locus-tag	class	description
ABH09_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABH09_00015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABH09_00020	COG0156	8-amino-7-oxononanoate synthase activity
ABH09_00060	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
ABH09_00065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABH09_00070	COG1120	ATPase activity
ABH09_00075	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABH09_00090	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABH09_00095	COG0326	Molecular chaperone. Has ATPase activity
ABH09_00100	COG1162	GTPase activity
ABH09_00110	COG1132	(ABC) transporter
ABH09_00125	COG2378	regulation of single-species biofilm formation
ABH09_00170	COG1132	(ABC) transporter
ABH09_00180	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABH09_00215	COG2183	response to ionizing radiation
ABH09_00230	COG2949	membrane
ABH09_00275	COG0425	Belongs to the sulfur carrier protein TusA family
ABH09_00290	COG1012	belongs to the aldehyde dehydrogenase family
ABH09_00305	COG0673	inositol 2-dehydrogenase activity
ABH09_00310	COG0191	fructose-bisphosphate aldolase activity
ABH09_00315	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABH09_00325	COG1349	DNA-binding transcription factor activity
ABH09_00330	COG1879	ABC-type sugar transport system periplasmic component
ABH09_00335	COG1129	ABC transporter
ABH09_00340	COG1172	Belongs to the binding-protein-dependent transport system permease family
ABH09_00345	COG0673	inositol 2-dehydrogenase activity
ABH09_00360	COG0438	transferase activity, transferring glycosyl groups
ABH09_00360	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABH09_00365	COG0488	(ABC) transporter
ABH09_00385	COG1054	Belongs to the UPF0176 family
ABH09_00390	COG0024	Methionine aminopeptidase
ABH09_00395	COG0484	heat shock protein binding
ABH09_00415	COG0739	heme binding
ABH09_00420	COG0534	Mate efflux family protein
ABH09_00435	COG1129	ABC transporter
ABH09_00560	COG1757	Na H antiporter
ABH09_00565	COG2203	Gaf domain
ABH09_00565	COG2199	diguanylate cyclase activity
ABH09_00645	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABH09_00650	COG1917	Cupin 2, conserved barrel domain protein
ABH09_00650	COG4977	sequence-specific DNA binding
ABH09_00665	COG1129	ABC transporter
ABH09_00670	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABH09_00680	COG2211	Major facilitator Superfamily
ABH09_00685	COG1640	4-alpha-glucanotransferase
ABH09_00690	COG1132	(ABC) transporter
ABH09_00695	COG1132	(ABC) transporter
ABH09_00700	COG2217	Heavy metal translocating P-type atpase
ABH09_00705	COG0640	Transcriptional regulator
ABH09_00720	COG2217	Heavy metal translocating P-type atpase
ABH09_00770	COG1191	sigma factor activity
ABH09_00790	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ABH09_00840	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
ABH09_00845	COG0180	Tryptophanyl-tRNA synthetase
ABH09_00850	COG0670	Belongs to the BI1 family
ABH09_00865	COG2604	Protein of unknown function DUF115
ABH09_00870	COG0768	penicillin binding
ABH09_00875	COG0681	Belongs to the peptidase S26 family
ABH09_01220	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABH09_01230	COG0613	PHP domain protein
ABH09_01255	COG1193	negative regulation of DNA recombination
ABH09_01265	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABH09_01310	COG0629	single-stranded DNA binding
ABH09_01320	COG0281	malic enzyme
ABH09_01325	COG0039	L-malate dehydrogenase activity
ABH09_01365	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ABH09_01375	COG0513	Belongs to the DEAD box helicase family
ABH09_01395	COG0395	ABC-type sugar transport system, permease component
ABH09_01400	COG1175	transmembrane transport
ABH09_01410	COG2011	ABC-type metal ion transport system permease component
ABH09_01420	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_01430	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABH09_01430	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ABH09_01440	COG0351	phosphomethylpyrimidine kinase
ABH09_01500	COG0840	transmembrane signaling receptor activity
ABH09_01525	COG0825	malonyl-CoA metabolic process
ABH09_01530	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABH09_01545	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABH09_01550	COG4656	Part of a membrane complex involved in electron transport
ABH09_01555	COG4658	electron transport chain
ABH09_01560	COG4659	FMN binding
ABH09_01565	COG4660	Part of a membrane complex involved in electron transport
ABH09_01570	COG4657	Part of a membrane complex involved in electron transport
ABH09_01575	COG2878	Part of a membrane complex involved in electron transport
ABH09_01580	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABH09_01585	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABH09_01590	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABH09_01595	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABH09_01605	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABH09_01620	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABH09_01635	COG0653	protein targeting
ABH09_01640	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABH09_01645	COG0450	alkyl hydroperoxide reductase
ABH09_01655	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABH09_01670	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
ABH09_01675	COG1671	Belongs to the UPF0178 family
ABH09_01680	COG3437	response regulator, receiver
ABH09_01685	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABH09_01690	COG1115	amino acid carrier protein
ABH09_01700	COG1472	Belongs to the glycosyl hydrolase 3 family
ABH09_01705	COG3041	Addiction module toxin RelE StbE family
ABH09_01720	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABH09_01735	COG1131	(ABC) transporter
ABH09_01755	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABH09_01790	COG4656	Part of a membrane complex involved in electron transport
ABH09_01800	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
ABH09_01805	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABH09_01820	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ABH09_01825	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ABH09_01825	COG3608	succinylglutamate desuccinylase aspartoacylase
ABH09_01840	COG1121	(ABC) transporter
ABH09_01845	COG1639	'signal transduction protein
ABH09_01850	COG0543	2 iron, 2 sulfur cluster binding
ABH09_01865	COG0733	neurotransmitter:sodium symporter activity
ABH09_01870	COG1744	ABC transporter substrate-binding protein PnrA-like
ABH09_01875	COG1129	ABC transporter
ABH09_01880	COG4603	Belongs to the binding-protein-dependent transport system permease family
ABH09_01885	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABH09_01890	COG3177	Filamentation induced by cAMP protein fic
ABH09_01905	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ABH09_01920	COG4536	flavin adenine dinucleotide binding
