locus-tag class description E4O04_00005 IPR003593 AAA+ ATPase domain E4O04_00005 IPR001957 Chromosomal replication control, initiator DnaA E4O04_00005 IPR020591 Chromosomal replication control, initiator DnaA-like E4O04_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site E4O04_00005 IPR013317 Chromosomal replication initiator protein DnaA E4O04_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal E4O04_00005 IPR024633 DnaA N-terminal domain E4O04_00005 IPR038454 DnaA, N-terminal domain superfamily E4O04_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00005 IPR010921 Trp repressor/replication initiator E4O04_00010 IPR034160 DNA gyrase subunit B, TOPRIM domain E4O04_00010 IPR006171 TOPRIM domain E4O04_00010 IPR018522 DNA topoisomerase, type IIA, conserved site E4O04_00010 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 E4O04_00010 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal E4O04_00010 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E4O04_00010 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_00010 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_00010 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_00010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_00010 IPR011557 DNA gyrase, subunit B E4O04_00010 IPR002288 DNA gyrase B subunit, C-terminal E4O04_00010 IPR001241 DNA topoisomerase, type IIA E4O04_00025 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain E4O04_00025 IPR033454 RecG, wedge domain E4O04_00025 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00025 IPR038475 RecG, C-terminal domain superfamily E4O04_00025 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_00025 IPR011545 DEAD/DEAH box helicase domain E4O04_00025 IPR012340 Nucleic acid-binding, OB-fold E4O04_00040 IPR002315 Glycyl-tRNA synthetase E4O04_00040 IPR033731 Glycyl-tRNA synthetase-like core domain E4O04_00040 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 E4O04_00040 IPR036621 Anticodon-binding domain superfamily E4O04_00040 IPR004154 Anticodon-binding E4O04_00040 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_00040 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E4O04_00040 IPR022961 Glycine-tRNA ligase, bacterial E4O04_00060 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily E4O04_00060 IPR017853 Glycoside hydrolase superfamily E4O04_00060 IPR019800 Glycoside hydrolase, family 3, active site E4O04_00060 IPR002772 Glycoside hydrolase family 3 C-terminal domain E4O04_00060 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily E4O04_00060 IPR001764 Glycoside hydrolase, family 3, N-terminal E4O04_00100 IPR036265 HIT-like superfamily E4O04_00100 IPR011146 HIT-like domain E4O04_00100 IPR001310 Histidine triad (HIT) protein E4O04_00100 IPR019808 Histidine triad, conserved site E4O04_00100 IPR039384 HINT family E4O04_00110 IPR014031 Beta-ketoacyl synthase, C-terminal E4O04_00110 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 E4O04_00110 IPR016039 Thiolase-like E4O04_00110 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain E4O04_00110 IPR014030 Beta-ketoacyl synthase, N-terminal E4O04_00110 IPR018201 Beta-ketoacyl synthase, active site E4O04_00110 IPR000794 Beta-ketoacyl synthase E4O04_00115 IPR020845 AMP-binding, conserved site E4O04_00115 IPR025110 AMP-binding enzyme, C-terminal domain E4O04_00115 IPR042099 AMP-dependent synthetase-like superfamily E4O04_00115 IPR000873 AMP-dependent synthetase/ligase E4O04_00120 IPR004409 Biotin operon repressor, helix-turn-helix domain E4O04_00120 IPR003142 Biotin protein ligase, C-terminal E4O04_00120 IPR013196 Helix-turn-helix, type 11 E4O04_00120 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_00120 IPR036390 Winged helix DNA-binding domain superfamily E4O04_00120 IPR004408 Biotin--acetyl-CoA-carboxylase ligase E4O04_00120 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain E4O04_00120 IPR008988 Transcriptional repressor, C-terminal E4O04_00120 IPR030855 Bifunctional ligase/repressor BirA E4O04_00125 IPR042113 Phosphate acetyltransferase, domain 1 E4O04_00125 IPR002505 Phosphate acetyl/butaryl transferase E4O04_00125 IPR042112 Phosphate acetyltransferase, domain 2 E4O04_00125 IPR004614 Phosphate acetyltransferase E4O04_00125 IPR012147 Phosphate acetyl/butyryltransferase E4O04_00130 IPR011990 Tetratricopeptide-like helical domain superfamily E4O04_00130 IPR013026 Tetratricopeptide repeat-containing domain E4O04_00130 IPR019734 Tetratricopeptide repeat E4O04_00135 IPR006660 Arsenate reductase-like E4O04_00135 IPR036249 Thioredoxin-like superfamily E4O04_00135 IPR006504 Transcriptional regulator Spx/MgsR E4O04_00140 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00140 IPR003593 AAA+ ATPase domain E4O04_00140 IPR003439 ABC transporter-like E4O04_00140 IPR017871 ABC transporter, conserved site E4O04_00140 IPR032781 ABC-transporter extension domain E4O04_00150 IPR000559 Formate-tetrahydrofolate ligase, FTHFS E4O04_00150 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site E4O04_00150 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00155 IPR029058 Alpha/Beta hydrolase fold E4O04_00155 IPR000801 Putative esterase E4O04_00155 IPR018392 LysM domain E4O04_00155 IPR036779 LysM domain superfamily E4O04_00160 IPR023367 Peptidase M42, domain 2 E4O04_00160 IPR008007 Peptidase M42 E4O04_00165 IPR003593 AAA+ ATPase domain E4O04_00165 IPR032423 AAA C-terminal domain E4O04_00165 IPR003959 ATPase, AAA-type, core E4O04_00165 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal E4O04_00165 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00165 IPR021886 MgsA AAA+ ATPase C-terminal E4O04_00175 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E4O04_00175 IPR027385 Outer membrane protein beta-barrel domain E4O04_00180 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase E4O04_00180 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4O04_00180 IPR036291 NAD(P)-binding domain superfamily E4O04_00180 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site E4O04_00180 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4O04_00185 IPR013766 Thioredoxin domain E4O04_00185 IPR036249 Thioredoxin-like superfamily E4O04_00185 IPR022915 Peroxiredoxin, TDXH subfamily E4O04_00185 IPR019479 Peroxiredoxin, C-terminal E4O04_00185 IPR024706 Peroxiredoxin, AhpC-type E4O04_00185 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant E4O04_00190 IPR002177 DNA-binding protein Dps E4O04_00190 IPR012347 Ferritin-like E4O04_00190 IPR009078 Ferritin-like superfamily E4O04_00190 IPR008331 Ferritin/DPS protein domain E4O04_00190 IPR023188 DNA-binding protein Dps, conserved site E4O04_00195 IPR000086 NUDIX hydrolase domain E4O04_00195 IPR020084 NUDIX hydrolase, conserved site E4O04_00195 IPR015797 NUDIX hydrolase-like domain superfamily E4O04_00195 IPR020476 NUDIX hydrolase E4O04_00205 IPR023298 P-type ATPase, transmembrane domain superfamily E4O04_00205 IPR018303 P-type ATPase, phosphorylation site E4O04_00205 IPR023299 P-type ATPase, cytoplasmic domain N E4O04_00205 IPR017969 Heavy-metal-associated, conserved site E4O04_00205 IPR008250 P-type ATPase, A domain superfamily E4O04_00205 IPR006122 Heavy metal-associated domain, copper ion-binding E4O04_00205 IPR006121 Heavy metal-associated domain, HMA E4O04_00205 IPR036163 Heavy metal-associated domain superfamily E4O04_00205 IPR027256 P-type ATPase, subfamily IB E4O04_00205 IPR001757 P-type ATPase E4O04_00205 IPR023214 HAD superfamily E4O04_00205 IPR036412 HAD-like superfamily E4O04_00210 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_00210 IPR001650 Helicase, C-terminal E4O04_00210 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00210 IPR000330 SNF2-related, N-terminal domain E4O04_00210 IPR022138 Helicase SWF/SNF-related E4O04_00210 IPR038718 SNF2-like, N-terminal domain superfamily E4O04_00215 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_00215 IPR018631 AAA-ATPase-like domain E4O04_00230 IPR032466 Metal-dependent hydrolase E4O04_00230 IPR011059 Metal-dependent hydrolase, composite domain superfamily E4O04_00230 IPR005920 Imidazolonepropionase E4O04_00230 IPR006680 Amidohydrolase-related E4O04_00270 IPR006305 Flagellar biosynthesis protein FliQ E4O04_00270 IPR002191 Bacterial export protein family 3 E4O04_00275 IPR002010 Type III secretion system inner membrane R protein E4O04_00275 IPR006303 Flagellar biosynthesis protein FliR E4O04_00280 IPR006136 Flagellar biosynthetic protein FlhB E4O04_00280 IPR006135 Type III secretion system substrate exporter E4O04_00280 IPR029025 Type III secretion system substrate exporter, C-terminal E4O04_00285 IPR001712 Type III secretion system FHIPEP E4O04_00285 IPR042194 FHIPEP, domain 1 E4O04_00285 IPR042193 FHIPEP, domain 3 E4O04_00285 IPR042196 FHIPEP, domain 4 E4O04_00285 IPR006301 Flagellar biosynthesis protein FlhA E4O04_00290 IPR006110 RNA polymerase, subunit omega/K/RPB6 E4O04_00290 IPR036161 RPB6/omega subunit-like superfamily E4O04_00295 IPR039657 Dimethylallyltransferase E4O04_00295 IPR018022 IPP transferase E4O04_00295 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00330 IPR037523 Vicinal oxygen chelate (VOC) domain E4O04_00330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase E4O04_00345 IPR041682 AAA domain, group 14 E4O04_00345 IPR025420 Domain of unknown function DUF4143 E4O04_00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00370 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type E4O04_00370 IPR022953 ATP-dependent 6-phosphofructokinase E4O04_00370 IPR000023 Phosphofructokinase domain E4O04_00370 IPR035966 Phosphofructokinase superfamily E4O04_00385 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_00385 IPR014710 RmlC-like jelly roll fold E4O04_00385 IPR012318 Crp-type HTH domain E4O04_00385 IPR000595 Cyclic nucleotide-binding domain E4O04_00385 IPR036390 Winged helix DNA-binding domain superfamily E4O04_00385 IPR018488 Cyclic nucleotide-binding, conserved site E4O04_00385 IPR018490 Cyclic nucleotide-binding-like E4O04_00390 IPR036264 Bacterial exopeptidase dimerisation domain E4O04_00390 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria E4O04_00390 IPR002933 Peptidase M20 E4O04_00390 IPR011650 Peptidase M20, dimerisation domain E4O04_00395 IPR013785 Aldolase-type TIM barrel E4O04_00395 IPR007197 Radical SAM E4O04_00395 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase E4O04_00400 IPR014284 RNA polymerase sigma-70 like domain E4O04_00400 IPR000943 RNA polymerase sigma-70 E4O04_00400 IPR009042 RNA polymerase sigma-70 region 1.2 E4O04_00400 IPR007627 RNA polymerase sigma-70 region 2 E4O04_00400 IPR007624 RNA polymerase sigma-70 region 3 E4O04_00400 IPR007630 RNA polymerase sigma-70 region 4 E4O04_00400 IPR007127 RNA polymerase sigma factor 70, region 1.1 E4O04_00400 IPR013324 RNA polymerase sigma factor, region 3/4-like E4O04_00400 IPR012760 RNA polymerase sigma factor RpoD, C-terminal E4O04_00400 IPR028630 RNA polymerase sigma factor RpoD E4O04_00400 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_00400 IPR042189 Sigma-70 factor, region 1.1 superfamily E4O04_00400 IPR013325 RNA polymerase sigma factor, region 2 E4O04_00405 IPR001539 Peptidase U32 E4O04_00405 IPR032525 Peptidase family U32, C-terminal E4O04_00410 IPR029151 Periplasmic sensor-like domain superfamily E4O04_00410 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_00410 IPR003660 HAMP domain E4O04_00410 IPR033479 Double Cache domain 1 E4O04_00415 IPR015864 FAD synthetase E4O04_00415 IPR004821 Cytidyltransferase-like domain E4O04_00415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_00415 IPR023465 Riboflavin kinase domain superfamily E4O04_00415 IPR023468 Riboflavin kinase E4O04_00415 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic E4O04_00415 IPR002606 Riboflavin kinase, bacterial E4O04_00420 IPR004841 Amino acid permease/ SLC12A domain E4O04_00420 IPR004840 Amino acid permease, conserved site E4O04_00420 IPR011265 GABA permease E4O04_00425 IPR013149 Alcohol dehydrogenase, C-terminal E4O04_00425 IPR013154 Alcohol dehydrogenase, N-terminal E4O04_00425 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E4O04_00425 IPR011032 GroES-like superfamily E4O04_00425 IPR036291 NAD(P)-binding domain superfamily E4O04_00425 IPR020843 Polyketide synthase, enoylreductase domain E4O04_00430 IPR013785 Aldolase-type TIM barrel E4O04_00430 IPR002915 DeoC/FbaB/ lacD aldolase E4O04_00430 IPR010210 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase E4O04_00430 IPR041720 Aldolase FbaB-like, archaeal-type E4O04_00435 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta E4O04_00435 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta E4O04_00440 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site E4O04_00440 IPR010186 Glycine reductase, selenoprotein B E4O04_00440 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family E4O04_00445 IPR010186 Glycine reductase, selenoprotein B E4O04_00445 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family E4O04_00455 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent E4O04_00455 IPR015590 Aldehyde dehydrogenase domain E4O04_00455 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E4O04_00455 IPR016161 Aldehyde/histidinol dehydrogenase E4O04_00455 IPR016163 Aldehyde dehydrogenase, C-terminal E4O04_00455 IPR016162 Aldehyde dehydrogenase, N-terminal E4O04_00470 IPR031166 EngA-type guanine nucleotide-binding (G) domain E4O04_00470 IPR016484 GTP-binding protein EngA E4O04_00470 IPR006073 GTP binding domain E4O04_00470 IPR032859 GTPase Der, C-terminal KH-domain-like E4O04_00470 IPR015946 K homology domain-like, alpha/beta E4O04_00470 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00470 IPR005225 Small GTP-binding protein domain E4O04_00475 IPR006318 Phosphotransferase system, enzyme I-like E4O04_00475 IPR008279 PEP-utilising enzyme, mobile domain E4O04_00475 IPR008731 Phosphotransferase system, enzyme I N-terminal E4O04_00475 IPR000121 PEP-utilising enzyme, C-terminal E4O04_00475 IPR036618 PtsI, HPr-binding domain superfamily E4O04_00475 IPR018274 PEP-utilising enzyme, active site E4O04_00475 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E4O04_00475 IPR024692 Phosphotransferase system, enzyme I E4O04_00475 IPR036637 Phosphohistidine domain superfamily E4O04_00475 IPR040442 Pyruvate kinase-like domain superfamily E4O04_00475 IPR023151 PEP-utilising enzyme, conserved site E4O04_00480 IPR000212 DNA helicase, UvrD/REP type E4O04_00480 IPR011604 Exonuclease, phage-type/RecB, C-terminal E4O04_00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00480 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type E4O04_00480 IPR011335 Restriction endonuclease type II-like E4O04_00480 IPR014016 UvrD-like helicase, ATP-binding domain E4O04_00480 IPR034739 UvrD/AddA helicase, N-terminal E4O04_00480 IPR014152 DNA helicase subunit AddA E4O04_00480 IPR014017 UvrD-like DNA helicase, C-terminal E4O04_00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00485 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type E4O04_00490 IPR003148 Regulator of K+ conductance, N-terminal E4O04_00490 IPR006036 Potassium uptake protein TrkA E4O04_00490 IPR006037 Regulator of K+ conductance, C-terminal E4O04_00490 IPR036291 NAD(P)-binding domain superfamily E4O04_00490 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E4O04_00495 IPR003445 Cation transporter E4O04_00495 IPR004772 TrkH potassium transport family E4O04_00500 IPR002931 Transglutaminase-like E4O04_00500 IPR038765 Papain-like cysteine peptidase superfamily E4O04_00515 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR E4O04_00515 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E4O04_00515 IPR015803 Cysteine-tRNA ligase E4O04_00515 IPR032678 tRNA synthetases class I, catalytic domain E4O04_00515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_00515 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase E4O04_00520 IPR036318 FAD-binding, type PCMH-like superfamily E4O04_00520 IPR016166 FAD-binding domain, PCMH-type E4O04_00520 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase E4O04_00520 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal E4O04_00520 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily E4O04_00520 IPR006094 FAD linked oxidase, N-terminal E4O04_00520 IPR016169 FAD-binding, type PCMH, subdomain 2 E4O04_00520 IPR016167 FAD-binding, type PCMH, subdomain 1 E4O04_00530 IPR041682 AAA domain, group 14 E4O04_00530 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00530 IPR025420 Domain of unknown function DUF4143 E4O04_00535 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_00535 IPR023753 FAD/NAD(P)-binding domain E4O04_00535 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily E4O04_00535 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O04_00540 IPR003593 AAA+ ATPase domain E4O04_00540 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_00540 IPR011527 ABC transporter type 1, transmembrane domain E4O04_00540 IPR017871 ABC transporter, conserved site E4O04_00540 IPR005897 Peptidase C39, ABC-type bacteriocin transporter E4O04_00540 IPR005074 Peptidase C39, bacteriocin processing E4O04_00540 IPR039421 Type I protein exporter E4O04_00540 IPR003439 ABC transporter-like E4O04_00540 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00545 IPR003593 AAA+ ATPase domain E4O04_00545 IPR011527 ABC transporter type 1, transmembrane domain E4O04_00545 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_00545 IPR017871 ABC transporter, conserved site E4O04_00545 IPR033839 Lacticin 481 processing peptidase E4O04_00545 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00545 IPR003439 ABC transporter-like E4O04_00545 IPR039421 Type I protein exporter E4O04_00545 IPR005074 Peptidase C39, bacteriocin processing E4O04_00550 IPR041657 Helix-turn-helix domain, group 17 E4O04_00550 IPR010093 SinI-like, DNA-binding domain E4O04_00550 IPR036597 Fido-like domain superfamily E4O04_00550 IPR003812 Fido domain E4O04_00550 IPR040198 Fido domain-containing protein E4O04_00555 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class E4O04_00555 IPR002941 DNA methylase N-4/N-6 E4O04_00555 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_00555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_00560 IPR011042 Six-bladed beta-propeller, TolB-like E4O04_00560 IPR029058 Alpha/Beta hydrolase fold E4O04_00560 IPR011659 WD40-like Beta Propeller E4O04_00560 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain E4O04_00585 IPR013780 Glycosyl hydrolase, all-beta E4O04_00585 IPR004193 Glycoside hydrolase, family 13, N-terminal E4O04_00585 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E4O04_00585 IPR011837 Glycogen debranching enzyme, GlgX type E4O04_00585 IPR017853 Glycoside hydrolase superfamily E4O04_00585 IPR013783 Immunoglobulin-like fold E4O04_00585 IPR014756 Immunoglobulin E-set E4O04_00595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_00595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_00595 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_00595 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal E4O04_00595 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E4O04_00595 IPR000192 Aminotransferase class V domain E4O04_00595 IPR016454 Cysteine desulfurase E4O04_00600 IPR030960 3-dehydroquinate synthase domain E4O04_00600 IPR016037 3-dehydroquinate synthase AroB E4O04_00600 IPR030963 3-dehydroquinate synthase family E4O04_00605 IPR035994 Nucleoside phosphorylase superfamily E4O04_00605 IPR000845 Nucleoside phosphorylase domain E4O04_00605 IPR010049 MTA/SAH nucleosidase E4O04_00610 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_00610 IPR018631 AAA-ATPase-like domain E4O04_00630 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00630 IPR015861 ABC transporter, ribose import, RbsA E4O04_00630 IPR003439 ABC transporter-like E4O04_00630 IPR017871 ABC transporter, conserved site E4O04_00630 IPR003593 AAA+ ATPase domain E4O04_00635 IPR024258 Protein of unknown function DUF3798 E4O04_00645 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E4O04_00645 IPR013780 Glycosyl hydrolase, all-beta E4O04_00645 IPR017853 Glycoside hydrolase superfamily E4O04_00650 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit E4O04_00650 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_00650 IPR002319 Phenylalanyl-tRNA synthetase E4O04_00650 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal E4O04_00655 IPR007340 Opacity-associated protein A E4O04_00655 IPR016047 Peptidase M23 E4O04_00655 IPR011055 Duplicated hybrid motif E4O04_00665 IPR005585 Protein of unknown function DUF327 E4O04_00665 IPR024042 TM1646-like domain superfamily E4O04_00670 IPR007557 PSP1, C-terminal E4O04_00685 IPR011541 Nickel/cobalt transporter, high-affinity E4O04_00695 IPR036679 FlgN-like superfamily E4O04_00715 IPR018517 tRNA-dihydrouridine synthase, conserved site E4O04_00715 IPR001269 tRNA-dihydrouridine synthase E4O04_00715 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 E4O04_00715 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal E4O04_00715 IPR035587 DUS-like, FMN-binding domain E4O04_00715 IPR013785 Aldolase-type TIM barrel E4O04_00730 IPR011006 CheY-like superfamily E4O04_00730 IPR000160 GGDEF domain E4O04_00730 IPR029787 Nucleotide cyclase E4O04_00730 IPR001789 Signal transduction response regulator, receiver domain E4O04_00745 IPR035965 PAS domain superfamily E4O04_00745 IPR013656 PAS fold-4 E4O04_00745 IPR000014 PAS domain E4O04_00745 IPR029787 Nucleotide cyclase E4O04_00745 IPR000160 GGDEF domain E4O04_00745 IPR001633 EAL domain E4O04_00745 IPR035919 EAL domain superfamily E4O04_00750 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal E4O04_00750 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain E4O04_00750 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal E4O04_00750 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily E4O04_00750 IPR002082 Aspartate carbamoyltransferase E4O04_00750 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily E4O04_00750 IPR006130 Aspartate/ornithine carbamoyltransferase E4O04_00750 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding E4O04_00750 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily E4O04_00755 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_00755 IPR011917 ABC transporter, lipid A export, MsbA E4O04_00755 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00755 IPR017871 ABC transporter, conserved site E4O04_00755 IPR011527 ABC transporter type 1, transmembrane domain E4O04_00755 IPR003593 AAA+ ATPase domain E4O04_00755 IPR003439 ABC transporter-like E4O04_00755 IPR039421 Type I protein exporter E4O04_00760 IPR003593 AAA+ ATPase domain E4O04_00760 IPR007037 Siderophore-interacting protein, C-terminal domain E4O04_00760 IPR017938 Riboflavin synthase-like beta-barrel E4O04_00760 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00760 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E4O04_00760 IPR011527 ABC transporter type 1, transmembrane domain E4O04_00760 IPR013113 FAD-binding 9, siderophore-interacting E4O04_00760 IPR017871 ABC transporter, conserved site E4O04_00760 IPR003439 ABC transporter-like E4O04_00760 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_00760 IPR017927 FAD-binding domain, ferredoxin reductase-type E4O04_00765 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E4O04_00765 IPR013572 Transcription regulator MAATS, C-terminal E4O04_00765 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E4O04_00765 IPR001647 DNA-binding HTH domain, TetR-type E4O04_00765 IPR009057 Homeobox-like domain superfamily E4O04_00770 IPR001991 Sodium:dicarboxylate symporter E4O04_00770 IPR036458 Sodium:dicarboxylate symporter superfamily E4O04_00780 IPR011711 GntR, C-terminal E4O04_00780 IPR008920 Transcription regulator FadR/GntR, C-terminal E4O04_00780 IPR000524 Transcription regulator HTH, GntR E4O04_00780 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_00780 IPR036390 Winged helix DNA-binding domain superfamily E4O04_00785 IPR006076 FAD dependent oxidoreductase E4O04_00785 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_00790 IPR007419 BFD-like [2Fe-2S]-binding domain E4O04_00790 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily E4O04_00790 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_00790 IPR023753 FAD/NAD(P)-binding domain E4O04_00790 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B E4O04_00800 IPR018484 Carbohydrate kinase, FGGY, N-terminal E4O04_00800 IPR033676 Autoinducer-2 kinase E4O04_00800 IPR000577 Carbohydrate kinase, FGGY E4O04_00800 IPR018485 Carbohydrate kinase, FGGY, C-terminal E4O04_00825 IPR006059 Bacterial extracellular solute-binding protein E4O04_00825 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria E4O04_00825 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter E4O04_00830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_00830 IPR035906 MetI-like superfamily E4O04_00830 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU E4O04_00835 IPR008995 Molybdate/tungstate binding, C-terminal E4O04_00835 IPR013611 Transport-associated OB, type 2 E4O04_00835 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit E4O04_00835 IPR017871 ABC transporter, conserved site E4O04_00835 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00835 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA E4O04_00835 IPR003593 AAA+ ATPase domain E4O04_00835 IPR003439 ABC transporter-like E4O04_00850 IPR017439 Amidohydrolase E4O04_00850 IPR036264 Bacterial exopeptidase dimerisation domain E4O04_00850 IPR002933 Peptidase M20 E4O04_00850 IPR011650 Peptidase M20, dimerisation domain E4O04_00855 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain E4O04_00855 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_00855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_00860 IPR000792 Transcription regulator LuxR, C-terminal E4O04_00860 IPR001789 Signal transduction response regulator, receiver domain E4O04_00860 IPR016032 Signal transduction response regulator, C-terminal effector E4O04_00860 IPR011006 CheY-like superfamily E4O04_00870 IPR017758 Coenzyme A disulphide reductase E4O04_00870 IPR023536 Coenzyme A disulphide reductase, staphyolococci E4O04_00870 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_00870 IPR023753 FAD/NAD(P)-binding domain E4O04_00870 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily E4O04_00870 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O04_00875 IPR029787 Nucleotide cyclase E4O04_00875 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_00880 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_00880 IPR003660 HAMP domain E4O04_00880 IPR029787 Nucleotide cyclase E4O04_00885 IPR000887 KDPG/KHG aldolase E4O04_00885 IPR013785 Aldolase-type TIM barrel E4O04_00885 IPR031337 KDPG/KHG aldolase, active site 1 E4O04_00885 IPR031338 KDPG/KHG aldolase, active site 2 E4O04_00925 IPR010087 Flavodoxin, short chain E4O04_00925 IPR008254 Flavodoxin/nitric oxide synthase E4O04_00925 IPR001226 Flavodoxin, conserved site E4O04_00925 IPR029039 Flavoprotein-like superfamily E4O04_00945 IPR003593 AAA+ ATPase domain E4O04_00945 IPR003439 ABC transporter-like E4O04_00945 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00950 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_00950 IPR011663 UbiC transcription regulator-associated E4O04_00950 IPR036390 Winged helix DNA-binding domain superfamily E4O04_00950 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily E4O04_00950 IPR000524 Transcription regulator HTH, GntR E4O04_00955 IPR004090 Chemotaxis methyl-accepting receptor E4O04_00955 IPR003660 HAMP domain E4O04_00955 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_00955 IPR033463 Single cache domain 3 E4O04_00955 IPR029151 Periplasmic sensor-like domain superfamily E4O04_00960 IPR026843 Nuclease SbcCD subunit D, C-terminal domain E4O04_00960 IPR004593 Nuclease SbcCD subunit D E4O04_00960 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain E4O04_00960 IPR029052 Metallo-dependent phosphatase-like E4O04_00960 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E4O04_00965 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00965 IPR038729 Rad50/SbcC-type AAA domain E4O04_00965 IPR004592 Nuclease SbcC, gammaproteobacteria type E4O04_00970 IPR003824 Undecaprenyl-diphosphatase UppP E4O04_00975 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_00975 IPR036390 Winged helix DNA-binding domain superfamily E4O04_00975 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_00975 IPR018541 FtsK gamma domain E4O04_00975 IPR003593 AAA+ ATPase domain E4O04_00975 IPR041027 FtsK alpha domain E4O04_00975 IPR002543 FtsK domain E4O04_00980 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal E4O04_00980 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain E4O04_00980 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain E4O04_00980 IPR013785 Aldolase-type TIM barrel E4O04_00980 IPR007229 Nicotinate phosphoribosyltransferase family E4O04_00980 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase E4O04_00980 IPR006405 Nicotinate phosphoribosyltransferase pncB-type E4O04_00985 IPR033479 Double Cache domain 1 E4O04_00985 IPR003660 HAMP domain E4O04_00985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_00985 IPR029151 Periplasmic sensor-like domain superfamily E4O04_00985 IPR000727 Target SNARE coiled-coil homology domain E4O04_01015 IPR033694 Pyroglutamyl peptidase I, Cys active site E4O04_01015 IPR033693 Pyroglutamyl peptidase I, Glu active site E4O04_01015 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like E4O04_01015 IPR000816 Peptidase C15, pyroglutamyl peptidase I E4O04_01015 IPR029762 Pyroglutamyl peptidase I, bacterial-type E4O04_01015 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily E4O04_01035 IPR003593 AAA+ ATPase domain E4O04_01035 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA E4O04_01035 IPR003439 ABC transporter-like E4O04_01035 IPR017871 ABC transporter, conserved site E4O04_01035 IPR008995 Molybdate/tungstate binding, C-terminal E4O04_01035 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01035 IPR013611 Transport-associated OB, type 2 E4O04_01040 IPR011866 Sulphate ABC transporter, permease protein CysW E4O04_01040 IPR035906 MetI-like superfamily E4O04_01040 IPR005667 Sulphate ABC transporter permease protein 2 E4O04_01040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_01050 IPR003660 HAMP domain E4O04_01050 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_01060 IPR001365 Adenosine/AMP deaminase domain E4O04_01060 IPR032466 Metal-dependent hydrolase E4O04_01065 IPR002781 Transmembrane protein TauE-like E4O04_01070 IPR000620 EamA domain E4O04_01075 IPR036597 Fido-like domain superfamily E4O04_01075 IPR003812 Fido domain E4O04_01115 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01115 IPR039421 Type I protein exporter E4O04_01115 IPR011917 ABC transporter, lipid A export, MsbA E4O04_01115 IPR017871 ABC transporter, conserved site E4O04_01115 IPR003439 ABC transporter-like E4O04_01115 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01115 IPR003593 AAA+ ATPase domain E4O04_01115 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01125 IPR018063 SAM-dependent methyltransferase RsmI, conserved site E4O04_01125 IPR008189 rRNA small subunit methyltransferase I E4O04_01125 IPR014776 Tetrapyrrole methylase, subdomain 2 E4O04_01125 IPR014777 Tetrapyrrole methylase, subdomain 1 E4O04_01125 IPR035996 Tetrapyrrole methylase superfamily E4O04_01125 IPR000878 Tetrapyrrole methylase E4O04_01140 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 E4O04_01140 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding E4O04_01140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_01140 IPR033910 Glutamyl-tRNA synthetase E4O04_01140 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain E4O04_01140 IPR000924 Glutamyl/glutaminyl-tRNA synthetase E4O04_01140 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial E4O04_01155 IPR003474 Gluconate transporter E4O04_01160 IPR018193 Glycerate kinase, flavodoxin-like fold E4O04_01160 IPR036129 Glycerate kinase superfamily E4O04_01160 IPR018197 Glycerate kinase, restriction-enzyme-like fold E4O04_01160 IPR004381 Glycerate kinase E4O04_01165 IPR004680 Citrate transporter-like domain E4O04_01165 IPR000802 Arsenical pump membrane protein, ArsB E4O04_01170 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain E4O04_01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01170 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR E4O04_01190 IPR000914 Solute-binding protein family 5 domain E4O04_01190 IPR023765 Solute-binding protein family 5, conserved site E4O04_01190 IPR039424 Solute-binding protein family 5 E4O04_01190 IPR030678 Peptide/nickel binding protein, MppA-type E4O04_01195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_01195 IPR035906 MetI-like superfamily E4O04_01200 IPR035906 MetI-like superfamily E4O04_01200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_01200 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E4O04_01205 IPR003439 ABC transporter-like E4O04_01205 IPR017871 ABC transporter, conserved site E4O04_01205 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01205 IPR003593 AAA+ ATPase domain E4O04_01210 IPR003593 AAA+ ATPase domain E4O04_01210 IPR017871 ABC transporter, conserved site E4O04_01210 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_01210 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01210 IPR003439 ABC transporter-like E4O04_01225 IPR009875 PilZ domain E4O04_01265 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily E4O04_01265 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_01265 IPR023546 Methylated-DNA--protein-cysteine methyltransferase E4O04_01265 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain E4O04_01265 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain E4O04_01265 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site E4O04_01265 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding E4O04_01275 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain E4O04_01275 IPR001279 Metallo-beta-lactamase E4O04_01275 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E4O04_01275 IPR017782 Hydroxyacylglutathione hydrolase E4O04_01275 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain E4O04_01295 IPR003812 Fido domain E4O04_01295 IPR032675 Leucine-rich repeat domain superfamily E4O04_01295 IPR036597 Fido-like domain superfamily E4O04_01295 IPR003591 Leucine-rich repeat, typical subtype E4O04_01310 IPR029060 PIN-like domain superfamily E4O04_01310 IPR022907 VapC family E4O04_01310 IPR002716 PIN domain E4O04_01345 IPR001238 DNA-binding, RecF E4O04_01345 IPR018078 DNA-binding, RecF, conserved site E4O04_01345 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01345 IPR003395 RecF/RecN/SMC, N-terminal E4O04_01345 IPR042174 DNA-binding RecF, domain 2 E4O04_01350 IPR001001 DNA polymerase III, beta sliding clamp E4O04_01350 IPR022637 DNA polymerase III, beta sliding clamp, central E4O04_01350 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal E4O04_01350 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal E4O04_01355 IPR002589 Macro domain E4O04_01360 IPR003812 Fido domain E4O04_01360 IPR036597 Fido-like domain superfamily E4O04_01360 IPR026287 Protein adenylyltransferase SoFic-like E4O04_01360 IPR025758 Fic/DOC N-terminal E4O04_01360 IPR040198 Fido domain-containing protein E4O04_01370 IPR039421 Type I protein exporter E4O04_01370 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01370 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01370 IPR003439 ABC transporter-like E4O04_01370 IPR017871 ABC transporter, conserved site E4O04_01370 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01370 IPR003593 AAA+ ATPase domain E4O04_01375 IPR003607 HD/PDEase domain E4O04_01375 IPR006674 HD domain E4O04_01375 IPR006675 HDIG domain E4O04_01375 IPR004087 K Homology domain E4O04_01375 IPR004088 K Homology domain, type 1 E4O04_01375 IPR036612 K Homology domain, type 1 superfamily E4O04_01375 IPR017705 Ribonuclease Y E4O04_01375 IPR022711 Ribonuclease Y, N-terminal E4O04_01385 IPR035906 MetI-like superfamily E4O04_01385 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like E4O04_01385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_01390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_01390 IPR035906 MetI-like superfamily E4O04_01395 IPR040582 MalK, OB fold domain E4O04_01395 IPR008995 Molybdate/tungstate binding, C-terminal E4O04_01395 IPR017871 ABC transporter, conserved site E4O04_01395 IPR003439 ABC transporter-like E4O04_01395 IPR003593 AAA+ ATPase domain E4O04_01395 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01395 IPR005116 Transport-associated OB, type 1 E4O04_01405 IPR003664 Fatty acid synthesis PlsX protein E4O04_01405 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit E4O04_01410 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta E4O04_01410 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O04_01410 IPR016039 Thiolase-like E4O04_01455 IPR017871 ABC transporter, conserved site E4O04_01455 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01455 IPR039421 Type I protein exporter E4O04_01455 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01455 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01455 IPR003439 ABC transporter-like E4O04_01455 IPR003593 AAA+ ATPase domain E4O04_01460 IPR003439 ABC transporter-like E4O04_01460 IPR003593 AAA+ ATPase domain E4O04_01460 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01460 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01460 IPR017871 ABC transporter, conserved site E4O04_01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01460 IPR039421 Type I protein exporter E4O04_01490 IPR000551 MerR-type HTH domain E4O04_01490 IPR009061 Putative DNA-binding domain superfamily E4O04_01495 IPR002347 Short-chain dehydrogenase/reductase SDR E4O04_01495 IPR020904 Short-chain dehydrogenase/reductase, conserved site E4O04_01495 IPR036291 NAD(P)-binding domain superfamily E4O04_01510 IPR000175 Sodium:neurotransmitter symporter E4O04_01510 IPR037272 Sodium:neurotransmitter symporter superfamily E4O04_01515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_01515 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_01515 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase E4O04_01515 IPR011166 Beta-eliminating lyase family E4O04_01515 IPR013440 Tryptophanase E4O04_01515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_01515 IPR018176 Tryptophanase, conserved site E4O04_01520 IPR029151 Periplasmic sensor-like domain superfamily E4O04_01520 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_01520 IPR003660 HAMP domain E4O04_01520 IPR033479 Double Cache domain 1 E4O04_01520 IPR004090 Chemotaxis methyl-accepting receptor E4O04_01525 IPR018383 Uncharacterised protein family UPF0324, prokaryote E4O04_01530 IPR004547 Glucosamine-6-phosphate isomerase E4O04_01530 IPR018321 Glucosamine-6-phosphate isomerase, conserved site E4O04_01530 IPR037171 NagB/RpiA transferase-like E4O04_01530 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase E4O04_01535 IPR002549 Transmembrane protein TqsA-like E4O04_01540 IPR033909 Ribonucleotide reductase small subunit E4O04_01540 IPR030475 Ribonucleotide reductase small subunit, acitve site E4O04_01540 IPR000358 Ribonucleotide reductase small subunit family E4O04_01540 IPR009078 Ferritin-like superfamily E4O04_01540 IPR012348 Ribonucleotide reductase-like E4O04_01545 IPR039425 RNA polymerase sigma-70 like E4O04_01545 IPR014284 RNA polymerase sigma-70 like domain E4O04_01545 IPR014294 RNA polymerase sigma-W, bacillaceae E4O04_01545 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site E4O04_01545 IPR007627 RNA polymerase sigma-70 region 2 E4O04_01545 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 E4O04_01545 IPR013325 RNA polymerase sigma factor, region 2 E4O04_01545 IPR013324 RNA polymerase sigma factor, region 3/4-like E4O04_01545 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_01565 IPR002528 Multi antimicrobial extrusion protein E4O04_01570 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E4O04_01570 IPR041612 YfiR, C-terminal E4O04_01570 IPR009057 Homeobox-like domain superfamily E4O04_01570 IPR001647 DNA-binding HTH domain, TetR-type E4O04_01580 IPR021127 CRISPR-associated endonuclease Cas2 E4O04_01580 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 E4O04_01585 IPR002729 CRISPR-associated protein Cas1 E4O04_01585 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain E4O04_01585 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain E4O04_01585 IPR019855 CRISPR-associated protein Cas1, NMENI subtype E4O04_01590 IPR028629 CRISPR-associated endonuclease Cas9 E4O04_01590 IPR032239 CRISPR-associated endonuclease Cas9, bridge helix E4O04_01590 IPR032237 CRISPR-associated endonuclease Cas9, PAM-interacting domain E4O04_01590 