locus-tag class description ABH09_00005 PF00308 Bacterial dnaA protein ABH09_00005 PF08299 Bacterial dnaA protein helix-turn-helix ABH09_00005 PF11638 DnaA N-terminal domain ABH09_00015 PF01370 NAD dependent epimerase/dehydratase family ABH09_00020 PF00155 Aminotransferase class I and II ABH09_00060 PF01497 Periplasmic binding protein ABH09_00065 PF01032 FecCD transport family ABH09_00070 PF00005 ABC transporter ABH09_00075 PF05958 tRNA (Uracil-5-)-methyltransferase ABH09_00090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABH09_00090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABH09_00095 PF00183 Hsp90 protein ABH09_00100 PF03193 RsgA GTPase ABH09_00105 PF01177 Asp/Glu/Hydantoin racemase ABH09_00110 PF00005 ABC transporter ABH09_00110 PF00664 ABC transporter transmembrane region ABH09_00125 PF08279 HTH domain ABH09_00125 PF13280 WYL domain ABH09_00170 PF00664 ABC transporter transmembrane region ABH09_00170 PF00005 ABC transporter ABH09_00175 PF01554 MatE ABH09_00180 PF00268 Ribonucleotide reductase, small chain ABH09_00215 PF16921 Tex protein YqgF-like domain ABH09_00215 PF09371 Tex-like protein N-terminal domain ABH09_00215 PF17674 HHH domain ABH09_00215 PF00575 S1 RNA binding domain ABH09_00230 PF02698 DUF218 domain ABH09_00275 PF01206 Sulfurtransferase TusA ABH09_00290 PF00171 Aldehyde dehydrogenase family ABH09_00295 PF01261 Xylose isomerase-like TIM barrel ABH09_00300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABH09_00300 PF00205 Thiamine pyrophosphate enzyme, central domain ABH09_00300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABH09_00305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABH09_00305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABH09_00310 PF01116 Fructose-bisphosphate aldolase class-II ABH09_00315 PF00294 pfkB family carbohydrate kinase ABH09_00325 PF00455 DeoR C terminal sensor domain ABH09_00325 PF08220 DeoR-like helix-turn-helix domain ABH09_00330 PF13407 Periplasmic binding protein domain ABH09_00335 PF00005 ABC transporter ABH09_00340 PF02653 Branched-chain amino acid transport system / permease component ABH09_00345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABH09_00345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABH09_00360 PF00534 Glycosyl transferases group 1 ABH09_00360 PF13439 Glycosyltransferase Family 4 ABH09_00365 PF12848 ABC transporter ABH09_00365 PF00005 ABC transporter ABH09_00385 PF12368 Rhodanase C-terminal ABH09_00385 PF00581 Rhodanese-like domain ABH09_00385 PF17773 UPF0176 acylphosphatase like domain ABH09_00390 PF00557 Metallopeptidase family M24 ABH09_00395 PF00226 DnaJ domain ABH09_00395 PF01556 DnaJ C terminal domain ABH09_00395 PF00684 DnaJ central domain ABH09_00410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABH09_00410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABH09_00410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABH09_00410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABH09_00415 PF04225 Opacity-associated protein A LysM-like domain ABH09_00415 PF01551 Peptidase family M23 ABH09_00420 PF01554 MatE ABH09_00435 PF00005 ABC transporter ABH09_00450 PF07669 Eco57I restriction-modification methylase ABH09_00560 PF03553 Na+/H+ antiporter family ABH09_00565 PF00990 Diguanylate cyclase, GGDEF domain ABH09_00570 PF00990 Diguanylate cyclase, GGDEF domain ABH09_00595 PF13361 UvrD-like helicase C-terminal domain ABH09_00595 PF00580 UvrD/REP helicase N-terminal domain ABH09_00595 PF12705 PD-(D/E)XK nuclease superfamily ABH09_00600 PF13411 MerR HTH family regulatory protein ABH09_00600 PF00145 C-5 cytosine-specific DNA methylase ABH09_00645 PF03144 Elongation factor Tu domain 2 ABH09_00645 PF00009 Elongation factor Tu GTP binding domain ABH09_00645 PF00679 Elongation factor G C-terminus ABH09_00645 PF14492 Elongation Factor G, domain II ABH09_00645 PF03764 Elongation factor G, domain IV ABH09_00650 PF12833 Helix-turn-helix domain ABH09_00650 PF02311 AraC-like ligand binding domain ABH09_00665 PF00005 ABC transporter ABH09_00670 PF01106 NifU-like domain ABH09_00685 PF02446 4-alpha-glucanotransferase ABH09_00690 PF00005 ABC transporter ABH09_00690 PF00664 ABC transporter transmembrane region ABH09_00695 PF00005 ABC transporter ABH09_00695 PF00664 ABC transporter transmembrane region ABH09_00700 PF00403 Heavy-metal-associated domain ABH09_00705 PF01022 Bacterial regulatory protein, arsR family ABH09_00720 PF00403 Heavy-metal-associated domain ABH09_00740 PF05524 PEP-utilising enzyme, N-terminal ABH09_00740 PF00391 PEP-utilising enzyme, mobile domain ABH09_00740 PF02896 PEP-utilising enzyme, TIM barrel domain ABH09_00755 PF01926 50S ribosome-binding GTPase ABH09_00755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABH09_00770 PF04539 Sigma-70 region 3 ABH09_00770 PF04545 Sigma-70, region 4 ABH09_00770 PF04542 Sigma-70 region 2 ABH09_00790 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABH09_00790 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ABH09_00790 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABH09_00840 PF03030 Inorganic H+ pyrophosphatase ABH09_00845 PF00579 tRNA synthetases class I (W and Y) ABH09_00850 PF01027 Inhibitor of apoptosis-promoting Bax1 ABH09_00870 PF03793 PASTA domain ABH09_00870 PF03717 Penicillin-binding Protein dimerisation domain ABH09_00870 PF00905 Penicillin binding protein transpeptidase domain ABH09_00875 PF10502 Signal peptidase, peptidase S26 ABH09_01215 PF00271 Helicase conserved C-terminal domain ABH09_01215 PF03461 TRCF domain ABH09_01215 PF17757 UvrB interaction domain ABH09_01215 PF02559 CarD-like/TRCF domain ABH09_01215 PF00270 DEAD/DEAH box helicase ABH09_01220 PF13545 Crp-like helix-turn-helix domain ABH09_01220 PF00027 Cyclic nucleotide-binding domain ABH09_01230 PF02811 PHP domain ABH09_01240 PF09338 Glycine/sarcosine/betaine reductase component B subunits ABH09_01255 PF01713 Smr domain ABH09_01255 PF00488 MutS domain V ABH09_01265 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABH09_01265 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABH09_01265 PF02772 S-adenosylmethionine synthetase, central domain ABH09_01310 PF00436 Single-strand binding protein family ABH09_01320 PF00390 Malic enzyme, N-terminal domain ABH09_01320 PF03949 Malic enzyme, NAD binding domain ABH09_01325 PF00056 lactate/malate dehydrogenase, NAD binding domain ABH09_01325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABH09_01365 PF01008 Initiation factor 2 subunit family ABH09_01375 PF00270 DEAD/DEAH box helicase ABH09_01375 PF00271 Helicase conserved C-terminal domain ABH09_01395 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_01400 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_01410 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_01415 PF00005 ABC transporter ABH09_01415 PF09383 NIL domain ABH09_01420 PF00595 PDZ domain ABH09_01425 PF00211 Adenylate and Guanylate cyclase catalytic domain ABH09_01430 PF01368 DHH family ABH09_01430 PF17768 RecJ OB domain ABH09_01430 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ABH09_01430 PF02272 DHHA1 domain ABH09_01435 PF02885 Glycosyl transferase family, helical bundle domain ABH09_01435 PF00591 Glycosyl transferase family, a/b domain ABH09_01435 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ABH09_01440 PF08543 Phosphomethylpyrimidine kinase ABH09_01455 PF01171 PP-loop family ABH09_01475 PF01381 Helix-turn-helix ABH09_01475 PF00145 C-5 cytosine-specific DNA methylase ABH09_01480 PF03471 Transporter associated domain ABH09_01480 PF00999 Sodium/hydrogen exchanger family ABH09_01480 PF02080 TrkA-C domain ABH09_01490 PF02872 5'-nucleotidase, C-terminal domain ABH09_01490 PF00149 Calcineurin-like phosphoesterase ABH09_01500 PF02743 Cache domain ABH09_01500 PF00672 HAMP domain ABH09_01500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_01505 PF02743 Cache domain ABH09_01505 PF00672 HAMP domain ABH09_01505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_01510 PF03577 Peptidase family C69 ABH09_01515 PF02743 Cache domain ABH09_01515 PF00672 HAMP domain ABH09_01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_01525 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABH09_01530 PF01039 Carboxyl transferase domain ABH09_01535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABH09_01535 PF00289 Biotin carboxylase, N-terminal domain ABH09_01535 PF02785 Biotin carboxylase C-terminal domain ABH09_01540 PF00364 Biotin-requiring enzyme ABH09_01545 PF07055 Enoyl reductase FAD binding domain ABH09_01545 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ABH09_01545 PF12241 Trans-2-enoyl-CoA reductase catalytic region ABH09_01550 PF10531 SLBB domain ABH09_01550 PF13375 RnfC Barrel sandwich hybrid domain ABH09_01550 PF13237 4Fe-4S dicluster domain ABH09_01550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABH09_01555 PF03116 NQR2, RnfD, RnfE family ABH09_01560 PF04205 FMN-binding domain ABH09_01565 PF02508 Rnf-Nqr subunit, membrane protein ABH09_01570 PF02508 Rnf-Nqr subunit, membrane protein ABH09_01575 PF04060 Putative Fe-S cluster ABH09_01580 PF01926 50S ribosome-binding GTPase ABH09_01580 PF07650 KH domain ABH09_01585 PF00950 ABC 3 transport family ABH09_01590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABH09_01590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABH09_01595 PF07687 Peptidase dimerisation domain ABH09_01595 PF01546 Peptidase family M20/M25/M40 ABH09_01605 PF04536 TPM domain ABH09_01615 PF00380 Ribosomal protein S9/S16 ABH09_01620 PF00572 Ribosomal protein L13 ABH09_01635 PF02810 SEC-C motif ABH09_01635 PF07517 SecA DEAD-like domain ABH09_01635 PF01043 SecA preprotein cross-linking domain ABH09_01635 PF07516 SecA Wing and Scaffold domain ABH09_01640 PF07687 Peptidase dimerisation domain ABH09_01640 PF01546 Peptidase family M20/M25/M40 ABH09_01645 PF00578 AhpC/TSA family ABH09_01645 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABH09_01650 PF00707 Translation initiation factor IF-3, C-terminal domain ABH09_01650 PF05198 Translation initiation factor IF-3, N-terminal domain ABH09_01655 PF01632 Ribosomal protein L35 ABH09_01660 PF00453 Ribosomal protein L20 ABH09_01670 PF05164 Cell division protein ZapA ABH09_01675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABH09_01680 PF00072 Response regulator receiver domain ABH09_01685 PF01546 Peptidase family M20/M25/M40 ABH09_01685 PF07687 Peptidase dimerisation domain ABH09_01690 PF01235 Sodium:alanine symporter family ABH09_01695 PF00364 Biotin-requiring enzyme ABH09_01695 PF00682 HMGL-like ABH09_01695 PF02436 Conserved carboxylase domain ABH09_01700 PF00933 Glycosyl hydrolase family 3 N terminal domain ABH09_01705 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ ABH09_01720 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABH09_01720 PF02558 Ketopantoate reductase PanE/ApbA ABH09_01735 PF00005 ABC transporter ABH09_01735 PF13732 Domain of unknown function (DUF4162) ABH09_01755 PF12002 MgsA AAA+ ATPase C terminal ABH09_01755 PF16193 AAA C-terminal domain ABH09_01755 PF00004 ATPase family associated with various cellular activities (AAA) ABH09_01765 PF13505 Outer membrane protein beta-barrel domain ABH09_01790 PF10531 SLBB domain ABH09_01790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABH09_01790 PF13237 4Fe-4S dicluster domain ABH09_01790 PF13375 RnfC Barrel sandwich hybrid domain ABH09_01800 PF02681 Divergent PAP2 family ABH09_01805 PF00588 SpoU rRNA Methylase family ABH09_01805 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABH09_01820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABH09_01825 PF02625 XdhC and CoxI family ABH09_01825 PF13478 XdhC Rossmann domain ABH09_01840 PF00005 ABC transporter ABH09_01845 PF08668 HDOD domain ABH09_01850 PF00970 Oxidoreductase FAD-binding domain ABH09_01850 PF00175 Oxidoreductase NAD-binding domain ABH09_01850 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ABH09_01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABH09_01855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABH09_01860 PF01212 Beta-eliminating lyase ABH09_01865 PF00209 Sodium:neurotransmitter symporter family ABH09_01870 PF02608 ABC transporter substrate-binding protein PnrA-like ABH09_01875 PF00005 ABC transporter ABH09_01880 PF02653 Branched-chain amino acid transport system / permease component ABH09_01885 PF02653 Branched-chain amino acid transport system / permease component ABH09_01890 PF12728 Helix-turn-helix domain ABH09_01890 PF02661 Fic/DOC family ABH09_01900 PF00255 Glutathione peroxidase ABH09_01905 PF00288 GHMP kinases N terminal domain ABH09_01905 PF10509 Galactokinase galactose-binding signature ABH09_01905 PF08544 GHMP kinases C terminal ABH09_01915 PF00571 CBS domain ABH09_01915 PF03471 Transporter associated domain ABH09_01915 PF01595 Cyclin M transmembrane N-terminal domain ABH09_01920 PF00571 CBS domain ABH09_01920 PF03471 Transporter associated domain ABH09_01920 PF01595 Cyclin M transmembrane N-terminal domain ABH09_01930 PF13416 Bacterial extracellular solute-binding protein ABH09_01935 PF10431 C-terminal, D2-small domain, of ClpB protein ABH09_01935 PF02861 Clp amino terminal domain, pathogenicity island component ABH09_01935 PF00004 ATPase family associated with various cellular activities (AAA) ABH09_01935 PF07724 AAA domain (Cdc48 subfamily) ABH09_01935 PF17871 AAA lid domain ABH09_01960 PF09820 Predicted AAA-ATPase ABH09_01960 PF08011 PD-(D/E)XK nuclease superfamily ABH09_01965 PF01479 S4 domain ABH09_01965 PF00849 RNA pseudouridylate synthase ABH09_01975 PF13439 Glycosyltransferase Family 4 ABH09_01975 PF00534 Glycosyl transferases group 1 ABH09_01980 PF00271 Helicase conserved C-terminal domain ABH09_01980 PF00270 DEAD/DEAH box helicase ABH09_01985 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABH09_01985 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABH09_01990 PF00698 Acyl transferase domain ABH09_02000 PF02801 Beta-ketoacyl synthase, C-terminal domain ABH09_02000 PF00109 Beta-ketoacyl synthase, N-terminal domain ABH09_02005 PF07977 FabA-like domain ABH09_02010 PF12146 Serine aminopeptidase, S33 ABH09_02060 PF16657 Maltogenic Amylase, C-terminal domain ABH09_02060 PF02903 Alpha amylase, N-terminal ig-like domain ABH09_02060 PF00128 Alpha amylase, catalytic domain ABH09_02070 PF00440 Bacterial regulatory proteins, tetR family ABH09_02085 PF02542 YgbB family ABH09_02090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABH09_02090 PF02542 YgbB family ABH09_02120 PF00210 Ferritin-like domain ABH09_02125 PF00468 Ribosomal protein L34 ABH09_02135 PF01809 Putative membrane protein insertion efficiency factor ABH09_02140 PF14849 YidC periplasmic domain ABH09_02140 PF02096 60Kd inner membrane protein ABH09_02145 PF14804 Jag N-terminus ABH09_02145 PF01424 R3H domain ABH09_02155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABH09_02160 PF02699 Preprotein translocase subunit ABH09_02165 PF02355 Protein export membrane protein ABH09_02170 PF02355 Protein export membrane protein ABH09_02175 PF00156 Phosphoribosyl transferase domain ABH09_02185 PF00448 SRP54-type protein, GTPase domain ABH09_02185 PF02881 SRP54-type protein, helical bundle domain ABH09_02185 PF02978 Signal peptide binding domain ABH09_02190 PF00334 Nucleoside diphosphate kinase ABH09_02195 PF00343 Carbohydrate phosphorylase ABH09_02200 PF00128 Alpha amylase, catalytic domain ABH09_02200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABH09_02210 PF07475 HPr Serine kinase C-terminal domain ABH09_02210 PF02603 HPr Serine kinase N terminus ABH09_02215 PF00381 PTS HPr component phosphorylation site ABH09_02225 PF01921 tRNA synthetases class I (K) ABH09_02240 PF00209 Sodium:neurotransmitter symporter family ABH09_02275 PF02875 Mur ligase family, glutamate ligase domain ABH09_02275 PF08245 Mur ligase middle domain ABH09_02275 PF01225 Mur ligase family, catalytic domain ABH09_02295 PF00730 HhH-GPD superfamily base excision DNA repair protein ABH09_02315 PF03781 Sulfatase-modifying factor enzyme 1 ABH09_02335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABH09_02335 PF05698 Bacterial trigger factor protein (TF) C-terminus ABH09_02335 PF05697 Bacterial trigger factor protein (TF) ABH09_02340 PF00574 Clp protease ABH09_02345 PF07724 AAA domain (Cdc48 subfamily) ABH09_02345 PF06689 ClpX C4-type zinc finger ABH09_02345 PF10431 C-terminal, D2-small domain, of ClpB protein ABH09_02355 PF01225 Mur ligase family, catalytic domain ABH09_02355 PF08245 Mur ligase middle domain ABH09_02355 PF02875 Mur ligase family, glutamate ligase domain ABH09_02360 PF02311 AraC-like ligand binding domain ABH09_02360 PF12833 Helix-turn-helix domain ABH09_02375 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_02380 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_02390 PF00440 Bacterial regulatory proteins, tetR family ABH09_02390 PF08361 MAATS-type transcriptional repressor, C-terminal region ABH09_02405 PF00005 ABC transporter ABH09_02450 PF06421 GTP-binding protein LepA C-terminus ABH09_02450 PF00009 Elongation factor Tu GTP binding domain ABH09_02450 PF14492 Elongation Factor G, domain II ABH09_02450 PF03144 Elongation factor Tu domain 2 ABH09_02450 PF00679 Elongation factor G C-terminus ABH09_02475 PF03485 Arginyl tRNA synthetase N terminal domain ABH09_02475 PF00750 tRNA synthetases class I (R) ABH09_02475 PF05746 DALR anticodon binding domain ABH09_02485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABH09_02485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABH09_02490 PF00696 Amino acid kinase family ABH09_02495 PF03606 C4-dicarboxylate anaerobic carrier ABH09_02500 PF08245 Mur ligase middle domain ABH09_02500 PF02875 Mur ligase family, glutamate ligase domain ABH09_02505 PF00156 Phosphoribosyl transferase domain ABH09_02510 PF00152 tRNA synthetases class II (D, K and N) ABH09_02510 PF01336 OB-fold nucleic acid binding domain ABH09_02610 PF04324 BFD-like [2Fe-2S] binding domain ABH09_02610 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABH09_02615 PF01266 FAD dependent oxidoreductase ABH09_02620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABH09_02620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABH09_02625 PF07478 D-ala D-ala ligase C-terminus ABH09_02625 PF01820 D-ala D-ala ligase N-terminus ABH09_02635 PF07238 PilZ domain ABH09_02655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABH09_02660 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_02665 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_02665 PF12911 N-terminal TM domain of oligopeptide transport permease C ABH09_02670 PF00005 ABC transporter ABH09_02670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_02675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_02675 PF00005 ABC transporter ABH09_02680 PF00664 ABC transporter transmembrane region ABH09_02680 PF00005 ABC transporter ABH09_02685 PF00664 ABC transporter transmembrane region ABH09_02685 PF00005 ABC transporter ABH09_02690 PF02504 Fatty acid synthesis protein ABH09_02695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABH09_02705 PF09297 NADH pyrophosphatase zinc ribbon domain ABH09_02705 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ABH09_02705 PF00293 NUDIX domain ABH09_02715 PF00391 PEP-utilising enzyme, mobile domain ABH09_02715 PF00224 Pyruvate kinase, barrel domain ABH09_02715 PF02887 Pyruvate kinase, alpha/beta domain ABH09_02720 PF00375 Sodium:dicarboxylate symporter family ABH09_02725 PF02127 Aminopeptidase I zinc metalloprotease (M18) ABH09_02750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABH09_02750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABH09_02755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABH09_02760 PF13173 AAA domain ABH09_02760 PF13635 Domain of unknown function (DUF4143) ABH09_02765 PF00132 Bacterial transferase hexapeptide (six repeats) ABH09_02770 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABH09_02785 PF02350 UDP-N-acetylglucosamine 2-epimerase ABH09_02790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABH09_02790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABH09_02790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABH09_02805 PF00535 Glycosyl transferase family 2 ABH09_02810 PF00534 Glycosyl transferases group 1 ABH09_02810 PF13439 Glycosyltransferase Family 4 ABH09_02815 PF01370 NAD dependent epimerase/dehydratase family ABH09_02840 PF03960 ArsC family ABH09_02900 PF05362 Lon protease (S16) C-terminal proteolytic domain ABH09_02900 PF00004 ATPase family associated with various cellular activities (AAA) ABH09_02900 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABH09_02905 PF13614 AAA domain ABH09_02910 PF02195 ParB-like nuclease domain ABH09_02910 PF17762 HTH domain found in ParB protein ABH09_02920 PF00474 Sodium:solute symporter family ABH09_02925 PF00013 KH domain ABH09_02925 PF01966 HD domain ABH09_02925 PF12072 Domain of unknown function (DUF3552) ABH09_02950 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ABH09_03005 PF01555 DNA methylase ABH09_03040 PF01934 Protein of unknown function DUF86 ABH09_03060 PF00871 Acetokinase family ABH09_03070 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ABH09_03075 PF01381 Helix-turn-helix ABH09_03085 PF02403 Seryl-tRNA synthetase N-terminal domain ABH09_03085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABH09_03090 PF03840 Preprotein translocase SecG subunit ABH09_03095 PF00990 Diguanylate cyclase, GGDEF domain ABH09_03095 PF00360 Phytochrome region ABH09_03095 PF00563 EAL domain ABH09_03095 PF01590 GAF domain ABH09_03100 PF03764 Elongation factor G, domain IV ABH09_03100 PF00009 Elongation factor Tu GTP binding domain ABH09_03100 PF03144 Elongation factor Tu domain 2 ABH09_03100 PF14492 Elongation Factor G, domain II ABH09_03100 PF00679 Elongation factor G C-terminus ABH09_03105 PF00365 Phosphofructokinase ABH09_03110 PF13393 Histidyl-tRNA synthetase ABH09_03115 PF00575 S1 RNA binding domain ABH09_03120 PF00158 Sigma-54 interaction domain ABH09_03120 PF00072 Response regulator receiver domain ABH09_03120 PF02954 Bacterial regulatory protein, Fis family ABH09_03135 PF02743 Cache domain ABH09_03135 PF00672 HAMP domain ABH09_03135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_03140 PF00672 HAMP domain ABH09_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_03175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABH09_03175 PF07196 Flagellin hook IN motif ABH09_03180 PF00669 Bacterial flagellin N-terminal helical region ABH09_03180 PF00700 Bacterial flagellin C-terminal helical region ABH09_03185 PF02623 FliW protein ABH09_03190 PF02599 Global regulator protein family ABH09_03195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABH09_03195 PF00460 Flagella basal body rod protein ABH09_03200 PF00460 Flagella basal body rod protein ABH09_03200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABH09_03205 PF10135 Rod binding protein ABH09_03220 PF00005 ABC transporter ABH09_03225 PF01032 FecCD transport family ABH09_03240 PF13649 Methyltransferase domain ABH09_03255 PF00551 Formyl transferase ABH09_03255 PF02911 Formyl transferase, C-terminal domain ABH09_03260 PF01327 Polypeptide deformylase ABH09_03280 PF00113 Enolase, C-terminal TIM barrel domain ABH09_03280 PF03952 Enolase, N-terminal domain ABH09_03285 PF01042 Endoribonuclease L-PSP ABH09_03300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABH09_03305 PF00829 Ribosomal prokaryotic L21 protein ABH09_03315 PF01016 Ribosomal L27 protein ABH09_03320 PF01018 GTP1/OBG ABH09_03320 PF01926 50S ribosome-binding GTPase ABH09_03325 PF01467 Cytidylyltransferase-like ABH09_03330 PF01467 Cytidylyltransferase-like ABH09_03330 PF01966 HD domain ABH09_03350 PF02576 RimP N-terminal domain ABH09_03350 PF17384 RimP C-terminal SH3 domain ABH09_03355 PF13184 NusA-like KH domain ABH09_03355 PF08529 NusA N-terminal domain ABH09_03355 PF00575 S1 RNA binding domain ABH09_03360 PF11987 Translation-initiation factor 2 ABH09_03360 PF04760 Translation initiation factor IF-2, N-terminal region ABH09_03360 PF00009 Elongation factor Tu GTP binding domain ABH09_03365 PF02033 Ribosome-binding factor A ABH09_03370 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABH09_03370 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABH09_03375 PF01687 Riboflavin kinase ABH09_03375 PF06574 FAD synthetase ABH09_03380 PF00312 Ribosomal protein S15 ABH09_03385 PF00013 KH domain ABH09_03385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABH09_03385 PF03725 3' exoribonuclease family, domain 2 ABH09_03385 PF00575 S1 RNA binding domain ABH09_03385 PF01138 3' exoribonuclease family, domain 1 ABH09_03390 PF00692 dUTPase ABH09_03405 PF00672 HAMP domain ABH09_03405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_03410 PF00571 CBS domain ABH09_03410 PF03471 Transporter associated domain ABH09_03425 PF00672 HAMP domain ABH09_03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_03425 PF02743 Cache domain ABH09_03435 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) ABH09_03435 PF07581 The GLUG motif ABH09_03440 PF13419 Haloacid dehalogenase-like hydrolase ABH09_03445 PF00892 EamA-like transporter family ABH09_03450 PF12683 Protein of unknown function (DUF3798) ABH09_03455 PF00005 ABC transporter ABH09_03475 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABH09_03475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABH09_03475 PF14579 Helix-hairpin-helix motif ABH09_03475 PF02811 PHP domain ABH09_03480 PF02325 YGGT family ABH09_03495 PF02653 Branched-chain amino acid transport system / permease component ABH09_03500 PF00005 ABC transporter ABH09_03510 PF18610 Periplasmic binding protein domain ABH09_03510 PF13407 Periplasmic binding protein domain ABH09_03520 PF00271 Helicase conserved C-terminal domain ABH09_03520 PF00270 DEAD/DEAH box helicase ABH09_03520 PF17191 RecG wedge domain ABH09_03530 PF16325 Peptidase family U32 C-terminal domain ABH09_03530 PF01136 Peptidase family U32 ABH09_03535 PF07859 alpha/beta hydrolase fold ABH09_03540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABH09_03545 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_03550 PF12911 N-terminal TM domain of oligopeptide transport permease C ABH09_03550 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_03555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_03555 PF00005 ABC transporter ABH09_03560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_03560 PF00005 ABC transporter ABH09_03565 PF01343 Peptidase family S49 ABH09_03585 PF08281 Sigma-70, region 4 ABH09_03585 PF04542 Sigma-70 region 2 ABH09_03605 PF00830 Ribosomal L28 family ABH09_03610 PF01368 DHH family ABH09_03610 PF02272 DHHA1 domain ABH09_03620 PF00849 RNA pseudouridylate synthase ABH09_03620 PF01479 S4 domain ABH09_03625 PF01541 GIY-YIG catalytic domain ABH09_03625 PF02151 UvrB/uvrC motif ABH09_03625 PF08459 UvrC Helix-hairpin-helix N-terminal ABH09_03645 PF00483 Nucleotidyl transferase ABH09_03675 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ABH09_03685 PF00005 ABC transporter ABH09_03685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_03690 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_03690 PF12911 N-terminal TM domain of oligopeptide transport permease C ABH09_03695 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_03700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABH09_03710 PF02502 Ribose/Galactose Isomerase ABH09_03720 PF04954 Siderophore-interacting protein ABH09_03720 PF00664 ABC transporter transmembrane region ABH09_03720 PF00005 ABC transporter ABH09_03720 PF08021 Siderophore-interacting FAD-binding domain ABH09_03725 PF00005 ABC transporter ABH09_03725 PF00664 ABC transporter transmembrane region ABH09_03740 PF00005 ABC transporter ABH09_03760 PF04229 GrpB protein ABH09_03760 PF13673 Acetyltransferase (GNAT) domain ABH09_03765 PF09820 Predicted AAA-ATPase ABH09_03765 PF08011 PD-(D/E)XK nuclease superfamily ABH09_03790 PF01661 Macro domain ABH09_03805 PF03963 Flagellar hook capping protein - N-terminal region ABH09_03810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABH09_03810 PF00460 Flagella basal body rod protein ABH09_03810 PF07559 Flagellar basal body protein FlaE ABH09_03820 PF01618 MotA/TolQ/ExbB proton channel family ABH09_03825 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABH09_03825 PF00691 OmpA family ABH09_03830 PF03748 Flagellar basal body-associated protein FliL ABH09_03835 PF02154 Flagellar motor switch protein FliM ABH09_03835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABH09_03840 PF04509 CheC-like family ABH09_03840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABH09_03850 PF00813 FliP family ABH09_03855 PF01313 Bacterial export proteins, family 3 ABH09_03860 PF01311 Bacterial export proteins, family 1 ABH09_03865 PF01312 FlhB HrpN YscU SpaS Family ABH09_03870 PF00771 FHIPEP family ABH09_03875 PF00448 SRP54-type protein, GTPase domain ABH09_03880 PF10609 NUBPL iron-transfer P-loop NTPase ABH09_03885 PF01554 MatE ABH09_03895 PF00773 RNB domain ABH09_03900 PF02127 Aminopeptidase I zinc metalloprotease (M18) ABH09_03910 PF02625 XdhC and CoxI family ABH09_03910 PF13478 XdhC Rossmann domain ABH09_03915 PF10458 Valyl tRNA synthetase tRNA binding arm ABH09_03915 PF00133 tRNA synthetases class I (I, L, M and V) ABH09_03915 PF08264 Anticodon-binding domain of tRNA ABH09_03935 PF01973 Protein of unknown function DUF115 ABH09_03960 PF02899 Phage integrase, N-terminal SAM-like domain ABH09_03960 PF00589 Phage integrase family ABH09_03965 PF01131 DNA topoisomerase ABH09_03965 PF01751 Toprim domain ABH09_03965 PF01396 Topoisomerase DNA binding C4 zinc finger ABH09_03970 PF02481 DNA recombination-mediator protein A ABH09_03970 PF17782 DprA winged helix domain ABH09_03980 PF00999 Sodium/hydrogen exchanger family ABH09_03985 PF01168 Alanine racemase, N-terminal domain ABH09_03985 PF00842 Alanine racemase, C-terminal domain ABH09_03990 PF03239 Iron permease FTR1 family ABH09_03995 PF10634 Fe2+ transport protein ABH09_04010 PF02687 FtsX-like permease family ABH09_04010 PF00005 ABC transporter ABH09_04010 PF12704 MacB-like periplasmic core domain ABH09_04015 PF00005 ABC transporter ABH09_04025 PF00005 ABC transporter ABH09_04030 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_04050 PF00849 RNA pseudouridylate synthase ABH09_04050 PF01479 S4 domain ABH09_04055 PF01709 Transcriptional regulator ABH09_04065 PF03120 NAD-dependent DNA ligase OB-fold domain ABH09_04065 PF01653 NAD-dependent DNA ligase adenylation domain ABH09_04065 PF00533 BRCA1 C Terminus (BRCT) domain ABH09_04070 PF00270 DEAD/DEAH box helicase ABH09_04070 PF00271 Helicase conserved C-terminal domain ABH09_04070 PF00570 HRDC domain ABH09_04070 PF16124 RecQ zinc-binding ABH09_04070 PF09382 RQC domain ABH09_04075 PF01048 Phosphorylase superfamily ABH09_04120 PF09028 Mac 1 ABH09_04150 PF00005 ABC transporter ABH09_04180 PF00133 tRNA synthetases class I (I, L, M and V) ABH09_04180 PF08264 Anticodon-binding domain of tRNA ABH09_04200 PF09856 Predicted transcriptional regulator (DUF2083) ABH09_04200 PF06114 IrrE N-terminal-like domain ABH09_04200 PF01381 Helix-turn-helix ABH09_04215 PF00589 Phage integrase family ABH09_04215 PF02899 Phage integrase, N-terminal SAM-like domain ABH09_04240 PF05973 Phage derived protein Gp49-like (DUF891) ABH09_04260 PF00795 Carbon-nitrogen hydrolase ABH09_04280 PF00589 Phage integrase family ABH09_04280 PF02899 Phage integrase, N-terminal SAM-like domain ABH09_04305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABH09_04305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABH09_04320 PF00521 DNA gyrase/topoisomerase IV, subunit A ABH09_04320 PF03989 DNA gyrase C-terminal domain, beta-propeller ABH09_04325 PF00986 DNA gyrase B subunit, carboxyl terminus ABH09_04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABH09_04325 PF01751 Toprim domain ABH09_04325 PF00204 DNA gyrase B ABH09_04335 PF00274 Fructose-bisphosphate aldolase class-I ABH09_04340 PF00465 Iron-containing alcohol dehydrogenase ABH09_04345 PF02424 ApbE family ABH09_04360 PF03180 NLPA lipoprotein ABH09_04365 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABH09_04365 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABH09_04370 PF01026 TatD related DNase ABH09_04375 PF01207 Dihydrouridine synthase (Dus) ABH09_04400 PF08239 Bacterial SH3 domain ABH09_04405 PF00005 ABC transporter ABH09_04405 PF12848 ABC transporter ABH09_04405 PF16326 ABC transporter C-terminal domain ABH09_04410 PF02677 Epoxyqueuosine reductase QueH ABH09_04420 PF01979 Amidohydrolase family ABH09_04425 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ABH09_04430 PF01594 AI-2E family transporter ABH09_04435 PF00793 DAHP synthetase I family ABH09_04440 PF00075 RNase H ABH09_04445 PF02146 Sir2 family ABH09_04455 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_04460 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_04465 PF07364 Metallopeptidase family M81 ABH09_04465 PF07171 MlrC C-terminus ABH09_04510 PF01131 DNA topoisomerase ABH09_04510 PF01751 Toprim domain ABH09_04520 PF02534 Type IV secretory system Conjugative DNA transfer ABH09_04530 PF00437 Type II/IV secretion system protein ABH09_04555 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ABH09_04580 PF03743 Bacterial conjugation TrbI-like protein ABH09_04650 PF04002 RadC-like JAB domain ABH09_04720 PF00145 C-5 cytosine-specific DNA methylase ABH09_04750 PF01695 IstB-like ATP binding protein ABH09_04810 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABH09_04810 PF00753 Metallo-beta-lactamase superfamily ABH09_04830 PF05681 Fumarate hydratase (Fumerase) ABH09_04830 PF05683 Fumarase C-terminus ABH09_04835 PF12729 Four helix bundle sensory module for signal transduction ABH09_04835 PF00672 HAMP domain ABH09_04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_04855 PF03144 Elongation factor Tu domain 2 ABH09_04855 PF09105 Elongation factor SelB, winged helix ABH09_04855 PF09106 Elongation factor SelB, winged helix ABH09_04855 PF09107 Elongation factor SelB, winged helix ABH09_04855 PF00009 Elongation factor Tu GTP binding domain ABH09_04860 PF12390 Selenocysteine synthase N terminal ABH09_04860 PF03841 L-seryl-tRNA selenium transferase ABH09_04890 PF01168 Alanine racemase, N-terminal domain ABH09_04895 PF01783 Ribosomal L32p protein family ABH09_04900 PF00550 Phosphopantetheine attachment site ABH09_04905 PF14622 Ribonuclease-III-like ABH09_04905 PF00035 Double-stranded RNA binding motif ABH09_04910 PF02743 Cache domain ABH09_04910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_04910 PF00672 HAMP domain ABH09_04915 PF01430 Hsp33 protein ABH09_04920 PF01869 BadF/BadG/BcrA/BcrD ATPase family ABH09_04935 PF00301 Rubredoxin ABH09_04935 PF00753 Metallo-beta-lactamase superfamily ABH09_04935 PF00258 Flavodoxin ABH09_04940 PF00766 Electron transfer flavoprotein FAD-binding domain ABH09_04940 PF01012 Electron transfer flavoprotein domain ABH09_04945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABH09_04945 PF02770 Acyl-CoA dehydrogenase, middle domain ABH09_04945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABH09_04950 PF00989 PAS fold ABH09_04950 PF00158 Sigma-54 interaction domain ABH09_04950 PF02954 Bacterial regulatory protein, Fis family ABH09_04955 PF00378 Enoyl-CoA hydratase/isomerase ABH09_04965 PF02515 CoA-transferase family III ABH09_04970 PF02770 Acyl-CoA dehydrogenase, middle domain ABH09_04970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABH09_04970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABH09_04975 PF01012 Electron transfer flavoprotein domain ABH09_04975 PF00766 Electron transfer flavoprotein FAD-binding domain ABH09_04975 PF13237 4Fe-4S dicluster domain ABH09_04985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABH09_04985 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABH09_04985 PF18269 T3SS EscN ATPase C-terminal domain ABH09_04990 PF02108 Flagellar assembly protein FliH ABH09_04995 PF14842 FliG N-terminal domain ABH09_04995 PF14841 FliG middle domain ABH09_04995 PF01706 FliG C-terminal domain ABH09_05000 PF01514 Secretory protein of YscJ/FliF family ABH09_05000 PF08345 Flagellar M-ring protein C-terminal ABH09_05005 PF02049 Flagellar hook-basal body complex protein FliE ABH09_05010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABH09_05010 PF00460 Flagella basal body rod protein ABH09_05015 PF00460 Flagella basal body rod protein ABH09_05020 PF00004 ATPase family associated with various cellular activities (AAA) ABH09_05020 PF07724 AAA domain (Cdc48 subfamily) ABH09_05025 PF00227 Proteasome subunit ABH09_05030 PF03051 Peptidase C1-like family ABH09_05040 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ABH09_05045 PF01926 50S ribosome-binding GTPase ABH09_05050 PF00342 Phosphoglucose isomerase ABH09_05055 PF00953 Glycosyl transferase family 4 ABH09_05060 PF00291 Pyridoxal-phosphate dependent enzyme ABH09_05075 PF10996 Beta-Casp domain ABH09_05075 PF00753 Metallo-beta-lactamase superfamily ABH09_05075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABH09_05080 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABH09_05080 PF00588 SpoU rRNA Methylase family ABH09_05085 PF00588 SpoU rRNA Methylase family ABH09_05085 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABH09_05090 PF00391 PEP-utilising enzyme, mobile domain ABH09_05090 PF02896 PEP-utilising enzyme, TIM barrel domain ABH09_05105 PF13519 von Willebrand factor type A domain ABH09_05110 PF18663 Pallilysin beta barrel domain ABH09_05115 PF02803 Thiolase, C-terminal domain ABH09_05115 PF00108 Thiolase, N-terminal domain ABH09_05125 PF01588 Putative tRNA binding domain ABH09_05125 PF09334 tRNA synthetases class I (M) ABH09_05130 PF00005 ABC transporter ABH09_05130 PF17912 MalK OB fold domain ABH09_05130 PF03459 TOBE domain ABH09_05140 PF01702 Queuine tRNA-ribosyltransferase ABH09_05145 PF01967 MoaC family ABH09_05155 PF02743 Cache domain ABH09_05155 PF00672 HAMP domain ABH09_05155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_05160 PF16868 NMT1-like family ABH09_05170 PF03372 Endonuclease/Exonuclease/phosphatase family ABH09_05180 PF04304 Protein of unknown function (DUF454) ABH09_05185 PF00005 ABC transporter ABH09_05195 PF00403 Heavy-metal-associated domain ABH09_05200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABH09_05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABH09_05205 PF01979 Amidohydrolase family ABH09_05220 PF00005 ABC transporter ABH09_05225 PF01032 FecCD transport family ABH09_05250 PF01835 MG2 domain ABH09_05250 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ABH09_05250 PF07703 Alpha-2-macroglobulin bait region domain ABH09_05250 PF00207 Alpha-2-macroglobulin family ABH09_05250 PF17962 Bacterial macroglobulin domain 6 ABH09_05250 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ABH09_05250 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ABH09_05260 PF01381 Helix-turn-helix ABH09_05270 PF04851 Type III restriction enzyme, res subunit ABH09_05280 PF07687 Peptidase dimerisation domain ABH09_05280 PF01546 Peptidase family M20/M25/M40 ABH09_05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABH09_05285 PF01751 Toprim domain ABH09_05285 PF00204 DNA gyrase B ABH09_05285 PF00986 DNA gyrase B subunit, carboxyl terminus ABH09_05290 PF08367 Peptidase M16C associated ABH09_05290 PF00675 Insulinase (Peptidase family M16) ABH09_05290 PF05193 Peptidase M16 inactive domain ABH09_05295 PF14841 FliG middle domain ABH09_05295 PF14842 FliG N-terminal domain ABH09_05295 PF01706 FliG C-terminal domain ABH09_05300 PF02743 Cache domain ABH09_05300 PF00672 HAMP domain ABH09_05300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_05320 PF16811 TRAP transporter T-component ABH09_05330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABH09_05335 PF12627 Probable RNA and SrmB- binding site of polymerase A ABH09_05335 PF01743 Poly A polymerase head domain ABH09_05335 PF12626 Polymerase A arginine-rich C-terminus ABH09_05340 PF01814 Hemerythrin HHE cation binding domain ABH09_05345 PF00128 Alpha amylase, catalytic domain ABH09_05345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABH09_05345 PF03714 Bacterial pullanase-associated domain ABH09_05350 PF13416 Bacterial extracellular solute-binding protein ABH09_05355 PF00128 Alpha amylase, catalytic domain ABH09_05355 PF02903 Alpha amylase, N-terminal ig-like domain ABH09_05355 PF16657 Maltogenic Amylase, C-terminal domain ABH09_05365 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_05370 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABH09_05395 PF00085 Thioredoxin ABH09_05405 PF02895 Signal transducing histidine kinase, homodimeric domain ABH09_05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABH09_05405 PF01627 Hpt domain ABH09_05405 PF07194 P2 response regulator binding domain ABH09_05405 PF01584 CheW-like domain ABH09_05410 PF01584 CheW-like domain ABH09_05435 PF13186 Iron-sulfur cluster-binding domain ABH09_05445 PF02348 Cytidylyltransferase ABH09_05450 PF00206 Lyase ABH09_05450 PF02655 ATP-grasp domain ABH09_05455 PF01520 N-acetylmuramoyl-L-alanine amidase ABH09_05465 PF04620 Flagellar filament outer layer protein Flaa ABH09_05475 PF01649 Ribosomal protein S20 ABH09_05480 PF00216 Bacterial DNA-binding protein ABH09_05485 PF00795 Carbon-nitrogen hydrolase ABH09_05495 PF18146 Damage-inducible protein CinA KH domain ABH09_05495 PF02464 Competence-damaged protein ABH09_05495 PF00994 Probable molybdopterin binding domain ABH09_05500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABH09_05500 PF07498 Rho termination factor, N-terminal domain ABH09_05500 PF07497 Rho termination factor, RNA-binding domain ABH09_05505 PF01197 Ribosomal protein L31 ABH09_05510 PF03006 Haemolysin-III related ABH09_05525 PF00005 ABC transporter ABH09_05530 PF00196 Bacterial regulatory proteins, luxR family ABH09_05530 PF00072 Response regulator receiver domain ABH09_05535 PF07730 Histidine kinase ABH09_05550 PF00005 ABC transporter ABH09_05600 PF00005 ABC transporter ABH09_05605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABH09_05610 PF00892 EamA-like transporter family ABH09_05615 PF01161 Phosphatidylethanolamine-binding protein ABH09_05620 PF03575 Peptidase family S51 ABH09_05640 PF03466 LysR substrate binding domain ABH09_05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABH09_05695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABH09_05695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABH09_05700 PF00881 Nitroreductase family ABH09_05725 PF01351 Ribonuclease HII ABH09_05735 PF01725 Ham1 family ABH09_05740 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABH09_05745 PF00005 ABC transporter ABH09_05745 PF02687 FtsX-like permease family ABH09_05745 PF12704 MacB-like periplasmic core domain ABH09_05750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_05750 PF00672 HAMP domain ABH09_05750 PF02743 Cache domain ABH09_05755 PF00933 Glycosyl hydrolase family 3 N terminal domain ABH09_05755 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABH09_05760 PF07075 Protein of unknown function (DUF1343) ABH09_05770 PF00691 OmpA family ABH09_05770 PF13488 Glycine zipper ABH09_05775 PF01476 LysM domain ABH09_05775 PF01464 Transglycosylase SLT domain ABH09_05800 PF03932 CutC family ABH09_05815 PF00672 HAMP domain ABH09_05815 PF12729 Four helix bundle sensory module for signal transduction ABH09_05815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_05820 PF02779 Transketolase, pyrimidine binding domain ABH09_05820 PF00456 Transketolase, thiamine diphosphate binding domain ABH09_05825 PF07726 ATPase family associated with various cellular activities (AAA) ABH09_05825 PF17863 AAA lid domain ABH09_05840 PF13291 ACT domain ABH09_05840 PF04607 Region found in RelA / SpoT proteins ABH09_05840 PF02824 TGS domain ABH09_05850 PF05175 Methyltransferase small domain ABH09_05850 PF17827 PrmC N-terminal domain ABH09_05855 PF03462 PCRF domain ABH09_05855 PF00472 RF-1 domain ABH09_05860 PF12796 Ankyrin repeats (3 copies) ABH09_05865 PF00999 Sodium/hydrogen exchanger family ABH09_05870 PF13407 Periplasmic binding protein domain ABH09_05875 PF00005 ABC transporter ABH09_05880 PF02653 Branched-chain amino acid transport system / permease component ABH09_05885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABH09_05885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABH09_05890 PF01261 Xylose isomerase-like TIM barrel ABH09_05900 PF16258 Domain of unknown function (DUF4912) ABH09_05910 PF00300 Histidine phosphatase superfamily (branch 1) ABH09_05915 PF00005 ABC transporter ABH09_05915 PF17755 UvrA DNA-binding domain ABH09_05915 PF17760 UvrA interaction domain ABH09_05940 PF03577 Peptidase family C69 ABH09_05945 PF02719 Polysaccharide biosynthesis protein ABH09_05955 PF00809 Pterin binding enzyme ABH09_05960 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABH09_05970 PF01648 4'-phosphopantetheinyl transferase superfamily ABH09_05975 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) ABH09_05980 PF01416 tRNA pseudouridine synthase ABH09_05985 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABH09_05985 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABH09_05990 PF01554 MatE ABH09_05995 PF01037 Lrp/AsnC ligand binding domain ABH09_06000 PF00155 Aminotransferase class I and II ABH09_06010 PF00005 ABC transporter ABH09_06010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_06015 PF00005 ABC transporter ABH09_06015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_06020 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_06025 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABH09_06065 PF02632 BioY family ABH09_06070 PF00005 ABC transporter ABH09_06085 PF03462 PCRF domain ABH09_06085 PF00472 RF-1 domain ABH09_06095 PF00448 SRP54-type protein, GTPase domain ABH09_06095 PF02881 SRP54-type protein, helical bundle domain ABH09_06105 PF02687 FtsX-like permease family ABH09_06105 PF12704 MacB-like periplasmic core domain ABH09_06110 PF00005 ABC transporter ABH09_06120 PF00348 Polyprenyl synthetase ABH09_06125 PF01728 FtsJ-like methyltransferase ABH09_06130 PF03144 Elongation factor Tu domain 2 ABH09_06130 PF00009 Elongation factor Tu GTP binding domain ABH09_06130 PF03764 Elongation factor G, domain IV ABH09_06130 PF00679 Elongation factor G C-terminus ABH09_06130 PF14492 Elongation Factor G, domain II ABH09_06135 PF02743 Cache domain ABH09_06135 PF00672 HAMP domain ABH09_06135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_06230 PF03781 Sulfatase-modifying factor enzyme 1 ABH09_06235 PF08361 MAATS-type transcriptional repressor, C-terminal region ABH09_06235 PF00440 Bacterial regulatory proteins, tetR family ABH09_06240 PF00005 ABC transporter ABH09_06405 PF17932 Tetracyclin repressor-like, C-terminal domain ABH09_06405 PF00440 Bacterial regulatory proteins, tetR family ABH09_06410 PF00005 ABC transporter ABH09_06410 PF00664 ABC transporter transmembrane region ABH09_06415 PF00005 ABC transporter ABH09_06415 PF00664 ABC transporter transmembrane region ABH09_06420 PF00664 ABC transporter transmembrane region ABH09_06420 PF00005 ABC transporter ABH09_06425 PF00664 ABC transporter transmembrane region ABH09_06425 PF00005 ABC transporter ABH09_06440 PF06832 Penicillin-Binding Protein C-terminus Family ABH09_06440 PF00912 Transglycosylase ABH09_06440 PF00905 Penicillin binding protein transpeptidase domain ABH09_06445 PF01078 Magnesium chelatase, subunit ChlI ABH09_06445 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABH09_06455 PF03880 DbpA RNA binding domain ABH09_06465 PF13525 Outer membrane lipoprotein ABH09_06475 PF06470 SMC proteins Flexible Hinge Domain ABH09_06475 PF02463 RecF/RecN/SMC N terminal domain ABH09_06485 PF00209 Sodium:neurotransmitter symporter family ABH09_06490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABH09_06500 PF04011 LemA family ABH09_06505 PF00440 Bacterial regulatory proteins, tetR family ABH09_06505 PF08361 MAATS-type transcriptional repressor, C-terminal region ABH09_06510 PF00664 ABC transporter transmembrane region ABH09_06510 PF00005 ABC transporter ABH09_06515 PF00664 ABC transporter transmembrane region ABH09_06515 PF00005 ABC transporter ABH09_06530 PF07729 FCD domain ABH09_06530 PF00392 Bacterial regulatory proteins, gntR family ABH09_06535 PF01330 RuvA N terminal domain ABH09_06540 PF09186 Domain of unknown function (DUF1949) ABH09_06540 PF01205 Uncharacterized protein family UPF0029 ABH09_06545 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABH09_06545 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABH09_06550 PF04101 Glycosyltransferase family 28 C-terminal domain ABH09_06550 PF03033 Glycosyltransferase family 28 N-terminal domain ABH09_06560 PF09115 DNA polymerase III, delta subunit, C terminal ABH09_06575 PF00772 DnaB-like helicase N terminal domain ABH09_06575 PF03796 DnaB-like helicase C terminal domain ABH09_06580 PF03948 Ribosomal protein L9, C-terminal domain ABH09_06580 PF01281 Ribosomal protein L9, N-terminal domain ABH09_06585 PF01084 Ribosomal protein S18 ABH09_06590 PF00436 Single-strand binding protein family ABH09_06595 PF01250 Ribosomal protein S6 ABH09_06615 PF02401 LytB protein ABH09_06620 PF00266 Aminotransferase class-V ABH09_06625 PF01761 3-dehydroquinate synthase ABH09_06640 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain ABH09_06640 PF07228 Stage II sporulation protein E (SpoIIE) ABH09_06645 PF01740 STAS domain ABH09_06680 PF01545 Cation efflux family ABH09_06685 PF01212 Beta-eliminating lyase ABH09_06690 PF01325 Iron dependent repressor, N-terminal DNA binding domain ABH09_06690 PF02742 Iron dependent repressor, metal binding and dimerisation domain ABH09_06695 PF01297 Zinc-uptake complex component A periplasmic ABH09_06700 PF00005 ABC transporter ABH09_06705 PF00950 ABC 3 transport family ABH09_06710 PF00950 ABC 3 transport family ABH09_06715 PF04463 Protein of unknown function (DUF523) ABH09_06720 PF10431 C-terminal, D2-small domain, of ClpB protein ABH09_06720 PF02861 Clp amino terminal domain, pathogenicity island component ABH09_06720 PF17871 AAA lid domain ABH09_06720 PF00004 ATPase family associated with various cellular activities (AAA) ABH09_06720 PF07724 AAA domain (Cdc48 subfamily) ABH09_06725 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain ABH09_06735 PF00158 Sigma-54 interaction domain ABH09_06735 PF00989 PAS fold ABH09_06735 PF02954 Bacterial regulatory protein, Fis family ABH09_06750 PF07664 Ferrous iron transport protein B C terminus ABH09_06750 PF17910 FeoB cytosolic helical domain ABH09_06750 PF02421 Ferrous iron transport protein B ABH09_06750 PF07670 Nucleoside recognition ABH09_06760 PF00989 PAS fold ABH09_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABH09_06760 PF00512 His Kinase A (phospho-acceptor) domain ABH09_06765 PF02954 Bacterial regulatory protein, Fis family ABH09_06765 PF00072 Response regulator receiver domain ABH09_06765 PF00158 Sigma-54 interaction domain ABH09_06790 PF16314 Domain of unknown function (DUF4954) ABH09_06820 PF00121 Triosephosphate isomerase ABH09_06825 PF01842 ACT domain ABH09_06825 PF03315 Serine dehydratase beta chain ABH09_06830 PF03313 Serine dehydratase alpha chain ABH09_06840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_06840 PF02743 Cache domain ABH09_06840 PF00672 HAMP domain ABH09_06850 PF03819 MazG nucleotide pyrophosphohydrolase domain ABH09_06850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABH09_06865 PF01973 Protein of unknown function DUF115 ABH09_06890 PF00392 Bacterial regulatory proteins, gntR family ABH09_06890 PF07729 FCD domain ABH09_06895 PF04324 BFD-like [2Fe-2S] binding domain ABH09_06895 PF01266 FAD dependent oxidoreductase ABH09_06900 PF04324 BFD-like [2Fe-2S] binding domain ABH09_06900 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABH09_06910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABH09_06910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABH09_06930 PF14542 GCN5-related N-acetyl-transferase ABH09_06970 PF01145 SPFH domain / Band 7 family ABH09_06980 PF00117 Glutamine amidotransferase class-I ABH09_06980 PF06418 CTP synthase N-terminus ABH09_06985 PF01367 5'-3' exonuclease, C-terminal SAM fold ABH09_06985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABH09_06985 PF00476 DNA polymerase family A ABH09_06985 PF01612 3'-5' exonuclease ABH09_06995 PF03781 Sulfatase-modifying factor enzyme 1 ABH09_07005 PF05670 NFACT protein RNA binding domain ABH09_07010 PF00005 ABC transporter ABH09_07010 PF08402 TOBE domain ABH09_07015 PF01850 PIN domain ABH09_07025 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_07030 PF01547 Bacterial extracellular solute-binding protein ABH09_07040 PF03702 Anhydro-N-acetylmuramic acid kinase ABH09_07050 PF02254 TrkA-N domain ABH09_07050 PF02080 TrkA-C domain ABH09_07055 PF13091 PLD-like domain ABH09_07065 PF00005 ABC transporter ABH09_07065 PF08402 TOBE domain ABH09_07070 PF02386 Cation transport protein ABH09_07075 PF05362 Lon protease (S16) C-terminal proteolytic domain ABH09_07075 PF13654 AAA domain ABH09_07085 PF13508 Acetyltransferase (GNAT) domain ABH09_07085 PF00583 Acetyltransferase (GNAT) family ABH09_07095 PF17131 Outer membrane lipoprotein-sorting protein ABH09_07110 PF00005 ABC transporter ABH09_07110 PF00664 ABC transporter transmembrane region ABH09_07115 PF02661 Fic/DOC family ABH09_07115 PF13784 Fic/DOC family N-terminal ABH09_07120 PF00005 ABC transporter ABH09_07130 PF00440 Bacterial regulatory proteins, tetR family ABH09_07165 PF00440 Bacterial regulatory proteins, tetR family ABH09_07175 PF14353 CpXC protein ABH09_07180 PF17820 PDZ domain ABH09_07180 PF02163 Peptidase family M50 ABH09_07185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABH09_07185 PF13288 DXP reductoisomerase C-terminal domain ABH09_07185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABH09_07195 PF01255 Putative undecaprenyl diphosphate synthase ABH09_07200 PF01765 Ribosome recycling factor ABH09_07205 PF00889 Elongation factor TS ABH09_07210 PF00318 Ribosomal protein S2 ABH09_07215 PF02545 Maf-like protein ABH09_07225 PF03129 Anticodon binding domain ABH09_07225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABH09_07225 PF04073 Aminoacyl-tRNA editing domain ABH09_07230 PF03781 Sulfatase-modifying factor enzyme 1 ABH09_07240 PF07009 NusG domain II ABH09_07245 PF01734 Patatin-like phospholipase ABH09_07250 PF01584 CheW-like domain ABH09_07255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABH09_07260 PF01513 ATP-NAD kinase ABH09_07265 PF02463 RecF/RecN/SMC N terminal domain ABH09_07295 PF09820 Predicted AAA-ATPase ABH09_07295 PF08011 PD-(D/E)XK nuclease superfamily ABH09_07315 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABH09_07315 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABH09_07320 PF07977 FabA-like domain ABH09_07325 PF01106 NifU-like domain ABH09_07335 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ABH09_07335 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ABH09_07350 PF00465 Iron-containing alcohol dehydrogenase ABH09_07365 PF00753 Metallo-beta-lactamase superfamily ABH09_07365 PF12706 Beta-lactamase superfamily domain ABH09_07375 PF04773 FecR protein ABH09_07380 PF00211 Adenylate and Guanylate cyclase catalytic domain ABH09_07380 PF00072 Response regulator receiver domain ABH09_07385 PF02934 GatB/GatE catalytic domain ABH09_07385 PF02637 GatB domain ABH09_07390 PF01425 Amidase ABH09_07400 PF00672 HAMP domain ABH09_07400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_07400 PF02743 Cache domain ABH09_07435 PF01979 Amidohydrolase family ABH09_07440 PF03313 Serine dehydratase alpha chain ABH09_07445 PF00375 Sodium:dicarboxylate symporter family ABH09_07455 PF00814 Glycoprotease family ABH09_07475 PF00005 ABC transporter ABH09_07485 PF00154 recA bacterial DNA recombination protein ABH09_07490 PF01195 Peptidyl-tRNA hydrolase ABH09_07495 PF02580 D-Tyr-tRNA(Tyr) deacylase ABH09_07500 PF02527 rRNA small subunit methyltransferase G ABH09_07505 PF02237 Biotin protein ligase C terminal domain ABH09_07505 PF03099 Biotin/lipoate A/B protein ligase family ABH09_07510 PF00929 Exonuclease ABH09_07515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABH09_07515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABH09_07515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABH09_07515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABH09_07525 PF17092 Penicillin-binding protein OB-like domain ABH09_07525 PF00905 Penicillin binding protein transpeptidase domain ABH09_07525 PF00912 Transglycosylase ABH09_07545 PF13847 Methyltransferase domain ABH09_07550 PF12419 SNF2 Helicase protein ABH09_07550 PF00271 Helicase conserved C-terminal domain ABH09_07550 PF00176 SNF2 family N-terminal domain ABH09_07565 PF10509 Galactokinase galactose-binding signature ABH09_07565 PF08544 GHMP kinases C terminal ABH09_07570 PF00795 Carbon-nitrogen hydrolase ABH09_07575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABH09_07590 PF00941 FAD binding domain in molybdopterin dehydrogenase ABH09_07605 PF02132 RecR protein ABH09_07605 PF13662 Toprim domain ABH09_07610 PF02575 YbaB/EbfC DNA-binding family ABH09_07620 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABH09_07620 PF12170 DNA polymerase III tau subunit V interacting with alpha ABH09_07620 PF12169 DNA polymerase III subunits gamma and tau domain III ABH09_07625 PF00117 Glutamine amidotransferase class-I ABH09_07625 PF00958 GMP synthase C terminal domain ABH09_07630 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABH09_07640 PF02075 Crossover junction endodeoxyribonuclease RuvC ABH09_07645 PF00953 Glycosyl transferase family 4 ABH09_07650 PF00899 ThiF family ABH09_07655 PF00691 OmpA family ABH09_07660 PF00578 AhpC/TSA family ABH09_07660 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABH09_07675 PF00207 Alpha-2-macroglobulin family ABH09_07675 PF07703 Alpha-2-macroglobulin bait region domain ABH09_07675 PF01835 MG2 domain ABH09_07685 PF00578 AhpC/TSA family ABH09_07690 PF02683 Cytochrome C biogenesis protein transmembrane region ABH09_07700 PF01476 LysM domain ABH09_07700 PF00877 NlpC/P60 family ABH09_07700 PF08239 Bacterial SH3 domain ABH09_07705 PF00317 Ribonucleotide reductase, all-alpha domain ABH09_07705 PF02867 Ribonucleotide reductase, barrel domain ABH09_07705 PF03477 ATP cone domain ABH09_07710 PF01192 RNA polymerase Rpb6 ABH09_07735 PF00155 Aminotransferase class I and II ABH09_07755 PF04073 Aminoacyl-tRNA editing domain ABH09_07760 PF08323 Starch synthase catalytic domain ABH09_07760 PF00534 Glycosyl transferases group 1 ABH09_07770 PF00877 NlpC/P60 family ABH09_07775 PF00501 AMP-binding enzyme ABH09_07775 PF13193 AMP-binding enzyme C-terminal domain ABH09_07780 PF00912 Transglycosylase ABH09_07780 PF00905 Penicillin binding protein transpeptidase domain ABH09_07790 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ABH09_07790 PF00703 Glycosyl hydrolases family 2 ABH09_07790 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ABH09_07790 PF02837 Glycosyl hydrolases family 2, sugar binding domain ABH09_07805 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_07810 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_07840 PF00886 Ribosomal protein S16 ABH09_07850 PF01782 RimM N-terminal domain ABH09_07855 PF01746 tRNA (Guanine-1)-methyltransferase ABH09_07860 PF01245 Ribosomal protein L19 ABH09_07875 PF00072 Response regulator receiver domain ABH09_07880 PF02021 Uncharacterised protein family UPF0102 ABH09_07895 PF09334 tRNA synthetases class I (M) ABH09_07895 PF13603 Leucyl-tRNA synthetase, Domain 2 ABH09_07895 PF00133 tRNA synthetases class I (I, L, M and V) ABH09_07895 PF08264 Anticodon-binding domain of tRNA ABH09_07905 PF00301 Rubredoxin ABH09_07925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABH09_07945 PF03548 Outer membrane lipoprotein carrier protein LolA ABH09_07955 PF00919 Uncharacterized protein family UPF0004 ABH09_07955 PF18693 TRAM domain ABH09_07955 PF04055 Radical SAM superfamily ABH09_07975 PF02824 TGS domain ABH09_07975 PF03129 Anticodon binding domain ABH09_07975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABH09_07975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABH09_07995 PF00664 ABC transporter transmembrane region ABH09_07995 PF00005 ABC transporter ABH09_07995 PF08021 Siderophore-interacting FAD-binding domain ABH09_07995 PF04954 Siderophore-interacting protein ABH09_08015 PF00664 ABC transporter transmembrane region ABH09_08015 PF00005 ABC transporter ABH09_08020 PF13276 HTH-like domain ABH09_08020 PF00665 Integrase core domain ABH09_08020 PF13333 Integrase core domain ABH09_08105 PF00664 ABC transporter transmembrane region ABH09_08105 PF00005 ABC transporter ABH09_08110 PF00664 ABC transporter transmembrane region ABH09_08110 PF00005 ABC transporter ABH09_08115 PF00672 HAMP domain ABH09_08115 PF00211 Adenylate and Guanylate cyclase catalytic domain ABH09_08115 PF02743 Cache domain ABH09_08135 PF01661 Macro domain ABH09_08145 PF12849 PBP superfamily domain ABH09_08150 PF02875 Mur ligase family, glutamate ligase domain ABH09_08150 PF08245 Mur ligase middle domain ABH09_08155 PF01479 S4 domain ABH09_08155 PF00849 RNA pseudouridylate synthase ABH09_08160 PF00849 RNA pseudouridylate synthase ABH09_08170 PF00398 Ribosomal RNA adenine dimethylase ABH09_08185 PF03062 MBOAT, membrane-bound O-acyltransferase family ABH09_08195 PF01145 SPFH domain / Band 7 family ABH09_08200 PF01145 SPFH domain / Band 7 family ABH09_08215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABH09_08215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABH09_08245 PF10609 NUBPL iron-transfer P-loop NTPase ABH09_08255 PF01790 Prolipoprotein diacylglyceryl transferase ABH09_08265 PF03477 ATP cone domain ABH09_08275 PF00465 Iron-containing alcohol dehydrogenase ABH09_08295 PF01227 GTP cyclohydrolase I ABH09_08295 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABH09_08300 PF02616 Segregation and condensation protein ScpA ABH09_08305 PF04079 Segregation and condensation complex subunit ScpB ABH09_08310 PF00849 RNA pseudouridylate synthase ABH09_08310 PF01479 S4 domain ABH09_08320 PF00849 RNA pseudouridylate synthase ABH09_08330 PF01963 TraB family ABH09_08335 PF02381 MraZ protein, putative antitoxin-like ABH09_08340 PF01795 MraW methylase family ABH09_08350 PF01225 Mur ligase family, catalytic domain ABH09_08350 PF02875 Mur ligase family, glutamate ligase domain ABH09_08350 PF08245 Mur ligase middle domain ABH09_08355 PF01098 Cell cycle protein ABH09_08360 PF03799 Cell division protein FtsQ ABH09_08360 PF08478 POTRA domain, FtsQ-type ABH09_08365 PF02491 SHS2 domain inserted in FTSA ABH09_08370 PF12327 FtsZ family, C-terminal domain ABH09_08370 PF00091 Tubulin/FtsZ family, GTPase domain ABH09_08380 PF00375 Sodium:dicarboxylate symporter family ABH09_08390 PF00005 ABC transporter ABH09_08415 PF12704 MacB-like periplasmic core domain ABH09_08415 PF02687 FtsX-like permease family ABH09_08415 PF00005 ABC transporter ABH09_08430 PF01554 MatE ABH09_08435 PF03806 AbgT putative transporter family ABH09_08445 PF00440 Bacterial regulatory proteins, tetR family ABH09_08450 PF02652 L-lactate permease ABH09_08455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABH09_08465 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_08470 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_08475 PF01547 Bacterial extracellular solute-binding protein ABH09_08485 PF13580 SIS domain ABH09_08490 PF01869 BadF/BadG/BcrA/BcrD ATPase family ABH09_08495 PF12799 Leucine Rich repeats (2 copies) ABH09_08495 PF12354 Bacterial adhesion/invasion protein N terminal ABH09_08495 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) ABH09_08495 PF08191 LRR adjacent ABH09_08500 PF00589 Phage integrase family ABH09_08500 PF02899 Phage integrase, N-terminal SAM-like domain ABH09_08505 PF00860 Permease family ABH09_08525 PF00163 Ribosomal protein S4/S9 N-terminal domain ABH09_08525 PF01479 S4 domain ABH09_08545 PF00580 UvrD/REP helicase N-terminal domain ABH09_08545 PF13361 UvrD-like helicase C-terminal domain ABH09_08550 PF01370 NAD dependent epimerase/dehydratase family ABH09_08570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABH09_08570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABH09_08570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABH09_08585 PF01547 Bacterial extracellular solute-binding protein ABH09_08615 PF01170 Putative RNA methylase family UPF0020 ABH09_08615 PF02926 THUMP domain ABH09_08615 PF10672 S-adenosylmethionine-dependent methyltransferase ABH09_08620 PF02629 CoA binding domain ABH09_08620 PF06971 Putative DNA-binding protein N-terminus ABH09_08630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABH09_08640 PF01238 Phosphomannose isomerase type I ABH09_08645 PF17764 3′ DNA-binding domain (3′BD) ABH09_08645 PF18074 Primosomal protein N C-terminal domain ABH09_08645 PF00271 Helicase conserved C-terminal domain ABH09_08645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABH09_08645 PF00270 DEAD/DEAH box helicase ABH09_08650 PF03167 Uracil DNA glycosylase superfamily ABH09_08670 PF00005 ABC transporter ABH09_08675 PF10396 GTP-binding protein TrmE N-terminus ABH09_08675 PF01926 50S ribosome-binding GTPase ABH09_08675 PF12631 MnmE helical domain ABH09_08680 PF05191 Adenylate kinase, active site lid ABH09_08690 PF01098 Cell cycle protein ABH09_08695 PF03717 Penicillin-binding Protein dimerisation domain ABH09_08695 PF00905 Penicillin binding protein transpeptidase domain ABH09_08730 PF04545 Sigma-70, region 4 ABH09_08730 PF04539 Sigma-70 region 3 ABH09_08730 PF04542 Sigma-70 region 2 ABH09_08730 PF00140 Sigma-70 factor, region 1.2 ABH09_08730 PF03979 Sigma-70 factor, region 1.1 ABH09_08735 PF08275 DNA primase catalytic core, N-terminal domain ABH09_08735 PF01807 CHC2 zinc finger ABH09_08740 PF02618 YceG-like family ABH09_08760 PF04343 Protein of unknown function, DUF488 ABH09_08800 PF02540 NAD synthase ABH09_08810 PF04551 GcpE protein ABH09_08830 PF00834 Ribulose-phosphate 3 epimerase family ABH09_08850 PF01176 Translation initiation factor 1A / IF-1 ABH09_08855 PF00684 DnaJ central domain ABH09_08855 PF01556 DnaJ C terminal domain ABH09_08855 PF00226 DnaJ domain ABH09_08860 PF00696 Amino acid kinase family ABH09_08865 PF01841 Transglutaminase-like superfamily ABH09_08875 PF04539 Sigma-70 region 3 ABH09_08875 PF04545 Sigma-70, region 4 ABH09_08875 PF04542 Sigma-70 region 2 ABH09_08880 PF09190 DALR domain ABH09_08880 PF01406 tRNA synthetases class I (C) catalytic domain ABH09_08885 PF01565 FAD binding domain ABH09_08885 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABH09_08890 PF00027 Cyclic nucleotide-binding domain ABH09_08890 PF13545 Crp-like helix-turn-helix domain ABH09_08905 PF01339 CheB methylesterase ABH09_08905 PF00072 Response regulator receiver domain ABH09_08910 PF03705 CheR methyltransferase, all-alpha domain ABH09_08910 PF01739 CheR methyltransferase, SAM binding domain ABH09_08915 PF17239 Family of unknown function (DUF5312) ABH09_08945 PF00162 Phosphoglycerate kinase ABH09_08955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABH09_08955 PF03129 Anticodon binding domain ABH09_08955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABH09_08985 PF02016 LD-carboxypeptidase N-terminal domain ABH09_08985 PF17676 LD-carboxypeptidase C-terminal domain ABH09_09010 PF13333 Integrase core domain ABH09_09010 PF00665 Integrase core domain ABH09_09010 PF13276 HTH-like domain ABH09_09015 PF07728 AAA domain (dynein-related subfamily) ABH09_09015 PF12102 Domain of unknown function (DUF3578) ABH09_09045 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABH09_09045 PF00391 PEP-utilising enzyme, mobile domain ABH09_09045 PF02896 PEP-utilising enzyme, TIM barrel domain ABH09_09050 PF02690 Na+/Pi-cotransporter ABH09_09055 PF00501 AMP-binding enzyme ABH09_09055 PF13193 AMP-binding enzyme C-terminal domain ABH09_09065 PF01588 Putative tRNA binding domain ABH09_09070 PF01613 Flavin reductase like domain ABH09_09070 PF00753 Metallo-beta-lactamase superfamily ABH09_09080 PF12695 Alpha/beta hydrolase family ABH09_09085 PF04002 RadC-like JAB domain ABH09_09095 PF03471 Transporter associated domain ABH09_09095 PF00571 CBS domain ABH09_09100 PF02130 Uncharacterized protein family UPF0054 ABH09_09105 PF07698 7TM receptor with intracellular HD hydrolase ABH09_09105 PF01966 HD domain ABH09_09105 PF07697 7TM-HD extracellular ABH09_09110 PF02562 PhoH-like protein ABH09_09115 PF00210 Ferritin-like domain ABH09_09125 PF00293 NUDIX domain ABH09_09130 PF02743 Cache domain ABH09_09130 PF00672 HAMP domain ABH09_09130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_09145 PF01475 Ferric uptake regulator family ABH09_09160 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component ABH09_09165 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component ABH09_09170 PF01869 BadF/BadG/BcrA/BcrD ATPase family ABH09_09175 PF03616 Sodium/glutamate symporter ABH09_09180 PF01039 Carboxyl transferase domain ABH09_09185 PF01144 Coenzyme A transferase ABH09_09190 PF01144 Coenzyme A transferase ABH09_09195 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ABH09_09200 PF00289 Biotin carboxylase, N-terminal domain ABH09_09200 PF00364 Biotin-requiring enzyme ABH09_09200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABH09_09200 PF02785 Biotin carboxylase C-terminal domain ABH09_09210 PF03616 Sodium/glutamate symporter ABH09_09215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABH09_09215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABH09_09220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_09220 PF02743 Cache domain ABH09_09220 PF00672 HAMP domain ABH09_09230 PF01641 SelR domain ABH09_09230 PF01625 Peptide methionine sulfoxide reductase ABH09_09235 PF13180 PDZ domain ABH09_09245 PF01171 PP-loop family ABH09_09250 PF01386 Ribosomal L25p family ABH09_09250 PF14693 Ribosomal protein TL5, C-terminal domain ABH09_09260 PF04026 SpoVG ABH09_09265 PF00288 GHMP kinases N terminal domain ABH09_09270 PF01230 HIT domain ABH09_09275 PF00501 AMP-binding enzyme ABH09_09280 PF02872 5'-nucleotidase, C-terminal domain ABH09_09280 PF17936 Bacterial Ig domain ABH09_09280 PF00149 Calcineurin-like phosphoesterase ABH09_09300 PF00270 DEAD/DEAH box helicase ABH09_09300 PF00271 Helicase conserved C-terminal domain ABH09_09300 PF00570 HRDC domain ABH09_09300 PF09382 RQC domain ABH09_09300 PF16124 RecQ zinc-binding ABH09_09315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABH09_09315 PF02272 DHHA1 domain ABH09_09315 PF01411 tRNA synthetases class II (A) ABH09_09330 PF01554 MatE ABH09_09335 PF00440 Bacterial regulatory proteins, tetR family ABH09_09335 PF17922 Tetracyclin repressor-like, C-terminal domain ABH09_09350 PF00005 ABC transporter ABH09_09350 PF12848 ABC transporter ABH09_09365 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABH09_09370 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABH09_09385 PF00177 Ribosomal protein S7p/S5e ABH09_09390 PF00164 Ribosomal protein S12/S23 ABH09_09395 PF04998 RNA polymerase Rpb1, domain 5 ABH09_09395 PF04997 RNA polymerase Rpb1, domain 1 ABH09_09395 PF00623 RNA polymerase Rpb1, domain 2 ABH09_09395 PF04983 RNA polymerase Rpb1, domain 3 ABH09_09395 PF05000 RNA polymerase Rpb1, domain 4 ABH09_09400 PF10385 RNA polymerase beta subunit external 1 domain ABH09_09400 PF04565 RNA polymerase Rpb2, domain 3 ABH09_09400 PF04561 RNA polymerase Rpb2, domain 2 ABH09_09400 PF04563 RNA polymerase beta subunit ABH09_09400 PF04560 RNA polymerase Rpb2, domain 7 ABH09_09400 PF00562 RNA polymerase Rpb2, domain 6 ABH09_09405 PF00542 Ribosomal protein L7/L12 C-terminal domain ABH09_09405 PF16320 Ribosomal protein L7/L12 dimerisation domain ABH09_09410 PF00466 Ribosomal protein L10 ABH09_09415 PF00687 Ribosomal protein L1p/L10e family ABH09_09420 PF00298 Ribosomal protein L11, RNA binding domain ABH09_09420 PF03946 Ribosomal protein L11, N-terminal domain ABH09_09425 PF00467 KOW motif ABH09_09425 PF02357 Transcription termination factor nusG ABH09_09430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABH09_09440 PF00471 Ribosomal protein L33 ABH09_09455 PF01316 Arginine repressor, DNA binding domain ABH09_09455 PF02863 Arginine repressor, C-terminal domain ABH09_09460 PF02547 Queuosine biosynthesis protein ABH09_09470 PF01925 Sulfite exporter TauE/SafE ABH09_09485 PF02568 Thiamine biosynthesis protein (ThiI) ABH09_09485 PF02926 THUMP domain ABH09_09495 PF03590 Aspartate-ammonia ligase ABH09_09525 PF01551 Peptidase family M23 ABH09_09525 PF04225 Opacity-associated protein A LysM-like domain ABH09_09535 PF13187 4Fe-4S dicluster domain ABH09_09540 PF01624 MutS domain I ABH09_09540 PF05188 MutS domain II ABH09_09540 PF05192 MutS domain III ABH09_09540 PF05190 MutS family domain IV ABH09_09540 PF00488 MutS domain V ABH09_09550 PF01103 Surface antigen ABH09_09550 PF07244 Surface antigen variable number repeat ABH09_09560 PF02223 Thymidylate kinase ABH09_09570 PF01551 Peptidase family M23 ABH09_09570 PF04225 Opacity-associated protein A LysM-like domain ABH09_09585 PF04468 PSP1 C-terminal conserved region ABH09_09605 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABH09_09605 PF08501 Shikimate dehydrogenase substrate binding domain ABH09_09610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABH09_09615 PF01048 Phosphorylase superfamily ABH09_09625 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABH09_09625 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABH09_09630 PF00378 Enoyl-CoA hydratase/isomerase ABH09_09635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABH09_09635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABH09_09640 PF00440 Bacterial regulatory proteins, tetR family ABH09_09640 PF08359 YsiA-like protein, C-terminal region ABH09_09645 PF00391 PEP-utilising enzyme, mobile domain ABH09_09645 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABH09_09650 PF01554 MatE ABH09_09655 PF00924 Mechanosensitive ion channel ABH09_09665 PF00005 ABC transporter