ABH09_01935	COG0542	response to heat
ABH09_01970	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABH09_01980	COG0513	Belongs to the DEAD box helicase family
ABH09_01985	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABH09_01990	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABH09_01995	COG1028	Short-chain dehydrogenase reductase Sdr
ABH09_02000	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABH09_02010	COG1647	Serine aminopeptidase, S33
ABH09_02070	COG1309	transcriptional regulator
ABH09_02085	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABH09_02090	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABH09_02090	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ABH09_02135	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ABH09_02140	COG0706	membrane insertase activity
ABH09_02145	COG1847	R3H domain protein
ABH09_02155	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABH09_02160	COG1862	Preprotein translocase
ABH09_02165	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABH09_02170	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABH09_02175	COG1040	competence protein
ABH09_02185	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABH09_02195	COG0058	SHG alpha-glucan phosphorylase activity
ABH09_02210	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ABH09_02215	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABH09_02225	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
ABH09_02230	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABH09_02235	COG0457	Tetratricopeptide repeat
ABH09_02240	COG0733	neurotransmitter:sodium symporter activity
ABH09_02265	COG1102	Psort location Cytoplasmic, score
ABH09_02295	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABH09_02335	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABH09_02340	COG0740	serine-type endopeptidase activity
ABH09_02345	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABH09_02355	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABH09_02375	COG0395	ABC-type sugar transport system, permease component
ABH09_02380	COG4209	transmembrane transport
ABH09_02405	COG1129	ABC transporter
ABH09_02450	COG0481	GTPase activity
ABH09_02475	COG0018	arginyl-trna synthetase
ABH09_02480	COG2235	arginine
ABH09_02485	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABH09_02490	COG0549	Belongs to the carbamate kinase family
ABH09_02495	COG1288	antiporter activity
ABH09_02500	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABH09_02505	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABH09_02510	COG0017	Asparaginyl-tRNA synthetase
ABH09_02620	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABH09_02625	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABH09_02655	COG0747	negative chemotaxis
ABH09_02660	COG0601	transmembrane transport
ABH09_02675	COG4608	Belongs to the ABC transporter superfamily
ABH09_02680	COG1132	(ABC) transporter
ABH09_02685	COG1132	(ABC) transporter
ABH09_02720	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ABH09_02725	COG1362	aminopeptidase activity
ABH09_02760	COG1373	ATPase (AAA superfamily
ABH09_02770	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
ABH09_02805	COG1216	Glycosyl transferase, family 2
ABH09_02815	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABH09_02840	COG1393	Belongs to the ArsC family
ABH09_02900	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABH09_02905	COG1192	Involved in chromosome partitioning
ABH09_02910	COG1475	DNA binding
ABH09_02920	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABH09_02925	COG1418	mRNA catabolic process
ABH09_02950	COG2161	toxin-antitoxin pair type II binding
ABH09_03040	COG2361	Protein of unknown function DUF86
ABH09_03070	COG3549	Plasmid maintenance system killer
ABH09_03085	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABH09_03090	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABH09_03095	COG2203	Gaf domain
ABH09_03095	COG3706	GGDEF domain
ABH09_03095	COG4251	negative regulation of phosphorylation
ABH09_03095	COG5001	Diguanylate cyclase
ABH09_03100	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABH09_03105	COG0205	6-phosphofructokinase activity
ABH09_03110	COG0124	histidyl-tRNA synthetase
ABH09_03120	COG2204	response regulator
ABH09_03125	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
ABH09_03135	COG0840	transmembrane signaling receptor activity
ABH09_03180	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABH09_03195	COG4786	Flagellar basal body rod
ABH09_03205	COG3951	Flagellar rod assembly protein muramidase FlgJ
ABH09_03220	COG1120	ATPase activity
ABH09_03225	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABH09_03240	COG2226	methyltransferase
ABH09_03255	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABH09_03285	COG0251	oxidation-reduction process
ABH09_03300	COG1047	Peptidyl-prolyl cis-trans
ABH09_03305	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABH09_03315	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABH09_03320	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABH09_03330	COG1713	HD superfamily hydrolase involved in NAD metabolism
ABH09_03330	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABH09_03350	COG0779	Required for maturation of 30S ribosomal subunits
ABH09_03360	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABH09_03365	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABH09_03375	COG0196	riboflavin kinase activity
ABH09_03385	COG1185	polyribonucleotide nucleotidyltransferase activity
ABH09_03390	COG0756	dUTP diphosphatase activity
ABH09_03405	COG0840	transmembrane signaling receptor activity
ABH09_03410	COG1253	flavin adenine dinucleotide binding
ABH09_03425	COG0840	transmembrane signaling receptor activity
ABH09_03440	COG0546	phosphoglycolate phosphatase activity
ABH09_03450	COG1609	Transcriptional regulator
ABH09_03455	COG1129	ABC transporter
ABH09_03475	COG0587	DNA-directed DNA polymerase activity
ABH09_03480	COG0762	integral membrane protein
ABH09_03495	COG4211	Belongs to the binding-protein-dependent transport system permease family
ABH09_03500	COG1129	ABC transporter
ABH09_03510	COG1879	ABC-type sugar transport system periplasmic component
ABH09_03520	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABH09_03530	COG0826	peptidase U32
ABH09_03540	COG4166	transmembrane transport
ABH09_03545	COG0601	transmembrane transport
ABH09_03550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABH09_03555	COG0444	Belongs to the ABC transporter superfamily
ABH09_03560	COG4608	Belongs to the ABC transporter superfamily
ABH09_03565	COG0616	signal peptide processing
ABH09_03605	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABH09_03610	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
ABH09_03625	COG0322	excinuclease ABC activity
ABH09_03645	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
