF11756 Nitrous oxide-stimulated promoter E4O07_08270 PF04304 Protein of unknown function (DUF454) E4O07_08285 PF00692 dUTPase E4O07_08290 PF00013 KH domain E4O07_08290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4O07_08290 PF00575 S1 RNA binding domain E4O07_08290 PF01138 3' exoribonuclease family, domain 1 E4O07_08290 PF03725 3' exoribonuclease family, domain 2 E4O07_08295 PF00312 Ribosomal protein S15 E4O07_08300 PF01687 Riboflavin kinase E4O07_08300 PF06574 FAD synthetase E4O07_08305 PF02719 Polysaccharide biosynthesis protein E4O07_08310 PF01544 CorA-like Mg2+ transporter protein E4O07_08315 PF01743 Poly A polymerase head domain E4O07_08315 PF12627 Probable RNA and SrmB- binding site of polymerase A E4O07_08315 PF13735 tRNA nucleotidyltransferase domain 2 putative E4O07_08330 PF00011 Hsp20/alpha crystallin family E4O07_08335 PF00035 Double-stranded RNA binding motif E4O07_08335 PF14622 Ribonuclease-III-like E4O07_08340 PF00550 Phosphopantetheine attachment site E4O07_08345 PF01783 Ribosomal L32p protein family E4O07_08350 PF13941 MutL protein E4O07_08355 PF02310 B12 binding domain E4O07_08360 PF00375 Sodium:dicarboxylate symporter family E4O07_08365 PF01177 Asp/Glu/Hydantoin racemase E4O07_08370 PF01212 Beta-eliminating lyase E4O07_08375 PF05034 Methylaspartate ammonia-lyase N-terminus E4O07_08375 PF07476 Methylaspartate ammonia-lyase C-terminus E4O07_08385 PF16811 TRAP transporter T-component E4O07_08395 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4O07_08395 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E4O07_08405 PF13742 OB-fold nucleic acid binding domain E4O07_08405 PF02601 Exonuclease VII, large subunit E4O07_08410 PF05362 Lon protease (S16) C-terminal proteolytic domain E4O07_08410 PF13654 AAA domain E4O07_08435 PF16921 Tex protein YqgF-like domain E4O07_08435 PF09371 Tex-like protein N-terminal domain E4O07_08435 PF00575 S1 RNA binding domain E4O07_08435 PF17674 HHH domain E4O07_08445 PF00005 ABC transporter E4O07_08445 PF17755 UvrA DNA-binding domain E4O07_08445 PF17760 UvrA interaction domain E4O07_08450 PF02743 Cache domain E4O07_08450 PF00672 HAMP domain E4O07_08450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_08455 PF10135 Rod binding protein E4O07_08460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O07_08460 PF00460 Flagella basal body rod protein E4O07_08465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4O07_08465 PF00460 Flagella basal body rod protein E4O07_08470 PF00669 Bacterial flagellin N-terminal helical region E4O07_08470 PF00700 Bacterial flagellin C-terminal helical region E4O07_08480 PF00156 Phosphoribosyl transferase domain E4O07_08485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4O07_08485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4O07_08490 PF01226 Formate/nitrite transporter E4O07_08495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4O07_08495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4O07_08500 PF01204 Trehalase E4O07_08515 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4O07_08525 PF00830 Ribosomal L28 family E4O07_08530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O07_08535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_08535 PF00005 ABC transporter E4O07_08540 PF00005 ABC transporter E4O07_08540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_08545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O07_08550 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O07_08550 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_08555 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_08560 PF01180 Dihydroorotate dehydrogenase E4O07_08570 PF00152 tRNA synthetases class II (D, K and N) E4O07_08570 PF01336 OB-fold nucleic acid binding domain E4O07_08575 PF07943 Penicillin-binding protein 5, C-terminal domain E4O07_08575 PF00768 D-alanyl-D-alanine carboxypeptidase E4O07_08580 PF04002 RadC-like JAB domain E4O07_08585 PF00156 Phosphoribosyl transferase domain E4O07_08590 PF03485 Arginyl tRNA synthetase N terminal domain E4O07_08590 PF05746 DALR anticodon binding domain E4O07_08590 PF00750 tRNA synthetases class I (R) E4O07_08595 PF08207 Elongation factor P (EF-P) KOW-like domain E4O07_08595 PF09285 Elongation factor P, C-terminal E4O07_08595 PF01132 Elongation factor P (EF-P) OB domain E4O07_08610 PF13277 YmdB-like protein E4O07_08620 PF00817 impB/mucB/samB family E4O07_08620 PF11799 impB/mucB/samB family C-terminal domain E4O07_08620 PF11798 IMS family HHH motif E4O07_08635 PF03102 NeuB family E4O07_08635 PF08666 SAF domain E4O07_08640 PF12792 CSS motif domain associated with EAL E4O07_08640 PF00563 EAL domain E4O07_08645 PF07009 NusG domain II E4O07_08655 PF03009 Glycerophosphoryl diester phosphodiesterase family E4O07_08660 PF04011 LemA family E4O07_08670 PF02653 Branched-chain amino acid transport system / permease component E4O07_08675 PF02653 Branched-chain amino acid transport system / permease component E4O07_08680 PF00005 ABC transporter E4O07_08685 