ABH09_09665 PF08402 TOBE domain ABH09_09670 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_09675 PF01418 Helix-turn-helix domain, rpiR family ABH09_09675 PF01380 SIS domain ABH09_09680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABH09_09680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABH09_09685 PF00156 Phosphoribosyl transferase domain ABH09_09690 PF01979 Amidohydrolase family ABH09_09695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABH09_09700 PF01180 Dihydroorotate dehydrogenase ABH09_09705 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ABH09_09710 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ABH09_09710 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ABH09_09715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABH09_09715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABH09_09725 PF11756 Nitrous oxide-stimulated promoter ABH09_09735 PF04954 Siderophore-interacting protein ABH09_09735 PF08021 Siderophore-interacting FAD-binding domain ABH09_09735 PF00005 ABC transporter ABH09_09735 PF00664 ABC transporter transmembrane region ABH09_09740 PF08003 Protein of unknown function (DUF1698) ABH09_09750 PF00005 ABC transporter ABH09_09750 PF00664 ABC transporter transmembrane region ABH09_09755 PF00152 tRNA synthetases class II (D, K and N) ABH09_09755 PF02938 GAD domain ABH09_09755 PF01336 OB-fold nucleic acid binding domain ABH09_09760 PF00152 tRNA synthetases class II (D, K and N) ABH09_09790 PF02653 Branched-chain amino acid transport system / permease component ABH09_09795 PF02653 Branched-chain amino acid transport system / permease component ABH09_09800 PF00005 ABC transporter ABH09_09805 PF02608 ABC transporter substrate-binding protein PnrA-like ABH09_09810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_09810 PF02203 Tar ligand binding domain homologue ABH09_09810 PF00672 HAMP domain ABH09_09815 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_09820 PF00266 Aminotransferase class-V ABH09_09840 PF00586 AIR synthase related protein, N-terminal domain ABH09_09840 PF02769 AIR synthase related protein, C-terminal domain ABH09_09845 PF17757 UvrB interaction domain ABH09_09845 PF00271 Helicase conserved C-terminal domain ABH09_09845 PF04851 Type III restriction enzyme, res subunit ABH09_09845 PF02151 UvrB/uvrC motif ABH09_09845 PF12344 Ultra-violet resistance protein B ABH09_09850 PF00574 Clp protease ABH09_09880 PF10502 Signal peptidase, peptidase S26 ABH09_09885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_09885 PF00672 HAMP domain ABH09_09890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABH09_09890 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABH09_09905 PF04055 Radical SAM superfamily ABH09_09920 PF00106 short chain dehydrogenase ABH09_09925 PF00258 Flavodoxin ABH09_09930 PF12705 PD-(D/E)XK nuclease superfamily ABH09_09955 PF00766 Electron transfer flavoprotein FAD-binding domain ABH09_09955 PF01012 Electron transfer flavoprotein domain ABH09_09960 PF01012 Electron transfer flavoprotein domain ABH09_09965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABH09_09965 PF02770 Acyl-CoA dehydrogenase, middle domain ABH09_09965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABH09_09970 PF00171 Aldehyde dehydrogenase family ABH09_09975 PF01699 Sodium/calcium exchanger protein ABH09_09980 PF04452 RNA methyltransferase ABH09_09995 PF01470 Pyroglutamyl peptidase ABH09_10015 PF00672 HAMP domain ABH09_10015 PF01966 HD domain ABH09_10020 PF00814 Glycoprotease family ABH09_10025 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABH09_10030 PF00849 RNA pseudouridylate synthase ABH09_10040 PF02390 Putative methyltransferase ABH09_10055 PF00534 Glycosyl transferases group 1 ABH09_10055 PF08323 Starch synthase catalytic domain ABH09_10075 PF02554 Carbon starvation protein CstA ABH09_10080 PF00294 pfkB family carbohydrate kinase ABH09_10085 PF00294 pfkB family carbohydrate kinase ABH09_10090 PF01156 Inosine-uridine preferring nucleoside hydrolase ABH09_10095 PF02653 Branched-chain amino acid transport system / permease component ABH09_10105 PF00005 ABC transporter ABH09_10110 PF02608 ABC transporter substrate-binding protein PnrA-like ABH09_10120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABH09_10120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABH09_10125 PF00149 Calcineurin-like phosphoesterase ABH09_10135 PF02601 Exonuclease VII, large subunit ABH09_10135 PF13742 OB-fold nucleic acid binding domain ABH09_10145 PF01264 Chorismate synthase ABH09_10155 PF00005 ABC transporter ABH09_10160 PF01458 Uncharacterized protein family (UPF0051) ABH09_10170 PF00266 Aminotransferase class-V ABH09_10175 PF13277 YmdB-like protein ABH09_10180 PF00085 Thioredoxin ABH09_10190 PF04072 Leucine carboxyl methyltransferase ABH09_10205 PF13416 Bacterial extracellular solute-binding protein ABH09_10210 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10215 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10220 PF00206 Lyase ABH09_10220 PF10415 Fumarase C C-terminus ABH09_10225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABH09_10240 PF01081 KDPG and KHG aldolase ABH09_10245 PF00654 Voltage gated chloride channel ABH09_10250 PF00860 Permease family ABH09_10260 PF00483 Nucleotidyl transferase ABH09_10275 PF07075 Protein of unknown function (DUF1343) ABH09_10280 PF03448 MgtE intracellular N domain ABH09_10280 PF01769 Divalent cation transporter ABH09_10280 PF00571 CBS domain ABH09_10295 PF00860 Permease family ABH09_10305 PF00664 ABC transporter transmembrane region ABH09_10305 PF00005 ABC transporter ABH09_10310 PF04954 Siderophore-interacting protein ABH09_10310 PF08021 Siderophore-interacting FAD-binding domain ABH09_10310 PF00005 ABC transporter ABH09_10310 PF00664 ABC transporter transmembrane region ABH09_10320 PF01850 PIN domain ABH09_10325 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABH09_10330 PF00440 Bacterial regulatory proteins, tetR family ABH09_10335 PF12627 Probable RNA and SrmB- binding site of polymerase A ABH09_10335 PF01743 Poly A polymerase head domain ABH09_10335 PF12627 Probable RNA and SrmB- binding site of polymerase A ABH09_10335 PF13735 tRNA nucleotidyltransferase domain 2 putative ABH09_10335 PF01743 Poly A polymerase head domain ABH09_10335 PF13735 tRNA nucleotidyltransferase domain 2 putative ABH09_10345 PF01613 Flavin reductase like domain ABH09_10350 PF13086 AAA domain ABH09_10350 PF13087 AAA domain ABH09_10350 PF13195 Protein of unknown function (DUF4011) ABH09_10350 PF13086 AAA domain ABH09_10350 PF13087 AAA domain ABH09_10350 PF13195 Protein of unknown function (DUF4011) ABH09_10355 PF00271 Helicase conserved C-terminal domain ABH09_10355 PF00270 DEAD/DEAH box helicase ABH09_10355 PF09369 Domain of unknown function (DUF1998) ABH09_10370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABH09_10370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABH09_10380 PF00226 DnaJ domain ABH09_10380 PF01556 DnaJ C terminal domain ABH09_10380 PF00684 DnaJ central domain ABH09_10385 PF00012 Hsp70 protein ABH09_10390 PF01025 GrpE ABH09_10405 PF02386 Cation transport protein ABH09_10415 PF00501 AMP-binding enzyme ABH09_10420 PF00521 DNA gyrase/topoisomerase IV, subunit A ABH09_10425 PF00356 Bacterial regulatory proteins, lacI family ABH09_10440 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10445 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10450 PF02929 Beta galactosidase small chain ABH09_10450 PF16353 Domain of unknown function(DUF4981) ABH09_10450 PF00703 Glycosyl hydrolases family 2 ABH09_10450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ABH09_10450 PF02837 Glycosyl hydrolases family 2, sugar binding domain ABH09_10460 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10465 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10470 PF01547 Bacterial extracellular solute-binding protein ABH09_10475 PF00672 HAMP domain ABH09_10475 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB ABH09_10475 PF08448 PAS fold ABH09_10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABH09_10475 PF00512 His Kinase A (phospho-acceptor) domain ABH09_10480 PF07687 Peptidase dimerisation domain ABH09_10480 PF01546 Peptidase family M20/M25/M40 ABH09_10485 PF00270 DEAD/DEAH box helicase ABH09_10485 PF00271 Helicase conserved C-terminal domain ABH09_10485 PF12300 ATP-dependent RNA helicase RhlB ABH09_10490 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ABH09_10490 PF10371 Domain of unknown function ABH09_10490 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABH09_10490 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ABH09_10490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABH09_10500 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10505 PF00005 ABC transporter ABH09_10510 PF00459 Inositol monophosphatase family ABH09_10525 PF00672 HAMP domain ABH09_10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABH09_10525 PF07730 Histidine kinase ABH09_10570 PF02558 Ketopantoate reductase PanE/ApbA ABH09_10570 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABH09_10575 PF14338 Mrr N-terminal domain ABH09_10575 PF04471 Restriction endonuclease ABH09_10605 PF17932 Tetracyclin repressor-like, C-terminal domain ABH09_10605 PF00440 Bacterial regulatory proteins, tetR family ABH09_10620 PF00005 ABC transporter ABH09_10655 PF01047 MarR family ABH09_10680 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABH09_10680 PF02779 Transketolase, pyrimidine binding domain ABH09_10680 PF02780 Transketolase, C-terminal domain ABH09_10700 PF01263 Aldose 1-epimerase ABH09_10705 PF01991 ATP synthase (E/31 kDa) subunit ABH09_10715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABH09_10715 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABH09_10715 PF16886 ATPsynthase alpha/beta subunit N-term extension ABH09_10720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABH09_10720 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABH09_10725 PF01813 ATP synthase subunit D ABH09_10750 PF01202 Shikimate kinase ABH09_10780 PF06733 DEAD_2 ABH09_10780 PF13307 Helicase C-terminal domain ABH09_10790 PF01668 SmpB protein ABH09_10795 PF10502 Signal peptidase, peptidase S26 ABH09_10800 PF06969 HemN C-terminal domain ABH09_10800 PF04055 Radical SAM superfamily ABH09_10815 PF04055 Radical SAM superfamily ABH09_10815 PF00919 Uncharacterized protein family UPF0004 ABH09_10820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABH09_10825 PF00005 ABC transporter ABH09_10825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABH09_10830 PF00005 ABC transporter ABH09_10835 PF12911 N-terminal TM domain of oligopeptide transport permease C ABH09_10835 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10840 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_10850 PF01381 Helix-turn-helix ABH09_10855 PF01638 HxlR-like helix-turn-helix ABH09_10895 PF06445 GyrI-like small molecule binding domain ABH09_10895 PF12833 Helix-turn-helix domain ABH09_10900 PF00111 2Fe-2S iron-sulfur cluster binding domain ABH09_10900 PF01799 [2Fe-2S] binding domain ABH09_10905 PF03450 CO dehydrogenase flavoprotein C-terminal domain ABH09_10905 PF00941 FAD binding domain in molybdopterin dehydrogenase ABH09_10910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABH09_10910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABH09_10915 PF13382 Adenine deaminase C-terminal domain ABH09_10915 PF01979 Amidohydrolase family ABH09_10920 PF01979 Amidohydrolase family ABH09_10970 PF02661 Fic/DOC family ABH09_10985 PF06745 KaiC ABH09_10985 PF18073 Rubredoxin metal binding domain ABH09_10990 PF00595 PDZ domain ABH09_10995 PF01475 Ferric uptake regulator family ABH09_11005 PF01252 Signal peptidase (SPase) II ABH09_11030 PF00293 NUDIX domain ABH09_11055 PF00708 Acylphosphatase ABH09_11070 PF00700 Bacterial flagellin C-terminal helical region ABH09_11070 PF00669 Bacterial flagellin N-terminal helical region ABH09_11075 PF01713 Smr domain ABH09_11075 PF00488 MutS domain V ABH09_11080 PF00072 Response regulator receiver domain ABH09_11090 PF05872 Bacterial protein of unknown function (DUF853) ABH09_11095 PF01119 DNA mismatch repair protein, C-terminal domain ABH09_11095 PF08676 MutL C terminal dimerisation domain ABH09_11100 PF02609 Exonuclease VII small subunit ABH09_11120 PF02906 Iron only hydrogenase large subunit, C-terminal domain ABH09_11120 PF02256 Iron hydrogenase small subunit ABH09_11120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABH09_11120 PF00037 4Fe-4S binding domain ABH09_11125 PF00037 4Fe-4S binding domain ABH09_11125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABH09_11125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABH09_11220 PF02503 Polyphosphate kinase middle domain ABH09_11220 PF13090 Polyphosphate kinase C-terminal domain 2 ABH09_11220 PF17941 Polyphosphate kinase C-terminal domain 1 ABH09_11220 PF13089 Polyphosphate kinase N-terminal domain ABH09_11225 PF01204 Trehalase ABH09_11230 PF02934 GatB/GatE catalytic domain ABH09_11230 PF02637 GatB domain ABH09_11255 PF17820 PDZ domain ABH09_11255 PF03572 Peptidase family S41 ABH09_11255 PF01471 Putative peptidoglycan binding domain ABH09_11260 PF04452 RNA methyltransferase ABH09_11270 PF01636 Phosphotransferase enzyme family ABH09_11285 PF01196 Ribosomal protein L17 ABH09_11290 PF01000 RNA polymerase Rpb3/RpoA insert domain ABH09_11290 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABH09_11290 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABH09_11295 PF00411 Ribosomal protein S11 ABH09_11300 PF00416 Ribosomal protein S13/S18 ABH09_11305 PF00444 Ribosomal protein L36 ABH09_11310 PF00344 SecY translocase ABH09_11315 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABH09_11320 PF00327 Ribosomal protein L30p/L7e ABH09_11325 PF03719 Ribosomal protein S5, C-terminal domain ABH09_11325 PF00333 Ribosomal protein S5, N-terminal domain ABH09_11330 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABH09_11335 PF00347 Ribosomal protein L6 ABH09_11340 PF00410 Ribosomal protein S8 ABH09_11345 PF00253 Ribosomal protein S14p/S29e ABH09_11350 PF00281 Ribosomal protein L5 ABH09_11350 PF00673 ribosomal L5P family C-terminus ABH09_11355 PF00467 KOW motif ABH09_11355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABH09_11360 PF00238 Ribosomal protein L14p/L23e ABH09_11365 PF00366 Ribosomal protein S17 ABH09_11370 PF00831 Ribosomal L29 protein ABH09_11375 PF00252 Ribosomal protein L16p/L10e ABH09_11380 PF00189 Ribosomal protein S3, C-terminal domain ABH09_11380 PF07650 KH domain ABH09_11385 PF00237 Ribosomal protein L22p/L17e ABH09_11390 PF00203 Ribosomal protein S19 ABH09_11395 PF00181 Ribosomal Proteins L2, RNA binding domain ABH09_11395 PF03947 Ribosomal Proteins L2, C-terminal domain ABH09_11400 PF00276 Ribosomal protein L23 ABH09_11405 PF00573 Ribosomal protein L4/L1 family ABH09_11410 PF00297 Ribosomal protein L3 ABH09_11415 PF00338 Ribosomal protein S10p/S20e ABH09_11420 PF00009 Elongation factor Tu GTP binding domain ABH09_11420 PF03143 Elongation factor Tu C-terminal domain ABH09_11420 PF03144 Elongation factor Tu domain 2 ABH09_11435 PF00994 Probable molybdopterin binding domain ABH09_11445 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_11450 PF00005 ABC transporter ABH09_11450 PF17845 FbpC C-terminal regulatory nucleotide binding domain ABH09_11465 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABH09_11465 PF03484 tRNA synthetase B5 domain ABH09_11480 PF01464 Transglycosylase SLT domain ABH09_11485 PF02673 Bacitracin resistance protein BacA ABH09_11490 PF17854 FtsK alpha domain ABH09_11490 PF09397 Ftsk gamma domain ABH09_11490 PF01580 FtsK/SpoIIIE family ABH09_11495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_11495 PF00672 HAMP domain ABH09_11495 PF02743 Cache domain ABH09_11510 PF01029 NusB family ABH09_11515 PF13145 PPIC-type PPIASE domain ABH09_11520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABH09_11520 PF01411 tRNA synthetases class II (A) ABH09_11525 PF01026 TatD related DNase ABH09_11535 PF03330 Lytic transglycolase ABH09_11620 PF17863 AAA lid domain ABH09_11620 PF07726 ATPase family associated with various cellular activities (AAA) ABH09_11630 PF12392 Collagenase ABH09_11630 PF01136 Peptidase family U32 ABH09_11640 PF01592 NifU-like N terminal domain ABH09_11645 PF00849 RNA pseudouridylate synthase ABH09_11645 PF01479 S4 domain ABH09_11650 PF05491 RuvB C-terminal winged helix domain ABH09_11650 PF17864 RuvB AAA lid domain ABH09_11650 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABH09_11660 PF01134 Glucose inhibited division protein A ABH09_11660 PF13932 GidA associated domain ABH09_11665 PF00962 Adenosine/AMP deaminase ABH09_11670 PF01791 DeoC/LacD family aldolase ABH09_11685 PF03551 Transcriptional regulator PadR-like family ABH09_11695 PF04024 PspC domain ABH09_11745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABH09_11745 PF00381 PTS HPr component phosphorylation site ABH09_11745 PF02896 PEP-utilising enzyme, TIM barrel domain ABH09_11745 PF00391 PEP-utilising enzyme, mobile domain ABH09_11745 PF05524 PEP-utilising enzyme, N-terminal ABH09_11755 PF16363 GDP-mannose 4,6 dehydratase ABH09_11760 PF02446 4-alpha-glucanotransferase ABH09_11765 PF06874 Firmicute fructose-1,6-bisphosphatase ABH09_11775 PF06123 Inner membrane protein CreD ABH09_11780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABH09_11780 PF14572 Phosphoribosyl synthetase-associated domain ABH09_11795 PF12729 Four helix bundle sensory module for signal transduction ABH09_11795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_11795 PF00672 HAMP domain ABH09_11800 PF02229 Transcriptional Coactivator p15 (PC4) ABH09_11830 PF13361 UvrD-like helicase C-terminal domain ABH09_11830 PF00580 UvrD/REP helicase N-terminal domain ABH09_11840 PF01048 Phosphorylase superfamily ABH09_11845 PF01479 S4 domain ABH09_11845 PF00849 RNA pseudouridylate synthase ABH09_11850 PF00300 Histidine phosphatase superfamily (branch 1) ABH09_11865 PF04545 Sigma-70, region 4 ABH09_11865 PF04542 Sigma-70 region 2 ABH09_11865 PF00140 Sigma-70 factor, region 1.2 ABH09_11865 PF03979 Sigma-70 factor, region 1.1 ABH09_11865 PF04539 Sigma-70 region 3 ABH09_11870 PF00166 Chaperonin 10 Kd subunit ABH09_11875 PF17131 Outer membrane lipoprotein-sorting protein ABH09_11890 PF12320 Type 5 capsule protein repressor C-terminal domain ABH09_11890 PF00149 Calcineurin-like phosphoesterase ABH09_11895 PF01297 Zinc-uptake complex component A periplasmic ABH09_11965 PF00580 UvrD/REP helicase N-terminal domain ABH09_11965 PF13361 UvrD-like helicase C-terminal domain ABH09_11970 PF00580 UvrD/REP helicase N-terminal domain ABH09_11970 PF13361 UvrD-like helicase C-terminal domain ABH09_11975 PF00580 UvrD/REP helicase N-terminal domain ABH09_11975 PF13361 UvrD-like helicase C-terminal domain ABH09_11980 PF13361 UvrD-like helicase C-terminal domain ABH09_11980 PF00580 UvrD/REP helicase N-terminal domain ABH09_12090 PF02465 Flagellar hook-associated protein 2 N-terminus ABH09_12090 PF07195 Flagellar hook-associated protein 2 C-terminus ABH09_12095 PF00669 Bacterial flagellin N-terminal helical region ABH09_12095 PF00700 Bacterial flagellin C-terminal helical region ABH09_12100 PF00669 Bacterial flagellin N-terminal helical region ABH09_12100 PF00700 Bacterial flagellin C-terminal helical region ABH09_12115 PF00118 TCP-1/cpn60 chaperonin family ABH09_12120 PF03063 Prismane/CO dehydrogenase family ABH09_12140 PF01515 Phosphate acetyl/butaryl transferase ABH09_12145 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABH09_12150 PF00933 Glycosyl hydrolase family 3 N terminal domain ABH09_12150 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABH09_12155 PF02511 Thymidylate synthase complementing protein ABH09_12165 PF01121 Dephospho-CoA kinase ABH09_12175 PF01551 Peptidase family M23 ABH09_12175 PF04225 Opacity-associated protein A LysM-like domain ABH09_12185 PF05525 Branched-chain amino acid transport protein ABH09_12190 PF01268 Formate--tetrahydrofolate ligase ABH09_12195 PF01467 Cytidylyltransferase-like ABH09_12210 PF03949 Malic enzyme, NAD binding domain ABH09_12210 PF00390 Malic enzyme, N-terminal domain ABH09_12225 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_12255 PF01618 MotA/TolQ/ExbB proton channel family ABH09_12260 PF02472 Biopolymer transport protein ExbD/TolR ABH09_12270 PF00593 TonB dependent receptor ABH09_12270 PF07715 TonB-dependent Receptor Plug Domain ABH09_12280 PF03781 Sulfatase-modifying factor enzyme 1 ABH09_12285 PF00528 Binding-protein-dependent transport system inner membrane component ABH09_12290 PF08402 TOBE domain ABH09_12290 PF00005 ABC transporter ABH09_12295 PF02926 THUMP domain ABH09_12295 PF01170 Putative RNA methylase family UPF0020 ABH09_12300 PF03773 Predicted permease ABH09_12330 PF04552 Sigma-54, DNA binding domain ABH09_12330 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABH09_12330 PF04963 Sigma-54 factor, core binding domain ABH09_12340 PF02796 Helix-turn-helix domain of resolvase ABH09_12340 PF00239 Resolvase, N terminal domain ABH09_12360 PF00271 Helicase conserved C-terminal domain ABH09_12360 PF12137 RNA polymerase recycling family C-terminal ABH09_12360 PF00176 SNF2 family N-terminal domain ABH09_12360 PF18339 RapA N-terminal Tudor like domain 1 ABH09_12360 PF18337 RapA N-terminal Tudor like domain ABH09_12370 PF06071 Protein of unknown function (DUF933) ABH09_12370 PF01926 50S ribosome-binding GTPase ABH09_12375 PF11798 IMS family HHH motif ABH09_12375 PF11799 impB/mucB/samB family C-terminal domain ABH09_12375 PF00817 impB/mucB/samB family ABH09_12385 PF00011 Hsp20/alpha crystallin family ABH09_12390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABH09_12390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABH09_12395 PF00258 Flavodoxin ABH09_12405 PF13185 GAF domain ABH09_12415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABH09_12420 PF00005 ABC transporter ABH09_12425 PF00005 ABC transporter ABH09_12425 PF12704 MacB-like periplasmic core domain ABH09_12425 PF02687 FtsX-like permease family ABH09_12430 PF02687 FtsX-like permease family ABH09_12430 PF12704 MacB-like periplasmic core domain ABH09_12430 PF00005 ABC transporter ABH09_12435 PF00672 HAMP domain ABH09_12435 PF02743 Cache domain ABH09_12435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABH09_12440 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABH09_12445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABH09_12445 PF03129 Anticodon binding domain ABH09_12455 PF03009 Glycerophosphoryl diester phosphodiesterase family ABH09_12460 PF03853 YjeF-related protein N-terminus ABH09_12460 PF01256 Carbohydrate kinase ABH09_12470 PF00365 Phosphofructokinase ABH09_12475 PF00478 IMP dehydrogenase / GMP reductase domain ABH09_12475 PF00571 CBS domain ABH09_12490 PF00588 SpoU rRNA Methylase family ABH09_12495 PF02954 Bacterial regulatory protein, Fis family ABH09_12495 PF00072 Response regulator receiver domain ABH09_12495 PF00158 Sigma-54 interaction domain ABH09_12505 PF02661 Fic/DOC family ABH09_12505 PF12728 Helix-turn-helix domain ABH09_12515 PF01432 Peptidase family M3 ABH09_12515 PF08439 Oligopeptidase F ABH09_12540 PF00291 Pyridoxal-phosphate dependent enzyme ABH09_12540 PF14821 Threonine synthase N terminus ABH09_12560 PF01165 Ribosomal protein S21 ABH09_12565 PF00753 Metallo-beta-lactamase superfamily ABH09_12570 PF00144 Beta-lactamase ABH09_12585 PF00919 Uncharacterized protein family UPF0004 ABH09_12585 PF04055 Radical SAM superfamily ABH09_12585 PF01938 TRAM domain ABH09_12590 PF07943 Penicillin-binding protein 5, C-terminal domain ABH09_12590 PF00768 D-alanyl-D-alanine carboxypeptidase ABH09_12595 PF01551 Peptidase family M23 ABH09_12630 PF01161 Phosphatidylethanolamine-binding protein ABH09_12635 PF01066 CDP-alcohol phosphatidyltransferase ABH09_12640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABH09_12640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABH09_12665 PF00005 ABC transporter ABH09_12690 PF01132 Elongation factor P (EF-P) OB domain ABH09_12690 PF08207 Elongation factor P (EF-P) KOW-like domain ABH09_12690 PF09285 Elongation factor P, C-terminal ABH09_12720 PF02463 RecF/RecN/SMC N terminal domain ABH09_12725 PF00712 DNA polymerase III beta subunit, N-terminal domain ABH09_12725 PF02767 DNA polymerase III beta subunit, central domain ABH09_12725 PF02768 DNA polymerase III beta subunit, C-terminal domain ABH09_12730 PF03102 NeuB family ABH09_12730 PF08666 SAF domain ABH09_12745 PF12804 MobA-like NTP transferase domain ABH09_12750 PF02028 BCCT, betaine/carnitine/choline family transporter ABH09_12755 PF00155 Aminotransferase class I and II