ABH09_03675	COG4115	mRNA cleavage
ABH09_03690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABH09_03700	COG0747	negative chemotaxis
ABH09_03710	COG0698	ribose 5-phosphate isomerase
ABH09_03725	COG1132	(ABC) transporter
ABH09_03740	COG1129	ABC transporter
ABH09_03760	COG0456	acetyltransferase
ABH09_03760	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABH09_03805	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ABH09_03820	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ABH09_03825	COG1360	Flagellar Motor Protein
ABH09_03830	COG1580	Controls the rotational direction of flagella during chemotaxis
ABH09_03835	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABH09_03840	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABH09_03840	COG1776	CheC inhibitor of MCP methylation
ABH09_03850	COG1338	Plays a role in the flagellum-specific transport system
ABH09_03855	COG1987	bacterial-type flagellum assembly
ABH09_03860	COG1684	flagellar biosynthetic protein fliR
ABH09_03865	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABH09_03870	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABH09_03875	COG1419	protein localization to endoplasmic reticulum
ABH09_03885	COG0534	Mate efflux family protein
ABH09_03895	COG0557	exoribonuclease II activity
ABH09_03900	COG1362	aminopeptidase activity
ABH09_03910	COG3608	succinylglutamate desuccinylase aspartoacylase
ABH09_03910	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ABH09_03915	COG0525	valine-tRNA ligase activity
ABH09_03935	COG2604	Protein of unknown function DUF115
ABH09_03960	COG4974	Belongs to the 'phage' integrase family
ABH09_03965	COG0551	DNA topoisomerase type I activity
ABH09_03965	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABH09_03970	COG0758	DNA mediated transformation
ABH09_03980	COG0475	glutathione-regulated potassium exporter activity
ABH09_03985	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABH09_03990	COG0672	)-iron permease
ABH09_03995	COG3470	protein probably involved in high-affinity Fe2 transport
ABH09_04010	COG0577	efflux transmembrane transporter activity
ABH09_04010	COG1136	(ABC) transporter
ABH09_04015	COG1136	(ABC) transporter
ABH09_04025	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ABH09_04030	COG3639	organic phosphonate transmembrane transporter activity
ABH09_04050	COG1187	pseudouridine synthase activity
ABH09_04055	COG0217	transcriptional regulatory protein
ABH09_04065	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABH09_04075	COG0813	purine-nucleoside phosphorylase activity
ABH09_04180	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABH09_04200	COG1396	sequence-specific DNA binding
ABH09_04200	COG3800	Transcriptional regulator
ABH09_04215	COG4974	Belongs to the 'phage' integrase family
ABH09_04230	COG1002	Type II restriction enzyme, methylase subunits
ABH09_04240	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
ABH09_04280	COG4974	Belongs to the 'phage' integrase family
ABH09_04320	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ABH09_04325	COG0187	DNA topoisomerase II activity
ABH09_04335	COG3588	fructose-bisphosphate aldolase
ABH09_04340	COG1979	alcohol dehydrogenase
ABH09_04345	COG1477	protein flavinylation
ABH09_04360	COG1464	Belongs to the NlpA lipoprotein family
ABH09_04370	COG0084	hydrolase, TatD family'
ABH09_04375	COG3116	cell division
ABH09_04375	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABH09_04405	COG0488	(ABC) transporter
ABH09_04410	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABH09_04420	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABH09_04425	COG0363	glucosamine-6-phosphate deaminase activity
ABH09_04430	COG0628	permease
ABH09_04435	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABH09_04440	COG0328	RNA-DNA hybrid ribonuclease activity
ABH09_04445	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABH09_04455	COG1175	transmembrane transport
ABH09_04460	COG0395	ABC-type sugar transport system, permease component
ABH09_04510	COG0551	DNA topoisomerase type I activity
ABH09_04510	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABH09_04530	COG4962	Type ii secretion system protein e
ABH09_04555	COG3451	type IV secretory pathway VirB4
ABH09_04580	COG2948	multi-organism process
ABH09_04650	COG2003	Belongs to the UPF0758 family
ABH09_04750	COG1484	DNA-dependent DNA replication
ABH09_04810	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABH09_04815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_04860	COG1921	L-seryl-tRNASec selenium transferase activity
ABH09_04890	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ABH09_04895	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABH09_04900	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABH09_04905	COG0571	ribonuclease III activity
ABH09_04910	COG0840	transmembrane signaling receptor activity
ABH09_04915	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABH09_04935	COG1773	rubredoxin
ABH09_04935	COG0426	domain, Protein
ABH09_04940	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABH09_04945	COG1960	acyl-CoA dehydrogenase activity
ABH09_04950	COG3290	protein histidine kinase activity
ABH09_04950	COG3829	transcription factor binding
ABH09_04955	COG1024	Enoyl-CoA hydratase
ABH09_04960	COG2610	gluconate transmembrane transporter activity
ABH09_04970	COG1960	acyl-CoA dehydrogenase activity
ABH09_04975	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABH09_04985	COG1157	protein secretion by the type III secretion system
ABH09_04990	COG1317	bacterial-type flagellum organization
ABH09_05000	COG1766	The M ring may be actively involved in energy transduction
ABH09_05015	COG1815	bacterial-type flagellum-dependent cell motility
ABH09_05020	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABH09_05025	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABH09_05030	COG3579	cysteine-type endopeptidase activity
ABH09_05040	COG4115	mRNA cleavage
ABH09_05045	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABH09_05050	COG0166	Belongs to the GPI family
ABH09_05055	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABH09_05075	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ABH09_05085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABH09_05090	COG0574	Belongs to the PEP-utilizing enzyme family
ABH09_05090	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABH09_05105	COG2304	oxidoreductase activity
ABH09_05115	COG0183	Belongs to the thiolase family
ABH09_05125	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABH09_05125	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABH09_05130	COG3842	ATPase activity
ABH09_05140	COG0343	queuine tRNA-ribosyltransferase activity
ABH09_05155	COG0840	transmembrane signaling receptor activity
ABH09_05160	COG2358	TRAP transporter, solute receptor (TAXI family
ABH09_05170	COG0708	Exodeoxyribonuclease III
ABH09_05180	COG2832	Protein of unknown function (DUF454)