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe E4O04_01590 IPR033114 Cas9-type HNH domain E4O04_01590 IPR003615 HNH nuclease E4O04_01595 IPR004589 DNA helicase, ATP-dependent, RecQ type E4O04_01595 IPR011545 DEAD/DEAH box helicase domain E4O04_01595 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial E4O04_01595 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_01595 IPR010997 HRDC-like superfamily E4O04_01595 IPR002121 HRDC domain E4O04_01595 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01595 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain E4O04_01595 IPR018982 RQC domain E4O04_01595 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_01595 IPR001650 Helicase, C-terminal E4O04_01620 IPR005170 Transporter-associated domain E4O04_01620 IPR036318 FAD-binding, type PCMH-like superfamily E4O04_01620 IPR002550 CNNM, transmembrane domain E4O04_01620 IPR000644 CBS domain E4O04_01620 IPR016169 FAD-binding, type PCMH, subdomain 2 E4O04_01625 IPR000644 CBS domain E4O04_01625 IPR002550 CNNM, transmembrane domain E4O04_01625 IPR036318 FAD-binding, type PCMH-like superfamily E4O04_01625 IPR005170 Transporter-associated domain E4O04_01625 IPR016169 FAD-binding, type PCMH, subdomain 2 E4O04_01630 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01630 IPR041628 ChlI/MoxR, AAA lid domain E4O04_01630 IPR011703 ATPase, AAA-3 E4O04_01640 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E4O04_01640 IPR003148 Regulator of K+ conductance, N-terminal E4O04_01640 IPR036291 NAD(P)-binding domain superfamily E4O04_01640 IPR006037 Regulator of K+ conductance, C-terminal E4O04_01645 IPR003445 Cation transporter E4O04_01645 IPR004772 TrkH potassium transport family E4O04_01650 IPR003669 Thymidylate synthase ThyX E4O04_01650 IPR036098 Thymidylate synthase ThyX superfamily E4O04_01695 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01695 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain E4O04_01695 IPR017871 ABC transporter, conserved site E4O04_01695 IPR003593 AAA+ ATPase domain E4O04_01695 IPR018449 NIL domain E4O04_01695 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal E4O04_01695 IPR003439 ABC transporter-like E4O04_01695 IPR026253 Methionine import ATP-binding protein MetN E4O04_01710 IPR002142 Peptidase S49 E4O04_01710 IPR004635 Peptidase S49, SppA E4O04_01710 IPR004634 Peptidase S49, protease IV E4O04_01710 IPR029045 ClpP/crotonase-like domain superfamily E4O04_01715 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01715 IPR012675 Beta-grasp domain superfamily E4O04_01715 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 E4O04_01715 IPR004095 TGS E4O04_01715 IPR006073 GTP binding domain E4O04_01715 IPR031167 OBG-type guanine nucleotide-binding (G) domain E4O04_01715 IPR023192 TGS-like domain superfamily E4O04_01715 IPR013029 YchF, C-terminal domain E4O04_01715 IPR041706 YchF, N-terminal E4O04_01715 IPR012676 TGS-like E4O04_01730 IPR013785 Aldolase-type TIM barrel E4O04_01730 IPR023663 NADPH dehydrogenase E4O04_01730 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal E4O04_01740 IPR029062 Class I glutamine amidotransferase-like E4O04_01740 IPR005320 Peptidase S51 E4O04_01750 IPR029787 Nucleotide cyclase E4O04_01750 IPR039435 Diguanylate cyclase DosC, globin sensor domain E4O04_01750 IPR012292 Globin/Protoglobin E4O04_01750 IPR009050 Globin-like superfamily E4O04_01750 IPR000160 GGDEF domain E4O04_01755 IPR002559 Transposase, IS4-like E4O04_01755 IPR008490 Transposase InsH, N-terminal E4O04_01765 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal E4O04_01765 IPR023042 Peptidase M17, leucine aminopeptidase E4O04_01765 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal E4O04_01765 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B E4O04_01780 IPR022384 Formiminotransferase catalytic domain superfamily E4O04_01780 IPR013802 Formiminotransferase, C-terminal subdomain E4O04_01780 IPR012886 Formiminotransferase, N-terminal subdomain E4O04_01780 IPR004227 Formiminotransferase catalytic domain E4O04_01780 IPR037070 Formiminotransferase, C-terminal subdomain superfamily E4O04_01780 IPR037064 Formiminotransferase, N-terminal subdomain superfamily E4O04_01790 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat E4O04_01790 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal E4O04_01790 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E4O04_01790 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal E4O04_01790 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta E4O04_01790 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily E4O04_01790 IPR005743 DNA gyrase, subunit A E4O04_01795 IPR036291 NAD(P)-binding domain superfamily E4O04_01795 IPR006037 Regulator of K+ conductance, C-terminal E4O04_01795 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E4O04_01795 IPR003148 Regulator of K+ conductance, N-terminal E4O04_01805 IPR007473 Ribosomal RNA large subunit methyltransferase J E4O04_01805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_01805 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_01835 IPR003593 AAA+ ATPase domain E4O04_01835 IPR003439 ABC transporter-like E4O04_01835 IPR017871 ABC transporter, conserved site E4O04_01835 IPR015854 ABC transporter, lipoprotein release, LolD E4O04_01835 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01845 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_01845 IPR039420 Transcriptional regulatory protein WalR-like E4O04_01845 IPR001789 Signal transduction response regulator, receiver domain E4O04_01845 IPR001867 OmpR/PhoB-type DNA-binding domain E4O04_01845 IPR011006 CheY-like superfamily E4O04_01845 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response E4O04_01855 IPR003593 AAA+ ATPase domain E4O04_01855 IPR039421 Type I protein exporter E4O04_01855 IPR005074 Peptidase C39, bacteriocin processing E4O04_01855 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01855 IPR033839 Lacticin 481 processing peptidase E4O04_01855 IPR017871 ABC transporter, conserved site E4O04_01855 IPR003439 ABC transporter-like E4O04_01855 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01855 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01860 IPR011917 ABC transporter, lipid A export, MsbA E4O04_01860 IPR003593 AAA+ ATPase domain E4O04_01860 IPR017871 ABC transporter, conserved site E4O04_01860 IPR003439 ABC transporter-like E4O04_01860 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01860 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01860 IPR039421 Type I protein exporter E4O04_01860 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01865 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_01865 IPR004540 Translation elongation factor EFG/EF2 E4O04_01865 IPR000640 Elongation factor EFG, domain V-like E4O04_01865 IPR005225 Small GTP-binding protein domain E4O04_01865 IPR035647 EF-G domain III/V-like E4O04_01865 IPR009022 Elongation factor G, domain III E4O04_01865 IPR005517 Translation elongation factor EFG/EF2, domain IV E4O04_01865 IPR041095 Elongation Factor G, domain II E4O04_01865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_01865 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_01865 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01865 IPR031157 Tr-type G domain, conserved site E4O04_01865 IPR004161 Translation elongation factor EFTu-like, domain 2 E4O04_01865 IPR035649 EFG, domain V E4O04_01865 IPR000795 Transcription factor, GTP-binding domain E4O04_01875 IPR007159 SpoVT-AbrB domain E4O04_01875 IPR037914 SpoVT-AbrB domain superfamily E4O04_01880 IPR029060 PIN-like domain superfamily E4O04_01880 IPR002716 PIN domain E4O04_01880 IPR022907 VapC family E4O04_01885 IPR013785 Aldolase-type TIM barrel E4O04_01885 IPR000741 Fructose-bisphosphate aldolase, class-I E4O04_01885 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type E4O04_01890 IPR005144 ATP-cone domain E4O04_01890 IPR013346 Ribonucleotide reductase, class I , alpha subunit E4O04_01890 IPR000788 Ribonucleotide reductase large subunit, C-terminal E4O04_01890 IPR013509 Ribonucleotide reductase large subunit, N-terminal E4O04_01890 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal E4O04_01890 IPR039718 Ribonucleoside-diphosphate reductase large subunit E4O04_01895 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E4O04_01895 IPR029151 Periplasmic sensor-like domain superfamily E4O04_01895 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_01895 IPR003660 HAMP domain E4O04_01895 IPR033479 Double Cache domain 1 E4O04_01905 IPR004445 Sodium/glutamate symport carrier protein GltS E4O04_01910 IPR004268 Peptidoglycan biosynthesis protein MurJ E4O04_01925 IPR039421 Type I protein exporter E4O04_01925 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01925 IPR017871 ABC transporter, conserved site E4O04_01925 IPR011917 ABC transporter, lipid A export, MsbA E4O04_01925 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01925 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01925 IPR003593 AAA+ ATPase domain E4O04_01925 IPR003439 ABC transporter-like E4O04_01935 IPR036565 Mur-like, catalytic domain superfamily E4O04_01935 IPR004101 Mur ligase, C-terminal E4O04_01935 IPR036615 Mur ligase, C-terminal domain superfamily E4O04_01935 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase E4O04_01935 IPR013221 Mur ligase, central E4O04_01940 IPR005322 Peptidase C69, dipeptidase A E4O04_01950 IPR003439 ABC transporter-like E4O04_01950 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01950 IPR005074 Peptidase C39, bacteriocin processing E4O04_01950 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E4O04_01950 IPR003593 AAA+ ATPase domain E4O04_01950 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01950 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01950 IPR039421 Type I protein exporter E4O04_01955 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01955 IPR003593 AAA+ ATPase domain E4O04_01955 IPR011527 ABC transporter type 1, transmembrane domain E4O04_01955 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_01955 IPR003439 ABC transporter-like E4O04_01955 IPR039421 Type I protein exporter E4O04_01955 IPR011917 ABC transporter, lipid A export, MsbA E4O04_01955 IPR017871 ABC transporter, conserved site E4O04_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01970 IPR005895 ABC transporter, haem export, CcmA E4O04_01970 IPR003439 ABC transporter-like E4O04_01980 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal E4O04_01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01980 IPR003495 CobW/HypB/UreG, nucleotide-binding domain E4O04_01985 IPR013149 Alcohol dehydrogenase, C-terminal E4O04_01985 IPR020843 Polyketide synthase, enoylreductase domain E4O04_01985 IPR036291 NAD(P)-binding domain superfamily E4O04_01985 IPR011032 GroES-like superfamily E4O04_01985 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E4O04_01985 IPR013154 Alcohol dehydrogenase, N-terminal E4O04_01990 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC E4O04_01990 IPR003439 ABC transporter-like E4O04_01990 IPR017871 ABC transporter, conserved site E4O04_01990 IPR008995 Molybdate/tungstate binding, C-terminal E4O04_01990 IPR040582 MalK, OB fold domain E4O04_01990 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_01990 IPR003593 AAA+ ATPase domain E4O04_01995 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_01995 IPR035906 MetI-like superfamily E4O04_02000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_02000 IPR035906 MetI-like superfamily E4O04_02005 IPR006059 Bacterial extracellular solute-binding protein E4O04_02005 IPR006061 Solute-binding family 1, conserved site E4O04_02015 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type E4O04_02015 IPR008275 CoA enzyme activase E4O04_02025 IPR010327 FldB/FldC dehydratase alpha/beta subunit E4O04_02045 IPR036390 Winged helix DNA-binding domain superfamily E4O04_02045 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_02045 IPR005119 LysR, substrate-binding E4O04_02045 IPR000847 Transcription regulator HTH, LysR E4O04_02050 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_02050 IPR033479 Double Cache domain 1 E4O04_02050 IPR003660 HAMP domain E4O04_02050 IPR029151 Periplasmic sensor-like domain superfamily E4O04_02050 IPR029787 Nucleotide cyclase E4O04_02070 IPR018631 AAA-ATPase-like domain E4O04_02070 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_02075 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_02075 IPR018631 AAA-ATPase-like domain E4O04_02080 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_02080 IPR018631 AAA-ATPase-like domain E4O04_02085 IPR028261 Dihydroprymidine dehydrogenase domain II E4O04_02085 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_02085 IPR023753 FAD/NAD(P)-binding domain E4O04_02085 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 E4O04_02085 IPR009051 Alpha-helical ferredoxin E4O04_02090 IPR001433 Oxidoreductase FAD/NAD(P)-binding E4O04_02090 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E4O04_02090 IPR017927 FAD-binding domain, ferredoxin reductase-type E4O04_02090 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain E4O04_02090 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain E4O04_02090 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit E4O04_02090 IPR017938 Riboflavin synthase-like beta-barrel E4O04_02100 IPR001915 Peptidase M48 E4O04_02100 IPR022919 Peptidase M48, protease HtpX, putative E4O04_02105 IPR033479 Double Cache domain 1 E4O04_02105 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_02105 IPR029151 Periplasmic sensor-like domain superfamily E4O04_02105 IPR029787 Nucleotide cyclase E4O04_02105 IPR003660 HAMP domain E4O04_02160 IPR039421 Type I protein exporter E4O04_02160 IPR005074 Peptidase C39, bacteriocin processing E4O04_02160 IPR005897 Peptidase C39, ABC-type bacteriocin transporter E4O04_02160 IPR017871 ABC transporter, conserved site E4O04_02160 IPR003439 ABC transporter-like E4O04_02160 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_02160 IPR011527 ABC transporter type 1, transmembrane domain E4O04_02160 IPR003593 AAA+ ATPase domain E4O04_02160 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02175 IPR012347 Ferritin-like E4O04_02175 IPR009040 Ferritin-like diiron domain E4O04_02175 IPR009078 Ferritin-like superfamily E4O04_02175 IPR024934 Rubredoxin-like domain E4O04_02175 IPR003251 Rubrerythrin E4O04_02180 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_02180 IPR018982 RQC domain E4O04_02180 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain E4O04_02180 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02180 IPR002121 HRDC domain E4O04_02180 IPR010997 HRDC-like superfamily E4O04_02180 IPR001650 Helicase, C-terminal E4O04_02180 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_02180 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial E4O04_02180 IPR004589 DNA helicase, ATP-dependent, RecQ type E4O04_02180 IPR011545 DEAD/DEAH box helicase domain E4O04_02185 IPR012340 Nucleic acid-binding, OB-fold E4O04_02185 IPR022572 DNA replication/recombination mediator RecO, N-terminal E4O04_02185 IPR003717 Recombination protein O, RecO E4O04_02185 IPR037278 ARFGAP/RecO-like zinc finger E4O04_02195 IPR036511 Queuine tRNA-ribosyltransferase-like E4O04_02195 IPR004803 tRNA-guanine transglycosylase E4O04_02195 IPR002616 tRNA-guanine(15) transglycosylase-like E4O04_02200 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02200 IPR003439 ABC transporter-like E4O04_02200 IPR039421 Type I protein exporter E4O04_02200 IPR017871 ABC transporter, conserved site E4O04_02200 IPR011527 ABC transporter type 1, transmembrane domain E4O04_02200 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_02200 IPR003593 AAA+ ATPase domain E4O04_02205 IPR011527 ABC transporter type 1, transmembrane domain E4O04_02205 IPR017871 ABC transporter, conserved site E4O04_02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02205 IPR039421 Type I protein exporter E4O04_02205 IPR003439 ABC transporter-like E4O04_02205 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_02205 IPR003593 AAA+ ATPase domain E4O04_02210 IPR007822 Lanthionine synthetase C-like E4O04_02210 IPR011009 Protein kinase-like domain superfamily E4O04_02210 IPR000719 Protein kinase domain E4O04_02250 IPR003439 ABC transporter-like E4O04_02250 IPR017871 ABC transporter, conserved site E4O04_02250 IPR011527 ABC transporter type 1, transmembrane domain E4O04_02250 IPR003593 AAA+ ATPase domain E4O04_02250 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02250 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_02250 IPR039421 Type I protein exporter E4O04_02260 IPR029062 Class I glutamine amidotransferase-like E4O04_02260 IPR011697 Peptidase C26 E4O04_02260 IPR017926 Glutamine amidotransferase E4O04_02265 IPR002293 Amino acid/polyamine transporter I E4O04_02280 IPR013785 Aldolase-type TIM barrel E4O04_02280 IPR011343 Deoxyribose-phosphate aldolase E4O04_02280 IPR002915 DeoC/FbaB/ lacD aldolase E4O04_02280 IPR028581 Deoxyribose-phosphate aldolase type I E4O04_02285 IPR041719 Ferritin, prokaryotic-type E4O04_02285 IPR009078 Ferritin-like superfamily E4O04_02285 IPR008331 Ferritin/DPS protein domain E4O04_02285 IPR012347 Ferritin-like E4O04_02285 IPR001519 Ferritin E4O04_02285 IPR009040 Ferritin-like diiron domain E4O04_02290 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site E4O04_02290 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria E4O04_02290 IPR002933 Peptidase M20 E4O04_02290 IPR011650 Peptidase M20, dimerisation domain E4O04_02290 IPR036264 Bacterial exopeptidase dimerisation domain E4O04_02295 IPR003876 Arginine deiminase E4O04_02310 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal E4O04_02310 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase E4O04_02310 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type E4O04_02310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_02315 IPR036554 GHMP kinase, C-terminal domain superfamily E4O04_02315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_02315 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_02315 IPR006206 Mevalonate/galactokinase E4O04_02315 IPR006203 GHMP kinase, ATP-binding, conserved site E4O04_02315 IPR006204 GHMP kinase N-terminal domain E4O04_02315 IPR013750 GHMP kinase, C-terminal domain E4O04_02315 IPR019539 Galactokinase galactose-binding domain E4O04_02315 IPR019741 Galactokinase, conserved site E4O04_02315 IPR022963 Galactokinase, bacterial E4O04_02315 IPR000705 Galactokinase E4O04_02320 IPR011060 Ribulose-phosphate binding barrel E4O04_02320 IPR033755 PdxS/SNZ N-terminal domain E4O04_02320 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ E4O04_02320 IPR013785 Aldolase-type TIM barrel E4O04_02330 IPR024301 Putative amidase domain E4O04_02335 IPR029151 Periplasmic sensor-like domain superfamily E4O04_02335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_02335 IPR003660 HAMP domain E4O04_02335 IPR033479 Double Cache domain 1 E4O04_02340 IPR005170 Transporter-associated domain E4O04_02340 IPR000644 CBS domain E4O04_02340 IPR002550 CNNM, transmembrane domain E4O04_02340 IPR036318 FAD-binding, type PCMH-like superfamily E4O04_02340 IPR016169 FAD-binding, type PCMH, subdomain 2 E4O04_02345 IPR000845 Nucleoside phosphorylase domain E4O04_02345 IPR035994 Nucleoside phosphorylase superfamily E4O04_02345 IPR004402 Purine nucleoside phosphorylase DeoD-type E4O04_02345 IPR018016 Nucleoside phosphorylase, conserved site E4O04_02370 IPR041569 AAA ATPase, AAA+ lid domain E4O04_02370 IPR037219 Peptidase M41-like E4O04_02370 IPR000642 Peptidase M41 E4O04_02370 IPR003593 AAA+ ATPase domain E4O04_02370 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02370 IPR005936 Peptidase, FtsH E4O04_02370 IPR003959 ATPase, AAA-type, core E4O04_02370 IPR003960 ATPase, AAA-type, conserved site E4O04_02380 IPR023298 P-type ATPase, transmembrane domain superfamily E4O04_02380 IPR023299 P-type ATPase, cytoplasmic domain N E4O04_02380 IPR018303 P-type ATPase, phosphorylation site E4O04_02380 IPR036412 HAD-like superfamily E4O04_02380 IPR001757 P-type ATPase E4O04_02380 IPR027256 P-type ATPase, subfamily IB E4O04_02380 IPR023214 HAD superfamily E4O04_02380 IPR008250 P-type ATPase, A domain superfamily E4O04_02400 IPR005532 Sulfatase-modifying factor enzyme E4O04_02400 IPR016187 C-type lectin fold E4O04_02400 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_02415 IPR017911 ABC transporter, macrolide export, ATP-binding domain E4O04_02415 IPR017871 ABC transporter, conserved site E4O04_02415 IPR003439 ABC transporter-like E4O04_02415 IPR003838 ABC transporter permease protein domain E4O04_02415 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02415 IPR025857 MacB-like periplasmic core domain E4O04_02415 IPR003593 AAA+ ATPase domain E4O04_02420 IPR004400 Urease accessory protein UreG E4O04_02420 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02420 IPR003495 CobW/HypB/UreG, nucleotide-binding domain E4O04_02435 IPR018631 AAA-ATPase-like domain E4O04_02435 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_02445 IPR029151 Periplasmic sensor-like domain superfamily E4O04_02445 IPR003660 HAMP domain E4O04_02445 IPR033479 Double Cache domain 1 E4O04_02445 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_02460 IPR003593 AAA+ ATPase domain E4O04_02460 IPR003439 ABC transporter-like E4O04_02460 IPR017871 ABC transporter, conserved site E4O04_02460 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02465 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain E4O04_02565 IPR002559 Transposase, IS4-like E4O04_02565 IPR008490 Transposase InsH, N-terminal E4O04_02580 IPR003593 AAA+ ATPase domain E4O04_02580 IPR011527 ABC transporter type 1, transmembrane domain E4O04_02580 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_02580 IPR017871 ABC transporter, conserved site E4O04_02580 IPR003439 ABC transporter-like E4O04_02580 IPR039421 Type I protein exporter E4O04_02580 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02585 IPR011527 ABC transporter type 1, transmembrane domain E4O04_02585 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_02585 IPR003439 ABC transporter-like E4O04_02585 IPR017871 ABC transporter, conserved site E4O04_02585 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02585 IPR039421 Type I protein exporter E4O04_02585 IPR003593 AAA+ ATPase domain E4O04_02590 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02590 IPR017871 ABC transporter, conserved site E4O04_02590 IPR003439 ABC transporter-like E4O04_02590 IPR003593 AAA+ ATPase domain E4O04_02605 IPR001647 DNA-binding HTH domain, TetR-type E4O04_02605 IPR009057 Homeobox-like domain superfamily E4O04_02605 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal E4O04_02605 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E4O04_02755 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 E4O04_02755 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site E4O04_02755 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 E4O04_02755 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like E4O04_02755 IPR018027 Asn/Gln amidotransferase E4O04_02755 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic E4O04_02755 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E E4O04_02755 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit E4O04_02755 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain E4O04_02760 IPR000120 Amidase E4O04_02760 IPR020556 Amidase, conserved site E4O04_02760 IPR036928 Amidase signature (AS) superfamily E4O04_02760 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit E4O04_02760 IPR023631 Amidase signature domain E4O04_02800 IPR041628 ChlI/MoxR, AAA lid domain E4O04_02800 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02800 IPR011703 ATPase, AAA-3 E4O04_02805 IPR015402 Protein of unknown function DUF1980 E4O04_02810 IPR005524 Predicted permease DUF318 E4O04_02825 IPR008948 L-Aspartase-like E4O04_02825 IPR022313 Phenylalanine/histidine ammonia-lyases, active site E4O04_02825 IPR001106 Aromatic amino acid lyase E4O04_02825 IPR005921 Histidine ammonia-lyase E4O04_02825 IPR024083 Fumarase/histidase, N-terminal E4O04_02830 IPR001095 Acetyl-CoA carboxylase, alpha subunit E4O04_02830 IPR029045 ClpP/crotonase-like domain superfamily E4O04_02830 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal E4O04_02835 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal E4O04_02835 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit E4O04_02835 IPR034733 Acetyl-CoA carboxylase E4O04_02835 IPR029045 ClpP/crotonase-like domain superfamily E4O04_02840 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase E4O04_02840 IPR013815 ATP-grasp fold, subdomain 1 E4O04_02840 IPR005481 Biotin carboxylase-like, N-terminal domain E4O04_02840 IPR011764 Biotin carboxylation domain E4O04_02840 IPR005482 Biotin carboxylase, C-terminal E4O04_02840 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain E4O04_02840 IPR016185 Pre-ATP-grasp domain superfamily E4O04_02840 IPR011054 Rudiment single hybrid motif E4O04_02840 IPR011761 ATP-grasp fold E4O04_02845 IPR001249 Acetyl-CoA biotin carboxyl carrier E4O04_02845 IPR000089 Biotin/lipoyl attachment E4O04_02845 IPR001882 Biotin-binding site E4O04_02845 IPR011053 Single hybrid motif E4O04_02850 IPR033454 RecG, wedge domain E4O04_02850 IPR038475 RecG, C-terminal domain superfamily E4O04_02850 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain E4O04_02850 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02850 IPR012340 Nucleic acid-binding, OB-fold E4O04_02850 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_02850 IPR011545 DEAD/DEAH box helicase domain E4O04_02860 IPR024906 Enoyl reductase FAD binding domain E4O04_02860 IPR010758 Trans-2-enoyl-CoA reductase E4O04_02860 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative E4O04_02865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_02865 IPR001091 Restriction/modification DNA-methylase E4O04_02865 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site E4O04_02865 IPR002941 DNA methylase N-4/N-6 E4O04_02875 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase E4O04_02875 IPR036291 NAD(P)-binding domain superfamily E4O04_02875 IPR020904 Short-chain dehydrogenase/reductase, conserved site E4O04_02875 IPR002347 Short-chain dehydrogenase/reductase SDR E4O04_02880 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase E4O04_02880 IPR001227 Acyl transferase domain superfamily E4O04_02880 IPR014043 Acyl transferase E4O04_02880 IPR024925 Malonyl CoA-acyl carrier protein transacylase E4O04_02880 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type E4O04_02880 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding E4O04_02885 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4O04_02885 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal E4O04_02885 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 E4O04_02885 IPR016039 Thiolase-like E4O04_02905 IPR036086 ParB/Sulfiredoxin superfamily E4O04_02905 IPR003115 ParB/Sulfiredoxin E4O04_02905 IPR004437 ParB/RepB/Spo0J partition protein E4O04_02905 IPR041468 ParB/Spo0J, HTH domain E4O04_02910 IPR025669 AAA domain E4O04_02910 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02920 IPR003593 AAA+ ATPase domain E4O04_02920 IPR032524 ABC transporter Uup, C-terminal E4O04_02920 IPR032781 ABC-transporter extension domain E4O04_02920 IPR003439 ABC transporter-like E4O04_02920 IPR017871 ABC transporter, conserved site E4O04_02920 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02920 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily E4O04_02925 IPR039421 Type I protein exporter E4O04_02925 IPR011527 ABC transporter type 1, transmembrane domain E4O04_02925 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_02925 IPR003439 ABC transporter-like E4O04_02925 IPR017871 ABC transporter, conserved site E4O04_02925 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02925 IPR003593 AAA+ ATPase domain E4O04_02930 IPR035996 Tetrapyrrole methylase superfamily E4O04_02930 IPR000878 Tetrapyrrole methylase E4O04_02930 IPR014777 Tetrapyrrole methylase, subdomain 1 E4O04_02930 IPR014776 Tetrapyrrole methylase, subdomain 2 E4O04_02930 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase E4O04_02930 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site E4O04_02935 IPR021745 Cobalamin biosynthesis central region E4O04_02935 IPR021744 Cobalamin synthesis G, N-terminal E4O04_02935 IPR036518 CobE/GbiG C-terminal domain superfamily E4O04_02935 IPR038029 GbiG N-terminal domain superfamily E4O04_02935 IPR002750 CobE/GbiG C-terminal domain E4O04_02955 IPR002528 Multi antimicrobial extrusion protein E4O04_02965 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_02965 IPR018631 AAA-ATPase-like domain E4O04_02970 IPR014777 Tetrapyrrole methylase, subdomain 1 E4O04_02970 IPR006363 Precorrin-3B C17-methyltransferase domain E4O04_02970 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain E4O04_02970 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site E4O04_02970 IPR035996 Tetrapyrrole methylase superfamily E4O04_02970 IPR014776 Tetrapyrrole methylase, subdomain 2 E4O04_02970 IPR000878 Tetrapyrrole methylase E4O04_02975 IPR003723 Precorrin-6x reductase E4O04_02980 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_02980 IPR017871 ABC transporter, conserved site E4O04_02980 IPR003593 AAA+ ATPase domain E4O04_02980 IPR003439 ABC transporter-like E4O04_02990 IPR036597 Fido-like domain superfamily E4O04_02990 IPR003812 Fido domain E4O04_02990 IPR010093 SinI-like, DNA-binding domain E4O04_02990 IPR041657 Helix-turn-helix domain, group 17 E4O04_02990 IPR040198 Fido domain-containing protein E4O04_02995 IPR000740 GrpE nucleotide exchange factor E4O04_02995 IPR013805 GrpE nucleotide exchange factor, coiled-coil E4O04_02995 IPR009012 GrpE nucleotide exchange factor, head E4O04_03000 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily E4O04_03000 IPR013126 Heat shock protein 70 family E4O04_03000 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily E4O04_03000 IPR018181 Heat shock protein 70, conserved site E4O04_03000 IPR012725 Chaperone DnaK E4O04_03005 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily E4O04_03005 IPR012724 Chaperone DnaJ E4O04_03005 IPR002939 Chaperone DnaJ, C-terminal E4O04_03005 IPR001623 DnaJ domain E4O04_03005 IPR018253 DnaJ domain, conserved site E4O04_03005 IPR008971 HSP40/DnaJ peptide-binding E4O04_03005 IPR001305 Heat shock protein DnaJ, cysteine-rich domain E4O04_03005 IPR036869 Chaperone J-domain superfamily E4O04_03025 IPR003709 Peptidase M15B E4O04_03025 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily E4O04_03030 IPR002524 Cation efflux protein E4O04_03030 IPR027470 Cation efflux protein, cytoplasmic domain E4O04_03030 IPR027469 Cation efflux transmembrane domain superfamily E4O04_03030 IPR036837 Cation efflux protein, cytoplasmic domain superfamily E4O04_03035 IPR003439 ABC transporter-like E4O04_03035 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_03035 IPR017871 ABC transporter, conserved site E4O04_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03035 IPR003593 AAA+ ATPase domain E4O04_03040 IPR017871 ABC transporter, conserved site E4O04_03040 IPR003439 ABC transporter-like E4O04_03040 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03040 IPR003593 AAA+ ATPase domain E4O04_03045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_03045 IPR035906 MetI-like superfamily E4O04_03045 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E4O04_03050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_03050 IPR035906 MetI-like superfamily E4O04_03055 IPR000727 Target SNARE coiled-coil homology domain E4O04_03055 IPR029151 Periplasmic sensor-like domain superfamily E4O04_03055 IPR003660 HAMP domain E4O04_03055 IPR033479 Double Cache domain 1 E4O04_03055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_03055 IPR004090 Chemotaxis methyl-accepting receptor E4O04_03060 IPR001986 Enolpyruvate transferase domain E4O04_03060 IPR036968 Enolpyruvate transferase domain superfamily E4O04_03060 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta E4O04_03060 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase E4O04_03070 IPR001328 Peptidyl-tRNA hydrolase E4O04_03070 IPR018171 Peptidyl-tRNA hydrolase, conserved site E4O04_03070 IPR036416 Peptidyl-tRNA hydrolase superfamily E4O04_03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03075 IPR030921 LPS export ABC transporter, ATP-binding protein LptB E4O04_03075 IPR003593 AAA+ ATPase domain E4O04_03075 IPR017871 ABC transporter, conserved site E4O04_03075 IPR003439 ABC transporter-like E4O04_03075 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal E4O04_03090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_03090 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily E4O04_03090 IPR026024 Chemotaxis protein methyltransferase CheR E4O04_03090 IPR000780 MCP methyltransferase, CheR-type E4O04_03090 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal E4O04_03090 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal E4O04_03095 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type E4O04_03095 IPR035909 Methylesterase CheB, C-terminal E4O04_03095 IPR011006 CheY-like superfamily E4O04_03095 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase E4O04_03095 IPR001789 Signal transduction response regulator, receiver domain E4O04_03115 IPR004131 Pyrophosphate-energised proton pump E4O04_03120 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_03120 IPR039420 Transcriptional regulatory protein WalR-like E4O04_03120 IPR001867 OmpR/PhoB-type DNA-binding domain E4O04_03120 IPR016032 Signal transduction response regulator, C-terminal effector E4O04_03120 IPR001789 Signal transduction response regulator, receiver domain E4O04_03120 IPR011006 CheY-like superfamily E4O04_03125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E4O04_03125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E4O04_03125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_03125 IPR005467 Histidine kinase domain E4O04_03125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E4O04_03125 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_03130 IPR003593 AAA+ ATPase domain E4O04_03130 IPR003439 ABC transporter-like E4O04_03130 IPR017871 ABC transporter, conserved site E4O04_03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03145 IPR001034 DeoR-type HTH domain E4O04_03145 IPR013196 Helix-turn-helix, type 11 E4O04_03145 IPR028349 Protein PafC E4O04_03145 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_03145 IPR036390 Winged helix DNA-binding domain superfamily E4O04_03145 IPR026881 WYL domain E4O04_03160 IPR036737 OmpA-like domain superfamily E4O04_03160 IPR006665 OmpA-like domain E4O04_03160 IPR006664 Outer membrane protein, bacterial E4O04_03160 IPR006690 Outer membrane protein, OmpA-like, conserved site E4O04_03170 IPR003601 DNA topoisomerase, type IA, domain 2 E4O04_03170 IPR023406 DNA topoisomerase, type IA, active site E4O04_03170 IPR013497 DNA topoisomerase, type IA, central E4O04_03170 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 E4O04_03170 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 E4O04_03170 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 E4O04_03170 IPR023405 DNA topoisomerase, type IA, core domain E4O04_03170 IPR003602 DNA topoisomerase, type IA, DNA-binding domain E4O04_03170 IPR005738 DNA topoisomerase III E4O04_03170 IPR006171 TOPRIM domain E4O04_03170 IPR034144 DNA topoisomerase 3-like, TOPRIM domain E4O04_03170 IPR000380 DNA topoisomerase, type IA E4O04_03180 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03180 IPR003688 Type IV secretion system protein TraG/VirD4 E4O04_03190 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03190 IPR001482 Type II/IV secretion system protein E4O04_03215 IPR003593 AAA+ ATPase domain E4O04_03215 IPR004346 CagE, TrbE, VirB component of type IV transporter system E4O04_03215 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain E4O04_03215 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03240 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI E4O04_03240 IPR042217 Type IV secretion system, VirB10/TrbI E4O04_03290 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03290 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_03290 IPR001650 Helicase, C-terminal E4O04_03290 IPR038718 SNF2-like, N-terminal domain superfamily E4O04_03290 IPR000330 SNF2-related, N-terminal domain E4O04_03290 IPR007527 Zinc finger, SWIM-type E4O04_03305 IPR010994 RuvA domain 2-like E4O04_03305 IPR025657 RadC-like JAB domain E4O04_03305 IPR020891 Uncharacterised protein family UPF0758, conserved site E4O04_03305 IPR001405 Uncharacterised protein family UPF0758 E4O04_03305 IPR037518 MPN domain E4O04_03345 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site E4O04_03345 IPR001091 Restriction/modification DNA-methylase E4O04_03345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_03345 IPR002941 DNA methylase N-4/N-6 E4O04_03350 IPR012340 Nucleic acid-binding, OB-fold E4O04_03350 IPR000424 Primosome PriB/single-strand DNA-binding E4O04_03350 IPR011344 Single-stranded DNA-binding protein E4O04_03405 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_03405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_03405 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II E4O04_03405 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily E4O04_03405 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain E4O04_03405 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E4O04_03405 IPR011895 Pyruvate-flavodoxin oxidoreductase E4O04_03405 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain E4O04_03405 IPR029061 Thiamin diphosphate-binding fold E4O04_03405 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E4O04_03405 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain E4O04_03405 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal E4O04_03415 IPR011990 Tetratricopeptide-like helical domain superfamily E4O04_03430 IPR033828 CTP synthase GATase domain E4O04_03430 IPR029062 Class I glutamine amidotransferase-like E4O04_03430 IPR004468 CTP synthase E4O04_03430 IPR017456 CTP synthase, N-terminal E4O04_03430 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03430 IPR017926 Glutamine amidotransferase E4O04_03435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_03435 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_03435 IPR005860 L-threonine-O-3-phosphate decarboxylase E4O04_03435 IPR004839 Aminotransferase, class I/classII E4O04_03435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_03440 IPR020006 Flagellar biosynthesis protein FlhF E4O04_03440 IPR003593 AAA+ ATPase domain E4O04_03440 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain E4O04_03440 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03445 IPR025501 ATP binding protein MinD E4O04_03445 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 E4O04_03445 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03455 IPR014284 RNA polymerase sigma-70 like domain E4O04_03455 IPR000943 RNA polymerase sigma-70 E4O04_03455 IPR007627 RNA polymerase sigma-70 region 2 E4O04_03455 IPR007624 RNA polymerase sigma-70 region 3 E4O04_03455 IPR007630 RNA polymerase sigma-70 region 4 E4O04_03455 IPR012845 RNA polymerase sigma factor, FliA/WhiG E4O04_03455 IPR013324 RNA polymerase sigma factor, region 3/4-like E4O04_03455 IPR013325 RNA polymerase sigma factor, region 2 E4O04_03485 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E4O04_03485 IPR004450 Threonine synthase-like E4O04_03485 IPR037158 Threonine synthase, N-terminal domain superfamily E4O04_03485 IPR029144 Threonine synthase, N-terminal E4O04_03485 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site E4O04_03485 IPR001926 Pyridoxal-phosphate dependent enzyme E4O04_03515 IPR000715 Glycosyl transferase, family 4 E4O04_03515 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site E4O04_03520 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase E4O04_03520 IPR000462 CDP-alcohol phosphatidyltransferase E4O04_03525 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site E4O04_03525 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_03525 IPR039429 Serine hydroxymethyltransferase-like domain E4O04_03525 IPR001085 Serine hydroxymethyltransferase E4O04_03525 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_03540 IPR000644 CBS domain E4O04_03540 IPR001093 IMP dehydrogenase/GMP reductase E4O04_03540 IPR013785 Aldolase-type TIM barrel E4O04_03540 IPR015875 IMP dehydrogenase / GMP reductase, conserved site E4O04_03540 IPR005990 Inosine-5'-monophosphate dehydrogenase E4O04_03545 IPR002300 Aminoacyl-tRNA synthetase, class Ia E4O04_03545 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain E4O04_03545 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E4O04_03545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_03545 