PF02608 ABC transporter substrate-binding protein PnrA-like E4O07_08785 PF01609 Transposase DDE domain E4O07_08785 PF05598 Transposase domain (DUF772) E4O07_08820 PF01609 Transposase DDE domain E4O07_08820 PF05598 Transposase domain (DUF772) E4O07_08870 PF13808 DDE_Tnp_1-associated E4O07_08870 PF01609 Transposase DDE domain E4O07_08875 PF00574 Clp protease E4O07_08880 PF03186 CobD/Cbib protein E4O07_08890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4O07_08900 PF14804 Jag N-terminus E4O07_08900 PF01424 R3H domain E4O07_08905 PF14849 YidC periplasmic domain E4O07_08905 PF02096 60Kd inner membrane protein E4O07_08910 PF01809 Putative membrane protein insertion efficiency factor E4O07_08915 PF00825 Ribonuclease P E4O07_08920 PF00468 Ribosomal protein L34 E4O07_08930 PF01370 NAD dependent epimerase/dehydratase family E4O07_08940 PF00753 Metallo-beta-lactamase superfamily E4O07_08945 PF04963 Sigma-54 factor, core binding domain E4O07_08945 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4O07_08945 PF04552 Sigma-54, DNA binding domain E4O07_08970 PF00156 Phosphoribosyl transferase domain E4O07_08970 PF13537 Glutamine amidotransferase domain E4O07_08980 PF09820 Predicted AAA-ATPase E4O07_08980 PF08011 PD-(D/E)XK nuclease superfamily E4O07_08995 PF00155 Aminotransferase class I and II E4O07_09015 PF00343 Carbohydrate phosphorylase E4O07_09045 PF04997 RNA polymerase Rpb1, domain 1 E4O07_09045 PF00623 RNA polymerase Rpb1, domain 2 E4O07_09045 PF04983 RNA polymerase Rpb1, domain 3 E4O07_09045 PF05000 RNA polymerase Rpb1, domain 4 E4O07_09045 PF04998 RNA polymerase Rpb1, domain 5 E4O07_09050 PF00562 RNA polymerase Rpb2, domain 6 E4O07_09050 PF04560 RNA polymerase Rpb2, domain 7 E4O07_09050 PF10385 RNA polymerase beta subunit external 1 domain E4O07_09050 PF04565 RNA polymerase Rpb2, domain 3 E4O07_09050 PF04563 RNA polymerase beta subunit E4O07_09050 PF04561 RNA polymerase Rpb2, domain 2 E4O07_09055 PF00542 Ribosomal protein L7/L12 C-terminal domain E4O07_09055 PF16320 Ribosomal protein L7/L12 dimerisation domain E4O07_09060 PF00466 Ribosomal protein L10 E4O07_09065 PF00687 Ribosomal protein L1p/L10e family E4O07_09070 PF03946 Ribosomal protein L11, N-terminal domain E4O07_09070 PF00298 Ribosomal protein L11, RNA binding domain E4O07_09075 PF02357 Transcription termination factor nusG E4O07_09075 PF00467 KOW motif E4O07_09080 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4O07_09090 PF00471 Ribosomal protein L33 E4O07_09110 PF03412 Peptidase C39 family E4O07_09110 PF00664 ABC transporter transmembrane region E4O07_09110 PF00005 ABC transporter E4O07_09115 PF03841 L-seryl-tRNA selenium transferase E4O07_09115 PF12390 Selenocysteine synthase N terminal E4O07_09120 PF09820 Predicted AAA-ATPase E4O07_09120 PF08011 PD-(D/E)XK nuclease superfamily E4O07_09125 PF01541 GIY-YIG catalytic domain E4O07_09125 PF02151 UvrB/uvrC motif E4O07_09125 PF08459 UvrC Helix-hairpin-helix N-terminal E4O07_09130 PF01609 Transposase DDE domain E4O07_09130 PF05598 Transposase domain (DUF772) E4O07_09175 PF00183 Hsp90 protein E4O07_09180 PF00390 Malic enzyme, N-terminal domain E4O07_09180 PF03949 Malic enzyme, NAD binding domain E4O07_09185 PF01202 Shikimate kinase E4O07_09195 PF08011 PD-(D/E)XK nuclease superfamily E4O07_09195 PF09820 Predicted AAA-ATPase E4O07_09200 PF01871 AMMECR1 E4O07_09200 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4O07_09205 PF12796 Ankyrin repeats (3 copies) E4O07_09210 PF02547 Queuosine biosynthesis protein E4O07_09215 PF09820 Predicted AAA-ATPase E4O07_09215 PF08011 PD-(D/E)XK nuclease superfamily E4O07_09235 PF00440 Bacterial regulatory proteins, tetR family E4O07_09235 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O07_09240 PF00005 ABC transporter E4O07_09255 PF00440 Bacterial regulatory proteins, tetR family E4O07_09265 PF05598 Transposase domain (DUF772) E4O07_09265 PF01609 Transposase DDE domain E4O07_09275 PF00664 ABC transporter transmembrane region E4O07_09275 PF00005 ABC transporter E4O07_09280 PF00266 Aminotransferase class-V E4O07_09300 PF01206 Sulfurtransferase TusA E4O07_09315 PF02772 S-adenosylmethionine synthetase, central domain E4O07_09315 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4O07_09315 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4O07_09325 PF01165 Ribosomal protein S21 E4O07_09330 PF01554 MatE E4O07_09335 PF00696 Amino acid kinase family E4O07_09375 PF02254 TrkA-N domain E4O07_09375 PF07885 Ion channel E4O07_09380 PF05343 M42 glutamyl aminopeptidase E4O07_09385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_09385 PF02743 Cache domain E4O07_09385 PF00672 HAMP domain E4O07_09420 PF05175 Methyltransferase small domain E4O07_09420 PF17827 PrmC N-terminal domain E4O07_09425 PF00472 RF-1 domain E4O07_09425 PF03462 PCRF domain E4O07_09455 PF17764 3′ DNA-binding domain (3′BD) E4O07_09455 PF18074 Primosomal protein N C-terminal domain E4O07_09455 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4O07_09455 PF00270 