ABH09_05185	COG1137	ATPase activity
ABH09_05200	COG0493	'glutamate synthase
ABH09_05200	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABH09_05205	COG0402	S-adenosylhomocysteine deaminase activity
ABH09_05220	COG1120	ATPase activity
ABH09_05225	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABH09_05260	COG3620	sequence-specific DNA binding
ABH09_05270	COG3421	Type III restriction
ABH09_05275	COG1509	lysine 2,3-aminomutase activity
ABH09_05280	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABH09_05295	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABH09_05300	COG0840	transmembrane signaling receptor activity
ABH09_05330	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABH09_05335	COG0617	tRNA 3'-terminal CCA addition
ABH09_05340	COG2703	oxygen carrier activity
ABH09_05345	COG1523	belongs to the glycosyl hydrolase 13 family
ABH09_05350	COG2182	Extracellular solute-binding protein
ABH09_05365	COG1175	transmembrane transport
ABH09_05370	COG3833	ABC-type maltose transport systems, permease component
ABH09_05395	COG3118	belongs to the thioredoxin family
ABH09_05405	COG2198	Histidine kinase
ABH09_05405	COG0643	Histidine kinase
ABH09_05410	COG0835	chemotaxis
ABH09_05435	COG0731	radical SAM domain protein
ABH09_05455	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABH09_05475	COG0268	Binds directly to 16S ribosomal RNA
ABH09_05480	COG0776	regulation of translation
ABH09_05485	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ABH09_05495	COG1058	Belongs to the CinA family
ABH09_05495	COG1546	Belongs to the CinA family
ABH09_05500	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABH09_05505	COG0254	rRNA binding
ABH09_05510	COG1272	protein, Hemolysin III
ABH09_05525	COG1131	(ABC) transporter
ABH09_05535	COG4585	Histidine kinase
ABH09_05550	COG1136	(ABC) transporter
ABH09_05600	COG1129	ABC transporter
ABH09_05605	COG0346	lactoylglutathione lyase activity
ABH09_05615	COG1881	PFAM PEBP family protein
ABH09_05620	COG3340	Belongs to the peptidase S51 family
ABH09_05695	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABH09_05725	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABH09_05735	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABH09_05740	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABH09_05745	COG1136	(ABC) transporter
ABH09_05745	COG0577	efflux transmembrane transporter activity
ABH09_05750	COG0840	transmembrane signaling receptor activity
ABH09_05755	COG1472	Belongs to the glycosyl hydrolase 3 family
ABH09_05760	COG3876	Protein conserved in bacteria
ABH09_05770	COG2885	chlorophyll binding
ABH09_05775	COG1388	LysM domain
ABH09_05775	COG0741	lytic transglycosylase activity
ABH09_05800	COG3142	Participates in the control of copper homeostasis
ABH09_05820	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABH09_05825	COG0714	Associated with various cellular activities
ABH09_05840	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABH09_05850	COG2890	protein-(glutamine-N5) methyltransferase activity
ABH09_05855	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABH09_05860	COG0666	response to abiotic stimulus
ABH09_05870	COG4213	ABC transporter substrate-binding protein
ABH09_05880	COG1172	Belongs to the binding-protein-dependent transport system permease family
ABH09_05885	COG1070	Carbohydrate kinase
ABH09_05890	COG2115	Belongs to the xylose isomerase family
ABH09_05900	COG3330	Domain of unknown function (DUF4912)
ABH09_05910	COG0588	phosphoglycerate mutase activity
ABH09_05915	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABH09_05945	COG1086	Polysaccharide biosynthesis protein
ABH09_05955	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABH09_05960	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ABH09_05970	COG0736	holo-[acyl-carrier-protein] synthase activity
ABH09_05980	COG0101	tRNA pseudouridine synthase activity
ABH09_05985	COG0523	cobalamin synthesis protein
ABH09_05990	COG0534	Mate efflux family protein
ABH09_05995	COG1522	sequence-specific DNA binding
ABH09_06000	COG0436	Aminotransferase
ABH09_06005	COG0561	phosphatase activity
ABH09_06015	COG4608	Belongs to the ABC transporter superfamily
ABH09_06020	COG0601	transmembrane transport
ABH09_06025	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABH09_06065	COG1268	BioY protein
ABH09_06070	COG1122	ATPase activity
ABH09_06085	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ABH09_06095	COG0552	protein localization to endoplasmic reticulum
ABH09_06105	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABH09_06110	COG1136	(ABC) transporter
ABH09_06120	COG0142	geranyltranstransferase activity
ABH09_06125	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ABH09_06130	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABH09_06235	COG1309	transcriptional regulator
ABH09_06240	COG1131	(ABC) transporter
ABH09_06405	COG1309	transcriptional regulator
ABH09_06410	COG1132	(ABC) transporter
ABH09_06415	COG1132	(ABC) transporter
ABH09_06420	COG1132	(ABC) transporter
ABH09_06425	COG1132	(ABC) transporter
ABH09_06440	COG4953	penicillin-binding protein 1C
ABH09_06455	COG0724	RNA recognition motif
ABH09_06465	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABH09_06475	COG1196	nuclear chromosome segregation
ABH09_06485	COG0733	neurotransmitter:sodium symporter activity
ABH09_06490	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABH09_06495	COG0457	Tetratricopeptide repeat
ABH09_06500	COG1704	LemA family
ABH09_06515	COG1132	(ABC) transporter
ABH09_06530	COG1802	Transcriptional regulator
ABH09_06535	COG0632	four-way junction helicase activity
ABH09_06540	COG1739	Uncharacterized protein family UPF0029
ABH09_06545	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABH09_06550	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABH09_06560	COG0470	DNA polymerase III
ABH09_06575	COG0305	Participates in initiation and elongation during chromosome replication
ABH09_06580	COG0359	binds to the 23S rRNA
ABH09_06585	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABH09_06590	COG0629	single-stranded DNA binding
ABH09_06595	COG0360	Binds together with S18 to 16S ribosomal RNA
ABH09_06615	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABH09_06620	COG1104	cysteine desulfurase activity
ABH09_06640	COG2208	phosphoserine phosphatase activity
ABH09_06680	COG1230	cation diffusion facilitator family transporter
ABH09_06690	COG1321	iron dependent repressor
ABH09_06695	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABH09_06700	COG1121	(ABC) transporter
ABH09_06705	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABH09_06710	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABH09_06715	COG1683	Conserved Protein
ABH09_06725	COG3869	Catalyzes the specific phosphorylation of arginine residues in
ABH09_06735	COG3290	protein histidine kinase activity
ABH09_06735	COG3829	transcription factor binding
ABH09_06760	COG3852	Histidine kinase