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding E4O04_03545 IPR023586 Isoleucine-tRNA ligase, type 2 E4O04_03545 IPR002301 Isoleucine-tRNA ligase E4O04_03545 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain E4O04_03565 IPR011006 CheY-like superfamily E4O04_03565 IPR021800 Domain of unknown function DUF3369 E4O04_03565 IPR003607 HD/PDEase domain E4O04_03565 IPR037522 HD-GYP domain E4O04_03565 IPR001789 Signal transduction response regulator, receiver domain E4O04_03570 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain E4O04_03570 IPR017929 CobB/CobQ glutamine amidotransferase E4O04_03570 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03570 IPR029062 Class I glutamine amidotransferase-like E4O04_03570 IPR011698 CobB/CobQ-like glutamine amidotransferase E4O04_03570 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA E4O04_03575 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site E4O04_03575 IPR000878 Tetrapyrrole methylase E4O04_03575 IPR035996 Tetrapyrrole methylase superfamily E4O04_03575 IPR014777 Tetrapyrrole methylase, subdomain 1 E4O04_03575 IPR014776 Tetrapyrrole methylase, subdomain 2 E4O04_03575 IPR012382 Precorrin-2 C(20)-methyltransferase E4O04_03575 IPR006364 Precorrin-2 C(20)-methyltransferase domain E4O04_03580 IPR010388 Anaerobic cobalt chelatase E4O04_03590 IPR011663 UbiC transcription regulator-associated E4O04_03590 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily E4O04_03590 IPR036390 Winged helix DNA-binding domain superfamily E4O04_03590 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_03590 IPR000524 Transcription regulator HTH, GntR E4O04_03595 IPR003593 AAA+ ATPase domain E4O04_03595 IPR003439 ABC transporter-like E4O04_03595 IPR017871 ABC transporter, conserved site E4O04_03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03605 IPR005892 Glycine betaine transport ATP-binding subunit E4O04_03605 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03605 IPR017871 ABC transporter, conserved site E4O04_03605 IPR003439 ABC transporter-like E4O04_03605 IPR000644 CBS domain E4O04_03605 IPR003593 AAA+ ATPase domain E4O04_03615 IPR007419 BFD-like [2Fe-2S]-binding domain E4O04_03615 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily E4O04_03615 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_03615 IPR023753 FAD/NAD(P)-binding domain E4O04_03615 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B E4O04_03620 IPR006076 FAD dependent oxidoreductase E4O04_03620 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_03620 IPR008471 MnmC-like methyltransferase E4O04_03620 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC E4O04_03620 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal E4O04_03630 IPR010093 SinI-like, DNA-binding domain E4O04_03630 IPR041657 Helix-turn-helix domain, group 17 E4O04_03630 IPR040198 Fido domain-containing protein E4O04_03630 IPR036597 Fido-like domain superfamily E4O04_03630 IPR003812 Fido domain E4O04_03640 IPR013647 Oligopeptidase F, N-terminal domain E4O04_03640 IPR042088 Oligoendopeptidase F, C-terminal domain E4O04_03640 IPR001567 Peptidase M3A/M3B catalytic domain E4O04_03640 IPR004438 Peptidase M3B, oligoendopeptidase F E4O04_03660 IPR030390 RNA methyltransferase TrmA, active site E4O04_03660 IPR012340 Nucleic acid-binding, OB-fold E4O04_03660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_03660 IPR010280 (Uracil-5)-methyltransferase family E4O04_03665 IPR003141 Polymerase/histidinol phosphatase, N-terminal E4O04_03665 IPR004013 PHP domain E4O04_03665 IPR016195 Polymerase/histidinol phosphatase-like E4O04_03675 IPR036390 Winged helix DNA-binding domain superfamily E4O04_03675 IPR018488 Cyclic nucleotide-binding, conserved site E4O04_03675 IPR000595 Cyclic nucleotide-binding domain E4O04_03675 IPR012318 Crp-type HTH domain E4O04_03675 IPR018490 Cyclic nucleotide-binding-like E4O04_03675 IPR014710 RmlC-like jelly roll fold E4O04_03675 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_03680 IPR001872 Peptidase A8, signal peptidase II E4O04_03685 IPR042159 Flavin-trafficking protein ApbE E4O04_03685 IPR003374 ApbE-like superfamily E4O04_03685 IPR024932 Flavin transferase ApbE E4O04_03705 IPR007197 Radical SAM E4O04_03705 IPR013848 Methylthiotransferase, N-terminal E4O04_03705 IPR020612 Methylthiotransferase, conserved site E4O04_03705 IPR005839 Methylthiotransferase E4O04_03705 IPR006638 Elp3/MiaB/NifB E4O04_03705 IPR005840 Ribosomal protein S12 methylthiotransferase RimO E4O04_03705 IPR041582 RimO, TRAM domain E4O04_03705 IPR038135 Methylthiotransferase, N-terminal domain superfamily E4O04_03705 IPR023404 Radical SAM, alpha/beta horseshoe E4O04_03720 IPR003660 HAMP domain E4O04_03720 IPR029151 Periplasmic sensor-like domain superfamily E4O04_03720 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_03720 IPR033479 Double Cache domain 1 E4O04_03725 IPR029151 Periplasmic sensor-like domain superfamily E4O04_03725 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_03725 IPR003660 HAMP domain E4O04_03725 IPR033479 Double Cache domain 1 E4O04_03735 IPR035085 Urocanase, Rossmann-like domain E4O04_03735 IPR023637 Urocanase E4O04_03735 IPR035401 Urocanase, C-terminal domain E4O04_03735 IPR036190 Urocanase superfamily E4O04_03735 IPR038364 Urocanase, central domain superfamily E4O04_03735 IPR035400 Urocanase, N-terminal domain E4O04_03735 IPR023636 Urocanase conserved site E4O04_03740 IPR002765 Uncharacterised protein family UPF0145 E4O04_03740 IPR035439 UPF0145 domain superfamily E4O04_03745 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain E4O04_03750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_03750 IPR004498 Ribosomal protein L11 methyltransferase E4O04_03755 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03755 IPR041682 AAA domain, group 14 E4O04_03755 IPR025420 Domain of unknown function DUF4143 E4O04_03770 IPR007696 DNA mismatch repair protein MutS, core E4O04_03770 IPR007860 DNA mismatch repair protein MutS, connector domain E4O04_03770 IPR005748 DNA mismatch repair protein MutS E4O04_03770 IPR007695 DNA mismatch repair protein MutS-like, N-terminal E4O04_03770 IPR017261 DNA mismatch repair protein MutS/MSH E4O04_03770 IPR000432 DNA mismatch repair protein MutS, C-terminal E4O04_03770 IPR007861 DNA mismatch repair protein MutS, clamp E4O04_03770 IPR016151 DNA mismatch repair protein MutS, N-terminal E4O04_03770 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03770 IPR036678 MutS, connector domain superfamily E4O04_03770 IPR036187 DNA mismatch repair protein MutS, core domain superfamily E4O04_03780 IPR034746 POTRA domain E4O04_03780 IPR010827 POTRA domain, BamA/TamA-like E4O04_03780 IPR039910 Surface antigen D15-like E4O04_03780 IPR023707 Outer membrane protein assembly factor BamA E4O04_03780 IPR000184 Bacterial surface antigen (D15) E4O04_03790 IPR018094 Thymidylate kinase E4O04_03790 IPR018095 Thymidylate kinase, conserved site E4O04_03790 IPR039430 Thymidylate kinase-like domain E4O04_03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03800 IPR013785 Aldolase-type TIM barrel E4O04_03800 IPR026019 Ribulose-phosphate 3-epimerase E4O04_03800 IPR011060 Ribulose-phosphate binding barrel E4O04_03800 IPR000056 Ribulose-phosphate 3-epimerase-like E4O04_03820 IPR009057 Homeobox-like domain superfamily E4O04_03820 IPR003593 AAA+ ATPase domain E4O04_03820 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E4O04_03820 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03820 IPR002078 RNA polymerase sigma factor 54 interaction domain E4O04_03820 IPR002197 DNA binding HTH domain, Fis-type E4O04_03820 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E4O04_03820 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily E4O04_03820 IPR025944 Sigma-54 interaction domain, conserved site E4O04_03820 IPR004096 4-vinyl reductase, 4VR E4O04_03820 IPR010523 Activator of aromatic catabolism E4O04_03825 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily E4O04_03825 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain E4O04_03835 IPR023358 Peptidase M18, domain 2 E4O04_03835 IPR001948 Peptidase M18 E4O04_03835 IPR022983 M18 family aminopeptidase 1, putative E4O04_03850 IPR001270 ClpA/B family E4O04_03850 IPR012763 DNA polymerase III, subunit gamma/ tau E4O04_03850 IPR022754 DNA polymerase III, gamma subunit, domain III E4O04_03850 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal E4O04_03850 IPR003593 AAA+ ATPase domain E4O04_03850 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03855 IPR004090 Chemotaxis methyl-accepting receptor E4O04_03855 IPR003660 HAMP domain E4O04_03855 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain E4O04_03855 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_03855 IPR000727 Target SNARE coiled-coil homology domain E4O04_03860 IPR005322 Peptidase C69, dipeptidase A E4O04_03875 IPR000160 GGDEF domain E4O04_03875 IPR011006 CheY-like superfamily E4O04_03875 IPR029787 Nucleotide cyclase E4O04_03875 IPR001789 Signal transduction response regulator, receiver domain E4O04_03880 IPR039435 Diguanylate cyclase DosC, globin sensor domain E4O04_03880 IPR000160 GGDEF domain E4O04_03880 IPR029787 Nucleotide cyclase E4O04_03880 IPR012292 Globin/Protoglobin E4O04_03880 IPR009050 Globin-like superfamily E4O04_03885 IPR033454 RecG, wedge domain E4O04_03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03885 IPR012340 Nucleic acid-binding, OB-fold E4O04_03885 IPR001650 Helicase, C-terminal E4O04_03885 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_03885 IPR011545 DEAD/DEAH box helicase domain E4O04_03885 IPR004609 ATP-dependent DNA helicase RecG E4O04_03905 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_03905 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E4O04_03905 IPR006145 Pseudouridine synthase, RsuA/RluA E4O04_03905 IPR036986 RNA-binding S4 domain superfamily E4O04_03905 IPR006225 Pseudouridine synthase, RluC/RluD E4O04_03905 IPR002942 RNA-binding S4 domain E4O04_03915 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_03915 IPR006073 GTP binding domain E4O04_03915 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC E4O04_03915 IPR030393 EngB-type guanine nucleotide-binding (G) domain E4O04_03920 IPR035482 Phosphoglucose isomerase, SIS domain 2 E4O04_03920 IPR035476 Phosphoglucose isomerase, SIS domain 1 E4O04_03920 IPR018189 Phosphoglucose isomerase, conserved site E4O04_03920 IPR023096 Phosphoglucose isomerase, C-terminal E4O04_03920 IPR001672 Phosphoglucose isomerase (PGI) E4O04_03930 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase E4O04_03930 IPR000462 CDP-alcohol phosphatidyltransferase E4O04_03935 IPR003173 Transcriptional coactivator p15 (PC4) E4O04_03935 IPR017154 Uncharacterised conserved protein UCP037246 E4O04_03940 IPR036397 Ribonuclease H superfamily E4O04_03940 IPR022892 Ribonuclease HI E4O04_03940 IPR012337 Ribonuclease H-like superfamily E4O04_03940 IPR002156 Ribonuclease H domain E4O04_03945 IPR013785 Aldolase-type TIM barrel E4O04_03945 IPR006218 DAHP synthetase I/KDSA E4O04_03945 IPR006219 DHAP synthase, class 1 E4O04_03950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_03950 IPR020536 Thil, AANH domain E4O04_03950 IPR004114 THUMP domain E4O04_03950 IPR003720 tRNA sulfurtransferase ThiI E4O04_03970 IPR009614 Toxin YoeB E4O04_03970 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily E4O04_03980 IPR037294 ABC transporter, BtuC-like E4O04_03980 IPR001626 ABC transporter, TroCD-like E4O04_03985 IPR003593 AAA+ ATPase domain E4O04_03985 IPR003439 ABC transporter-like E4O04_03985 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04000 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04000 IPR017871 ABC transporter, conserved site E4O04_04000 IPR003439 ABC transporter-like E4O04_04000 IPR003593 AAA+ ATPase domain E4O04_04000 IPR011527 ABC transporter type 1, transmembrane domain E4O04_04000 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_04005 IPR003593 AAA+ ATPase domain E4O04_04005 IPR011527 ABC transporter type 1, transmembrane domain E4O04_04005 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_04005 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC E4O04_04005 IPR003439 ABC transporter-like E4O04_04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04010 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_04010 IPR018631 AAA-ATPase-like domain E4O04_04015 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC E4O04_04015 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily E4O04_04020 IPR016154 Heat shock protein Hsp33, C-terminal E4O04_04020 IPR016153 Heat shock protein Hsp33, N-terminal E4O04_04020 IPR000397 Heat shock protein Hsp33 E4O04_04025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_04025 IPR042078 Lysine tRNA ligase, stem contact fold domain E4O04_04025 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding E4O04_04025 IPR002904 Lysine-tRNA ligase E4O04_04025 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E4O04_04025 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 E4O04_04025 IPR023386 Lysine-tRNA ligase, insertion domain superfamily E4O04_04040 IPR019264 Domain of unknown function DUF2179 E4O04_04040 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal E4O04_04040 IPR003740 Uncharacterised membrane protein YitT E4O04_04080 IPR015795 Pyruvate kinase, C-terminal E4O04_04080 IPR015806 Pyruvate kinase, insert domain superfamily E4O04_04080 IPR015793 Pyruvate kinase, barrel E4O04_04080 IPR036918 Pyruvate kinase, C-terminal domain superfamily E4O04_04080 IPR040442 Pyruvate kinase-like domain superfamily E4O04_04080 IPR008279 PEP-utilising enzyme, mobile domain E4O04_04080 IPR036637 Phosphohistidine domain superfamily E4O04_04080 IPR011037 Pyruvate kinase-like, insert domain superfamily E4O04_04080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E4O04_04080 IPR001697 Pyruvate kinase E4O04_04085 IPR011257 DNA glycosylase E4O04_04085 IPR004036 Endonuclease III-like, conserved site-2 E4O04_04085 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif E4O04_04085 IPR004035 Endonuclease III, iron-sulphur binding site E4O04_04085 IPR003265 HhH-GPD domain E4O04_04085 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal E4O04_04085 IPR005759 Endonuclease III E4O04_04110 IPR007197 Radical SAM E4O04_04110 IPR040086 Protein MJ0683-like E4O04_04110 IPR006638 Elp3/MiaB/NifB E4O04_04110 IPR013785 Aldolase-type TIM barrel E4O04_04140 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like E4O04_04145 IPR003439 ABC transporter-like E4O04_04145 IPR017871 ABC transporter, conserved site E4O04_04145 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_04145 IPR039421 Type I protein exporter E4O04_04145 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04145 IPR003593 AAA+ ATPase domain E4O04_04145 IPR011527 ABC transporter type 1, transmembrane domain E4O04_04150 IPR017871 ABC transporter, conserved site E4O04_04150 IPR003593 AAA+ ATPase domain E4O04_04150 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_04150 IPR011527 ABC transporter type 1, transmembrane domain E4O04_04150 IPR003439 ABC transporter-like E4O04_04150 IPR039421 Type I protein exporter E4O04_04150 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04150 IPR011917 ABC transporter, lipid A export, MsbA E4O04_04170 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_04170 IPR018631 AAA-ATPase-like domain E4O04_04175 IPR014774 KaiC-like domain E4O04_04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04175 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain E4O04_04175 IPR003593 AAA+ ATPase domain E4O04_04175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_04175 IPR041166 LapB, rubredoxin metal binding domain E4O04_04175 IPR004504 DNA repair protein RadA E4O04_04175 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_04200 IPR016187 C-type lectin fold E4O04_04200 IPR005532 Sulfatase-modifying factor enzyme E4O04_04200 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_04210 IPR003682 rRNA small subunit methyltransferase G E4O04_04210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_04215 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E4O04_04215 IPR016161 Aldehyde/histidinol dehydrogenase E4O04_04215 IPR016160 Aldehyde dehydrogenase, cysteine active site E4O04_04215 IPR015590 Aldehyde dehydrogenase domain E4O04_04215 IPR016162 Aldehyde dehydrogenase, N-terminal E4O04_04215 IPR016163 Aldehyde dehydrogenase, C-terminal E4O04_04215 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent E4O04_04235 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD E4O04_04235 IPR000905 Gcp-like domain E4O04_04235 IPR017861 Kae1/TsaD family E4O04_04250 IPR003660 HAMP domain E4O04_04250 IPR001789 Signal transduction response regulator, receiver domain E4O04_04250 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E4O04_04250 IPR036641 HPT domain superfamily E4O04_04250 IPR019247 Histidine kinase BarA, N-terminal E4O04_04250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E4O04_04250 IPR005467 Histidine kinase domain E4O04_04250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_04250 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_04250 IPR011006 CheY-like superfamily E4O04_04250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E4O04_04250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E4O04_04255 IPR011006 CheY-like superfamily E4O04_04255 IPR001867 OmpR/PhoB-type DNA-binding domain E4O04_04255 IPR001789 Signal transduction response regulator, receiver domain E4O04_04255 IPR039420 Transcriptional regulatory protein WalR-like E4O04_04255 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_04265 IPR013216 Methyltransferase type 11 E4O04_04265 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC E4O04_04265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_04275 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_04275 IPR003660 HAMP domain E4O04_04275 IPR033479 Double Cache domain 1 E4O04_04275 IPR029151 Periplasmic sensor-like domain superfamily E4O04_04285 IPR036895 Uracil-DNA glycosylase-like domain superfamily E4O04_04285 IPR005273 Uracil-DNA glycosylase family 4 E4O04_04285 IPR005122 Uracil-DNA glycosylase-like E4O04_04290 IPR011545 DEAD/DEAH box helicase domain E4O04_04290 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_04290 IPR001650 Helicase, C-terminal E4O04_04290 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04290 IPR005259 Primosomal protein N' E4O04_04290 IPR041222 Primosomal protein N', 3' DNA-binding domain E4O04_04290 IPR041236 Primosomal protein N, C-terminal domain E4O04_04290 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain E4O04_04290 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily E4O04_04325 IPR000352 Peptide chain release factor class I E4O04_04325 IPR005139 Peptide chain release factor E4O04_04325 IPR004373 Peptide chain release factor 1 E4O04_04330 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_04330 IPR004556 Methyltransferase HemK-like E4O04_04330 IPR040758 Release factor glutamine methyltransferase, N-terminal domain E4O04_04330 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific E4O04_04330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_04330 IPR007848 Methyltransferase small domain E4O04_04340 IPR018631 AAA-ATPase-like domain E4O04_04340 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_04365 IPR033479 Double Cache domain 1 E4O04_04365 IPR000727 Target SNARE coiled-coil homology domain E4O04_04365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_04365 IPR029151 Periplasmic sensor-like domain superfamily E4O04_04365 IPR003660 HAMP domain E4O04_04370 IPR023367 Peptidase M42, domain 2 E4O04_04370 IPR008007 Peptidase M42 E4O04_04375 IPR003148 Regulator of K+ conductance, N-terminal E4O04_04375 IPR036291 NAD(P)-binding domain superfamily E4O04_04375 IPR013099 Potassium channel domain E4O04_04415 IPR003964 Carbamate kinase E4O04_04415 IPR036393 Acetylglutamate kinase-like superfamily E4O04_04415 IPR001048 Aspartate/glutamate/uridylate kinase E4O04_04420 IPR002528 Multi antimicrobial extrusion protein E4O04_04425 IPR001911 Ribosomal protein S21 E4O04_04425 IPR018278 Ribosomal protein S21, conserved site E4O04_04425 IPR038380 Ribosomal protein S21 superfamily E4O04_04435 IPR002133 S-adenosylmethionine synthetase E4O04_04435 IPR022636 S-adenosylmethionine synthetase superfamily E4O04_04435 IPR022628 S-adenosylmethionine synthetase, N-terminal E4O04_04435 IPR022631 S-adenosylmethionine synthetase, conserved site E4O04_04435 IPR022630 S-adenosylmethionine synthetase, C-terminal E4O04_04435 IPR022629 S-adenosylmethionine synthetase, central domain E4O04_04450 IPR001455 TusA-like domain E4O04_04450 IPR036868 TusA-like domain superfamily E4O04_04470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_04470 IPR000192 Aminotransferase class V domain E4O04_04470 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E4O04_04470 IPR010970 Cysteine desulfurase, SufS E4O04_04470 IPR016454 Cysteine desulfurase E4O04_04470 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_04470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_04475 IPR017871 ABC transporter, conserved site E4O04_04475 IPR003439 ABC transporter-like E4O04_04475 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_04475 IPR011527 ABC transporter type 1, transmembrane domain E4O04_04475 IPR039421 Type I protein exporter E4O04_04475 IPR003593 AAA+ ATPase domain E4O04_04475 IPR011917 ABC transporter, lipid A export, MsbA E4O04_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04480 IPR013113 FAD-binding 9, siderophore-interacting E4O04_04480 IPR017927 FAD-binding domain, ferredoxin reductase-type E4O04_04480 IPR007037 Siderophore-interacting protein, C-terminal domain E4O04_04480 IPR017871 ABC transporter, conserved site E4O04_04480 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E4O04_04480 IPR003439 ABC transporter-like E4O04_04480 IPR003593 AAA+ ATPase domain E4O04_04480 IPR017938 Riboflavin synthase-like beta-barrel E4O04_04480 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_04480 IPR011527 ABC transporter type 1, transmembrane domain E4O04_04480 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04485 IPR001647 DNA-binding HTH domain, TetR-type E4O04_04485 IPR009057 Homeobox-like domain superfamily E4O04_04485 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E4O04_04500 IPR003439 ABC transporter-like E4O04_04500 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04500 IPR003593 AAA+ ATPase domain E4O04_04505 IPR013572 Transcription regulator MAATS, C-terminal E4O04_04505 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E4O04_04505 IPR001647 DNA-binding HTH domain, TetR-type E4O04_04505 IPR009057 Homeobox-like domain superfamily E4O04_04505 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E4O04_04515 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_04515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_04515 IPR011639 Restriction modification methylase Eco57I E4O04_04525 IPR018631 AAA-ATPase-like domain E4O04_04525 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_04530 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA E4O04_04530 IPR042119 QueA, domain 2 E4O04_04530 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily E4O04_04530 IPR042118 QueA, domain 1 E4O04_04535 IPR002110 Ankyrin repeat E4O04_04535 IPR020683 Ankyrin repeat-containing domain E4O04_04535 IPR036770 Ankyrin repeat-containing domain superfamily E4O04_04540 IPR002733 AMMECR1 domain E4O04_04540 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B E4O04_04540 IPR023472 Uncharacterised protein family MJ0810 E4O04_04540 IPR027485 AMMECR1, N-terminal E4O04_04540 IPR023473 AMMECR1 E4O04_04540 IPR027623 AmmeMemoRadiSam system protein A E4O04_04540 IPR036071 AMMECR1 domain superfamily E4O04_04545 IPR018631 AAA-ATPase-like domain E4O04_04545 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_04555 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04555 IPR031322 Shikimate kinase/gluconokinase E4O04_04555 IPR000623 Shikimate kinase/Threonine synthase-like 1 E4O04_04560 IPR036291 NAD(P)-binding domain superfamily E4O04_04560 IPR015884 Malic enzyme, conserved site E4O04_04560 IPR012301 Malic enzyme, N-terminal domain E4O04_04560 IPR037062 Malic enzyme, N-terminal domain superfamily E4O04_04560 IPR012302 Malic enzyme, NAD-binding E4O04_04560 IPR001891 Malic oxidoreductase E4O04_04565 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_04565 IPR020575 Heat shock protein Hsp90, N-terminal E4O04_04565 IPR001404 Heat shock protein Hsp90 family E4O04_04565 IPR019805 Heat shock protein Hsp90, conserved site E4O04_04565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_04565 IPR037196 HSP90, C-terminal domain E4O04_04615 IPR008490 Transposase InsH, N-terminal E4O04_04615 IPR002559 Transposase, IS4-like E4O04_04625 IPR001162 UvrC family homology region E4O04_04625 IPR004791 UvrABC system, subunit C E4O04_04625 IPR038476 UvrC homology region 2 superfamily E4O04_04625 IPR000305 GIY-YIG endonuclease E4O04_04625 IPR035901 GIY-YIG endonuclease superfamily E4O04_04625 IPR010994 RuvA domain 2-like E4O04_04625 IPR001943 UVR domain E4O04_04625 IPR036876 UVR domain superfamily E4O04_04630 IPR018631 AAA-ATPase-like domain E4O04_04630 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_04635 IPR004534 L-seryl-tRNA(Sec) selenium transferase E4O04_04635 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain E4O04_04635 IPR018319 L-seryl-tRNA selenium transferase-like E4O04_04635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_04635 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_04640 IPR003439 ABC transporter-like E4O04_04640 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_04640 IPR039421 Type I protein exporter E4O04_04640 IPR005074 Peptidase C39, bacteriocin processing E4O04_04640 IPR005897 Peptidase C39, ABC-type bacteriocin transporter E4O04_04640 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04640 IPR011527 ABC transporter type 1, transmembrane domain E4O04_04640 IPR003593 AAA+ ATPase domain E4O04_04640 IPR017871 ABC transporter, conserved site E4O04_04660 IPR011332 Zinc-binding ribosomal protein E4O04_04660 IPR018264 Ribosomal protein L33, conserved site E4O04_04660 IPR001705 Ribosomal protein L33 E4O04_04660 IPR038584 Ribosomal protein L33 superfamily E4O04_04670 IPR005807 SecE subunit of protein translocation complex, bacterial-like E4O04_04670 IPR038379 SecE superfamily E4O04_04670 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit E4O04_04675 IPR014722 Ribosomal protein L2, domain 2 E4O04_04675 IPR008991 Translation protein SH3-like domain superfamily E4O04_04675 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site E4O04_04675 IPR001062 Transcription antitermination protein, NusG E4O04_04675 IPR036735 NusG, N-terminal domain superfamily E4O04_04675 IPR006645 NusG, N-terminal E4O04_04675 IPR005824 KOW E4O04_04680 IPR020785 Ribosomal protein L11, conserved site E4O04_04680 IPR020784 Ribosomal protein L11, N-terminal E4O04_04680 IPR036769 Ribosomal protein L11, C-terminal domain superfamily E4O04_04680 IPR006519 Ribosomal protein L11, bacterial-type E4O04_04680 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily E4O04_04680 IPR000911 Ribosomal protein L11/L12 E4O04_04680 IPR020783 Ribosomal protein L11, C-terminal E4O04_04685 IPR023673 Ribosomal protein L1, conserved site E4O04_04685 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein E4O04_04685 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich E4O04_04685 IPR002143 Ribosomal protein L1 E4O04_04685 IPR005878 Ribosomal protein L1, bacterial-type E4O04_04685 IPR023674 Ribosomal protein L1-like E4O04_04690 IPR022973 Ribosomal protein L10 E4O04_04690 IPR001790 Ribosomal protein L10P E4O04_04695 IPR008932 Ribosomal protein L7/L12, oligomerisation E4O04_04695 IPR000206 Ribosomal protein L7/L12 E4O04_04695 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like E4O04_04695 IPR013823 Ribosomal protein L7/L12, C-terminal E4O04_04695 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily E4O04_04700 IPR007645 RNA polymerase Rpb2, domain 3 E4O04_04700 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain E4O04_04700 IPR014724 RNA polymerase Rpb2, OB-fold E4O04_04700 IPR007641 RNA polymerase Rpb2, domain 7 E4O04_04700 IPR037034 RNA polymerase Rpb2, domain 2 superfamily E4O04_04700 IPR007644 RNA polymerase, beta subunit, protrusion E4O04_04700 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type E4O04_04700 IPR007642 RNA polymerase Rpb2, domain 2 E4O04_04700 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily E4O04_04700 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily E4O04_04700 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain E4O04_04700 IPR015712 DNA-directed RNA polymerase, subunit 2 E4O04_04705 IPR038120 RNA polymerase Rpb1, funnel domain superfamily E4O04_04705 IPR007066 RNA polymerase Rpb1, domain 3 E4O04_04705 IPR007081 RNA polymerase Rpb1, domain 5 E4O04_04705 IPR007083 RNA polymerase Rpb1, domain 4 E4O04_04705 IPR012754 DNA-directed RNA polymerase, subunit beta-prime E4O04_04705 IPR000722 RNA polymerase, alpha subunit E4O04_04705 IPR006592 RNA polymerase, N-terminal E4O04_04705 IPR007080 RNA polymerase Rpb1, domain 1 E4O04_04705 IPR042102 RNA polymerase Rpb1, domain 3 superfamily E4O04_04735 IPR035090 Phosphorylase pyridoxal-phosphate attachment site E4O04_04735 IPR011833 Glycogen/starch/alpha-glucan phosphorylase E4O04_04735 IPR000811 Glycosyl transferase, family 35 E4O04_04755 IPR004839 Aminotransferase, class I/classII E4O04_04755 IPR027619 Putative C-S lyase E4O04_04755 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_04755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_04755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_04770 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_04770 IPR018631 AAA-ATPase-like domain E4O04_04780 IPR035584 Amidophosphoribosyltransferase, N-terminal E4O04_04780 IPR005854 Amidophosphoribosyltransferase E4O04_04780 IPR000836 Phosphoribosyltransferase domain E4O04_04780 IPR029055 Nucleophile aminohydrolases, N-terminal E4O04_04780 IPR029057 Phosphoribosyltransferase-like E4O04_04780 IPR017932 Glutamine amidotransferase type 2 domain E4O04_04805 IPR000394 RNA polymerase sigma factor 54 E4O04_04805 IPR007046 RNA polymerase sigma factor 54, core-binding domain E4O04_04805 IPR007634 RNA polymerase sigma factor 54, DNA-binding E4O04_04805 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily E4O04_04810 IPR001279 Metallo-beta-lactamase E4O04_04810 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E4O04_04820 IPR001509 NAD-dependent epimerase/dehydratase E4O04_04820 IPR036291 NAD(P)-binding domain superfamily E4O04_04830 IPR000271 Ribosomal protein L34 E4O04_04835 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_04835 IPR020539 Ribonuclease P, conserved site E4O04_04835 IPR000100 Ribonuclease P E4O04_04835 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_04840 IPR002696 Putative membrane protein insertion efficiency factor E4O04_04845 IPR038210 Membrane insertase YidC, periplasmic domain E4O04_04845 IPR038221 YidC, periplasmic domain superfamily E4O04_04845 IPR028053 Membrane insertase YidC, N-terminal E4O04_04845 IPR028055 Membrane insertase YidC/Oxa1, C-terminal E4O04_04845 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 E4O04_04845 IPR019998 Membrane insertase YidC E4O04_04850 IPR034079 Jag, R3H domain E4O04_04850 IPR039247 Jag protein E4O04_04850 IPR038008 Jag, KH domain E4O04_04850 IPR032782 Jag, N-terminal E4O04_04850 IPR038247 Jag, N-terminal domain superfamily E4O04_04850 IPR015946 K homology domain-like, alpha/beta E4O04_04850 IPR001374 R3H domain E4O04_04850 IPR036867 R3H domain superfamily E4O04_04860 IPR029000 Cyclophilin-like domain superfamily E4O04_04860 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site E4O04_04860 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain E4O04_04870 IPR004485 Cobalamin biosynthesis CobD/CbiB E4O04_04875 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA E4O04_04875 IPR029045 ClpP/crotonase-like domain superfamily E4O04_04875 IPR001907 ATP-dependent Clp protease proteolytic subunit E4O04_04875 IPR033135 ClpP, histidine active site E4O04_04880 IPR002559 Transposase, IS4-like E4O04_04880 IPR032806 H repeat-associated protein, N-terminal E4O04_04890 IPR020809 Enolase, conserved site E4O04_04890 IPR020811 Enolase, N-terminal E4O04_04890 IPR029017 Enolase-like, N-terminal E4O04_04890 IPR000941 Enolase E4O04_04890 IPR020810 Enolase, C-terminal TIM barrel domain E4O04_04890 IPR036849 Enolase-like, C-terminal domain superfamily E4O04_04945 IPR028082 Periplasmic binding protein-like I E4O04_04945 IPR003760 ABC transporter substrate-binding protein PnrA-like E4O04_04950 IPR003439 ABC transporter-like E4O04_04950 IPR017871 ABC transporter, conserved site E4O04_04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_04955 IPR001851 ABC transporter, permease E4O04_04960 IPR001851 ABC transporter, permease E4O04_04970 IPR007156 LemA E4O04_04970 IPR023353 LemA-like domain superfamily E4O04_04975 IPR030395 Glycerophosphodiester phosphodiesterase domain E4O04_04975 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily E4O04_04985 IPR038690 NusG, domain 2 superfamily E4O04_04985 IPR024045 NusG, domain 2 E4O04_04990 IPR035919 EAL domain superfamily E4O04_04990 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain E4O04_04990 IPR001633 EAL domain E4O04_04995 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal E4O04_04995 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily E4O04_04995 IPR013785 Aldolase-type TIM barrel E4O04_04995 IPR013132 N-acetylneuraminic acid synthase, N-terminal E4O04_04995 IPR013974 SAF domain E4O04_05010 IPR036775 DNA polymerase, Y-family, little finger domain superfamily E4O04_05010 IPR017961 DNA polymerase, Y-family, little finger domain E4O04_05010 IPR022880 DNA polymerase IV E4O04_05010 IPR001126 UmuC domain E4O04_05010 IPR024728 DNA polymerase type-Y, HhH motif E4O04_05020 IPR005235 Metallophosphoesterase, YmdB-like E4O04_05020 IPR029052 Metallo-dependent phosphatase-like E4O04_05035 IPR001059 Translation elongation factor P/YeiP, central E4O04_05035 IPR013185 Translation elongation factor, KOW-like E4O04_05035 IPR020599 Translation elongation factor P/YeiP E4O04_05035 IPR014722 Ribosomal protein L2, domain 2 E4O04_05035 IPR012340 Nucleic acid-binding, OB-fold E4O04_05035 IPR015365 Elongation factor P, C-terminal E4O04_05035 IPR011768 Translation elongation factor P E4O04_05035 IPR008991 Translation protein SH3-like domain superfamily E4O04_05040 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E4O04_05040 IPR035684 Arginyl-tRNA synthetase, catalytic core domain E4O04_05040 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily E4O04_05040 IPR005148 Arginyl tRNA synthetase N-terminal domain E4O04_05040 IPR008909 DALR anticodon binding E4O04_05040 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E4O04_05040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_05040 IPR001278 Arginine-tRNA ligase E4O04_05045 IPR005222 Competence protein ComF E4O04_05045 IPR000836 Phosphoribosyltransferase domain E4O04_05045 IPR029057 Phosphoribosyltransferase-like E4O04_05050 IPR037518 MPN domain E4O04_05050 IPR025657 RadC-like JAB domain E4O04_05050 IPR010994 RuvA domain 2-like E4O04_05050 IPR001405 Uncharacterised protein family UPF0758 E4O04_05050 IPR020891 Uncharacterised protein family UPF0758, conserved site E4O04_05055 IPR012338 Beta-lactamase/transpeptidase-like E4O04_05055 IPR015956 Penicillin-binding protein, C-terminal domain superfamily E4O04_05055 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A E4O04_05055 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal E4O04_05055 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily E4O04_05055 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal E4O04_05060 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type E4O04_05060 IPR012340 Nucleic acid-binding, OB-fold E4O04_05060 IPR004522 Asparagine-tRNA ligase E4O04_05060 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_05060 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb E4O04_05060 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) E4O04_05070 IPR001295 Dihydroorotate dehydrogenase, conserved site E4O04_05070 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 E4O04_05070 IPR033888 Dihydroorotate dehydrogenase, class 1B E4O04_05070 IPR005720 Dihydroorotate dehydrogenase domain E4O04_05070 IPR013785 Aldolase-type TIM barrel E4O04_05070 IPR024920 Dihydroorotate dehydrogenase, class 1 E4O04_05075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_05075 IPR035906 MetI-like superfamily E4O04_05080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_05080 IPR035906 MetI-like superfamily E4O04_05080 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E4O04_05085 IPR000914 Solute-binding protein family 5 domain E4O04_05085 IPR039424 Solute-binding protein family 5 E4O04_05085 IPR023765 Solute-binding protein family 5, conserved site E4O04_05085 IPR030678 Peptide/nickel binding protein, MppA-type E4O04_05090 IPR003593 AAA+ ATPase domain E4O04_05090 IPR003439 ABC transporter-like E4O04_05090 IPR017871 ABC transporter, conserved site E4O04_05090 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_05090 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05095 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05095 IPR003593 AAA+ ATPase domain E4O04_05095 IPR003439 ABC transporter-like E4O04_05095 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_05095 IPR017871 ABC transporter, conserved site E4O04_05100 IPR039424 Solute-binding protein family 5 E4O04_05100 IPR023765 Solute-binding protein family 5, conserved site E4O04_05100 IPR000914 Solute-binding protein family 5 domain E4O04_05100 IPR030678 Peptide/nickel binding protein, MppA-type E4O04_05115 IPR034704 L28p-like E4O04_05115 IPR026569 Ribosomal protein L28/L24 E4O04_05115 IPR037147 Ribosomal protein L28/L24 superfamily E4O04_05115 IPR001383 Ribosomal protein L28 E4O04_05125 IPR002698 5-formyltetrahydrofolate cyclo-ligase E4O04_05125 IPR037171 NagB/RpiA transferase-like E4O04_05125 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily E4O04_05140 IPR012341 Six-hairpin glycosidase-like superfamily E4O04_05140 IPR008928 Six-hairpin glycosidase superfamily E4O04_05140 IPR001661 Glycoside hydrolase, family 37 E4O04_05145 IPR033922 NAD(P) binding domain of glutamate dehydrogenase E4O04_05145 IPR033524 Leu/Phe/Val dehydrogenases active site E4O04_05145 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal E4O04_05145 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase E4O04_05145 IPR014362 Glutamate dehydrogenase E4O04_05145 IPR036291 NAD(P)-binding domain superfamily E4O04_05145 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain E4O04_05150 IPR024002 Formate/nitrite transporter, conserved site E4O04_05150 IPR000292 Formate/nitrite transporter E4O04_05150 IPR023271 Aquaporin-like E4O04_05155 IPR015815 3-hydroxyisobutyrate dehydrogenase-related E4O04_05155 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E4O04_05155 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E4O04_05155 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding E4O04_05155 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site E4O04_05155 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain E4O04_05155 IPR036291 NAD(P)-binding domain superfamily E4O04_05160 IPR023031 Orotate phosphoribosyltransferase E4O04_05160 IPR004467 Orotate phosphoribosyl transferase domain E4O04_05160 IPR000836 Phosphoribosyltransferase domain E4O04_05160 IPR029057 Phosphoribosyltransferase-like E4O04_05170 IPR001492 Flagellin E4O04_05170 IPR042187 Flagellin, C-terminal domain, subdomain 2 E4O04_05170 IPR001029 Flagellin, D0/D1 domain E4O04_05175 IPR001444 Flagellar basal body rod protein, N-terminal E4O04_05175 IPR019776 Flagellar basal body rod protein, conserved site E4O04_05175 IPR020013 Flagellar hook-basal body protein, FlgE/F/G E4O04_05175 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E4O04_05175 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like E4O04_05175 IPR012834 Flagellar basal-body rod FlgG E4O04_05180 IPR019776 Flagellar basal body rod protein, conserved site E4O04_05180 IPR012834 Flagellar basal-body rod FlgG E4O04_05180 IPR020013 Flagellar hook-basal body protein, FlgE/F/G E4O04_05180 IPR001444 Flagellar basal body rod protein, N-terminal E4O04_05180 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like E4O04_05180 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E4O04_05185 IPR019301 Flagellar protein FlgJ, N-terminal E4O04_05190 IPR033479 Double Cache domain 1 E4O04_05190 IPR003660 HAMP domain E4O04_05190 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_05190 IPR029151 Periplasmic sensor-like domain superfamily E4O04_05195 IPR017871 