DEAD/DEAH box helicase E4O07_09455 PF00271 Helicase conserved C-terminal domain E4O07_09460 PF03167 Uracil DNA glycosylase superfamily E4O07_09470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_09470 PF00672 HAMP domain E4O07_09470 PF02743 Cache domain E4O07_09480 PF08241 Methyltransferase domain E4O07_09490 PF00072 Response regulator receiver domain E4O07_09490 PF00486 Transcriptional regulatory protein, C terminal E4O07_09495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4O07_09495 PF00512 His Kinase A (phospho-acceptor) domain E4O07_09495 PF01627 Hpt domain E4O07_09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_09495 PF00672 HAMP domain E4O07_09495 PF00072 Response regulator receiver domain E4O07_09510 PF00814 Glycoprotease family E4O07_09530 PF00171 Aldehyde dehydrogenase family E4O07_09535 PF02527 rRNA small subunit methyltransferase G E4O07_09545 PF03781 Sulfatase-modifying factor enzyme 1 E4O07_09570 PF18073 Rubredoxin metal binding domain E4O07_09570 PF06745 KaiC E4O07_09575 PF10609 NUBPL iron-transfer P-loop NTPase E4O07_09580 PF09820 Predicted AAA-ATPase E4O07_09580 PF08011 PD-(D/E)XK nuclease superfamily E4O07_09600 PF00664 ABC transporter transmembrane region E4O07_09600 PF00005 ABC transporter E4O07_09605 PF00005 ABC transporter E4O07_09610 PF01973 Protein of unknown function DUF115 E4O07_09640 PF00149 Calcineurin-like phosphoesterase E4O07_09645 PF09820 Predicted AAA-ATPase E4O07_09645 PF08011 PD-(D/E)XK nuclease superfamily E4O07_09650 PF04055 Radical SAM superfamily E4O07_09675 PF00730 HhH-GPD superfamily base excision DNA repair protein E4O07_09680 PF02887 Pyruvate kinase, alpha/beta domain E4O07_09680 PF00224 Pyruvate kinase, barrel domain E4O07_09680 PF00391 PEP-utilising enzyme, mobile domain E4O07_09720 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4O07_09720 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4O07_09735 PF00005 ABC transporter E4O07_09735 PF00664 ABC transporter transmembrane region E4O07_09740 PF01921 tRNA synthetases class I (K) E4O07_09745 PF01430 Hsp33 protein E4O07_09750 PF02570 Precorrin-8X methylmutase E4O07_09755 PF08011 PD-(D/E)XK nuclease superfamily E4O07_09755 PF09820 Predicted AAA-ATPase E4O07_09760 PF00005 ABC transporter E4O07_09760 PF00664 ABC transporter transmembrane region E4O07_09765 PF00664 ABC transporter transmembrane region E4O07_09765 PF00005 ABC transporter E4O07_09780 PF00005 ABC transporter E4O07_09785 PF00950 ABC 3 transport family E4O07_09795 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4O07_09815 PF02568 Thiamine biosynthesis protein (ThiI) E4O07_09815 PF02926 THUMP domain E4O07_09825 PF00075 RNase H E4O07_09830 PF02229 Transcriptional Coactivator p15 (PC4) E4O07_09835 PF01066 CDP-alcohol phosphatidyltransferase E4O07_09840 PF00342 Phosphoglucose isomerase E4O07_09845 PF01926 50S ribosome-binding GTPase E4O07_09855 PF00849 RNA pseudouridylate synthase E4O07_09875 PF00270 DEAD/DEAH box helicase E4O07_09875 PF00271 Helicase conserved C-terminal domain E4O07_09875 PF17191 RecG wedge domain E4O07_09880 PF00990 Diguanylate cyclase, GGDEF domain E4O07_09885 PF00072 Response regulator receiver domain E4O07_09885 PF00990 Diguanylate cyclase, GGDEF domain E4O07_09900 PF03577 Peptidase family C69 E4O07_09905 PF12729 Four helix bundle sensory module for signal transduction E4O07_09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_09905 PF00672 HAMP domain E4O07_09910 PF12169 DNA polymerase III subunits gamma and tau domain III E4O07_09925 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4O07_09935 PF03880 DbpA RNA binding domain E4O07_09940 PF02830 V4R domain E4O07_09940 PF02954 Bacterial regulatory protein, Fis family E4O07_09940 PF00158 Sigma-54 interaction domain E4O07_09940 PF06505 Activator of aromatic catabolism E4O07_09960 PF00834 Ribulose-phosphate 3 epimerase family E4O07_09970 PF02223 Thymidylate kinase E4O07_09980 PF07244 Surface antigen variable number repeat E4O07_09980 PF01103 Surface antigen E4O07_09990 PF05188 MutS domain II E4O07_09990 PF05192 MutS domain III E4O07_09990 PF05190 MutS family domain IV E4O07_09990 PF00488 MutS domain V E4O07_09990 PF01624 MutS domain I E4O07_10005 PF13635 Domain of unknown function (DUF4143) E4O07_10005 PF13173 AAA domain E4O07_10015 PF07670 Nucleoside recognition E4O07_10020 PF01906 Putative heavy-metal-binding E4O07_10025 PF17391 Urocanase N-terminal domain E4O07_10025 PF01175 Urocanase Rossmann-like domain E4O07_10025 PF17392 Urocanase C-terminal domain E4O07_10030 PF13649 Methyltransferase domain E4O07_10035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_10035 PF02743 Cache domain E4O07_10035 PF00672 HAMP domain E4O07_10055 PF04055 Radical SAM superfamily E4O07_10055 PF18693 TRAM domain E4O07_10055 PF00919 Uncharacterized protein family UPF0004 E4O07_10075 PF02424 ApbE family E4O07_10080 PF01252 Signal peptidase (SPase) II E4O07_10085 PF13545 Crp-like helix-turn-helix domain E4O07_10085 PF00027 Cyclic nucleotide-binding domain E4O07_10095 PF02811 PHP domain E4O07_10100 PF05958 tRNA (Uracil-5-)-methyltransferase E4O07_10120 PF01432 Peptidase family M3 E4O07_10120 PF08439 Oligopeptidase F E4O07_10130 PF02661 Fic/DOC family E4O07_10130 PF12728 Helix-turn-helix domain E4O07_10140 PF01266 FAD dependent oxidoreductase E4O07_10145 PF04324 BFD-like [2Fe-2S] binding domain E4O07_10145 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_10155 PF00005 ABC transporter E4O07_10155 PF00571 CBS domain E4O07_10170 PF01609 Transposase DDE domain E4O07_10170 PF05598 Transposase domain (DUF772) E4O07_10180 PF07702 UTRA domain E4O07_10180 PF00392 Bacterial regulatory proteins, gntR family E4O07_10190 PF06180 Cobalt chelatase (CbiK) E4O07_10195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O07_10200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E4O07_10200 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4O07_10205 PF11849 Domain of unknown function (DUF3369) E4O07_10225 PF08264 Anticodon-binding domain of tRNA E4O07_10225 PF00133 tRNA synthetases class I (I, L, M and V) E4O07_10230 PF00571 CBS domain E4O07_10230 PF00478 IMP dehydrogenase / GMP reductase domain E4O07_10245 PF00464 Serine hydroxymethyltransferase E4O07_10250 PF01066 CDP-alcohol phosphatidyltransferase E4O07_10255 PF00953 Glycosyl transferase family 4 E4O07_10285 PF00291 Pyridoxal-phosphate dependent enzyme E4O07_10285 PF14821 Threonine synthase N terminus E4O07_10320 PF04542 Sigma-70 region 2 E4O07_10320 PF04545 Sigma-70, region 4 E4O07_10320 PF04539 Sigma-70 region 3 E4O07_10330 PF10609 NUBPL iron-transfer P-loop NTPase E4O07_10335 PF00448 SRP54-type protein, GTPase domain E4O07_10340 PF00155 Aminotransferase class I and II E4O07_10345 PF06418 CTP synthase N-terminus E4O07_10345 PF00117 Glutamine amidotransferase class-I E4O07_10370 PF10371 Domain of unknown function E4O07_10370 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4O07_10370 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4O07_10370 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4O07_10370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4O07_10375 PF00691 OmpA family E4O07_10390 PF13280 WYL domain E4O07_10390 PF08279 HTH domain E4O07_10405 PF00005 ABC transporter E4O07_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_10415 PF00072 Response regulator receiver domain E4O07_10415 PF00486 Transcriptional regulatory protein, C terminal E4O07_10420 PF03030 Inorganic H+ pyrophosphatase E4O07_10440 PF01339 CheB methylesterase E4O07_10440 PF00072 Response regulator receiver domain E4O07_10445 PF01739 CheR methyltransferase, SAM binding domain E4O07_10445 PF03705 CheR methyltransferase, all-alpha domain E4O07_10460 PF00005 ABC transporter E4O07_10460 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4O07_10465 PF01195 Peptidyl-tRNA hydrolase E4O07_10475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4O07_10480 PF02743 Cache domain E4O07_10480 PF00672 HAMP domain E4O07_10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_10485 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_10490 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_10490 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O07_10495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_10495 PF00005 ABC transporter E4O07_10500 PF00005 ABC transporter E4O07_10500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_10505 PF16916 Dimerisation domain of Zinc Transporter E4O07_10505 PF01545 Cation efflux family E4O07_10510 PF02557 D-alanyl-D-alanine carboxypeptidase E4O07_10530 PF00226 DnaJ domain E4O07_10530 PF00684 DnaJ central domain E4O07_10530 PF01556 DnaJ C terminal domain E4O07_10535 PF00012 Hsp70 protein E4O07_10540 PF01025 GrpE E4O07_10545 PF12728 Helix-turn-helix domain E4O07_10545 PF02661 Fic/DOC family E4O07_10555 PF00005 ABC transporter E4O07_10560 PF02571 Precorrin-6x reductase CbiJ/CobK E4O07_10565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O07_10565 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4O07_10570 PF09820 Predicted AAA-ATPase E4O07_10570 PF08011 PD-(D/E)XK nuclease superfamily E4O07_10580 PF01554 MatE E4O07_10600 PF01890 Cobalamin synthesis G C-terminus E4O07_10600 PF11761 Cobalamin biosynthesis central region E4O07_10600 PF11760 Cobalamin synthesis G N-terminal E4O07_10605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O07_10610 PF00664 ABC transporter transmembrane region E4O07_10610 PF00005 ABC transporter E4O07_10615 PF00005 ABC transporter E4O07_10615 PF12848 ABC transporter E4O07_10615 PF16326 ABC transporter C-terminal domain E4O07_10625 PF13614 AAA domain E4O07_10630 PF17762 HTH domain found in ParB protein E4O07_10630 PF02195 ParB-like nuclease domain E4O07_10650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4O07_10650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O07_10655 PF00698 Acyl transferase domain E4O07_10670 PF01555 DNA methylase E4O07_10675 PF07055 Enoyl reductase FAD binding domain E4O07_10675 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4O07_10675 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4O07_10680 PF00270 DEAD/DEAH box helicase E4O07_10680 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O07_10680 PF17191 RecG wedge domain E4O07_10685 PF00364 Biotin-requiring enzyme E4O07_10690 PF02785 Biotin carboxylase C-terminal domain E4O07_10690 PF00289 Biotin carboxylase, N-terminal domain E4O07_10690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4O07_10695 PF01039 Carboxyl transferase domain E4O07_10700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4O07_10705 PF00221 Aromatic amino acid lyase E4O07_10720 PF03773 Predicted permease E4O07_10725 PF09323 Domain of unknown function (DUF1980) E4O07_10730 PF17863 AAA lid domain E4O07_10730 PF07726 ATPase family associated with various cellular activities (AAA) E4O07_10770 PF01425 Amidase E4O07_10775 PF02934 GatB/GatE catalytic domain E4O07_10775 PF02637 GatB domain E4O07_11005 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4O07_11010 PF00005 ABC transporter E4O07_11050 PF03063 Prismane/CO dehydrogenase family E4O07_11065 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O07_11070 PF12704 MacB-like periplasmic core domain E4O07_11070 PF02687 FtsX-like permease family E4O07_11070 PF00005 ABC transporter E4O07_11080 PF03781 Sulfatase-modifying factor enzyme 1 E4O07_11110 PF17862 AAA+ lid domain E4O07_11110 PF01434 Peptidase family M41 E4O07_11110 PF00004 ATPase family associated with various cellular activities (AAA) E4O07_11145 PF01048 Phosphorylase superfamily E4O07_11150 PF00571 CBS domain E4O07_11150 PF03471 Transporter associated domain E4O07_11150 PF01595 Cyclin M transmembrane N-terminal domain E4O07_11155 PF02743 Cache domain E4O07_11155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_11155 PF00672 HAMP domain E4O07_11160 PF12671 Putative amidase domain E4O07_11170 PF01680 SOR/SNZ family E4O07_11175 PF10509 Galactokinase galactose-binding signature E4O07_11175 PF08544 GHMP kinases C terminal E4O07_11175 PF00288 GHMP kinases N terminal domain E4O07_11180 PF01171 PP-loop family E4O07_11200 PF07687 Peptidase dimerisation domain E4O07_11200 PF01546 Peptidase family M20/M25/M40 E4O07_11205 PF00210 Ferritin-like domain E4O07_11210 PF01791 DeoC/LacD family aldolase E4O07_11225 PF07722 Peptidase C26 E4O07_11235 PF00005 ABC transporter E4O07_11275 PF00069 Protein kinase domain E4O07_11280 PF00005 ABC transporter E4O07_11285 PF00005 ABC transporter E4O07_11290 PF01702 Queuine tRNA-ribosyltransferase E4O07_11300 PF11967 Recombination protein O N terminal E4O07_11300 PF02565 Recombination protein O C terminal E4O07_11305 PF09382 RQC domain E4O07_11305 PF00570 HRDC domain E4O07_11305 PF16124 RecQ zinc-binding E4O07_11305 PF00270 DEAD/DEAH box helicase E4O07_11305 PF00271 Helicase conserved C-terminal domain E4O07_11310 PF02915 Rubrerythrin E4O07_11315 PF00672 HAMP domain E4O07_11315 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_11315 PF02743 Cache domain E4O07_11320 PF01435 Peptidase family M48 E4O07_11330 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4O07_11330 PF00970 Oxidoreductase FAD-binding domain E4O07_11330 PF00175 Oxidoreductase NAD-binding domain E4O07_11335 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4O07_11335 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_11340 PF08011 PD-(D/E)XK nuclease superfamily E4O07_11340 PF09820 Predicted AAA-ATPase E4O07_11365 PF00672 HAMP domain E4O07_11365 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_11365 PF02743 Cache domain E4O07_11370 PF03466 LysR substrate binding domain E4O07_11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4O07_11385 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4O07_11395 PF13416 Bacterial extracellular solute-binding protein E4O07_11400 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_11405 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_11410 PF00005 ABC transporter E4O07_11410 PF17912 MalK OB fold domain E4O07_11415 PF08240 Alcohol dehydrogenase GroES-like domain E4O07_11415 PF00107 Zinc-binding dehydrogenase E4O07_11420 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4O07_11420 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4O07_11435 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_11440 PF00005 ABC transporter E4O07_11440 PF08402 TOBE domain E4O07_11455 PF00664 ABC transporter transmembrane region E4O07_11455 PF00005 ABC transporter E4O07_11460 PF00664 ABC transporter transmembrane region E4O07_11460 PF00005 ABC transporter E4O07_11460 PF03412 Peptidase C39 family E4O07_11470 PF03577 Peptidase family C69 E4O07_11475 PF02875 Mur ligase family, glutamate ligase domain E4O07_11475 PF08245 Mur ligase middle domain E4O07_11490 PF03023 Lipid II flippase MurJ E4O07_11495 PF03616 Sodium/glutamate symporter E4O07_11505 PF02743 Cache domain E4O07_11505 PF00672 HAMP domain E4O07_11505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_11510 PF03477 ATP cone domain E4O07_11510 PF02867 Ribonucleotide reductase, barrel domain E4O07_11510 PF00317 Ribonucleotide reductase, all-alpha domain E4O07_11515 PF00274 Fructose-bisphosphate aldolase class-I E4O07_11520 PF01850 PIN domain E4O07_11525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4O07_11530 PF00679 Elongation factor G C-terminus E4O07_11530 PF14492 Elongation Factor G, domain II E4O07_11530 PF03764 Elongation factor G, domain IV E4O07_11530 PF00009 Elongation factor Tu GTP binding domain E4O07_11530 PF03144 Elongation factor Tu domain 2 E4O07_11535 PF00664 ABC transporter transmembrane region E4O07_11535 PF00005 ABC transporter E4O07_11540 PF00664 ABC transporter transmembrane region E4O07_11540 PF00005 ABC transporter E4O07_11540 PF03412 Peptidase C39 family E4O07_11550 PF13808 DDE_Tnp_1-associated E4O07_11550 PF01609 Transposase DDE domain E4O07_11555 PF00072 Response regulator receiver domain E4O07_11555 PF00486 Transcriptional regulatory protein, C terminal E4O07_11565 PF00005 ABC transporter E4O07_11595 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E4O07_11605 PF02080 TrkA-C domain E4O07_11605 PF02254 TrkA-N domain E4O07_11610 PF00521 DNA gyrase/topoisomerase IV, subunit A E4O07_11610 PF03989 DNA gyrase C-terminal domain, beta-propeller E4O07_11620 PF07837 Formiminotransferase domain, N-terminal subdomain E4O07_11620 PF02971 Formiminotransferase domain E4O07_11635 PF00883 Cytosol aminopeptidase family, catalytic domain E4O07_11635 PF02789 Cytosol aminopeptidase family, N-terminal domain E4O07_11645 PF00990 Diguanylate cyclase, GGDEF domain E4O07_11665 PF01926 50S ribosome-binding GTPase E4O07_11665 PF06071 Protein of unknown function (DUF933) E4O07_11670 PF01343 Peptidase family S49 E4O07_11685 PF00005 ABC transporter E4O07_11685 PF09383 NIL domain E4O07_11730 PF02511 Thymidylate synthase complementing protein E4O07_11735 PF02386 Cation transport protein E4O07_11740 PF02080 TrkA-C domain E4O07_11740 PF02254 TrkA-N domain E4O07_11750 PF17863 AAA lid domain E4O07_11750 PF07726 ATPase family associated with various cellular activities (AAA) E4O07_11755 PF01595 Cyclin M transmembrane N-terminal domain E4O07_11755 PF03471 Transporter associated domain E4O07_11755 PF00571 CBS domain E4O07_11760 PF03471 Transporter associated domain E4O07_11760 PF00571 CBS domain E4O07_11760 PF01595 Cyclin M transmembrane N-terminal domain E4O07_11770 PF07556 Protein of unknown function (DUF1538) E4O07_11785 PF09382 RQC domain E4O07_11785 PF00570 HRDC domain E4O07_11785 PF16124 RecQ zinc-binding E4O07_11785 PF00270 DEAD/DEAH box helicase E4O07_11785 PF00271 Helicase conserved C-terminal domain E4O07_11800 PF09827 CRISPR associated protein Cas2 E4O07_11810 PF00440 Bacterial regulatory proteins, tetR family E4O07_11810 PF17922 Tetracyclin repressor-like, C-terminal domain E4O07_11815 PF01554 MatE E4O07_11835 PF08281 Sigma-70, region 4 E4O07_11835 PF04542 Sigma-70 region 2 E4O07_11840 PF00268 Ribonucleotide reductase, small chain E4O07_11845 PF01594 AI-2E family transporter E4O07_11850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4O07_11855 PF03601 Conserved hypothetical protein 698 E4O07_11860 PF02743 Cache domain E4O07_11860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_11860 PF00672 HAMP domain E4O07_11865 PF01212 Beta-eliminating lyase E4O07_11870 PF00209 Sodium:neurotransmitter symporter family E4O07_11880 PF00106 short chain dehydrogenase E4O07_11885 PF13411 MerR HTH family regulatory protein E4O07_11915 PF00664 ABC transporter transmembrane region E4O07_11915 PF00005 ABC transporter E4O07_11920 PF00005 ABC transporter E4O07_11920 PF00664 ABC transporter transmembrane region E4O07_11960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O07_11965 PF02504 Fatty acid synthesis protein E4O07_11975 PF03459 TOBE domain E4O07_11975 PF00005 ABC transporter E4O07_11975 PF17912 MalK OB fold domain E4O07_11980 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_11995 PF01966 HD domain E4O07_11995 PF00013 KH domain E4O07_11995 PF12072 Domain of unknown function (DUF3552) E4O07_12000 PF00005 ABC transporter E4O07_12010 PF13784 Fic/DOC family N-terminal E4O07_12010 PF02661 Fic/DOC family E4O07_12015 PF01661 Macro domain E4O07_12020 PF02768 DNA polymerase III beta subunit, C-terminal domain E4O07_12020 PF00712 DNA polymerase III beta subunit, N-terminal domain E4O07_12020 PF02767 DNA polymerase III beta subunit, central domain E4O07_12025 PF02463 RecF/RecN/SMC N terminal domain E4O07_12060 PF02661 Fic/DOC family E4O07_12080 PF00753 Metallo-beta-lactamase superfamily E4O07_12080 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4O07_12090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4O07_12090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4O07_12130 PF07238 PilZ domain E4O07_12145 PF00005 ABC transporter E4O07_12145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_12150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4O07_12150 PF00005 ABC transporter E4O07_12155 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_12155 PF12911 N-terminal TM domain of oligopeptide transport permease C E4O07_12160 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_12165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4O07_12185 PF12557 Cob(I)alamin adenosyltransferase N terminal E4O07_12185 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E4O07_12190 PF03600 Citrate transporter E4O07_12195 PF02595 Glycerate kinase family E4O07_12200 PF02447 GntP family permease E4O07_12215 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4O07_12230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4O07_12240 PF00005 ABC transporter E4O07_12240 PF00664 ABC transporter transmembrane region E4O07_12280 PF02661 Fic/DOC family E4O07_12285 PF00892 EamA-like transporter family E4O07_12290 PF01925 Sulfite exporter TauE/SafE E4O07_12295 PF00962 Adenosine/AMP deaminase E4O07_12305 PF00672 HAMP domain E4O07_12305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_12315 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_12320 PF00005 ABC transporter E4O07_12320 PF08402 TOBE domain E4O07_12340 PF01470 Pyroglutamyl peptidase E4O07_12365 PF02743 Cache domain E4O07_12365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_12365 PF00672 HAMP domain E4O07_12370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4O07_12370 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4O07_12370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4O07_12375 PF17854 FtsK alpha domain E4O07_12375 PF09397 Ftsk gamma domain E4O07_12375 PF01580 FtsK/SpoIIIE family E4O07_12380 PF02673 Bacitracin resistance protein BacA E4O07_12385 PF13476 AAA domain E4O07_12390 PF00149 Calcineurin-like phosphoesterase E4O07_12395 PF00672 HAMP domain E4O07_12395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_12395 PF17202 Single cache domain 3 E4O07_12400 PF00392 Bacterial regulatory proteins, gntR family E4O07_12400 PF07702 UTRA domain E4O07_12405 PF00005 ABC transporter E4O07_12425 PF00258 Flavodoxin E4O07_12440 PF01081 KDPG and KHG aldolase E4O07_12460 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_12460 PF00672 HAMP domain E4O07_12465 PF00211 Adenylate and Guanylate cyclase catalytic domain E4O07_12470 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_12470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O07_12490 PF00196 Bacterial regulatory proteins, luxR family E4O07_12490 PF00072 Response regulator receiver domain E4O07_12495 PF07730 Histidine kinase E4O07_12500 PF07687 Peptidase dimerisation domain E4O07_12500 PF01546 Peptidase family M20/M25/M40 E4O07_12515 PF00005 ABC transporter E4O07_12515 PF08402 TOBE domain E4O07_12520 PF00528 Binding-protein-dependent transport system inner membrane component E4O07_12525 PF01547 Bacterial extracellular solute-binding protein E4O07_12590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4O07_12590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4O07_12600 PF04324 BFD-like [2Fe-2S] binding domain E4O07_12600 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_12605 PF01266 FAD dependent oxidoreductase E4O07_12610 PF07729 FCD domain E4O07_12610 PF00392 Bacterial regulatory proteins, gntR family E4O07_12620 PF00375 Sodium:dicarboxylate symporter family E4O07_12625 PF00440 Bacterial regulatory proteins, tetR family E4O07_12625 PF08361 MAATS-type transcriptional repressor, C-terminal region E4O07_12630 PF00005 ABC transporter E4O07_12630 PF08021 Siderophore-interacting FAD-binding domain E4O07_12630 PF04954 Siderophore-interacting protein E4O07_12630 PF00664 ABC transporter transmembrane region E4O07_12635 PF00005 ABC transporter E4O07_12635 PF00664 ABC transporter transmembrane region E4O07_12640 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4O07_12640 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4O07_12640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4O07_12640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4O07_12645 PF00990 Diguanylate cyclase, GGDEF domain E4O07_12645 PF08448 PAS fold E4O07_12645 PF00563 EAL domain E4O07_12660 PF00990 Diguanylate cyclase, GGDEF domain E4O07_12660 PF00072 Response regulator receiver domain E4O07_12675 PF01207 Dihydrouridine synthase (Dus) E4O07_12705 PF03824 High-affinity nickel-transport protein E4O07_12720 PF04468 PSP1 C-terminal conserved region E4O07_12725 PF03885 Protein of unknown function (DUF327) E4O07_12735 PF01551 Peptidase family M23 E4O07_12735 PF04225 Opacity-associated protein A LysM-like domain E4O07_12740 PF01409 tRNA synthetases class II core domain (F) E4O07_12745 PF00128 Alpha amylase, catalytic domain E4O07_12755 PF12683 Protein of unknown function (DUF3798) E4O07_12760 PF00005 ABC transporter E4O07_12780 PF08011 PD-(D/E)XK nuclease superfamily E4O07_12780 PF09820 Predicted AAA-ATPase E4O07_12785 PF01048 Phosphorylase superfamily E4O07_12790 PF01761 3-dehydroquinate synthase E4O07_12795 PF00266 Aminotransferase class-V E4O07_12805 PF00128 Alpha amylase, catalytic