ABH09_06765	COG2204	response regulator
ABH09_06770	COG0823	Involved in the tonB-independent uptake of proteins
ABH09_06790	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABH09_06820	COG0149	triose-phosphate isomerase activity
ABH09_06825	COG1760	l-serine dehydratase
ABH09_06830	COG1760	l-serine dehydratase
ABH09_06850	COG3956	TIGRFAM MazG family protein
ABH09_06855	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABH09_06860	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABH09_06865	COG2604	Protein of unknown function DUF115
ABH09_06875	COG0405	Gamma-glutamyltransferase
ABH09_06895	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ABH09_06910	COG1070	Carbohydrate kinase
ABH09_06930	COG2388	GCN5-related N-acetyl-transferase
ABH09_06955	COG0482	sulfurtransferase activity
ABH09_06980	COG0504	CTP synthase activity
ABH09_06985	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABH09_06985	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABH09_06985	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABH09_07005	COG1293	RNA-binding protein homologous to eukaryotic snRNP
ABH09_07015	COG1487	ribonuclease activity
ABH09_07040	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABH09_07050	COG0569	domain protein
ABH09_07055	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABH09_07070	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABH09_07075	COG1067	ATP-dependent peptidase activity
ABH09_07085	COG0456	acetyltransferase
ABH09_07095	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABH09_07115	COG3177	Filamentation induced by cAMP protein fic
ABH09_07120	COG1129	ABC transporter
ABH09_07130	COG1309	transcriptional regulator
ABH09_07165	COG1309	transcriptional regulator
ABH09_07180	COG0750	zinc metalloprotease
ABH09_07185	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABH09_07190	COG0575	Belongs to the CDS family
ABH09_07195	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABH09_07200	COG0233	cytoplasmic translational termination
ABH09_07205	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABH09_07210	COG0052	Belongs to the universal ribosomal protein uS2 family
ABH09_07215	COG0424	maF-like protein
ABH09_07225	COG0442	prolyl-tRNA aminoacylation
ABH09_07240	COG5341	Protein conserved in bacteria
ABH09_07245	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABH09_07250	COG0835	chemotaxis
ABH09_07255	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABH09_07260	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABH09_07265	COG0497	DNA recombination
ABH09_07315	COG0427	acetyl-CoA hydrolase
ABH09_07320	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABH09_07325	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABH09_07350	COG1454	alcohol dehydrogenase
ABH09_07365	COG1234	tRNA 3'-trailer cleavage
ABH09_07375	COG4254	PFAM FecR protein
ABH09_07385	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABH09_07390	COG0154	amidase activity
ABH09_07395	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABH09_07405	COG2211	Major facilitator Superfamily
ABH09_07440	COG3681	Belongs to the UPF0597 family
ABH09_07445	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ABH09_07455	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABH09_07475	COG1136	(ABC) transporter
ABH09_07485	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABH09_07490	COG0193	aminoacyl-tRNA hydrolase activity
ABH09_07500	COG0357	Ribosomal RNA small subunit methyltransferase G
ABH09_07510	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABH09_07515	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABH09_07545	COG2226	methyltransferase
ABH09_07550	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABH09_07565	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ABH09_07570	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ABH09_07575	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABH09_07590	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ABH09_07605	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABH09_07620	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABH09_07625	COG0519	Catalyzes the synthesis of GMP from XMP
ABH09_07640	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ABH09_07650	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABH09_07655	COG2885	chlorophyll binding
ABH09_07675	COG2373	Large extracellular alpha-helical protein
ABH09_07685	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABH09_07690	COG0785	Cytochrome C biogenesis protein
ABH09_07705	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABH09_07715	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABH09_07725	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABH09_07725	COG1747	RNA polymerase binding
ABH09_07735	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABH09_07755	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABH09_07760	COG0297	glycogen (starch) synthase activity
ABH09_07770	COG0791	NLP P60 protein
ABH09_07775	COG0318	PFAM AMP-dependent synthetase and ligase
ABH09_07780	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABH09_07805	COG4209	transmembrane transport
ABH09_07810	COG0395	ABC-type sugar transport system, permease component
ABH09_07840	COG0228	four-way junction DNA binding
ABH09_07845	COG1837	Belongs to the UPF0109 family
ABH09_07850	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABH09_07855	COG0336	Belongs to the RNA methyltransferase TrmD family
ABH09_07860	COG0335	large ribosomal subunit rRNA binding
ABH09_07895	COG0495	leucyl-tRNA aminoacylation
ABH09_07905	COG1773	rubredoxin
ABH09_07925	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABH09_07945	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABH09_07955	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABH09_07975	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABH09_07995	COG2375	cellular response to nickel ion
ABH09_07995	COG1132	(ABC) transporter
ABH09_08020	COG2801	Transposase and inactivated derivatives
ABH09_08105	COG4988	ABC transporter
ABH09_08110	COG1132	(ABC) transporter
ABH09_08115	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
ABH09_08135	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ABH09_08145	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABH09_08150	COG0285	dihydrofolate synthase activity
ABH09_08155	COG0564	pseudouridine synthase activity
ABH09_08195	COG0330	HflC and HflK could
ABH09_08200	COG0330	HflC and HflK could
ABH09_08215	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABH09_08245	COG0455	bacterial-type flagellum organization
ABH09_08255	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABH09_08265	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABH09_08295	COG0302	gtp cyclohydrolase
ABH09_08295	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABH09_08300	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABH09_08305	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABH09_08320	COG0564	pseudouridine synthase activity