ABC transporter, conserved site E4O04_05195 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05195 IPR003439 ABC transporter-like E4O04_05195 IPR041102 UvrA, interaction domain E4O04_05195 IPR041552 UvrA DNA-binding domain E4O04_05195 IPR004602 UvrABC system subunit A E4O04_05205 IPR010994 RuvA domain 2-like E4O04_05205 IPR037027 YqgF/RNase H-like domain superfamily E4O04_05205 IPR006641 YqgF/RNase H-like domain E4O04_05205 IPR032639 Tex protein, YqgF-like domain E4O04_05205 IPR012337 Ribonuclease H-like superfamily E4O04_05205 IPR023319 Tex-like protein, HTH domain superfamily E4O04_05205 IPR012340 Nucleic acid-binding, OB-fold E4O04_05205 IPR022967 RNA-binding domain, S1 E4O04_05205 IPR041692 HHH domain 9 E4O04_05205 IPR018974 Tex-like protein, N-terminal E4O04_05205 IPR003029 S1 domain E4O04_05205 IPR023323 Tex-like domain superfamily E4O04_05230 IPR027065 Lon protease E4O04_05230 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_05230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_05230 IPR041699 Lon protease, AAA domain E4O04_05230 IPR008269 Peptidase S16, Lon proteolytic domain E4O04_05235 IPR003753 Exonuclease VII, large subunit E4O04_05235 IPR025824 OB-fold nucleic acid binding domain E4O04_05235 IPR020579 Exonuclease VII, large subunit, C-terminal E4O04_05245 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit E4O04_05245 IPR004681 TRAP transporter large membrane protein DctM E4O04_05245 IPR007387 TRAP transporter, small membrane protein DctQ E4O04_05255 IPR031823 TRAP transporter T-component E4O04_05255 IPR038537 TatT superfamily E4O04_05265 IPR036849 Enolase-like, C-terminal domain superfamily E4O04_05265 IPR022662 Methylaspartate ammonia-lyase, C-terminal E4O04_05265 IPR029017 Enolase-like, N-terminal E4O04_05265 IPR006395 Methylaspartate ammonia-lyase E4O04_05265 IPR022665 Methylaspartate ammonia-lyase, N-terminal E4O04_05270 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase E4O04_05270 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_05270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_05270 IPR023603 Threonine aldolase E4O04_05270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_05275 IPR001920 Asp/Glu racemase E4O04_05275 IPR018187 Asp/Glu racemase, active site 1 E4O04_05275 IPR033134 Asp/Glu racemase, active site 2 E4O04_05275 IPR004380 Aspartate racemase E4O04_05275 IPR015942 Asp/Glu/hydantoin racemase E4O04_05280 IPR001991 Sodium:dicarboxylate symporter E4O04_05280 IPR018107 Sodium:dicarboxylate symporter, conserved site E4O04_05280 IPR023954 C4-dicarboxylate transport protein E4O04_05280 IPR036458 Sodium:dicarboxylate symporter superfamily E4O04_05285 IPR006158 Cobalamin (vitamin B12)-binding domain E4O04_05285 IPR036724 Cobalamin-binding domain superfamily E4O04_05285 IPR006394 Glutamate mutase sigma subunit E4O04_05285 IPR006159 Methylmalonyl-CoA mutase, C-terminal E4O04_05290 IPR006230 Protein MutL E4O04_05295 IPR011332 Zinc-binding ribosomal protein E4O04_05295 IPR002677 Ribosomal protein L32p E4O04_05300 IPR009081 Phosphopantetheine binding ACP domain E4O04_05300 IPR036736 ACP-like superfamily E4O04_05300 IPR003231 Acyl carrier protein (ACP) E4O04_05305 IPR014720 Double-stranded RNA-binding domain E4O04_05305 IPR011907 Ribonuclease III E4O04_05305 IPR000999 Ribonuclease III domain E4O04_05305 IPR036389 Ribonuclease III, endonuclease domain superfamily E4O04_05310 IPR002068 Alpha crystallin/Hsp20 domain E4O04_05310 IPR008978 HSP20-like chaperone E4O04_05310 IPR031107 Small heat shock protein HSP20 E4O04_05325 IPR023068 CCA-adding enzyme, firmicutes E4O04_05325 IPR002646 Poly A polymerase, head domain E4O04_05325 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain E4O04_05325 IPR032810 CCA-adding enzyme, C-terminal E4O04_05330 IPR004488 Magnesium/cobalt transport protein CorA E4O04_05330 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB E4O04_05335 IPR036291 NAD(P)-binding domain superfamily E4O04_05335 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain E4O04_05335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_05340 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic E4O04_05340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_05340 IPR023465 Riboflavin kinase domain superfamily E4O04_05340 IPR002606 Riboflavin kinase, bacterial E4O04_05340 IPR015864 FAD synthetase E4O04_05340 IPR023468 Riboflavin kinase E4O04_05345 IPR005290 Ribosomal protein S15, bacterial-type E4O04_05345 IPR000589 Ribosomal protein S15 E4O04_05345 IPR009068 S15/NS1, RNA-binding E4O04_05350 IPR004087 K Homology domain E4O04_05350 IPR036612 K Homology domain, type 1 superfamily E4O04_05350 IPR012340 Nucleic acid-binding, OB-fold E4O04_05350 IPR036345 Exoribonuclease, PH domain 2 superfamily E4O04_05350 IPR015847 Exoribonuclease, phosphorolytic domain 2 E4O04_05350 IPR001247 Exoribonuclease, phosphorolytic domain 1 E4O04_05350 IPR004088 K Homology domain, type 1 E4O04_05350 IPR027408 PNPase/RNase PH domain superfamily E4O04_05350 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_05350 IPR022967 RNA-binding domain, S1 E4O04_05350 IPR003029 S1 domain E4O04_05350 IPR012162 Polyribonucleotide nucleotidyltransferase E4O04_05350 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain E4O04_05355 IPR029054 dUTPase-like E4O04_05355 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase E4O04_05355 IPR033704 dUTPase, trimeric E4O04_05355 IPR036157 dUTPase-like superfamily E4O04_05370 IPR007401 Protein of unknown function DUF454 E4O04_05375 IPR005679 Ribosomal protein S12, bacterial-type E4O04_05375 IPR012340 Nucleic acid-binding, OB-fold E4O04_05375 IPR006032 Ribosomal protein S12/S23 E4O04_05380 IPR000235 Ribosomal protein S5/S7 E4O04_05380 IPR005717 Ribosomal protein S7, bacterial/organellar-type E4O04_05380 IPR020606 Ribosomal protein S7, conserved site E4O04_05380 IPR023798 Ribosomal protein S7 domain E4O04_05380 IPR036823 Ribosomal protein S7 domain superfamily E4O04_05385 IPR009022 Elongation factor G, domain III E4O04_05385 IPR041095 Elongation Factor G, domain II E4O04_05385 IPR004161 Translation elongation factor EFTu-like, domain 2 E4O04_05385 IPR031157 Tr-type G domain, conserved site E4O04_05385 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05385 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_05385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_05385 IPR005225 Small GTP-binding protein domain E4O04_05385 IPR000795 Transcription factor, GTP-binding domain E4O04_05385 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_05385 IPR000640 Elongation factor EFG, domain V-like E4O04_05385 IPR035647 EF-G domain III/V-like E4O04_05385 IPR005517 Translation elongation factor EFG/EF2, domain IV E4O04_05385 IPR004540 Translation elongation factor EFG/EF2 E4O04_05400 IPR024934 Rubredoxin-like domain E4O04_05400 IPR018527 Rubredoxin, iron-binding site E4O04_05400 IPR024922 Rubredoxin E4O04_05400 IPR024935 Rubredoxin domain E4O04_05410 IPR003593 AAA+ ATPase domain E4O04_05410 IPR025944 Sigma-54 interaction domain, conserved site E4O04_05410 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E4O04_05410 IPR002197 DNA binding HTH domain, Fis-type E4O04_05410 IPR009057 Homeobox-like domain superfamily E4O04_05410 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E4O04_05410 IPR002078 RNA polymerase sigma factor 54 interaction domain E4O04_05410 IPR035965 PAS domain superfamily E4O04_05410 IPR000014 PAS domain E4O04_05410 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05410 IPR029016 GAF-like domain superfamily E4O04_05415 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_05415 IPR027619 Putative C-S lyase E4O04_05415 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_05415 IPR004839 Aminotransferase, class I/classII E4O04_05415 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_05420 IPR004770 Na+/H+ antiporter NhaC E4O04_05420 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal E4O04_05425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_05425 IPR003660 HAMP domain E4O04_05425 IPR033479 Double Cache domain 1 E4O04_05430 IPR003439 ABC transporter-like E4O04_05430 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC E4O04_05430 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_05430 IPR003593 AAA+ ATPase domain E4O04_05430 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05430 IPR011527 ABC transporter type 1, transmembrane domain E4O04_05435 IPR039421 Type I protein exporter E4O04_05435 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_05435 IPR011527 ABC transporter type 1, transmembrane domain E4O04_05435 IPR003439 ABC transporter-like E4O04_05435 IPR017871 ABC transporter, conserved site E4O04_05435 IPR011917 ABC transporter, lipid A export, MsbA E4O04_05435 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05435 IPR003593 AAA+ ATPase domain E4O04_05440 IPR002528 Multi antimicrobial extrusion protein E4O04_05445 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_05445 IPR018631 AAA-ATPase-like domain E4O04_05450 IPR016187 C-type lectin fold E4O04_05450 IPR005532 Sulfatase-modifying factor enzyme E4O04_05450 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_05460 IPR003593 AAA+ ATPase domain E4O04_05460 IPR011527 ABC transporter type 1, transmembrane domain E4O04_05460 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_05460 IPR017871 ABC transporter, conserved site E4O04_05460 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05460 IPR039421 Type I protein exporter E4O04_05460 IPR003439 ABC transporter-like E4O04_05465 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_05465 IPR011527 ABC transporter type 1, transmembrane domain E4O04_05465 IPR039421 Type I protein exporter E4O04_05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05465 IPR003593 AAA+ ATPase domain E4O04_05465 IPR017871 ABC transporter, conserved site E4O04_05465 IPR003439 ABC transporter-like E4O04_05475 IPR015413 Methionyl/Leucyl tRNA synthetase E4O04_05475 IPR012340 Nucleic acid-binding, OB-fold E4O04_05475 IPR002547 tRNA-binding domain E4O04_05475 IPR033911 Methioninyl-tRNA synthetase core domain E4O04_05475 IPR029038 Methionyl-tRNA synthetase, Zn-domain E4O04_05475 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E4O04_05475 IPR023458 Methionine-tRNA ligase, type 1 E4O04_05475 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain E4O04_05475 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E4O04_05475 IPR014758 Methionyl-tRNA synthetase E4O04_05475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_05485 IPR017871 ABC transporter, conserved site E4O04_05485 IPR003439 ABC transporter-like E4O04_05485 IPR003593 AAA+ ATPase domain E4O04_05485 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_05485 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05490 IPR003439 ABC transporter-like E4O04_05490 IPR017871 ABC transporter, conserved site E4O04_05490 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_05490 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05490 IPR003593 AAA+ ATPase domain E4O04_05495 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E4O04_05495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_05495 IPR035906 MetI-like superfamily E4O04_05500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_05500 IPR035906 MetI-like superfamily E4O04_05505 IPR030678 Peptide/nickel binding protein, MppA-type E4O04_05505 IPR000914 Solute-binding protein family 5 domain E4O04_05505 IPR023765 Solute-binding protein family 5, conserved site E4O04_05505 IPR039424 Solute-binding protein family 5 E4O04_05515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_05515 IPR035906 MetI-like superfamily E4O04_05520 IPR035906 MetI-like superfamily E4O04_05520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_05520 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E4O04_05525 IPR003593 AAA+ ATPase domain E4O04_05525 IPR003439 ABC transporter-like E4O04_05525 IPR017871 ABC transporter, conserved site E4O04_05525 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_05525 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05530 IPR003593 AAA+ ATPase domain E4O04_05530 IPR003439 ABC transporter-like E4O04_05530 IPR017871 ABC transporter, conserved site E4O04_05530 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_05530 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05535 IPR012349 FMN-binding split barrel E4O04_05535 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E4O04_05535 IPR001279 Metallo-beta-lactamase E4O04_05535 IPR029039 Flavoprotein-like superfamily E4O04_05535 IPR008254 Flavodoxin/nitric oxide synthase E4O04_05535 IPR002563 Flavin reductase like domain E4O04_05540 IPR002178 PTS EIIA type-2 domain E4O04_05540 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN E4O04_05540 IPR016152 Phosphotransferase/anion transporter E4O04_05545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_05545 IPR011530 Ribosomal RNA adenine dimethylase E4O04_05545 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm E4O04_05545 IPR023165 rRNA adenine dimethylase-like E4O04_05545 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal E4O04_05545 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site E4O04_05555 IPR006145 Pseudouridine synthase, RsuA/RluA E4O04_05555 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E4O04_05555 IPR006225 Pseudouridine synthase, RluC/RluD E4O04_05555 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_05560 IPR006145 Pseudouridine synthase, RsuA/RluA E4O04_05560 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E4O04_05560 IPR006225 Pseudouridine synthase, RluC/RluD E4O04_05560 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_05560 IPR036986 RNA-binding S4 domain superfamily E4O04_05560 IPR002942 RNA-binding S4 domain E4O04_05565 IPR004101 Mur ligase, C-terminal E4O04_05565 IPR036615 Mur ligase, C-terminal domain superfamily E4O04_05565 IPR013221 Mur ligase, central E4O04_05565 IPR036565 Mur-like, catalytic domain superfamily E4O04_05565 IPR018109 Folylpolyglutamate synthetase, conserved site E4O04_05565 IPR001645 Folylpolyglutamate synthetase E4O04_05570 IPR036565 Mur-like, catalytic domain superfamily E4O04_05570 IPR004101 Mur ligase, C-terminal E4O04_05570 IPR036615 Mur ligase, C-terminal domain superfamily E4O04_05570 IPR013221 Mur ligase, central E4O04_05570 IPR000713 Mur ligase, N-terminal catalytic domain E4O04_05570 IPR005758 UDP-N-acetylmuramate--L-alanine ligase E4O04_05575 IPR013527 YicC-like, N-terminal E4O04_05575 IPR005229 Conserved hypothetical protein CHP00255 E4O04_05575 IPR013551 Domain of unknown function DUF1732 E4O04_05580 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05580 IPR011994 Cytidylate kinase domain E4O04_05580 IPR011892 Cytidylate kinase, putative E4O04_05595 IPR012947 Threonyl/alanyl tRNA synthetase, SAD E4O04_05595 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E4O04_05595 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_05595 IPR004154 Anticodon-binding E4O04_05595 IPR036621 Anticodon-binding domain superfamily E4O04_05595 IPR002320 Threonine-tRNA ligase, class IIa E4O04_05595 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily E4O04_05595 IPR033728 Threonine-tRNA ligase catalytic core domain E4O04_05610 IPR032585 Protein of unknown function DUF4912 E4O04_05620 IPR011079 Alanine racemase, C-terminal E4O04_05620 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal E4O04_05620 IPR001608 Alanine racemase, N-terminal E4O04_05620 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site E4O04_05620 IPR000821 Alanine racemase E4O04_05620 IPR029066 PLP-binding barrel E4O04_05625 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase E4O04_05655 IPR002501 Pseudouridine synthase II, N-terminal E4O04_05655 IPR014780 tRNA pseudouridine synthase II, TruB E4O04_05655 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_05660 IPR015946 K homology domain-like, alpha/beta E4O04_05660 IPR000238 Ribosome-binding factor A E4O04_05660 IPR023799 Ribosome-binding factor A domain superfamily E4O04_05660 IPR020053 Ribosome-binding factor A, conserved site E4O04_05665 IPR006847 Translation initiation factor IF-2, N-terminal E4O04_05665 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05665 IPR005225 Small GTP-binding protein domain E4O04_05665 IPR000795 Transcription factor, GTP-binding domain E4O04_05665 IPR000178 Translation initiation factor aIF-2, bacterial-like E4O04_05665 IPR015760 Translation initiation factor IF- 2 E4O04_05665 IPR036925 Translation initiation factor IF-2, domain 3 superfamily E4O04_05665 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_05665 IPR023115 Translation initiation factor IF- 2, domain 3 E4O04_05670 IPR025249 KH domain, NusA-like E4O04_05670 IPR009019 K homology domain superfamily, prokaryotic type E4O04_05670 IPR012340 Nucleic acid-binding, OB-fold E4O04_05670 IPR030842 Transcription termination/antitermination protein NusA, bacterial E4O04_05670 IPR036555 NusA, N-terminal domain superfamily E4O04_05670 IPR022967 RNA-binding domain, S1 E4O04_05670 IPR003029 S1 domain E4O04_05670 IPR013735 Transcription factor NusA, N-terminal E4O04_05670 IPR010213 Transcription termination factor NusA E4O04_05670 IPR015946 K homology domain-like, alpha/beta E4O04_05670 IPR004087 K Homology domain E4O04_05675 IPR028998 Ribosome maturation factor RimP, C-terminal E4O04_05675 IPR003728 Ribosome maturation factor RimP E4O04_05675 IPR035956 RimP, N-terminal domain superfamily E4O04_05675 IPR028989 Ribosome maturation factor RimP, N-terminal E4O04_05675 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily E4O04_05680 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site E4O04_05680 IPR000183 Ornithine/DAP/Arg decarboxylase E4O04_05680 IPR002433 Ornithine decarboxylase E4O04_05680 IPR029066 PLP-binding barrel E4O04_05680 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal E4O04_05680 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal E4O04_05680 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal E4O04_05680 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site E4O04_05695 IPR006259 Adenylate kinase subfamily E4O04_05695 IPR000850 Adenylate kinase/UMP-CMP kinase E4O04_05695 IPR033690 Adenylate kinase, conserved site E4O04_05695 IPR007862 Adenylate kinase, active site lid domain E4O04_05695 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05705 IPR012337 Ribonuclease H-like superfamily E4O04_05705 IPR025948 HTH-like domain E4O04_05705 IPR038965 Transposase InsF-like E4O04_05705 IPR001584 Integrase, catalytic core E4O04_05705 IPR036397 Ribonuclease H superfamily E4O04_05710 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_05710 IPR018631 AAA-ATPase-like domain E4O04_05725 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05725 IPR003593 AAA+ ATPase domain E4O04_05725 IPR017871 ABC transporter, conserved site E4O04_05725 IPR003439 ABC transporter-like E4O04_05730 IPR003838 ABC transporter permease protein domain E4O04_05730 IPR003593 AAA+ ATPase domain E4O04_05730 IPR025857 MacB-like periplasmic core domain E4O04_05730 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05730 IPR017871 ABC transporter, conserved site E4O04_05730 IPR003439 ABC transporter-like E4O04_05730 IPR017911 ABC transporter, macrolide export, ATP-binding domain E4O04_05735 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) E4O04_05735 IPR004525 Elongation factor P--(R)-beta-lysine ligase E4O04_05735 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_05750 IPR013976 Metal-dependent hydrolase HDOD E4O04_05755 IPR029035 DHS-like NAD/FAD-binding domain superfamily E4O04_05755 IPR003000 Sirtuin family E4O04_05755 IPR026591 Sirtuin, catalytic core small domain superfamily E4O04_05755 IPR028628 Sirtuin, class U E4O04_05755 IPR026590 Sirtuin family, catalytic core domain E4O04_05765 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_05765 IPR001406 Pseudouridine synthase I, TruA E4O04_05765 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain E4O04_05765 IPR020095 Pseudouridine synthase I, TruA, C-terminal E4O04_05770 IPR018708 Protein of unknown function DUF2225 E4O04_05780 IPR029001 Inosine triphosphate pyrophosphatase-like E4O04_05780 IPR020922 dITP/XTP pyrophosphatase E4O04_05780 IPR002637 Ham1-like protein E4O04_05785 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_05785 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_05785 IPR017871 ABC transporter, conserved site E4O04_05785 IPR003593 AAA+ ATPase domain E4O04_05785 IPR003439 ABC transporter-like E4O04_05785 IPR039421 Type I protein exporter E4O04_05785 IPR011527 ABC transporter type 1, transmembrane domain E4O04_05790 IPR029058 Alpha/Beta hydrolase fold E4O04_05790 IPR033140 Lipase, GDXG, putative serine active site E4O04_05790 IPR002168 Lipase, GDXG, putative histidine active site E4O04_05790 IPR013094 Alpha/beta hydrolase fold-3 E4O04_05795 IPR001539 Peptidase U32 E4O04_05795 IPR032525 Peptidase family U32, C-terminal E4O04_05815 IPR013441 Tyrosine phenol-lyase E4O04_05815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_05815 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_05815 IPR011166 Beta-eliminating lyase family E4O04_05815 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase E4O04_05815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_05815 IPR018176 Tryptophanase, conserved site E4O04_05835 IPR036513 STAS domain superfamily E4O04_05835 IPR002645 STAS domain E4O04_05835 IPR003658 Anti-sigma factor antagonist E4O04_05875 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type E4O04_05875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_05880 IPR000453 Chorismate synthase E4O04_05880 IPR035904 Chorismate synthase AroC superfamily E4O04_06025 IPR041468 ParB/Spo0J, HTH domain E4O04_06025 IPR004437 ParB/RepB/Spo0J partition protein E4O04_06025 IPR003115 ParB/Sulfiredoxin E4O04_06025 IPR036086 ParB/Sulfiredoxin superfamily E4O04_06075 IPR004107 Integrase, SAM-like, N-terminal E4O04_06075 IPR011932 Tyrosine recombinase XerD E4O04_06075 IPR011010 DNA breaking-rejoining enzyme, catalytic core E4O04_06075 IPR023009 Tyrosine recombinase XerC/XerD E4O04_06075 IPR013762 Integrase-like, catalytic domain superfamily E4O04_06075 IPR010998 Integrase/recombinase, N-terminal E4O04_06075 IPR002104 Integrase, catalytic domain E4O04_06090 IPR027410 TCP-1-like chaperonin intermediate domain superfamily E4O04_06090 IPR027413 GroEL-like equatorial domain superfamily E4O04_06090 IPR002423 Chaperonin Cpn60/TCP-1 family E4O04_06090 IPR027409 GroEL-like apical domain superfamily E4O04_06090 IPR001844 Chaperonin Cpn60 E4O04_06090 IPR018370 Chaperonin Cpn60, conserved site E4O04_06115 IPR012136 NADP transhydrogenase, beta subunit E4O04_06115 IPR029035 DHS-like NAD/FAD-binding domain superfamily E4O04_06115 IPR034300 NADP transhydrogenase beta-like domain E4O04_06125 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 E4O04_06125 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal E4O04_06125 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal E4O04_06125 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain E4O04_06125 IPR036291 NAD(P)-binding domain superfamily E4O04_06125 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 E4O04_06125 IPR026255 NAD(P) transhydrogenase, alpha subunit E4O04_06155 IPR009057 Homeobox-like domain superfamily E4O04_06155 IPR012337 Ribonuclease H-like superfamily E4O04_06155 IPR001584 Integrase, catalytic core E4O04_06155 IPR036397 Ribonuclease H superfamily E4O04_06165 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain E4O04_06165 IPR029058 Alpha/Beta hydrolase fold E4O04_06165 IPR023302 Peptidase S9A, N-terminal domain E4O04_06165 IPR002470 Peptidase S9A, prolyl oligopeptidase E4O04_06165 IPR002471 Peptidase S9, serine active site E4O04_06170 IPR007159 SpoVT-AbrB domain E4O04_06170 IPR035644 MraZ, C-terminal E4O04_06170 IPR038619 MraZ superfamily E4O04_06170 IPR035642 MraZ, N-terminal E4O04_06170 IPR003444 Transcriptional regulator MraZ E4O04_06170 IPR020603 MraZ domain E4O04_06170 IPR037914 SpoVT-AbrB domain superfamily E4O04_06175 IPR002903 Ribosomal RNA small subunit methyltransferase H E4O04_06175 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily E4O04_06175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_06185 IPR004101 Mur ligase, C-terminal E4O04_06185 IPR000713 Mur ligase, N-terminal catalytic domain E4O04_06185 IPR035911 MurE/MurF, N-terminal E4O04_06185 IPR013221 Mur ligase, central E4O04_06185 IPR036615 Mur ligase, C-terminal domain superfamily E4O04_06185 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase E4O04_06185 IPR036565 Mur-like, catalytic domain superfamily E4O04_06190 IPR013437 Probable peptidoglycan glycosyltransferase FtsW E4O04_06190 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site E4O04_06190 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA E4O04_06200 IPR003494 SHS2 domain inserted in FtsA E4O04_06200 IPR020823 Cell division protein FtsA E4O04_06205 IPR020805 Cell division protein FtsZ, conserved site E4O04_06205 IPR024757 Cell division protein FtsZ, C-terminal E4O04_06205 IPR008280 Tubulin/FtsZ, C-terminal E4O04_06205 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain E4O04_06205 IPR036525 Tubulin/FtsZ, GTPase domain superfamily E4O04_06205 IPR003008 Tubulin/FtsZ, GTPase domain E4O04_06205 IPR000158 Cell division protein FtsZ E4O04_06210 IPR011010 DNA breaking-rejoining enzyme, catalytic core E4O04_06210 IPR023009 Tyrosine recombinase XerC/XerD E4O04_06210 IPR011932 Tyrosine recombinase XerD E4O04_06210 IPR004107 Integrase, SAM-like, N-terminal E4O04_06210 IPR010998 Integrase/recombinase, N-terminal E4O04_06210 IPR002104 Integrase, catalytic domain E4O04_06210 IPR013762 Integrase-like, catalytic domain superfamily E4O04_06220 IPR003488 DNA recombination-mediator protein A E4O04_06220 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_06220 IPR041614 DprA, winged helix domain E4O04_06225 IPR000380 DNA topoisomerase, type IA E4O04_06225 IPR023406 DNA topoisomerase, type IA, active site E4O04_06225 IPR034149 DNA topoisomerase 1, TOPRIM domain E4O04_06225 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 E4O04_06225 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 E4O04_06225 IPR023405 DNA topoisomerase, type IA, core domain E4O04_06225 IPR003602 DNA topoisomerase, type IA, DNA-binding domain E4O04_06225 IPR013498 DNA topoisomerase, type IA, zn finger E4O04_06225 IPR005733 DNA topoisomerase I, bacterial-type E4O04_06225 IPR028612 DNA topoisomerase I, type IA E4O04_06225 IPR006171 TOPRIM domain E4O04_06225 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 E4O04_06225 IPR013497 DNA topoisomerase, type IA, central E4O04_06225 IPR003601 DNA topoisomerase, type IA, domain 2 E4O04_06230 IPR011010 DNA breaking-rejoining enzyme, catalytic core E4O04_06230 IPR013762 Integrase-like, catalytic domain superfamily E4O04_06230 IPR002104 Integrase, catalytic domain E4O04_06230 IPR010998 Integrase/recombinase, N-terminal E4O04_06230 IPR004107 Integrase, SAM-like, N-terminal E4O04_06230 IPR023009 Tyrosine recombinase XerC/XerD E4O04_06235 IPR001353 Proteasome, subunit alpha/beta E4O04_06235 IPR022281 ATP-dependent protease, HslV subunit E4O04_06235 IPR029055 Nucleophile aminohydrolases, N-terminal E4O04_06235 IPR023333 Proteasome B-type subunit E4O04_06240 IPR003593 AAA+ ATPase domain E4O04_06240 IPR003959 ATPase, AAA-type, core E4O04_06240 IPR019489 Clp ATPase, C-terminal E4O04_06240 IPR004491 Heat shock protein HslU E4O04_06240 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06245 IPR019776 Flagellar basal body rod protein, conserved site E4O04_06245 IPR006300 Flagellar basal-body rod protein FlgB E4O04_06245 IPR001444 Flagellar basal body rod protein, N-terminal E4O04_06250 IPR006299 Flagellar basal-body rod protein FlgC E4O04_06250 IPR019776 Flagellar basal body rod protein, conserved site E4O04_06250 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E4O04_06250 IPR001444 Flagellar basal body rod protein, N-terminal E4O04_06255 IPR001624 Flagellar hook-basal body complex protein FliE E4O04_06260 IPR013556 Flagellar M-ring C-terminal E4O04_06260 IPR000067 Flagellar M-ring protein FliF E4O04_06260 IPR006182 Secretory protein YscJ/FliF E4O04_06265 IPR000090 Flagellar motor switch protein FliG E4O04_06265 IPR023087 Flagellar motor switch protein FliG, C-terminal E4O04_06265 IPR011002 Flagellar motor switch protein FliG, alpha-helical E4O04_06265 IPR032779 Flagellar motor switch protein FliG, middle domain E4O04_06265 IPR028263 Flagellar motor switch protein FliG, N-terminal domain E4O04_06270 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE E4O04_06275 IPR040627 T3SS EscN ATPase, C-terminal E4O04_06275 IPR005714 ATPase, type III secretion system, FliI/YscN E4O04_06275 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06275 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 E4O04_06275 IPR032463 ATPase, type III secretion system, FliI E4O04_06275 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain E4O04_06275 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site E4O04_06275 IPR003593 AAA+ ATPase domain E4O04_06275 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E4O04_06290 IPR017853 Glycoside hydrolase superfamily E4O04_06290 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily E4O04_06290 IPR001764 Glycoside hydrolase, family 3, N-terminal E4O04_06290 IPR022956 Beta-hexosaminidase, bacterial E4O04_06290 IPR019800 Glycoside hydrolase, family 3, active site E4O04_06300 IPR037294 ABC transporter, BtuC-like E4O04_06300 IPR001626 ABC transporter, TroCD-like E4O04_06305 IPR037294 ABC transporter, BtuC-like E4O04_06305 IPR001626 ABC transporter, TroCD-like E4O04_06310 IPR003593 AAA+ ATPase domain E4O04_06310 IPR003439 ABC transporter-like E4O04_06310 IPR017871 ABC transporter, conserved site E4O04_06310 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06315 IPR006127 Periplasmic solute binding protein, ZnuA-like E4O04_06315 IPR006128 Adhesion lipoprotein E4O04_06315 IPR006129 Adhesin B E4O04_06320 IPR019405 Lactonase, 7-bladed beta propeller E4O04_06320 IPR011045 Nitrous oxide reductase, N-terminal E4O04_06320 IPR015943 WD40/YVTN repeat-like-containing domain superfamily E4O04_06335 IPR001279 Metallo-beta-lactamase E4O04_06335 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E4O04_06360 IPR020861 Triosephosphate isomerase, active site E4O04_06360 IPR013785 Aldolase-type TIM barrel E4O04_06360 IPR035990 Triosephosphate isomerase superfamily E4O04_06360 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic E4O04_06360 IPR000652 Triosephosphate isomerase E4O04_06375 IPR003714 PhoH-like protein E4O04_06375 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06380 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain E4O04_06380 IPR006675 HDIG domain E4O04_06380 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain E4O04_06380 IPR003607 HD/PDEase domain E4O04_06380 IPR006674 HD domain E4O04_06385 IPR023091 Metalloprotease catalytic domain superfamily, predicted E4O04_06385 IPR002036 Endoribonuclease YbeY E4O04_06385 IPR020549 Endoribonuclease YbeY, conserved site E4O04_06390 IPR000644 CBS domain E4O04_06390 IPR036318 FAD-binding, type PCMH-like superfamily E4O04_06390 IPR016169 FAD-binding, type PCMH, subdomain 2 E4O04_06390 IPR005170 Transporter-associated domain E4O04_06405 IPR002881 Domain of unknown function DUF58 E4O04_06405 IPR036465 von Willebrand factor A-like domain superfamily E4O04_06415 IPR002035 von Willebrand factor, type A E4O04_06415 IPR033881 von Willebrand factor domain BatA-type E4O04_06415 IPR036465 von Willebrand factor A-like domain superfamily E4O04_06435 IPR000432 DNA mismatch repair protein MutS, C-terminal E4O04_06435 IPR007696 DNA mismatch repair protein MutS, core E4O04_06435 IPR036187 DNA mismatch repair protein MutS, core domain superfamily E4O04_06435 IPR005747 Endonuclease MutS2 E4O04_06435 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06435 IPR002625 Smr domain E4O04_06435 IPR036063 Smr domain superfamily E4O04_06440 IPR037522 HD-GYP domain E4O04_06440 IPR006674 HD domain E4O04_06440 IPR001789 Signal transduction response regulator, receiver domain E4O04_06440 IPR011006 CheY-like superfamily E4O04_06440 IPR003607 HD/PDEase domain E4O04_06455 IPR001463 Sodium:alanine symporter E4O04_06460 IPR017189 CTP:phosphocholine cytidylyltransferase E4O04_06460 IPR029044 Nucleotide-diphospho-sugar transferases E4O04_06460 IPR025877 MobA-like NTP transferase E4O04_06465 IPR018093 BCCT transporter, conserved site E4O04_06465 IPR000060 BCCT transporter family E4O04_06465 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT E4O04_06475 IPR011990 Tetratricopeptide-like helical domain superfamily E4O04_06480 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type E4O04_06480 IPR011005 Dihydropteroate synthase-like E4O04_06480 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial E4O04_06485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_06485 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain E4O04_06485 IPR004090 Chemotaxis methyl-accepting receptor E4O04_06485 IPR003660 HAMP domain E4O04_06495 IPR036676 PurM-like, C-terminal domain superfamily E4O04_06495 IPR010918 PurM-like, C-terminal domain E4O04_06495 IPR016188 PurM-like, N-terminal domain E4O04_06495 IPR036921 PurM-like, N-terminal domain superfamily E4O04_06495 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase E4O04_06500 IPR020559 Phosphoribosylglycinamide synthetase, conserved site E4O04_06500 IPR011761 ATP-grasp fold E4O04_06500 IPR013815 ATP-grasp fold, subdomain 1 E4O04_06500 IPR016185 Pre-ATP-grasp domain superfamily E4O04_06500 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4O04_06500 IPR000115 Phosphoribosylglycinamide synthetase E4O04_06500 IPR020560 Phosphoribosylglycinamide synthetase, C-domain E4O04_06500 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily E4O04_06500 IPR011054 Rudiment single hybrid motif E4O04_06500 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal E4O04_06510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_06510 IPR001091 Restriction/modification DNA-methylase E4O04_06510 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_06510 IPR002941 DNA methylase N-4/N-6 E4O04_06515 IPR011335 Restriction endonuclease type II-like E4O04_06515 IPR021191 Restriction endonuclease, type II, DpmII E4O04_06515 IPR007637 Restriction endonuclease, type II, DpmII-like E4O04_06520 IPR023095 Adenine-specific methyltransferase, domain 2 E4O04_06520 IPR012263 Adenine modification methylase, M.EcoRV-type E4O04_06520 IPR012327 D12 class N6 adenine-specific DNA methyltransferase E4O04_06520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_06530 IPR036010 2Fe-2S ferredoxin-like superfamily E4O04_06530 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E4O04_06530 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_06530 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_06530 IPR004108 Iron hydrogenase, large subunit, C-terminal E4O04_06530 IPR003149 Iron hydrogenase, small subunit E4O04_06530 IPR036991 Iron hydrogenase, small subunit superfamily E4O04_06530 IPR013352 Iron hydrogenase, subset E4O04_06530 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding E4O04_06530 IPR009016 Iron hydrogenase E4O04_06535 IPR028345 Aminoglycoside 3-N-acetyltransferase-like E4O04_06535 IPR006340 Protein of unknown function DUF436 E4O04_06540 IPR036676 PurM-like, C-terminal domain superfamily E4O04_06540 IPR010074 Phosphoribosylformylglycinamidine subunit PurL E4O04_06540 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain E4O04_06540 IPR010918 PurM-like, C-terminal domain E4O04_06540 IPR016188 PurM-like, N-terminal domain E4O04_06540 IPR036921 PurM-like, N-terminal domain superfamily E4O04_06555 IPR002641 Patatin-like phospholipase domain E4O04_06555 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase E4O04_06575 IPR023671 ATPase RavA E4O04_06575 IPR011704 ATPase, dynein-related, AAA domain E4O04_06575 IPR003593 AAA+ ATPase domain E4O04_06575 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06575 IPR041538 ATPase RavA-like, AAA lid domain E4O04_06575 IPR022547 ATPase, RavA, C-terminal E4O04_06585 IPR008912 Uncharacterised protein family CoxE-like E4O04_06585 IPR023481 Uncharacterised protein family ViaA E4O04_06585 IPR002035 von Willebrand factor, type A E4O04_06585 IPR036465 von Willebrand factor A-like domain superfamily E4O04_06605 IPR033479 Double Cache domain 1 E4O04_06605 IPR029151 Periplasmic sensor-like domain superfamily E4O04_06605 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_06605 IPR003660 HAMP domain E4O04_06620 IPR005118 Transcription-repair-coupling factor, C-terminal domain E4O04_06620 IPR037235 TRCF-like, C-terminal domain E4O04_06620 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06620 IPR004576 Transcription-repair coupling factor E4O04_06620 IPR001650 Helicase, C-terminal E4O04_06620 IPR041471 UvrB, interaction domain E4O04_06620 IPR011545 DEAD/DEAH box helicase domain E4O04_06620 IPR003711 CarD-like/TRCF domain E4O04_06620 IPR036101 CarD-like/TRCF domain superfamily E4O04_06620 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_06625 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06625 IPR015856 ABC transporter, CbiO/EcfA subunit E4O04_06625 IPR017871 ABC transporter, conserved site E4O04_06625 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 E4O04_06625 IPR003593 AAA+ ATPase domain E4O04_06625 IPR003439 ABC transporter-like E4O04_06645 IPR002510 Metalloprotease TldD/PmbA E4O04_06645 IPR035068 Metalloprotease TldD/PmbA, N-terminal E4O04_06645 IPR036059 Metalloprotease TldD/PmbA superfamily E4O04_06650 IPR036059 Metalloprotease TldD/PmbA superfamily E4O04_06650 IPR025502 TldD E4O04_06650 IPR002510 Metalloprotease TldD/PmbA E4O04_06650 IPR035068 Metalloprotease TldD/PmbA, N-terminal E4O04_06655 IPR002114 Phosphotransferase system, HPr serine phosphorylation site E4O04_06655 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site E4O04_06655 IPR000032 Phosphocarrier protein HPr-like E4O04_06655 IPR035895 HPr-like superfamily E4O04_06660 IPR003755 HPr(Ser) kinase/phosphorylase E4O04_06660 IPR011104 HPr kinase/phosphorylase, C-terminal E4O04_06660 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal E4O04_06660 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily E4O04_06665 IPR002559 Transposase, IS4-like E4O04_06665 IPR032806 H repeat-associated protein, N-terminal E4O04_06675 IPR038765 Papain-like cysteine peptidase superfamily E4O04_06675 IPR018392 LysM domain E4O04_06675 IPR036779 LysM domain superfamily E4O04_06675 IPR000064 Endopeptidase, NLPC/P60 domain E4O04_06695 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06695 IPR003395 RecF/RecN/SMC, N-terminal E4O04_06695 IPR004604 DNA recombination/repair protein RecN E4O04_06710 IPR020826 Transketolase binding site E4O04_06710 IPR005478 Transketolase, bacterial-like E4O04_06710 IPR005475 Transketolase-like, pyrimidine-binding domain E4O04_06710 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E4O04_06710 IPR005474 Transketolase, N-terminal E4O04_06710 IPR033247 Transketolase family E4O04_06710 IPR029061 Thiamin diphosphate-binding fold E4O04_06715 IPR025502 TldD E4O04_06715 IPR036059 Metalloprotease TldD/PmbA superfamily E4O04_06715 IPR035068 Metalloprotease TldD/PmbA, N-terminal E4O04_06715 IPR002510 Metalloprotease TldD/PmbA E4O04_06725 IPR039421 Type I protein exporter E4O04_06725 IPR005074 Peptidase C39, bacteriocin processing E4O04_06725 IPR003593 AAA+ ATPase domain E4O04_06725 IPR033839 Lacticin 481 processing peptidase E4O04_06725 IPR017871 ABC transporter, conserved site E4O04_06725 IPR003439 ABC transporter-like E4O04_06725 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_06725 IPR011527 ABC transporter type 1, transmembrane domain E4O04_06725 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06730 IPR033186 Helicase HerA-like C-terminal E4O04_06730 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_06740 IPR001460 Penicillin-binding protein, transpeptidase E4O04_06740 IPR012338 Beta-lactamase/transpeptidase-like E4O04_06740 IPR005311 Penicillin-binding protein, dimerisation domain E4O04_06740 IPR036138 Penicillin-binding protein, dimerisation domain superfamily E4O04_06770 IPR015796 Impact family, bacterial/archaeal E4O04_06770 IPR023582 Impact family E4O04_06770 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal E4O04_06770 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_06770 IPR035647 EF-G domain III/V-like E4O04_06770 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site E4O04_06770 IPR036956 Impact, N-terminal domain superfamily E4O04_06770 IPR001498 Impact, N-terminal E4O04_06795 IPR003796 Ribonucleotide reductase regulator NrdR-like E4O04_06795 IPR005144 ATP-cone domain E4O04_06805 IPR010201 HflK E4O04_06805 IPR036013 Band 7/SPFH domain superfamily E4O04_06805 IPR001107 Band 7 domain E4O04_06810 IPR036013 