domain E4O07_12805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4O07_12810 PF07676 WD40-like Beta Propeller Repeat E4O07_12810 PF00326 Prolyl oligopeptidase family E4O07_12815 PF01555 DNA methylase E4O07_12820 PF02661 Fic/DOC family E4O07_12820 PF12728 Helix-turn-helix domain E4O07_12825 PF00664 ABC transporter transmembrane region E4O07_12825 PF00005 ABC transporter E4O07_12825 PF03412 Peptidase C39 family E4O07_12830 PF03412 Peptidase C39 family E4O07_12830 PF00005 ABC transporter E4O07_12830 PF00664 ABC transporter transmembrane region E4O07_12835 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4O07_12835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O07_12840 PF13173 AAA domain E4O07_12840 PF13635 Domain of unknown function (DUF4143) E4O07_12850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4O07_12850 PF01565 FAD binding domain E4O07_12855 PF09190 DALR domain E4O07_12855 PF01406 tRNA synthetases class I (C) catalytic domain E4O07_12870 PF01841 Transglutaminase-like superfamily E4O07_12875 PF02386 Cation transport protein E4O07_12880 PF02254 TrkA-N domain E4O07_12880 PF02080 TrkA-C domain E4O07_12885 PF12705 PD-(D/E)XK nuclease superfamily E4O07_12890 PF13361 UvrD-like helicase C-terminal domain E4O07_12890 PF12705 PD-(D/E)XK nuclease superfamily E4O07_12890 PF00580 UvrD/REP helicase N-terminal domain E4O07_12895 PF00391 PEP-utilising enzyme, mobile domain E4O07_12895 PF02896 PEP-utilising enzyme, TIM barrel domain E4O07_12895 PF05524 PEP-utilising enzyme, N-terminal E4O07_12900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4O07_12900 PF01926 50S ribosome-binding GTPase E4O07_12915 PF00672 HAMP domain E4O07_12915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O07_12915 PF02743 Cache domain E4O07_12920 PF16325 Peptidase family U32 C-terminal domain E4O07_12920 PF01136 Peptidase family U32 E4O07_12935 PF00140 Sigma-70 factor, region 1.2 E4O07_12935 PF03979 Sigma-70 factor, region 1.1 E4O07_12935 PF04545 Sigma-70, region 4 E4O07_12935 PF04539 Sigma-70 region 3 E4O07_12935 PF04542 Sigma-70 region 2 E4O07_12945 PF01546 Peptidase family M20/M25/M40 E4O07_12945 PF07687 Peptidase dimerisation domain E4O07_12950 PF00027 Cyclic nucleotide-binding domain E4O07_12950 PF13545 Crp-like helix-turn-helix domain E4O07_12965 PF00365 Phosphofructokinase E4O07_12990 PF13173 AAA domain E4O07_12990 PF13635 Domain of unknown function (DUF4143) E4O07_13045 PF01192 RNA polymerase Rpb6 E4O07_13050 PF00771 FHIPEP family E4O07_13055 PF01312 FlhB HrpN YscU SpaS Family E4O07_13060 PF01311 Bacterial export proteins, family 1 E4O07_13065 PF01313 Bacterial export proteins, family 3 E4O07_13105 PF01979 Amidohydrolase family E4O07_13120 PF09820 Predicted AAA-ATPase E4O07_13120 PF08011 PD-(D/E)XK nuclease superfamily E4O07_13125 PF12419 SNF2 Helicase protein E4O07_13125 PF00271 Helicase conserved C-terminal domain E4O07_13125 PF00176 SNF2 family N-terminal domain E4O07_13130 PF00403 Heavy-metal-associated domain E4O07_13140 PF00293 NUDIX domain E4O07_13145 PF00210 Ferritin-like domain E4O07_13150 PF00578 AhpC/TSA family E4O07_13150 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4O07_13155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4O07_13155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4O07_13160 PF13505 Outer membrane protein beta-barrel domain E4O07_13170 PF00004 ATPase family associated with various cellular activities (AAA) E4O07_13170 PF16193 AAA C-terminal domain E4O07_13170 PF12002 MgsA AAA+ ATPase C terminal E4O07_13175 PF05343 M42 glutamyl aminopeptidase E4O07_13180 PF01476 LysM domain E4O07_13180 PF00756 Putative esterase E4O07_13185 PF01268 Formate--tetrahydrofolate ligase E4O07_13190 PF03129 Anticodon binding domain E4O07_13190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4O07_13210 PF00933 Glycosyl hydrolase family 3 N terminal domain E4O07_13210 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4O07_13250 PF01230 HIT domain E4O07_13270 PF03527 RHS protein E4O07_13270 PF05593 RHS Repeat E4O07_13310 PF00109 Beta-ketoacyl synthase, N-terminal domain E4O07_13310 PF02801 Beta-ketoacyl synthase, C-terminal domain E4O07_13320 PF13193 AMP-binding enzyme C-terminal domain E4O07_13320 PF00501 AMP-binding enzyme E4O07_13325 PF03099 Biotin/lipoate A/B protein ligase family E4O07_13325 PF08279 HTH domain E4O07_13325 PF02237 Biotin protein ligase C terminal domain E4O07_13330 PF01515 Phosphate acetyl/butaryl transferase E4O07_13335 PF13176 Tetratricopeptide repeat E4O07_13335 PF13174 Tetratricopeptide repeat E4O07_13340 PF03960 ArsC family E4O07_13345 PF12848 ABC transporter E4O07_13345 PF00005 ABC transporter E4O07_13355 PF13749 Putative ATP-dependent DNA helicase recG C-terminal E4O07_13355 PF00270 DEAD/DEAH box helicase E4O07_13355 PF17191 RecG wedge domain E4O07_13370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4O07_13370 PF00204 DNA gyrase B E4O07_13370 PF00986 DNA gyrase B subunit, carboxyl terminus E4O07_13370 PF01751 Toprim domain