ABH09_08330	COG3735	TraB family
ABH09_08335	COG2001	Belongs to the MraZ family
ABH09_08340	COG0275	rRNA processing
ABH09_08350	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABH09_08355	COG0772	Belongs to the SEDS family
ABH09_08360	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABH09_08370	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABH09_08380	COG1301	dicarboxylic acid transport
ABH09_08390	COG1136	(ABC) transporter
ABH09_08415	COG0577	efflux transmembrane transporter activity
ABH09_08415	COG1136	(ABC) transporter
ABH09_08430	COG0534	Mate efflux family protein
ABH09_08435	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
ABH09_08445	COG1309	transcriptional regulator
ABH09_08450	COG1620	l-lactate permease
ABH09_08455	COG4166	transmembrane transport
ABH09_08465	COG0395	ABC-type sugar transport system, permease component
ABH09_08470	COG1175	transmembrane transport
ABH09_08475	COG1653	transport
ABH09_08490	COG2971	BadF BadG BcrA BcrD
ABH09_08495	COG4886	Leucine-rich repeat (LRR) protein
ABH09_08505	COG2233	PERMEase
ABH09_08525	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABH09_08570	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ABH09_08585	COG1653	transport
ABH09_08615	COG0116	Belongs to the methyltransferase superfamily
ABH09_08615	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ABH09_08620	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ABH09_08625	COG1413	lyase activity
ABH09_08640	COG1482	cell wall glycoprotein biosynthetic process
ABH09_08645	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABH09_08650	COG1573	uracil-dna glycosylase
ABH09_08670	COG1131	(ABC) transporter
ABH09_08675	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABH09_08680	COG0563	adenylate kinase activity
ABH09_08690	COG0772	Belongs to the SEDS family
ABH09_08695	COG0768	penicillin binding
ABH09_08710	COG1077	Cell shape determining protein MreB Mrl
ABH09_08730	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABH09_08735	COG0358	DNA primase activity
ABH09_08740	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABH09_08760	COG3189	MarR family transcriptional regulator
ABH09_08800	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABH09_08800	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABH09_08805	COG3118	belongs to the thioredoxin family
ABH09_08810	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ABH09_08830	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABH09_08850	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABH09_08855	COG0484	heat shock protein binding
ABH09_08860	COG0528	UMP kinase activity
ABH09_08865	COG1305	Transglutaminase-like
ABH09_08880	COG0215	cysteine-tRNA ligase activity
ABH09_08885	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ABH09_08890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABH09_08905	COG2201	protein-glutamate methylesterase activity
ABH09_08945	COG0126	phosphoglycerate kinase activity
ABH09_08955	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABH09_08985	COG1619	proteins homologs of microcin C7 resistance protein MccF
ABH09_09010	COG2801	Transposase and inactivated derivatives
ABH09_09015	COG1401	restriction endodeoxyribonuclease activity
ABH09_09045	COG0574	Belongs to the PEP-utilizing enzyme family
ABH09_09045	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABH09_09050	COG1283	sodium-dependent phosphate transmembrane transporter activity
ABH09_09055	COG0318	PFAM AMP-dependent synthetase and ligase
ABH09_09065	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABH09_09070	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABH09_09070	COG0426	domain, Protein
ABH09_09100	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABH09_09105	COG1480	7TM receptor with intracellular HD hydrolase
ABH09_09125	COG0494	nUDIX hydrolase
ABH09_09130	COG0840	transmembrane signaling receptor activity
ABH09_09145	COG0735	belongs to the Fur family
ABH09_09160	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
ABH09_09165	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
ABH09_09170	COG1924	4 iron, 4 sulfur cluster binding
ABH09_09175	COG0786	glutamate:sodium symporter activity
ABH09_09180	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABH09_09185	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABH09_09190	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABH09_09195	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABH09_09210	COG0786	glutamate:sodium symporter activity
ABH09_09215	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABH09_09220	COG0840	transmembrane signaling receptor activity
ABH09_09235	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_09240	COG0457	Tetratricopeptide repeat
ABH09_09245	COG0037	tRNA processing
ABH09_09250	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABH09_09260	COG2088	sporulation resulting in formation of a cellular spore
ABH09_09270	COG0537	adenosine 5'-monophosphoramidase activity
ABH09_09280	COG0737	Belongs to the 5'-nucleotidase family
ABH09_09300	COG0514	ATP-dependent DNA helicase (RecQ)
ABH09_09315	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABH09_09330	COG0534	Mate efflux family protein
ABH09_09335	COG1309	transcriptional regulator
ABH09_09350	COG0488	(ABC) transporter
ABH09_09370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABH09_09385	COG0049	tRNA binding
ABH09_09400	COG0085	RNA polymerase activity
ABH09_09405	COG0222	ribosome binding
ABH09_09410	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABH09_09415	COG0081	regulation of translation
ABH09_09420	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABH09_09425	COG0250	Participates in transcription elongation, termination and antitermination
ABH09_09430	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABH09_09440	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABH09_09455	COG1438	arginine binding
ABH09_09460	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABH09_09485	COG0301	tRNA thio-modification
ABH09_09495	COG2502	aspartate--ammonia ligase
ABH09_09525	COG0739	heme binding
ABH09_09540	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABH09_09550	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABH09_09555	COG2911	Protein conserved in bacteria
ABH09_09560	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABH09_09570	COG0739	heme binding
ABH09_09585	COG1774	PSP1 C-terminal conserved region
ABH09_09605	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABH09_09610	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ABH09_09615	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABH09_09625	COG0427	acetyl-CoA hydrolase
ABH09_09630	COG1024	Enoyl-CoA hydratase
ABH09_09635	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABH09_09640	COG1309	transcriptional regulator