Band 7/SPFH domain superfamily E4O04_06810 IPR010200 HflC E4O04_06810 IPR001107 Band 7 domain E4O04_06820 IPR004299 Membrane bound O-acyl transferase, MBOAT E4O04_06820 IPR028362 Alginate O-acetyltransferase AlgI E4O04_06820 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB E4O04_06830 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_06830 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_06830 IPR013750 GHMP kinase, C-terminal domain E4O04_06830 IPR036554 GHMP kinase, C-terminal domain superfamily E4O04_06830 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase E4O04_06830 IPR006204 GHMP kinase N-terminal domain E4O04_06835 IPR007170 Stage V sporulation protein G E4O04_06835 IPR036751 Stage V sporulation protein G superfamily E4O04_06845 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal E4O04_06845 IPR029751 Ribosomal protein L25 E4O04_06845 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily E4O04_06845 IPR020057 Ribosomal protein L25, beta domain E4O04_06845 IPR037121 Ribosomal protein L25, C-terminal E4O04_06845 IPR001021 Ribosomal protein L25, long-form E4O04_06850 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal E4O04_06850 IPR012094 tRNA(Ile)-lysidine synthase E4O04_06850 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal E4O04_06850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_06850 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal E4O04_06855 IPR011990 Tetratricopeptide-like helical domain superfamily E4O04_06860 IPR001478 PDZ domain E4O04_06860 IPR041489 PDZ domain 6 E4O04_06860 IPR036034 PDZ superfamily E4O04_06860 IPR011782 Peptidase S1C, Do E4O04_06860 IPR009003 Peptidase S1, PA clan E4O04_06860 IPR001940 Peptidase S1C E4O04_06880 IPR002694 Zinc finger, CHC2-type E4O04_06880 IPR006171 TOPRIM domain E4O04_06880 IPR034151 Bacterial DnaG primase, TOPRIM domain E4O04_06880 IPR030846 DNA primase DnaG, bacteria E4O04_06880 IPR013264 DNA primase, catalytic core, N-terminal E4O04_06880 IPR006295 DNA primase, DnaG E4O04_06880 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily E4O04_06880 IPR036977 DNA Primase, CHC2-type zinc finger E4O04_06885 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_06885 IPR028630 RNA polymerase sigma factor RpoD E4O04_06885 IPR012760 RNA polymerase sigma factor RpoD, C-terminal E4O04_06885 IPR013324 RNA polymerase sigma factor, region 3/4-like E4O04_06885 IPR013325 RNA polymerase sigma factor, region 2 E4O04_06885 IPR007630 RNA polymerase sigma-70 region 4 E4O04_06885 IPR007127 RNA polymerase sigma factor 70, region 1.1 E4O04_06885 IPR007627 RNA polymerase sigma-70 region 2 E4O04_06885 IPR009042 RNA polymerase sigma-70 region 1.2 E4O04_06885 IPR000943 RNA polymerase sigma-70 E4O04_06885 IPR014284 RNA polymerase sigma-70 like domain E4O04_06885 IPR007624 RNA polymerase sigma-70 region 3 E4O04_06905 IPR004753 Cell shape determining protein MreB E4O04_06920 IPR001460 Penicillin-binding protein, transpeptidase E4O04_06920 IPR012338 Beta-lactamase/transpeptidase-like E4O04_06920 IPR005311 Penicillin-binding protein, dimerisation domain E4O04_06920 IPR036138 Penicillin-binding protein, dimerisation domain superfamily E4O04_06920 IPR017790 Penicillin-binding protein 2 E4O04_06925 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB E4O04_06925 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA E4O04_06925 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site E4O04_06940 IPR018052 Aldose 1-epimerase, conserved site E4O04_06940 IPR013458 Aldose 1-epimerase, bacterial E4O04_06940 IPR015443 Aldose 1-epimerase E4O04_06940 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase E4O04_06940 IPR011013 Galactose mutarotase-like domain superfamily E4O04_06940 IPR014718 Glycoside hydrolase-type carbohydrate-binding E4O04_06950 IPR026033 Azaguanine-like transporters E4O04_06950 IPR006043 Xanthine/uracil/vitamin C permease E4O04_06955 IPR002303 Valine-tRNA ligase E4O04_06955 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain E4O04_06955 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm E4O04_06955 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily E4O04_06955 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E4O04_06955 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm E4O04_06955 IPR002300 Aminoacyl-tRNA synthetase, class Ia E4O04_06955 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding E4O04_06955 IPR033705 Valyl tRNA synthetase, anticodon-binding domain E4O04_06955 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E4O04_06955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_06990 IPR028349 Protein PafC E4O04_06990 IPR001034 DeoR-type HTH domain E4O04_06990 IPR013196 Helix-turn-helix, type 11 E4O04_06990 IPR026881 WYL domain E4O04_06990 IPR036390 Winged helix DNA-binding domain superfamily E4O04_06990 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_07035 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria E4O04_07035 IPR023885 4Fe4S-binding SPASM domain E4O04_07035 IPR013785 Aldolase-type TIM barrel E4O04_07035 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site E4O04_07035 IPR017200 Coenzyme PQQ synthesis protein E E4O04_07035 IPR006638 Elp3/MiaB/NifB E4O04_07035 IPR007197 Radical SAM E4O04_07040 IPR003439 ABC transporter-like E4O04_07040 IPR017871 ABC transporter, conserved site E4O04_07040 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07040 IPR039421 Type I protein exporter E4O04_07040 IPR011527 ABC transporter type 1, transmembrane domain E4O04_07040 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_07040 IPR003593 AAA+ ATPase domain E4O04_07050 IPR003593 AAA+ ATPase domain E4O04_07050 IPR003439 ABC transporter-like E4O04_07050 IPR017871 ABC transporter, conserved site E4O04_07050 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07060 IPR018060 DNA binding HTH domain, AraC-type E4O04_07060 IPR020449 Transcription regulator HTH, AraC- type E4O04_07060 IPR018062 HTH domain AraC-type, conserved site E4O04_07060 IPR037923 Transcription regulator HTH-like E4O04_07060 IPR009057 Homeobox-like domain superfamily E4O04_07060 IPR003313 AraC-type arabinose-binding/dimerisation domain E4O04_07095 IPR003439 ABC transporter-like E4O04_07095 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07095 IPR003593 AAA+ ATPase domain E4O04_07100 IPR041471 UvrB, interaction domain E4O04_07100 IPR024759 UvrB, YAD/RRR-motif-containing domain E4O04_07100 IPR006935 Helicase/UvrB, N-terminal E4O04_07100 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_07100 IPR001650 Helicase, C-terminal E4O04_07100 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07100 IPR001943 UVR domain E4O04_07100 IPR036876 UVR domain superfamily E4O04_07100 IPR004807 UvrABC system, subunit B E4O04_07105 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase E4O04_07105 IPR017953 Carbohydrate kinase, predicted, conserved site E4O04_07105 IPR029056 Ribokinase-like E4O04_07105 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr E4O04_07105 IPR004443 YjeF N-terminal domain E4O04_07105 IPR036652 YjeF N-terminal domain superfamily E4O04_07110 IPR012340 Nucleic acid-binding, OB-fold E4O04_07110 IPR001900 Ribonuclease II/R E4O04_07135 IPR001980 Phosphopantetheine adenylyltransferase E4O04_07135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_07135 IPR004821 Cytidyltransferase-like domain E4O04_07150 IPR002842 V-type ATPase subunit E E4O04_07150 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily E4O04_07155 IPR011991 ArsR-like helix-turn-helix domain E4O04_07155 IPR018334 ArsR-type transcription regulator, HTH motif E4O04_07155 IPR036390 Winged helix DNA-binding domain superfamily E4O04_07155 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_07155 IPR001845 HTH ArsR-type DNA-binding domain E4O04_07160 IPR001757 P-type ATPase E4O04_07160 IPR027256 P-type ATPase, subfamily IB E4O04_07160 IPR036163 Heavy metal-associated domain superfamily E4O04_07160 IPR023298 P-type ATPase, transmembrane domain superfamily E4O04_07160 IPR018303 P-type ATPase, phosphorylation site E4O04_07160 IPR023214 HAD superfamily E4O04_07160 IPR036412 HAD-like superfamily E4O04_07160 IPR023299 P-type ATPase, cytoplasmic domain N E4O04_07160 IPR008250 P-type ATPase, A domain superfamily E4O04_07160 IPR006121 Heavy metal-associated domain, HMA E4O04_07160 IPR017969 Heavy-metal-associated, conserved site E4O04_07175 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E4O04_07175 IPR002942 RNA-binding S4 domain E4O04_07175 IPR006145 Pseudouridine synthase, RsuA/RluA E4O04_07175 IPR006225 Pseudouridine synthase, RluC/RluD E4O04_07175 IPR036986 RNA-binding S4 domain superfamily E4O04_07175 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_07190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_07190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_07190 IPR009051 Alpha-helical ferredoxin E4O04_07190 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC E4O04_07190 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain E4O04_07190 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily E4O04_07190 IPR026902 RnfC Barrel sandwich hybrid domain E4O04_07190 IPR019554 Soluble ligand binding domain E4O04_07195 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D E4O04_07195 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD E4O04_07225 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 E4O04_07225 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07225 IPR025501 ATP binding protein MinD E4O04_07235 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt E4O04_07240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_07240 IPR003694 NAD(+) synthetase E4O04_07240 IPR014445 Glutamine-dependent NAD(+) synthetase E4O04_07240 IPR041856 Glutamine-dependent NAD+ synthetase, C-terminal E4O04_07240 IPR036526 Carbon-nitrogen hydrolase superfamily E4O04_07240 IPR022310 NAD/GMP synthase E4O04_07240 IPR003010 Carbon-nitrogen hydrolase E4O04_07250 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily E4O04_07250 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07250 IPR032524 ABC transporter Uup, C-terminal E4O04_07250 IPR003439 ABC transporter-like E4O04_07250 IPR032781 ABC-transporter extension domain E4O04_07250 IPR003593 AAA+ ATPase domain E4O04_07250 IPR017871 ABC transporter, conserved site E4O04_07255 IPR003646 SH3-like domain, bacterial-type E4O04_07260 IPR029062 Class I glutamine amidotransferase-like E4O04_07260 IPR017926 Glutamine amidotransferase E4O04_07260 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ E4O04_07270 IPR003607 HD/PDEase domain E4O04_07270 IPR006674 HD domain E4O04_07295 IPR006153 Cation/H+ exchanger E4O04_07295 IPR038770 Sodium/solute symporter superfamily E4O04_07310 IPR040442 Pyruvate kinase-like domain superfamily E4O04_07310 IPR039556 ICL/PEPM domain E4O04_07310 IPR012649 Phosphonopyruvate hydrolase E4O04_07310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E4O04_07315 IPR017684 Phosphonopyruvate decarboxylase E4O04_07315 IPR029061 Thiamin diphosphate-binding fold E4O04_07315 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E4O04_07315 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E4O04_07320 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase E4O04_07320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_07320 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_07320 IPR012703 2-aminoethylphosphonate--pyruvate transaminase E4O04_07320 IPR000192 Aminotransferase class V domain E4O04_07320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_07325 IPR041682 AAA domain, group 14 E4O04_07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07325 IPR025420 Domain of unknown function DUF4143 E4O04_07340 IPR003593 AAA+ ATPase domain E4O04_07340 IPR003439 ABC transporter-like E4O04_07340 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07340 IPR029439 Wzt, C-terminal E4O04_07350 IPR023401 Ornithine cyclodeaminase, N-terminal E4O04_07350 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB E4O04_07350 IPR036291 NAD(P)-binding domain superfamily E4O04_07350 IPR007110 Immunoglobulin-like domain E4O04_07350 IPR003462 Ornithine cyclodeaminase/mu-crystallin E4O04_07360 IPR001173 Glycosyltransferase 2-like E4O04_07360 IPR029044 Nucleotide-diphospho-sugar transferases E4O04_07370 IPR014710 RmlC-like jelly roll fold E4O04_07370 IPR011051 RmlC-like cupin domain superfamily E4O04_07370 IPR008894 WxcM-like, C-terminal E4O04_07385 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase E4O04_07385 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_07385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_07385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_07400 IPR001173 Glycosyltransferase 2-like E4O04_07400 IPR002495 Glycosyl transferase, family 8 E4O04_07400 IPR029044 Nucleotide-diphospho-sugar transferases E4O04_07405 IPR002654 Glycosyl transferase, family 25 E4O04_07415 IPR001173 Glycosyltransferase 2-like E4O04_07415 IPR029044 Nucleotide-diphospho-sugar transferases E4O04_07425 IPR019998 Membrane insertase YidC E4O04_07425 IPR028055 Membrane insertase YidC/Oxa1, C-terminal E4O04_07425 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 E4O04_07435 IPR007554 CDP-glycerol glycerophosphotransferase E4O04_07440 IPR038221 YidC, periplasmic domain superfamily E4O04_07440 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 E4O04_07440 IPR038210 Membrane insertase YidC, periplasmic domain E4O04_07440 IPR019998 Membrane insertase YidC E4O04_07440 IPR028055 Membrane insertase YidC/Oxa1, C-terminal E4O04_07450 IPR001296 Glycosyl transferase, family 1 E4O04_07450 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain E4O04_07450 IPR011875 Alpha-maltose-1-phosphate synthase E4O04_07455 IPR001509 NAD-dependent epimerase/dehydratase E4O04_07455 IPR036291 NAD(P)-binding domain superfamily E4O04_07460 IPR029044 Nucleotide-diphospho-sugar transferases E4O04_07460 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form E4O04_07460 IPR005835 Nucleotidyl transferase domain E4O04_07465 IPR016040 NAD(P)-binding domain E4O04_07465 IPR036291 NAD(P)-binding domain superfamily E4O04_07465 IPR005888 dTDP-glucose 4,6-dehydratase E4O04_07470 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_07470 IPR036621 Anticodon-binding domain superfamily E4O04_07470 IPR015807 Histidine-tRNA ligase E4O04_07470 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain E4O04_07470 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit E4O04_07475 IPR013123 RNA 2-O ribose methyltransferase, substrate binding E4O04_07475 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E4O04_07475 IPR001537 tRNA/rRNA methyltransferase, SpoU type E4O04_07475 IPR029064 50S ribosomal protein L30e-like E4O04_07475 IPR029028 Alpha/beta knot methyltransferases E4O04_07475 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB E4O04_07475 IPR004441 RNA methyltransferase TrmH family E4O04_07480 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain E4O04_07480 IPR022712 Beta-Casp domain E4O04_07480 IPR001279 Metallo-beta-lactamase E4O04_07480 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E4O04_07495 IPR018022 IPP transferase E4O04_07495 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07495 IPR039657 Dimethylallyltransferase E4O04_07500 IPR003593 AAA+ ATPase domain E4O04_07500 IPR011527 ABC transporter type 1, transmembrane domain E4O04_07500 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_07500 IPR003439 ABC transporter-like E4O04_07500 IPR011917 ABC transporter, lipid A export, MsbA E4O04_07500 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07500 IPR039421 Type I protein exporter E4O04_07500 IPR017871 ABC transporter, conserved site E4O04_07505 IPR003593 AAA+ ATPase domain E4O04_07505 IPR011527 ABC transporter type 1, transmembrane domain E4O04_07505 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_07505 IPR003439 ABC transporter-like E4O04_07505 IPR017871 ABC transporter, conserved site E4O04_07505 IPR011917 ABC transporter, lipid A export, MsbA E4O04_07505 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07505 IPR039421 Type I protein exporter E4O04_07510 IPR004391 Glutamate racemase E4O04_07510 IPR018187 Asp/Glu racemase, active site 1 E4O04_07510 IPR015942 Asp/Glu/hydantoin racemase E4O04_07510 IPR001920 Asp/Glu racemase E4O04_07515 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain E4O04_07515 IPR012340 Nucleic acid-binding, OB-fold E4O04_07515 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07515 IPR004881 Ribosome biogenesis GTPase RsgA E4O04_07515 IPR010914 RsgA GTPase domain E4O04_07515 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal E4O04_07520 IPR036063 Smr domain superfamily E4O04_07520 IPR002625 Smr domain E4O04_07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07520 IPR007696 DNA mismatch repair protein MutS, core E4O04_07520 IPR036187 DNA mismatch repair protein MutS, core domain superfamily E4O04_07520 IPR000432 DNA mismatch repair protein MutS, C-terminal E4O04_07520 IPR005747 Endonuclease MutS2 E4O04_07530 IPR011055 Duplicated hybrid motif E4O04_07530 IPR039672 Lactose permease-like E4O04_07530 IPR036259 MFS transporter superfamily E4O04_07530 IPR001927 Sodium:galactoside symporter E4O04_07530 IPR018043 Sodium:galactoside symporter, conserved site E4O04_07530 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 E4O04_07540 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_07540 IPR039420 Transcriptional regulatory protein WalR-like E4O04_07540 IPR001789 Signal transduction response regulator, receiver domain E4O04_07540 IPR001867 OmpR/PhoB-type DNA-binding domain E4O04_07540 IPR011006 CheY-like superfamily E4O04_07540 IPR016032 Signal transduction response regulator, C-terminal effector E4O04_07545 IPR013783 Immunoglobulin-like fold E4O04_07545 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily E4O04_07545 IPR011110 Two component regulator propeller E4O04_07545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E4O04_07545 IPR001789 Signal transduction response regulator, receiver domain E4O04_07545 IPR018062 HTH domain AraC-type, conserved site E4O04_07545 IPR011123 Two component regulator three Y E4O04_07545 IPR009057 Homeobox-like domain superfamily E4O04_07545 IPR015943 WD40/YVTN repeat-like-containing domain superfamily E4O04_07545 IPR011006 CheY-like superfamily E4O04_07545 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_07545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_07545 IPR005467 Histidine kinase domain E4O04_07545 IPR018060 DNA binding HTH domain, AraC-type E4O04_07545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E4O04_07545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E4O04_07555 IPR003593 AAA+ ATPase domain E4O04_07555 IPR003439 ABC transporter-like E4O04_07555 IPR017871 ABC transporter, conserved site E4O04_07555 IPR015854 ABC transporter, lipoprotein release, LolD E4O04_07555 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07575 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like E4O04_07580 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like E4O04_07600 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily E4O04_07600 IPR023535 Threonylcarbamoyl-AMP synthase E4O04_07600 IPR006070 YrdC-like domain E4O04_07610 IPR020081 SsrA-binding protein, conserved site E4O04_07610 IPR000037 SsrA-binding protein E4O04_07610 IPR023620 Small protein B E4O04_07615 IPR019757 Peptidase S26A, signal peptidase I, lysine active site E4O04_07615 IPR019758 Peptidase S26A, signal peptidase I, conserved site E4O04_07615 IPR036286 LexA/Signal peptidase-like superfamily E4O04_07615 IPR019533 Peptidase S26 E4O04_07615 IPR019756 Peptidase S26A, signal peptidase I, serine active site E4O04_07615 IPR000223 Peptidase S26A, signal peptidase I E4O04_07620 IPR034505 Anaerobic coproporphyrinogen-III oxidase E4O04_07620 IPR006638 Elp3/MiaB/NifB E4O04_07620 IPR010723 HemN, C-terminal E4O04_07620 IPR004559 Heme chaperone HemW-like E4O04_07620 IPR007197 Radical SAM E4O04_07620 IPR023404 Radical SAM, alpha/beta horseshoe E4O04_07625 IPR003660 HAMP domain E4O04_07625 IPR003607 HD/PDEase domain E4O04_07625 IPR006674 HD domain E4O04_07625 IPR037522 HD-GYP domain E4O04_07635 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07635 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE E4O04_07650 IPR040026 Flagellar hook-associated protein 2 E4O04_07650 IPR010809 Flagellar hook-associated protein 2, C-terminal E4O04_07650 IPR003481 Flagellar hook-associated protein 2, N-terminal E4O04_07660 IPR001029 Flagellin, D0/D1 domain E4O04_07660 IPR001492 Flagellin E4O04_07665 IPR001492 Flagellin E4O04_07665 IPR001029 Flagellin, D0/D1 domain E4O04_07690 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal E4O04_07690 IPR036005 Creatinase/aminopeptidase-like E4O04_07690 IPR000587 Creatinase, N-terminal E4O04_07690 IPR000994 Peptidase M24 E4O04_07690 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site E4O04_07700 IPR017856 Integrase-like, N-terminal E4O04_07700 IPR002876 Transcriptional regulator TACO1-like E4O04_07700 IPR026564 Transcriptional regulator TACO1-like, domain 3 E4O04_07700 IPR029072 YebC-like E4O04_07705 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I E4O04_07705 IPR036291 NAD(P)-binding domain superfamily E4O04_07705 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain E4O04_07705 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family E4O04_07705 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain E4O04_07705 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site E4O04_07720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E4O04_07720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E4O04_07720 IPR036641 HPT domain superfamily E4O04_07720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_07720 IPR005467 Histidine kinase domain E4O04_07720 IPR035891 CheY-binding domain of CheA E4O04_07720 IPR002545 CheW-like domain E4O04_07720 IPR036061 CheW-like domain superfamily E4O04_07720 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding E4O04_07720 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_07720 IPR004105 Histidine kinase CheA-like, homodimeric domain E4O04_07725 IPR039315 Chemotaxis protein CheW E4O04_07725 IPR036061 CheW-like domain superfamily E4O04_07725 IPR002545 CheW-like domain E4O04_07735 IPR011006 CheY-like superfamily E4O04_07735 IPR001789 Signal transduction response regulator, receiver domain E4O04_07745 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07745 IPR003395 RecF/RecN/SMC, N-terminal E4O04_07745 IPR024704 Structural maintenance of chromosomes protein E4O04_07745 IPR010935 SMCs flexible hinge E4O04_07745 IPR036277 SMCs flexible hinge superfamily E4O04_07745 IPR011890 Structural maintenance of chromosomes protein, prokaryotic E4O04_07755 IPR011990 Tetratricopeptide-like helical domain superfamily E4O04_07755 IPR039565 Outer membrane lipoprotein BamD-like E4O04_07785 IPR016187 C-type lectin fold E4O04_07785 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_07785 IPR005532 Sulfatase-modifying factor enzyme E4O04_07795 IPR001789 Signal transduction response regulator, receiver domain E4O04_07795 IPR029787 Nucleotide cyclase E4O04_07795 IPR011006 CheY-like superfamily E4O04_07795 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_07800 IPR000362 Fumarate lyase family E4O04_07800 IPR004769 Adenylosuccinate lyase E4O04_07800 IPR008948 L-Aspartase-like E4O04_07800 IPR022761 Fumarate lyase, N-terminal E4O04_07800 IPR019468 Adenylosuccinate lyase C-terminal E4O04_07800 IPR024083 Fumarase/histidase, N-terminal E4O04_07800 IPR020557 Fumarate lyase, conserved site E4O04_07810 IPR008279 PEP-utilising enzyme, mobile domain E4O04_07810 IPR000121 PEP-utilising enzyme, C-terminal E4O04_07810 IPR013815 ATP-grasp fold, subdomain 1 E4O04_07810 IPR040442 Pyruvate kinase-like domain superfamily E4O04_07810 IPR018274 PEP-utilising enzyme, active site E4O04_07810 IPR036637 Phosphohistidine domain superfamily E4O04_07810 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding E4O04_07810 IPR010121 Pyruvate, phosphate dikinase E4O04_07810 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E4O04_07810 IPR023151 PEP-utilising enzyme, conserved site E4O04_07825 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07825 IPR041703 Transcription termination factor Rho, ATP binding domain E4O04_07825 IPR011112 Rho termination factor, N-terminal E4O04_07825 IPR011113 Rho termination factor, RNA-binding domain E4O04_07825 IPR004665 Transcription termination factor Rho E4O04_07825 IPR012340 Nucleic acid-binding, OB-fold E4O04_07825 IPR011129 Cold shock domain E4O04_07825 IPR003593 AAA+ ATPase domain E4O04_07825 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E4O04_07830 IPR042105 Ribosomal protein L31 superfamily E4O04_07830 IPR027491 Ribosomal protein L31 type A E4O04_07830 IPR002150 Ribosomal protein L31 E4O04_07830 IPR034704 L28p-like E4O04_07840 IPR004642 Serine dehydratase, alpha subunit E4O04_07840 IPR005130 Serine dehydratase-like, alpha subunit E4O04_07845 IPR005131 Serine dehydratase beta chain E4O04_07845 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit E4O04_07845 IPR029009 Allosteric substrate binding domain superfamily E4O04_07845 IPR002912 ACT domain E4O04_07855 IPR017871 ABC transporter, conserved site E4O04_07855 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07855 IPR015854 ABC transporter, lipoprotein release, LolD E4O04_07855 IPR003593 AAA+ ATPase domain E4O04_07855 IPR003439 ABC transporter-like E4O04_07855 IPR011924 Lipoprotein releasing system, ATP-binding protein E4O04_07860 IPR005217 Iron permease FTR1-like E4O04_07860 IPR004923 Iron permease FTR1/Fip1/EfeU E4O04_07860 IPR036259 MFS transporter superfamily E4O04_07865 IPR018470 Periplasmic metal-binding protein Tp34-type E4O04_07865 IPR038482 Periplasmic metal-binding protein tp34-type superfamily E4O04_07880 IPR003838 ABC transporter permease protein domain E4O04_07880 IPR005085 Carbohydrate binding module family 25 E4O04_07880 IPR025857 MacB-like periplasmic core domain E4O04_07885 IPR003593 AAA+ ATPase domain E4O04_07885 IPR003439 ABC transporter-like E4O04_07885 IPR017871 ABC transporter, conserved site E4O04_07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_07905 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain E4O04_07910 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily E4O04_07910 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain E4O04_07910 IPR020557 Fumarate lyase, conserved site E4O04_07910 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain E4O04_07910 IPR011167 Iron-dependent fumarate hydratase E4O04_07915 IPR016181 Acyl-CoA N-acyltransferase E4O04_07915 IPR005216 Citrate lyase ligase E4O04_07915 IPR013166 Citrate lyase ligase, C-terminal E4O04_07915 IPR004821 Cytidyltransferase-like domain E4O04_07915 IPR000182 GNAT domain E4O04_07915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_07920 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG E4O04_07920 IPR002736 Triphosphoribosyl-dephospho-CoA protein E4O04_07920 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4O04_07945 IPR029052 Metallo-dependent phosphatase-like E4O04_07945 IPR005235 Metallophosphoesterase, YmdB-like E4O04_07955 IPR008949 Isoprenoid synthase domain superfamily E4O04_07955 IPR000092 Polyprenyl synthetase E4O04_07955 IPR033749 Polyprenyl synthetase, conserved site E4O04_07965 IPR013840 NAD-dependent DNA ligase, N-terminal E4O04_07965 IPR010994 RuvA domain 2-like E4O04_07965 IPR004150 NAD-dependent DNA ligase, OB-fold E4O04_07965 IPR012340 Nucleic acid-binding, OB-fold E4O04_07965 IPR001679 NAD-dependent DNA ligase E4O04_07965 IPR013839 NAD-dependent DNA ligase, adenylation E4O04_07965 IPR018239 NAD-dependent DNA ligase, active site E4O04_07965 IPR036420 BRCT domain superfamily E4O04_07965 IPR001357 BRCT domain E4O04_07985 IPR005358 Putative zinc- or iron-chelating domain containing protein E4O04_08000 IPR003770 Endolytic murein transglycosylase E4O04_08020 IPR036397 Ribonuclease H superfamily E4O04_08020 IPR001352 Ribonuclease HII/HIII E4O04_08020 IPR024567 Ribonuclease HII/HIII domain E4O04_08020 IPR022898 Ribonuclease HII E4O04_08020 IPR012337 Ribonuclease H-like superfamily E4O04_08025 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily E4O04_08025 IPR004401 Nucleoid-associated protein YbaB/EbfC family E4O04_08030 IPR006171 TOPRIM domain E4O04_08030 IPR000093 DNA recombination protein RecR E4O04_08030 IPR023627 Recombination protein RecR E4O04_08030 IPR023628 Recombination protein RecR, C4-type zinc finger E4O04_08030 IPR015967 Recombination protein RecR, conserved site E4O04_08030 IPR034137 RecR, TOPRIM domain E4O04_08035 IPR022953 ATP-dependent 6-phosphofructokinase E4O04_08035 IPR000023 Phosphofructokinase domain E4O04_08035 IPR035966 Phosphofructokinase superfamily E4O04_08035 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB E4O04_08040 IPR030678 Peptide/nickel binding protein, MppA-type E4O04_08040 IPR039424 Solute-binding protein family 5 E4O04_08040 IPR023765 Solute-binding protein family 5, conserved site E4O04_08040 IPR000914 Solute-binding protein family 5 domain E4O04_08045 IPR035906 MetI-like superfamily E4O04_08045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_08050 IPR035906 MetI-like superfamily E4O04_08050 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E4O04_08050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E4O04_08055 IPR003593 AAA+ ATPase domain E4O04_08055 IPR003439 ABC transporter-like E4O04_08055 IPR017871 ABC transporter, conserved site E4O04_08055 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_08055 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08060 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E4O04_08060 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08060 IPR017871 ABC transporter, conserved site E4O04_08060 IPR003593 AAA+ ATPase domain E4O04_08060 IPR003439 ABC transporter-like E4O04_08065 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain E4O04_08065 IPR004562 Lipoyltransferase/lipoate-protein ligase E4O04_08065 IPR019491 Lipoate protein ligase, C-terminal E4O04_08070 IPR007197 Radical SAM E4O04_08070 IPR006638 Elp3/MiaB/NifB E4O04_08070 IPR013785 Aldolase-type TIM barrel E4O04_08070 IPR003698 Lipoyl synthase E4O04_08075 IPR013848 Methylthiotransferase, N-terminal E4O04_08075 IPR020612 Methylthiotransferase, conserved site E4O04_08075 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB E4O04_08075 IPR007197 Radical SAM E4O04_08075 IPR023404 Radical SAM, alpha/beta horseshoe E4O04_08075 IPR005839 Methylthiotransferase E4O04_08075 IPR002792 TRAM domain E4O04_08075 IPR038135 Methylthiotransferase, N-terminal domain superfamily E4O04_08075 IPR006638 Elp3/MiaB/NifB E4O04_08105 IPR019935 Conserved hypothetical protein CHP03546 E4O04_08110 IPR001296 Glycosyl transferase, family 1 E4O04_08110 IPR011835 Bacterial/plant glycogen synthase E4O04_08110 IPR013534 Starch synthase, catalytic domain E4O04_08125 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) E4O04_08125 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_08125 IPR004524 Aspartate-tRNA ligase, type 1 E4O04_08125 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb E4O04_08125 IPR004115 GAD-like domain superfamily E4O04_08125 IPR029351 GAD domain E4O04_08125 IPR012340 Nucleic acid-binding, OB-fold E4O04_08125 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type E4O04_08130 IPR024109 Tryptophan-tRNA ligase, bacterial-type E4O04_08130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_08130 IPR002306 Tryptophan-tRNA ligase E4O04_08130 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E4O04_08130 IPR002305 Aminoacyl-tRNA synthetase, class Ic E4O04_08135 IPR039315 Chemotaxis protein CheW E4O04_08135 IPR036061 CheW-like domain superfamily E4O04_08135 IPR002545 CheW-like domain E4O04_08145 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal E4O04_08145 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal E4O04_08145 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily E4O04_08145 IPR002504 NAD kinase E4O04_08150 IPR003593 AAA+ ATPase domain E4O04_08150 IPR032781 ABC-transporter extension domain E4O04_08150 IPR003439 ABC transporter-like E4O04_08150 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08155 IPR013352 Iron hydrogenase, subset E4O04_08155 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding E4O04_08155 IPR036991 Iron hydrogenase, small subunit superfamily E4O04_08155 IPR036010 2Fe-2S ferredoxin-like superfamily E4O04_08155 IPR004108 Iron hydrogenase, large subunit, C-terminal E4O04_08155 IPR009016 Iron hydrogenase E4O04_08155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_08155 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E4O04_08155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_08155 IPR003149 Iron hydrogenase, small subunit E4O04_08160 IPR009051 Alpha-helical ferredoxin E4O04_08160 IPR017701 Putative selenate reductase YgfK E4O04_08160 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_08160 IPR028261 Dihydroprymidine dehydrogenase domain II E4O04_08160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_08160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_08160 IPR023753 FAD/NAD(P)-binding domain E4O04_08165 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD E4O04_08165 IPR036074 CbiD superfamily E4O04_08170 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08170 IPR017871 ABC transporter, conserved site E4O04_08170 IPR003439 ABC transporter-like E4O04_08170 IPR003593 AAA+ ATPase domain E4O04_08185 IPR013572 Transcription regulator MAATS, C-terminal E4O04_08185 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E4O04_08185 IPR009057 Homeobox-like domain superfamily E4O04_08185 IPR001647 DNA-binding HTH domain, TetR-type E4O04_08185 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E4O04_08220 IPR029479 Nitroreductase E4O04_08220 IPR000415 Nitroreductase-like E4O04_08225 IPR020476 NUDIX hydrolase E4O04_08225 IPR023781 Nucleoside triphosphatase NudI E4O04_08225 IPR020084 NUDIX hydrolase, conserved site E4O04_08225 IPR015797 NUDIX hydrolase-like domain superfamily E4O04_08225 IPR000086 NUDIX hydrolase domain E4O04_08255 IPR000836 Phosphoribosyltransferase domain E4O04_08255 IPR029057 Phosphoribosyltransferase-like E4O04_08275 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O04_08275 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site E4O04_08275 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 E4O04_08275 IPR036291 NAD(P)-binding domain superfamily E4O04_08275 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E4O04_08300 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 E4O04_08300 IPR020581 Glycine cleavage system P protein E4O04_08300 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_08300 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_08300 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_08305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_08305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_08305 IPR020581 Glycine cleavage system P protein E4O04_08305 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_08305 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 E4O04_08310 IPR017453 Glycine cleavage system H-protein, subgroup E4O04_08310 IPR033753 Glycine cleavage system H-protein/Simiate E4O04_08310 IPR011053 Single hybrid motif E4O04_08310 IPR000089 Biotin/lipoyl attachment E4O04_08310 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site E4O04_08310 IPR002930 Glycine cleavage system H-protein E4O04_08315 IPR006223 Glycine cleavage system T protein E4O04_08315 IPR022903 Glycine cleavage system T protein, bacteria E4O04_08315 IPR028896 Aminomethyltransferase-like E4O04_08315 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain E4O04_08315 IPR006222 Aminomethyltransferase, folate-binding domain E4O04_08315 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal E4O04_08315 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 E4O04_08320 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site E4O04_08320 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4O04_08320 IPR006258 Dihydrolipoamide dehydrogenase E4O04_08320 IPR023753 FAD/NAD(P)-binding domain E4O04_08320 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_08320 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I E4O04_08320 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily E4O04_08330 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY E4O04_08330 IPR000771 Fructose-bisphosphate aldolase, class-II E4O04_08330 IPR013785 Aldolase-type TIM barrel E4O04_08330 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY E4O04_08335 IPR018485 Carbohydrate kinase, FGGY, C-terminal E4O04_08335 IPR018483 Carbohydrate kinase, FGGY, conserved site E4O04_08335 IPR005999 Glycerol kinase E4O04_08335 IPR000577 Carbohydrate kinase, FGGY E4O04_08335 IPR018484 Carbohydrate kinase, FGGY, N-terminal E4O04_08340 IPR003474 Gluconate transporter E4O04_08345 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O04_08345 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site E4O04_08345 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E4O04_08345 IPR036291 NAD(P)-binding domain superfamily E4O04_08350 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_08350 IPR001347 Sugar isomerase (SIS) E4O04_08350 IPR000281 Helix-turn-helix protein RpiR E4O04_08350 IPR009057 Homeobox-like domain superfamily E4O04_08350 IPR035472 RpiR-like, SIS domain E4O04_08360 IPR006472 Citrate lyase, alpha subunit E4O04_08360 IPR037171 NagB/RpiA transferase-like E4O04_08365 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E4O04_08365 IPR011206 Citrate lyase beta subunit-like E4O04_08365 IPR006475 Citrate lyase, beta subunit, bacteria E4O04_08365 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E4O04_08365 IPR040442 Pyruvate kinase-like domain superfamily E4O04_08370 IPR006495 Citrate lyase acyl carrier protein CitD E4O04_08370 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein E4O04_08375 IPR002562 3'-5' exonuclease domain E4O04_08375 IPR036397 Ribonuclease H superfamily E4O04_08375 IPR012337 Ribonuclease H-like superfamily E4O04_08375 IPR029060 PIN-like domain superfamily E4O04_08375 IPR008918 Helix-hairpin-helix motif, class 2 E4O04_08375 IPR002298 DNA polymerase A E4O04_08375 IPR013520 Exonuclease, RNase T/DNA polymerase III E4O04_08375 IPR020045 DNA polymerase I-like, H3TH domain E4O04_08375 IPR001098 DNA-directed DNA polymerase, family A, palm domain E4O04_08375 IPR019760 DNA-directed DNA polymerase, family A, conserved site E4O04_08375 IPR036279 5'-3' exonuclease, C-terminal domain superfamily E4O04_08375 IPR002421 5'-3' exonuclease, N-terminal E4O04_08375 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal E4O04_08375 IPR018320 DNA polymerase 1 E4O04_08380 IPR001977 Dephospho-CoA kinase E4O04_08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08390 IPR022893 Shikimate dehydrogenase family E4O04_08390 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal E4O04_08390 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase E4O04_08390 IPR041121 SDH, C-terminal E4O04_08390 IPR036291 NAD(P)-binding domain superfamily E4O04_08390 IPR011342 Shikimate dehydrogenase E4O04_08395 IPR037171 NagB/RpiA transferase-like E4O04_08395 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup E4O04_08395 IPR004788 Ribose 5-phosphate isomerase, type A E4O04_08405 IPR005543 PASTA domain E4O04_08410 IPR011034 Formyl transferase-like, C-terminal domain superfamily E4O04_08410 IPR036477 Formyl transferase, N-terminal domain superfamily E4O04_08410 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain E4O04_08410 IPR037022 Formyl transferase, C-terminal domain superfamily E4O04_08410 IPR005793 Formyl transferase, C-terminal E4O04_08410 IPR005794 Methionyl-tRNA formyltransferase E4O04_08410 IPR002376 Formyl transferase, N-terminal E4O04_08415 IPR023635 Peptide deformylase E4O04_08415 IPR036821 Peptide deformylase superfamily E4O04_08435 IPR003593 AAA+ ATPase domain E4O04_08435 IPR003439 ABC transporter-like E4O04_08435 IPR017871 ABC transporter, conserved site E4O04_08435 IPR015856 ABC transporter, CbiO/EcfA subunit E4O04_08435 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 E4O04_08435 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08440 IPR003784 BioY protein E4O04_08445 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08445 IPR017871 ABC transporter, conserved site E4O04_08445 IPR003593 AAA+ ATPase domain E4O04_08445 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_08445 IPR011527 ABC transporter type 1, transmembrane domain E4O04_08445 IPR003439 ABC transporter-like E4O04_08450 IPR003593 AAA+ ATPase domain E4O04_08450 IPR011527 ABC transporter type 1, transmembrane domain E4O04_08450 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_08450 IPR003439 ABC transporter-like E4O04_08450 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08450 IPR039421 Type I protein exporter E4O04_08455 IPR018631 AAA-ATPase-like domain E4O04_08455 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_08460 IPR042035 DEAH helicase, winged-helix domain E4O04_08460 IPR011709 Domain of unknown function DUF1605 E4O04_08460 IPR007502 Helicase-associated domain E4O04_08460 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_08460 IPR001650 Helicase, C-terminal E4O04_08460 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08460 IPR011545 DEAD/DEAH box helicase domain E4O04_08475 IPR035926 NusB-like superfamily E4O04_08475 IPR011605 NusB antitermination factor E4O04_08475 IPR006027 NusB/RsmB/TIM44 E4O04_08480 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type E4O04_08480 IPR027304 Trigger factor/SurA domain superfamily E4O04_08485 IPR012947 Threonyl/alanyl tRNA synthetase, SAD E4O04_08485 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily E4O04_08485 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria E4O04_08485 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal E4O04_08485 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain E4O04_08485 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily E4O04_08485 IPR002318 Alanine-tRNA ligase, class IIc E4O04_08490 IPR007693 DNA helicase, DnaB-like, N-terminal E4O04_08490 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily E4O04_08490 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08490 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal E4O04_08490 IPR007694 DNA helicase, DnaB-like, C-terminal E4O04_08490 IPR007692 DNA helicase, DnaB type E4O04_08520 IPR027619 Putative C-S lyase E4O04_08520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_08520 IPR004839 Aminotransferase, class I/classII E4O04_08520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_08520 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_08540 IPR005215 Trigger factor E4O04_08540 IPR008880 Trigger factor, C-terminal E4O04_08540 IPR037041 Trigger factor, C-terminal domain superfamily E4O04_08540 IPR008881 Trigger factor, ribosome-binding, bacterial E4O04_08540 IPR036611 Trigger factor ribosome-binding domain superfamily E4O04_08540 IPR027304 Trigger factor/SurA domain superfamily E4O04_08540 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E4O04_08545 IPR001907 ATP-dependent Clp protease proteolytic subunit E4O04_08545 IPR029045 ClpP/crotonase-like domain superfamily E4O04_08545 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA E4O04_08545 IPR033135 ClpP, histidine active site E4O04_08550 IPR003959 ATPase, AAA-type, core E4O04_08550 IPR003593 AAA+ ATPase domain E4O04_08550 IPR038366 Zinc finger, ClpX C4-type superfamily E4O04_08550 IPR010603 Zinc finger, ClpX C4-type E4O04_08550 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08550 IPR001270 ClpA/B family E4O04_08550 IPR004487 Clp protease, ATP-binding subunit ClpX E4O04_08550 IPR019489 Clp ATPase, C-terminal E4O04_08560 IPR036935 Ribosomal protein L9, N-terminal domain superfamily E4O04_08560 IPR020594 Ribosomal protein L9, bacteria/chloroplast E4O04_08560 IPR036791 Ribosomal protein L9, C-terminal domain superfamily E4O04_08560 IPR009027 Ribosomal protein L9/RNase H1, N-terminal E4O04_08560 IPR000244 Ribosomal protein L9 E4O04_08560 IPR020070 Ribosomal protein L9, N-terminal E4O04_08560 IPR020069 Ribosomal protein L9, C-terminal E4O04_08565 IPR001648 Ribosomal protein S18 E4O04_08565 IPR036870 Ribosomal protein S18 superfamily E4O04_08565 IPR018275 Ribosomal protein S18, conserved site E4O04_08570 IPR011344 Single-stranded DNA-binding protein E4O04_08570 IPR000424 Primosome PriB/single-strand DNA-binding E4O04_08570 IPR012340 Nucleic acid-binding, OB-fold E4O04_08575 IPR035980 Ribosomal protein S6 superfamily E4O04_08575 IPR020814 Ribosomal protein S6, plastid/chloroplast E4O04_08575 IPR020815 Ribosomal protein S6, conserved site E4O04_08575 IPR000529 Ribosomal protein S6 E4O04_08575 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 E4O04_08585 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family E4O04_08590 IPR002699 ATPase, V1 complex, subunit D E4O04_08595 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain E4O04_08595 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E4O04_08595 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08595 IPR022879 V-type ATP synthase regulatory subunit B/beta E4O04_08600 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension E4O04_08600 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily E4O04_08600 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site E4O04_08600 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain E4O04_08600 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E4O04_08600 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal E4O04_08600 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08600 IPR022878 V-type ATP synthase catalytic alpha chain E4O04_08605 IPR000836 Phosphoribosyltransferase domain E4O04_08605 IPR005764 Adenine phosphoribosyl transferase E4O04_08605 IPR029057 Phosphoribosyltransferase-like E4O04_08610 IPR001633 EAL domain E4O04_08610 IPR016132 Phytochrome chromophore attachment domain E4O04_08610 IPR013515 Phytochrome, central region E4O04_08610 IPR001294 Phytochrome E4O04_08610 IPR029787 Nucleotide cyclase E4O04_08610 IPR000160 GGDEF domain E4O04_08610 IPR029016 GAF-like domain superfamily E4O04_08610 IPR003018 GAF domain E4O04_08610 IPR035919 EAL domain superfamily E4O04_08615 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase E4O04_08615 IPR036968 Enolpyruvate transferase domain superfamily E4O04_08615 IPR001986 Enolpyruvate transferase domain E4O04_08615 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site E4O04_08615 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta E4O04_08620 IPR013026 Tetratricopeptide repeat-containing domain E4O04_08620 IPR011990 Tetratricopeptide-like helical domain superfamily E4O04_08620 IPR019734 Tetratricopeptide repeat E4O04_08630 IPR003593 AAA+ ATPase domain E4O04_08630 IPR003439 ABC transporter-like E4O04_08630 IPR017871 ABC transporter, conserved site E4O04_08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_08645 IPR009197 Microcystin LR degradation protein MlrC E4O04_08645 IPR010799 Microcystin LR degradation protein MlrC, C-terminal E4O04_08645 IPR015995 Microcystin LR degradation protein MlrC, N-terminal E4O04_08650 IPR013078 Histidine phosphatase superfamily, clade-1 E4O04_08650 IPR029033 Histidine phosphatase superfamily E4O04_08650 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site E4O04_08650 IPR005952 Phosphoglycerate mutase 1 E4O04_08675 IPR036653 CinA-like, C-terminal E4O04_08675 IPR001453 MoaB/Mog domain E4O04_08675 IPR036425 MoaB/Mog-like domain superfamily E4O04_08675 IPR008135 Competence-induced protein CinA E4O04_08675 IPR008136 CinA, C-terminal E4O04_08685 IPR036526 Carbon-nitrogen hydrolase superfamily E4O04_08685 IPR003010 Carbon-nitrogen hydrolase E4O04_08685 IPR004563 Apolipoprotein N-acyltransferase E4O04_08690 IPR005685 Integration host factor, beta subunit E4O04_08690 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily E4O04_08690 IPR020816 Histone-like DNA-binding protein, conserved site E4O04_08690 IPR000119 Histone-like DNA-binding protein E4O04_08695 IPR002583 Ribosomal protein S20 E4O04_08695 IPR036510 Ribosomal protein S20 superfamily E4O04_08705 IPR016369 Flagellar filament outer layer protein FlaA, Spirochaetes E4O04_08705 IPR006714 Flagellar filament outer layer protein FlaA E4O04_08715 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain E4O04_08720 IPR001576 Phosphoglycerate kinase E4O04_08720 IPR015824 Phosphoglycerate kinase, N-terminal E4O04_08720 IPR036043 Phosphoglycerate kinase superfamily E4O04_08740 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal E4O04_08740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_08740 IPR025777 GMP synthetase ATP pyrophosphatase domain E4O04_08740 IPR022955 GMP synthase E4O04_08740 IPR004739 GMP synthase, glutamine amidotransferase E4O04_08740 IPR029062 Class I glutamine amidotransferase-like E4O04_08740 IPR017926 Glutamine amidotransferase E4O04_08740 IPR001674 GMP synthase, C-terminal E4O04_08755 IPR010206 Poly(A) polymerase I E4O04_08755 IPR002646 Poly A polymerase, head domain E4O04_08755 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain E4O04_08755 IPR025866 Polymerase A arginine-rich C-terminal domain E4O04_08780 IPR023230 Glycoside hydrolase, family 2, conserved site E4O04_08780 IPR006101 Glycoside hydrolase, family 2 E4O04_08780 IPR040605 Glycoside hydrolase family 2, domain 5 E4O04_08780 IPR008979 Galactose-binding-like domain superfamily E4O04_08780 IPR032311 Domain of unknown function DUF4982 E4O04_08780 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily E4O04_08780 IPR023232 Glycoside hydrolase, family 2, active site E4O04_08780 IPR006103 Glycoside hydrolase family 2, catalytic domain E4O04_08780 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich E4O04_08780 IPR006104 Glycosyl hydrolases family 2, sugar binding domain E4O04_08780 IPR017853 Glycoside hydrolase superfamily E4O04_08780 IPR013783 Immunoglobulin-like fold E4O04_08780 IPR008964 Invasin/intimin cell-adhesion fragments E4O04_08785 IPR018253 DnaJ domain, conserved site E4O04_08785 IPR008971 HSP40/DnaJ peptide-binding E4O04_08785 IPR001305 Heat shock protein DnaJ, cysteine-rich domain E4O04_08785 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily E4O04_08785 IPR036869 Chaperone J-domain superfamily E4O04_08785 IPR002939 Chaperone DnaJ, C-terminal E4O04_08785 IPR001623 DnaJ domain E4O04_08785 IPR012724 Chaperone DnaJ E4O04_08790 IPR001714 Peptidase M24, methionine aminopeptidase E4O04_08790 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 E4O04_08790 IPR000994 Peptidase M24 E4O04_08790 IPR036005 Creatinase/aminopeptidase-like E4O04_08795 IPR036691 Endonuclease/exonuclease/phosphatase superfamily E4O04_08795 IPR020847 AP endonuclease 1, binding site E4O04_08795 IPR004808 AP endonuclease 1 E4O04_08795 IPR005135 Endonuclease/exonuclease/phosphatase E4O04_08795 IPR020848 AP endonuclease 1, conserved site E4O04_08805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_08805 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_08815 IPR007340 Opacity-associated protein A E4O04_08815 IPR011055 Duplicated hybrid motif E4O04_08815 IPR016047 Peptidase M23 E4O04_08825 IPR012338 Beta-lactamase/transpeptidase-like E4O04_08825 IPR001264 Glycosyl transferase, family 51 E4O04_08825 IPR023346 Lysozyme-like domain superfamily E4O04_08825 IPR036950 Penicillin binding protein transglycosylase domain E4O04_08825 IPR031376 Penicillin-binding protein, OB-like domain E4O04_08825 IPR001460 Penicillin-binding protein, transpeptidase E4O04_08835 IPR020845 AMP-binding, conserved site E4O04_08835 IPR000873 AMP-dependent synthetase/ligase E4O04_08835 IPR042099 AMP-dependent synthetase-like superfamily E4O04_08945 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_08945 IPR002941 DNA methylase N-4/N-6 E4O04_08945 IPR001091 Restriction/modification DNA-methylase E4O04_08945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_09060 IPR014047 Chromate transporter, long chain E4O04_09060 IPR003370 Chromate transporter E4O04_09065 IPR014047 Chromate transporter, long chain E4O04_09065 IPR003370 Chromate transporter E4O04_09070 IPR004394 Protein Iojap/ribosomal silencing factor RsfS E4O04_09080 IPR004821 Cytidyltransferase-like domain E4O04_09080 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase E4O04_09080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_09085 IPR006073 GTP binding domain E4O04_09085 IPR031167 OBG-type guanine nucleotide-binding (G) domain E4O04_09085 IPR035101 GTP-binding protein, Obg-type E4O04_09085 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09085 IPR036726 GTP1/OBG domain superfamily E4O04_09085 IPR006169 GTP1/OBG domain E4O04_09085 IPR006074 GTP1/OBG, conserved site E4O04_09085 IPR014100 GTP-binding protein Obg/CgtA E4O04_09090 IPR001684 Ribosomal protein L27 E4O04_09090 IPR018261 Ribosomal protein L27, conserved site E4O04_09100 IPR036164 L21-like superfamily E4O04_09100 IPR018258 Ribosomal protein L21, conserved site E4O04_09100 IPR028909 Ribosomal protein L21-like E4O04_09100 IPR001787 Ribosomal protein L21 E4O04_09105 IPR007391 Vancomycin resistance VanW E4O04_09115 IPR016040 NAD(P)-binding domain E4O04_09115 IPR036291 NAD(P)-binding domain superfamily E4O04_09115 IPR005886 UDP-glucose 4-epimerase E4O04_09120 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain E4O04_09120 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily E4O04_09120 IPR004793 Desulfoferrodoxin E4O04_09120 IPR038094 Desulforodoxin domain superfamily E4O04_09120 IPR004462 Desulforodoxin domain E4O04_09155 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site E4O04_09155 IPR029033 Histidine phosphatase superfamily E4O04_09155 IPR013078 Histidine phosphatase superfamily, clade-1 E4O04_09170 IPR036950 Penicillin binding protein transglycosylase domain E4O04_09170 IPR023346 Lysozyme-like domain superfamily E4O04_09170 IPR001264 Glycosyl transferase, family 51 E4O04_09170 IPR011812 Biosynthetic peptidoglycan transglycosylase E4O04_09175 IPR023576 UbiE/COQ5 methyltransferase, conserved site E4O04_09175 IPR004033 UbiE/COQ5 methyltransferase E4O04_09175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_09180 IPR002559 Transposase, IS4-like E4O04_09180 IPR008490 Transposase InsH, N-terminal E4O04_09230 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type E4O04_09230 IPR014347 Tautomerase/MIF superfamily E4O04_09230 IPR004370 4-oxalocrotonate tautomerase E4O04_09380 IPR010998 Integrase/recombinase, N-terminal E4O04_09380 IPR011946 Integrase, integron-type E4O04_09380 IPR002104 Integrase, catalytic domain E4O04_09380 IPR004107 Integrase, SAM-like, N-terminal E4O04_09380 IPR013762 Integrase-like, catalytic domain superfamily E4O04_09380 IPR011010 DNA breaking-rejoining enzyme, catalytic core E4O04_09405 IPR017871 ABC transporter, conserved site E4O04_09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09405 IPR003439 ABC transporter-like E4O04_09405 IPR015854 ABC transporter, lipoprotein release, LolD E4O04_09405 IPR003593 AAA+ ATPase domain E4O04_09415 IPR013785 Aldolase-type TIM barrel E4O04_09415 IPR013483 Molybdenum cofactor biosynthesis protein A E4O04_09415 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site E4O04_09415 IPR010505 Molybdenum cofactor synthesis C-terminal E4O04_09415 IPR007197 Radical SAM E4O04_09415 IPR006638 Elp3/MiaB/NifB E4O04_09455 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial E4O04_09455 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 E4O04_09455 IPR012340 Nucleic acid-binding, OB-fold E4O04_09455 IPR000085 Bacterial DNA recombination protein RuvA E4O04_09455 IPR010994 RuvA domain 2-like E4O04_09460 IPR012337 Ribonuclease H-like superfamily E4O04_09460 IPR002176 Crossover junction endodeoxyribonuclease RuvC E4O04_09460 IPR036397 Ribonuclease H superfamily E4O04_09465 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like E4O04_09465 IPR011765 Peptidase M16, N-terminal E4O04_09465 IPR007863 Peptidase M16, C-terminal E4O04_09465 IPR013578 Peptidase M16C associated E4O04_09470 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_09470 IPR003593 AAA+ ATPase domain E4O04_09470 IPR039421 Type I protein exporter E4O04_09470 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E4O04_09470 IPR005074 Peptidase C39, bacteriocin processing E4O04_09470 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09470 IPR003439 ABC transporter-like E4O04_09470 IPR011527 ABC transporter type 1, transmembrane domain E4O04_09510 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E4O04_09510 IPR006700 Ribosomal RNA small subunit methyltransferase E E4O04_09510 IPR015947 PUA-like superfamily E4O04_09510 IPR029028 Alpha/beta knot methyltransferases E4O04_09515 IPR036034 PDZ superfamily E4O04_09515 IPR004447 C-terminal-processing peptidase S41A E4O04_09515 IPR005151 Tail specific protease E4O04_09515 IPR029045 ClpP/crotonase-like domain superfamily E4O04_09515 IPR001478 PDZ domain E4O04_09525 IPR032781 ABC-transporter extension domain E4O04_09525 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09525 IPR022374 Energy-dependent translational throttle protein EttA E4O04_09525 IPR017871 ABC transporter, conserved site E4O04_09525 IPR003593 AAA+ ATPase domain E4O04_09525 IPR003439 ABC transporter-like E4O04_09560 IPR017853 Glycoside hydrolase superfamily E4O04_09560 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site E4O04_09560 IPR018120 Glycoside hydrolase family 1, active site E4O04_09560 IPR001360 Glycoside hydrolase family 1 E4O04_09560 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase E4O04_09575 IPR023404 Radical SAM, alpha/beta horseshoe E4O04_09575 IPR007197 Radical SAM E4O04_09575 IPR038135 Methylthiotransferase, N-terminal domain superfamily E4O04_09575 IPR006638 Elp3/MiaB/NifB E4O04_09575 IPR005839 Methylthiotransferase E4O04_09575 IPR020612 Methylthiotransferase, conserved site E4O04_09575 IPR013848 Methylthiotransferase, N-terminal E4O04_09575 IPR006467 MiaB-like tRNA modifying enzyme E4O04_09590 IPR004685 Branched-chain amino acid transport system II carrier protein E4O04_09600 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 E4O04_09600 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 E4O04_09600 IPR006171 TOPRIM domain E4O04_09600 IPR000380 DNA topoisomerase, type IA E4O04_09600 IPR023405 DNA topoisomerase, type IA, core domain E4O04_09600 IPR003602 DNA topoisomerase, type IA, DNA-binding domain E4O04_09600 IPR005738 DNA topoisomerase III E4O04_09600 IPR013497 DNA topoisomerase, type IA, central E4O04_09600 IPR034144 DNA topoisomerase 3-like, TOPRIM domain E4O04_09600 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 E4O04_09600 IPR003601 DNA topoisomerase, type IA, domain 2 E4O04_09600 IPR023406 DNA topoisomerase, type IA, active site E4O04_09610 IPR003688 Type IV secretion system protein TraG/VirD4 E4O04_09610 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09620 IPR001482 Type II/IV secretion system protein E4O04_09620 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09645 IPR003593 AAA+ ATPase domain E4O04_09645 IPR004346 CagE, TrbE, VirB component of type IV transporter system E4O04_09645 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain E4O04_09645 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09670 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI E4O04_09670 IPR042217 Type IV secretion system, VirB10/TrbI E4O04_09720 IPR000330 SNF2-related, N-terminal domain E4O04_09720 IPR007527 Zinc finger, SWIM-type E4O04_09720 IPR001650 Helicase, C-terminal E4O04_09720 IPR038718 SNF2-like, N-terminal domain superfamily E4O04_09720 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_09720 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09735 IPR020891 Uncharacterised protein family UPF0758, conserved site E4O04_09735 IPR037518 MPN domain E4O04_09735 IPR025657 RadC-like JAB domain E4O04_09735 IPR010994 RuvA domain 2-like E4O04_09735 IPR001405 Uncharacterised protein family UPF0758 E4O04_09775 IPR001091 Restriction/modification DNA-methylase E4O04_09775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_09775 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site E4O04_09775 IPR002941 DNA methylase N-4/N-6 E4O04_09780 IPR000424 Primosome PriB/single-strand DNA-binding E4O04_09780 IPR012340 Nucleic acid-binding, OB-fold E4O04_09780 IPR011344 Single-stranded DNA-binding protein E4O04_09835 IPR038363 LepA, C-terminal domain superfamily E4O04_09835 IPR013842 GTP-binding protein LepA, C-terminal E4O04_09835 IPR035654 Elongation factor 4, domain IV E4O04_09835 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09835 IPR005225 Small GTP-binding protein domain E4O04_09835 IPR000795 Transcription factor, GTP-binding domain E4O04_09835 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_09835 IPR000640 Elongation factor EFG, domain V-like E4O04_09835 IPR004161 Translation elongation factor EFTu-like, domain 2 E4O04_09835 IPR006297 Elongation factor 4 E4O04_09835 IPR041095 Elongation Factor G, domain II E4O04_09835 IPR035647 EF-G domain III/V-like E4O04_09845 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB E4O04_09845 IPR007202 4Fe-4S domain E4O04_09845 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_09845 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_09845 IPR011005 Dihydropteroate synthase-like E4O04_09850 IPR030388 Era-type guanine nucleotide-binding (G) domain E4O04_09850 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09850 IPR006073 GTP binding domain E4O04_09850 IPR015946 K homology domain-like, alpha/beta E4O04_09850 IPR004044 K Homology domain, type 2 E4O04_09850 IPR009019 K homology domain superfamily, prokaryotic type E4O04_09850 IPR005225 Small GTP-binding protein domain E4O04_09850 IPR005662 GTP-binding protein Era E4O04_09855 IPR002695 Bifunctional purine biosynthesis protein PurH-like E4O04_09855 IPR024051 AICAR transformylase, duplicated domain superfamily E4O04_09855 IPR016193 Cytidine deaminase-like E4O04_09855 IPR011607 Methylglyoxal synthase-like domain E4O04_09855 IPR036914 Methylglyoxal synthase-like domain superfamily E4O04_09860 IPR002376 Formyl transferase, N-terminal E4O04_09860 IPR036477 Formyl transferase, N-terminal domain superfamily E4O04_09860 IPR004607 Phosphoribosylglycinamide formyltransferase E4O04_09860 IPR001555 Phosphoribosylglycinamide formyltransferase, active site E4O04_09865 IPR020937 SecA conserved site E4O04_09865 IPR004027 SEC-C motif E4O04_09865 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09865 IPR036266 SecA, Wing/Scaffold superfamily E4O04_09865 IPR011116 SecA Wing/Scaffold E4O04_09865 IPR011130 SecA, preprotein cross-linking domain E4O04_09865 IPR036670 SecA, preprotein cross-linking domain superfamily E4O04_09865 IPR011115 SecA DEAD-like, N-terminal E4O04_09865 IPR014018 SecA motor DEAD E4O04_09865 IPR000185 Protein translocase subunit SecA E4O04_09870 IPR000524 Transcription regulator HTH, GntR E4O04_09870 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_09870 IPR036390 Winged helix DNA-binding domain superfamily E4O04_09875 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09875 IPR003593 AAA+ ATPase domain E4O04_09875 IPR003439 ABC transporter-like E4O04_09875 IPR017871 ABC transporter, conserved site E4O04_09885 IPR008278 4'-phosphopantetheinyl transferase domain E4O04_09885 IPR037143 4'-phosphopantetheinyl transferase domain superfamily E4O04_09885 IPR002582 Holo-[acyl carrier protein] synthase E4O04_09885 IPR004568 Phosphopantetheine-protein transferase domain E4O04_09895 IPR003390 DNA integrity scanning protein, DisA, N-terminal E4O04_09895 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily E4O04_09895 IPR014046 Diadenylate cyclase E4O04_09895 IPR034701 Diadenylate cyclase CdaA E4O04_09900 IPR005474 Transketolase, N-terminal E4O04_09900 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E4O04_09900 IPR033248 Transketolase, C-terminal domain E4O04_09900 IPR005475 Transketolase-like, pyrimidine-binding domain E4O04_09900 IPR020826 Transketolase binding site E4O04_09900 IPR029061 Thiamin diphosphate-binding fold E4O04_09900 IPR005477 Deoxyxylulose-5-phosphate synthase E4O04_09915 IPR003781 CoA-binding E4O04_09915 IPR036291 NAD(P)-binding domain superfamily E4O04_09915 IPR009718 Rex DNA-binding, C-terminal domain E4O04_09915 IPR022876 Redox-sensing transcriptional repressor Rex E4O04_09915 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_09915 IPR036390 Winged helix DNA-binding domain superfamily E4O04_09920 IPR019614 S-adenosylmethionine-dependent methyltransferase E4O04_09920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_09925 IPR036390 Winged helix DNA-binding domain superfamily E4O04_09925 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_09925 IPR008823 RuvB C-terminal winged helix domain E4O04_09925 IPR008824 RuvB-like P-loop domain E4O04_09925 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_09925 IPR003593 AAA+ ATPase domain E4O04_09925 IPR041445 RuvB, AAA lid domain E4O04_09925 IPR004605 DNA helicase, Holliday junction RuvB-type E4O04_09930 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E4O04_09930 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E4O04_09935 IPR000577 Carbohydrate kinase, FGGY E4O04_09935 IPR018485 Carbohydrate kinase, FGGY, C-terminal E4O04_09935 IPR018483 Carbohydrate kinase, FGGY, conserved site E4O04_09935 IPR018484 Carbohydrate kinase, FGGY, N-terminal E4O04_09935 IPR005999 Glycerol kinase E4O04_09950 IPR023885 4Fe4S-binding SPASM domain E4O04_09950 IPR027608 Spirochetes SPASM protein E4O04_09965 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E4O04_09985 IPR005147 tRNA synthetase, B5-domain E4O04_09985 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain E4O04_09985 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal E4O04_09985 IPR005146 B3/B4 tRNA-binding domain E4O04_09985 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic E4O04_09985 IPR009061 Putative DNA-binding domain superfamily E4O04_09985 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 E4O04_10000 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like E4O04_10005 IPR016192 APOBEC/CMP deaminase, zinc-binding E4O04_10005 IPR002125 Cytidine and deoxycytidylate deaminase domain E4O04_10005 IPR006262 Cytidine deaminase, homotetrameric E4O04_10005 IPR016193 Cytidine deaminase-like E4O04_10025 IPR002942 RNA-binding S4 domain E4O04_10025 IPR018079 Ribosomal protein S4, conserved site E4O04_10025 IPR036986 RNA-binding S4 domain superfamily E4O04_10025 IPR001912 Ribosomal protein S4/S9, N-terminal E4O04_10025 IPR022801 Ribosomal protein S4/S9 E4O04_10025 IPR005709 Ribosomal protein S4, bacterial-type E4O04_10055 IPR001851 ABC transporter, permease E4O04_10060 IPR001851 ABC transporter, permease E4O04_10060 IPR002229 Blood group Rhesus C/E/D polypeptide E4O04_10070 IPR028082 Periplasmic binding protein-like I E4O04_10070 IPR003760 ABC transporter substrate-binding protein PnrA-like E4O04_10075 IPR001279 Metallo-beta-lactamase E4O04_10075 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E4O04_10075 IPR013471 Ribonuclease Z/BN E4O04_10090 IPR036390 Winged helix DNA-binding domain superfamily E4O04_10090 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_10090 IPR004535 Translation elongation factor, selenocysteine-specific E4O04_10090 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_10090 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal E4O04_10090 IPR000795 Transcription factor, GTP-binding domain E4O04_10090 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10090 IPR015191 Translation elongation factor SelB, winged helix, type 3 E4O04_10090 IPR015190 Translation elongation factor SelB, winged helix, type 2 E4O04_10090 IPR015189 Translation elongation factor SelB, winged helix, type 1 E4O04_10090 IPR004161 Translation elongation factor EFTu-like, domain 2 E4O04_10090 IPR005225 Small GTP-binding protein domain E4O04_10095 IPR003841 Sodium-dependent phosphate transport protein E4O04_10095 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein E4O04_10100 IPR001478 PDZ domain E4O04_10100 IPR041489 PDZ domain 6 E4O04_10100 IPR036034 PDZ superfamily E4O04_10100 IPR011782 Peptidase S1C, Do E4O04_10100 IPR009003 Peptidase S1, PA clan E4O04_10100 IPR001940 Peptidase S1C E4O04_10110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_10110 IPR015507 Ribosomal RNA large subunit methyltransferase E E4O04_10110 IPR002877 Ribosomal RNA methyltransferase FtsJ domain E4O04_10115 IPR025944 Sigma-54 interaction domain, conserved site E4O04_10115 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E4O04_10115 IPR002078 RNA polymerase sigma factor 54 interaction domain E4O04_10115 IPR001789 Signal transduction response regulator, receiver domain E4O04_10115 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E4O04_10115 IPR002197 DNA binding HTH domain, Fis-type E4O04_10115 IPR009057 Homeobox-like domain superfamily E4O04_10115 IPR011006 CheY-like superfamily E4O04_10115 IPR003593 AAA+ ATPase domain E4O04_10115 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10120 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_10120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_10120 IPR005467 Histidine kinase domain E4O04_10120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E4O04_10120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E4O04_10120 IPR000700 PAS-associated, C-terminal E4O04_10120 IPR035965 PAS domain superfamily E4O04_10120 IPR000014 PAS domain E4O04_10120 IPR001610 PAC motif E4O04_10120 IPR013767 PAS fold E4O04_10120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E4O04_10125 IPR004622 DNA polymerase III, delta prime subunit E4O04_10125 IPR015199 DNA polymerase III, delta subunit, C-terminal E4O04_10125 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10130 IPR003825 Colicin V production, CvpA E4O04_10135 IPR006009 N-acetylglucosaminyltransferase, MurG E4O04_10135 IPR007235 Glycosyl transferase, family 28, C-terminal E4O04_10135 IPR004276 Glycosyltransferase family 28, N-terminal domain E4O04_10185 IPR006860 FecR protein E4O04_10185 IPR013783 Immunoglobulin-like fold E4O04_10190 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_10190 IPR003660 HAMP domain E4O04_10190 IPR029787 Nucleotide cyclase E4O04_10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10210 IPR001650 Helicase, C-terminal E4O04_10210 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_10210 IPR006555 ATP-dependent helicase, C-terminal E4O04_10210 IPR010614 DEAD2 E4O04_10210 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type E4O04_10225 IPR004708 Aspartate ammonia-lyase E4O04_10225 IPR024083 Fumarase/histidase, N-terminal E4O04_10225 IPR018951 Fumarase C, C-terminal E4O04_10225 IPR020557 Fumarate lyase, conserved site E4O04_10225 IPR000362 Fumarate lyase family E4O04_10225 IPR022761 Fumarate lyase, N-terminal E4O04_10225 IPR008948 L-Aspartase-like E4O04_10230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_10230 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_10230 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10230 IPR004482 Mg chelatase-related protein E4O04_10230 IPR025158 Mg chelatase-related protein, C-terminal domain E4O04_10230 IPR000523 Magnesium chelatase ChlI domain E4O04_10230 IPR001208 MCM domain E4O04_10230 IPR003593 AAA+ ATPase domain E4O04_10240 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I E4O04_10240 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III E4O04_10240 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II E4O04_10240 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III E4O04_10240 IPR005843 Alpha-D-phosphohexomutase, C-terminal E4O04_10240 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily E4O04_10240 IPR016066 Alpha-D-phosphohexomutase, conserved site E4O04_10240 IPR005841 Alpha-D-phosphohexomutase superfamily E4O04_10245 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain E4O04_10245 IPR013520 Exonuclease, RNase T/DNA polymerase III E4O04_10245 IPR012337 Ribonuclease H-like superfamily E4O04_10245 IPR036397 Ribonuclease H superfamily E4O04_10250 IPR004438 Peptidase M3B, oligoendopeptidase F E4O04_10250 IPR001567 Peptidase M3A/M3B catalytic domain E4O04_10250 IPR042088 Oligoendopeptidase F, C-terminal domain E4O04_10250 IPR013647 Oligopeptidase F, N-terminal domain E4O04_10255 IPR039606 Phytol/farnesol kinase E4O04_10260 IPR008949 Isoprenoid synthase domain superfamily E4O04_10260 IPR002060 Squalene/phytoene synthase E4O04_10260 IPR019845 Squalene/phytoene synthase, conserved site E4O04_10260 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head E4O04_10265 IPR002937 Amine oxidase E4O04_10265 IPR014105 Carotenoid/retinoid oxidoreductase E4O04_10265 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_10270 IPR009057 Homeobox-like domain superfamily E4O04_10270 IPR023769 Nucleoid occlusion factor SlmA E4O04_10270 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E4O04_10270 IPR001647 DNA-binding HTH domain, TetR-type E4O04_10295 IPR018385 C4-dicarboxylate anaerobic carrier-like E4O04_10305 IPR002933 Peptidase M20 E4O04_10305 IPR011650 Peptidase M20, dimerisation domain E4O04_10305 IPR001160 Peptidase M20C, Xaa-His dipeptidase E4O04_10440 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal E4O04_10440 IPR036737 OmpA-like domain superfamily E4O04_10440 IPR039001 Peptidoglycan-associated lipoprotein E4O04_10440 IPR006665 OmpA-like domain E4O04_10440 IPR006664 Outer membrane protein, bacterial E4O04_10440 IPR006690 Outer membrane protein, OmpA-like, conserved site E4O04_10445 IPR018228 Deoxyribonuclease, TatD-related, conserved site E4O04_10445 IPR015991 Uncharacterised hydrolase TatD-type E4O04_10445 IPR032466 Metal-dependent hydrolase E4O04_10445 IPR001130 TatD family E4O04_10455 IPR009009 RlpA-like protein, double-psi beta-barrel domain E4O04_10455 IPR012997 Rare lipoprotein A E4O04_10455 IPR036908 RlpA-like domain superfamily E4O04_10455 IPR034718 Endolytic peptidoglycan transglycosylase RlpA E4O04_10455 IPR009009 RlpA-like protein, double-psi beta-barrel domain E4O04_10455 IPR036908 RlpA-like domain superfamily E4O04_10455 IPR034718 Endolytic peptidoglycan transglycosylase RlpA E4O04_10455 IPR012997 Rare lipoprotein A E4O04_10465 IPR011831 Glucose-1-phosphate adenylyltransferase E4O04_10465 IPR005836 ADP-glucose pyrophosphorylase, conserved site E4O04_10465 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial E4O04_10465 IPR005835 Nucleotidyl transferase domain E4O04_10465 IPR029044 Nucleotide-diphospho-sugar transferases E4O04_10465 IPR011004 Trimeric LpxA-like superfamily E4O04_10470 IPR019489 Clp ATPase, C-terminal E4O04_10470 IPR003593 AAA+ ATPase domain E4O04_10470 IPR003959 ATPase, AAA-type, core E4O04_10470 IPR004176 Clp, N-terminal E4O04_10470 IPR036628 Clp, N-terminal domain superfamily E4O04_10470 IPR018368 ClpA/B, conserved site 1 E4O04_10470 IPR028299 ClpA/B, conserved site 2 E4O04_10470 IPR041546 ClpA/ClpB, AAA lid domain E4O04_10470 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10470 IPR001943 UVR domain E4O04_10470 IPR001270 ClpA/B family E4O04_10475 IPR023660 Protein arginine kinase E4O04_10475 IPR000749 ATP:guanido phosphotransferase E4O04_10475 IPR022415 ATP:guanido phosphotransferase active site E4O04_10475 IPR022414 ATP:guanido phosphotransferase, catalytic domain E4O04_10475 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain E4O04_10480 IPR001943 UVR domain E4O04_10480 IPR025542 YacH protein E4O04_10480 IPR001510 Zinc finger, PARP-type E4O04_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10490 IPR017871 ABC transporter, conserved site E4O04_10490 IPR015854 ABC transporter, lipoprotein release, LolD E4O04_10490 IPR003593 AAA+ ATPase domain E4O04_10490 IPR003439 ABC transporter-like E4O04_10495 IPR003838 ABC transporter permease protein domain E4O04_10495 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E E4O04_10495 IPR025857 MacB-like periplasmic core domain E4O04_10505 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily E4O04_10505 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain E4O04_10505 IPR004390 Signal-recognition particle receptor FtsY E4O04_10505 IPR036225 SRP/SRP receptor, N-terminal E4O04_10505 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10505 IPR003593 AAA+ ATPase domain E4O04_10505 IPR013822 Signal recognition particle SRP54, helical bundle E4O04_10520 IPR005139 Peptide chain release factor E4O04_10520 IPR000352 Peptide chain release factor class I E4O04_10520 IPR004374 Peptide chain release factor 2 E4O04_10535 IPR000914 Solute-binding protein family 5 domain E4O04_10535 IPR030678 Peptide/nickel binding protein, MppA-type E4O04_10535 IPR039424 Solute-binding protein family 5 E4O04_10535 IPR023765 Solute-binding protein family 5, conserved site E4O04_10555 IPR016187 C-type lectin fold E4O04_10555 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_10555 IPR005532 Sulfatase-modifying factor enzyme E4O04_10575 IPR000192 Aminotransferase class V domain E4O04_10575 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E4O04_10575 IPR010970 Cysteine desulfurase, SufS E4O04_10575 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_10575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_10575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_10620 IPR041069 FeoB, cytosolic helical domain E4O04_10620 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10620 IPR006073 GTP binding domain E4O04_10620 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain E4O04_10620 IPR030389 FeoB-type guanine nucleotide-binding (G) domain E4O04_10620 IPR007167 Ferrous iron transporter FeoA domain E4O04_10620 IPR038157 Ferrous iron transporter, core domain E4O04_10620 IPR011640 Ferrous iron transport protein B, C-terminal E4O04_10620 IPR003373 Ferrous iron transport protein B E4O04_10620 IPR005225 Small GTP-binding protein domain E4O04_10620 IPR008988 Transcriptional repressor, C-terminal E4O04_10625 IPR038157 Ferrous iron transporter, core domain E4O04_10625 IPR008988 Transcriptional repressor, C-terminal E4O04_10625 IPR007167 Ferrous iron transporter FeoA domain E4O04_10635 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10635 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_10635 IPR003593 AAA+ ATPase domain E4O04_10635 IPR003439 ABC transporter-like E4O04_10635 IPR017871 ABC transporter, conserved site E4O04_10635 IPR039421 Type I protein exporter E4O04_10635 IPR011527 ABC transporter type 1, transmembrane domain E4O04_10640 IPR011527 ABC transporter type 1, transmembrane domain E4O04_10640 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_10640 IPR003439 ABC transporter-like E4O04_10640 IPR017871 ABC transporter, conserved site E4O04_10640 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10640 IPR039421 Type I protein exporter E4O04_10640 IPR003593 AAA+ ATPase domain E4O04_10645 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_10645 IPR018631 AAA-ATPase-like domain E4O04_10650 IPR003761 Exonuclease VII, small subunit E4O04_10650 IPR037004 Exonuclease VII, small subunit superfamily E4O04_10655 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_10655 IPR037198 MutL, C-terminal domain superfamily E4O04_10655 IPR042121 MutL, C-terminal domain, regulatory subdomain E4O04_10655 IPR042120 MutL, C-terminal domain, dimerisation subdomain E4O04_10655 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_10655 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms E4O04_10655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_10655 IPR013507 DNA mismatch repair protein, S5 domain 2-like E4O04_10655 IPR002099 DNA mismatch repair protein family, N-terminal E4O04_10655 IPR014762 DNA mismatch repair, conserved site E4O04_10655 IPR020667 DNA mismatch repair protein, MutL E4O04_10655 IPR014790 MutL, C-terminal, dimerisation E4O04_10665 IPR006056 RidA family E4O04_10665 IPR019897 RidA, conserved site E4O04_10665 IPR035959 RutC-like superfamily E4O04_10665 IPR006175 YjgF/YER057c/UK114 family E4O04_10690 IPR007197 Radical SAM E4O04_10690 IPR027492 Dual-specificity RNA methyltransferase RlmN E4O04_10690 IPR040072 Methyltransferase (Class A) E4O04_10690 IPR006638 Elp3/MiaB/NifB E4O04_10690 IPR013785 Aldolase-type TIM barrel E4O04_10690 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr E4O04_10695 IPR001633 EAL domain E4O04_10695 IPR035919 EAL domain superfamily E4O04_10695 IPR000160 GGDEF domain E4O04_10695 IPR005330 MHYT domain E4O04_10695 IPR029787 Nucleotide cyclase E4O04_10710 IPR011990 Tetratricopeptide-like helical domain superfamily E4O04_10710 IPR013026 Tetratricopeptide repeat-containing domain E4O04_10715 IPR025944 Sigma-54 interaction domain, conserved site E4O04_10715 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E4O04_10715 IPR002078 RNA polymerase sigma factor 54 interaction domain E4O04_10715 IPR001789 Signal transduction response regulator, receiver domain E4O04_10715 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10715 IPR002197 DNA binding HTH domain, Fis-type E4O04_10715 IPR009057 Homeobox-like domain superfamily E4O04_10715 IPR011006 CheY-like superfamily E4O04_10715 IPR003593 AAA+ ATPase domain E4O04_10715 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E4O04_10720 IPR012340 Nucleic acid-binding, OB-fold E4O04_10720 IPR000110 Ribosomal protein S1 E4O04_10720 IPR022967 RNA-binding domain, S1 E4O04_10720 IPR003029 S1 domain E4O04_10735 IPR029028 Alpha/beta knot methyltransferases E4O04_10735 IPR004384 RNA methyltransferase TrmJ/LasT E4O04_10735 IPR001537 tRNA/rRNA methyltransferase, SpoU type E4O04_10735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E4O04_10740 IPR015963 Uridylate kinase, bacteria E4O04_10740 IPR036393 Acetylglutamate kinase-like superfamily E4O04_10740 IPR001048 Aspartate/glutamate/uridylate kinase E4O04_10740 IPR011817 Uridylate kinase E4O04_10745 IPR002939 Chaperone DnaJ, C-terminal E4O04_10745 IPR012724 Chaperone DnaJ E4O04_10745 IPR036869 Chaperone J-domain superfamily E4O04_10745 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily E4O04_10745 IPR001305 Heat shock protein DnaJ, cysteine-rich domain E4O04_10745 IPR008971 HSP40/DnaJ peptide-binding E4O04_10745 IPR018253 DnaJ domain, conserved site E4O04_10745 IPR001623 DnaJ domain E4O04_10750 IPR004368 Translation initiation factor IF-1 E4O04_10750 IPR022967 RNA-binding domain, S1 E4O04_10750 IPR006196 RNA-binding domain, S1, IF1 type E4O04_10750 IPR012340 Nucleic acid-binding, OB-fold E4O04_10755 IPR020458 Zinc finger, DksA/TraR C4-type conserved site E4O04_10755 IPR037187 DksA, N-terminal domain superfamily E4O04_10755 IPR000962 Zinc finger, DksA/TraR C4-type E4O04_10760 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain E4O04_10760 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily E4O04_10760 IPR022941 Signal recognition particle, SRP54 subunit E4O04_10760 IPR004780 Signal recognition particle protein E4O04_10760 IPR004125 Signal recognition particle, SRP54 subunit, M-domain E4O04_10760 IPR013822 Signal recognition particle SRP54, helical bundle E4O04_10760 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily E4O04_10760 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10760 IPR003593 AAA+ ATPase domain E4O04_10765 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E4O04_10765 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent E4O04_10765 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal E4O04_10765 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal E4O04_10765 IPR036291 NAD(P)-binding domain superfamily E4O04_10765 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E4O04_10770 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E4O04_10770 IPR018313 Solute-binding protein family 3, conserved site E4O04_10770 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter E4O04_10775 IPR001320 Ionotropic glutamate receptor E4O04_10775 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter E4O04_10775 IPR018313 Solute-binding protein family 3, conserved site E4O04_10775 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E4O04_10785 IPR001466 Beta-lactamase-related E4O04_10785 IPR012338 Beta-lactamase/transpeptidase-like E4O04_10790 IPR008302 Uncharacterised conserved protein UCP016719 E4O04_10835 IPR032466 Metal-dependent hydrolase E4O04_10835 IPR006680 Amidohydrolase-related E4O04_10835 IPR004722 Dihydroorotase E4O04_10835 IPR002195 Dihydroorotase, conserved site E4O04_10835 IPR011059 Metal-dependent hydrolase, composite domain superfamily E4O04_10845 IPR014014 RNA helicase, DEAD-box type, Q motif E4O04_10845 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site E4O04_10845 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10845 IPR011545 DEAD/DEAH box helicase domain E4O04_10845 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_10845 IPR030880 DEAD-box ATP-dependent RNA helicase CshA E4O04_10845 IPR001650 Helicase, C-terminal E4O04_10865 IPR013785 Aldolase-type TIM barrel E4O04_10865 IPR018089 Orotidine 5'-phosphate decarboxylase, active site E4O04_10865 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 E4O04_10865 IPR001754 Orotidine 5'-phosphate decarboxylase domain E4O04_10865 IPR011060 Ribulose-phosphate binding barrel E4O04_10885 IPR003593 AAA+ ATPase domain E4O04_10885 IPR003439 ABC transporter-like E4O04_10885 IPR017871 ABC transporter, conserved site E4O04_10885 IPR025302 Domain of unknown function DUF4162 E4O04_10885 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10890 IPR036457 PPM-type phosphatase domain superfamily E4O04_10890 IPR001932 PPM-type phosphatase domain E4O04_10890 IPR003660 HAMP domain E4O04_10900 IPR005362 Uncharacterised protein family UPF0164 E4O04_10905 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E4O04_10905 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal E4O04_10905 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta E4O04_10905 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily E4O04_10910 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_10910 IPR003593 AAA+ ATPase domain E4O04_10910 IPR039421 Type I protein exporter E4O04_10910 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10910 IPR017871 ABC transporter, conserved site E4O04_10910 IPR003439 ABC transporter-like E4O04_10910 IPR011527 ABC transporter type 1, transmembrane domain E4O04_10920 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta E4O04_10920 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta E4O04_10925 IPR003828 Epoxyqueuosine reductase QueH E4O04_10935 IPR022935 ATP-dependent Clp protease adaptor protein ClpS E4O04_10935 IPR003769 Adaptor protein ClpS, core E4O04_10935 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like E4O04_10940 IPR003593 AAA+ ATPase domain E4O04_10940 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_10940 IPR041546 ClpA/ClpB, AAA lid domain E4O04_10940 IPR028299 ClpA/B, conserved site 2 E4O04_10940 IPR003959 ATPase, AAA-type, core E4O04_10940 IPR001270 ClpA/B family E4O04_10940 IPR036628 Clp, N-terminal domain superfamily E4O04_10940 IPR019489 Clp ATPase, C-terminal E4O04_10940 IPR018368 ClpA/B, conserved site 1 E4O04_10940 IPR004176 Clp, N-terminal E4O04_10940 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA E4O04_10945 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase E4O04_10945 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal E4O04_10945 IPR016181 Acyl-CoA N-acyltransferase E4O04_10970 IPR018024 Cobalamin (vitamin B12) transport protein CbiM E4O04_10970 IPR002751 Metal transport protein CbiM/NikMN E4O04_10975 IPR003593 AAA+ ATPase domain E4O04_10975 IPR003439 ABC transporter-like E4O04_10975 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11010 IPR002470 Peptidase S9A, prolyl oligopeptidase E4O04_11010 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain E4O04_11010 IPR023302 Peptidase S9A, N-terminal domain E4O04_11010 IPR002471 Peptidase S9, serine active site E4O04_11010 IPR029058 Alpha/Beta hydrolase fold E4O04_11015 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_11015 IPR018631 AAA-ATPase-like domain E4O04_11020 IPR012338 Beta-lactamase/transpeptidase-like E4O04_11020 IPR001264 Glycosyl transferase, family 51 E4O04_11020 IPR023346 Lysozyme-like domain superfamily E4O04_11020 IPR011815 Penicillin-binding protein 1C E4O04_11020 IPR009647 Penicillin-binding, C-terminal E4O04_11020 IPR036950 Penicillin binding protein transglycosylase domain E4O04_11020 IPR001460 Penicillin-binding protein, transpeptidase E4O04_11025 IPR021144 Uncharacterised protein family UPF0597 E4O04_11025 IPR005130 Serine dehydratase-like, alpha subunit E4O04_11030 IPR016187 C-type lectin fold E4O04_11030 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_11030 IPR005532 Sulfatase-modifying factor enzyme E4O04_11050 IPR036779 LysM domain superfamily E4O04_11050 IPR000189 Prokaryotic transglycosylase, active site E4O04_11050 IPR008258 Transglycosylase SLT domain 1 E4O04_11050 IPR018392 LysM domain E4O04_11050 IPR023346 Lysozyme-like domain superfamily E4O04_11060 IPR003791 Protein of unknown function UPF0178 E4O04_11065 IPR007838 Cell division protein ZapA-like E4O04_11065 IPR036192 Cell division protein ZapA-like superfamily E4O04_11075 IPR005813 Ribosomal protein L20 E4O04_11075 IPR035566 Ribosomal protein L20, C-terminal E4O04_11080 IPR021137 Ribosomal protein L35 E4O04_11080 IPR018265 Ribosomal protein L35, conserved site E4O04_11080 IPR001706 Ribosomal protein L35, non-mitochondrial E4O04_11080 IPR037229 Ribosomal protein L35 superfamily E4O04_11085 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily E4O04_11085 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily E4O04_11085 IPR019813 Translation initiation factor 3, conserved site E4O04_11085 IPR001288 Translation initiation factor 3 E4O04_11085 IPR019815 Translation initiation factor 3, C-terminal E4O04_11085 IPR019814 Translation initiation factor 3, N-terminal E4O04_11125 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11125 IPR003439 ABC transporter-like E4O04_11125 IPR017871 ABC transporter, conserved site E4O04_11125 IPR003593 AAA+ ATPase domain E4O04_11135 IPR018631 AAA-ATPase-like domain E4O04_11135 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_11140 IPR016181 Acyl-CoA N-acyltransferase E4O04_11140 IPR000182 GNAT domain E4O04_11145 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type E4O04_11145 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal E4O04_11145 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain E4O04_11145 IPR011023 Nop2p E4O04_11145 IPR023267 RNA (C5-cytosine) methyltransferase E4O04_11145 IPR023545 rRNA small subunit methyltransferase F E4O04_11145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_11145 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site E4O04_11150 IPR007395 Putative neutral zinc metallopeptidase E4O04_11170 IPR013216 Methyltransferase type 11 E4O04_11170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_11180 IPR004706 Arsenical-resistance protein Acr3 E4O04_11180 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 E4O04_11180 IPR038770 Sodium/solute symporter superfamily E4O04_11195 IPR005524 Predicted permease DUF318 E4O04_11200 IPR001845 HTH ArsR-type DNA-binding domain E4O04_11200 IPR018334 ArsR-type transcription regulator, HTH motif E4O04_11200 IPR036390 Winged helix DNA-binding domain superfamily E4O04_11200 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_11200 IPR011991 ArsR-like helix-turn-helix domain E4O04_11230 IPR023861 Chloride channel, ClcA E4O04_11230 IPR014743 Chloride channel, core E4O04_11230 IPR001807 Chloride channel, voltage gated E4O04_11235 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 E4O04_11235 IPR005225 Small GTP-binding protein domain E4O04_11235 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11235 IPR025867 MnmE, helical domain E4O04_11235 IPR006073 GTP binding domain E4O04_11235 IPR018948 GTP-binding protein TrmE, N-terminal E4O04_11235 IPR031168 TrmE-type guanine nucleotide-binding domain E4O04_11235 IPR027368 tRNA modification GTPase MnmE domain 2 E4O04_11235 IPR004520 tRNA modification GTPase MnmE E4O04_11240 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily E4O04_11240 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase E4O04_11250 IPR025682 CpXC domain E4O04_11265 IPR000873 AMP-dependent synthetase/ligase E4O04_11265 IPR042099 AMP-dependent synthetase-like superfamily E4O04_11265 IPR020845 AMP-binding, conserved site E4O04_11270 IPR003115 ParB/Sulfiredoxin E4O04_11270 IPR036086 ParB/Sulfiredoxin superfamily E4O04_11270 IPR041468 ParB/Spo0J, HTH domain E4O04_11270 IPR004437 ParB/RepB/Spo0J partition protein E4O04_11280 IPR011055 Duplicated hybrid motif E4O04_11280 IPR016047 Peptidase M23 E4O04_11285 IPR001667 DDH domain E4O04_11285 IPR038763 DHH phosphoesterase superfamily E4O04_11285 IPR003156 DHHA1 domain E4O04_11285 IPR004610 Bacterial RecJ exonuclease E4O04_11285 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal E4O04_11285 IPR041122 RecJ, OB domain E4O04_11290 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily E4O04_11290 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase E4O04_11290 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site E4O04_11290 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic E4O04_11290 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal E4O04_11290 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily E4O04_11290 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily E4O04_11290 IPR017459 Glycosyl transferase family 3, N-terminal domain E4O04_11290 IPR000312 Glycosyl transferase, family 3 E4O04_11305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_11305 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site E4O04_11305 IPR004839 Aminotransferase, class I/classII E4O04_11305 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type E4O04_11305 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type E4O04_11305 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_11305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_11310 IPR036986 RNA-binding S4 domain superfamily E4O04_11310 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E4O04_11310 IPR002942 RNA-binding S4 domain E4O04_11310 IPR006145 Pseudouridine synthase, RsuA/RluA E4O04_11310 IPR006225 Pseudouridine synthase, RluC/RluD E4O04_11310 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_11320 IPR029061 Thiamin diphosphate-binding fold E4O04_11320 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E4O04_11320 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E4O04_11320 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain E4O04_11320 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal E4O04_11320 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain E4O04_11320 IPR011895 Pyruvate-flavodoxin oxidoreductase E4O04_11320 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily E4O04_11320 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II E4O04_11320 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_11320 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_11320 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain E4O04_11325 IPR004391 Glutamate racemase E4O04_11325 IPR015942 Asp/Glu/hydantoin racemase E4O04_11325 IPR001920 Asp/Glu racemase E4O04_11325 IPR018187 Asp/Glu racemase, active site 1 E4O04_11325 IPR033134 Asp/Glu racemase, active site 2 E4O04_11330 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_11330 IPR006237 L-methionine gamma-lyase E4O04_11330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_11330 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme E4O04_11330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_11345 IPR004770 Na+/H+ antiporter NhaC E4O04_11345 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal E4O04_11355 IPR013785 Aldolase-type TIM barrel E4O04_11355 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_11355 IPR023753 FAD/NAD(P)-binding domain E4O04_11355 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal E4O04_11370 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 E4O04_11370 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily E4O04_11375 IPR011761 ATP-grasp fold E4O04_11375 IPR013815 ATP-grasp fold, subdomain 1 E4O04_11375 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site E4O04_11375 IPR005905 D-alanine--D-alanine ligase E4O04_11375 IPR011095 D-alanine--D-alanine ligase, C-terminal E4O04_11375 IPR011127 D-alanine--D-alanine ligase, N-terminal domain E4O04_11375 IPR016185 Pre-ATP-grasp domain superfamily E4O04_11380 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_11380 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_11380 IPR006206 Mevalonate/galactokinase E4O04_11380 IPR006204 GHMP kinase N-terminal domain E4O04_11380 IPR036554 GHMP kinase, C-terminal domain superfamily E4O04_11380 IPR019741 Galactokinase, conserved site E4O04_11380 IPR019539 Galactokinase galactose-binding domain E4O04_11380 IPR022963 Galactokinase, bacterial E4O04_11380 IPR000705 Galactokinase E4O04_11380 IPR013750 GHMP kinase, C-terminal domain E4O04_11400 IPR026669 Arsenite methyltransferase-like E4O04_11400 IPR025714 Methyltransferase domain E4O04_11400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_11405 IPR030158 Galactoside transport system permease protein MglC E4O04_11405 IPR001851 ABC transporter, permease E4O04_11410 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11410 IPR017871 ABC transporter, conserved site E4O04_11410 IPR015862 ABC transporter, galactose import, MglA E4O04_11410 IPR003593 AAA+ ATPase domain E4O04_11410 IPR003439 ABC transporter-like E4O04_11415 IPR040740 MglB-2, periplasmic binding protein domain E4O04_11415 IPR028082 Periplasmic binding protein-like I E4O04_11415 IPR025997 Periplasmic binding protein E4O04_11425 IPR036286 LexA/Signal peptidase-like superfamily E4O04_11425 IPR000223 Peptidase S26A, signal peptidase I E4O04_11425 IPR019758 Peptidase S26A, signal peptidase I, conserved site E4O04_11425 IPR019757 Peptidase S26A, signal peptidase I, lysine active site E4O04_11425 IPR019533 Peptidase S26 E4O04_11435 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain E4O04_11435 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily E4O04_11435 IPR033730 Prokaryote proline-tRNA ligase core domain E4O04_11435 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 E4O04_11435 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type E4O04_11435 IPR002316 Proline-tRNA ligase, class IIa E4O04_11435 IPR036621 Anticodon-binding domain superfamily E4O04_11435 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_11435 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E4O04_11435 IPR004154 Anticodon-binding E4O04_11455 IPR006129 Adhesin B E4O04_11455 IPR006128 Adhesion lipoprotein E4O04_11455 IPR006127 Periplasmic solute binding protein, ZnuA-like E4O04_11465 IPR002933 Peptidase M20 E4O04_11465 IPR011650 Peptidase M20, dimerisation domain E4O04_11465 IPR001160 Peptidase M20C, Xaa-His dipeptidase E4O04_11480 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11480 IPR003439 ABC transporter-like E4O04_11480 IPR017871 ABC transporter, conserved site E4O04_11480 IPR003593 AAA+ ATPase domain E4O04_11485 IPR037294 ABC transporter, BtuC-like E4O04_11485 IPR000522 ABC transporter, permease protein, BtuC-like E4O04_11495 IPR022665 Methylaspartate ammonia-lyase, N-terminal E4O04_11495 IPR036849 Enolase-like, C-terminal domain superfamily E4O04_11495 IPR029017 Enolase-like, N-terminal E4O04_11495 IPR022662 Methylaspartate ammonia-lyase, C-terminal E4O04_11495 IPR006395 Methylaspartate ammonia-lyase E4O04_11500 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily E4O04_11500 IPR006396 Glutamate mutase epsilon subunit E4O04_11500 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic E4O04_11510 IPR023648 Copper homeostasis CutC domain E4O04_11510 IPR005627 Copper homeostasis protein CutC E4O04_11510 IPR036822 Copper homeostasis (CutC) domain superfamily E4O04_11520 IPR002288 DNA gyrase B subunit, C-terminal E4O04_11520 IPR018522 DNA topoisomerase, type IIA, conserved site E4O04_11520 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 E4O04_11520 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal E4O04_11520 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E4O04_11520 IPR006171 TOPRIM domain E4O04_11520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_11520 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_11520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_11520 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_11520 IPR001241 DNA topoisomerase, type IIA E4O04_11525 IPR000594 THIF-type NAD/FAD binding fold E4O04_11525 IPR035985 Ubiquitin-activating enzyme E4O04_11530 IPR000715 Glycosyl transferase, family 4 E4O04_11530 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase E4O04_11530 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site E4O04_11540 IPR006043 Xanthine/uracil/vitamin C permease E4O04_11540 IPR029935 Uracil permease E4O04_11540 IPR006042 Xanthine/uracil permease E4O04_11560 IPR036397 Ribonuclease H superfamily E4O04_11560 IPR001584 Integrase, catalytic core E4O04_11560 IPR012337 Ribonuclease H-like superfamily E4O04_11560 IPR025948 HTH-like domain E4O04_11560 IPR038965 Transposase InsF-like E4O04_11570 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_11570 IPR018631 AAA-ATPase-like domain E4O04_11575 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core E4O04_11575 IPR011551 NTP pyrophosphohydrolase MazG E4O04_11580 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily E4O04_11580 IPR008104 Macrophage infectivity potentiator E4O04_11580 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E4O04_11580 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal E4O04_11585 IPR012947 Threonyl/alanyl tRNA synthetase, SAD E4O04_11585 IPR033728 Threonine-tRNA ligase catalytic core domain E4O04_11585 IPR002320 Threonine-tRNA ligase, class IIa E4O04_11585 IPR012676 TGS-like E4O04_11585 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily E4O04_11585 IPR012675 Beta-grasp domain superfamily E4O04_11585 IPR036621 Anticodon-binding domain superfamily E4O04_11585 IPR004154 Anticodon-binding E4O04_11585 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_11585 IPR004095 TGS E4O04_11585 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E4O04_11595 IPR029044 Nucleotide-diphospho-sugar transferases E4O04_11595 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site E4O04_11595 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily E4O04_11595 IPR034683 Cytidylyltransferase IspD/TarI E4O04_11595 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase E4O04_11595 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site E4O04_11600 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase E4O04_11600 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site E4O04_11600 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily E4O04_11610 IPR037512 Phosphoglycolate phosphatase, prokaryotic E4O04_11610 IPR036412 HAD-like superfamily E4O04_11610 IPR041492 Haloacid dehalogenase-like hydrolase E4O04_11610 IPR023214 HAD superfamily E4O04_11610 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E4O04_11610 IPR006439 HAD hydrolase, subfamily IA E4O04_11620 IPR006685 Mechanosensitive ion channel MscS E4O04_11620 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E4O04_11620 IPR011066 Mechanosensitive ion channel MscS, C-terminal E4O04_11620 IPR023408 Mechanosensitive ion channel MscS domain superfamily E4O04_11620 IPR010920 LSM domain superfamily E4O04_11635 IPR000705 Galactokinase E4O04_11635 IPR019539 Galactokinase galactose-binding domain E4O04_11635 IPR013750 GHMP kinase, C-terminal domain E4O04_11635 IPR036554 GHMP kinase, C-terminal domain superfamily E4O04_11635 IPR006206 Mevalonate/galactokinase E4O04_11635 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_11635 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_11640 IPR004563 Apolipoprotein N-acyltransferase E4O04_11640 IPR003010 Carbon-nitrogen hydrolase E4O04_11640 IPR036526 Carbon-nitrogen hydrolase superfamily E4O04_11645 IPR001940 Peptidase S1C E4O04_11645 IPR009003 Peptidase S1, PA clan E4O04_11645 IPR036034 PDZ superfamily E4O04_11645 IPR001478 PDZ domain E4O04_11645 IPR011782 Peptidase S1C, Do E4O04_11650 IPR006136 Flagellar biosynthetic protein FlhB E4O04_11650 IPR006135 Type III secretion system substrate exporter E4O04_11650 IPR029025 Type III secretion system substrate exporter, C-terminal E4O04_11655 IPR011006 CheY-like superfamily E4O04_11655 IPR003607 HD/PDEase domain E4O04_11655 IPR037522 HD-GYP domain E4O04_11655 IPR001789 Signal transduction response regulator, receiver domain E4O04_11660 IPR011335 Restriction endonuclease type II-like E4O04_11660 IPR011856 tRNA endonuclease-like domain superfamily E4O04_11660 IPR003509 Uncharacterised protein family UPF0102 E4O04_11675 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily E4O04_11675 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm E4O04_11675 IPR002317 Serine-tRNA ligase, type1 E4O04_11675 IPR015866 Serine-tRNA synthetase, type1, N-terminal E4O04_11675 IPR033729 Serine-tRNA ligase catalytic core domain E4O04_11675 IPR006195 Aminoacyl-tRNA synthetase, class II E4O04_11675 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E4O04_11695 IPR003593 AAA+ ATPase domain E4O04_11695 IPR003018 GAF domain E4O04_11695 IPR029016 GAF-like domain superfamily E4O04_11695 IPR009057 Homeobox-like domain superfamily E4O04_11695 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11695 IPR002078 RNA polymerase sigma factor 54 interaction domain E4O04_11695 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E4O04_11695 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E4O04_11695 IPR025944 Sigma-54 interaction domain, conserved site E4O04_11700 IPR001608 Alanine racemase, N-terminal E4O04_11700 IPR029066 PLP-binding barrel E4O04_11700 IPR011078 Pyridoxal phosphate homeostasis protein E4O04_11720 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_11720 IPR018631 AAA-ATPase-like domain E4O04_11725 IPR005744 Hly-III E4O04_11725 IPR004254 AdipoR/Haemolysin-III-related E4O04_11730 IPR023346 Lysozyme-like domain superfamily E4O04_11730 IPR016047 Peptidase M23 E4O04_11730 IPR010090 Phage tail tape measure protein E4O04_11730 IPR000189 Prokaryotic transglycosylase, active site E4O04_11730 IPR008258 Transglycosylase SLT domain 1 E4O04_11730 IPR011055 Duplicated hybrid motif E4O04_11740 IPR039425 RNA polymerase sigma-70 like E4O04_11740 IPR014293 RNA polymerase sigma-70, actinobacteria E4O04_11740 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site E4O04_11740 IPR007627 RNA polymerase sigma-70 region 2 E4O04_11740 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 E4O04_11740 IPR013325 RNA polymerase sigma factor, region 2 E4O04_11740 IPR013324 RNA polymerase sigma factor, region 3/4-like E4O04_11740 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_11740 IPR014284 RNA polymerase sigma-70 like domain E4O04_11755 IPR010920 LSM domain superfamily E4O04_11755 IPR030192 Miniconductance mechanosensitive channel YbdG E4O04_11755 IPR006685 Mechanosensitive ion channel MscS E4O04_11755 IPR011066 Mechanosensitive ion channel MscS, C-terminal E4O04_11760 IPR011006 CheY-like superfamily E4O04_11760 IPR016032 Signal transduction response regulator, C-terminal effector E4O04_11760 IPR001789 Signal transduction response regulator, receiver domain E4O04_11760 IPR000792 Transcription regulator LuxR, C-terminal E4O04_11770 IPR029062 Class I glutamine amidotransferase-like E4O04_11770 IPR017929 CobB/CobQ glutamine amidotransferase E4O04_11770 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 E4O04_11770 IPR004459 Cobyric acid synthase CobQ E4O04_11770 IPR011698 CobB/CobQ-like glutamine amidotransferase E4O04_11770 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11780 IPR002559 Transposase, IS4-like E4O04_11780 IPR008490 Transposase InsH, N-terminal E4O04_11800 IPR029787 Nucleotide cyclase E4O04_11800 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_11800 IPR003660 HAMP domain E4O04_11805 IPR003593 AAA+ ATPase domain E4O04_11805 IPR003959 ATPase, AAA-type, core E4O04_11805 IPR017730 Chaperonin ClpB E4O04_11805 IPR019489 Clp ATPase, C-terminal E4O04_11805 IPR036628 Clp, N-terminal domain superfamily E4O04_11805 IPR004176 Clp, N-terminal E4O04_11805 IPR001270 ClpA/B family E4O04_11805 IPR018368 ClpA/B, conserved site 1 E4O04_11805 IPR028299 ClpA/B, conserved site 2 E4O04_11805 IPR041546 ClpA/ClpB, AAA lid domain E4O04_11805 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11810 IPR011540 AbgT, Proteobacteria E4O04_11810 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT E4O04_11840 IPR014016 UvrD-like helicase, ATP-binding domain E4O04_11840 IPR013986 DExx box DNA helicase domain superfamily E4O04_11840 IPR014017 UvrD-like DNA helicase, C-terminal E4O04_11840 IPR000212 DNA helicase, UvrD/REP type E4O04_11840 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11840 IPR034739 UvrD/AddA helicase, N-terminal E4O04_11840 IPR005751 ATP-dependent DNA helicase PcrA E4O04_11845 IPR039421 Type I protein exporter E4O04_11845 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11845 IPR011527 ABC transporter type 1, transmembrane domain E4O04_11845 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_11845 IPR003593 AAA+ ATPase domain E4O04_11845 IPR003439 ABC transporter-like E4O04_11850 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_11850 IPR039421 Type I protein exporter E4O04_11850 IPR017871 ABC transporter, conserved site E4O04_11850 IPR003593 AAA+ ATPase domain E4O04_11850 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_11850 IPR011527 ABC transporter type 1, transmembrane domain E4O04_11850 IPR003439 ABC transporter-like E4O04_11855 IPR001991 Sodium:dicarboxylate symporter E4O04_11855 IPR036458 Sodium:dicarboxylate symporter superfamily E4O04_11855 IPR023025 Serine/threonine transporter SstT E4O04_11860 IPR035097 Peptidase M29, N-terminal E4O04_11860 IPR000787 Peptidase M29 E4O04_11865 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E4O04_11865 IPR002300 Aminoacyl-tRNA synthetase, class Ia E4O04_11865 IPR025709 Leucyl-tRNA synthetase, editing domain E4O04_11865 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain E4O04_11865 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E4O04_11865 IPR002302 Leucine-tRNA ligase E4O04_11865 IPR015413 Methionyl/Leucyl tRNA synthetase E4O04_11865 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding E4O04_11865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_11875 IPR001478 PDZ domain E4O04_11875 IPR041489 PDZ domain 6 E4O04_11875 IPR036034 PDZ superfamily E4O04_11875 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase E4O04_11875 IPR008915 Peptidase M50 E4O04_11880 IPR036291 NAD(P)-binding domain superfamily E4O04_11880 IPR036169 DXP reductoisomerase, C-terminal domain superfamily E4O04_11880 IPR026877 DXP reductoisomerase C-terminal domain E4O04_11880 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4O04_11880 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal E4O04_11880 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal E4O04_11885 IPR000374 Phosphatidate cytidylyltransferase E4O04_11890 IPR001441 Decaprenyl diphosphate synthase-like E4O04_11890 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site E4O04_11890 IPR036424 Decaprenyl diphosphate synthase-like superfamily E4O04_11895 IPR002661 Ribosome recycling factor E4O04_11895 IPR023584 Ribosome recycling factor domain E4O04_11895 IPR036191 RRF superfamily E4O04_11900 IPR018101 Translation elongation factor Ts, conserved site E4O04_11900 IPR009060 UBA-like superfamily E4O04_11900 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation E4O04_11900 IPR036402 Elongation factor Ts, dimerisation domain superfamily E4O04_11900 IPR001816 Translation elongation factor EFTs/EF1B E4O04_11905 IPR001865 Ribosomal protein S2 E4O04_11905 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid E4O04_11905 IPR018130 Ribosomal protein S2, conserved site E4O04_11905 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily E4O04_11910 IPR029001 Inosine triphosphate pyrophosphatase-like E4O04_11910 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein E4O04_11915 IPR011989 Armadillo-like helical E4O04_11915 IPR016024 Armadillo-type fold E4O04_11930 IPR010810 Flagellin hook, IN motif E4O04_11930 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E4O04_11930 IPR002371 Flagellar hook-associated protein 1 E4O04_11935 IPR010810 Flagellin hook, IN motif E4O04_11935 IPR001029 Flagellin, D0/D1 domain E4O04_11935 IPR001492 Flagellin E4O04_11935 IPR042187 Flagellin, C-terminal domain, subdomain 2 E4O04_11940 IPR003775 Flagellar assembly factor FliW E4O04_11940 IPR024046 Flagellar assembly factor FliW domain superfamily E4O04_11945 IPR003751 Translational regulator CsrA E4O04_11945 IPR036107 Carbon storage regulator superfamily E4O04_11955 IPR037294 ABC transporter, BtuC-like E4O04_11955 IPR000522 ABC transporter, permease protein, BtuC-like E4O04_11965 IPR036117 DhaL domain superfamily E4O04_11965 IPR004006 DhaK domain E4O04_11965 IPR004007 DhaL domain E4O04_11970 IPR004006 DhaK domain E4O04_11970 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 E4O04_11985 IPR011059 Metal-dependent hydrolase, composite domain superfamily E4O04_11985 IPR013108 Amidohydrolase 3 E4O04_11985 IPR032466 Metal-dependent hydrolase E4O04_11985 IPR033932 YtcJ like E4O04_11990 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal E4O04_12000 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily E4O04_12000 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain E4O04_12010 IPR011399 Nitrous oxide reductase expression regulator NosR E4O04_12010 IPR007329 FMN-binding E4O04_12010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_12015 IPR013740 Redoxin E4O04_12015 IPR036249 Thioredoxin-like superfamily E4O04_12015 IPR017937 Thioredoxin, conserved site E4O04_12015 IPR013766 Thioredoxin domain E4O04_12020 IPR014777 Tetrapyrrole methylase, subdomain 1 E4O04_12020 IPR035996 Tetrapyrrole methylase superfamily E4O04_12020 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase E4O04_12020 IPR000878 Tetrapyrrole methylase E4O04_12025 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit E4O04_12025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_12025 IPR007848 Methyltransferase small domain E4O04_12040 IPR003593 AAA+ ATPase domain E4O04_12040 IPR003439 ABC transporter-like E4O04_12040 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12040 IPR017871 ABC transporter, conserved site E4O04_12055 IPR003594 Histidine kinase/HSP90-like ATPase E4O04_12055 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain E4O04_12055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E4O04_12065 IPR003805 Adenosylcobinamide-GDP ribazoletransferase E4O04_12075 IPR013815 ATP-grasp fold, subdomain 1 E4O04_12075 IPR011761 ATP-grasp fold E4O04_12075 IPR011095 D-alanine--D-alanine ligase, C-terminal E4O04_12075 IPR011127 D-alanine--D-alanine ligase, N-terminal domain E4O04_12075 IPR016185 Pre-ATP-grasp domain superfamily E4O04_12075 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site E4O04_12075 IPR005905 D-alanine--D-alanine ligase E4O04_12085 IPR003385 Glycoside hydrolase, family 77 E4O04_12085 IPR017853 Glycoside hydrolase superfamily E4O04_12105 IPR008490 Transposase InsH, N-terminal E4O04_12105 IPR002559 Transposase, IS4-like E4O04_12110 IPR000727 Target SNARE coiled-coil homology domain E4O04_12110 IPR029151 Periplasmic sensor-like domain superfamily E4O04_12110 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_12110 IPR003660 HAMP domain E4O04_12110 IPR033479 Double Cache domain 1 E4O04_12115 IPR000640 Elongation factor EFG, domain V-like E4O04_12115 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_12115 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12115 IPR041095 Elongation Factor G, domain II E4O04_12115 IPR004161 Translation elongation factor EFTu-like, domain 2 E4O04_12115 IPR035649 EFG, domain V E4O04_12115 IPR009022 Elongation factor G, domain III E4O04_12115 IPR035647 EF-G domain III/V-like E4O04_12115 IPR031157 Tr-type G domain, conserved site E4O04_12115 IPR000795 Transcription factor, GTP-binding domain E4O04_12115 IPR005225 Small GTP-binding protein domain E4O04_12115 IPR004540 Translation elongation factor EFG/EF2 E4O04_12115 IPR005517 Translation elongation factor EFG/EF2, domain IV E4O04_12115 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_12125 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_12125 IPR016187 C-type lectin fold E4O04_12125 IPR000719 Protein kinase domain E4O04_12125 IPR005532 Sulfatase-modifying factor enzyme E4O04_12125 IPR011009 Protein kinase-like domain superfamily E4O04_12130 IPR042095 Sulfatase-modifying factor enzyme superfamily E4O04_12130 IPR005532 Sulfatase-modifying factor enzyme E4O04_12130 IPR016187 C-type lectin fold E4O04_12150 IPR025110 AMP-binding enzyme, C-terminal domain E4O04_12150 IPR020459 AMP-binding E4O04_12150 IPR020845 AMP-binding, conserved site E4O04_12150 IPR000873 AMP-dependent synthetase/ligase E4O04_12150 IPR042099 AMP-dependent synthetase-like superfamily E4O04_12155 IPR038765 Papain-like cysteine peptidase superfamily E4O04_12155 IPR000064 Endopeptidase, NLPC/P60 domain E4O04_12165 IPR002816 TraB family E4O04_12165 IPR040230 Metalloprotease TIKI1/2-like E4O04_12170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_12170 IPR004114 THUMP domain E4O04_12170 IPR000241 Putative RNA methylase domain E4O04_12170 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_12175 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_12175 IPR013325 RNA polymerase sigma factor, region 2 E4O04_12175 IPR028630 RNA polymerase sigma factor RpoD E4O04_12175 IPR042189 Sigma-70 factor, region 1.1 superfamily E4O04_12175 IPR014284 RNA polymerase sigma-70 like domain E4O04_12175 IPR012760 RNA polymerase sigma factor RpoD, C-terminal E4O04_12175 IPR007630 RNA polymerase sigma-70 region 4 E4O04_12175 IPR007624 RNA polymerase sigma-70 region 3 E4O04_12175 IPR007127 RNA polymerase sigma factor 70, region 1.1 E4O04_12175 IPR013324 RNA polymerase sigma factor, region 3/4-like E4O04_12175 IPR000943 RNA polymerase sigma-70 E4O04_12175 IPR007627 RNA polymerase sigma-70 region 2 E4O04_12175 IPR009042 RNA polymerase sigma-70 region 1.2 E4O04_12180 IPR020818 GroES chaperonin family E4O04_12180 IPR037124 GroES chaperonin superfamily E4O04_12180 IPR018369 Chaperonin GroES, conserved site E4O04_12180 IPR011032 GroES-like superfamily E4O04_12195 IPR009003 Peptidase S1, PA clan E4O04_12195 IPR001940 Peptidase S1C E4O04_12200 IPR004372 Acetate/propionate kinase E4O04_12200 IPR000890 Aliphatic acid kinase, short-chain E4O04_12200 IPR023865 Aliphatic acid kinase, short-chain, conserved site E4O04_12205 IPR029787 Nucleotide cyclase E4O04_12205 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase E4O04_12210 IPR002528 Multi antimicrobial extrusion protein E4O04_12215 IPR019264 Domain of unknown function DUF2179 E4O04_12215 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal E4O04_12215 IPR003740 Uncharacterised membrane protein YitT E4O04_12220 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding E4O04_12220 IPR006130 Aspartate/ornithine carbamoyltransferase E4O04_12220 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain E4O04_12220 IPR024904 Ornithine carbamoyltransferase E4O04_12220 IPR002292 Ornithine/putrescine carbamoyltransferase E4O04_12220 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily E4O04_12225 IPR003593 AAA+ ATPase domain E4O04_12225 IPR003439 ABC transporter-like E4O04_12225 IPR017871 ABC transporter, conserved site E4O04_12225 IPR012693 ABC transporter, phosphonate import, PhnC E4O04_12225 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12240 IPR011650 Peptidase M20, dimerisation domain E4O04_12240 IPR010161 Peptidase M20B, tripeptide aminopeptidase E4O04_12240 IPR002933 Peptidase M20 E4O04_12240 IPR036264 Bacterial exopeptidase dimerisation domain E4O04_12240 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site E4O04_12245 IPR018631 AAA-ATPase-like domain E4O04_12245 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_12250 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12250 IPR034739 UvrD/AddA helicase, N-terminal E4O04_12250 IPR005751 ATP-dependent DNA helicase PcrA E4O04_12250 IPR013986 DExx box DNA helicase domain superfamily E4O04_12250 IPR014017 UvrD-like DNA helicase, C-terminal E4O04_12250 IPR000212 DNA helicase, UvrD/REP type E4O04_12250 IPR014016 UvrD-like helicase, ATP-binding domain E4O04_12295 IPR012547 PD-(D/E)XK nuclease superfamily 9 E4O04_12295 IPR018631 AAA-ATPase-like domain E4O04_12310 IPR038657 Ribosomal protein L19 superfamily E4O04_12310 IPR018257 Ribosomal protein L19, conserved site E4O04_12310 IPR001857 Ribosomal protein L19 E4O04_12310 IPR008991 Translation protein SH3-like domain superfamily E4O04_12315 IPR029028 Alpha/beta knot methyltransferases E4O04_12315 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria E4O04_12315 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal E4O04_12315 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E4O04_12315 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain E4O04_12320 IPR011961 16S rRNA processing protein RimM E4O04_12320 IPR011033 PRC-barrel-like superfamily E4O04_12320 IPR002676 RimM, N-terminal E4O04_12320 IPR036976 RimM, N-terminal domain superfamily E4O04_12320 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_12325 IPR020627 Uncharacterised protein family UPF0109 E4O04_12325 IPR015946 K homology domain-like, alpha/beta E4O04_12325 IPR009019 K homology domain superfamily, prokaryotic type E4O04_12330 IPR000307 Ribosomal protein S16 E4O04_12330 IPR023803 Ribosomal protein S16 domain superfamily E4O04_12335 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like E4O04_12335 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal E4O04_12335 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic E4O04_12335 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily E4O04_12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12340 IPR017871 ABC transporter, conserved site E4O04_12340 IPR003593 AAA+ ATPase domain E4O04_12340 IPR003439 ABC transporter-like E4O04_12340 IPR012693 ABC transporter, phosphonate import, PhnC E4O04_12345 IPR003593 AAA+ ATPase domain E4O04_12345 IPR003439 ABC transporter-like E4O04_12345 IPR017871 ABC transporter, conserved site E4O04_12345 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal E4O04_12345 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain E4O04_12345 IPR018449 NIL domain E4O04_12345 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12360 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site E4O04_12360 IPR036986 RNA-binding S4 domain superfamily E4O04_12360 IPR002942 RNA-binding S4 domain E4O04_12360 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F E4O04_12360 IPR006145 Pseudouridine synthase, RsuA/RluA E4O04_12360 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_12360 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain E4O04_12365 IPR005234 Chromosome segregation/condensation protein ScpB E4O04_12365 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_12365 IPR036390 Winged helix DNA-binding domain superfamily E4O04_12370 IPR003768 Segregation and condensation protein A E4O04_12375 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12375 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain E4O04_12375 IPR020584 DNA recombination/repair protein RecA, conserved site E4O04_12375 IPR023400 DNA recombination and repair protein RecA, C-terminal E4O04_12375 IPR013765 DNA recombination and repair protein RecA E4O04_12375 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface E4O04_12375 IPR003593 AAA+ ATPase domain E4O04_12380 IPR006146 5'-Nucleotidase, conserved site E4O04_12380 IPR006179 5'-Nucleotidase/apyrase E4O04_12380 IPR029052 Metallo-dependent phosphatase-like E4O04_12380 IPR019931 LPXTG cell wall anchor domain E4O04_12380 IPR036907 5'-Nucleotidase, C-terminal domain superfamily E4O04_12380 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E4O04_12380 IPR041827 CpdB, N-terminal metallophosphatase domain E4O04_12380 IPR008334 5'-Nucleotidase, C-terminal E4O04_12390 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal E4O04_12390 IPR023753 FAD/NAD(P)-binding domain E4O04_12390 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_12390 IPR013785 Aldolase-type TIM barrel E4O04_12410 IPR016066 Alpha-D-phosphohexomutase, conserved site E4O04_12410 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily E4O04_12410 IPR005843 Alpha-D-phosphohexomutase, C-terminal E4O04_12410 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III E4O04_12410 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II E4O04_12410 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III E4O04_12410 IPR005841 Alpha-D-phosphohexomutase superfamily E4O04_12410 IPR006352 Phosphoglucosamine mutase, bacterial type E4O04_12410 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I E4O04_12415 IPR003416 MgtC/SapB/SrpB/YhiD family E4O04_12435 IPR002942 RNA-binding S4 domain E4O04_12435 IPR036986 RNA-binding S4 domain superfamily E4O04_12435 IPR002307 Tyrosine-tRNA ligase E4O04_12435 IPR024088 Tyrosine-tRNA ligase, bacterial-type E4O04_12435 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 E4O04_12435 IPR002305 Aminoacyl-tRNA synthetase, class Ic E4O04_12435 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E4O04_12435 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_12440 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F E4O04_12440 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain E4O04_12440 IPR020103 Pseudouridine synthase, catalytic domain superfamily E4O04_12440 IPR006145 Pseudouridine synthase, RsuA/RluA E4O04_12440 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site E4O04_12440 IPR002942 RNA-binding S4 domain E4O04_12440 IPR036986 RNA-binding S4 domain superfamily E4O04_12460 IPR001303 Class II aldolase/adducin N-terminal E4O04_12460 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E4O04_12465 IPR011006 CheY-like superfamily E4O04_12465 IPR016032 Signal transduction response regulator, C-terminal effector E4O04_12465 IPR001789 Signal transduction response regulator, receiver domain E4O04_12465 IPR000792 Transcription regulator LuxR, C-terminal E4O04_12465 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_12475 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_12475 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_12475 IPR000754 Ribosomal protein S9 E4O04_12475 IPR023035 Ribosomal protein S9, bacterial/plastid E4O04_12475 IPR020574 Ribosomal protein S9, conserved site E4O04_12480 IPR005822 Ribosomal protein L13 E4O04_12480 IPR005823 Ribosomal protein L13, bacterial-type E4O04_12480 IPR023563 Ribosomal protein L13, conserved site E4O04_12480 IPR036899 Ribosomal protein L13 superfamily E4O04_12495 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_12495 IPR033479 Double Cache domain 1 E4O04_12495 IPR003660 HAMP domain E4O04_12495 IPR029151 Periplasmic sensor-like domain superfamily E4O04_12500 IPR033479 Double Cache domain 1 E4O04_12500 IPR003660 HAMP domain E4O04_12500 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_12500 IPR029151 Periplasmic sensor-like domain superfamily E4O04_12500 IPR000727 Target SNARE coiled-coil homology domain E4O04_12500 IPR033479 Double Cache domain 1 E4O04_12500 IPR003660 HAMP domain E4O04_12500 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_12500 IPR029151 Periplasmic sensor-like domain superfamily E4O04_12500 IPR000727 Target SNARE coiled-coil homology domain E4O04_12515 IPR011004 Trimeric LpxA-like superfamily E4O04_12515 IPR032533 Protein of unknown function DUF4954 E4O04_12525 IPR008279 PEP-utilising enzyme, mobile domain E4O04_12525 IPR040442 Pyruvate kinase-like domain superfamily E4O04_12525 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E4O04_12525 IPR010121 Pyruvate, phosphate dikinase E4O04_12525 IPR013815 ATP-grasp fold, subdomain 1 E4O04_12525 IPR036637 Phosphohistidine domain superfamily E4O04_12525 IPR023151 PEP-utilising enzyme, conserved site E4O04_12525 IPR000121 PEP-utilising enzyme, C-terminal E4O04_12525 IPR018274 PEP-utilising enzyme, active site E4O04_12540 IPR002035 von Willebrand factor, type A E4O04_12540 IPR036465 von Willebrand factor A-like domain superfamily E4O04_12550 IPR001763 Rhodanese-like domain E4O04_12550 IPR036873 Rhodanese-like domain superfamily E4O04_12550 IPR020936 Uncharacterised protein family UPF0176 E4O04_12550 IPR040503 UPF0176, acylphosphatase-like domain E4O04_12555 IPR026902 RnfC Barrel sandwich hybrid domain E4O04_12555 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain E4O04_12555 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC E4O04_12555 IPR009051 Alpha-helical ferredoxin E4O04_12555 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E4O04_12555 IPR019554 Soluble ligand binding domain E4O04_12555 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E4O04_12555 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily E4O04_12560 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD E4O04_12560 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D E4O04_12565 IPR007329 FMN-binding E4O04_12565 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG E4O04_12570 IPR003667 NqrDE/RnfAE E4O04_12570 IPR010968 Ion-translocating oxidoreductase complex subunit E E4O04_12575 IPR003667 NqrDE/RnfAE E4O04_12575 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA E4O04_12585 IPR023358 Peptidase M18, domain 2 E4O04_12585 IPR022984 M18 family aminopeptidase 2, putative E4O04_12585 IPR001948 Peptidase M18 E4O04_12590 IPR020595 MnmG-related, conserved site E4O04_12590 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related E4O04_12590 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG E4O04_12590 IPR026904 GidA associated domain 3 E4O04_12590 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_12595 IPR011009 Protein kinase-like domain superfamily E4O04_12595 IPR002575 Aminoglycoside phosphotransferase E4O04_12595 IPR009212 Methylthioribose kinase E4O04_12600 IPR000649 Initiation factor 2B-related E4O04_12600 IPR005251 Methylthioribose-1-phosphate isomerase E4O04_12600 IPR011559 Initiation factor 2B alpha/beta/delta E4O04_12600 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal E4O04_12600 IPR037171 NagB/RpiA transferase-like E4O04_12610 IPR001303 Class II aldolase/adducin N-terminal E4O04_12610 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E4O04_12615 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme E4O04_12615 IPR006237 L-methionine gamma-lyase E4O04_12615 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_12615 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_12615 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_12620 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site E4O04_12620 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E4O04_12620 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4O04_12620 IPR036291 NAD(P)-binding domain superfamily E4O04_12625 IPR018483 Carbohydrate kinase, FGGY, conserved site E4O04_12625 IPR000577 Carbohydrate kinase, FGGY E4O04_12625 IPR018485 Carbohydrate kinase, FGGY, C-terminal E4O04_12625 IPR018484 Carbohydrate kinase, FGGY, N-terminal E4O04_12630 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase E4O04_12630 IPR013221 Mur ligase, central E4O04_12630 IPR035911 MurE/MurF, N-terminal E4O04_12630 IPR000713 Mur ligase, N-terminal catalytic domain E4O04_12630 IPR036615 Mur ligase, C-terminal domain superfamily E4O04_12630 IPR036565 Mur-like, catalytic domain superfamily E4O04_12630 IPR004101 Mur ligase, C-terminal E4O04_12640 IPR029069 HotDog domain superfamily E4O04_12640 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ E4O04_12640 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ E4O04_12645 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E4O04_12645 IPR009057 Homeobox-like domain superfamily E4O04_12645 IPR001647 DNA-binding HTH domain, TetR-type E4O04_12645 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E4O04_12645 IPR013572 Transcription regulator MAATS, C-terminal E4O04_12660 IPR003439 ABC transporter-like E4O04_12660 IPR003593 AAA+ ATPase domain E4O04_12660 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12660 IPR017871 ABC transporter, conserved site E4O04_12665 IPR003439 ABC transporter-like E4O04_12665 IPR039421 Type I protein exporter E4O04_12665 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12665 IPR011917 ABC transporter, lipid A export, MsbA E4O04_12665 IPR017871 ABC transporter, conserved site E4O04_12665 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_12665 IPR003593 AAA+ ATPase domain E4O04_12665 IPR011527 ABC transporter type 1, transmembrane domain E4O04_12670 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12670 IPR011527 ABC transporter type 1, transmembrane domain E4O04_12670 IPR003439 ABC transporter-like E4O04_12670 IPR003593 AAA+ ATPase domain E4O04_12670 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_12670 IPR039421 Type I protein exporter E4O04_12680 IPR002933 Peptidase M20 E4O04_12680 IPR017439 Amidohydrolase E4O04_12680 IPR036264 Bacterial exopeptidase dimerisation domain E4O04_12680 IPR011650 Peptidase M20, dimerisation domain E4O04_12685 IPR018385 C4-dicarboxylate anaerobic carrier-like E4O04_12690 IPR036390 Winged helix DNA-binding domain superfamily E4O04_12690 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_12690 IPR002577 Helix-turn-helix, HxlR type E4O04_12695 IPR012349 FMN-binding split barrel E4O04_12695 IPR002563 Flavin reductase like domain E4O04_12705 IPR003829 Pirin, N-terminal domain E4O04_12705 IPR008778 Pirin, C-terminal domain E4O04_12705 IPR012093 Pirin E4O04_12705 IPR014710 RmlC-like jelly roll fold E4O04_12705 IPR011051 RmlC-like cupin domain superfamily E4O04_12725 IPR011527 ABC transporter type 1, transmembrane domain E4O04_12725 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_12725 IPR003439 ABC transporter-like E4O04_12725 IPR017871 ABC transporter, conserved site E4O04_12725 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12725 IPR039421 Type I protein exporter E4O04_12725 IPR003593 AAA+ ATPase domain E4O04_12730 IPR005074 Peptidase C39, bacteriocin processing E4O04_12730 IPR039421 Type I protein exporter E4O04_12730 IPR011527 ABC transporter type 1, transmembrane domain E4O04_12730 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_12730 IPR003439 ABC transporter-like E4O04_12730 IPR017871 ABC transporter, conserved site E4O04_12730 IPR005897 Peptidase C39, ABC-type bacteriocin transporter E4O04_12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12730 IPR003593 AAA+ ATPase domain E4O04_12745 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E4O04_12745 IPR004090 Chemotaxis methyl-accepting receptor E4O04_12745 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E4O04_12745 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E4O04_12745 IPR003660 HAMP domain E4O04_12745 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E4O04_12765 IPR021804 Protein of unknown function DUF3375 E4O04_12770 IPR001845 HTH ArsR-type DNA-binding domain E4O04_12770 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_12770 IPR011991 ArsR-like helix-turn-helix domain E4O04_12770 IPR036390 Winged helix DNA-binding domain superfamily E4O04_12785 IPR003439 ABC transporter-like E4O04_12785 IPR017871 ABC transporter, conserved site E4O04_12785 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12785 IPR003593 AAA+ ATPase domain E4O04_12825 IPR010652 Domain of unknown function DUF1232 E4O04_12855 IPR001650 Helicase, C-terminal E4O04_12855 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_12855 IPR000330 SNF2-related, N-terminal domain E4O04_12855 IPR038718 SNF2-like, N-terminal domain superfamily E4O04_12855 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_12875 IPR006119 Resolvase, N-terminal catalytic domain E4O04_12875 IPR006120 Resolvase, HTH domain E4O04_12875 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily E4O04_12875 IPR006118 Recombinase, conserved site E4O04_12875 IPR009057 Homeobox-like domain superfamily E4O04_12890 IPR001233 tRNA-splicing ligase, RtcB E4O04_12890 IPR036025 tRNA-splicing ligase RtcB-like superfamily E4O04_12895 IPR022924 Cardiolipin synthase E4O04_12895 IPR030840 Cardiolipin synthase A E4O04_12895 IPR001736 Phospholipase D/Transphosphatidylase E4O04_12895 IPR025202 Phospholipase D-like domain E4O04_12895 IPR027379 Cardiolipin synthase N-terminal E4O04_12915 IPR036291 NAD(P)-binding domain superfamily E4O04_12915 IPR016040 NAD(P)-binding domain E4O04_12920 IPR036390 Winged helix DNA-binding domain superfamily E4O04_12920 IPR036388 Winged helix-like DNA-binding domain superfamily E4O04_12920 IPR000944 Transcription regulator Rrf2-type E4O04_12935 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily E4O04_12935 IPR030395 Glycerophosphodiester phosphodiesterase domain E4O04_12945 IPR017968 Acylphosphatase, conserved site E4O04_12945 IPR036046 Acylphosphatase-like domain superfamily E4O04_12945 IPR001792 Acylphosphatase-like domain E4O04_12945 IPR020456 Acylphosphatase E4O04_12965 IPR036373 Ribosomal protein L17 superfamily E4O04_12965 IPR000456 Ribosomal protein L17 E4O04_12970 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type E4O04_12970 IPR011773 DNA-directed RNA polymerase, alpha subunit E4O04_12970 IPR036603 RNA polymerase, RBP11-like subunit E4O04_12970 IPR011260 RNA polymerase, alpha subunit, C-terminal E4O04_12970 IPR036643 DNA-directed RNA polymerase, insert domain superfamily E4O04_12970 IPR011262 DNA-directed RNA polymerase, insert domain E4O04_12975 IPR019981 Ribosomal protein S11, bacterial-type E4O04_12975 IPR018102 Ribosomal S11, conserved site E4O04_12975 IPR036967 Ribosomal protein S11 superfamily E4O04_12975 IPR001971 Ribosomal protein S11 E4O04_12980 IPR019980 Ribosomal protein S13, bacterial-type E4O04_12980 IPR018269 Ribosomal protein S13, conserved site E4O04_12980 IPR001892 Ribosomal protein S13 E4O04_12980 IPR010979 Ribosomal protein S13-like, H2TH E4O04_12980 IPR027437 30s ribosomal protein S13, C-terminal E4O04_12985 IPR000473 Ribosomal protein L36 E4O04_12985 IPR035977 Ribosomal protein L36 superfamily E4O04_12990 IPR023201 SecY domain superfamily E4O04_12990 IPR030659 SecY conserved site E4O04_12990 IPR026593 Protein translocase subunit SecY E4O04_12990 IPR002208 SecY/SEC61-alpha family E4O04_12995 IPR036227 Ribosomal L18e/L15P superfamily E4O04_12995 IPR005749 Ribosomal protein L15, bacterial-type E4O04_12995 IPR001196 Ribosomal protein L15, conserved site E4O04_12995 IPR021131 Ribosomal protein L18e/L15P E4O04_12995 IPR030878 Ribosomal protein L15 E4O04_13000 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily E4O04_13000 IPR005996 Ribosomal protein L30, bacterial-type E4O04_13000 IPR018038 Ribosomal protein L30, conserved site E4O04_13000 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain E4O04_13005 IPR000851 Ribosomal protein S5 E4O04_13005 IPR005712 Ribosomal protein S5, bacterial-type E4O04_13005 IPR005324 Ribosomal protein S5, C-terminal E4O04_13005 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_13005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_13005 IPR013810 Ribosomal protein S5, N-terminal E4O04_13005 IPR018192 Ribosomal protein S5, N-terminal, conserved site E4O04_13010 IPR004389 Ribosomal protein L18, bacterial-type E4O04_13010 IPR005484 Ribosomal protein L18 E4O04_13015 IPR000702 Ribosomal protein L6 E4O04_13015 IPR020040 Ribosomal protein L6, alpha-beta domain E4O04_13015 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily E4O04_13015 IPR019906 Ribosomal protein L6, bacterial-type E4O04_13015 IPR002358 Ribosomal protein L6, conserved site E4O04_13020 IPR000630 Ribosomal protein S8 E4O04_13020 IPR035987 Ribosomal protein S8 superfamily E4O04_13025 IPR018271 Ribosomal protein S14, conserved site E4O04_13025 IPR023053 Ribosomal protein S14, type Z E4O04_13025 IPR001209 Ribosomal protein S14 E4O04_13030 IPR022803 Ribosomal protein L5 domain superfamily E4O04_13030 IPR031310 Ribosomal protein L5, N-terminal E4O04_13030 IPR020929 Ribosomal protein L5, conserved site E4O04_13030 IPR031309 Ribosomal protein L5, C-terminal E4O04_13030 IPR020930 Ribosomal protein L5, bacterial-type E4O04_13030 IPR002132 Ribosomal protein L5 E4O04_13035 IPR014722 Ribosomal protein L2, domain 2 E4O04_13035 IPR008991 Translation protein SH3-like domain superfamily E4O04_13035 IPR041988 Ribosomal Protein L26/L24, KOW domain E4O04_13035 IPR003256 Ribosomal protein L24 E4O04_13035 IPR005824 KOW E4O04_13035 IPR005825 Ribosomal protein L24/L26, conserved site E4O04_13040 IPR036853 Ribosomal protein L14 superfamily E4O04_13040 IPR000218 Ribosomal protein L14P E4O04_13040 IPR005745 Ribosomal protein L14P, bacterial-type E4O04_13040 IPR019972 Ribosomal protein L14P, conserved site E4O04_13045 IPR019979 Ribosomal protein S17, conserved site E4O04_13045 IPR000266 Ribosomal protein S17/S11 E4O04_13045 IPR012340 Nucleic acid-binding, OB-fold E4O04_13045 IPR019984 30S ribosomal protein S17 E4O04_13050 IPR001854 Ribosomal protein L29/L35 E4O04_13050 IPR036049 Ribosomal protein L29/L35 superfamily E4O04_13055 IPR016180 Ribosomal protein L10e/L16 E4O04_13055 IPR036920 Ribosomal protein L10e/L16 superfamily E4O04_13055 IPR000114 Ribosomal protein L16 E4O04_13055 IPR020798 Ribosomal protein L16, conserved site E4O04_13060 IPR009019 K homology domain superfamily, prokaryotic type E4O04_13060 IPR015946 K homology domain-like, alpha/beta E4O04_13060 IPR005704 Ribosomal protein S3, bacterial-type E4O04_13060 IPR001351 Ribosomal protein S3, C-terminal E4O04_13060 IPR036419 Ribosomal protein S3, C-terminal domain superfamily E4O04_13060 IPR018280 Ribosomal protein S3, conserved site E4O04_13060 IPR004044 K Homology domain, type 2 E4O04_13060 IPR004087 K Homology domain E4O04_13065 IPR001063 Ribosomal protein L22/L17 E4O04_13065 IPR018260 Ribosomal protein L22/L17, conserved site E4O04_13065 IPR036394 Ribosomal protein L22/L17 superfamily E4O04_13065 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type E4O04_13070 IPR002222 Ribosomal protein S19/S15 E4O04_13070 IPR005732 Ribosomal protein S19, bacterial-type E4O04_13070 IPR023575 Ribosomal protein S19, superfamily E4O04_13070 IPR020934 Ribosomal protein S19 conserved site E4O04_13075 IPR008991 Translation protein SH3-like domain superfamily E4O04_13075 IPR014726 Ribosomal protein L2, domain 3 E4O04_13075 IPR022666 Ribosomal Proteins L2, RNA binding domain E4O04_13075 IPR014722 Ribosomal protein L2, domain 2 E4O04_13075 IPR002171 Ribosomal protein L2 E4O04_13075 IPR005880 Ribosomal protein L2, bacterial/organellar-type E4O04_13075 IPR022669 Ribosomal protein L2, C-terminal E4O04_13075 IPR012340 Nucleic acid-binding, OB-fold E4O04_13080 IPR012678 Ribosomal protein L23/L15e core domain superfamily E4O04_13080 IPR001014 Ribosomal protein L23/L25, conserved site E4O04_13080 IPR013025 Ribosomal protein L25/L23 E4O04_13080 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily E4O04_13085 IPR002136 Ribosomal protein L4/L1e E4O04_13085 IPR013005 50S ribosomal protein uL4 E4O04_13085 IPR023574 Ribosomal protein L4 domain superfamily E4O04_13090 IPR000597 Ribosomal protein L3 E4O04_13090 IPR019926 Ribosomal protein L3, conserved site E4O04_13090 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_13090 IPR019927 Ribosomal protein L3, bacterial/organelle-type E4O04_13095 IPR001848 Ribosomal protein S10 E4O04_13095 IPR018268 Ribosomal protein S10, conserved site E4O04_13095 IPR027486 Ribosomal protein S10 domain E4O04_13095 IPR036838 Ribosomal protein S10 domain superfamily E4O04_13100 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13100 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain E4O04_13100 IPR004161 Translation elongation factor EFTu-like, domain 2 E4O04_13100 IPR033720 Elongation factor Tu, domain 2 E4O04_13100 IPR031157 Tr-type G domain, conserved site E4O04_13100 IPR005225 Small GTP-binding protein domain E4O04_13100 IPR000795 Transcription factor, GTP-binding domain E4O04_13100 IPR009000 Translation protein, beta-barrel domain superfamily E4O04_13100 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal E4O04_13100 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle E4O04_13100 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal E4O04_13110 IPR023828 Peptidase S8, subtilisin, Ser-active site E4O04_13110 IPR034193 Proteinase K-like catalytic domain E4O04_13110 IPR000209 Peptidase S8/S53 domain E4O04_13110 IPR036852 Peptidase S8/S53 domain superfamily E4O04_13110 IPR023827 Peptidase S8, subtilisin, Asp-active site E4O04_13110 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 E4O04_13110 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily E4O04_13110 IPR015500 Peptidase S8, subtilisin-related E4O04_13110 IPR022398 Peptidase S8, subtilisin, His-active site E4O04_13130 IPR000522 ABC transporter, permease protein, BtuC-like E4O04_13130 IPR037294 ABC transporter, BtuC-like E4O04_13135 IPR003439 ABC transporter-like E4O04_13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13135 IPR017871 ABC transporter, conserved site E4O04_13135 IPR003593 AAA+ ATPase domain E4O04_13140 IPR004770 Na+/H+ antiporter NhaC E4O04_13140 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal E4O04_13145 IPR011060 Ribulose-phosphate binding barrel E4O04_13145 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) E4O04_13145 IPR013785 Aldolase-type TIM barrel E4O04_13150 IPR040980 SWI2/SNF2 ATPase E4O04_13150 IPR004473 Restriction endonuclease, type I, HsdR E4O04_13150 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal E4O04_13150 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_13150 IPR021810 Protein of unknown function DUF3387 E4O04_13150 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13170 IPR011931 Tyrosine recombinase XerC E4O04_13170 IPR010998 Integrase/recombinase, N-terminal E4O04_13170 IPR002104 Integrase, catalytic domain E4O04_13170 IPR013762 Integrase-like, catalytic domain superfamily E4O04_13170 IPR011010 DNA breaking-rejoining enzyme, catalytic core E4O04_13170 IPR023009 Tyrosine recombinase XerC/XerD E4O04_13170 IPR004107 Integrase, SAM-like, N-terminal E4O04_13175 IPR000055 Restriction endonuclease, type I, HsdS E4O04_13195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_13195 IPR003356 DNA methylase, adenine-specific E4O04_13195 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily E4O04_13205 IPR013766 Thioredoxin domain E4O04_13205 IPR017937 Thioredoxin, conserved site E4O04_13205 IPR036249 Thioredoxin-like superfamily E4O04_13205 IPR005746 Thioredoxin E4O04_13210 IPR023753 FAD/NAD(P)-binding domain E4O04_13210 IPR036188 FAD/NAD(P)-binding domain superfamily E4O04_13210 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site E4O04_13210 IPR005982 Thioredoxin reductase E4O04_13245 IPR017606 4-hydroxybenzoyl-CoA reductase, gamma subunit E4O04_13245 IPR012675 Beta-grasp domain superfamily E4O04_13245 IPR036010 2Fe-2S ferredoxin-like superfamily E4O04_13245 IPR002888 [2Fe-2S]-binding E4O04_13245 IPR036884 [2Fe-2S]-binding domain superfamily E4O04_13245 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site E4O04_13245 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E4O04_13255 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase E4O04_13255 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_13255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_13255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_13305 IPR006143 RND efflux pump, membrane fusion protein E4O04_13305 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E4O04_13310 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_13310 IPR003593 AAA+ ATPase domain E4O04_13310 IPR011527 ABC transporter type 1, transmembrane domain E4O04_13310 IPR039421 Type I protein exporter E4O04_13310 IPR005074 Peptidase C39, bacteriocin processing E4O04_13310 IPR005897 Peptidase C39, ABC-type bacteriocin transporter E4O04_13310 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13310 IPR017871 ABC transporter, conserved site E4O04_13310 IPR003439 ABC transporter-like E4O04_13350 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain E4O04_13350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_13350 IPR036291 NAD(P)-binding domain superfamily E4O04_13370 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily E4O04_13370 IPR002579 Peptide methionine sulphoxide reductase MrsB E4O04_13370 IPR011057 Mss4-like superfamily E4O04_13370 IPR028427 Peptide methionine sulfoxide reductase E4O04_13370 IPR002569 Peptide methionine sulphoxide reductase MsrA E4O04_13390 IPR001107 Band 7 domain E4O04_13390 IPR036013 Band 7/SPFH domain superfamily E4O04_13390 IPR018080 Band 7/stomatin-like, conserved site E4O04_13390 IPR001972 Stomatin family E4O04_13395 IPR001107 Band 7 domain E4O04_13395 IPR036013 Band 7/SPFH domain superfamily E4O04_13395 IPR018080 Band 7/stomatin-like, conserved site E4O04_13395 IPR001972 Stomatin family E4O04_13415 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13415 IPR017871 ABC transporter, conserved site E4O04_13415 IPR003439 ABC transporter-like E4O04_13415 IPR003593 AAA+ ATPase domain E4O04_13420 IPR029056 Ribokinase-like E4O04_13420 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase E4O04_13420 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase E4O04_13425 IPR017871 ABC transporter, conserved site E4O04_13425 IPR011527 ABC transporter type 1, transmembrane domain E4O04_13425 IPR003593 AAA+ ATPase domain E4O04_13425 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_13425 IPR003439 ABC transporter-like E4O04_13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13430 IPR023382 Adenine nucleotide alpha hydrolase-like domains E4O04_13430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E4O04_13430 IPR004506 tRNA-specific 2-thiouridylase E4O04_13435 IPR009212 Methylthioribose kinase E4O04_13435 IPR002575 Aminoglycoside phosphotransferase E4O04_13435 IPR011009 Protein kinase-like domain superfamily E4O04_13445 IPR033626 Class II PurE E4O04_13445 IPR000031 PurE domain E4O04_13445 IPR035893 PurE domain superfamily E4O04_13445 IPR024694 PurE, prokaryotic type E4O04_13450 IPR028923 SAICAR synthetase/ADE2, N-terminal E4O04_13450 IPR018236 SAICAR synthetase, conserved site E4O04_13455 IPR002347 Short-chain dehydrogenase/reductase SDR E4O04_13455 IPR020904 Short-chain dehydrogenase/reductase, conserved site E4O04_13455 IPR036291 NAD(P)-binding domain superfamily E4O04_13460 IPR012340 Nucleic acid-binding, OB-fold E4O04_13460 IPR011344 Single-stranded DNA-binding protein E4O04_13460 IPR000424 Primosome PriB/single-strand DNA-binding E4O04_13465 IPR003849 Preprotein translocase YajC E4O04_13470 IPR022645 Protein-export membrane protein SecD/SecF, bacterial E4O04_13470 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial E4O04_13470 IPR005791 Protein translocase subunit SecD E4O04_13475 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial E4O04_13475 IPR022645 Protein-export membrane protein SecD/SecF, bacterial E4O04_13475 IPR005665 Protein-export membrane protein SecF, bacterial E4O04_13480 IPR010240 Cysteine desulfurase IscS E4O04_13480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E4O04_13480 IPR015424 Pyridoxal phosphate-dependent transferase E4O04_13480 IPR000192 Aminotransferase class V domain E4O04_13480 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E4O04_13480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E4O04_13480 IPR016454 Cysteine desulfurase E4O04_13490 IPR001455 TusA-like domain E4O04_13490 IPR036868 TusA-like domain superfamily E4O04_13520 IPR013430 Toxin-antitoxin system, antidote protein, HigA E4O04_13520 IPR001387 Cro/C1-type helix-turn-helix domain E4O04_13520 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E4O04_13545 IPR027065 Lon protease E4O04_13545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E4O04_13545 IPR020568 Ribosomal protein S5 domain 2-type fold E4O04_13545 IPR015947 PUA-like superfamily E4O04_13545 IPR008268 Peptidase S16, active site E4O04_13545 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13545 IPR003111 Lon, substrate-binding domain E4O04_13545 IPR004815 Lon protease, bacterial/eukaryotic-type E4O04_13545 IPR027543 Lon protease, bacterial E4O04_13545 IPR008269 Peptidase S16, Lon proteolytic domain E4O04_13545 IPR003593 AAA+ ATPase domain E4O04_13545 IPR003959 ATPase, AAA-type, core E4O04_13555 IPR037284 SUF system FeS cluster assembly, SufBD superfamily E4O04_13555 IPR000825 SUF system FeS cluster assembly, SufBD E4O04_13555 IPR010231 SUF system FeS cluster assembly, SufB E4O04_13560 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13560 IPR010230 FeS cluster assembly SUF system, ATPase SufC E4O04_13560 IPR017871 ABC transporter, conserved site E4O04_13560 IPR003593 AAA+ ATPase domain E4O04_13560 IPR003439 ABC transporter-like E4O04_13590 IPR004679 2-hydroxycarboxylate transporter E4O04_13590 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes E4O04_13595 IPR018043 Sodium:galactoside symporter, conserved site E4O04_13595 IPR001927 Sodium:galactoside symporter E4O04_13595 IPR036259 MFS transporter superfamily E4O04_13595 IPR039672 Lactose permease-like E4O04_13625 IPR004441 RNA methyltransferase TrmH family E4O04_13625 IPR029064 50S ribosomal protein L30e-like E4O04_13625 IPR029028 Alpha/beta knot methyltransferases E4O04_13625 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted E4O04_13625 IPR001537 tRNA/rRNA methyltransferase, SpoU type E4O04_13625 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E4O04_13625 IPR013123 RNA 2-O ribose methyltransferase, substrate binding E4O04_13630 IPR037512 Phosphoglycolate phosphatase, prokaryotic E4O04_13630 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic E4O04_13630 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E4O04_13630 IPR023214 HAD superfamily E4O04_13630 IPR041492 Haloacid dehalogenase-like hydrolase E4O04_13630 IPR006439 HAD hydrolase, subfamily IA E4O04_13630 IPR036412 HAD-like superfamily E4O04_13640 IPR006667 SLC41 divalent cation transporters, integral membrane domain E4O04_13640 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily E4O04_13640 IPR006669 Magnesium transporter MgtE E4O04_13640 IPR038048 Magnesium transporter MgtE, transmembrane domain E4O04_13640 IPR038076 MgtE, N-terminal domain superfamily E4O04_13640 IPR006668 Magnesium transporter, MgtE intracellular domain E4O04_13640 IPR000644 CBS domain E4O04_13650 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E4O04_13650 IPR029028 Alpha/beta knot methyltransferases E4O04_13650 IPR006700 Ribosomal RNA small subunit methyltransferase E E4O04_13670 IPR000577 Carbohydrate kinase, FGGY E4O04_13670 IPR005999 Glycerol kinase E4O04_13670 IPR018484 Carbohydrate kinase, FGGY, N-terminal E4O04_13670 IPR018483 Carbohydrate kinase, FGGY, conserved site E4O04_13670 IPR018485 Carbohydrate kinase, FGGY, C-terminal E4O04_13675 IPR000836 Phosphoribosyltransferase domain E4O04_13675 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain E4O04_13675 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site E4O04_13675 IPR005946 Ribose-phosphate pyrophosphokinase E4O04_13675 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type E4O04_13675 IPR029057 Phosphoribosyltransferase-like E4O04_13680 IPR001789 Signal transduction response regulator, receiver domain E4O04_13680 IPR029787 Nucleotide cyclase E4O04_13680 IPR000160 GGDEF domain E4O04_13680 IPR011006 CheY-like superfamily E4O04_13685 IPR000160 GGDEF domain E4O04_13685 IPR001633 EAL domain E4O04_13685 IPR035919 EAL domain superfamily E4O04_13685 IPR029787 Nucleotide cyclase E4O04_13685 IPR003660 HAMP domain E4O04_13690 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain E4O04_13690 IPR012340 Nucleic acid-binding, OB-fold E4O04_13690 IPR004881 Ribosome biogenesis GTPase RsgA E4O04_13690 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13690 IPR010914 RsgA GTPase domain E4O04_13700 IPR018228 Deoxyribonuclease, TatD-related, conserved site E4O04_13700 IPR015991 Uncharacterised hydrolase TatD-type E4O04_13700 IPR032466 Metal-dependent hydrolase E4O04_13700 IPR001130 TatD family E4O04_13705 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 E4O04_13705 IPR013785 Aldolase-type TIM barrel E4O04_13705 IPR035587 DUS-like, FMN-binding domain E4O04_13705 IPR001269 tRNA-dihydrouridine synthase E4O04_13705 IPR018517 tRNA-dihydrouridine synthase, conserved site E4O04_13745 IPR000055 Restriction endonuclease, type I, HsdS E4O04_13750 IPR004107 Integrase, SAM-like, N-terminal E4O04_13750 IPR010998 Integrase/recombinase, N-terminal E4O04_13750 IPR002104 Integrase, catalytic domain E4O04_13750 IPR013762 Integrase-like, catalytic domain superfamily E4O04_13750 IPR011010 DNA breaking-rejoining enzyme, catalytic core E4O04_13755 IPR000055 Restriction endonuclease, type I, HsdS E4O04_13760 IPR040198 Fido domain-containing protein E4O04_13760 IPR025157 Hemagglutinin repeat E4O04_13760 IPR038765 Papain-like cysteine peptidase superfamily E4O04_13760 IPR012334 Pectin lyase fold E4O04_13760 IPR006473 Peptidase C58, YopT-type domain E4O04_13760 IPR036597 Fido-like domain superfamily E4O04_13760 IPR008638 Filamentous haemagglutinin, N-terminal E4O04_13760 IPR024973 ESPR domain E4O04_13760 IPR011050 Pectin lyase fold/virulence factor E4O04_13760 IPR003812 Fido domain E4O04_13760 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen E4O04_13765 IPR003356 DNA methylase, adenine-specific E4O04_13765 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E4O04_13765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E4O04_13765 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily E4O04_13770 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal E4O04_13770 IPR013670 EcoEI R protein C-terminal domain E4O04_13770 IPR006935 Helicase/UvrB, N-terminal E4O04_13770 IPR014001 Helicase superfamily 1/2, ATP-binding domain E4O04_13770 IPR001650 Helicase, C-terminal E4O04_13770 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13790 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13790 IPR042108 GTPase HflX, N-terminal domain superfamily E4O04_13790 IPR025121 GTPase HflX, N-terminal E4O04_13790 IPR005225 Small GTP-binding protein domain E4O04_13790 IPR030394 HflX-type guanine nucleotide-binding (G) domain E4O04_13790 IPR032305 GTP-binding protein, middle domain E4O04_13790 IPR006073 GTP binding domain E4O04_13790 IPR016496 GTPase HflX E4O04_13805 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related E4O04_13805 IPR036249 Thioredoxin-like superfamily E4O04_13815 IPR003462 Ornithine cyclodeaminase/mu-crystallin E4O04_13815 IPR036291 NAD(P)-binding domain superfamily E4O04_13815 IPR023401 Ornithine cyclodeaminase, N-terminal E4O04_13820 IPR030678 Peptide/nickel binding protein, MppA-type E4O04_13820 IPR000914 Solute-binding protein family 5 domain E4O04_13820 IPR023765 Solute-binding protein family 5, conserved site E4O04_13820 IPR039424 Solute-binding protein family 5 E4O04_13825 IPR005837 Flagellar transport protein FliP E4O04_13825 IPR005838 Type III secretion system inner membrane P protein E4O04_13835 IPR007597 CheC-like protein E4O04_13835 IPR028976 CheC-like superfamily E4O04_13835 IPR012826 Flagellar motor switch FliN E4O04_13835 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb E4O04_13835 IPR001543 Surface presentation of antigen (SpoA) E4O04_13835 IPR036429 SpoA-like superfamily E4O04_13840 IPR001543 Surface presentation of antigen (SpoA) E4O04_13840 IPR036429 SpoA-like superfamily E4O04_13840 IPR028976 CheC-like superfamily E4O04_13840 IPR001689 Flagellar motor switch protein FliM E4O04_13845 IPR005503 Flagellar basal body-associated protein FliL E4O04_13850 IPR025713 Motility protein B, N-terminal domain E4O04_13850 IPR006665 OmpA-like domain E4O04_13850 IPR036737 OmpA-like domain superfamily E4O04_13855 IPR000540 Flagellar motor protein MotA, conserved site E4O04_13855 IPR002898 MotA/TolQ/ExbB proton channel E4O04_13865 IPR011491 Flagellar hook protein FlgE E4O04_13865 IPR037058 Flagellar hook protein FlgE superfamily E4O04_13865 IPR001444 Flagellar basal body rod protein, N-terminal E4O04_13865 IPR019776 Flagellar basal body rod protein, conserved site E4O04_13865 IPR020013 Flagellar hook-basal body protein, FlgE/F/G E4O04_13865 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E4O04_13865 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like E4O04_13870 IPR005648 Flagellar hook capping protein E4O04_13900 IPR024083 Fumarase/histidase, N-terminal E4O04_13900 IPR005921 Histidine ammonia-lyase E4O04_13900 IPR008948 L-Aspartase-like E4O04_13900 IPR022313 Phenylalanine/histidine ammonia-lyases, active site E4O04_13900 IPR001106 Aromatic amino acid lyase E4O04_13905 IPR018093 BCCT transporter, conserved site E4O04_13905 IPR000060 BCCT transporter family E4O04_13910 IPR003777 XdhC- CoxI E4O04_13910 IPR027051 XdhC Rossmann domain E4O04_13920 IPR002888 [2Fe-2S]-binding E4O04_13920 IPR036884 [2Fe-2S]-binding domain superfamily E4O04_13920 IPR036010 2Fe-2S ferredoxin-like superfamily E4O04_13920 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E4O04_13920 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site E4O04_13920 IPR012675 Beta-grasp domain superfamily E4O04_13930 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily E4O04_13930 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding E4O04_13930 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead E4O04_13930 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily E4O04_13935 IPR003593 AAA+ ATPase domain E4O04_13935 IPR003439 ABC transporter-like E4O04_13935 IPR017871 ABC transporter, conserved site E4O04_13935 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13940 IPR037294 ABC transporter, BtuC-like E4O04_13940 IPR000522 ABC transporter, permease protein, BtuC-like E4O04_13965 IPR029058 Alpha/Beta hydrolase fold E4O04_13965 IPR000073 Alpha/beta hydrolase fold-1 E4O04_13965 IPR002410 Peptidase S33 E4O04_13965 IPR005944 Proline iminopeptidase E4O04_13985 IPR039421 Type I protein exporter E4O04_13985 IPR017871 ABC transporter, conserved site E4O04_13985 IPR003439 ABC transporter-like E4O04_13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13985 IPR011527 ABC transporter type 1, transmembrane domain E4O04_13985 IPR003593 AAA+ ATPase domain E4O04_13985 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_13990 IPR027417 P-loop containing nucleoside triphosphate hydrolase E4O04_13990 IPR017871 ABC transporter, conserved site E4O04_13990 IPR003439 ABC transporter-like E4O04_13990 IPR039421 Type I protein exporter E4O04_13990 IPR011527 ABC transporter type 1, transmembrane domain E4O04_13990 IPR003593 AAA+ ATPase domain E4O04_13990 IPR036640 ABC transporter type 1, transmembrane domain superfamily E4O04_14005 IPR035196 Protein of unknown function DUF5312 E4O04_14015 IPR016195 Polymerase/histidinol phosphatase-like E4O04_14015 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain E4O04_14015 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain E4O04_14015 IPR040982 DNA polymerase III alpha subunit finger domain E4O04_14015 IPR029460 DNA polymerase, helix-hairpin-helix motif E4O04_14015 IPR004013 PHP domain E4O04_14015 IPR003141 Polymerase/histidinol phosphatase, N-terminal E4O04_14015 IPR004805 DNA polymerase III, alpha subunit