ABH09_09645	COG0574	Belongs to the PEP-utilizing enzyme family
ABH09_09645	COG3848	Pyruvate phosphate dikinase
ABH09_09655	COG0668	transmembrane transport
ABH09_09660	COG1840	ABC-type Fe3 transport system, periplasmic component
ABH09_09665	COG3842	ATPase activity
ABH09_09675	COG1737	Transcriptional regulator
ABH09_09680	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ABH09_09685	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABH09_09690	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ABH09_09695	COG0284	orotidine-5'-phosphate decarboxylase activity
ABH09_09700	COG0167	dihydroorotate dehydrogenase activity
ABH09_09705	COG0543	2 iron, 2 sulfur cluster binding
ABH09_09710	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
ABH09_09715	COG0540	Belongs to the ATCase OTCase family
ABH09_09735	COG2375	cellular response to nickel ion
ABH09_09735	COG1132	(ABC) transporter
ABH09_09740	COG0500	methyltransferase
ABH09_09750	COG1132	(ABC) transporter
ABH09_09755	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABH09_09760	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABH09_09790	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABH09_09795	COG4603	Belongs to the binding-protein-dependent transport system permease family
ABH09_09800	COG3845	ABC transporter
ABH09_09805	COG1744	ABC transporter substrate-binding protein PnrA-like
ABH09_09810	COG0840	transmembrane signaling receptor activity
ABH09_09815	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABH09_09840	COG0709	Synthesizes selenophosphate from selenide and ATP
ABH09_09845	COG0556	nucleotide-excision repair
ABH09_09850	COG0740	serine-type endopeptidase activity
ABH09_09880	COG0681	Belongs to the peptidase S26 family
ABH09_09885	COG0840	transmembrane signaling receptor activity
ABH09_09920	COG0300	oxidoreductase activity
ABH09_09930	COG2887	Belongs to the helicase family. UvrD subfamily
ABH09_09965	COG1960	acyl-CoA dehydrogenase activity
ABH09_09970	COG1012	belongs to the aldehyde dehydrogenase family
ABH09_09980	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABH09_09995	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
ABH09_10015	COG3437	response regulator, receiver
ABH09_10015	COG2770	Histidine kinase
ABH09_10020	COG1214	PFAM Peptidase M22, glycoprotease
ABH09_10025	COG0802	atpase or kinase
ABH09_10030	COG0564	pseudouridine synthase activity
ABH09_10040	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABH09_10055	COG0297	glycogen (starch) synthase activity
ABH09_10075	COG1966	Carbon starvation protein
ABH09_10080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABH09_10085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABH09_10095	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABH09_10105	COG3845	ABC transporter
ABH09_10110	COG1744	ABC transporter substrate-binding protein PnrA-like
ABH09_10120	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABH09_10125	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABH09_10135	COG1570	exodeoxyribonuclease VII activity
ABH09_10160	COG0719	Fe-S assembly protein
ABH09_10170	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABH09_10175	COG1692	metallophosphoesterase
ABH09_10180	COG3118	belongs to the thioredoxin family
ABH09_10190	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
ABH09_10205	COG1653	transport
ABH09_10210	COG1175	transmembrane transport
ABH09_10215	COG0395	ABC-type sugar transport system, permease component
ABH09_10220	COG1027	Aspartate ammonia-lyase
ABH09_10225	COG0295	cytidine deaminase activity
ABH09_10235	COG0739	heme binding
ABH09_10260	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABH09_10275	COG3876	Protein conserved in bacteria
ABH09_10280	COG2239	Acts as a magnesium transporter
ABH09_10285	COG0170	dolichyl monophosphate biosynthetic process
ABH09_10295	COG2252	PERMEase
ABH09_10305	COG1132	(ABC) transporter
ABH09_10310	COG2375	cellular response to nickel ion
ABH09_10310	COG1132	(ABC) transporter
ABH09_10320	COG1487	ribonuclease activity
ABH09_10330	COG1309	transcriptional regulator
ABH09_10335	COG0617	tRNA 3'-terminal CCA addition
ABH09_10335	COG0617	tRNA 3'-terminal CCA addition
ABH09_10355	COG1205	dead DEAH box helicase
ABH09_10355	COG1111	helicase
ABH09_10380	COG0484	heat shock protein binding
ABH09_10385	COG0443	Heat shock 70 kDa protein
ABH09_10390	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABH09_10405	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABH09_10425	COG1609	Transcriptional regulator
ABH09_10440	COG0395	ABC-type sugar transport system, permease component
ABH09_10450	COG3250	beta-galactosidase activity
ABH09_10460	COG0395	ABC-type sugar transport system, permease component
ABH09_10465	COG1175	transmembrane transport
ABH09_10475	COG5002	protein histidine kinase activity
ABH09_10480	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABH09_10490	COG0674	pyruvate-flavodoxin oxidoreductase activity
ABH09_10490	COG1013	pyruvate-flavodoxin oxidoreductase activity
ABH09_10490	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ABH09_10490	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABH09_10505	COG3842	ATPase activity
ABH09_10510	COG0483	inositol monophosphate 1-phosphatase activity
ABH09_10525	COG4585	Histidine kinase
ABH09_10570	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABH09_10575	COG1715	Restriction endonuclease
ABH09_10605	COG1309	transcriptional regulator
ABH09_10620	COG1129	ABC transporter
ABH09_10655	COG1846	Transcriptional regulator
ABH09_10680	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABH09_10705	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
ABH09_10715	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
ABH09_10720	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
ABH09_10725	COG1394	ATPase activity, coupled to movement of substances
ABH09_10730	COG1269	ATP hydrolysis coupled proton transport
ABH09_10750	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ABH09_10780	COG1199	ATP-dependent helicase activity
ABH09_10790	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABH09_10800	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABH09_10815	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABH09_10820	COG0747	negative chemotaxis
ABH09_10855	COG1733	regulation of RNA biosynthetic process
ABH09_10895	COG3708	Transcriptional regulator
ABH09_10895	COG2207	Transcriptional regulator
ABH09_10905	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ABH09_10910	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABH09_10915	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABH09_10920	COG0402	S-adenosylhomocysteine deaminase activity
ABH09_10985	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ABH09_10990	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_11000	COG0457	Tetratricopeptide repeat
ABH09_11005	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABH09_11055	COG1254	Belongs to the acylphosphatase family
ABH09_11075	COG1193	negative regulation of DNA recombination
ABH09_11090	COG0433	COG0433 Predicted ATPase
ABH09_11095	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABH09_11100	COG1722	exodeoxyribonuclease VII activity
ABH09_11220	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ABH09_11230	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABH09_11255	COG0793	Belongs to the peptidase S41A family
ABH09_11285	COG0203	ribosomal protein L17
ABH09_11290	COG0202	RNA polymerase activity
ABH09_11295	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABH09_11305	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABH09_11315	COG0200	Binds to the 23S rRNA
ABH09_11325	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABH09_11335	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABH09_11340	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABH09_11350	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABH09_11355	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABH09_11360	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABH09_11365	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABH09_11370	COG0255	Belongs to the universal ribosomal protein uL29 family
ABH09_11380	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABH09_11385	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABH09_11395	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABH09_11400	COG0089	rRNA binding
ABH09_11405	COG0088	Forms part of the polypeptide exit tunnel
ABH09_11410	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABH09_11415	COG0051	transcription antitermination factor activity, RNA binding
ABH09_11420	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABH09_11435	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABH09_11440	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABH09_11445	COG4149	molybdate abc transporter
ABH09_11480	COG0741	lytic transglycosylase activity
ABH09_11485	COG1968	undecaprenyl-diphosphatase activity
ABH09_11490	COG1674	ftsk spoiiie
ABH09_11515	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABH09_11520	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABH09_11525	COG0084	hydrolase, TatD family'
ABH09_11535	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABH09_11620	COG0714	Associated with various cellular activities
ABH09_11630	COG0826	peptidase U32
ABH09_11640	COG0822	iron-sulfur transferase activity
ABH09_11645	COG0564	pseudouridine synthase activity
ABH09_11650	COG2255	four-way junction helicase activity
ABH09_11660	COG0445	tRNA wobble uridine modification
ABH09_11670	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ABH09_11685	COG1695	Transcriptional regulator
ABH09_11695	COG1983	PspC domain protein
ABH09_11745	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABH09_11745	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABH09_11745	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABH09_11755	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABH09_11760	COG1640	4-alpha-glucanotransferase
ABH09_11775	COG4452	Inner membrane protein CreD
ABH09_11780	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABH09_11795	COG0840	transmembrane signaling receptor activity
ABH09_11800	COG4443	Transcriptional Coactivator p15 (PC4)
ABH09_11875	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABH09_11890	COG0420	3'-5' exonuclease activity
ABH09_11895	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABH09_12090	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABH09_12090	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ABH09_12095	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABH09_12100	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABH09_12120	COG1151	hydroxylamine reductase activity
ABH09_12140	COG0280	phosphate acetyltransferase
ABH09_12145	COG0492	ferredoxin-NADP+ reductase activity
ABH09_12150	COG1472	Belongs to the glycosyl hydrolase 3 family
ABH09_12155	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
ABH09_12165	COG0237	dephospho-CoA kinase activity
ABH09_12175	COG0739	heme binding
ABH09_12185	COG1114	Component of the transport system for branched-chain amino acids
ABH09_12190	COG2759	Belongs to the formate--tetrahydrofolate ligase family
ABH09_12195	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABH09_12225	COG1177	transmembrane transport
ABH09_12255	COG0811	peptide transport
ABH09_12260	COG0848	biopolymer transport protein
ABH09_12285	COG1176	ABC-type spermidine putrescine transport system, permease component I
ABH09_12290	COG3842	ATPase activity
ABH09_12295	COG0116	Belongs to the methyltransferase superfamily
ABH09_12300	COG0701	Predicted permease
ABH09_12370	COG0012	GTP binding
ABH09_12375	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABH09_12385	COG0071	Belongs to the small heat shock protein (HSP20) family
ABH09_12390	COG0019	diaminopimelate decarboxylase activity
ABH09_12395	COG0716	FMN binding
ABH09_12405	COG1956	GAF domain-containing protein
ABH09_12415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABH09_12420	COG1136	(ABC) transporter
ABH09_12425	COG1136	(ABC) transporter
ABH09_12425	COG0577	efflux transmembrane transporter activity
ABH09_12430	COG0577	efflux transmembrane transporter activity
ABH09_12430	COG1136	(ABC) transporter
ABH09_12435	COG0840	transmembrane signaling receptor activity
ABH09_12440	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABH09_12445	COG0423	glycine-tRNA ligase activity
ABH09_12455	COG0584	glycerophosphoryl diester phosphodiesterase
ABH09_12460	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABH09_12460	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABH09_12470	COG0205	6-phosphofructokinase activity
ABH09_12475	COG0517	IMP dehydrogenase activity
ABH09_12475	COG0516	GMP reductase activity
ABH09_12485	COG1028	Short-chain dehydrogenase reductase Sdr
ABH09_12490	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
ABH09_12495	COG2204	response regulator
ABH09_12505	COG3177	Filamentation induced by cAMP protein fic
ABH09_12540	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABH09_12565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABH09_12570	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABH09_12590	COG1686	Belongs to the peptidase S11 family
ABH09_12595	COG0739	heme binding
ABH09_12630	COG1881	PFAM PEBP family protein
ABH09_12635	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABH09_12640	COG0545	Peptidyl-prolyl cis-trans isomerase
ABH09_12690	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABH09_12720	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABH09_12725	COG0592	DNA-directed DNA polymerase activity
ABH09_12730	COG2089	acid synthase
ABH09_12745	COG4750	Nucleotidyl transferase
ABH09_12750	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABH09_12755	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities