JO41_00010 IPR000064 Endopeptidase, NLPC/P60 domain JO41_00010 IPR038765 JO41_00010 JO41_00040 IPR018597 Bacteriophage Tuc2009, YjcQ JO41_00040 IPR036388 JO41_00040 JO41_00040 IPR036390 JO41_00040 JO41_00045 IPR002104 Integrase, catalytic JO41_00045 IPR011010 DNA breaking-rejoining enzyme, catalytic core JO41_00045 IPR013762 Integrase-like, catalytic core JO41_00050 IPR025714 Methyltransferase domain JO41_00050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_00055 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JO41_00055 IPR011551 NTP pyrophosphohydrolase MazG, bacterial JO41_00070 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JO41_00070 IPR006359 Transcription elongation factor GreA JO41_00070 IPR011990 Tetratricopeptide-like helical domain JO41_00070 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JO41_00070 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JO41_00070 IPR028624 Transcription elongation factor GreA/GreB JO41_00070 IPR036805 JO41_00070 JO41_00070 IPR036953 JO41_00070 JO41_00075 IPR002035 von Willebrand factor, type A JO41_00075 IPR011191 Uncharacterised protein family Treponema vWA JO41_00075 IPR036465 JO41_00075 JO41_00080 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JO41_00080 IPR004839 Aminotransferase, class I/classII JO41_00080 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_00080 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_00080 IPR015424 Pyridoxal phosphate-dependent transferase JO41_00080 IPR025877 MobA-like NTP transferase domain JO41_00080 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00085 IPR008323 Uncharacterised conserved protein UCP033563 JO41_00095 IPR011990 Tetratricopeptide-like helical domain JO41_00095 IPR012962 Peptidase M54, archaemetzincin JO41_00095 IPR024079 Metallopeptidase, catalytic domain JO41_00105 IPR001279 Beta-lactamase-like JO41_00105 IPR013471 Ribonuclease Z/BN JO41_00105 IPR036866 JO41_00105 JO41_00110 IPR013783 Immunoglobulin-like fold JO41_00115 IPR006860 FecR protein JO41_00115 IPR013783 Immunoglobulin-like fold JO41_00120 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase JO41_00120 IPR003660 HAMP linker domain JO41_00120 IPR029787 Nucleotide cyclase JO41_00125 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related JO41_00125 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit JO41_00125 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic JO41_00125 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JO41_00125 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site JO41_00125 IPR018027 Asn/Gln amidotransferase JO41_00125 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JO41_00130 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit JO41_00130 IPR020556 Amidase, conserved site JO41_00130 IPR023631 Amidase signature domain JO41_00130 IPR036928 JO41_00130 JO41_00135 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit JO41_00135 IPR036113 JO41_00135 JO41_00140 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_00140 IPR004090 Chemotaxis methyl-accepting receptor JO41_00140 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_00145 IPR001927 Sodium:galactoside symporter JO41_00145 IPR018043 Sodium:galactoside symporter, conserved site JO41_00145 IPR036259 JO41_00145 JO41_00155 IPR005235 Metallophosphoesterase, MG_246/BB_0505 JO41_00160 IPR011990 Tetratricopeptide-like helical domain JO41_00160 IPR013105 Tetratricopeptide TPR2 JO41_00160 IPR019734 Tetratricopeptide repeat JO41_00165 IPR000788 Ribonucleotide reductase large subunit, C-terminal JO41_00165 IPR005144 ATP-cone JO41_00165 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal JO41_00165 IPR013346 Ribonucleotide reductase, class I , alpha subunit JO41_00165 IPR013509 Ribonucleotide reductase large subunit, N-terminal JO41_00170 IPR006110 RNA polymerase, subunit omega/K/RPB6 JO41_00170 IPR036161 JO41_00170 JO41_00185 IPR007197 Radical SAM JO41_00185 IPR013785 Aldolase-type TIM barrel JO41_00190 IPR002109 Glutaredoxin JO41_00190 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic JO41_00190 IPR036249 JO41_00190 JO41_00195 IPR000307 Ribosomal protein S16 JO41_00195 IPR023803 Ribosomal protein S16 domain JO41_00200 IPR009019 K homology domain, prokaryotic type JO41_00200 IPR020627 Uncharacterised protein family UPF0109 JO41_00205 IPR002676 RimM protein JO41_00205 IPR009000 Translation protein, beta-barrel domain JO41_00205 IPR011033 PRC-barrel-like JO41_00205 IPR011961 16S rRNA processing protein RimM JO41_00205 IPR036976 JO41_00205 JO41_00210 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria JO41_00210 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain JO41_00210 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal JO41_00210 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_00210 IPR029028 Alpha/beta knot methyltransferases JO41_00215 IPR001857 Ribosomal protein L19 JO41_00215 IPR008991 Translation protein SH3-like domain JO41_00215 IPR038657 JO41_00215 JO41_00225 IPR006135 Type III secretion system substrate exporter JO41_00225 IPR029025 Type III secretion system substrate exporter, C-terminal JO41_00235 IPR003509 Uncharacterised protein family UPF0102 JO41_00235 IPR011335 Restriction endonuclease type II-like JO41_00235 IPR011856 tRNA endonuclease-like domain JO41_00250 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JO41_00250 IPR002302 Leucine-tRNA ligase JO41_00250 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JO41_00250 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JO41_00250 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JO41_00250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_00250 IPR015413 Methionyl/Leucyl tRNA synthetase JO41_00250 IPR025709 Leucyl-tRNA synthetase, editing domain JO41_00260 IPR018527 Rubredoxin, iron-binding site JO41_00260 IPR024922 Rubredoxin JO41_00260 IPR024935 Rubredoxin domain JO41_00270 IPR001989 Radical-activating enzyme, conserved site JO41_00270 IPR007197 Radical SAM JO41_00270 IPR013785 Aldolase-type TIM barrel JO41_00270 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted JO41_00275 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JO41_00275 IPR011853 TRAP transporter, 4TM/12TM fusion protein JO41_00280 IPR015001 Protein of unknown function DUF1850 JO41_00285 IPR011852 TRAP transporter solute receptor, TAXI family JO41_00295 IPR003660 HAMP linker domain JO41_00295 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_00295 IPR029151 Periplasmic sensor domain-like JO41_00295 IPR033479 JO41_00295 JO41_00300 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_00305 IPR002616 tRNA-guanine(15) transglycosylase-like JO41_00305 IPR004803 Queuine tRNA-ribosyltransferase JO41_00305 IPR036511 JO41_00305 JO41_00315 IPR012547 Protein of unknown function DUF1703 JO41_00315 IPR018631 AAA-ATPase-like domain JO41_00320 IPR019614 S-adenosylmethionine-dependent methyltransferase JO41_00320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_00325 IPR003781 CoA-binding JO41_00325 IPR009718 Rex DNA-binding, C-terminal domain JO41_00325 IPR022876 Redox-sensing transcriptional repressor Rex JO41_00325 IPR036291 JO41_00325 JO41_00325 IPR036388 JO41_00325 JO41_00325 IPR036390 JO41_00325 JO41_00330 IPR016024 Armadillo-type fold JO41_00335 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JO41_00335 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO41_00340 IPR036691 JO41_00340 JO41_00345 IPR001250 Mannose-6-phosphate isomerase, type I JO41_00345 IPR011051 RmlC-like cupin domain JO41_00345 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form JO41_00345 IPR014710 RmlC-like jelly roll fold JO41_00350 IPR001650 Helicase, C-terminal JO41_00350 IPR005259 Primosomal protein n JO41_00350 IPR011545 DEAD/DEAH box helicase domain JO41_00350 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_00350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00355 IPR005122 Uracil-DNA glycosylase-like JO41_00355 IPR005273 Uracil-DNA glycosylase, family 4 domain JO41_00355 IPR036895 JO41_00355 JO41_00365 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type JO41_00370 IPR001347 Sugar isomerase (SIS) JO41_00370 IPR005486 Glucokinase regulatory protein, conserved site JO41_00370 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ JO41_00375 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase JO41_00385 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_00390 IPR000515 MetI-like domain JO41_00390 IPR035906 JO41_00390 JO41_00395 IPR000515 MetI-like domain JO41_00395 IPR035906 JO41_00395 JO41_00405 IPR000914 Bacterial extracellular solute-binding protein, family 5 JO41_00405 IPR030678 JO41_00405 JO41_00410 IPR003804 L-lactate permease JO41_00415 IPR001647 DNA-binding HTH domain, TetR-type JO41_00415 IPR009057 Homeodomain-like JO41_00420 IPR003607 HD/PDEase domain JO41_00420 IPR006674 HD domain JO41_00430 IPR004697 AbgT JO41_00435 IPR002528 Multi antimicrobial extrusion protein JO41_00440 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_00450 IPR019934 Conserved hypothetical protein CHP03545 JO41_00455 IPR018639 Domain of unknown function DUF2062 JO41_00455 IPR019935 Conserved hypothetical protein CHP03546 JO41_00465 IPR004564 Outer membrane lipoprotein carrier protein LolA-like JO41_00465 IPR029046 Lipoprotein localisation LolA/LolB/LppX JO41_00475 IPR005839 Methylthiotransferase JO41_00475 IPR005840 Ribosomal protein S12 methylthiotransferase RimO JO41_00475 IPR006638 Elongator protein 3/MiaB/NifB JO41_00475 IPR007197 Radical SAM JO41_00475 IPR013848 Methylthiotransferase, N-terminal JO41_00475 IPR020612 Methylthiotransferase, conserved site JO41_00475 IPR023404 Radical SAM, alpha/beta horseshoe JO41_00475 IPR038135 JO41_00475 JO41_00480 IPR031807 JO41_00480 JO41_00480 IPR035069 JO41_00480 JO41_00485 IPR012933 HicA mRNA interferase family JO41_00485 IPR038570 JO41_00485 JO41_00495 IPR003593 AAA+ ATPase domain JO41_00495 IPR006083 Phosphoribulokinase/uridine kinase JO41_00495 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain JO41_00495 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00500 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JO41_00500 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JO41_00500 IPR036754 JO41_00500 JO41_00505 IPR001296 Glycosyl transferase, family 1 JO41_00505 IPR011835 Glycogen/starch synthase, ADP-glucose type JO41_00505 IPR013534 Starch synthase, catalytic domain JO41_00510 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JO41_00510 IPR011032 GroES (chaperonin 10)-like JO41_00510 IPR013149 Alcohol dehydrogenase, C-terminal JO41_00510 IPR013154 Alcohol dehydrogenase GroES-like JO41_00510 IPR020843 Polyketide synthase, enoylreductase JO41_00510 IPR036291 JO41_00510 JO41_00515 IPR003495 CobW/HypB/UreG domain JO41_00515 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JO41_00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00515 IPR036627 JO41_00515 JO41_00520 IPR004254 Hly-III-related JO41_00520 IPR005744 HylII JO41_00525 IPR002150 Ribosomal protein L31 JO41_00525 IPR027491 Ribosomal protein L31 type A JO41_00525 IPR034704 JO41_00525 JO41_00530 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JO41_00530 IPR003593 AAA+ ATPase domain JO41_00530 IPR004665 Transcription termination factor Rho JO41_00530 IPR011112 Rho termination factor, N-terminal JO41_00530 IPR011113 Rho termination factor, RNA-binding JO41_00530 IPR011129 Cold shock protein JO41_00530 IPR012340 Nucleic acid-binding, OB-fold JO41_00530 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00530 IPR036269 JO41_00530 JO41_00545 IPR003010 Carbon-nitrogen hydrolase JO41_00545 IPR004563 Apolipoprotein N-acyltransferase JO41_00545 IPR036526 JO41_00545 JO41_00550 IPR000119 Histone-like bacterial DNA-binding protein JO41_00550 IPR010992 Integration host factor (IHF)-like DNA-binding domain JO41_00555 IPR002583 Ribosomal protein S20 JO41_00555 IPR036510 JO41_00555 JO41_00560 IPR007685 RelA/SpoT JO41_00560 IPR011990 Tetratricopeptide-like helical domain JO41_00560 IPR019734 Tetratricopeptide repeat JO41_00565 IPR006714 Flagellar filament outer layer protein FlaA JO41_00565 IPR016369 Flagellar filament outer layer protein FlaA, Spirochaetes JO41_00570 IPR019606 GerMN domain JO41_00575 IPR002508 Cell wall hydrolase/autolysin, catalytic JO41_00575 IPR036582 JO41_00575 JO41_00580 IPR013815 ATP-grasp fold, subdomain 1 JO41_00580 IPR016185 Pre-ATP-grasp domain JO41_00595 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00600 IPR023885 4Fe4S-binding SPASM domain JO41_00600 IPR027608 Spirochetes SPASM protein JO41_00600 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00605 IPR019606 GerMN domain JO41_00610 IPR011006 CheY-like superfamily JO41_00610 IPR016032 Signal transduction response regulator, C-terminal effector JO41_00610 IPR036388 JO41_00610 JO41_00615 IPR001789 Signal transduction response regulator, receiver domain JO41_00615 IPR011006 CheY-like superfamily JO41_00620 IPR028051 Chemotaxis phosphatase CheX-like domain JO41_00620 IPR028976 CheC-like domain JO41_00625 IPR000780 MCP methyltransferase, CheR-type JO41_00625 IPR002545 CheW-like protein JO41_00625 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JO41_00625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_00625 IPR036061 JO41_00625 JO41_00630 IPR002545 CheW-like protein JO41_00630 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_00630 IPR004105 Histidine kinase CheA-like, homodimeric domain JO41_00630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JO41_00630 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JO41_00630 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding JO41_00630 IPR035891 JO41_00630 JO41_00630 IPR036061 JO41_00630 JO41_00630 IPR036097 JO41_00630 JO41_00630 IPR036641 JO41_00630 JO41_00630 IPR036890 JO41_00630 JO41_00630 IPR037006 JO41_00630 JO41_00630 IPR037052 JO41_00630 JO41_00635 IPR006812 Glycine reductase complex selenoprotein A JO41_00640 IPR006812 Glycine reductase complex selenoprotein A JO41_00645 IPR005746 Thioredoxin JO41_00645 IPR013766 Thioredoxin domain JO41_00645 IPR036249 JO41_00645 JO41_00650 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II JO41_00650 IPR005982 Thioredoxin reductase JO41_00650 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JO41_00650 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JO41_00650 IPR036188 JO41_00650 JO41_00655 IPR002646 Poly A polymerase, head domain JO41_00655 IPR010206 Poly(A) polymerase I JO41_00655 IPR032828 JO41_00655 JO41_00660 IPR004681 TRAP transporter permease protein JO41_00660 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JO41_00665 IPR018389 Bacterial extracellular solute-binding protein, family 7 JO41_00665 IPR038404 JO41_00665 JO41_00670 IPR031823 JO41_00670 JO41_00670 IPR038537 JO41_00670 JO41_00680 IPR016181 Acyl-CoA N-acyltransferase JO41_00680 IPR031165 JO41_00680 JO41_00685 IPR006664 Outer membrane protein, bacterial JO41_00685 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JO41_00685 IPR036737 JO41_00685 JO41_00690 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JO41_00690 IPR019479 Peroxiredoxin, C-terminal JO41_00690 IPR024706 Peroxiredoxin, AhpC-type JO41_00690 IPR036249 JO41_00690 JO41_00695 IPR011055 Duplicated hybrid motif JO41_00695 IPR016047 Peptidase M23 JO41_00695 IPR018392 LysM domain JO41_00695 IPR036779 JO41_00695 JO41_00700 IPR000847 Transcription regulator HTH, LysR JO41_00700 IPR005119 LysR, substrate-binding JO41_00700 IPR036388 JO41_00700 JO41_00700 IPR036390 JO41_00700 JO41_00705 IPR003834 Cytochrome c assembly protein, transmembrane domain JO41_00710 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JO41_00710 IPR017937 Thioredoxin, conserved site JO41_00710 IPR036249 JO41_00710 JO41_00725 IPR001599 Alpha-2-macroglobulin JO41_00725 IPR002890 Alpha-2-macroglobulin, N-terminal JO41_00725 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid JO41_00725 IPR011625 Alpha-2-macroglobulin, N-terminal 2 JO41_00730 IPR012547 Protein of unknown function DUF1703 JO41_00730 IPR018631 AAA-ATPase-like domain JO41_00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00735 IPR024269 Protein of unknown function DUF3791 JO41_00740 IPR025051 Protein of unknown function DUF3990 JO41_00745 IPR024269 Protein of unknown function DUF3791 JO41_00750 IPR001207 Transposase, mutator type JO41_00755 IPR024471 Protein of unknown function DUF2715 JO41_00760 IPR011701 Major facilitator superfamily JO41_00760 IPR036259 JO41_00760 JO41_00765 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JO41_00765 IPR006103 Glycoside hydrolase, family 2, TIM barrel JO41_00765 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JO41_00765 IPR008979 Galactose-binding domain-like JO41_00765 IPR013783 Immunoglobulin-like fold JO41_00765 IPR017853 Glycoside hydrolase, superfamily JO41_00765 IPR036156 JO41_00765 JO41_00770 IPR001264 Glycosyl transferase, family 51 JO41_00770 IPR001460 Penicillin-binding protein, transpeptidase JO41_00770 IPR012338 Beta-lactamase/transpeptidase-like JO41_00770 IPR023346 Lysozyme-like domain JO41_00770 IPR036950 JO41_00770 JO41_00780 IPR006101 Glycoside hydrolase, family 2 JO41_00780 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JO41_00780 IPR006103 Glycoside hydrolase, family 2, TIM barrel JO41_00780 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JO41_00780 IPR008979 Galactose-binding domain-like JO41_00780 IPR013783 Immunoglobulin-like fold JO41_00780 IPR017853 Glycoside hydrolase, superfamily JO41_00780 IPR023230 Glycoside hydrolase, family 2, conserved site JO41_00780 IPR023232 Glycoside hydrolase, family 2, active site JO41_00780 IPR036156 JO41_00780 JO41_00785 IPR003593 AAA+ ATPase domain JO41_00785 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00790 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_00795 IPR000515 MetI-like domain JO41_00795 IPR035906 JO41_00795 JO41_00800 IPR035906 JO41_00800 JO41_00805 IPR000182 GNAT domain JO41_00805 IPR016181 Acyl-CoA N-acyltransferase JO41_00815 IPR025714 Methyltransferase domain JO41_00815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_00820 IPR000330 SNF2-related JO41_00820 IPR001650 Helicase, C-terminal JO41_00820 IPR007527 Zinc finger, SWIM-type JO41_00820 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_00820 IPR022138 Helicase SWF/SNF-related JO41_00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00820 IPR038718 JO41_00820 JO41_00825 IPR011042 Six-bladed beta-propeller, TolB-like JO41_00825 IPR011990 Tetratricopeptide-like helical domain JO41_00825 IPR036465 JO41_00825 JO41_00830 IPR011990 Tetratricopeptide-like helical domain JO41_00830 IPR019734 Tetratricopeptide repeat JO41_00835 IPR000705 Galactokinase JO41_00835 IPR006206 Mevalonate/galactokinase JO41_00835 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_00835 IPR019539 Galactokinase galactose-binding domain JO41_00835 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_00835 IPR036554 JO41_00835 JO41_00845 IPR008532 Domain of unknown function DUF814 JO41_00850 IPR003439 ABC transporter-like JO41_00850 IPR003593 AAA+ ATPase domain JO41_00850 IPR017871 ABC transporter, conserved site JO41_00850 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00860 IPR000515 MetI-like domain JO41_00860 IPR035906 JO41_00860 JO41_00865 IPR005948 Thiamine ABC transporter periplasmic binding protein JO41_00875 IPR005338 Anhydro-N-acetylmuramic acid kinase JO41_00885 IPR003148 Regulator of K+ conductance, N-terminal JO41_00885 IPR006037 Regulator of K+ conductance, C-terminal JO41_00885 IPR036291 JO41_00885 JO41_00885 IPR036721 JO41_00885 JO41_00890 IPR001736 Phospholipase D/Transphosphatidylase JO41_00890 IPR025202 Phospholipase D-like domain JO41_00890 IPR027379 Cardiolipin synthase N-terminal JO41_00895 IPR015168 SsuA/THI5-like JO41_00895 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type JO41_00905 IPR003439 ABC transporter-like JO41_00905 IPR003593 AAA+ ATPase domain JO41_00905 IPR017871 ABC transporter, conserved site JO41_00905 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00910 IPR003445 Cation transporter JO41_00910 IPR004772 Potassium uptake protein TrkH family JO41_00915 IPR008269 Peptidase S16, Lon C-terminal JO41_00915 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_00915 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_00915 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00935 IPR026906 Leucine rich repeat 5 JO41_00935 IPR032675 JO41_00935 JO41_00945 IPR018649 Domain of unknown function DUF2078 JO41_00945 IPR039519 JO41_00945 JO41_00960 IPR013653 FR47-like JO41_00960 IPR016181 Acyl-CoA N-acyltransferase JO41_00965 IPR002528 Multi antimicrobial extrusion protein JO41_00980 IPR005627 Copper homeostasis protein CutC JO41_00980 IPR023648 Copper homeostasis CutC domain JO41_00980 IPR036822 JO41_00980 JO41_00985 IPR015077 Domain of unknown function DUF1858 JO41_00985 IPR038062 JO41_00985 JO41_00990 IPR000595 Cyclic nucleotide-binding domain JO41_00990 IPR012318 Helix-turn-helix motif, Crp-type JO41_00990 IPR018490 Cyclic nucleotide-binding-like JO41_00990 IPR036390 JO41_00990 JO41_01005 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_01010 IPR001734 Sodium/solute symporter JO41_01010 IPR038377 JO41_01010 JO41_01015 IPR000101 Gamma-glutamyltranspeptidase JO41_01015 IPR029055 Nucleophile aminohydrolases, N-terminal JO41_01020 IPR004477 ComEC/Rec2-related protein JO41_01025 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase JO41_01025 IPR029787 Nucleotide cyclase JO41_01035 IPR006076 FAD dependent oxidoreductase JO41_01035 IPR007419 BFD-like [2Fe-2S]-binding domain JO41_01035 IPR036188 JO41_01035 JO41_01040 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II JO41_01040 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JO41_01040 IPR036188 JO41_01040 JO41_01045 IPR012460 Protein of unknown function DUF1667 JO41_01045 IPR036593 JO41_01045 JO41_01050 IPR000577 JO41_01050 JO41_01050 IPR018484 Carbohydrate kinase, FGGY, N-terminal JO41_01050 IPR018485 Carbohydrate kinase, FGGY, C-terminal JO41_01055 IPR004113 FAD-linked oxidase, C-terminal JO41_01055 IPR006094 FAD linked oxidase, N-terminal JO41_01055 IPR016164 FAD-linked oxidase-like, C-terminal JO41_01055 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JO41_01055 IPR036318 JO41_01055 JO41_01075 IPR001387 Cro/C1-type helix-turn-helix domain JO41_01075 IPR010982 Lambda repressor-like, DNA-binding domain JO41_01075 IPR013430 Toxin-antitoxin system, antidote protein, HigA JO41_01080 IPR007711 Plasmid maintenance system killer JO41_01080 IPR035093 JO41_01080 JO41_01085 IPR016164 FAD-linked oxidase-like, C-terminal JO41_01090 IPR001670 Alcohol dehydrogenase, iron-type JO41_01090 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JO41_01095 IPR026591 Sirtuin family, catalytic core small domain JO41_01095 IPR029035 DHS-like NAD/FAD-binding domain JO41_01100 IPR000944 Transcription regulator Rrf2-like JO41_01100 IPR036388 JO41_01100 JO41_01100 IPR036390 JO41_01100 JO41_01105 IPR005146 B3/B4 tRNA-binding domain JO41_01105 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JO41_01110 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK JO41_01110 IPR035907 JO41_01110 JO41_01115 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA JO41_01120 IPR005234 Chromosome segregation/condensation protein ScpB JO41_01120 IPR036388 JO41_01120 JO41_01120 IPR036390 JO41_01120 JO41_01130 IPR027396 DsrEFH-like JO41_01135 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_01135 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JO41_01135 IPR020103 Pseudouridine synthase, catalytic domain JO41_01145 IPR002816 Pheromone shutdown, TraB JO41_01150 IPR003444 MraZ JO41_01150 IPR020603 MraZ domain JO41_01150 IPR037914 JO41_01150 JO41_01150 IPR038619 JO41_01150 JO41_01155 IPR002903 Ribosomal RNA small subunit methyltransferase H JO41_01155 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain JO41_01155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_01160 IPR011922 Cell division protein FtsL JO41_01165 IPR000713 Mur ligase, N-terminal JO41_01165 IPR004101 Mur ligase, C-terminal JO41_01165 IPR005863 UDP-MurNAc-pentapeptide synthetase JO41_01165 IPR013221 Mur ligase, central JO41_01165 IPR035911 JO41_01165 JO41_01165 IPR036565 JO41_01165 JO41_01165 IPR036615 JO41_01165 JO41_01170 IPR001182 Cell cycle protein FtsW/RodA JO41_01170 IPR013437 Cell division protein FtsW JO41_01175 IPR005548 Cell division protein FtsQ/DivIB JO41_01175 IPR013685 Polypeptide-transport-associated, FtsQ-type JO41_01180 IPR003494 SHS2 domain inserted in FtsA JO41_01180 IPR020823 Cell division protein FtsA JO41_01185 IPR000158 Cell division protein FtsZ JO41_01185 IPR003008 Tubulin/FtsZ, GTPase domain JO41_01185 IPR008280 Tubulin/FtsZ, C-terminal JO41_01185 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain JO41_01185 IPR020805 Cell division protein FtsZ, conserved site JO41_01185 IPR024757 Cell division protein FtsZ, C-terminal JO41_01185 IPR036525 JO41_01185 JO41_01185 IPR037103 JO41_01185 JO41_01190 IPR002104 Integrase, catalytic JO41_01190 IPR004107 Integrase, SAM-like, N-terminal JO41_01190 IPR010998 Integrase, Lambda-type, N-terminal JO41_01190 IPR011010 DNA breaking-rejoining enzyme, catalytic core JO41_01190 IPR013762 Integrase-like, catalytic core JO41_01195 IPR006042 Xanthine/uracil permease JO41_01195 IPR006043 Xanthine/uracil/vitamin C permease JO41_01200 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JO41_01200 IPR036291 JO41_01200 JO41_01205 IPR004445 Sodium/glutamate symporter JO41_01210 IPR001912 Ribosomal protein S4/S9, N-terminal JO41_01210 IPR002942 RNA-binding S4 domain JO41_01210 IPR005709 Ribosomal protein S4, bacterial-type JO41_01210 IPR018079 Ribosomal protein S4, conserved site JO41_01210 IPR036986 JO41_01210 JO41_01220 IPR018673 Protein of unknown function DUF2141 JO41_01225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_01225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_01225 IPR026816 Flavodoxin domain JO41_01225 IPR029039 Flavoprotein-like JO41_01230 IPR001647 DNA-binding HTH domain, TetR-type JO41_01230 IPR009057 Homeodomain-like JO41_01230 IPR025996 WHG domain JO41_01230 IPR036271 JO41_01230 JO41_01235 IPR000565 DNA topoisomerase, type IIA, subunit B JO41_01235 IPR001241 DNA topoisomerase, type IIA JO41_01235 IPR002288 DNA gyrase B subunit, C-terminal JO41_01235 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_01235 IPR006171 Toprim domain JO41_01235 IPR011557 DNA gyrase, subunit B JO41_01235 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JO41_01235 IPR013759 DNA topoisomerase, type IIA, central domain JO41_01235 IPR013760 DNA topoisomerase, type IIA-like domain JO41_01235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_01235 IPR018522 DNA topoisomerase, type IIA, conserved site JO41_01235 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_01235 IPR036890 JO41_01235 JO41_01240 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JO41_01240 IPR005743 DNA gyrase, subunit A JO41_01240 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel JO41_01240 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain JO41_01240 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JO41_01240 IPR013760 DNA topoisomerase, type IIA-like domain JO41_01240 IPR035516 JO41_01240 JO41_01245 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase JO41_01245 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal JO41_01245 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain JO41_01245 IPR014362 Glutamate dehydrogenase JO41_01245 IPR033524 JO41_01245 JO41_01245 IPR036291 JO41_01245 JO41_01255 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JO41_01275 IPR002300 Aminoacyl-tRNA synthetase, class Ia JO41_01275 IPR002301 Isoleucine-tRNA ligase JO41_01275 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JO41_01275 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JO41_01275 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JO41_01275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_01275 IPR023586 Isoleucine-tRNA ligase, type 2 JO41_01285 IPR007159 AbrB-like domain JO41_01285 IPR037914 JO41_01285 JO41_01290 IPR002716 PIN domain JO41_01290 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_01290 IPR029060 PIN domain-like JO41_01305 IPR018739 Domain of unknown function DUF2281 JO41_01310 IPR000169 Cysteine peptidase, cysteine active site JO41_01310 IPR004134 Peptidase C1B, bleomycin hydrolase JO41_01310 IPR025660 Cysteine peptidase, histidine active site JO41_01310 IPR038765 JO41_01310 JO41_01320 IPR001353 Proteasome, subunit alpha/beta JO41_01320 IPR022281 ATP-dependent protease, HslV subunit JO41_01320 IPR029055 Nucleophile aminohydrolases, N-terminal JO41_01325 IPR003593 AAA+ ATPase domain JO41_01325 IPR003959 ATPase, AAA-type, core JO41_01325 IPR004491 Heat shock protein HslU JO41_01325 IPR019489 Clp ATPase, C-terminal JO41_01325 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01330 IPR006300 Flagellar basal-body rod protein FlgB JO41_01335 IPR001444 Flagellar basal body rod protein, N-terminal JO41_01335 IPR006299 Flagellar basal-body rod protein FlgC JO41_01335 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_01335 IPR019776 Flagellar basal body rod protein, conserved site JO41_01340 IPR001624 Flagellar hook-basal body complex protein FliE JO41_01345 IPR000067 Flagellar M-ring protein FliF JO41_01345 IPR006182 Secretory protein YscJ/FliF JO41_01345 IPR013556 Flagellar M-ring C-terminal JO41_01350 IPR000090 Flagellar motor switch protein FliG JO41_01350 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO41_01350 IPR023087 JO41_01350 JO41_01350 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JO41_01350 IPR032779 JO41_01350 JO41_01355 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JO41_01360 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JO41_01360 IPR003593 AAA+ ATPase domain JO41_01360 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain JO41_01360 IPR005714 ATPase, type III secretion system, FliI/YscN JO41_01360 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JO41_01360 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01365 IPR012823 Flagellar export FliJ JO41_01370 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_01370 IPR004398 RNA methyltransferase, RsmD JO41_01370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_01380 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type JO41_01380 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component JO41_01380 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 JO41_01385 IPR000397 Heat shock protein Hsp33 JO41_01385 IPR016153 Heat shock protein Hsp33, N-terminal JO41_01385 IPR016154 Heat shock protein Hsp33, C-terminal JO41_01390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_01390 IPR004090 Chemotaxis methyl-accepting receptor JO41_01390 IPR025991 Chemoreceptor zinc-binding domain JO41_01395 IPR000999 Ribonuclease III domain JO41_01395 IPR011907 Ribonuclease III JO41_01395 IPR014720 Double-stranded RNA-binding domain JO41_01395 IPR036389 JO41_01395 JO41_01400 IPR003231 Acyl carrier protein (ACP) JO41_01400 IPR009081 Acyl carrier protein-like JO41_01400 IPR036736 JO41_01400 JO41_01405 IPR001608 Alanine racemase, N-terminal JO41_01405 IPR011078 Uncharacterised protein family UPF0001 JO41_01405 IPR029066 PLP-binding barrel JO41_01425 IPR001269 tRNA-dihydrouridine synthase JO41_01425 IPR013785 Aldolase-type TIM barrel JO41_01430 IPR013783 Immunoglobulin-like fold JO41_01430 IPR014756 Immunoglobulin E-set JO41_01430 IPR032640 JO41_01430 JO41_01435 IPR002528 Multi antimicrobial extrusion protein JO41_01440 IPR004534 L-seryl-tRNA selenium transferase JO41_01440 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_01440 IPR015424 Pyridoxal phosphate-dependent transferase JO41_01440 IPR018319 L-seryl-tRNA selenium transferase-like JO41_01445 IPR000795 Elongation factor, GTP-binding domain JO41_01445 IPR004535 Translation elongation factor, selenocysteine-specific JO41_01445 IPR009000 Translation protein, beta-barrel domain JO41_01445 IPR015191 Translation elongation factor SelB, winged helix, type 3 JO41_01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01445 IPR036388 JO41_01445 JO41_01445 IPR036390 JO41_01445 JO41_01450 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_01455 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein JO41_01455 IPR036567 JO41_01455 JO41_01460 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain JO41_01460 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain JO41_01460 IPR036660 JO41_01460 JO41_01480 IPR001279 Beta-lactamase-like JO41_01480 IPR036866 JO41_01480 JO41_01485 IPR001646 Pentapeptide repeat JO41_01490 IPR009197 Microcystin LR degradation protein MlrC JO41_01490 IPR010799 Microcystin LR degradation protein MlrC, C-terminal JO41_01490 IPR015995 Microcystin LR degradation protein MlrC, N-terminal JO41_01495 IPR000515 MetI-like domain JO41_01495 IPR035906 JO41_01495 JO41_01500 IPR000515 MetI-like domain JO41_01500 IPR035906 JO41_01500 JO41_01505 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_01510 IPR003000 Sirtuin family JO41_01510 IPR026591 Sirtuin family, catalytic core small domain JO41_01510 IPR029035 DHS-like NAD/FAD-binding domain JO41_01515 IPR002156 Ribonuclease H domain JO41_01515 IPR012337 Ribonuclease H-like domain JO41_01515 IPR022892 Ribonuclease H JO41_01515 IPR036397 JO41_01515 JO41_01520 IPR006218 DAHP synthetase I/KDSA JO41_01520 IPR006219 DHAP synthase, class 1 JO41_01520 IPR013785 Aldolase-type TIM barrel JO41_01525 IPR002549 Uncharacterised protein family UPF0118 JO41_01530 IPR004547 Glucosamine-6-phosphate isomerase JO41_01530 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase JO41_01530 IPR018321 Glucosamine-6-phosphate isomerase, conserved site JO41_01530 IPR037171 JO41_01530 JO41_01535 IPR003764 N-acetylglucosamine-6-phosphate deacetylase JO41_01535 IPR006680 Amidohydrolase 1 JO41_01535 IPR011059 Metal-dependent hydrolase, composite domain JO41_01535 IPR032466 JO41_01535 JO41_01540 IPR001667 DDH domain JO41_01540 IPR038763 JO41_01540 JO41_01545 IPR003828 Protein of unknown function DUF208 JO41_01550 IPR003439 ABC transporter-like JO41_01550 IPR003593 AAA+ ATPase domain JO41_01550 IPR017871 ABC transporter, conserved site JO41_01550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01550 IPR032524 JO41_01550 JO41_01550 IPR032781 JO41_01550 JO41_01560 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_01575 IPR035196 JO41_01575 JO41_01585 IPR001130 TatD family JO41_01585 IPR015991 Uncharacterised deoxyribonuclease TatD-type JO41_01585 IPR032466 JO41_01585 JO41_01590 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising JO41_01590 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal JO41_01590 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal JO41_01590 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site JO41_01590 IPR035077 JO41_01590 JO41_01590 IPR035078 JO41_01590 JO41_01595 IPR004872 Lipoprotein NlpA family JO41_01600 IPR011990 Tetratricopeptide-like helical domain JO41_01600 IPR019734 Tetratricopeptide repeat JO41_01605 IPR015402 Protein of unknown function DUF1980 JO41_01610 IPR003374 ApbE-like domain JO41_01610 IPR024932 Flavin transferase ApbE JO41_01615 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JO41_01615 IPR017853 Glycoside hydrolase, superfamily JO41_01620 IPR000741 Fructose-bisphosphate aldolase, class-I JO41_01620 IPR013785 Aldolase-type TIM barrel JO41_01620 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type JO41_01630 IPR010106 Conserved hypothetical protein CHP01784 JO41_01645 IPR005835 Nucleotidyl transferase JO41_01645 IPR005836 ADP-glucose pyrophosphorylase, conserved site JO41_01645 IPR011004 Trimeric LpxA-like JO41_01645 IPR011831 Glucose-1-phosphate adenylyltransferase JO41_01645 IPR029044 Nucleotide-diphospho-sugar transferases JO41_01660 IPR025528 Protein of unknown function DUF4415 JO41_01665 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain JO41_01665 IPR029058 Alpha/Beta hydrolase fold JO41_01670 IPR010106 Conserved hypothetical protein CHP01784 JO41_01675 IPR000305 GIY-YIG nuclease superfamily JO41_01675 IPR001162 UvrC family homology region JO41_01675 IPR001943 UVR domain JO41_01675 IPR004791 UvrABC system, subunit C JO41_01675 IPR010994 RuvA domain 2-like JO41_01675 IPR035901 JO41_01675 JO41_01675 IPR036876 JO41_01675 JO41_01675 IPR038476 JO41_01675 JO41_01680 IPR006638 Elongator protein 3/MiaB/NifB JO41_01680 IPR007197 Radical SAM JO41_01680 IPR023404 Radical SAM, alpha/beta horseshoe JO41_01685 IPR002781 Transmembrane protein TauE like JO41_01700 IPR003720 tRNA sulfurtransferase ThiI JO41_01700 IPR004114 THUMP JO41_01700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_01700 IPR020536 Thil, AANH domain JO41_01705 IPR022672 Hexokinase, N-terminal JO41_01705 IPR022673 Hexokinase, C-terminal JO41_01710 IPR004618 Aspartate--ammonia ligase JO41_01720 IPR001173 Glycosyltransferase 2-like JO41_01720 IPR029044 Nucleotide-diphospho-sugar transferases JO41_01735 IPR010106 Conserved hypothetical protein CHP01784 JO41_01740 IPR002876 Transcriptional regulator TACO1-like JO41_01740 IPR017856 Integrase, N-terminal zinc-binding domain-like JO41_01740 IPR026564 Transcriptional regulator TACO1-like, domain 3 JO41_01740 IPR029072 YebC-like JO41_01750 IPR001357 BRCT domain JO41_01750 IPR001679 NAD-dependent DNA ligase JO41_01750 IPR004150 NAD-dependent DNA ligase, OB-fold JO41_01750 IPR010994 RuvA domain 2-like JO41_01750 IPR012340 Nucleic acid-binding, OB-fold JO41_01750 IPR013839 NAD-dependent DNA ligase, adenylation JO41_01750 IPR013840 NAD-dependent DNA ligase, N-terminal JO41_01750 IPR018239 NAD-dependent DNA ligase, active site JO41_01750 IPR036420 JO41_01750 JO41_01755 IPR001638 Extracellular solute-binding protein, family 3 JO41_01760 IPR001638 Extracellular solute-binding protein, family 3 JO41_01760 IPR018313 Extracellular solute-binding protein, family 3, conserved site JO41_01765 IPR024989 Major facilitator superfamily associated domain JO41_01765 IPR036259 JO41_01765 JO41_01770 IPR001303 Class II aldolase/adducin N-terminal JO41_01770 IPR036409 JO41_01770 JO41_01775 IPR000235 Ribosomal protein S5/S7 JO41_01775 IPR005717 Ribosomal protein S7, bacterial/organellar-type JO41_01775 IPR020606 Ribosomal protein S7, conserved site JO41_01775 IPR023798 Ribosomal protein S7 domain JO41_01775 IPR036823 JO41_01775 JO41_01780 IPR005679 Ribosomal protein S12, bacteria JO41_01780 IPR006032 Ribosomal protein S12/S23 JO41_01780 IPR012340 Nucleic acid-binding, OB-fold JO41_01785 IPR000722 RNA polymerase, alpha subunit JO41_01785 IPR006592 RNA polymerase, N-terminal JO41_01785 IPR007066 RNA polymerase Rpb1, domain 3 JO41_01785 IPR007080 RNA polymerase Rpb1, domain 1 JO41_01785 IPR007081 RNA polymerase Rpb1, domain 5 JO41_01785 IPR007083 RNA polymerase Rpb1, domain 4 JO41_01785 IPR012754 DNA-directed RNA polymerase, subunit beta-prime JO41_01785 IPR038120 JO41_01785 JO41_01790 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 JO41_01790 IPR007121 RNA polymerase, beta subunit, conserved site JO41_01790 IPR007641 RNA polymerase Rpb2, domain 7 JO41_01790 IPR007642 RNA polymerase Rpb2, domain 2 JO41_01790 IPR007644 RNA polymerase, beta subunit, protrusion JO41_01790 IPR007645 RNA polymerase Rpb2, domain 3 JO41_01790 IPR010243 DNA-directed RNA polymerase, beta subunit JO41_01790 IPR014724 RNA polymerase Rpb2, OB-fold JO41_01790 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain JO41_01790 IPR037033 JO41_01790 JO41_01790 IPR037034 JO41_01790 JO41_01795 IPR000206 Ribosomal protein L7/L12 JO41_01795 IPR008932 Ribosomal protein L7/L12, oligomerisation JO41_01795 IPR013823 Ribosomal protein L7/L12, C-terminal JO41_01795 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JO41_01795 IPR036235 JO41_01795 JO41_01800 IPR001790 Ribosomal protein L10/acidic P0 JO41_01800 IPR002363 Ribosomal protein L10, eubacterial, conserved site JO41_01800 IPR022973 Ribosomal protein L10 JO41_01805 IPR002143 Ribosomal protein L1 JO41_01805 IPR005878 Ribosomal protein L1, bacterial-type JO41_01805 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JO41_01805 IPR023673 Ribosomal protein L1, conserved site JO41_01805 IPR023674 Ribosomal protein L1-like JO41_01805 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JO41_01810 IPR000911 Ribosomal protein L11/L12 JO41_01810 IPR006519 Ribosomal protein L11, bacterial-type JO41_01810 IPR020783 Ribosomal protein L11, C-terminal JO41_01810 IPR020784 Ribosomal protein L11, N-terminal JO41_01810 IPR020785 Ribosomal protein L11, conserved site JO41_01810 IPR036769 JO41_01810 JO41_01810 IPR036796 JO41_01810 JO41_01815 IPR001062 Transcription antitermination protein, NusG JO41_01815 IPR006645 NusG, N-terminal JO41_01815 IPR008991 Translation protein SH3-like domain JO41_01815 IPR014722 Ribosomal protein L2 domain 2 JO41_01815 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JO41_01815 IPR036735 JO41_01815 JO41_01820 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit JO41_01820 IPR005807 SecE subunit of protein translocation complex JO41_01820 IPR038379 JO41_01820 JO41_01830 IPR001705 Ribosomal protein L33 JO41_01830 IPR011332 Zinc-binding ribosomal protein JO41_01830 IPR018264 Ribosomal protein L33, conserved site JO41_01830 IPR038584 JO41_01830 JO41_01845 IPR001669 Arginine repressor JO41_01845 IPR020899 Arginine repressor, C-terminal JO41_01845 IPR020900 Arginine repressor, DNA-binding domain JO41_01845 IPR036251 JO41_01845 JO41_01845 IPR036388 JO41_01845 JO41_01845 IPR036390 JO41_01845 JO41_01850 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA JO41_01850 IPR036100 JO41_01850 JO41_01855 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_01855 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JO41_01855 IPR020103 Pseudouridine synthase, catalytic domain JO41_01865 IPR001667 DDH domain JO41_01865 IPR003156 DHHA1 domain JO41_01865 IPR038763 JO41_01865 JO41_01870 IPR001584 Integrase, catalytic core JO41_01870 IPR012337 Ribonuclease H-like domain JO41_01870 IPR036397 JO41_01870 JO41_01875 IPR001383 Ribosomal protein L28 JO41_01875 IPR026569 Ribosomal protein L28/L24 JO41_01875 IPR034704 JO41_01875 JO41_01875 IPR037147 JO41_01875 JO41_01880 IPR010412 Protein of unknown function DUF1007 JO41_01885 IPR011541 Nickel/cobalt transporter, high-affinity JO41_01890 IPR009057 Homeodomain-like JO41_01890 IPR018060 DNA binding HTH domain, AraC-type JO41_01890 IPR020449 Transcription regulator HTH, AraC- type JO41_01895 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_01900 IPR003339 ABC/ECF transporter, transmembrane component JO41_01905 IPR003439 ABC transporter-like JO41_01905 IPR003593 AAA+ ATPase domain JO41_01905 IPR017871 ABC transporter, conserved site JO41_01905 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01910 IPR025528 Protein of unknown function DUF4415 JO41_01920 IPR007627 RNA polymerase sigma-70 region 2 JO41_01920 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JO41_01920 IPR013324 RNA polymerase sigma factor, region 3/4 JO41_01920 IPR013325 RNA polymerase sigma factor, region 2 JO41_01920 IPR014284 RNA polymerase sigma-70 like domain JO41_01920 IPR036388 JO41_01920 JO41_01940 IPR002142 Peptidase S49 JO41_01940 IPR004634 Peptidase S49, protease IV JO41_01940 IPR004635 Peptidase S49, SppA JO41_01940 IPR029045 ClpP/crotonase-like domain JO41_01945 IPR003439 ABC transporter-like JO41_01945 IPR003593 AAA+ ATPase domain JO41_01945 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JO41_01945 IPR017871 ABC transporter, conserved site JO41_01945 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01955 IPR000515 MetI-like domain JO41_01955 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JO41_01955 IPR035906 JO41_01955 JO41_01960 IPR000515 MetI-like domain JO41_01960 IPR035906 JO41_01960 JO41_01965 IPR000914 Bacterial extracellular solute-binding protein, family 5 JO41_01965 IPR030678 JO41_01965 JO41_01970 IPR013094 Alpha/beta hydrolase fold-3 JO41_01970 IPR029058 Alpha/Beta hydrolase fold JO41_01975 IPR001539 Peptidase U32 JO41_01980 IPR012674 Calycin JO41_01980 IPR015304 ZinT domain JO41_01985 IPR001650 Helicase, C-terminal JO41_01985 IPR004609 ATP-dependent DNA helicase RecG JO41_01985 IPR011545 DEAD/DEAH box helicase domain JO41_01985 IPR012340 Nucleic acid-binding, OB-fold JO41_01985 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_01985 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01985 IPR033454 JO41_01985 JO41_01990 IPR001173 Glycosyltransferase 2-like JO41_01990 IPR029044 Nucleotide-diphospho-sugar transferases JO41_02000 IPR025669 AAA domain JO41_02000 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02040 IPR003115 ParB/Sulfiredoxin JO41_02040 IPR036086 JO41_02040 JO41_02050 IPR003593 AAA+ ATPase domain JO41_02050 IPR003959 ATPase, AAA-type, core JO41_02050 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02065 IPR001525 C-5 cytosine methyltransferase JO41_02065 IPR018117 DNA methylase, C-5 cytosine-specific, active site JO41_02065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_02140 IPR013610 Domain of unknown function DUF1738 JO41_02145 IPR000330 SNF2-related JO41_02145 IPR001650 Helicase, C-terminal JO41_02145 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_02145 IPR003356 DNA methylase, adenine-specific JO41_02145 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_02145 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_02170 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_02170 IPR035093 JO41_02170 JO41_02195 IPR003343 Bacterial Ig-like, group 2 JO41_02205 IPR010258 Conjugal transfer, TrbG/VirB9/CagX JO41_02205 IPR038161 JO41_02205 JO41_02210 IPR007430 Bacterial virulence protein VirB8 JO41_02210 IPR032710 JO41_02210 JO41_02215 IPR007688 Conjugal transfer, TrbL/VirB6 JO41_02225 IPR003593 AAA+ ATPase domain JO41_02225 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain JO41_02225 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02230 IPR000119 Histone-like bacterial DNA-binding protein JO41_02230 IPR010992 Integration host factor (IHF)-like DNA-binding domain JO41_02235 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB JO41_02250 IPR001482 Type II secretion system protein E JO41_02250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02255 IPR002145 Ribbon-helix-helix protein, copG JO41_02260 IPR001668 Plasmid recombination enzyme JO41_02275 IPR021795 Protein of unknown function DUF3363 JO41_02280 IPR003601 DNA topoisomerase, type IA, domain 2 JO41_02280 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JO41_02280 IPR006171 Toprim domain JO41_02280 IPR013497 DNA topoisomerase, type IA, central JO41_02280 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JO41_02280 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JO41_02280 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JO41_02280 IPR023405 DNA topoisomerase, type IA, core domain JO41_02290 IPR002104 Integrase, catalytic JO41_02290 IPR010998 Integrase, Lambda-type, N-terminal JO41_02290 IPR011010 DNA breaking-rejoining enzyme, catalytic core JO41_02290 IPR013762 Integrase-like, catalytic core JO41_02295 IPR024471 Protein of unknown function DUF2715 JO41_02305 IPR011055 Duplicated hybrid motif JO41_02305 IPR016047 Peptidase M23 JO41_02315 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_02315 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_02320 IPR000432 DNA mismatch repair protein MutS, C-terminal JO41_02320 IPR005748 DNA mismatch repair protein MutS, type 1 JO41_02320 IPR007695 DNA mismatch repair protein MutS-like, N-terminal JO41_02320 IPR007696 DNA mismatch repair protein MutS, core JO41_02320 IPR007860 DNA mismatch repair protein MutS, connector domain JO41_02320 IPR007861 DNA mismatch repair protein MutS, clamp JO41_02320 IPR016151 DNA mismatch repair protein MutS, N-terminal JO41_02320 IPR017261 DNA mismatch repair protein Msh6 JO41_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02320 IPR036187 JO41_02320 JO41_02320 IPR036678 JO41_02320 JO41_02325 IPR005632 Chaperone protein Skp JO41_02325 IPR024930 Skp domain JO41_02330 IPR000184 Bacterial surface antigen (D15) JO41_02330 IPR010827 Surface antigen variable number JO41_02330 IPR023707 Outer membrane protein assembly factor BamA JO41_02335 IPR007452 Protein of unknown function DUF490 JO41_02350 IPR018094 Thymidylate kinase JO41_02350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02350 IPR039430 JO41_02350 JO41_02360 IPR011055 Duplicated hybrid motif JO41_02360 IPR016047 Peptidase M23 JO41_02365 IPR007607 Protein of unknown function DUF583 JO41_02365 IPR011004 Trimeric LpxA-like JO41_02375 IPR007557 PSP1, C-terminal JO41_02380 IPR006626 Parallel beta-helix repeat JO41_02380 IPR011050 Pectin lyase fold/virulence factor JO41_02380 IPR012334 Pectin lyase fold JO41_02380 IPR026906 Leucine rich repeat 5 JO41_02380 IPR032675 JO41_02380 JO41_02385 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain JO41_02385 IPR022687 Iron dependent repressor, N-terminal JO41_02385 IPR022689 Iron dependent repressor, diptheria toxin type JO41_02385 IPR036388 JO41_02385 JO41_02385 IPR036390 JO41_02385 JO41_02385 IPR036421 JO41_02385 JO41_02390 IPR001381 Dehydroquinase class I JO41_02390 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JO41_02390 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal JO41_02390 IPR013785 Aldolase-type TIM barrel JO41_02390 IPR036291 JO41_02390 JO41_02395 IPR004788 Ribose 5-phosphate isomerase, type A JO41_02395 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup JO41_02395 IPR037171 JO41_02395 JO41_02400 IPR000845 Nucleoside phosphorylase domain JO41_02400 IPR010049 MTA/SAH nucleosidase JO41_02400 IPR035994 JO41_02400 JO41_02420 IPR003593 AAA+ ATPase domain JO41_02420 IPR003959 ATPase, AAA-type, core JO41_02420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02425 IPR003425 Uncharacterised protein family Ycf19 JO41_02430 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_02430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_02430 IPR026816 Flavodoxin domain JO41_02430 IPR029039 Flavoprotein-like JO41_02435 IPR003702 Acetyl-CoA hydrolase/transferase JO41_02435 IPR023990 Butyryl-CoA:acetate CoA-transferase JO41_02435 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain JO41_02435 IPR037171 JO41_02435 JO41_02435 IPR038460 JO41_02435 JO41_02440 IPR001753 Crotonase superfamily JO41_02440 IPR014748 Crontonase, C-terminal JO41_02440 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JO41_02440 IPR029045 ClpP/crotonase-like domain JO41_02445 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JO41_02445 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JO41_02445 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site JO41_02445 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JO41_02445 IPR013328 Dehydrogenase, multihelical JO41_02445 IPR022694 3-hydroxyacyl-CoA dehydrogenase JO41_02445 IPR036291 JO41_02445 JO41_02450 IPR001647 DNA-binding HTH domain, TetR-type JO41_02450 IPR009057 Homeodomain-like JO41_02455 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding JO41_02455 IPR008279 PEP-utilising enzyme, mobile domain JO41_02455 IPR013815 ATP-grasp fold, subdomain 1 JO41_02455 IPR036637 JO41_02455 JO41_02460 IPR002528 Multi antimicrobial extrusion protein JO41_02470 IPR001584 Integrase, catalytic core JO41_02470 IPR012337 Ribonuclease H-like domain JO41_02470 IPR036397 JO41_02470 JO41_02475 IPR002514 Transposase IS3/IS911family JO41_02475 IPR009057 Homeodomain-like JO41_02485 IPR003439 ABC transporter-like JO41_02485 IPR003593 AAA+ ATPase domain JO41_02485 IPR008995 Molybdate/tungstate binding, C-terminal JO41_02485 IPR013611 Transport-associated OB, type 2 JO41_02485 IPR017871 ABC transporter, conserved site JO41_02485 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02490 IPR000836 Phosphoribosyltransferase domain JO41_02490 IPR004467 Orotate phosphoribosyl transferase domain JO41_02490 IPR023031 Orotate phosphoribosyltransferase JO41_02490 IPR029057 Phosphoribosyltransferase-like JO41_02495 IPR002195 Dihydroorotase, conserved site JO41_02495 IPR006680 Amidohydrolase 1 JO41_02495 IPR011059 Metal-dependent hydrolase, composite domain JO41_02495 IPR032466 JO41_02495 JO41_02505 IPR001295 Dihydroorotate dehydrogenase, conserved site JO41_02505 IPR005720 Dihydroorotate dehydrogenase domain JO41_02505 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 JO41_02505 IPR013785 Aldolase-type TIM barrel JO41_02505 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 JO41_02505 IPR024920 Dihydroorotate dehydrogenase, class 1 JO41_02515 IPR002801 Aspartate transcarbamylase regulatory subunit JO41_02515 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal JO41_02515 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JO41_02515 IPR036792 JO41_02515 JO41_02515 IPR036793 JO41_02515 JO41_02520 IPR002082 Aspartate carbamoyltransferase JO41_02520 IPR006130 Aspartate/ornithine carbamoyltransferase JO41_02520 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JO41_02520 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JO41_02520 IPR036901 JO41_02520 JO41_02525 IPR006685 Mechanosensitive ion channel MscS JO41_02525 IPR006686 Mechanosensitive ion channel MscS, conserved site JO41_02525 IPR010920 Like-Sm (LSM) domain JO41_02525 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JO41_02525 IPR011066 Mechanosensitive ion channel MscS, C-terminal JO41_02525 IPR023408 JO41_02525 JO41_02530 IPR020483 Uncharacterised protein family YgbA JO41_02535 IPR007318 Phospholipid methyltransferase JO41_02540 IPR003439 ABC transporter-like JO41_02540 IPR003593 AAA+ ATPase domain JO41_02540 IPR011527 ABC transporter type 1, transmembrane domain JO41_02540 IPR017871 ABC transporter, conserved site JO41_02540 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02540 IPR036640 JO41_02540 JO41_02545 IPR019239 Protein of unknown function DUF2191 JO41_02550 IPR002716 PIN domain JO41_02550 IPR029060 PIN domain-like JO41_02555 IPR003439 ABC transporter-like JO41_02555 IPR003593 AAA+ ATPase domain JO41_02555 IPR011527 ABC transporter type 1, transmembrane domain JO41_02555 IPR017871 ABC transporter, conserved site JO41_02555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02555 IPR036640 JO41_02555 JO41_02560 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JO41_02560 IPR004115 GAD-like domain JO41_02560 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JO41_02560 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JO41_02560 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type JO41_02560 IPR012340 Nucleic acid-binding, OB-fold JO41_02560 IPR029351 GAD domain JO41_02565 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JO41_02580 IPR003477 mRNA interferase PemK-like protein JO41_02580 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JO41_02620 IPR000890 Aliphatic acid kinase, short-chain JO41_02620 IPR004372 Acetate/Proprionate kinase JO41_02620 IPR023865 Aliphatic acid kinase, short-chain, conserved site JO41_02625 IPR000182 GNAT domain JO41_02625 IPR016181 Acyl-CoA N-acyltransferase JO41_02630 IPR001989 Radical-activating enzyme, conserved site JO41_02630 IPR007197 Radical SAM JO41_02630 IPR012838 Pyruvate formate-lyase activating enzyme JO41_02630 IPR012839 Glycyl radical enzyme activase JO41_02630 IPR013785 Aldolase-type TIM barrel JO41_02640 IPR001150 Glycine radical domain JO41_02640 IPR004184 Pyruvate formate lyase domain JO41_02640 IPR005949 Formate acetyltransferase JO41_02640 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JO41_02650 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain JO41_02650 IPR002317 Serine-tRNA ligase, type1 JO41_02650 IPR010978 tRNA-binding arm JO41_02650 IPR015866 Serine-tRNA synthetase, type1, N-terminal JO41_02655 IPR004692 Preprotein translocase SecG subunit JO41_02660 IPR000160 GGDEF domain JO41_02660 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily JO41_02660 IPR011110 Two component regulator propeller JO41_02660 IPR011123 Two component regulator three Y JO41_02660 IPR013783 Immunoglobulin-like fold JO41_02660 IPR015943 WD40/YVTN repeat-like-containing domain JO41_02660 IPR029787 Nucleotide cyclase JO41_02665 IPR000640 Translation elongation factor EFG, V domain JO41_02665 IPR000795 Elongation factor, GTP-binding domain JO41_02665 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JO41_02665 IPR004540 Translation elongation factor EFG/EF2 JO41_02665 IPR005225 Small GTP-binding protein domain JO41_02665 IPR005517 Translation elongation factor EFG/EF2, domain IV JO41_02665 IPR009000 Translation protein, beta-barrel domain JO41_02665 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_02665 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_02665 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02665 IPR031157 JO41_02665 JO41_02665 IPR035647 JO41_02665 JO41_02670 IPR000023 Phosphofructokinase domain JO41_02670 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type JO41_02670 IPR012829 Phosphofructokinase, pyrophosphate dependent JO41_02670 IPR022953 Phosphofructokinase JO41_02670 IPR035966 JO41_02670 JO41_02680 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit JO41_02680 IPR015807 Histidine-tRNA ligase JO41_02680 IPR036621 JO41_02680 JO41_02685 IPR000110 Ribosomal protein S1 JO41_02685 IPR003029 Ribosomal protein S1, RNA-binding domain JO41_02685 IPR003136 Cytidylate kinase JO41_02685 IPR011994 Cytidylate kinase domain JO41_02685 IPR012340 Nucleic acid-binding, OB-fold JO41_02685 IPR022967 RNA-binding domain, S1 JO41_02685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02690 IPR002078 RNA polymerase sigma factor 54 interaction domain JO41_02690 IPR002197 DNA binding HTH domain, Fis-type JO41_02690 IPR003018 GAF domain JO41_02690 IPR003593 AAA+ ATPase domain JO41_02690 IPR009057 Homeodomain-like JO41_02690 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02690 IPR029016 GAF domain-like JO41_02695 IPR011990 Tetratricopeptide-like helical domain JO41_02695 IPR019734 Tetratricopeptide repeat JO41_02705 IPR003660 HAMP linker domain JO41_02705 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_02705 IPR029151 Periplasmic sensor domain-like JO41_02705 IPR033479 JO41_02705 JO41_02710 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_02715 IPR001279 Beta-lactamase-like JO41_02715 IPR036866 JO41_02715 JO41_02735 IPR002371 Flagellar hook-associated protein, FlgK JO41_02735 IPR010810 Flagellin hook, IN motif JO41_02735 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_02740 IPR001029 Flagellin, D0/D1 domain JO41_02740 IPR010810 Flagellin hook, IN motif JO41_02740 IPR013384 Flagellar hook-associated protein 3 JO41_02745 IPR003775 Flagellar assembly factor FliW JO41_02745 IPR024046 Flagellar assembly factor FliW domain JO41_02750 IPR003751 Carbon storage regulator JO41_02750 IPR036107 JO41_02750 JO41_02755 IPR003607 HD/PDEase domain JO41_02755 IPR006674 HD domain JO41_02760 IPR000905 Gcp-like domain JO41_02760 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ JO41_02765 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE JO41_02765 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02770 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_02770 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JO41_02770 IPR020103 Pseudouridine synthase, catalytic domain JO41_02775 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p JO41_02775 IPR023267 RNA (C5-cytosine) methyltransferase JO41_02775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_02790 IPR008243 Chorismate mutase, AroH class JO41_02790 IPR035959 JO41_02790 JO41_02795 IPR001296 Glycosyl transferase, family 1 JO41_02795 IPR013534 Starch synthase, catalytic domain JO41_02830 IPR000362 Fumarate lyase family JO41_02830 IPR004708 Aspartate ammonia-lyase JO41_02830 IPR008948 L-Aspartase-like JO41_02830 IPR018951 Fumarase C, C-terminal JO41_02830 IPR020557 Fumarate lyase, conserved site JO41_02830 IPR022761 Fumarate lyase, N-terminal JO41_02830 IPR024083 Fumarase/histidase, N-terminal JO41_02835 IPR002125 CMP/dCMP deaminase, zinc-binding JO41_02835 IPR006262 Cytidine deaminase, homotetrameric JO41_02835 IPR016192 APOBEC/CMP deaminase, zinc-binding JO41_02835 IPR016193 Cytidine deaminase-like JO41_02845 IPR011055 Duplicated hybrid motif JO41_02845 IPR016047 Peptidase M23 JO41_02855 IPR000887 KDPG/KHG aldolase JO41_02855 IPR013785 Aldolase-type TIM barrel JO41_02855 IPR031338 JO41_02855 JO41_02860 IPR001807 Chloride channel, voltage gated JO41_02860 IPR006037 Regulator of K+ conductance, C-terminal JO41_02860 IPR014743 Chloride channel, core JO41_02860 IPR036721 JO41_02860 JO41_02865 IPR006042 Xanthine/uracil permease JO41_02865 IPR006043 Xanthine/uracil/vitamin C permease JO41_02870 IPR006042 Xanthine/uracil permease JO41_02870 IPR006043 Xanthine/uracil/vitamin C permease JO41_02875 IPR003593 AAA+ ATPase domain JO41_02875 IPR004948 Nucleoside-triphosphatase, THEP1 type JO41_02875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02895 IPR001650 Helicase, C-terminal JO41_02895 IPR001943 UVR domain JO41_02895 IPR004807 UvrABC system, subunit B JO41_02895 IPR006935 Helicase/UvrB domain JO41_02895 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_02895 IPR024759 UvrB, YAD/RRR-motif-containing domain JO41_02895 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02895 IPR036876 JO41_02895 JO41_02900 IPR004536 Selenide water dikinase JO41_02900 IPR010918 AIR synthase-related protein, C-terminal domain JO41_02900 IPR016188 PurM, N-terminal-like JO41_02900 IPR023061 Selenide, water dikinase, class I JO41_02900 IPR036676 JO41_02900 JO41_02900 IPR036921 JO41_02900 JO41_02905 IPR002716 PIN domain JO41_02905 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_02905 IPR029060 PIN domain-like JO41_02910 IPR008651 Uncharacterised protein family HicB JO41_02910 IPR010985 Ribbon-helix-helix JO41_02915 IPR001455 TusA-like domain JO41_02915 IPR003787 Sulphur relay, DsrE/F-like protein JO41_02915 IPR019870 Selenium metabolism protein YedF JO41_02915 IPR027396 DsrEFH-like JO41_02915 IPR036868 JO41_02915 JO41_02920 IPR021778 Protein of unknown function DUF3343 JO41_02925 IPR000192 Aminotransferase class V domain JO41_02925 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_02925 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_02925 IPR015424 Pyridoxal phosphate-dependent transferase JO41_02940 IPR012547 Protein of unknown function DUF1703 JO41_02940 IPR018631 AAA-ATPase-like domain JO41_02940 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02945 IPR003760 Basic membrane lipoprotein JO41_02945 IPR028082 Periplasmic binding protein-like I JO41_02950 IPR003439 ABC transporter-like JO41_02950 IPR003593 AAA+ ATPase domain JO41_02950 IPR017871 ABC transporter, conserved site JO41_02950 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02955 IPR001851 ABC transporter, permease JO41_02960 IPR001851 ABC transporter, permease JO41_02975 IPR003675 CAAX amino terminal protease JO41_03005 IPR003607 HD/PDEase domain JO41_03005 IPR004087 K Homology domain JO41_03005 IPR004088 K Homology domain, type 1 JO41_03005 IPR006674 HD domain JO41_03005 IPR006675 Uncharacterised domain HDIG JO41_03005 IPR017705 Ribonuclease Y JO41_03005 IPR022711 Ribonuclease Y, N-terminal JO41_03005 IPR036612 JO41_03005 JO41_03010 IPR001734 Sodium/solute symporter JO41_03010 IPR038377 JO41_03010 JO41_03015 IPR024499 Protein of unknown function DUF2974 JO41_03015 IPR029058 Alpha/Beta hydrolase fold JO41_03020 IPR003115 ParB/Sulfiredoxin JO41_03020 IPR004437 ParB/RepB/Spo0J partition protein family JO41_03020 IPR036086 JO41_03020 JO41_03025 IPR025669 AAA domain JO41_03025 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03030 IPR003111 Peptidase S16, lon N-terminal JO41_03030 IPR003593 AAA+ ATPase domain JO41_03030 IPR003959 ATPase, AAA-type, core JO41_03030 IPR004815 Lon protease, bacterial/eukaryotic-type JO41_03030 IPR008268 Peptidase S16, active site JO41_03030 IPR008269 Peptidase S16, Lon C-terminal JO41_03030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_03030 IPR015947 PUA-like domain JO41_03030 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03030 IPR027543 Lon protease, bacterial JO41_03070 IPR019554 Soluble ligand binding domain JO41_03075 IPR032807 JO41_03075 JO41_03080 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JO41_03080 IPR036291 JO41_03080 JO41_03090 IPR001173 Glycosyltransferase 2-like JO41_03090 IPR029044 Nucleotide-diphospho-sugar transferases JO41_03105 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal JO41_03105 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JO41_03105 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation JO41_03105 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal JO41_03105 IPR017476 UDP-glucose/GDP-mannose dehydrogenase JO41_03105 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase JO41_03105 IPR036220 JO41_03105 JO41_03105 IPR036291 JO41_03105 JO41_03110 IPR003331 UDP-N-acetylglucosamine 2-epimerase JO41_03110 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type JO41_03115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_03115 IPR020022 N-acetyl sugar amidotransferase JO41_03115 IPR022310 NAD/GMP synthase JO41_03120 IPR002797 Polysaccharide biosynthesis protein JO41_03125 IPR007554 CDP-glycerol glycerophosphotransferase JO41_03135 IPR001451 Bacterial transferase hexapeptide repeat JO41_03135 IPR011004 Trimeric LpxA-like JO41_03135 IPR018357 Hexapeptide transferase, conserved site JO41_03140 IPR025420 Domain of unknown function DUF4143 JO41_03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03145 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_03145 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_03145 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_03145 IPR015424 Pyridoxal phosphate-dependent transferase JO41_03150 IPR000683 Oxidoreductase, N-terminal JO41_03150 IPR004104 Oxidoreductase, C-terminal JO41_03150 IPR036291 JO41_03150 JO41_03160 IPR006976 VanZ-like JO41_03165 IPR006628 PUR-alpha/beta/gamma, DNA/RNA-binding JO41_03165 IPR021694 Protein of unknown function DUF3276 JO41_03170 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JO41_03170 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JO41_03170 IPR036900 JO41_03170 JO41_03175 IPR001948 Peptidase M18 JO41_03175 IPR023358 Peptidase M18, domain 2 JO41_03180 IPR001991 Sodium:dicarboxylate symporter JO41_03180 IPR036458 JO41_03180 JO41_03185 IPR001697 Pyruvate kinase JO41_03185 IPR008279 PEP-utilising enzyme, mobile domain JO41_03185 IPR011037 Pyruvate kinase-like, insert domain JO41_03185 IPR015793 Pyruvate kinase, barrel JO41_03185 IPR015795 Pyruvate kinase, C-terminal JO41_03185 IPR015806 Pyruvate kinase, beta-barrel insert domain JO41_03185 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JO41_03185 IPR018209 Pyruvate kinase, active site JO41_03185 IPR036637 JO41_03185 JO41_03185 IPR036918 JO41_03185 JO41_03190 IPR010106 Conserved hypothetical protein CHP01784 JO41_03195 IPR001869 Thiol-activated cytolysin JO41_03195 IPR036359 JO41_03195 JO41_03195 IPR036363 JO41_03195 JO41_03200 IPR000086 NUDIX hydrolase domain JO41_03200 IPR015376 Zinc ribbon, NADH pyrophosphatase JO41_03200 IPR015797 NUDIX hydrolase domain-like JO41_03200 IPR020084 NUDIX hydrolase, conserved site JO41_03200 IPR020476 NUDIX hydrolase JO41_03205 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JO41_03205 IPR016039 Thiolase-like JO41_03210 IPR003664 Fatty acid synthesis PlsX protein JO41_03210 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit JO41_03215 IPR009875 PilZ domain JO41_03220 IPR011990 Tetratricopeptide-like helical domain JO41_03220 IPR019734 Tetratricopeptide repeat JO41_03225 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site JO41_03225 IPR005905 D-alanine--D-alanine ligase JO41_03225 IPR011095 D-alanine--D-alanine ligase, C-terminal JO41_03225 IPR011127 D-alanine--D-alanine ligase, N-terminal domain JO41_03225 IPR013815 ATP-grasp fold, subdomain 1 JO41_03225 IPR016185 Pre-ATP-grasp domain JO41_03230 IPR003706 Carbon starvation protein CstA JO41_03230 IPR025299 CstA C-terminal domain JO41_03240 IPR000843 Transcription regulator HTH, LacI JO41_03240 IPR002139 Ribokinase JO41_03240 IPR010982 Lambda repressor-like, DNA-binding domain JO41_03240 IPR011611 Carbohydrate kinase PfkB JO41_03240 IPR011877 Ribokinase, bacterial JO41_03240 IPR028082 Periplasmic binding protein-like I JO41_03240 IPR029056 Ribokinase-like JO41_03245 IPR002139 Ribokinase JO41_03245 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JO41_03245 IPR011611 Carbohydrate kinase PfkB JO41_03245 IPR011877 Ribokinase, bacterial JO41_03245 IPR029056 Ribokinase-like JO41_03250 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain JO41_03250 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site JO41_03250 IPR036452 JO41_03250 JO41_03255 IPR001851 ABC transporter, permease JO41_03260 IPR001851 ABC transporter, permease JO41_03265 IPR003439 ABC transporter-like JO41_03265 IPR003593 AAA+ ATPase domain JO41_03265 IPR017871 ABC transporter, conserved site JO41_03265 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03270 IPR003760 Basic membrane lipoprotein JO41_03270 IPR028082 Periplasmic binding protein-like I JO41_03275 IPR005502 ADP-ribosylation/Crystallin J1 JO41_03275 IPR036705 JO41_03275 JO41_03280 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JO41_03280 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JO41_03280 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JO41_03280 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site JO41_03280 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JO41_03280 IPR036291 JO41_03280 JO41_03285 IPR008302 Uncharacterised conserved protein UCP016719 JO41_03295 IPR000644 CBS domain JO41_03295 IPR006667 SLC41 divalent cation transporters, integral membrane domain JO41_03295 IPR006668 Magnesium transporter, MgtE intracellular domain JO41_03295 IPR006669 Magnesium transporter MgtE JO41_03295 IPR036739 JO41_03295 JO41_03295 IPR038048 JO41_03295 JO41_03295 IPR038076 JO41_03295 JO41_03310 IPR006043 Xanthine/uracil/vitamin C permease JO41_03310 IPR026033 Purine permease PbuG-like JO41_03315 IPR012340 Nucleic acid-binding, OB-fold JO41_03315 IPR021139 NYN domain, limkain-b1-type JO41_03315 IPR025605 OST-HTH/LOTUS domain JO41_03320 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_03340 IPR011990 Tetratricopeptide-like helical domain JO41_03350 IPR000175 Sodium:neurotransmitter symporter JO41_03350 IPR037272 JO41_03350 JO41_03355 IPR011990 Tetratricopeptide-like helical domain JO41_03355 IPR019734 Tetratricopeptide repeat JO41_03360 IPR029057 Phosphoribosyltransferase-like JO41_03365 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JO41_03365 IPR002904 Lysine-tRNA ligase JO41_03365 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding JO41_03365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_03365 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 JO41_03365 IPR023386 Lysine-tRNA ligase, insertion domain JO41_03370 IPR005790 DNA polymerase III, delta subunit JO41_03370 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JO41_03370 IPR010372 DNA polymerase III, delta JO41_03370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03375 IPR000032 Phosphocarrier HPr protein-like JO41_03375 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JO41_03375 IPR035895 JO41_03375 JO41_03380 IPR003755 HPr(Ser) kinase/phosphorylase JO41_03380 IPR011104 HPr kinase/phosphorylase, C-terminal JO41_03380 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal JO41_03380 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like JO41_03385 IPR000595 Cyclic nucleotide-binding domain JO41_03385 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_03385 IPR014710 RmlC-like jelly roll fold JO41_03385 IPR018490 Cyclic nucleotide-binding-like JO41_03385 IPR036890 JO41_03385 JO41_03390 IPR004193 Glycoside hydrolase, family 13, N-terminal JO41_03390 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JO41_03390 IPR011837 Glycogen debranching enzyme, GlgX type JO41_03390 IPR013780 Glycosyl hydrolase, family 13, all-beta JO41_03390 IPR013783 Immunoglobulin-like fold JO41_03390 IPR014756 Immunoglobulin E-set JO41_03390 IPR017853 Glycoside hydrolase, superfamily JO41_03395 IPR000811 Glycosyl transferase, family 35 JO41_03395 IPR011833 Glycogen/starch/alpha-glucan phosphorylase JO41_03395 IPR035090 JO41_03395 JO41_03400 IPR001564 Nucleoside diphosphate kinase JO41_03400 IPR034907 JO41_03400 JO41_03400 IPR036850 JO41_03400 JO41_03405 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JO41_03405 IPR003593 AAA+ ATPase domain JO41_03405 IPR004125 Signal recognition particle, SRP54 subunit, M-domain JO41_03405 IPR004780 Signal recognition particle protein Ffh JO41_03405 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle JO41_03405 IPR022941 Signal recognition particle, SRP54 subunit JO41_03405 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03405 IPR036891 JO41_03405 JO41_03415 IPR029057 Phosphoribosyltransferase-like JO41_03420 IPR005665 Protein-export membrane protein SecF, bacterial JO41_03420 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03420 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JO41_03425 IPR005791 Protein translocase subunit SecD JO41_03425 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03425 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JO41_03430 IPR003849 Preprotein translocase YajC JO41_03435 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain JO41_03435 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JO41_03435 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site JO41_03435 IPR029000 Cyclophilin-like domain JO41_03445 IPR001374 Single-stranded nucleic acid binding R3H JO41_03445 IPR015946 K homology domain-like, alpha/beta JO41_03445 IPR032782 JO41_03445 JO41_03445 IPR036867 JO41_03445 JO41_03445 IPR038247 JO41_03445 JO41_03450 IPR001708 Membrane insertase OXA1/ALB3/YidC JO41_03450 IPR019998 Membrane insertase YidC JO41_03450 IPR028053 Membrane insertase YidC, N-terminal JO41_03450 IPR028055 Membrane insertase YidC/Oxa1, C-terminal JO41_03450 IPR038210 JO41_03450 JO41_03450 IPR038221 JO41_03450 JO41_03455 IPR000100 Ribonuclease P JO41_03455 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_03455 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_03460 IPR000271 Ribosomal protein L34 JO41_03460 IPR020939 Ribosomal protein L34, conserved site JO41_03470 IPR001932 Protein phosphatase 2C (PP2C)-like domain JO41_03470 IPR003660 HAMP linker domain JO41_03470 IPR036457 JO41_03470 JO41_03475 IPR014044 CAP domain JO41_03475 IPR035940 JO41_03475 JO41_03480 IPR015943 WD40/YVTN repeat-like-containing domain JO41_03480 IPR017853 Glycoside hydrolase, superfamily JO41_03480 IPR025275 Putative glycosyl hydrolase domain DUF4015 JO41_03485 IPR003669 Thymidylate synthase ThyX JO41_03485 IPR036098 JO41_03485 JO41_03490 IPR001764 Glycoside hydrolase, family 3, N-terminal JO41_03490 IPR017853 Glycoside hydrolase, superfamily JO41_03490 IPR036881 JO41_03490 JO41_03490 IPR036962 JO41_03490 JO41_03495 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II JO41_03495 IPR005982 Thioredoxin reductase JO41_03495 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JO41_03495 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JO41_03495 IPR036188 JO41_03495 JO41_03500 IPR002505 Phosphate acetyl/butaryl transferase JO41_03500 IPR004614 Phosphate acetyltransferase JO41_03500 IPR012147 Phosphate acetyl/butyryltransferase JO41_03515 IPR011990 Tetratricopeptide-like helical domain JO41_03520 IPR000504 RNA recognition motif domain JO41_03520 IPR012677 Nucleotide-binding, alpha-beta plait JO41_03520 IPR035979 JO41_03520 JO41_03525 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase JO41_03525 IPR010048 Hydroxylamine reductase JO41_03525 IPR011254 Prismane-like JO41_03525 IPR016099 Prismane-like, alpha/beta-sandwich JO41_03525 IPR016100 Prismane, alpha-bundle JO41_03530 IPR001844 Chaperonin Cpn60 JO41_03530 IPR002423 Chaperonin Cpn60/TCP-1 JO41_03530 IPR018370 Chaperonin Cpn60, conserved site JO41_03530 IPR027409 GroEL-like apical domain JO41_03530 IPR027410 TCP-1-like chaperonin intermediate domain JO41_03530 IPR027413 GroEL-like equatorial domain JO41_03540 IPR002747 S-adenosyl-l-methionine hydroxide adenosyltransferase JO41_03540 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal JO41_03540 IPR026893 Tyrosine/serine-protein phosphatase IphP-type JO41_03540 IPR029021 Protein-tyrosine phosphatase-like JO41_03550 IPR001029 Flagellin, D0/D1 domain JO41_03550 IPR001492 Flagellin JO41_03555 IPR001029 Flagellin, D0/D1 domain JO41_03555 IPR001492 Flagellin JO41_03560 IPR003481 Flagellar hook-associated protein 2, N-terminal JO41_03560 IPR010809 Flagellar hook-associated 2, C-terminal JO41_03575 IPR001986 Enolpyruvate transferase domain JO41_03575 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase JO41_03575 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JO41_03575 IPR036968 JO41_03575 JO41_03580 IPR001650 Helicase, C-terminal JO41_03580 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site JO41_03580 IPR007502 Helicase-associated domain JO41_03580 IPR011545 DEAD/DEAH box helicase domain JO41_03580 IPR011709 Domain of unknown function DUF1605 JO41_03580 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_03580 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03585 IPR012312 Haemerythrin/HHE cation-binding motif JO41_03585 IPR012827 Haemerythrin-like, metal-binding domain JO41_03585 IPR016131 Haemerythrin, iron-binding site JO41_03585 IPR035938 JO41_03585 JO41_03590 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JO41_03590 IPR002305 Aminoacyl-tRNA synthetase, class Ic JO41_03590 IPR002307 Tyrosine-tRNA ligase JO41_03590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_03590 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 JO41_03590 IPR036986 JO41_03590 JO41_03595 IPR012547 Protein of unknown function DUF1703 JO41_03595 IPR018631 AAA-ATPase-like domain JO41_03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03600 IPR003857 Major outer sheath protein, N-terminal JO41_03600 IPR003872 Major outer sheath protein, C-terminal JO41_03615 IPR010106 Conserved hypothetical protein CHP01784 JO41_03625 IPR010106 Conserved hypothetical protein CHP01784 JO41_03630 IPR002319 Phenylalanyl-tRNA synthetase JO41_03630 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit JO41_03630 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal JO41_03630 IPR036390 JO41_03630 JO41_03635 IPR004268 Flagellin assembly, membrane protein MviN JO41_03645 IPR001440 Tetratricopeptide TPR1 JO41_03645 IPR007560 Restriction endonuclease type IV, Mrr JO41_03645 IPR011990 Tetratricopeptide-like helical domain JO41_03645 IPR019734 Tetratricopeptide repeat JO41_03650 IPR018461 Na+/H+ antiporter, NhaC-like JO41_03655 IPR006127 Periplasmic solute binding protein family JO41_03655 IPR006128 Adhesion lipoprotein JO41_03655 IPR006129 Adhesin B JO41_03670 IPR004869 Membrane transport protein, MMPL domain JO41_03675 IPR033399 JO41_03675 JO41_03680 IPR011032 GroES (chaperonin 10)-like JO41_03680 IPR018369 Chaperonin Cpn10, conserved site JO41_03680 IPR020818 Chaperonin Cpn10 JO41_03680 IPR037124 JO41_03680 JO41_03685 IPR000943 RNA polymerase sigma-70 JO41_03685 IPR007624 RNA polymerase sigma-70 region 3 JO41_03685 IPR007627 RNA polymerase sigma-70 region 2 JO41_03685 IPR007630 RNA polymerase sigma-70 region 4 JO41_03685 IPR009042 RNA polymerase sigma-70 region 1.2 JO41_03685 IPR013324 RNA polymerase sigma factor, region 3/4 JO41_03685 IPR013325 RNA polymerase sigma factor, region 2 JO41_03685 IPR014284 RNA polymerase sigma-70 like domain JO41_03685 IPR036388 JO41_03685 JO41_03690 IPR019287 Holliday junction resolvase-related domain JO41_03700 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JO41_03700 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_03700 IPR029033 Histidine phosphatase superfamily JO41_03705 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_03705 IPR020103 Pseudouridine synthase, catalytic domain JO41_03710 IPR000845 Nucleoside phosphorylase domain JO41_03710 IPR011268 Purine nucleoside phosphorylase JO41_03710 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific JO41_03710 IPR035994 JO41_03710 JO41_03720 IPR013986 DExx box DNA helicase domain JO41_03720 IPR014017 DNA helicase, UvrD-like, C-terminal JO41_03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03720 IPR034739 JO41_03720 JO41_03730 IPR010652 Protein of unknown function DUF1232 JO41_03750 IPR025051 Protein of unknown function DUF3990 JO41_03760 IPR003173 Transcriptional coactivator p15 (PC4) JO41_03760 IPR017154 Uncharacterised conserved protein UCP037246 JO41_03765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_03770 IPR003711 CarD-like/TRCF domain JO41_03770 IPR036101 JO41_03770 JO41_03775 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site JO41_03775 IPR029044 Nucleotide-diphospho-sugar transferases JO41_03775 IPR034683 JO41_03775 JO41_03780 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase JO41_03780 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site JO41_03780 IPR036571 JO41_03780 JO41_03790 IPR006439 HAD hydrolase, subfamily IA JO41_03790 IPR023214 HAD-like domain JO41_03790 IPR036412 JO41_03790 JO41_03795 IPR021255 Protein of unknown function DUF2807 JO41_03800 IPR001647 DNA-binding HTH domain, TetR-type JO41_03800 IPR009057 Homeodomain-like JO41_03805 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JO41_03805 IPR017853 Glycoside hydrolase, superfamily JO41_03810 IPR011701 Major facilitator superfamily JO41_03810 IPR036259 JO41_03810 JO41_03815 IPR002510 TldD/PmbA JO41_03815 IPR036059 JO41_03815 JO41_03820 IPR002510 TldD/PmbA JO41_03820 IPR035068 JO41_03820 JO41_03820 IPR036059 JO41_03820 JO41_03825 IPR000073 Alpha/beta hydrolase fold-1 JO41_03825 IPR012354 Esterase/lipase JO41_03825 IPR029058 Alpha/Beta hydrolase fold JO41_03830 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JO41_03830 IPR029069 HotDog domain JO41_03835 IPR014030 Beta-ketoacyl synthase, N-terminal JO41_03835 IPR014031 Beta-ketoacyl synthase, C-terminal JO41_03835 IPR016039 Thiolase-like JO41_03835 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 JO41_03835 IPR018201 Beta-ketoacyl synthase, active site JO41_03835 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JO41_03840 IPR002347 Glucose/ribitol dehydrogenase JO41_03840 IPR020904 Short-chain dehydrogenase/reductase, conserved site JO41_03840 IPR036291 JO41_03840 JO41_03845 IPR001227 Acyl transferase domain JO41_03845 IPR014043 Acyl transferase JO41_03845 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JO41_03845 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JO41_03845 IPR020801 Polyketide synthase, acyl transferase domain JO41_03845 IPR024925 Malonyl CoA-acyl carrier protein transacylase JO41_03850 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 JO41_03850 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal JO41_03850 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JO41_03850 IPR016039 Thiolase-like JO41_03855 IPR001650 Helicase, C-terminal JO41_03855 IPR011545 DEAD/DEAH box helicase domain JO41_03855 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_03855 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03860 IPR001296 Glycosyl transferase, family 1 JO41_03860 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JO41_03865 IPR001288 Translation initiation factor 3 JO41_03865 IPR019813 Translation initiation factor 3, conserved site JO41_03865 IPR019814 Translation initiation factor 3, N-terminal JO41_03865 IPR019815 Translation initiation factor 3, C-terminal JO41_03865 IPR036787 JO41_03865 JO41_03865 IPR036788 JO41_03865 JO41_03870 IPR001706 Ribosomal protein L35, non-mitochondrial JO41_03870 IPR018265 Ribosomal protein L35, conserved site JO41_03870 IPR021137 Ribosomal protein L35 JO41_03870 IPR037229 JO41_03870 JO41_03875 IPR005813 Ribosomal protein L20 JO41_03875 IPR035566 JO41_03875 JO41_03885 IPR007838 Cell division protein ZapA-like JO41_03885 IPR036192 JO41_03885 JO41_03890 IPR003791 Protein of unknown function UPF0178 JO41_03895 IPR003018 GAF domain JO41_03895 IPR003607 HD/PDEase domain JO41_03895 IPR006674 HD domain JO41_03895 IPR029016 GAF domain-like JO41_03900 IPR001160 Peptidase M20C, Xaa-His dipeptidase JO41_03900 IPR002933 Peptidase M20 JO41_03900 IPR011650 Peptidase M20, dimerisation domain JO41_03900 IPR036264 JO41_03900 JO41_03905 IPR001463 Sodium:alanine symporter JO41_03910 IPR000089 Biotin/lipoyl attachment JO41_03910 IPR000891 Pyruvate carboxyltransferase JO41_03910 IPR003379 Carboxylase, conserved domain JO41_03910 IPR005776 Oxaloacetate decarboxylase, alpha subunit JO41_03910 IPR011053 Single hybrid motif JO41_03910 IPR013785 Aldolase-type TIM barrel JO41_03915 IPR001764 Glycoside hydrolase, family 3, N-terminal JO41_03915 IPR017853 Glycoside hydrolase, superfamily JO41_03915 IPR019800 Glycoside hydrolase, family 3, active site JO41_03915 IPR036962 JO41_03915 JO41_03935 IPR003710 Ketopantoate reductase ApbA/PanE JO41_03935 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JO41_03935 IPR013328 Dehydrogenase, multihelical JO41_03935 IPR013332 Ketopantoate reductase, N-terminal domain JO41_03935 IPR013752 Ketopantoate reductase, C-terminal domain JO41_03935 IPR036291 JO41_03935 JO41_03940 IPR003352 Phosphotransferase system, EIIC JO41_03950 IPR000415 Nitroreductase-like JO41_03950 IPR029479 Nitroreductase JO41_03955 IPR003439 ABC transporter-like JO41_03955 IPR003593 AAA+ ATPase domain JO41_03955 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03960 IPR025699 ABC-2 membrane transporter-like JO41_03965 IPR019196 ABC-type uncharacterised transport system JO41_03970 IPR025641 Domain of unknown function DUF4340 JO41_03975 IPR003593 AAA+ ATPase domain JO41_03975 IPR003959 ATPase, AAA-type, core JO41_03975 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JO41_03975 IPR021886 MgsA AAA+ ATPase C-terminal JO41_03975 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03975 IPR032423 JO41_03975 JO41_04005 IPR004338 NADH-quinone reductase NQR2/RnfD JO41_04020 IPR003832 Acid phosphatase/vanadium-dependent haloperoxidase-related JO41_04025 IPR001537 tRNA/rRNA methyltransferase, SpoU type JO41_04025 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_04025 IPR029028 Alpha/beta knot methyltransferases JO41_04030 IPR001670 Alcohol dehydrogenase, iron-type JO41_04035 IPR031316 JO41_04035 JO41_04035 IPR035890 JO41_04035 JO41_04040 IPR000878 Tetrapyrrole methylase JO41_04040 IPR008189 rRNA small subunit methyltransferase I JO41_04040 IPR014776 Tetrapyrrole methylase, subdomain 2 JO41_04040 IPR014777 Tetrapyrrole methylase, subdomain 1 JO41_04040 IPR018063 SAM-dependent methyltransferase RsmI, conserved site JO41_04040 IPR035996 JO41_04040 JO41_04050 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family JO41_04055 IPR008278 4'-phosphopantetheinyl transferase superfamily JO41_04055 IPR037143 JO41_04055 JO41_04065 IPR003439 ABC transporter-like JO41_04065 IPR003593 AAA+ ATPase domain JO41_04065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04070 IPR003607 HD/PDEase domain JO41_04070 IPR006675 Uncharacterised domain HDIG JO41_04070 IPR013976 Metal-dependent hydrolase HDOD JO41_04080 IPR001433 Oxidoreductase FAD/NAD(P)-binding JO41_04080 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit JO41_04080 IPR017938 Riboflavin synthase-like beta-barrel JO41_04080 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain JO41_04080 IPR039261 JO41_04080 JO41_04085 IPR006004 Glutamate synthase (NADPH), homotetrameric JO41_04085 IPR009051 Alpha-helical ferredoxin JO41_04085 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JO41_04085 IPR028261 Dihydroprymidine dehydrogenase domain II JO41_04085 IPR036188 JO41_04085 JO41_04090 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase JO41_04090 IPR011166 Beta-eliminating lyase family JO41_04090 IPR013440 Tryptophanase JO41_04090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_04090 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_04090 IPR015424 Pyridoxal phosphate-dependent transferase JO41_04090 IPR018176 Tryptophanase, conserved site JO41_04095 IPR000175 Sodium:neurotransmitter symporter JO41_04095 IPR037272 JO41_04095 JO41_04100 IPR001667 DDH domain JO41_04100 IPR003156 DHHA1 domain JO41_04100 IPR038763 JO41_04100 JO41_04105 IPR003760 Basic membrane lipoprotein JO41_04105 IPR028082 Periplasmic binding protein-like I JO41_04110 IPR003439 ABC transporter-like JO41_04110 IPR003593 AAA+ ATPase domain JO41_04110 IPR017871 ABC transporter, conserved site JO41_04110 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04115 IPR001851 ABC transporter, permease JO41_04120 IPR001851 ABC transporter, permease JO41_04125 IPR021804 Protein of unknown function DUF3375 JO41_04140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04145 IPR003812 Fido domain JO41_04145 IPR036388 JO41_04145 JO41_04145 IPR036390 JO41_04145 JO41_04145 IPR036597 JO41_04145 JO41_04150 IPR025449 Protein of unknown function DUF4194 JO41_04155 IPR000705 Galactokinase JO41_04155 IPR006204 GHMP kinase N-terminal domain JO41_04155 IPR006206 Mevalonate/galactokinase JO41_04155 IPR013750 GHMP kinase, C-terminal domain JO41_04155 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_04155 IPR019539 Galactokinase galactose-binding domain JO41_04155 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_04155 IPR022963 Galactokinase, bacterial JO41_04155 IPR036554 JO41_04155 JO41_04160 IPR000644 CBS domain JO41_04160 IPR002550 Domain of unknown function DUF21 JO41_04160 IPR005170 Transporter-associated domain JO41_04160 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JO41_04160 IPR036318 JO41_04160 JO41_04175 IPR005325 Protein of unknown function DUF308, membrane JO41_04180 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JO41_04180 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_04185 IPR001270 ClpA/B family JO41_04185 IPR003593 AAA+ ATPase domain JO41_04185 IPR003959 ATPase, AAA-type, core JO41_04185 IPR004176 Clp, N-terminal JO41_04185 IPR017730 Chaperonin ClpB JO41_04185 IPR018368 ClpA/B, conserved site 1 JO41_04185 IPR019489 Clp ATPase, C-terminal JO41_04185 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04185 IPR028299 ClpA/B, conserved site 2 JO41_04185 IPR036628 JO41_04185 JO41_04190 IPR001130 TatD family JO41_04190 IPR032466 JO41_04190 JO41_04200 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_04200 IPR006225 Pseudouridine synthase, RluC/RluD JO41_04200 IPR020103 Pseudouridine synthase, catalytic domain JO41_04210 IPR000620 Drug/metabolite transporter JO41_04215 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JO41_04215 IPR019479 Peroxiredoxin, C-terminal JO41_04215 IPR022915 Peroxiredoxin, TDXH subfamily, putative JO41_04215 IPR024706 Peroxiredoxin, AhpC-type JO41_04215 IPR036249 JO41_04215 JO41_04220 IPR002933 Peptidase M20 JO41_04220 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase JO41_04220 IPR011650 Peptidase M20, dimerisation domain JO41_04220 IPR036264 JO41_04220 JO41_04230 IPR001387 Cro/C1-type helix-turn-helix domain JO41_04230 IPR010982 Lambda repressor-like, DNA-binding domain JO41_04230 IPR013430 Toxin-antitoxin system, antidote protein, HigA JO41_04235 IPR007711 Plasmid maintenance system killer JO41_04235 IPR035093 JO41_04235 JO41_04260 IPR001661 Glycoside hydrolase, family 37 JO41_04260 IPR008928 Six-hairpin glycosidase-like JO41_04260 IPR012341 Six-hairpin glycosidase JO41_04265 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related JO41_04265 IPR006034 Asparaginase/glutaminase JO41_04265 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic JO41_04265 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JO41_04265 IPR018027 Asn/Gln amidotransferase JO41_04265 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JO41_04265 IPR027473 L-asparaginase, C-terminal domain JO41_04265 IPR027474 L-asparaginase, N-terminal JO41_04265 IPR027475 Asparaginase/glutaminase, active site 2 JO41_04265 IPR036152 JO41_04265 JO41_04265 IPR037152 JO41_04265 JO41_04275 IPR011989 Armadillo-like helical JO41_04275 IPR016024 Armadillo-type fold JO41_04275 IPR032682 JO41_04275 JO41_04285 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JO41_04285 IPR036754 JO41_04285 JO41_04295 IPR001478 PDZ domain JO41_04295 IPR004447 C-terminal-processing peptidase S41A JO41_04295 IPR005151 Tail specific protease JO41_04295 IPR029045 ClpP/crotonase-like domain JO41_04295 IPR036034 JO41_04295 JO41_04300 IPR006700 Ribosomal RNA small subunit methyltransferase E JO41_04300 IPR015947 PUA-like domain JO41_04300 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_04300 IPR029028 Alpha/beta knot methyltransferases JO41_04305 IPR004629 Glycosyl transferase WecB/TagA/CpsF JO41_04310 IPR002575 Aminoglycoside phosphotransferase JO41_04310 IPR009212 Methylthioribose kinase JO41_04310 IPR011009 Protein kinase-like domain JO41_04330 IPR002877 Ribosomal RNA methyltransferase FtsJ domain JO41_04330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_04350 IPR000456 Ribosomal protein L17 JO41_04350 IPR036373 JO41_04350 JO41_04355 IPR011260 RNA polymerase, alpha subunit, C-terminal JO41_04355 IPR011262 DNA-directed RNA polymerase, insert domain JO41_04355 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type JO41_04355 IPR011773 DNA-directed RNA polymerase, alpha subunit JO41_04355 IPR036603 JO41_04355 JO41_04355 IPR036643 JO41_04355 JO41_04360 IPR001971 Ribosomal protein S11 JO41_04360 IPR018102 Ribosomal S11, conserved site JO41_04360 IPR019981 Ribosomal protein S11, bacterial-type JO41_04360 IPR036967 JO41_04360 JO41_04365 IPR001892 Ribosomal protein S13 JO41_04365 IPR010979 Ribosomal protein S13-like, H2TH JO41_04365 IPR018269 Ribosomal protein S13, conserved site JO41_04365 IPR019980 Ribosomal protein S13, bacterial-type JO41_04365 IPR027437 30s ribosomal protein S13, C-terminal JO41_04370 IPR000473 Ribosomal protein L36 JO41_04370 IPR035977 JO41_04370 JO41_04375 IPR002208 SecY/SEC61-alpha family JO41_04375 IPR023201 SecY subunit domain JO41_04375 IPR026593 Protein translocase subunit SecY JO41_04380 IPR001196 Ribosomal protein L15, conserved site JO41_04380 IPR005749 Ribosomal protein L15, bacterial-type JO41_04380 IPR021131 Ribosomal protein L18e/L15P JO41_04380 IPR030878 JO41_04380 JO41_04380 IPR036227 JO41_04380 JO41_04385 IPR005996 Ribosomal protein L30, bacterial-type JO41_04385 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JO41_04385 IPR018038 Ribosomal protein L30, conserved site JO41_04385 IPR036919 JO41_04385 JO41_04390 IPR005324 Ribosomal protein S5, C-terminal JO41_04390 IPR005712 Ribosomal protein S5, bacterial-type JO41_04390 IPR013810 Ribosomal protein S5, N-terminal JO41_04390 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_04390 IPR018192 Ribosomal protein S5, N-terminal, conserved site JO41_04390 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_04395 IPR004389 Ribosomal protein L18, bacterial-type JO41_04395 IPR005484 Ribosomal protein L18/L5 JO41_04400 IPR000702 Ribosomal protein L6 JO41_04400 IPR002358 Ribosomal protein L6, conserved site JO41_04400 IPR019906 Ribosomal protein L6, bacterial-type JO41_04400 IPR020040 Ribosomal protein L6, alpha-beta domain JO41_04400 IPR036789 JO41_04400 JO41_04405 IPR000630 Ribosomal protein S8 JO41_04405 IPR035987 JO41_04405 JO41_04410 IPR002132 Ribosomal protein L5 JO41_04410 IPR020929 Ribosomal protein L5, conserved site JO41_04410 IPR020930 Ribosomal protein L5, bacterial-type JO41_04410 IPR022803 Ribosomal protein L5 domain JO41_04410 IPR031309 JO41_04410 JO41_04410 IPR031310 JO41_04410 JO41_04415 IPR003256 Ribosomal protein L24 JO41_04415 IPR005824 KOW JO41_04415 IPR005825 Ribosomal protein L24/L26, conserved site JO41_04415 IPR008991 Translation protein SH3-like domain JO41_04415 IPR014722 Ribosomal protein L2 domain 2 JO41_04420 IPR000218 Ribosomal protein L14b/L23e JO41_04420 IPR005745 Ribosomal protein L14, bacterial-type JO41_04420 IPR019972 Ribosomal protein L14 conserved site JO41_04420 IPR036853 JO41_04420 JO41_04425 IPR000266 Ribosomal protein S17 JO41_04425 IPR012340 Nucleic acid-binding, OB-fold JO41_04425 IPR019979 Ribosomal protein S17, conserved site JO41_04425 IPR019984 Ribosomal protein S17, bacterial-type JO41_04430 IPR001854 Ribosomal protein L29 JO41_04430 IPR036049 JO41_04430 JO41_04435 IPR000114 Ribosomal protein L16 JO41_04435 IPR016180 Ribosomal protein L10e/L16 JO41_04435 IPR020798 Ribosomal protein L16, conserved site JO41_04435 IPR036920 JO41_04435 JO41_04440 IPR001351 Ribosomal protein S3, C-terminal JO41_04440 IPR004044 K Homology domain, type 2 JO41_04440 IPR004087 K Homology domain JO41_04440 IPR005704 Ribosomal protein S3, bacterial JO41_04440 IPR009019 K homology domain, prokaryotic type JO41_04440 IPR015946 K homology domain-like, alpha/beta JO41_04440 IPR018280 Ribosomal protein S3, conserved site JO41_04440 IPR036419 JO41_04440 JO41_04445 IPR001063 Ribosomal protein L22/L17 JO41_04445 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type JO41_04445 IPR018260 Ribosomal protein L22/L17, conserved site JO41_04445 IPR036394 JO41_04445 JO41_04450 IPR002222 Ribosomal protein S19/S15 JO41_04450 IPR005732 Ribosomal protein S19, bacterial-type JO41_04450 IPR020934 Ribosomal protein S19 conserved site JO41_04450 IPR023575 Ribosomal protein S19, superfamily JO41_04455 IPR002171 Ribosomal protein L2 JO41_04455 IPR005880 Ribosomal protein L2, bacterial/organellar-type JO41_04455 IPR008991 Translation protein SH3-like domain JO41_04455 IPR012340 Nucleic acid-binding, OB-fold JO41_04455 IPR014722 Ribosomal protein L2 domain 2 JO41_04455 IPR014726 Ribosomal protein L2, domain 3 JO41_04455 IPR022666 Ribosomal Proteins L2, RNA binding domain JO41_04455 IPR022669 Ribosomal protein L2, C-terminal JO41_04460 IPR001014 Ribosomal protein L23/L25, conserved site JO41_04460 IPR012677 Nucleotide-binding, alpha-beta plait JO41_04460 IPR012678 Ribosomal protein L23/L15e core domain JO41_04460 IPR013025 Ribosomal protein L25/L23 JO41_04465 IPR002136 Ribosomal protein L4/L1e JO41_04465 IPR013005 Ribosomal protein L4/L1e, bacterial-type JO41_04465 IPR023574 Ribosomal protein L4 domain JO41_04470 IPR000597 Ribosomal protein L3 JO41_04470 IPR009000 Translation protein, beta-barrel domain JO41_04470 IPR019926 Ribosomal protein L3, conserved site JO41_04470 IPR019927 Ribosomal protein L3, bacterial/organelle-type JO41_04475 IPR001848 Ribosomal protein S10 JO41_04475 IPR018268 Ribosomal protein S10, conserved site JO41_04475 IPR027486 Ribosomal protein S10 domain JO41_04475 IPR036838 JO41_04475 JO41_04480 IPR000795 Elongation factor, GTP-binding domain JO41_04480 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JO41_04480 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JO41_04480 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JO41_04480 IPR005225 Small GTP-binding protein domain JO41_04480 IPR009000 Translation protein, beta-barrel domain JO41_04480 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JO41_04480 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04480 IPR031157 JO41_04480 JO41_04485 IPR037291 JO41_04485 JO41_04500 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic JO41_04500 IPR005146 B3/B4 tRNA-binding domain JO41_04500 IPR005147 tRNA synthetase, B5-domain JO41_04500 IPR009061 DNA binding domain, putative JO41_04500 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JO41_04500 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal JO41_04505 IPR010699 Protein of unknown function DUF1275 JO41_04510 IPR013126 Heat shock protein 70 family JO41_04510 IPR018392 LysM domain JO41_04510 IPR029047 Heat shock protein 70kD, peptide-binding domain JO41_04510 IPR036779 JO41_04510 JO41_04520 IPR003824 Undecaprenyl-diphosphatase UppP JO41_04525 IPR002543 FtsK domain JO41_04525 IPR003593 AAA+ ATPase domain JO41_04525 IPR018541 FtsK gamma domain JO41_04525 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04525 IPR036388 JO41_04525 JO41_04525 IPR036390 JO41_04525 JO41_04530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_04535 IPR011990 Tetratricopeptide-like helical domain JO41_04535 IPR019734 Tetratricopeptide repeat JO41_04540 IPR006027 NusB/RsmB/TIM44 JO41_04540 IPR011605 NusB antitermination factor JO41_04540 IPR035926 JO41_04540 JO41_04545 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JO41_04545 IPR027304 Trigger factor/SurA domain JO41_04555 IPR001130 TatD family JO41_04555 IPR018228 Deoxyribonuclease, TatD-related, conserved site JO41_04555 IPR032466 JO41_04555 JO41_04565 IPR007730 Sporulation-related domain JO41_04565 IPR009009 RlpA-like double-psi beta-barrel domain JO41_04565 IPR012997 Rare lipoprotein A, bacterial JO41_04565 IPR034718 JO41_04565 JO41_04565 IPR036680 JO41_04565 JO41_04565 IPR036908 JO41_04565 JO41_04580 IPR024471 Protein of unknown function DUF2715 JO41_04595 IPR002716 PIN domain JO41_04595 IPR029060 PIN domain-like JO41_04615 IPR003593 AAA+ ATPase domain JO41_04615 IPR011703 ATPase, AAA-3 JO41_04615 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04620 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis JO41_04620 IPR036105 JO41_04620 JO41_04630 IPR019016 CRISPR-associated DxTHG protein JO41_04655 IPR002035 von Willebrand factor, type A JO41_04655 IPR036465 JO41_04655 JO41_04660 IPR011335 Restriction endonuclease type II-like JO41_04660 IPR011604 Exonuclease, phage-type/RecB, C-terminal JO41_04660 IPR014017 DNA helicase, UvrD-like, C-terminal JO41_04660 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04660 IPR034739 JO41_04660 JO41_04660 IPR038726 JO41_04660 JO41_04665 IPR025420 Domain of unknown function DUF4143 JO41_04665 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04675 IPR001957 Chromosomal replication control, initiator DnaA JO41_04675 IPR003593 AAA+ ATPase domain JO41_04675 IPR010921 Trp repressor/replication initiator JO41_04675 IPR013159 Chromosomal replication initiator, DnaA C-terminal JO41_04675 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) JO41_04675 IPR018312 Chromosomal replication control, initiator DnaA, conserved site JO41_04675 IPR020591 Chromosomal replication control, initiator DnaA-like JO41_04675 IPR024633 DnaA N-terminal domain JO41_04675 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04675 IPR038454 JO41_04675 JO41_04680 IPR026045 Ferric binding protein JO41_04685 IPR003439 ABC transporter-like JO41_04685 IPR003593 AAA+ ATPase domain JO41_04685 IPR008995 Molybdate/tungstate binding, C-terminal JO41_04685 IPR013611 Transport-associated OB, type 2 JO41_04685 IPR017871 ABC transporter, conserved site JO41_04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04690 IPR000515 MetI-like domain JO41_04690 IPR035906 JO41_04690 JO41_04695 IPR003439 ABC transporter-like JO41_04695 IPR003593 AAA+ ATPase domain JO41_04695 IPR008995 Molybdate/tungstate binding, C-terminal JO41_04695 IPR017871 ABC transporter, conserved site JO41_04695 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04700 IPR025582 YARHG domain JO41_04700 IPR038434 JO41_04700 JO41_04705 IPR004839 Aminotransferase, class I/classII JO41_04705 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_04705 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_04705 IPR015424 Pyridoxal phosphate-dependent transferase JO41_04705 IPR027619 Putative C-S lyase JO41_04710 IPR000060 BCCT transporter family JO41_04715 IPR011009 Protein kinase-like domain JO41_04715 IPR017190 Bifunctional CTP:phosphocholine cytidylyltransferase/choline kinase JO41_04715 IPR025877 MobA-like NTP transferase domain JO41_04715 IPR029044 Nucleotide-diphospho-sugar transferases JO41_04720 IPR036259 JO41_04720 JO41_04730 IPR003385 Glycoside hydrolase, family 77 JO41_04730 IPR017853 Glycoside hydrolase, superfamily JO41_04740 IPR002068 Alpha crystallin/Hsp20 domain JO41_04740 IPR008978 HSP20-like chaperone JO41_04750 IPR000183 Ornithine/DAP/Arg decarboxylase JO41_04750 IPR002433 Ornithine decarboxylase JO41_04750 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JO41_04750 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal JO41_04750 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JO41_04750 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site JO41_04750 IPR029066 PLP-binding barrel JO41_04755 IPR001226 Flavodoxin, conserved site JO41_04755 IPR008254 Flavodoxin/nitric oxide synthase JO41_04755 IPR010087 Flavodoxin, short chain JO41_04755 IPR029039 Flavoprotein-like JO41_04760 IPR024523 Protein of unknown function DUF3793 JO41_04765 IPR000614 Free Met sulfoxide reductase conserved site JO41_04765 IPR003018 GAF domain JO41_04765 IPR029016 GAF domain-like JO41_04775 IPR013196 Helix-turn-helix, type 11 JO41_04775 IPR025831 ATP-dependent DNA helicase RecG C-terminal domain JO41_04775 IPR036388 JO41_04775 JO41_04775 IPR036390 JO41_04775 JO41_04775 IPR038475 JO41_04775 JO41_04780 IPR032317 JO41_04780 JO41_04785 IPR003439 ABC transporter-like JO41_04785 IPR003593 AAA+ ATPase domain JO41_04785 IPR017871 ABC transporter, conserved site JO41_04785 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04790 IPR003838 Permease FtsX-like JO41_04790 IPR025857 MacB-like periplasmic core domain JO41_04795 IPR003838 Permease FtsX-like JO41_04795 IPR025857 MacB-like periplasmic core domain JO41_04810 IPR006597 Sel1-like JO41_04810 IPR011990 Tetratricopeptide-like helical domain JO41_04810 IPR019734 Tetratricopeptide repeat JO41_04815 IPR011990 Tetratricopeptide-like helical domain JO41_04815 IPR019734 Tetratricopeptide repeat JO41_04820 IPR007560 Restriction endonuclease type IV, Mrr JO41_04820 IPR011335 Restriction endonuclease type II-like JO41_04820 IPR011990 Tetratricopeptide-like helical domain JO41_04820 IPR019734 Tetratricopeptide repeat JO41_04825 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JO41_04825 IPR029052 Metallo-dependent phosphatase-like JO41_04830 IPR000358 Ribonucleotide reductase small subunit JO41_04830 IPR009078 Ferritin-like superfamily JO41_04830 IPR012348 Ribonucleotide reductase-related JO41_04830 IPR030475 JO41_04830 JO41_04835 IPR002528 Multi antimicrobial extrusion protein JO41_04840 IPR003439 ABC transporter-like JO41_04840 IPR003593 AAA+ ATPase domain JO41_04840 IPR011527 ABC transporter type 1, transmembrane domain JO41_04840 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04840 IPR036640 JO41_04840 JO41_04845 IPR009614 Toxin YoeB JO41_04845 IPR035093 JO41_04845 JO41_04850 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_04850 IPR013321 Arc-type ribbon-helix-helix JO41_04855 IPR000182 GNAT domain JO41_04855 IPR016181 Acyl-CoA N-acyltransferase JO41_04860 IPR000182 GNAT domain JO41_04860 IPR016181 Acyl-CoA N-acyltransferase JO41_04865 IPR003959 ATPase, AAA-type, core JO41_04865 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04870 IPR025591 RloB-like protein JO41_04890 IPR005368 Uncharacterised protein family UPF0175 JO41_04900 IPR013196 Helix-turn-helix, type 11 JO41_04900 IPR026881 WYL domain JO41_04900 IPR028349 Protein PafB/PafC JO41_04900 IPR036388 JO41_04900 JO41_04900 IPR036390 JO41_04900 JO41_04905 IPR012550 Protein of unknown function DUF1706 JO41_04905 IPR034660 JO41_04905 JO41_04910 IPR003439 ABC transporter-like JO41_04910 IPR003593 AAA+ ATPase domain JO41_04910 IPR011527 ABC transporter type 1, transmembrane domain JO41_04910 IPR017871 ABC transporter, conserved site JO41_04910 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04910 IPR036640 JO41_04910 JO41_04915 IPR001920 Asp/Glu racemase JO41_04915 IPR004391 Glutamate racemase JO41_04915 IPR015942 Asp/Glu/hydantoin racemase JO41_04915 IPR018187 Asp/Glu racemase, active site JO41_04920 IPR004881 Ribosome biogenesis GTPase RsgA, putative JO41_04920 IPR010914 EngC GTPase JO41_04920 IPR012340 Nucleic acid-binding, OB-fold JO41_04920 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04925 IPR001647 DNA-binding HTH domain, TetR-type JO41_04925 IPR009057 Homeodomain-like JO41_04940 IPR003439 ABC transporter-like JO41_04940 IPR003593 AAA+ ATPase domain JO41_04940 IPR011527 ABC transporter type 1, transmembrane domain JO41_04940 IPR017871 ABC transporter, conserved site JO41_04940 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04940 IPR036640 JO41_04940 JO41_04945 IPR003439 ABC transporter-like JO41_04945 IPR003593 AAA+ ATPase domain JO41_04945 IPR011527 ABC transporter type 1, transmembrane domain JO41_04945 IPR017871 ABC transporter, conserved site JO41_04945 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04945 IPR036640 JO41_04945 JO41_04950 IPR003439 ABC transporter-like JO41_04950 IPR003593 AAA+ ATPase domain JO41_04950 IPR017871 ABC transporter, conserved site JO41_04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04955 IPR003339 ABC/ECF transporter, transmembrane component JO41_04960 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_04970 IPR003439 ABC transporter-like JO41_04970 IPR003593 AAA+ ATPase domain JO41_04970 IPR011527 ABC transporter type 1, transmembrane domain JO41_04970 IPR017871 ABC transporter, conserved site JO41_04970 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04970 IPR036640 JO41_04970 JO41_04975 IPR012547 Protein of unknown function DUF1703 JO41_04975 IPR018631 AAA-ATPase-like domain JO41_04975 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04990 IPR003961 Fibronectin, type III JO41_04990 IPR011460 Protein of unknown function DUF1566 JO41_04990 IPR013783 Immunoglobulin-like fold JO41_04990 IPR032527 JO41_04990 JO41_04990 IPR036116 JO41_04990 JO41_04995 IPR001757 Cation-transporting P-type ATPase JO41_04995 IPR008250 P-type ATPase, A domain JO41_04995 IPR018303 P-type ATPase, phosphorylation site JO41_04995 IPR023214 HAD-like domain JO41_04995 IPR023298 P-type ATPase, transmembrane domain JO41_04995 IPR023299 P-type ATPase, cytoplasmic domain N JO41_04995 IPR027256 Cation-transporting P-type ATPase, subfamily IB JO41_04995 IPR036412 JO41_04995 JO41_05005 IPR001845 HTH ArsR-type DNA-binding domain JO41_05005 IPR018334 ArsR-type transcription regulator, HTH motif JO41_05005 IPR036388 JO41_05005 JO41_05005 IPR036390 JO41_05005 JO41_05010 IPR010280 (Uracil-5)-methyltransferase family JO41_05010 IPR012340 Nucleic acid-binding, OB-fold JO41_05010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_05015 IPR002372 Pyrrolo-quinoline quinone repeat JO41_05015 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily JO41_05020 IPR007926 Borrelia P83100 JO41_05025 IPR003615 HNH nuclease JO41_05030 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_05030 IPR001041 2Fe-2S ferredoxin-type domain JO41_05030 IPR002888 [2Fe-2S]-binding JO41_05030 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site JO41_05030 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding JO41_05030 IPR012675 Beta-grasp domain JO41_05030 IPR017697 Selenium-dependent molybdenum hydroxylase 1 JO41_05030 IPR036010 JO41_05030 JO41_05030 IPR036856 JO41_05030 JO41_05030 IPR036884 JO41_05030 JO41_05030 IPR037165 JO41_05030 JO41_05035 IPR001404 Heat shock protein Hsp90 family JO41_05035 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_05035 IPR019805 Heat shock protein Hsp90, conserved site JO41_05035 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_05035 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 IPR036890 JO41_05035 JO41_05035 IPR037196 JO41_05035 JO41_05040 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 JO41_05040 IPR006073 GTP binding domain JO41_05040 IPR012675 Beta-grasp domain JO41_05040 IPR012676 TGS-like JO41_05040 IPR013029 Domain of unknown function DUF933 JO41_05040 IPR023192 TGS-like domain JO41_05040 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05045 IPR003029 Ribosomal protein S1, RNA-binding domain JO41_05045 IPR006641 YqgF/RNase H-like domain JO41_05045 IPR010994 RuvA domain 2-like JO41_05045 IPR012337 Ribonuclease H-like domain JO41_05045 IPR012340 Nucleic acid-binding, OB-fold JO41_05045 IPR018974 Tex-like protein, N-terminal JO41_05045 IPR022967 RNA-binding domain, S1 JO41_05045 IPR023319 Tex-like protein, HTH domain JO41_05045 IPR023323 Tex-like domain JO41_05045 IPR032639 JO41_05045 JO41_05045 IPR037027 JO41_05045 JO41_05050 IPR035093 JO41_05050 JO41_05055 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO41_05055 IPR036165 JO41_05055 JO41_05060 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JO41_05060 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial JO41_05060 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding JO41_05060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_05060 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JO41_05060 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 JO41_05065 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain JO41_05065 IPR002315 Glycyl-tRNA synthetase JO41_05065 IPR004154 Anticodon-binding JO41_05065 IPR022961 Glycine-tRNA ligase, bacterial JO41_05065 IPR036621 JO41_05065 JO41_05070 IPR000462 CDP-alcohol phosphatidyltransferase JO41_05075 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain JO41_05075 IPR030395 JO41_05075 JO41_05080 IPR003848 Domain of unknown function DUF218 JO41_05095 IPR007197 Radical SAM JO41_05100 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_05100 IPR035093 JO41_05100 JO41_05105 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO41_05105 IPR036165 JO41_05105 JO41_05110 IPR000631 YjeF C-terminal domain JO41_05110 IPR004443 YjeF N-terminal domain JO41_05110 IPR017953 Carbohydrate kinase, predicted, conserved site JO41_05110 IPR029056 Ribokinase-like JO41_05110 IPR030677 JO41_05110 JO41_05110 IPR036652 JO41_05110 JO41_05115 IPR006626 Parallel beta-helix repeat JO41_05115 IPR011050 Pectin lyase fold/virulence factor JO41_05115 IPR012332 P22 tailspike C-terminal domain-like JO41_05115 IPR012334 Pectin lyase fold JO41_05120 IPR000241 Putative RNA methylase domain JO41_05120 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_05120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_05125 IPR005524 Protein of unknown function DUF318, transmembrane JO41_05140 IPR000036 Peptidase A26, omptin JO41_05140 IPR020080 Outer membrane adhesin/peptidase omptin JO41_05145 IPR000394 RNA polymerase sigma factor 54 JO41_05145 IPR007046 RNA polymerase sigma factor 54, core-binding JO41_05145 IPR007634 RNA polymerase sigma factor 54, DNA-binding JO41_05145 IPR038709 JO41_05145 JO41_05170 IPR002035 von Willebrand factor, type A JO41_05170 IPR036465 JO41_05170 JO41_05175 IPR002035 von Willebrand factor, type A JO41_05175 IPR036465 JO41_05175 JO41_05180 IPR011990 Tetratricopeptide-like helical domain JO41_05185 IPR003646 SH3-like domain, bacterial-type JO41_05195 IPR007272 Sulphur transport domain JO41_05195 IPR026366 Putative selenium metabolism protein, YedE family JO41_05200 IPR001455 TusA-like domain JO41_05200 IPR036868 JO41_05200 JO41_05205 IPR021778 Protein of unknown function DUF3343 JO41_05210 IPR004536 Selenide water dikinase JO41_05210 IPR010918 AIR synthase-related protein, C-terminal domain JO41_05210 IPR036676 JO41_05210 JO41_05210 IPR036921 JO41_05210 JO41_05215 IPR038636 JO41_05215 JO41_05225 IPR001296 Glycosyl transferase, family 1 JO41_05225 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JO41_05230 IPR003439 ABC transporter-like JO41_05230 IPR003593 AAA+ ATPase domain JO41_05230 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05230 IPR032781 JO41_05230 JO41_05245 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family JO41_05245 IPR029069 HotDog domain JO41_05250 IPR003660 HAMP linker domain JO41_05250 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_05250 IPR004090 Chemotaxis methyl-accepting receptor JO41_05250 IPR029151 Periplasmic sensor domain-like JO41_05250 IPR033479 JO41_05250 JO41_05255 IPR001763 Rhodanese-like domain JO41_05255 IPR036873 JO41_05255 JO41_05260 IPR000994 Peptidase M24, structural domain JO41_05260 IPR001714 Peptidase M24, methionine aminopeptidase JO41_05260 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 JO41_05260 IPR036005 JO41_05260 JO41_05265 IPR001623 DnaJ domain JO41_05265 IPR036869 JO41_05265 JO41_05275 IPR002563 Flavin reductase-like, FMN-binding JO41_05275 IPR012349 FMN-binding split barrel JO41_05280 IPR007163 Protein of unknown function DUF368 JO41_05285 IPR000160 GGDEF domain JO41_05285 IPR000595 Cyclic nucleotide-binding domain JO41_05285 IPR014710 RmlC-like jelly roll fold JO41_05285 IPR018488 Cyclic nucleotide-binding, conserved site JO41_05285 IPR018490 Cyclic nucleotide-binding-like JO41_05285 IPR029787 Nucleotide cyclase JO41_05290 IPR000160 GGDEF domain JO41_05290 IPR000595 Cyclic nucleotide-binding domain JO41_05290 IPR014710 RmlC-like jelly roll fold JO41_05290 IPR018490 Cyclic nucleotide-binding-like JO41_05290 IPR029787 Nucleotide cyclase JO41_05295 IPR018461 Na+/H+ antiporter, NhaC-like JO41_05310 IPR019043 Restriction endonuclease, type II, HindIII JO41_05310 IPR038373 JO41_05310 JO41_05315 IPR001091 Restriction/modification DNA-methylase JO41_05315 IPR002941 DNA methylase N-4/N-6 JO41_05315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_05325 IPR000182 GNAT domain JO41_05325 IPR016181 Acyl-CoA N-acyltransferase JO41_05360 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_05365 IPR002716 PIN domain JO41_05365 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_05365 IPR029060 PIN domain-like JO41_05385 IPR003010 Carbon-nitrogen hydrolase JO41_05385 IPR036526 JO41_05385 JO41_05405 IPR036869 JO41_05405 JO41_05410 IPR013132 N-acetylneuraminic acid synthase, N-terminal JO41_05410 IPR013785 Aldolase-type TIM barrel JO41_05410 IPR036732 JO41_05410 JO41_05415 IPR001001 DNA polymerase III, beta chain JO41_05415 IPR022634 DNA polymerase III, beta chain, N-terminal JO41_05415 IPR022635 DNA polymerase III, beta chain, C-terminal JO41_05415 IPR022637 DNA polymerase III, beta chain, central JO41_05425 IPR007922 Protein of unknown function DUF721/UPF0232 JO41_05440 IPR001059 Translation elongation factor P/YeiP, central JO41_05440 IPR008991 Translation protein SH3-like domain JO41_05440 IPR011768 Translation elongation factor P JO41_05440 IPR012340 Nucleic acid-binding, OB-fold JO41_05440 IPR013185 Translation elongation factor, KOW-like JO41_05440 IPR014722 Ribosomal protein L2 domain 2 JO41_05440 IPR015365 Elongation factor P, C-terminal JO41_05440 IPR020599 Translation elongation factor P/YeiP JO41_05450 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal JO41_05450 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain JO41_05450 IPR036944 JO41_05450 JO41_05455 IPR000462 CDP-alcohol phosphatidyltransferase JO41_05455 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase JO41_05465 IPR007197 Radical SAM JO41_05465 IPR031012 JO41_05465 JO41_05470 IPR000055 Restriction endonuclease, type I, HsdS JO41_05485 IPR003356 DNA methylase, adenine-specific JO41_05485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_05485 IPR029464 Type I restriction enzyme R protein, N-terminal domain JO41_05485 IPR038333 JO41_05485 JO41_05490 IPR000845 Nucleoside phosphorylase domain JO41_05490 IPR018016 Nucleoside phosphorylase, conserved site JO41_05490 IPR035994 JO41_05490 JO41_05495 IPR011055 Duplicated hybrid motif JO41_05495 IPR016047 Peptidase M23 JO41_05495 IPR018392 LysM domain JO41_05495 IPR036779 JO41_05495 JO41_05500 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JO41_05500 IPR012338 Beta-lactamase/transpeptidase-like JO41_05500 IPR015956 Penicillin-binding protein-associated JO41_05500 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JO41_05505 IPR002792 TRAM domain JO41_05505 IPR005839 Methylthiotransferase JO41_05505 IPR006638 Elongator protein 3/MiaB/NifB JO41_05505 IPR007197 Radical SAM JO41_05505 IPR013848 Methylthiotransferase, N-terminal JO41_05505 IPR020612 Methylthiotransferase, conserved site JO41_05505 IPR023404 Radical SAM, alpha/beta horseshoe JO41_05505 IPR038135 JO41_05505 JO41_05515 IPR007730 Sporulation-related domain JO41_05515 IPR011990 Tetratricopeptide-like helical domain JO41_05515 IPR036680 JO41_05515 JO41_05520 IPR001466 Beta-lactamase-related JO41_05520 IPR012338 Beta-lactamase/transpeptidase-like JO41_05525 IPR001279 Beta-lactamase-like JO41_05525 IPR036866 JO41_05525 JO41_05530 IPR019016 CRISPR-associated DxTHG protein JO41_05545 IPR011335 Restriction endonuclease type II-like JO41_05545 IPR011856 tRNA endonuclease-like domain JO41_05545 IPR015093 Protein of unknown function DUF1887 JO41_05550 IPR036465 JO41_05550 JO41_05555 IPR001932 Protein phosphatase 2C (PP2C)-like domain JO41_05555 IPR036457 JO41_05555 JO41_05560 IPR000719 Protein kinase domain JO41_05560 IPR011009 Protein kinase-like domain JO41_05565 IPR003593 AAA+ ATPase domain JO41_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05585 IPR018633 Domain of unknown function DUF2357 JO41_05595 IPR001911 Ribosomal protein S21 JO41_05595 IPR018278 Ribosomal protein S21, conserved site JO41_05595 IPR038380 JO41_05595 JO41_05600 IPR002123 Phospholipid/glycerol acyltransferase JO41_05605 IPR006439 HAD hydrolase, subfamily IA JO41_05605 IPR023214 HAD-like domain JO41_05605 IPR036412 JO41_05605 JO41_05620 IPR029144 Threonine synthase, N-terminal JO41_05620 IPR036052 JO41_05620 JO41_05620 IPR037158 JO41_05620 JO41_05640 IPR005146 B3/B4 tRNA-binding domain JO41_05645 IPR011701 Major facilitator superfamily JO41_05645 IPR011989 Armadillo-like helical JO41_05645 IPR016024 Armadillo-type fold JO41_05645 IPR036259 JO41_05645 JO41_05650 IPR001567 Peptidase M3A/M3B JO41_05650 IPR004438 Peptidase M3B, oligoendopeptidase F JO41_05650 IPR013647 Oligopeptidase F, N-terminal domain JO41_05655 IPR007484 Peptidase M28 JO41_05660 IPR008651 Uncharacterised protein family HicB JO41_05660 IPR010985 Ribbon-helix-helix JO41_05660 IPR035069 JO41_05660 JO41_05665 IPR012933 HicA mRNA interferase family JO41_05670 IPR003812 Fido domain JO41_05670 IPR036597 JO41_05670 JO41_05675 IPR002078 RNA polymerase sigma factor 54 interaction domain JO41_05675 IPR003593 AAA+ ATPase domain JO41_05675 IPR011006 CheY-like superfamily JO41_05675 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO41_05675 IPR025944 Sigma-54 interaction domain, conserved site JO41_05675 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05685 IPR002347 Glucose/ribitol dehydrogenase JO41_05685 IPR036291 JO41_05685 JO41_05690 IPR002645 STAS domain JO41_05690 IPR003658 Anti-sigma factor antagonist JO41_05690 IPR036513 JO41_05690 JO41_05695 IPR001093 IMP dehydrogenase/GMP reductase JO41_05695 IPR005990 Inosine-5'-monophosphate dehydrogenase JO41_05695 IPR013785 Aldolase-type TIM barrel JO41_05695 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JO41_05700 IPR000023 Phosphofructokinase domain JO41_05700 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108 JO41_05700 IPR022953 Phosphofructokinase JO41_05700 IPR035966 JO41_05700 JO41_05705 IPR035196 JO41_05705 JO41_05710 IPR003439 ABC transporter-like JO41_05710 IPR003593 AAA+ ATPase domain JO41_05710 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit JO41_05710 IPR008995 Molybdate/tungstate binding, C-terminal JO41_05710 IPR013611 Transport-associated OB, type 2 JO41_05710 IPR017871 ABC transporter, conserved site JO41_05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05715 IPR000515 MetI-like domain JO41_05715 IPR035906 JO41_05715 JO41_05720 IPR000515 MetI-like domain JO41_05720 IPR035906 JO41_05720 JO41_05730 IPR000979 Phosphodiesterase MJ0936/Vps29 JO41_05730 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type JO41_05730 IPR029052 Metallo-dependent phosphatase-like JO41_05735 IPR001891 Malic oxidoreductase JO41_05735 IPR012301 Malic enzyme, N-terminal domain JO41_05735 IPR012302 Malic enzyme, NAD-binding JO41_05735 IPR015884 Malic enzyme, conserved site JO41_05735 IPR036291 JO41_05735 JO41_05735 IPR037062 JO41_05735 JO41_05740 IPR003352 Phosphotransferase system, EIIC JO41_05750 IPR003439 ABC transporter-like JO41_05750 IPR003593 AAA+ ATPase domain JO41_05750 IPR017871 ABC transporter, conserved site JO41_05750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05755 IPR000522 ABC transporter, permease protein JO41_05755 IPR037294 JO41_05755 JO41_05760 IPR002491 ABC transporter periplasmic binding domain JO41_05765 IPR026816 Flavodoxin domain JO41_05765 IPR029039 Flavoprotein-like JO41_05770 IPR007421 ATPase, AAA-4 JO41_05770 IPR038461 JO41_05770 JO41_05770 IPR038475 JO41_05770 JO41_05780 IPR002504 Inorganic polyphosphate/ATP-NAD kinase JO41_05780 IPR016064 ATP-NAD kinase-like domain JO41_05780 IPR017437 ATP-NAD kinase, PpnK-type, all-beta JO41_05780 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 JO41_05785 IPR001107 Band 7 protein JO41_05785 IPR036013 JO41_05785 JO41_05795 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site JO41_05795 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type JO41_05795 IPR004839 Aminotransferase, class I/classII JO41_05795 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type JO41_05795 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_05795 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_05795 IPR015424 Pyridoxal phosphate-dependent transferase JO41_05800 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JO41_05800 IPR036291 JO41_05800 JO41_05805 IPR003744 Protein of unknown function DUF165 JO41_05810 IPR001980 Coenzyme A biosynthesis protein JO41_05810 IPR004821 Cytidyltransferase-like domain JO41_05810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_05820 IPR000559 Formate-tetrahydrofolate ligase, FTHFS JO41_05820 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site JO41_05820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05825 IPR004685 Branched-chain amino acid transport system II carrier protein JO41_05830 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_05830 IPR004090 Chemotaxis methyl-accepting receptor JO41_05835 IPR011055 Duplicated hybrid motif JO41_05835 IPR016047 Peptidase M23 JO41_05835 IPR018392 LysM domain JO41_05835 IPR036779 JO41_05835 JO41_05840 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JO41_05840 IPR022038 Bacterial Ig-like domain JO41_05840 IPR025965 FlgD Ig-like domain JO41_05840 IPR036737 JO41_05840 JO41_05845 IPR001977 Dephospho-CoA kinase JO41_05845 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05850 IPR007730 Sporulation-related domain JO41_05850 IPR036680 JO41_05850 JO41_05865 IPR000836 Phosphoribosyltransferase domain JO41_05865 IPR005946 Ribose-phosphate diphosphokinase JO41_05865 IPR029057 Phosphoribosyltransferase-like JO41_05865 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain JO41_05870 IPR010364 Uncharacterised protein family, inner membrane CreD JO41_05880 IPR018485 Carbohydrate kinase, FGGY, C-terminal JO41_05885 IPR009164 Fructose-1,6-bisphosphatase class 3 JO41_05885 IPR029052 Metallo-dependent phosphatase-like JO41_05890 IPR003385 Glycoside hydrolase, family 77 JO41_05890 IPR017853 Glycoside hydrolase, superfamily JO41_05895 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JO41_05895 IPR005886 UDP-glucose 4-epimerase GalE JO41_05895 IPR036291 JO41_05895 JO41_05905 IPR002178 PTS EIIA type-2 domain JO41_05905 IPR016152 Phosphotransferase/anion transporter JO41_05940 IPR011990 Tetratricopeptide-like helical domain JO41_05940 IPR019734 Tetratricopeptide repeat JO41_05955 IPR025164 Domain of unknown function DUF4097 JO41_05965 IPR007168 Phage shock protein, PspC, N-terminal JO41_05970 IPR012963 Protein of unknown function DUF1700 JO41_05975 IPR005149 Transcription regulator PadR N-terminal JO41_05975 IPR036388 JO41_05975 JO41_05975 IPR036390 JO41_05975 JO41_05980 IPR003961 Fibronectin, type III JO41_05980 IPR013320 Concanavalin A-like lectin/glucanase, subgroup JO41_05980 IPR013783 Immunoglobulin-like fold JO41_05980 IPR036116 JO41_05980 JO41_05985 IPR011990 Tetratricopeptide-like helical domain JO41_05985 IPR019734 Tetratricopeptide repeat JO41_05990 IPR002915 DeoC/FbaB/ lacD aldolase JO41_05990 IPR011343 Deoxyribose-phosphate aldolase JO41_05990 IPR013785 Aldolase-type TIM barrel JO41_05990 IPR028581 Deoxyribose-phosphate aldolase type I JO41_05995 IPR001365 Adenosine/AMP deaminase domain JO41_05995 IPR032466 JO41_05995 JO41_06000 IPR002218 Glucose-inhibited division protein A-related JO41_06000 IPR004416 Glucose-inhibited division protein A JO41_06000 IPR020595 Glucose-inhibited division protein A-related, conserved site JO41_06000 IPR026904 GidA associated domain 3 JO41_06000 IPR036188 JO41_06000 JO41_06005 IPR025540 Fluoroacetyl-CoA thioesterase JO41_06005 IPR029069 HotDog domain JO41_06010 IPR003593 AAA+ ATPase domain JO41_06010 IPR004605 DNA helicase, Holliday junction RuvB type JO41_06010 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal JO41_06010 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal JO41_06010 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06010 IPR036388 JO41_06010 JO41_06010 IPR036390 JO41_06010 JO41_06015 IPR003660 HAMP linker domain JO41_06015 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_06015 IPR004090 Chemotaxis methyl-accepting receptor JO41_06015 IPR029151 Periplasmic sensor domain-like JO41_06015 IPR033479 JO41_06015 JO41_06020 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal JO41_06030 IPR001539 Peptidase U32 JO41_06040 IPR014825 DNA alkylation repair enzyme JO41_06040 IPR016024 Armadillo-type fold JO41_06045 IPR002816 Pheromone shutdown, TraB JO41_06045 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal JO41_06050 IPR011990 Tetratricopeptide-like helical domain JO41_06050 IPR019734 Tetratricopeptide repeat JO41_06060 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06065 IPR000640 Translation elongation factor EFG, V domain JO41_06065 IPR000795 Elongation factor, GTP-binding domain JO41_06065 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JO41_06065 IPR004540 Translation elongation factor EFG/EF2 JO41_06065 IPR005225 Small GTP-binding protein domain JO41_06065 IPR005517 Translation elongation factor EFG/EF2, domain IV JO41_06065 IPR009000 Translation protein, beta-barrel domain JO41_06065 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_06065 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_06065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06065 IPR031157 JO41_06065 JO41_06065 IPR035647 JO41_06065 JO41_06070 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal JO41_06070 IPR034904 JO41_06070 JO41_06075 IPR013783 Immunoglobulin-like fold JO41_06075 IPR014756 Immunoglobulin E-set JO41_06075 IPR022038 Bacterial Ig-like domain JO41_06080 IPR015324 Ribosomal protein Rsm22, bacterial-type JO41_06080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_06085 IPR005841 Alpha-D-phosphohexomutase superfamily JO41_06085 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JO41_06085 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JO41_06085 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JO41_06085 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JO41_06090 IPR011055 Duplicated hybrid motif JO41_06090 IPR016047 Peptidase M23 JO41_06100 IPR003477 mRNA interferase PemK-like protein JO41_06100 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JO41_06115 IPR029058 Alpha/Beta hydrolase fold JO41_06120 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase JO41_06125 IPR001126 DNA-repair protein, UmuC-like JO41_06125 IPR017961 DNA polymerase, Y-family, little finger domain JO41_06125 IPR022880 DNA polymerase IV JO41_06125 IPR036775 JO41_06125 JO41_06140 IPR002716 PIN domain JO41_06140 IPR029060 PIN domain-like JO41_06145 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_06145 IPR013321 Arc-type ribbon-helix-helix JO41_06150 IPR000055 Restriction endonuclease, type I, HsdS JO41_06160 IPR002104 Integrase, catalytic JO41_06160 IPR004107 Integrase, SAM-like, N-terminal JO41_06160 IPR010998 Integrase, Lambda-type, N-terminal JO41_06160 IPR011010 DNA breaking-rejoining enzyme, catalytic core JO41_06160 IPR013762 Integrase-like, catalytic core JO41_06165 IPR025528 Protein of unknown function DUF4415 JO41_06170 IPR007460 Burkholderia phage Bups phi1, Orf7.3 JO41_06170 IPR038573 JO41_06170 JO41_06175 IPR000055 Restriction endonuclease, type I, HsdS JO41_06185 IPR003356 DNA methylase, adenine-specific JO41_06185 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JO41_06185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_06185 IPR038333 JO41_06185 JO41_06190 IPR003660 HAMP linker domain JO41_06190 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_06190 IPR029151 Periplasmic sensor domain-like JO41_06190 IPR033479 JO41_06190 JO41_06195 IPR005322 Peptidase C69, dipeptidase A JO41_06200 IPR003660 HAMP linker domain JO41_06200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_06200 IPR004090 Chemotaxis methyl-accepting receptor JO41_06200 IPR029151 Periplasmic sensor domain-like JO41_06200 IPR033479 JO41_06200 JO41_06205 IPR025234 Protein of unknown function DUF4177 JO41_06210 IPR003660 HAMP linker domain JO41_06210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_06210 IPR004090 Chemotaxis methyl-accepting receptor JO41_06210 IPR029151 Periplasmic sensor domain-like JO41_06210 IPR033479 JO41_06210 JO41_06215 IPR012507 YibE/F-like JO41_06220 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JO41_06220 IPR006146 5'-Nucleotidase, conserved site JO41_06220 IPR006179 5'-Nucleotidase/apyrase JO41_06220 IPR008334 5'-Nucleotidase, C-terminal JO41_06220 IPR029052 Metallo-dependent phosphatase-like JO41_06220 IPR036907 JO41_06220 JO41_06225 IPR004316 JO41_06225 JO41_06230 IPR006037 Regulator of K+ conductance, C-terminal JO41_06230 IPR006153 Cation/H+ exchanger JO41_06230 IPR036721 JO41_06230 JO41_06230 IPR038770 JO41_06230 JO41_06235 IPR011990 Tetratricopeptide-like helical domain JO41_06240 IPR013559 YheO-like JO41_06240 IPR039445 JO41_06240 JO41_06245 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase JO41_06245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_06245 IPR035107 JO41_06245 JO41_06250 IPR012545 Protein of unknown function DUF1697 JO41_06260 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase JO41_06260 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JO41_06260 IPR029056 Ribokinase-like JO41_06265 IPR000053 Pyrimidine-nucleoside phosphorylase JO41_06265 IPR000312 Glycosyl transferase, family 3 JO41_06265 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal JO41_06265 IPR017459 Glycosyl transferase family 3, N-terminal domain JO41_06265 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site JO41_06265 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic JO41_06265 IPR035902 JO41_06265 JO41_06265 IPR036320 JO41_06265 JO41_06265 IPR036566 JO41_06265 JO41_06270 IPR001667 DDH domain JO41_06270 IPR003156 DHHA1 domain JO41_06270 IPR004610 Bacterial RecJ exonuclease JO41_06270 IPR038763 JO41_06270 JO41_06285 IPR001789 Signal transduction response regulator, receiver domain JO41_06285 IPR001867 Signal transduction response regulator, C-terminal JO41_06285 IPR011006 CheY-like superfamily JO41_06285 IPR036388 JO41_06285 JO41_06290 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_06290 IPR003660 HAMP linker domain JO41_06290 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JO41_06290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JO41_06290 IPR036097 JO41_06290 JO41_06290 IPR036890 JO41_06290 JO41_06300 IPR001478 PDZ domain JO41_06300 IPR001940 Peptidase S1C JO41_06300 IPR009003 Trypsin-like cysteine/serine peptidase domain JO41_06300 IPR011782 Peptidase S1C, Do JO41_06300 IPR036034 JO41_06300 JO41_06305 IPR003439 ABC transporter-like JO41_06305 IPR003593 AAA+ ATPase domain JO41_06305 IPR017871 ABC transporter, conserved site JO41_06305 IPR018449 NIL domain JO41_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06310 IPR000515 MetI-like domain JO41_06310 IPR035906 JO41_06310 JO41_06315 IPR002915 DeoC/FbaB/ lacD aldolase JO41_06315 IPR013785 Aldolase-type TIM barrel JO41_06320 IPR025997 Periplasmic binding protein domain JO41_06320 IPR028082 Periplasmic binding protein-like I JO41_06325 IPR001851 ABC transporter, permease JO41_06330 IPR001851 ABC transporter, permease JO41_06335 IPR003439 ABC transporter-like JO41_06335 IPR003593 AAA+ ATPase domain JO41_06335 IPR017871 ABC transporter, conserved site JO41_06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06340 IPR007324 Sugar-binding domain, putative JO41_06340 IPR007630 RNA polymerase sigma-70 region 4 JO41_06340 IPR036388 JO41_06340 JO41_06340 IPR037171 JO41_06340 JO41_06345 IPR000577 JO41_06345 JO41_06345 IPR018484 Carbohydrate kinase, FGGY, N-terminal JO41_06345 IPR018485 Carbohydrate kinase, FGGY, C-terminal JO41_06350 IPR011051 RmlC-like cupin domain JO41_06350 IPR013096 Cupin 2, conserved barrel JO41_06350 IPR014710 RmlC-like jelly roll fold JO41_06355 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_06360 IPR000515 MetI-like domain JO41_06360 IPR035906 JO41_06360 JO41_06365 IPR000515 MetI-like domain JO41_06365 IPR035906 JO41_06365 JO41_06370 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site JO41_06370 IPR001650 Helicase, C-terminal JO41_06370 IPR005580 DbpA, RNA-binding JO41_06370 IPR011545 DEAD/DEAH box helicase domain JO41_06370 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06380 IPR000649 Initiation factor 2B-related JO41_06380 IPR011559 Initiation factor 2B alpha/beta/delta JO41_06380 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain JO41_06380 IPR037171 JO41_06380 JO41_06385 IPR021243 Protein of unknown function DUF2804 JO41_06390 IPR007235 Glycosyl transferase, family 28, C-terminal JO41_06390 IPR009695 Diacylglycerol glucosyltransferase, N-terminal JO41_06425 IPR006842 Transposase (putative), YhgA-like JO41_06430 IPR001236 Lactate/malate dehydrogenase, N-terminal JO41_06430 IPR001557 L-lactate/malate dehydrogenase JO41_06430 IPR011304 L-lactate dehydrogenase JO41_06430 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JO41_06430 IPR018177 L-lactate dehydrogenase, active site JO41_06430 IPR022383 Lactate/malate dehydrogenase, C-terminal JO41_06430 IPR036291 JO41_06430 JO41_06435 IPR001891 Malic oxidoreductase JO41_06435 IPR012301 Malic enzyme, N-terminal domain JO41_06435 IPR012302 Malic enzyme, NAD-binding JO41_06435 IPR036291 JO41_06435 JO41_06435 IPR037062 JO41_06435 JO41_06440 IPR024471 Protein of unknown function DUF2715 JO41_06445 IPR000424 Primosome PriB/single-strand DNA-binding JO41_06445 IPR011344 Single-stranded DNA-binding protein JO41_06445 IPR012340 Nucleic acid-binding, OB-fold JO41_06490 IPR002133 S-adenosylmethionine synthetase JO41_06490 IPR022628 S-adenosylmethionine synthetase, N-terminal JO41_06490 IPR022629 S-adenosylmethionine synthetase, central domain JO41_06490 IPR022630 S-adenosylmethionine synthetase, C-terminal JO41_06490 IPR022631 S-adenosylmethionine synthetase, conserved site JO41_06490 IPR022636 S-adenosylmethionine synthetase superfamily JO41_06500 IPR002625 Smr protein/MutS2 C-terminal JO41_06500 IPR036063 JO41_06500 JO41_06505 IPR010619 Domain of unknown function DUF1212 JO41_06510 IPR024528 Domain of unknown function DUF3815 JO41_06515 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta JO41_06515 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta JO41_06520 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family JO41_06525 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family JO41_06530 IPR003141 Polymerase/histidinol phosphatase, N-terminal JO41_06530 IPR004013 PHP, C-terminal JO41_06530 IPR016195 Polymerase/histidinol phosphatase-like JO41_06535 IPR000595 Cyclic nucleotide-binding domain JO41_06535 IPR011990 Tetratricopeptide-like helical domain JO41_06535 IPR014710 RmlC-like jelly roll fold JO41_06535 IPR018490 Cyclic nucleotide-binding-like JO41_06535 IPR019734 Tetratricopeptide repeat JO41_06540 IPR000595 Cyclic nucleotide-binding domain JO41_06540 IPR014710 RmlC-like jelly roll fold JO41_06540 IPR018488 Cyclic nucleotide-binding, conserved site JO41_06540 IPR018490 Cyclic nucleotide-binding-like JO41_06540 IPR036388 JO41_06540 JO41_06540 IPR036390 JO41_06540 JO41_06545 IPR001650 Helicase, C-terminal JO41_06545 IPR003711 CarD-like/TRCF domain JO41_06545 IPR004576 Transcription-repair coupling factor JO41_06545 IPR005118 Transcription-repair-coupling factor, C-terminal domain JO41_06545 IPR011545 DEAD/DEAH box helicase domain JO41_06545 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_06545 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06545 IPR036101 JO41_06545 JO41_06545 IPR037235 JO41_06545 JO41_06575 IPR029322 Domain of unknown function DUF4474 JO41_06580 IPR031344 JO41_06580 JO41_06710 IPR001095 Acetyl-CoA carboxylase, alpha subunit JO41_06710 IPR029045 ClpP/crotonase-like domain JO41_06715 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit JO41_06715 IPR029045 ClpP/crotonase-like domain JO41_06715 IPR034733 JO41_06715 JO41_06720 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JO41_06720 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal JO41_06720 IPR005482 Biotin carboxylase, C-terminal JO41_06720 IPR011054 Rudiment single hybrid motif JO41_06720 IPR016185 Pre-ATP-grasp domain JO41_06725 IPR000089 Biotin/lipoyl attachment JO41_06725 IPR001249 Acetyl-CoA biotin carboxyl carrier JO41_06725 IPR011053 Single hybrid motif JO41_06730 IPR010758 Trans-2-enoyl-CoA reductase JO41_06730 IPR024906 Enoyl reductase FAD binding domain JO41_06730 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative JO41_06735 IPR009051 Alpha-helical ferredoxin JO41_06735 IPR010208 Electron transport complex protein RnfC JO41_06735 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit JO41_06735 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_06735 IPR026902 RnfC Barrel sandwich hybrid domain JO41_06735 IPR037225 JO41_06735 JO41_06740 IPR004338 NADH-quinone reductase NQR2/RnfD JO41_06740 IPR011303 Electron transport complex, RnfD JO41_06745 IPR007329 FMN-binding JO41_06750 IPR003667 Electron transport complex, Rnf/Nqr JO41_06750 IPR010968 Electron transport complex, RnfE JO41_06755 IPR003667 Electron transport complex, Rnf/Nqr JO41_06755 IPR011293 Electron transport complex, RnfA JO41_06760 IPR007202 4Fe-4S domain JO41_06760 IPR010207 Electron transport complex, RnfB JO41_06760 IPR011005 Dihydropteroate synthase-like JO41_06760 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_06760 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_06765 IPR004044 K Homology domain, type 2 JO41_06765 IPR005225 Small GTP-binding protein domain JO41_06765 IPR005662 GTP-binding protein Era JO41_06765 IPR006073 GTP binding domain JO41_06765 IPR009019 K homology domain, prokaryotic type JO41_06765 IPR015946 K homology domain-like, alpha/beta JO41_06765 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06770 IPR001626 ABC-3 JO41_06770 IPR037294 JO41_06770 JO41_06775 IPR002082 Aspartate carbamoyltransferase JO41_06775 IPR006130 Aspartate/ornithine carbamoyltransferase JO41_06775 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JO41_06775 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JO41_06775 IPR017702 Putative carbamoyltransferase YgeW JO41_06775 IPR036901 JO41_06775 JO41_06780 IPR002933 Peptidase M20 JO41_06780 IPR011650 Peptidase M20, dimerisation domain JO41_06780 IPR017706 Peptidase M20/DapE, YgeY JO41_06780 IPR036264 JO41_06780 JO41_06785 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_06785 IPR003356 DNA methylase, adenine-specific JO41_06785 IPR004546 Restriction endonuclease, type I, HsdM JO41_06785 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JO41_06785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_06785 IPR038333 JO41_06785 JO41_06790 IPR011204 Virulence protein RhuM-like JO41_06795 IPR000055 Restriction endonuclease, type I, HsdS JO41_06800 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 JO41_06800 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06805 IPR004473 Restriction endonuclease, type I, HsdR JO41_06805 IPR006935 Helicase/UvrB domain JO41_06805 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal JO41_06805 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_06805 IPR022625 Type I restriction and modification enzyme, subunit R, C-terminal JO41_06805 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06815 IPR007621 TPM domain JO41_06820 IPR003783 Regulatory protein RecX JO41_06820 IPR036388 JO41_06820 JO41_06825 IPR000754 Ribosomal protein S9 JO41_06825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_06825 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_06825 IPR020574 Ribosomal protein S9, conserved site JO41_06825 IPR023035 Ribosomal protein S9, bacterial/plastid JO41_06830 IPR005822 Ribosomal protein L13 JO41_06830 IPR005823 Ribosomal protein L13, bacterial-type JO41_06830 IPR023563 Ribosomal protein L13, conserved site JO41_06830 IPR036899 JO41_06830 JO41_06845 IPR000185 Protein translocase subunit SecA JO41_06845 IPR001650 Helicase, C-terminal JO41_06845 IPR004027 SEC-C motif JO41_06845 IPR011115 SecA DEAD-like, N-terminal JO41_06845 IPR011116 SecA Wing/Scaffold JO41_06845 IPR011130 SecA preprotein, cross-linking domain JO41_06845 IPR020937 SecA conserved site JO41_06845 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06845 IPR036266 JO41_06845 JO41_06845 IPR036670 JO41_06845 JO41_06865 IPR007159 AbrB-like domain JO41_06865 IPR037914 JO41_06865 JO41_06870 IPR002716 PIN domain JO41_06870 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_06870 IPR029060 PIN domain-like JO41_06895 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO41_06895 IPR036165 JO41_06895 JO41_06900 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_06900 IPR035093 JO41_06900 JO41_06910 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family JO41_06910 IPR004785 Ribose 5-phosphate isomerase B JO41_06910 IPR036569 JO41_06910 JO41_06915 IPR013830 JO41_06915 JO41_06925 IPR002577 Helix-turn-helix, HxlR type JO41_06925 IPR036388 JO41_06925 JO41_06925 IPR036390 JO41_06925 JO41_06930 IPR032710 JO41_06930 JO41_06930 IPR037401 JO41_06930 JO41_06970 IPR003761 Exonuclease VII, small subunit JO41_06970 IPR037004 JO41_06970 JO41_06975 IPR002099 DNA mismatch repair protein family JO41_06975 IPR013507 DNA mismatch repair protein, C-terminal JO41_06975 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_06975 IPR014762 DNA mismatch repair, conserved site JO41_06975 IPR014790 MutL, C-terminal, dimerisation JO41_06975 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_06975 IPR020667 DNA mismatch repair protein, MutL JO41_06975 IPR036890 JO41_06975 JO41_06975 IPR037198 JO41_06975 JO41_06980 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06980 IPR033186 JO41_06980 JO41_06990 IPR003607 HD/PDEase domain JO41_06995 IPR000432 DNA mismatch repair protein MutS, C-terminal JO41_06995 IPR002625 Smr protein/MutS2 C-terminal JO41_06995 IPR005747 Endonuclease MutS2 JO41_06995 IPR007696 DNA mismatch repair protein MutS, core JO41_06995 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06995 IPR036063 JO41_06995 JO41_06995 IPR036187 JO41_06995 JO41_07000 IPR001029 Flagellin, D0/D1 domain JO41_07000 IPR001492 Flagellin JO41_07010 IPR004013 PHP, C-terminal JO41_07010 IPR016195 Polymerase/histidinol phosphatase-like JO41_07015 IPR001792 Acylphosphatase-like domain JO41_07015 IPR017968 Acylphosphatase, conserved site JO41_07015 IPR036046 JO41_07015 JO41_07030 IPR001757 Cation-transporting P-type ATPase JO41_07030 IPR008250 P-type ATPase, A domain JO41_07030 IPR018303 P-type ATPase, phosphorylation site JO41_07030 IPR023214 HAD-like domain JO41_07030 IPR023299 P-type ATPase, cytoplasmic domain N JO41_07030 IPR027256 Cation-transporting P-type ATPase, subfamily IB JO41_07030 IPR036412 JO41_07030 JO41_07050 IPR000121 PEP-utilising enzyme, C-terminal JO41_07050 IPR006318 Phosphoenolpyruvate-utilising enzyme JO41_07050 IPR008279 PEP-utilising enzyme, mobile domain JO41_07050 IPR008731 Phosphotransferase system, enzyme I N-terminal JO41_07050 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JO41_07050 IPR023151 PEP-utilising enzyme, conserved site JO41_07050 IPR024692 Phosphotransferase system, enzyme I JO41_07050 IPR036618 JO41_07050 JO41_07050 IPR036637 JO41_07050 JO41_07055 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JO41_07060 IPR004679 2-hydroxycarboxylate transporter JO41_07070 IPR006472 Citrate lyase, alpha subunit JO41_07070 IPR037171 JO41_07070 JO41_07075 IPR005000 HpcH/HpaI aldolase/citrate lyase domain JO41_07075 IPR011206 Citrate lyase beta subunit-like JO41_07075 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JO41_07080 IPR006495 Citrate lyase acyl carrier protein CitD JO41_07080 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein JO41_07085 IPR004821 Cytidyltransferase-like domain JO41_07085 IPR005216 Citrate lyase ligase JO41_07085 IPR013166 Citrate lyase ligase, C-terminal JO41_07085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_07085 IPR016181 Acyl-CoA N-acyltransferase JO41_07095 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_07095 IPR035093 JO41_07095 JO41_07105 IPR002716 PIN domain JO41_07105 IPR029060 PIN domain-like JO41_07115 IPR005225 Small GTP-binding protein domain JO41_07115 IPR006073 GTP binding domain JO41_07115 IPR015946 K homology domain-like, alpha/beta JO41_07115 IPR016484 GTP-binding protein EngA JO41_07115 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07115 IPR032859 JO41_07115 JO41_07120 IPR000551 MerR-type HTH domain JO41_07120 IPR009061 DNA binding domain, putative JO41_07130 IPR000943 RNA polymerase sigma-70 JO41_07130 IPR007624 RNA polymerase sigma-70 region 3 JO41_07130 IPR007627 RNA polymerase sigma-70 region 2 JO41_07130 IPR007630 RNA polymerase sigma-70 region 4 JO41_07130 IPR012845 RNA polymerase sigma factor, FliA/WhiG JO41_07130 IPR013324 RNA polymerase sigma factor, region 3/4 JO41_07130 IPR013325 RNA polymerase sigma factor, region 2 JO41_07130 IPR014284 RNA polymerase sigma-70 like domain JO41_07135 IPR005646 Protein of unknown function DUF342 JO41_07135 IPR032782 JO41_07135 JO41_07135 IPR038247 JO41_07135 JO41_07150 IPR006405 Nicotinate phosphoribosyltransferase pncB type JO41_07150 IPR007229 Nicotinate phosphoribosyltransferase family JO41_07150 IPR013785 Aldolase-type TIM barrel JO41_07150 IPR036068 JO41_07150 JO41_07155 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily JO41_07155 IPR015943 WD40/YVTN repeat-like-containing domain JO41_07155 IPR025666 JO41_07155 JO41_07165 IPR000792 Transcription regulator LuxR, C-terminal JO41_07165 IPR016032 Signal transduction response regulator, C-terminal effector JO41_07165 IPR036388 JO41_07165 JO41_07170 IPR005135 Endonuclease/exonuclease/phosphatase JO41_07170 IPR036691 JO41_07170 JO41_07175 IPR004131 Pyrophosphate-energised proton pump JO41_07180 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JO41_07180 IPR002305 Aminoacyl-tRNA synthetase, class Ic JO41_07180 IPR002306 Tryptophan-tRNA ligase JO41_07180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_07180 IPR024109 Tryptophan-tRNA ligase, bacterial-type JO41_07195 IPR006214 Bax inhibitor 1-related JO41_07220 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_07225 IPR001460 Penicillin-binding protein, transpeptidase JO41_07225 IPR005311 Penicillin-binding protein, dimerisation domain JO41_07225 IPR005543 PASTA domain JO41_07225 IPR012338 Beta-lactamase/transpeptidase-like JO41_07225 IPR036138 JO41_07225 JO41_07230 IPR000223 Peptidase S26A, signal peptidase I JO41_07230 IPR036286 JO41_07230 JO41_07250 IPR013783 Immunoglobulin-like fold JO41_07255 IPR004846 Type II/III secretion system JO41_07265 IPR003284 Salmonella virulence plasmid 65kDa B protein JO41_07265 IPR022045 Insecticide toxin TcdB middle/N-terminal JO41_07265 IPR022385 Rhs repeat-associated core JO41_07375 IPR032675 JO41_07375 JO41_07395 IPR001440 Tetratricopeptide TPR1 JO41_07395 IPR011990 Tetratricopeptide-like helical domain JO41_07395 IPR019734 Tetratricopeptide repeat JO41_07410 IPR011990 Tetratricopeptide-like helical domain JO41_07495 IPR002847 Coenzyme F420:L-glutamate ligase-like domain JO41_07505 IPR000086 NUDIX hydrolase domain JO41_07505 IPR015797 NUDIX hydrolase domain-like JO41_07505 IPR020476 NUDIX hydrolase JO41_07530 IPR001872 Peptidase A8, signal peptidase II JO41_07535 IPR011990 Tetratricopeptide-like helical domain JO41_07535 IPR019734 Tetratricopeptide repeat JO41_07540 IPR002481 Ferric-uptake regulator JO41_07540 IPR036388 JO41_07540 JO41_07540 IPR036390 JO41_07540 JO41_07550 IPR001478 PDZ domain JO41_07550 IPR001940 Peptidase S1C JO41_07550 IPR009003 Trypsin-like cysteine/serine peptidase domain JO41_07550 IPR036034 JO41_07550 JO41_07555 IPR003593 AAA+ ATPase domain JO41_07555 IPR004504 DNA repair protein RadA JO41_07555 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_07555 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA JO41_07555 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_07555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07575 IPR006680 Amidohydrolase 1 JO41_07575 IPR011059 Metal-dependent hydrolase, composite domain JO41_07575 IPR032466 JO41_07575 JO41_07580 IPR006679 Adenine deaminase JO41_07580 IPR006680 Amidohydrolase 1 JO41_07580 IPR011059 Metal-dependent hydrolase, composite domain JO41_07580 IPR026912 Adenine deaminase C-terminal domain JO41_07580 IPR032466 JO41_07580 JO41_07585 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_07585 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding JO41_07585 IPR036856 JO41_07585 JO41_07585 IPR037165 JO41_07585 JO41_07590 IPR002346 Molybdopterin dehydrogenase, FAD-binding JO41_07590 IPR005107 CO dehydrogenase flavoprotein, C-terminal JO41_07590 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JO41_07590 IPR036318 JO41_07590 JO41_07590 IPR036683 JO41_07590 JO41_07595 IPR001041 2Fe-2S ferredoxin-type domain JO41_07595 IPR002888 [2Fe-2S]-binding JO41_07595 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site JO41_07595 IPR012675 Beta-grasp domain JO41_07595 IPR036010 JO41_07595 JO41_07595 IPR036884 JO41_07595 JO41_07605 IPR009057 Homeodomain-like JO41_07605 IPR010499 Bacterial transcription activator, effector binding JO41_07605 IPR011256 Regulatory factor, effector binding domain JO41_07605 IPR018060 DNA binding HTH domain, AraC-type JO41_07605 IPR018062 HTH domain AraC-type, conserved site JO41_07605 IPR020449 Transcription regulator HTH, AraC- type JO41_07605 IPR029442 GyrI-like small molecule binding domain JO41_07610 IPR003812 Fido domain JO41_07610 IPR006440 Death on curing protein JO41_07610 IPR036597 JO41_07610 JO41_07620 IPR006467 MiaB-like tRNA modifying enzyme JO41_07620 IPR006638 Elongator protein 3/MiaB/NifB JO41_07620 IPR007197 Radical SAM JO41_07620 IPR013848 Methylthiotransferase, N-terminal JO41_07620 IPR020612 Methylthiotransferase, conserved site JO41_07620 IPR023404 Radical SAM, alpha/beta horseshoe JO41_07625 IPR011990 Tetratricopeptide-like helical domain JO41_07625 IPR019734 Tetratricopeptide repeat JO41_07630 IPR007607 Protein of unknown function DUF583 JO41_07635 IPR006638 Elongator protein 3/MiaB/NifB JO41_07635 IPR007197 Radical SAM JO41_07635 IPR010723 HemN, C-terminal domain JO41_07635 IPR023404 Radical SAM, alpha/beta horseshoe JO41_07640 IPR000223 Peptidase S26A, signal peptidase I JO41_07640 IPR019533 Peptidase S26 JO41_07640 IPR036286 JO41_07640 JO41_07645 IPR000037 SsrA-binding protein JO41_07645 IPR020081 SsrA-binding protein, conserved site JO41_07645 IPR023620 Small protein B JO41_07655 IPR006554 Helicase-like, DEXD box c2 type JO41_07655 IPR006555 ATP-dependent helicase, C-terminal JO41_07655 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07660 IPR002123 Phospholipid/glycerol acyltransferase JO41_07675 IPR003660 HAMP linker domain JO41_07675 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_07675 IPR004090 Chemotaxis methyl-accepting receptor JO41_07675 IPR033479 JO41_07675 JO41_07680 IPR005358 Putative zinc- or iron-chelating domain containing protein JO41_07685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07685 IPR031322 JO41_07685 JO41_07690 IPR007353 Protein of unknown function DUF421 JO41_07690 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain JO41_07705 IPR024471 Protein of unknown function DUF2715 JO41_07710 IPR002379 V-ATPase proteolipid subunit C-like domain JO41_07710 IPR035921 JO41_07710 JO41_07720 IPR002699 ATPase, V1 complex, subunit D JO41_07725 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JO41_07725 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain JO41_07725 IPR022879 V-type ATP synthase regulatory subunit B/beta JO41_07725 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07730 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JO41_07730 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain JO41_07730 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JO41_07730 IPR022878 V-type ATP synthase catalytic alpha chain JO41_07730 IPR023366 ATP synthase subunit alpha-like domain JO41_07730 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal JO41_07730 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07730 IPR031686 JO41_07730 JO41_07740 IPR002842 ATPase, V1/A1 complex, subunit E JO41_07740 IPR038495 JO41_07740 JO41_07745 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JO41_07745 IPR011013 Galactose mutarotase-like domain JO41_07745 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup JO41_07745 IPR015443 Aldose 1-epimerase JO41_07745 IPR018052 Aldose 1-epimerase, conserved site JO41_07755 IPR005474 Transketolase, N-terminal JO41_07755 IPR005475 Transketolase-like, pyrimidine-binding domain JO41_07755 IPR005477 Deoxyxylulose-5-phosphate synthase JO41_07755 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II JO41_07755 IPR029061 Thiamin diphosphate-binding fold JO41_07755 IPR033248 JO41_07755 JO41_07760 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO41_07765 IPR005247 YbhB/YbcL JO41_07765 IPR008914 Phosphatidylethanolamine-binding protein PEBP JO41_07765 IPR036610 JO41_07765 JO41_07770 IPR005320 Peptidase S51 JO41_07770 IPR029062 Class I glutamine amidotransferase-like JO41_07785 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal JO41_07785 IPR029058 Alpha/Beta hydrolase fold JO41_07790 IPR013149 Alcohol dehydrogenase, C-terminal JO41_07790 IPR020843 Polyketide synthase, enoylreductase JO41_07790 IPR036291 JO41_07790 JO41_07805 IPR002716 PIN domain JO41_07805 IPR022907 VapC family JO41_07805 IPR029060 PIN domain-like JO41_07815 IPR005149 Transcription regulator PadR N-terminal JO41_07815 IPR036388 JO41_07815 JO41_07815 IPR036390 JO41_07815 JO41_07820 IPR003675 CAAX amino terminal protease JO41_07845 IPR025357 Domain of unknown function DUF4261 JO41_07860 IPR003680 Flavodoxin-like fold JO41_07860 IPR029039 Flavoprotein-like JO41_07865 IPR013332 Ketopantoate reductase, N-terminal domain JO41_07865 IPR036291 JO41_07865 JO41_07870 IPR000760 Inositol monophosphatase JO41_07875 IPR003439 ABC transporter-like JO41_07875 IPR003593 AAA+ ATPase domain JO41_07875 IPR008995 Molybdate/tungstate binding, C-terminal JO41_07875 IPR017871 ABC transporter, conserved site JO41_07875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07880 IPR000515 MetI-like domain JO41_07880 IPR035906 JO41_07880 JO41_07895 IPR000835 MarR-type HTH domain JO41_07895 IPR031011 JO41_07895 JO41_07895 IPR036388 JO41_07895 JO41_07895 IPR036390 JO41_07895 JO41_07900 IPR011101 Burkholderia phage phiE125, Gp37 JO41_07900 IPR031010 JO41_07900 JO41_07905 IPR007197 Radical SAM JO41_07905 IPR031012 JO41_07905 JO41_07915 IPR007621 TPM domain JO41_07920 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain JO41_07920 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal JO41_07920 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II JO41_07920 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JO41_07920 IPR011895 Pyruvate-flavodoxin oxidoreductase JO41_07920 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_07920 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain JO41_07920 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain JO41_07920 IPR029061 Thiamin diphosphate-binding fold JO41_07920 IPR033412 JO41_07920 JO41_07925 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site JO41_07925 IPR001650 Helicase, C-terminal JO41_07925 IPR011545 DEAD/DEAH box helicase domain JO41_07925 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_07925 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07930 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JO41_07930 IPR002933 Peptidase M20 JO41_07930 IPR010161 Peptidase M20B, tripeptide aminopeptidase JO41_07930 IPR011650 Peptidase M20, dimerisation domain JO41_07930 IPR036264 JO41_07930 JO41_07935 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JO41_07935 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain JO41_07935 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JO41_07935 IPR013760 DNA topoisomerase, type IIA-like domain JO41_07940 IPR000873 AMP-dependent synthetase/ligase JO41_07940 IPR020845 AMP-binding, conserved site JO41_07950 IPR003445 Cation transporter JO41_07950 IPR004772 Potassium uptake protein TrkH family JO41_07955 IPR003148 Regulator of K+ conductance, N-terminal JO41_07955 IPR006036 Potassium uptake protein TrkA JO41_07955 IPR006037 Regulator of K+ conductance, C-terminal JO41_07955 IPR036291 JO41_07955 JO41_07955 IPR036721 JO41_07955 JO41_07960 IPR006626 Parallel beta-helix repeat JO41_07960 IPR011050 Pectin lyase fold/virulence factor JO41_07965 IPR000740 GrpE nucleotide exchange factor JO41_07965 IPR009012 GrpE nucleotide exchange factor, head JO41_07965 IPR013805 GrpE nucleotide exchange factor, coiled-coil JO41_07970 IPR012725 Chaperone DnaK JO41_07970 IPR013126 Heat shock protein 70 family JO41_07970 IPR018181 Heat shock protein 70, conserved site JO41_07970 IPR029047 Heat shock protein 70kD, peptide-binding domain JO41_07970 IPR029048 Heat shock protein 70kD, C-terminal domain JO41_07975 IPR001305 Heat shock protein DnaJ, cysteine-rich domain JO41_07975 IPR001623 DnaJ domain JO41_07975 IPR002939 Chaperone DnaJ, C-terminal JO41_07975 IPR008971 HSP40/DnaJ peptide-binding JO41_07975 IPR012724 Chaperone DnaJ JO41_07975 IPR018253 DnaJ domain, conserved site JO41_07975 IPR036410 JO41_07975 JO41_07975 IPR036869 JO41_07975 JO41_07985 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site JO41_07985 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain JO41_07985 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding JO41_07985 IPR023546 Methylated-DNA--protein-cysteine methyltransferase JO41_07985 IPR036217 JO41_07985 JO41_07985 IPR036388 JO41_07985 JO41_07985 IPR036631 JO41_07985 JO41_07995 IPR021228 Protein of unknown function DUF2791 JO41_07995 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08000 IPR001650 Helicase, C-terminal JO41_08000 IPR011545 DEAD/DEAH box helicase domain JO41_08000 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_08000 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08010 IPR002563 Flavin reductase-like, FMN-binding JO41_08010 IPR012349 FMN-binding split barrel JO41_08015 IPR001991 Sodium:dicarboxylate symporter JO41_08015 IPR036458 JO41_08015 JO41_08020 IPR002646 Poly A polymerase, head domain JO41_08020 IPR006675 Uncharacterised domain HDIG JO41_08020 IPR032810 JO41_08020 JO41_08020 IPR032828 JO41_08020 JO41_08025 IPR000445 Helix-hairpin-helix motif JO41_08025 IPR003265 HhH-GPD domain JO41_08025 IPR011257 DNA glycosylase JO41_08025 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JO41_08030 IPR011892 Cytidylate kinase, putative JO41_08030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08035 IPR005229 Conserved hypothetical protein CHP00255 JO41_08035 IPR013527 YicC-like, N-terminal JO41_08035 IPR013551 Domain of unknown function DUF1732 JO41_08040 IPR000713 Mur ligase, N-terminal JO41_08040 IPR004101 Mur ligase, C-terminal JO41_08040 IPR005758 UDP-N-acetylmuramate-alanine ligase JO41_08040 IPR013221 Mur ligase, central JO41_08040 IPR036565 JO41_08040 JO41_08040 IPR036615 JO41_08040 JO41_08050 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JO41_08050 IPR036291 JO41_08050 JO41_08055 IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal JO41_08055 IPR016636 3-oxo-5-alpha-steroid 4-dehydrogenase JO41_08060 IPR000445 Helix-hairpin-helix motif JO41_08060 IPR003265 HhH-GPD domain JO41_08060 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif JO41_08060 IPR004036 Endonuclease III-like, conserved site-2 JO41_08060 IPR005759 Endonuclease III JO41_08060 IPR011257 DNA glycosylase JO41_08060 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JO41_08065 IPR011152 Phosphoesterase MJ0912 JO41_08065 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type JO41_08065 IPR029052 Metallo-dependent phosphatase-like JO41_08075 IPR012312 Haemerythrin/HHE cation-binding motif JO41_08080 IPR005532 Formylglycine-generating sulphatase enzyme domain JO41_08080 IPR016187 C-type lectin fold JO41_08085 IPR012547 Protein of unknown function DUF1703 JO41_08085 IPR018631 AAA-ATPase-like domain JO41_08085 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08090 IPR002104 Integrase, catalytic JO41_08090 IPR011010 DNA breaking-rejoining enzyme, catalytic core JO41_08090 IPR013762 Integrase-like, catalytic core JO41_08095 IPR018597 Bacteriophage Tuc2009, YjcQ JO41_08095 IPR036388 JO41_08095 JO41_08095 IPR036390 JO41_08095 JO41_08125 IPR000064 Endopeptidase, NLPC/P60 domain JO41_08125 IPR038765 JO41_08125 JO41_08145 IPR009660 Bacteriophage A500, Gp15 JO41_08160 IPR021080 Minor capsid protein JO41_08165 IPR019612 Minor capsid protein, putative JO41_08190 IPR019612 Minor capsid protein, putative JO41_08210 IPR009636 Bacteriophage mv4, Gp20 JO41_08260 IPR009319 Bacteriophage A118, Gp4, minor capsid JO41_08275 IPR006437 Bacteriophage terminase, large subunit JO41_08275 IPR035412 JO41_08275 JO41_08275 IPR035413 JO41_08275 JO41_08325 IPR002611 IstB-like ATP-binding protein JO41_08325 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08375 IPR000424 Primosome PriB/single-strand DNA-binding JO41_08375 IPR011344 Single-stranded DNA-binding protein JO41_08375 IPR012340 Nucleic acid-binding, OB-fold JO41_08380 IPR008840 Siphovirus Gp157 JO41_08390 IPR011856 tRNA endonuclease-like domain JO41_08415 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain JO41_08415 IPR005215 Trigger factor JO41_08415 IPR008880 Trigger factor, C-terminal domain JO41_08415 IPR008881 Trigger factor, ribosome-binding, bacterial JO41_08415 IPR027304 Trigger factor/SurA domain JO41_08415 IPR036611 JO41_08415 JO41_08415 IPR037041 JO41_08415 JO41_08420 IPR001907 ATP-dependent Clp protease proteolytic subunit JO41_08420 IPR018215 ClpP, active site JO41_08420 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JO41_08420 IPR029045 ClpP/crotonase-like domain JO41_08420 IPR033135 JO41_08420 JO41_08425 IPR003593 AAA+ ATPase domain JO41_08425 IPR003959 ATPase, AAA-type, core JO41_08425 IPR004487 Clp protease, ATP-binding subunit ClpX JO41_08425 IPR010603 Zinc finger, ClpX C4-type JO41_08425 IPR019489 Clp ATPase, C-terminal JO41_08425 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08425 IPR038366 JO41_08425 JO41_08435 IPR000713 Mur ligase, N-terminal JO41_08435 IPR004101 Mur ligase, C-terminal JO41_08435 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase JO41_08435 IPR013221 Mur ligase, central JO41_08435 IPR035911 JO41_08435 JO41_08435 IPR036565 JO41_08435 JO41_08435 IPR036615 JO41_08435 JO41_08440 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain JO41_08440 IPR013785 Aldolase-type TIM barrel JO41_08440 IPR017853 Glycoside hydrolase, superfamily JO41_08445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_08450 IPR003675 CAAX amino terminal protease JO41_08455 IPR022742 Putative lysophospholipase JO41_08455 IPR029058 Alpha/Beta hydrolase fold JO41_08460 IPR015883 Glycoside hydrolase family 20, catalytic core JO41_08460 IPR017853 Glycoside hydrolase, superfamily JO41_08465 IPR005146 B3/B4 tRNA-binding domain JO41_08465 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JO41_08470 IPR000640 Translation elongation factor EFG, V domain JO41_08470 IPR000795 Elongation factor, GTP-binding domain JO41_08470 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JO41_08470 IPR005225 Small GTP-binding protein domain JO41_08470 IPR006297 Elongation factor 4 JO41_08470 IPR009000 Translation protein, beta-barrel domain JO41_08470 IPR013842 GTP-binding protein LepA, C-terminal JO41_08470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08470 IPR031157 JO41_08470 JO41_08470 IPR035647 JO41_08470 JO41_08470 IPR038363 JO41_08470 JO41_08475 IPR001278 Arginine-tRNA ligase JO41_08475 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JO41_08475 IPR005148 Arginyl tRNA synthetase N-terminal domain JO41_08475 IPR008909 DALR anticodon binding JO41_08475 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JO41_08475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_08475 IPR035684 JO41_08475 JO41_08475 IPR036695 JO41_08475 JO41_08480 IPR002881 Domain of unknown function DUF58 JO41_08480 IPR036465 JO41_08480 JO41_08490 IPR003876 Arginine deiminase JO41_08495 IPR002292 Ornithine/putrescine carbamoyltransferase JO41_08495 IPR006130 Aspartate/ornithine carbamoyltransferase JO41_08495 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JO41_08495 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JO41_08495 IPR024904 Ornithine carbamoyltransferase JO41_08495 IPR036901 JO41_08495 JO41_08500 IPR001048 Aspartate/glutamate/uridylate kinase JO41_08500 IPR003964 Carbamate kinase JO41_08500 IPR036393 JO41_08500 JO41_08505 IPR018385 C4-dicarboxylate anaerobic carrier-like JO41_08515 IPR004101 Mur ligase, C-terminal JO41_08515 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase JO41_08515 IPR013221 Mur ligase, central JO41_08515 IPR036565 JO41_08515 JO41_08515 IPR036615 JO41_08515 JO41_08520 IPR000836 Phosphoribosyltransferase domain JO41_08520 IPR005764 Adenine phosphoribosyl transferase JO41_08520 IPR029057 Phosphoribosyltransferase-like JO41_08525 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JO41_08525 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JO41_08525 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JO41_08525 IPR004522 Asparagine-tRNA ligase JO41_08525 IPR012340 Nucleic acid-binding, OB-fold JO41_08530 IPR003717 Recombination protein O, RecO JO41_08530 IPR037278 JO41_08530 JO41_08535 IPR032710 JO41_08535 JO41_08535 IPR037401 JO41_08535 JO41_08540 IPR002577 Helix-turn-helix, HxlR type JO41_08540 IPR036388 JO41_08540 JO41_08540 IPR036390 JO41_08540 JO41_08565 IPR001091 Restriction/modification DNA-methylase JO41_08565 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_08565 IPR002941 DNA methylase N-4/N-6 JO41_08565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_08570 IPR007637 Restriction endonuclease, type II, DpmII-like JO41_08570 IPR021191 Restriction endonuclease, type II, DpmII JO41_08580 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_08580 IPR012263 Adenine modification methylase, M.EcoRV-type JO41_08580 IPR012327 D12 class N6 adenine-specific DNA methyltransferase JO41_08580 IPR023095 Adenine-specific methyltransferase, domain 2 JO41_08580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_08605 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JO41_08605 IPR036188 JO41_08605 JO41_08610 IPR006076 FAD dependent oxidoreductase JO41_08610 IPR007419 BFD-like [2Fe-2S]-binding domain JO41_08610 IPR036188 JO41_08610 JO41_08615 IPR000577 JO41_08615 JO41_08615 IPR005999 Glycerol kinase JO41_08615 IPR018483 Carbohydrate kinase, FGGY, conserved site JO41_08615 IPR018484 Carbohydrate kinase, FGGY, N-terminal JO41_08615 IPR018485 Carbohydrate kinase, FGGY, C-terminal JO41_08620 IPR007213 Leucine carboxyl methyltransferase JO41_08620 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP JO41_08620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_08630 IPR005746 Thioredoxin JO41_08630 IPR013766 Thioredoxin domain JO41_08630 IPR017937 Thioredoxin, conserved site JO41_08630 IPR036249 JO41_08630 JO41_08635 IPR005235 Metallophosphoesterase, MG_246/BB_0505 JO41_08635 IPR029052 Metallo-dependent phosphatase-like JO41_08640 IPR000192 Aminotransferase class V domain JO41_08640 IPR010970 Cysteine desulfurase, SufS JO41_08640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_08640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_08640 IPR015424 Pyridoxal phosphate-dependent transferase JO41_08640 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site JO41_08645 IPR000825 SUF system FeS cluster assembly, SufBD JO41_08645 IPR011542 SUF system FeS cluster assembly, SufD JO41_08645 IPR037284 JO41_08645 JO41_08650 IPR000825 SUF system FeS cluster assembly, SufBD JO41_08650 IPR010231 SUF system FeS cluster assembly, SufB JO41_08650 IPR037284 JO41_08650 JO41_08655 IPR003439 ABC transporter-like JO41_08655 IPR003593 AAA+ ATPase domain JO41_08655 IPR010230 FeS cluster assembly SUF system, ATPase SufC JO41_08655 IPR017871 ABC transporter, conserved site JO41_08655 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08665 IPR000453 Chorismate synthase JO41_08665 IPR020541 Chorismate synthase, conserved site JO41_08665 IPR035904 JO41_08665 JO41_08695 IPR021729 Domain of unknown function DUF3298 JO41_08695 IPR025303 Domain of unknown function DUF4163 JO41_08695 IPR037126 JO41_08695 JO41_08700 IPR003753 Exonuclease VII, large subunit JO41_08700 IPR020579 Exonuclease VII, large subunit, C-terminal JO41_08700 IPR025824 OB-fold nucleic acid binding domain JO41_08710 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial JO41_08710 IPR024740 Hen1, N-terminal JO41_08710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_08710 IPR038546 JO41_08710 JO41_08715 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JO41_08715 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase JO41_08715 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08715 IPR029052 Metallo-dependent phosphatase-like JO41_08715 IPR032380 JO41_08715 JO41_08715 IPR032390 JO41_08715 JO41_08720 IPR001907 ATP-dependent Clp protease proteolytic subunit JO41_08720 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JO41_08720 IPR029045 ClpP/crotonase-like domain JO41_08720 IPR033135 JO41_08720 JO41_08725 IPR025427 Protein of unknown function DUF4160 JO41_08740 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08745 IPR000223 Peptidase S26A, signal peptidase I JO41_08745 IPR015927 Peptidase S24/S26A/S26B/S26C JO41_08745 IPR019757 Peptidase S26A, signal peptidase I, lysine active site JO41_08745 IPR036286 JO41_08745 JO41_08755 IPR003660 HAMP linker domain JO41_08755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_08755 IPR004090 Chemotaxis methyl-accepting receptor JO41_08755 IPR029151 Periplasmic sensor domain-like JO41_08755 IPR033479 JO41_08755 JO41_08765 IPR001440 Tetratricopeptide TPR1 JO41_08765 IPR011990 Tetratricopeptide-like helical domain JO41_08765 IPR019734 Tetratricopeptide repeat JO41_08770 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr JO41_08770 IPR007197 Radical SAM JO41_08770 IPR013785 Aldolase-type TIM barrel JO41_08770 IPR027492 Dual-specificity RNA methyltransferase RlmN JO41_08780 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JO41_08780 IPR036737 JO41_08780 JO41_08785 IPR002347 Glucose/ribitol dehydrogenase JO41_08785 IPR036291 JO41_08785 JO41_08790 IPR001226 Flavodoxin, conserved site JO41_08790 IPR008254 Flavodoxin/nitric oxide synthase JO41_08790 IPR010086 Flavodoxin, long chain JO41_08790 IPR029039 Flavoprotein-like JO41_08795 IPR011335 Restriction endonuclease type II-like JO41_08795 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08795 IPR038726 JO41_08795 JO41_08805 IPR001308 Electron transfer flavoprotein, alpha subunit JO41_08805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_08805 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal JO41_08805 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal JO41_08805 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site JO41_08805 IPR029035 DHS-like NAD/FAD-binding domain JO41_08810 IPR012255 Electron transfer flavoprotein, beta subunit JO41_08810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_08810 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal JO41_08815 IPR006089 Acyl-CoA dehydrogenase, conserved site JO41_08815 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JO41_08815 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JO41_08815 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JO41_08815 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JO41_08815 IPR036250 JO41_08815 JO41_08815 IPR037069 JO41_08815 JO41_08820 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent JO41_08820 IPR015590 Aldehyde dehydrogenase domain JO41_08820 IPR016161 Aldehyde/histidinol dehydrogenase JO41_08820 IPR016162 Aldehyde dehydrogenase, N-terminal JO41_08820 IPR016163 Aldehyde dehydrogenase, C-terminal JO41_08820 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JO41_08825 IPR004481 Sodium/potassium/calcium exchanger JO41_08825 IPR004837 Sodium/calcium exchanger membrane region JO41_08840 IPR026898 Protease PrsW JO41_08845 IPR000816 Peptidase C15, pyroglutamyl peptidase I JO41_08845 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like JO41_08845 IPR029762 Pyroglutamyl peptidase I, bacterial-type JO41_08845 IPR033693 JO41_08845 JO41_08845 IPR033694 JO41_08845 JO41_08845 IPR036440 JO41_08845 JO41_08850 IPR009323 Protein of unknown function DUF979 JO41_08855 IPR010374 Protein of unknown function DUF969 JO41_08860 IPR007460 Burkholderia phage Bups phi1, Orf7.3 JO41_08860 IPR038573 JO41_08860 JO41_08865 IPR025528 Protein of unknown function DUF4415 JO41_08870 IPR001650 Helicase, C-terminal JO41_08870 IPR006935 Helicase/UvrB domain JO41_08870 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_08870 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08870 IPR032438 JO41_08870 JO41_08870 IPR032830 JO41_08870 JO41_08875 IPR001444 Flagellar basal body rod protein, N-terminal JO41_08875 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_08875 IPR012836 Flagellar basal-body rod FlgF JO41_08875 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JO41_08875 IPR037925 JO41_08875 JO41_08880 IPR001444 Flagellar basal body rod protein, N-terminal JO41_08880 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_08880 IPR012834 Flagellar basal-body rod FlgG JO41_08880 IPR019776 Flagellar basal body rod protein, conserved site JO41_08880 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JO41_08880 IPR037925 JO41_08880 JO41_08885 IPR019301 Flagellar protein FlgJ, N-terminal JO41_08895 IPR002491 ABC transporter periplasmic binding domain JO41_08900 IPR003439 ABC transporter-like JO41_08900 IPR003593 AAA+ ATPase domain JO41_08900 IPR017871 ABC transporter, conserved site JO41_08900 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08905 IPR000522 ABC transporter, permease protein JO41_08905 IPR037294 JO41_08905 JO41_08910 IPR012318 Helix-turn-helix motif, Crp-type JO41_08910 IPR018490 Cyclic nucleotide-binding-like JO41_08910 IPR036390 JO41_08910 JO41_08915 IPR007161 Protein of unknown function DUF364 JO41_08920 IPR011051 RmlC-like cupin domain JO41_08920 IPR013096 Cupin 2, conserved barrel JO41_08920 IPR014710 RmlC-like jelly roll fold JO41_08930 IPR005543 PASTA domain JO41_08935 IPR002376 Formyl transferase, N-terminal JO41_08935 IPR005793 Formyl transferase, C-terminal JO41_08935 IPR005794 Methionyl-tRNA formyltransferase JO41_08935 IPR011034 Formyl transferase, C-terminal-like JO41_08935 IPR036477 JO41_08935 JO41_08935 IPR037022 JO41_08935 JO41_08940 IPR023635 Peptide deformylase JO41_08940 IPR036821 JO41_08940 JO41_08955 IPR000182 GNAT domain JO41_08955 IPR005361 Uncharacterised protein family UPF0158 JO41_08955 IPR016181 Acyl-CoA N-acyltransferase JO41_08960 IPR000941 Enolase JO41_08960 IPR020809 Enolase, conserved site JO41_08960 IPR020810 Enolase, C-terminal JO41_08960 IPR020811 Enolase, N-terminal JO41_08960 IPR029017 Enolase N-terminal domain-like JO41_08960 IPR036849 JO41_08960 JO41_08965 IPR006056 Enamine/imine deaminase YjgF-like JO41_08965 IPR006175 YjgF/Yer057p/UK114 family JO41_08965 IPR035959 JO41_08965 JO41_08975 IPR010898 Heptaprenyl diphosphate synthase component I JO41_08980 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain JO41_08985 IPR001787 Ribosomal protein L21 JO41_08985 IPR018258 Ribosomal protein L21, conserved site JO41_08985 IPR028909 Ribosomal protein L21-like JO41_08985 IPR036164 JO41_08985 JO41_08990 IPR007422 Protein of unknown function DUF464 JO41_08990 IPR036764 JO41_08990 JO41_08995 IPR001684 Ribosomal protein L27 JO41_08995 IPR018261 Ribosomal protein L27, conserved site JO41_09000 IPR006073 GTP binding domain JO41_09000 IPR006074 GTP1/OBG, conserved site JO41_09000 IPR006169 GTP1/OBG domain JO41_09000 IPR014100 GTP-binding protein Obg/CgtA JO41_09000 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09000 IPR036726 JO41_09000 JO41_09005 IPR004821 Cytidyltransferase-like domain JO41_09005 IPR005248 Probable nicotinate-nucleotide adenylyltransferase JO41_09005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_09015 IPR004474 Cell envelope-related transcriptional attenuator domain JO41_09015 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain JO41_09020 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JO41_09025 IPR011989 Armadillo-like helical JO41_09025 IPR016024 Armadillo-type fold JO41_09030 IPR003728 Ribosome maturation factor RimP JO41_09030 IPR028989 Ribosome maturation factor RimP, N-terminal JO41_09030 IPR035956 JO41_09030 JO41_09030 IPR036847 JO41_09030 JO41_09035 IPR003029 Ribosomal protein S1, RNA-binding domain JO41_09035 IPR009019 K homology domain, prokaryotic type JO41_09035 IPR010213 Transcription termination factor NusA JO41_09035 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical JO41_09035 IPR012340 Nucleic acid-binding, OB-fold JO41_09035 IPR013735 Transcription factor NusA, N-terminal JO41_09035 IPR015946 K homology domain-like, alpha/beta JO41_09035 IPR022967 RNA-binding domain, S1 JO41_09035 IPR025249 KH domain, NusA-like JO41_09035 IPR030842 JO41_09035 JO41_09035 IPR036555 JO41_09035 JO41_09040 IPR000178 Translation initiation factor aIF-2, bacterial-like JO41_09040 IPR000795 Elongation factor, GTP-binding domain JO41_09040 IPR005225 Small GTP-binding protein domain JO41_09040 IPR006847 Translation initiation factor IF-2, N-terminal JO41_09040 IPR009000 Translation protein, beta-barrel domain JO41_09040 IPR023115 Translation initiation factor IF- 2, domain 3 JO41_09040 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09040 IPR036925 JO41_09040 JO41_09045 IPR000238 Ribosome-binding factor A JO41_09045 IPR015946 K homology domain-like, alpha/beta JO41_09045 IPR023799 Ribosome-binding factor A domain JO41_09050 IPR002501 Pseudouridine synthase II JO41_09050 IPR014780 tRNA pseudouridine synthase II, TruB JO41_09050 IPR020103 Pseudouridine synthase, catalytic domain JO41_09050 IPR032819 JO41_09050 JO41_09055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_09055 IPR015864 FAD synthetase JO41_09060 IPR000589 Ribosomal protein S15 JO41_09060 IPR005290 Ribosomal protein S15, bacterial-type JO41_09060 IPR009068 S15/NS1, RNA-binding JO41_09065 IPR001247 Exoribonuclease, phosphorolytic domain 1 JO41_09065 IPR003029 Ribosomal protein S1, RNA-binding domain JO41_09065 IPR004087 K Homology domain JO41_09065 IPR004088 K Homology domain, type 1 JO41_09065 IPR012162 Polyribonucleotide nucleotidyltransferase JO41_09065 IPR012340 Nucleic acid-binding, OB-fold JO41_09065 IPR015847 Exoribonuclease, phosphorolytic domain 2 JO41_09065 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain JO41_09065 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_09065 IPR022967 RNA-binding domain, S1 JO41_09065 IPR027408 PNPase/RNase PH domain JO41_09065 IPR036345 JO41_09065 JO41_09065 IPR036612 JO41_09065 JO41_09070 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase JO41_09070 IPR029054 dUTPase-like JO41_09070 IPR036157 JO41_09070 JO41_09075 IPR005495 Permease YjgP/YjgQ, predicted JO41_09080 IPR005495 Permease YjgP/YjgQ, predicted JO41_09085 IPR003660 HAMP linker domain JO41_09085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_09085 IPR004090 Chemotaxis methyl-accepting receptor JO41_09085 IPR029151 Periplasmic sensor domain-like JO41_09085 IPR033479 JO41_09085 JO41_09090 IPR000644 CBS domain JO41_09090 IPR005170 Transporter-associated domain JO41_09090 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JO41_09090 IPR036318 JO41_09090 JO41_09100 IPR003713 Flagellar protein FliS JO41_09100 IPR036584 JO41_09100 JO41_09105 IPR003660 HAMP linker domain JO41_09105 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_09105 IPR004090 Chemotaxis methyl-accepting receptor JO41_09105 IPR029150 Sensory domain of two-component sensor kinase JO41_09105 IPR029151 Periplasmic sensor domain-like JO41_09115 IPR006439 HAD hydrolase, subfamily IA JO41_09115 IPR023198 Phosphoglycolate phosphatase, domain 2 JO41_09115 IPR023214 HAD-like domain JO41_09115 IPR036412 JO41_09115 JO41_09120 IPR000620 Drug/metabolite transporter JO41_09125 IPR024258 Protein of unknown function DUF3798 JO41_09125 IPR028082 Periplasmic binding protein-like I JO41_09130 IPR003439 ABC transporter-like JO41_09130 IPR003593 AAA+ ATPase domain JO41_09130 IPR017871 ABC transporter, conserved site JO41_09130 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09135 IPR001851 ABC transporter, permease JO41_09140 IPR001851 ABC transporter, permease JO41_09150 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JO41_09150 IPR002942 RNA-binding S4 domain JO41_09150 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_09150 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JO41_09150 IPR020103 Pseudouridine synthase, catalytic domain JO41_09150 IPR036986 JO41_09150 JO41_09155 IPR000262 FMN-dependent dehydrogenase JO41_09155 IPR013785 Aldolase-type TIM barrel JO41_09165 IPR000515 MetI-like domain JO41_09165 IPR035906 JO41_09165 JO41_09170 IPR000515 MetI-like domain JO41_09170 IPR035906 JO41_09170 JO41_09175 IPR003439 ABC transporter-like JO41_09175 IPR003593 AAA+ ATPase domain JO41_09175 IPR012693 ABC transporter, phosphonate import, PhnC JO41_09175 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09190 IPR000845 Nucleoside phosphorylase domain JO41_09190 IPR004402 Purine nucleoside phosphorylase DeoD-type JO41_09190 IPR018016 Nucleoside phosphorylase, conserved site JO41_09190 IPR035994 JO41_09190 JO41_09210 IPR006714 Flagellar filament outer layer protein FlaA JO41_09215 IPR006714 Flagellar filament outer layer protein FlaA JO41_09235 IPR001567 Peptidase M3A/M3B JO41_09235 IPR011976 Peptidase M3B, oligoendopeptidase-related clade 2 JO41_09245 IPR012312 Haemerythrin/HHE cation-binding motif JO41_09245 IPR012827 Haemerythrin-like, metal-binding domain JO41_09245 IPR016131 Haemerythrin, iron-binding site JO41_09245 IPR035938 JO41_09245 JO41_09250 IPR004193 Glycoside hydrolase, family 13, N-terminal JO41_09250 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JO41_09250 IPR013780 Glycosyl hydrolase, family 13, all-beta JO41_09250 IPR013783 Immunoglobulin-like fold JO41_09250 IPR014756 Immunoglobulin E-set JO41_09250 IPR017853 Glycoside hydrolase, superfamily JO41_09255 IPR006059 Bacterial extracellular solute-binding, family 1 JO41_09255 IPR006060 Maltose binding protein JO41_09255 IPR006061 Bacterial extracellular solute-binding family 1, conserved site JO41_09260 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain JO41_09260 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JO41_09260 IPR013783 Immunoglobulin-like fold JO41_09260 IPR014756 Immunoglobulin E-set JO41_09260 IPR017853 Glycoside hydrolase, superfamily JO41_09270 IPR000515 MetI-like domain JO41_09270 IPR035906 JO41_09270 JO41_09275 IPR000515 MetI-like domain JO41_09275 IPR035906 JO41_09275 JO41_09290 IPR013986 DExx box DNA helicase domain JO41_09290 IPR014017 DNA helicase, UvrD-like, C-terminal JO41_09290 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09290 IPR034739 JO41_09290 JO41_09295 IPR001107 Band 7 protein JO41_09295 IPR036013 JO41_09295 JO41_09305 IPR001670 Alcohol dehydrogenase, iron-type JO41_09305 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JO41_09310 IPR000182 GNAT domain JO41_09310 IPR016181 Acyl-CoA N-acyltransferase JO41_09315 IPR025420 Domain of unknown function DUF4143 JO41_09315 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09320 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family JO41_09320 IPR004785 Ribose 5-phosphate isomerase B JO41_09320 IPR036569 JO41_09320 JO41_09325 IPR001647 DNA-binding HTH domain, TetR-type JO41_09325 IPR009057 Homeodomain-like JO41_09330 IPR003439 ABC transporter-like JO41_09330 IPR003593 AAA+ ATPase domain JO41_09330 IPR011527 ABC transporter type 1, transmembrane domain JO41_09330 IPR017871 ABC transporter, conserved site JO41_09330 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09330 IPR036640 JO41_09330 JO41_09335 IPR003439 ABC transporter-like JO41_09335 IPR003593 AAA+ ATPase domain JO41_09335 IPR011527 ABC transporter type 1, transmembrane domain JO41_09335 IPR017871 ABC transporter, conserved site JO41_09335 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09335 IPR036640 JO41_09335 JO41_09340 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JO41_09340 IPR004839 Aminotransferase, class I/classII JO41_09340 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_09340 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_09340 IPR015424 Pyridoxal phosphate-dependent transferase JO41_09340 IPR022518 Aspartate 4-decarboxylase JO41_09345 IPR006512 YidE/YbjL duplication JO41_09345 IPR022457 Aspartate-alanine antiporter JO41_09345 IPR036721 JO41_09345 JO41_09355 IPR001584 Integrase, catalytic core JO41_09355 IPR009057 Homeodomain-like JO41_09355 IPR012337 Ribonuclease H-like domain JO41_09355 IPR036397 JO41_09355 JO41_09365 IPR002018 Carboxylesterase, type B JO41_09365 IPR029058 Alpha/Beta hydrolase fold JO41_09370 IPR013560 Domain of unknown function DUF1722 JO41_09380 IPR029058 Alpha/Beta hydrolase fold JO41_09390 IPR005025 NADPH-dependent FMN reductase-like JO41_09390 IPR029039 Flavoprotein-like JO41_09395 IPR003675 CAAX amino terminal protease JO41_09400 IPR002589 Macro domain JO41_09430 IPR021136 Flagellar hook-length control protein-like, C-terminal JO41_09430 IPR038610 JO41_09430 JO41_09435 IPR005648 Flagellar hook capping protein JO41_09440 IPR001444 Flagellar basal body rod protein, N-terminal JO41_09440 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_09440 IPR011491 Flagellar basal body FlaE JO41_09440 IPR019776 Flagellar basal body rod protein, conserved site JO41_09440 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JO41_09440 IPR037058 JO41_09440 JO41_09440 IPR037925 JO41_09440 JO41_09445 IPR009384 Flagellar JO41_09450 IPR000540 Flagellar motor protein MotA, conserved site JO41_09450 IPR002898 MotA/TolQ/ExbB proton channel JO41_09455 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JO41_09455 IPR025713 Motility protein B, N-terminal domain JO41_09455 IPR036737 JO41_09455 JO41_09460 IPR005503 Flagellar basal body-associated protein FliL JO41_09465 IPR001543 Surface presentation of antigen (SpoA) JO41_09465 IPR001689 Flagellar motor switch protein FliM JO41_09465 IPR028976 CheC-like domain JO41_09465 IPR036429 JO41_09465 JO41_09470 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb JO41_09470 IPR001543 Surface presentation of antigen (SpoA) JO41_09470 IPR012826 Flagellar motor switch FliN JO41_09470 IPR028976 CheC-like domain JO41_09470 IPR036429 JO41_09470 JO41_09475 IPR022781 Flagellar biosynthesis protein, FliO JO41_09480 IPR005837 Flagellar transport protein FliP JO41_09480 IPR005838 Type III secretion system inner membrane P protein JO41_09485 IPR002191 Bacterial export protein family 3 JO41_09485 IPR006305 Flagellar biosynthesis protein FliQ JO41_09495 IPR006135 Type III secretion system substrate exporter JO41_09495 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB JO41_09495 IPR029025 Type III secretion system substrate exporter, C-terminal JO41_09500 IPR001712 Type III secretion system FHIPEP JO41_09500 IPR006301 Flagellar biosynthesis protein FlhA JO41_09505 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JO41_09505 IPR003593 AAA+ ATPase domain JO41_09505 IPR020006 Signal-recognition particle (SRP)-type GTPase JO41_09505 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09510 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JO41_09510 IPR025501 ATP binding protein MinD JO41_09510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09515 IPR029044 Nucleotide-diphospho-sugar transferases JO41_09520 IPR002528 Multi antimicrobial extrusion protein JO41_09530 IPR001900 JO41_09530 JO41_09530 IPR012340 Nucleic acid-binding, OB-fold JO41_09530 IPR036388 JO41_09530 JO41_09535 IPR001948 Peptidase M18 JO41_09535 IPR023358 Peptidase M18, domain 2 JO41_09540 IPR011990 Tetratricopeptide-like helical domain JO41_09540 IPR019734 Tetratricopeptide repeat JO41_09545 IPR003777 XdhC- CoxI JO41_09545 IPR027051 XdhC Rossmann domain JO41_09550 IPR003141 Polymerase/histidinol phosphatase, N-terminal JO41_09550 IPR004013 PHP, C-terminal JO41_09550 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JO41_09550 IPR004805 DNA polymerase III, alpha subunit JO41_09550 IPR011708 Bacterial DNA polymerase III, alpha subunit JO41_09550 IPR016195 Polymerase/histidinol phosphatase-like JO41_09550 IPR029460 DNA polymerase, helix-hairpin-helix motif JO41_09560 IPR001851 ABC transporter, permease JO41_09565 IPR003439 ABC transporter-like JO41_09565 IPR003593 AAA+ ATPase domain JO41_09565 IPR017871 ABC transporter, conserved site JO41_09565 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09570 IPR025997 Periplasmic binding protein domain JO41_09570 IPR028082 Periplasmic binding protein-like I JO41_09575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JO41_09575 IPR002300 Aminoacyl-tRNA synthetase, class Ia JO41_09575 IPR002303 Valine-tRNA ligase JO41_09575 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JO41_09575 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JO41_09575 IPR010978 tRNA-binding arm JO41_09575 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JO41_09575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_09575 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm JO41_09575 IPR037118 JO41_09575 JO41_09595 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_09600 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_09610 IPR007060 Septum formation initiator FtsL/DivIC JO41_09615 IPR006070 YrdC-like domain JO41_09615 IPR017945 DHBP synthase RibB-like alpha/beta domain JO41_09620 IPR002104 Integrase, catalytic JO41_09620 IPR004107 Integrase, SAM-like, N-terminal JO41_09620 IPR010998 Integrase, Lambda-type, N-terminal JO41_09620 IPR011010 DNA breaking-rejoining enzyme, catalytic core JO41_09620 IPR013762 Integrase-like, catalytic core JO41_09620 IPR023009 Tyrosine recombinase XerC/XerD JO41_09625 IPR003601 DNA topoisomerase, type IA, domain 2 JO41_09625 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JO41_09625 IPR005733 DNA topoisomerase I, bacterial-type JO41_09625 IPR006171 Toprim domain JO41_09625 IPR013497 DNA topoisomerase, type IA, central JO41_09625 IPR013498 DNA topoisomerase, type IA, zn finger JO41_09625 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JO41_09625 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JO41_09625 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JO41_09625 IPR023405 DNA topoisomerase, type IA, core domain JO41_09625 IPR023406 DNA topoisomerase, type IA, active site JO41_09625 IPR028612 DNA topoisomerase I, type IA JO41_09630 IPR003488 DNA recombination-mediator protein A JO41_09635 IPR011990 Tetratricopeptide-like helical domain JO41_09635 IPR013105 Tetratricopeptide TPR2 JO41_09635 IPR019734 Tetratricopeptide repeat JO41_09645 IPR006153 Cation/H+ exchanger JO41_09645 IPR038770 JO41_09645 JO41_09650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_09655 IPR000821 Alanine racemase JO41_09655 IPR001608 Alanine racemase, N-terminal JO41_09655 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JO41_09655 IPR011079 Alanine racemase, C-terminal JO41_09655 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site JO41_09655 IPR029066 PLP-binding barrel JO41_09660 IPR004923 Iron permease FTR1/Fip1/EfeU JO41_09665 IPR018470 Periplasmic metal-binding protein Tp34-type JO41_09665 IPR038482 JO41_09665 JO41_09670 IPR018758 Domain of unknown function DUF2318, membrane JO41_09675 IPR003838 Permease FtsX-like JO41_09675 IPR025857 MacB-like periplasmic core domain JO41_09680 IPR003838 Permease FtsX-like JO41_09680 IPR025857 MacB-like periplasmic core domain JO41_09685 IPR003439 ABC transporter-like JO41_09685 IPR003593 AAA+ ATPase domain JO41_09685 IPR017871 ABC transporter, conserved site JO41_09685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09690 IPR007329 FMN-binding JO41_09690 IPR017058 Major membrane immunogen, tpp15, predicted JO41_09695 IPR003838 Permease FtsX-like JO41_09695 IPR025857 MacB-like periplasmic core domain JO41_09700 IPR003439 ABC transporter-like JO41_09700 IPR003593 AAA+ ATPase domain JO41_09700 IPR017871 ABC transporter, conserved site JO41_09700 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09710 IPR032710 JO41_09710 JO41_09715 IPR000182 GNAT domain JO41_09715 IPR016181 Acyl-CoA N-acyltransferase JO41_09720 IPR013216 Methyltransferase type 11 JO41_09720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_09740 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_09740 IPR029033 Histidine phosphatase superfamily JO41_09750 IPR001387 Cro/C1-type helix-turn-helix domain JO41_09750 IPR010982 Lambda repressor-like, DNA-binding domain JO41_09755 IPR022742 Putative lysophospholipase JO41_09755 IPR029058 Alpha/Beta hydrolase fold JO41_09760 IPR003675 CAAX amino terminal protease JO41_09765 IPR009000 Translation protein, beta-barrel domain JO41_09765 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JO41_09765 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain JO41_09765 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JO41_09770 IPR003660 HAMP linker domain JO41_09770 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_09770 IPR004090 Chemotaxis methyl-accepting receptor JO41_09770 IPR033479 JO41_09770 JO41_09775 IPR012312 Haemerythrin/HHE cation-binding motif JO41_09775 IPR015077 Domain of unknown function DUF1858 JO41_09775 IPR035965 JO41_09775 JO41_09775 IPR038062 JO41_09775 JO41_09780 IPR001650 Helicase, C-terminal JO41_09780 IPR002121 HRDC domain JO41_09780 IPR004589 DNA helicase, ATP-dependent, RecQ type JO41_09780 IPR010997 HRDC-like JO41_09780 IPR011545 DEAD/DEAH box helicase domain JO41_09780 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_09780 IPR018982 RQC domain JO41_09780 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09780 IPR032284 JO41_09780 JO41_09780 IPR036388 JO41_09780 JO41_09780 IPR036390 JO41_09780 JO41_09785 IPR012507 YibE/F-like JO41_09790 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JO41_09790 IPR006179 5'-Nucleotidase/apyrase JO41_09790 IPR008334 5'-Nucleotidase, C-terminal JO41_09790 IPR029052 Metallo-dependent phosphatase-like JO41_09790 IPR036907 JO41_09790 JO41_09800 IPR000873 AMP-dependent synthetase/ligase JO41_09800 IPR020845 AMP-binding, conserved site JO41_09805 IPR001310 Histidine triad (HIT) protein JO41_09805 IPR019808 Histidine triad, conserved site JO41_09805 IPR036265 JO41_09805 JO41_09810 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase JO41_09810 IPR006204 GHMP kinase N-terminal domain JO41_09810 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_09810 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_09810 IPR036554 JO41_09810 JO41_09815 IPR007170 Stage V sporulation protein G JO41_09815 IPR036751 JO41_09815 JO41_09825 IPR001021 Ribosomal protein L25, long-form JO41_09825 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain JO41_09825 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain JO41_09825 IPR020057 Ribosomal protein L25, beta domain JO41_09825 IPR029751 Ribosomal protein L25 JO41_09825 IPR037121 JO41_09825 JO41_09830 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase JO41_09830 IPR012094 Lysidine-tRNA(Ile) synthetase JO41_09830 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal JO41_09830 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal JO41_09830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_09835 IPR011990 Tetratricopeptide-like helical domain JO41_09845 IPR002569 Peptide methionine sulphoxide reductase MsrA JO41_09845 IPR002579 Peptide methionine sulphoxide reductase MrsB JO41_09845 IPR011057 Mss4-like JO41_09845 IPR036509 JO41_09845 JO41_09850 IPR001107 Band 7 protein JO41_09855 IPR003660 HAMP linker domain JO41_09855 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_09855 IPR029151 Periplasmic sensor domain-like JO41_09855 IPR033479 JO41_09855 JO41_09860 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JO41_09860 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JO41_09860 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JO41_09860 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JO41_09860 IPR036291 JO41_09860 JO41_09865 IPR004445 Sodium/glutamate symporter JO41_09870 IPR005899 Sodium ion-translocating decarboxylase JO41_09875 IPR000089 Biotin/lipoyl attachment JO41_09875 IPR001882 Biotin-binding site JO41_09875 IPR011053 Single hybrid motif JO41_09880 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit JO41_09885 IPR004165 Coenzyme A transferase family I JO41_09885 IPR037171 JO41_09885 JO41_09890 IPR004165 Coenzyme A transferase family I JO41_09890 IPR037171 JO41_09890 JO41_09895 IPR029045 ClpP/crotonase-like domain JO41_09895 IPR034733 JO41_09895 JO41_09900 IPR004445 Sodium/glutamate symporter JO41_09905 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type JO41_09905 IPR008275 CoA enzyme activase JO41_09910 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component JO41_09915 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component JO41_09920 IPR026906 Leucine rich repeat 5 JO41_09920 IPR032675 JO41_09920 JO41_09925 IPR002481 Ferric-uptake regulator JO41_09925 IPR036388 JO41_09925 JO41_09925 IPR036390 JO41_09925 JO41_09940 IPR000086 NUDIX hydrolase domain JO41_09940 IPR015797 NUDIX hydrolase domain-like JO41_09940 IPR020084 NUDIX hydrolase, conserved site JO41_09940 IPR020476 NUDIX hydrolase JO41_09950 IPR008331 Ferritin/DPS protein domain JO41_09950 IPR009078 Ferritin-like superfamily JO41_09950 IPR012347 Ferritin-related JO41_09955 IPR003714 PhoH-like protein JO41_09955 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09960 IPR003607 HD/PDEase domain JO41_09960 IPR006674 HD domain JO41_09960 IPR006675 Uncharacterised domain HDIG JO41_09960 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain JO41_09960 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain JO41_09965 IPR002036 Endoribonuclease YbeY JO41_09965 IPR020549 Endoribonuclease YbeY, conserved site JO41_09965 IPR023091 Metalloprotease catalytic domain, predicted JO41_09970 IPR000644 CBS domain JO41_09970 IPR005170 Transporter-associated domain JO41_09970 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JO41_09970 IPR036318 JO41_09970 JO41_09975 IPR011990 Tetratricopeptide-like helical domain JO41_09975 IPR019734 Tetratricopeptide repeat JO41_09980 IPR001405 RadC protein JO41_09980 IPR020891 Uncharacterised protein family UPF0758, conserved site JO41_09980 IPR025657 RadC-like JAB domain JO41_09985 IPR017395 Chlorophyllase, chloroplast JO41_09985 IPR029058 Alpha/Beta hydrolase fold JO41_09990 IPR033469 JO41_09990 JO41_09995 IPR001279 Beta-lactamase-like JO41_09995 IPR016440 Rubredoxin-oxygen oxidoreductase JO41_09995 IPR029039 Flavoprotein-like JO41_09995 IPR036866 JO41_09995 JO41_10000 IPR002547 tRNA-binding domain JO41_10000 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal JO41_10000 IPR012340 Nucleic acid-binding, OB-fold JO41_10010 IPR000873 AMP-dependent synthetase/ligase JO41_10010 IPR020845 AMP-binding, conserved site JO41_10015 IPR003841 Sodium-dependent phosphate transport protein JO41_10015 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein JO41_10015 IPR026022 PhoU domain JO41_10015 IPR038078 JO41_10015 JO41_10020 IPR000121 PEP-utilising enzyme, C-terminal JO41_10020 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding JO41_10020 IPR008279 PEP-utilising enzyme, mobile domain JO41_10020 IPR010121 Pyruvate, phosphate dikinase JO41_10020 IPR013815 ATP-grasp fold, subdomain 1 JO41_10020 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JO41_10020 IPR018274 PEP-utilising enzyme, active site JO41_10020 IPR023151 PEP-utilising enzyme, conserved site JO41_10020 IPR036637 JO41_10020 JO41_10040 IPR003507 Muramoyl-tetrapeptide carboxypeptidase JO41_10040 IPR027461 LD-carboxypeptidase A, C-terminal domain JO41_10040 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain JO41_10040 IPR029062 Class I glutamine amidotransferase-like JO41_10050 IPR011989 Armadillo-like helical JO41_10050 IPR016024 Armadillo-type fold JO41_10055 IPR025645 Domain of unknown function DUF4349 JO41_10060 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase JO41_10060 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_10060 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_10060 IPR015424 Pyridoxal phosphate-dependent transferase JO41_10065 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain JO41_10065 IPR002320 Threonine-tRNA ligase, class IIa JO41_10065 IPR004154 Anticodon-binding JO41_10065 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JO41_10065 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain JO41_10065 IPR036621 JO41_10065 JO41_10070 IPR012460 Protein of unknown function DUF1667 JO41_10070 IPR036593 JO41_10070 JO41_10075 IPR001576 Phosphoglycerate kinase JO41_10075 IPR015824 Phosphoglycerate kinase, N-terminal JO41_10075 IPR015911 Phosphoglycerate kinase, conserved site JO41_10075 IPR036043 JO41_10075 JO41_10080 IPR006439 HAD hydrolase, subfamily IA JO41_10080 IPR023198 Phosphoglycolate phosphatase, domain 2 JO41_10080 IPR023214 HAD-like domain JO41_10080 IPR036412 JO41_10080 JO41_10105 IPR035196 JO41_10105 JO41_10110 IPR000780 MCP methyltransferase, CheR-type JO41_10110 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal JO41_10110 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JO41_10110 IPR026024 Chemotaxis protein methyltransferase CheR JO41_10110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_10110 IPR036804 JO41_10110 JO41_10115 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase JO41_10115 IPR001789 Signal transduction response regulator, receiver domain JO41_10115 IPR008248 Signal transduction response regulator, chemotaxis, CheB JO41_10115 IPR011006 CheY-like superfamily JO41_10115 IPR035909 JO41_10115 JO41_10120 IPR003795 Protein of unknown function DUF192 JO41_10120 IPR038695 JO41_10120 JO41_10130 IPR000595 Cyclic nucleotide-binding domain JO41_10130 IPR014710 RmlC-like jelly roll fold JO41_10130 IPR018488 Cyclic nucleotide-binding, conserved site JO41_10130 IPR018490 Cyclic nucleotide-binding-like JO41_10135 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase JO41_10135 IPR006094 FAD linked oxidase, N-terminal JO41_10135 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal JO41_10135 IPR016167 FAD-binding, type 2, subdomain 1 JO41_10135 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JO41_10135 IPR036318 JO41_10135 JO41_10135 IPR036635 JO41_10135 JO41_10145 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JO41_10145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10145 IPR015803 Cysteine-tRNA ligase JO41_10145 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase JO41_10145 IPR032678 JO41_10145 JO41_10150 IPR007627 RNA polymerase sigma-70 region 2 JO41_10150 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JO41_10150 IPR013324 RNA polymerase sigma factor, region 3/4 JO41_10150 IPR013325 RNA polymerase sigma factor, region 2 JO41_10150 IPR014284 RNA polymerase sigma-70 like domain JO41_10150 IPR036388 JO41_10150 JO41_10160 IPR002909 IPT domain JO41_10160 IPR002931 Transglutaminase-like JO41_10160 IPR013783 Immunoglobulin-like fold JO41_10160 IPR014756 Immunoglobulin E-set JO41_10160 IPR038765 JO41_10160 JO41_10165 IPR001048 Aspartate/glutamate/uridylate kinase JO41_10165 IPR011817 Uridylate kinase JO41_10165 IPR011818 Uridylate kinase, archaeal/spirochete, putative JO41_10165 IPR036393 JO41_10165 JO41_10170 IPR001623 DnaJ domain JO41_10170 IPR018253 DnaJ domain, conserved site JO41_10170 IPR036869 JO41_10170 JO41_10175 IPR004368 Translation initiation factor IF-1 JO41_10175 IPR006196 RNA-binding domain, S1, IF1 type JO41_10175 IPR012340 Nucleic acid-binding, OB-fold JO41_10175 IPR022967 RNA-binding domain, S1 JO41_10180 IPR000962 Zinc finger, DksA/TraR C4-type JO41_10180 IPR037187 JO41_10180 JO41_10185 IPR002818 ThiJ/PfpI JO41_10185 IPR029062 Class I glutamine amidotransferase-like JO41_10195 IPR000056 Ribulose-phosphate 3-epimerase-like JO41_10195 IPR011060 Ribulose-phosphate binding barrel JO41_10195 IPR013785 Aldolase-type TIM barrel JO41_10195 IPR026019 Ribulose-phosphate 3-epimerase JO41_10200 IPR011990 Tetratricopeptide-like helical domain JO41_10200 IPR019734 Tetratricopeptide repeat JO41_10210 IPR011990 Tetratricopeptide-like helical domain JO41_10210 IPR019734 Tetratricopeptide repeat JO41_10215 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type JO41_10215 IPR011005 Dihydropteroate synthase-like JO41_10215 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial JO41_10215 IPR036849 JO41_10215 JO41_10220 IPR011990 Tetratricopeptide-like helical domain JO41_10225 IPR003694 NAD(+) synthetase JO41_10225 IPR014445 Glutamine-dependent NAD(+) synthetase JO41_10225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10225 IPR022310 NAD/GMP synthase JO41_10225 IPR036526 JO41_10225 JO41_10230 IPR032816 JO41_10230 JO41_10235 IPR003148 Regulator of K+ conductance, N-terminal JO41_10235 IPR006037 Regulator of K+ conductance, C-terminal JO41_10235 IPR036291 JO41_10235 JO41_10235 IPR036721 JO41_10235 JO41_10245 IPR031599 JO41_10245 JO41_10250 IPR006073 GTP binding domain JO41_10250 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC JO41_10250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10255 IPR001672 Phosphoglucose isomerase (PGI) JO41_10255 IPR018189 Phosphoglucose isomerase, conserved site JO41_10255 IPR023096 Phosphoglucose isomerase, C-terminal JO41_10265 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JO41_10265 IPR010081 Diaminopropionate ammonia-lyase JO41_10265 IPR019871 Diaminopropionate ammonia-lyase, subgroup JO41_10265 IPR036052 JO41_10265 JO41_10280 IPR001279 Beta-lactamase-like JO41_10280 IPR011108 RNA-metabolising metallo-beta-lactamase JO41_10280 IPR022712 Beta-Casp domain JO41_10280 IPR036866 JO41_10280 JO41_10285 IPR001537 tRNA/rRNA methyltransferase, SpoU type JO41_10285 IPR004441 RNA methyltransferase TrmH family JO41_10285 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_10285 IPR029028 Alpha/beta knot methyltransferases JO41_10290 IPR001537 tRNA/rRNA methyltransferase, SpoU type JO41_10290 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JO41_10290 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_10290 IPR029028 Alpha/beta knot methyltransferases JO41_10290 IPR029064 50S ribosomal protein L30e-like JO41_10310 IPR002035 von Willebrand factor, type A JO41_10310 IPR036465 JO41_10310 JO41_10320 IPR002155 Thiolase JO41_10320 IPR016039 Thiolase-like JO41_10320 IPR020610 Thiolase, active site JO41_10320 IPR020613 Thiolase, conserved site JO41_10320 IPR020616 Thiolase, N-terminal JO41_10320 IPR020617 Thiolase, C-terminal JO41_10325 IPR009702 Protein of unknown function DUF1284 JO41_10330 IPR010106 Conserved hypothetical protein CHP01784 JO41_10335 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JO41_10335 IPR002547 tRNA-binding domain JO41_10335 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JO41_10335 IPR012340 Nucleic acid-binding, OB-fold JO41_10335 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JO41_10335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10335 IPR014758 Methionyl-tRNA synthetase JO41_10335 IPR015413 Methionyl/Leucyl tRNA synthetase JO41_10335 IPR023458 Methionine-tRNA ligase, type 1 JO41_10335 IPR029038 Methionyl-tRNA synthetase, Zn-domain JO41_10335 IPR033911 JO41_10335 JO41_10340 IPR003439 ABC transporter-like JO41_10340 IPR003593 AAA+ ATPase domain JO41_10340 IPR017871 ABC transporter, conserved site JO41_10340 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10345 IPR003339 ABC/ECF transporter, transmembrane component JO41_10350 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_10355 IPR009057 Homeodomain-like JO41_10355 IPR018060 DNA binding HTH domain, AraC-type JO41_10355 IPR018062 HTH domain AraC-type, conserved site JO41_10355 IPR020449 Transcription regulator HTH, AraC- type JO41_10360 IPR009057 Homeodomain-like JO41_10360 IPR018060 DNA binding HTH domain, AraC-type JO41_10360 IPR018062 HTH domain AraC-type, conserved site JO41_10360 IPR020449 Transcription regulator HTH, AraC- type JO41_10365 IPR003339 ABC/ECF transporter, transmembrane component JO41_10370 IPR003439 ABC transporter-like JO41_10370 IPR003593 AAA+ ATPase domain JO41_10370 IPR017871 ABC transporter, conserved site JO41_10370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10375 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_10380 IPR003439 ABC transporter-like JO41_10380 IPR003593 AAA+ ATPase domain JO41_10380 IPR011527 ABC transporter type 1, transmembrane domain JO41_10380 IPR017871 ABC transporter, conserved site JO41_10380 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10380 IPR036640 JO41_10380 JO41_10390 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_10390 IPR003356 DNA methylase, adenine-specific JO41_10390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_10400 IPR012337 Ribonuclease H-like domain JO41_10400 IPR029035 DHS-like NAD/FAD-binding domain JO41_10400 IPR036397 JO41_10400 JO41_10400 IPR039444 JO41_10400 JO41_10405 IPR004919 Domain of unknown function DUF262 JO41_10405 IPR011089 Domain of unknown function DUF1524 JO41_10410 IPR003439 ABC transporter-like JO41_10410 IPR003593 AAA+ ATPase domain JO41_10410 IPR011527 ABC transporter type 1, transmembrane domain JO41_10410 IPR017871 ABC transporter, conserved site JO41_10410 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10410 IPR036640 JO41_10410 JO41_10415 IPR001647 DNA-binding HTH domain, TetR-type JO41_10415 IPR009057 Homeodomain-like JO41_10420 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_10425 IPR003339 ABC/ECF transporter, transmembrane component JO41_10430 IPR003439 ABC transporter-like JO41_10430 IPR003593 AAA+ ATPase domain JO41_10430 IPR017871 ABC transporter, conserved site JO41_10430 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10435 IPR025357 Domain of unknown function DUF4261 JO41_10450 IPR011050 Pectin lyase fold/virulence factor JO41_10450 IPR012332 P22 tailspike C-terminal domain-like JO41_10475 IPR000594 UBA/THIF-type NAD/FAD binding fold JO41_10475 IPR035985 JO41_10475 JO41_10480 IPR000715 Glycosyl transferase, family 4 JO41_10480 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site JO41_10485 IPR002176 Crossover junction endodeoxyribonuclease RuvC JO41_10485 IPR012337 Ribonuclease H-like domain JO41_10485 IPR036397 JO41_10485 JO41_10490 IPR002716 PIN domain JO41_10490 IPR029060 PIN domain-like JO41_10495 IPR010985 Ribbon-helix-helix JO41_10500 IPR000587 Creatinase, N-terminal JO41_10500 IPR000994 Peptidase M24, structural domain JO41_10500 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JO41_10500 IPR032416 JO41_10500 JO41_10500 IPR036005 JO41_10500 JO41_10505 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JO41_10510 IPR001674 GMP synthase, C-terminal JO41_10510 IPR004739 GMP synthase, N-terminal JO41_10510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10510 IPR017926 Glutamine amidotransferase JO41_10510 IPR022310 NAD/GMP synthase JO41_10510 IPR022955 GMP synthase JO41_10510 IPR029062 Class I glutamine amidotransferase-like JO41_10515 IPR001270 ClpA/B family JO41_10515 IPR003593 AAA+ ATPase domain JO41_10515 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JO41_10515 IPR012763 DNA polymerase III, subunit gamma/ tau JO41_10515 IPR022754 DNA polymerase III, gamma subunit, domain III JO41_10515 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10530 IPR004401 Nucleoid-associated protein YbaB JO41_10530 IPR036894 JO41_10530 JO41_10535 IPR000093 DNA recombination protein RecR JO41_10535 IPR006171 Toprim domain JO41_10535 IPR015967 Recombination protein RecR, conserved site JO41_10535 IPR023627 Recombination protein RecR JO41_10535 IPR023628 Recombination protein RecR, C4-type zinc finger JO41_10545 IPR017853 Glycoside hydrolase, superfamily JO41_10560 IPR002346 Molybdopterin dehydrogenase, FAD-binding JO41_10560 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JO41_10560 IPR036318 JO41_10560 JO41_10565 IPR002888 [2Fe-2S]-binding JO41_10565 IPR012675 Beta-grasp domain JO41_10565 IPR036010 JO41_10565 JO41_10565 IPR036884 JO41_10565 JO41_10570 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_10570 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding JO41_10570 IPR036856 JO41_10570 JO41_10570 IPR037165 JO41_10570 JO41_10575 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_10575 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_10575 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_10575 IPR015424 Pyridoxal phosphate-dependent transferase JO41_10580 IPR001764 Glycoside hydrolase, family 3, N-terminal JO41_10580 IPR017853 Glycoside hydrolase, superfamily JO41_10580 IPR036881 JO41_10580 JO41_10580 IPR036962 JO41_10580 JO41_10585 IPR008302 Uncharacterised conserved protein UCP016719 JO41_10590 IPR011990 Tetratricopeptide-like helical domain JO41_10595 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JO41_10595 IPR036737 JO41_10595 JO41_10600 IPR008258 Lytic transglycosylase-like SLT domain JO41_10600 IPR018392 LysM domain JO41_10600 IPR023346 Lysozyme-like domain JO41_10600 IPR036779 JO41_10600 JO41_10605 IPR011990 Tetratricopeptide-like helical domain JO41_10605 IPR019734 Tetratricopeptide repeat JO41_10610 IPR036086 JO41_10610 JO41_10615 IPR003370 Chromate transporter JO41_10620 IPR003370 Chromate transporter JO41_10625 IPR002187 Nitrogen regulatory protein PII JO41_10625 IPR011322 Nitrogen regulatory PII-like, alpha/beta JO41_10625 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JO41_10630 IPR011435 Protein of unknown function DUF1538 JO41_10635 IPR002747 S-adenosyl-l-methionine hydroxide adenosyltransferase JO41_10635 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal JO41_10635 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal JO41_10645 IPR025540 Fluoroacetyl-CoA thioesterase JO41_10645 IPR029069 HotDog domain JO41_10650 IPR007438 Protein of unknown function DUF488 JO41_10655 IPR005358 Putative zinc- or iron-chelating domain containing protein JO41_10660 IPR001279 Beta-lactamase-like JO41_10660 IPR036866 JO41_10660 JO41_10670 IPR003770 Uncharacterised protein family UPF0755, YceG-like JO41_10675 IPR002694 Zinc finger, CHC2-type JO41_10675 IPR006171 Toprim domain JO41_10675 IPR006295 DNA primase, DnaG JO41_10675 IPR013264 DNA primase, catalytic core, N-terminal JO41_10675 IPR019475 DNA primase, DnaB-helicase binding domain JO41_10675 IPR030846 JO41_10675 JO41_10675 IPR036977 JO41_10675 JO41_10675 IPR037068 JO41_10675 JO41_10680 IPR000943 RNA polymerase sigma-70 JO41_10680 IPR007127 RNA polymerase sigma factor 70, region 1.1 JO41_10680 IPR007624 RNA polymerase sigma-70 region 3 JO41_10680 IPR007627 RNA polymerase sigma-70 region 2 JO41_10680 IPR007630 RNA polymerase sigma-70 region 4 JO41_10680 IPR009042 RNA polymerase sigma-70 region 1.2 JO41_10680 IPR012760 RNA polymerase sigma factor RpoD, C-terminal JO41_10680 IPR013324 RNA polymerase sigma factor, region 3/4 JO41_10680 IPR013325 RNA polymerase sigma factor, region 2 JO41_10680 IPR014284 RNA polymerase sigma-70 like domain JO41_10680 IPR028630 RNA polymerase sigma factor RpoD JO41_10680 IPR036388 JO41_10680 JO41_10685 IPR003743 Protein of unknown function DUF164 JO41_10695 IPR011990 Tetratricopeptide-like helical domain JO41_10695 IPR019734 Tetratricopeptide repeat JO41_10700 IPR004753 Cell shape determining protein MreB/Mrl JO41_10705 IPR007221 Rod shape-determining protein MreC JO41_10710 IPR007227 Cell shape-determining protein MreD JO41_10710 IPR017225 Cell shape-determining protein MreD, predicted JO41_10715 IPR001460 Penicillin-binding protein, transpeptidase JO41_10715 IPR005311 Penicillin-binding protein, dimerisation domain JO41_10715 IPR012338 Beta-lactamase/transpeptidase-like JO41_10715 IPR017790 Penicillin-binding protein 2 JO41_10715 IPR036138 JO41_10715 JO41_10720 IPR001182 Cell cycle protein FtsW/RodA JO41_10720 IPR011923 Rod shape-determining protein RodA JO41_10725 IPR019657 Late competence development protein ComFB JO41_10730 IPR000850 Adenylate kinase/UMP-CMP kinase JO41_10730 IPR006259 Adenylate kinase subfamily JO41_10730 IPR007862 Adenylate kinase, active site lid domain JO41_10730 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10730 IPR033690 JO41_10730 JO41_10735 IPR004520 tRNA modification GTPase MnmE JO41_10735 IPR005225 Small GTP-binding protein domain JO41_10735 IPR006073 GTP binding domain JO41_10735 IPR018948 GTP-binding protein TrmE, N-terminal JO41_10735 IPR025867 tRNA modification GTPase MnmE C-terminal domain JO41_10735 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 JO41_10735 IPR027368 tRNA modification GTPase MnmE domain 2 JO41_10735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10740 IPR003439 ABC transporter-like JO41_10740 IPR003593 AAA+ ATPase domain JO41_10740 IPR018247 EF-Hand 1, calcium-binding site JO41_10740 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10760 IPR007685 RelA/SpoT JO41_10765 IPR003439 ABC transporter-like JO41_10765 IPR003593 AAA+ ATPase domain JO41_10765 IPR011527 ABC transporter type 1, transmembrane domain JO41_10765 IPR017871 ABC transporter, conserved site JO41_10765 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10765 IPR036640 JO41_10765 JO41_10770 IPR000182 GNAT domain JO41_10770 IPR016181 Acyl-CoA N-acyltransferase JO41_10775 IPR003439 ABC transporter-like JO41_10775 IPR003593 AAA+ ATPase domain JO41_10775 IPR011527 ABC transporter type 1, transmembrane domain JO41_10775 IPR017871 ABC transporter, conserved site JO41_10775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10775 IPR036640 JO41_10775 JO41_10780 IPR001647 DNA-binding HTH domain, TetR-type JO41_10780 IPR009057 Homeodomain-like JO41_10780 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JO41_10790 IPR001647 DNA-binding HTH domain, TetR-type JO41_10790 IPR009057 Homeodomain-like JO41_10795 IPR012349 FMN-binding split barrel JO41_10810 IPR039261 JO41_10810 JO41_10815 IPR000462 CDP-alcohol phosphatidyltransferase JO41_10820 IPR001991 Sodium:dicarboxylate symporter JO41_10820 IPR036458 JO41_10820 JO41_10835 IPR005144 ATP-cone JO41_10835 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic JO41_10840 IPR003796 Ribonucleotide reductase regulator NrdR-like JO41_10840 IPR005144 ATP-cone JO41_10850 IPR001640 Prolipoprotein diacylglyceryl transferase JO41_10855 IPR005646 Protein of unknown function DUF342 JO41_10860 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JO41_10860 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10870 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JO41_10870 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JO41_10870 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JO41_10870 IPR036291 JO41_10870 JO41_10875 IPR001107 Band 7 protein JO41_10875 IPR010201 HflK JO41_10875 IPR036013 JO41_10875 JO41_10880 IPR001107 Band 7 protein JO41_10880 IPR010200 HflC JO41_10880 IPR036013 JO41_10880 JO41_10890 IPR004299 Membrane bound O-acyl transferase, MBOAT JO41_10890 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB JO41_10890 IPR028362 Alginate O-acetyltransferase AlgI JO41_10895 IPR007407 Protein of unknown function DUF459 JO41_10895 IPR036514 JO41_10895 JO41_10900 IPR002864 Acyl-ACP thioesterase JO41_10900 IPR029069 HotDog domain JO41_10905 IPR001737 Ribosomal RNA adenine methylase transferase JO41_10905 IPR011530 Ribosomal RNA adenine dimethylase JO41_10905 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site JO41_10905 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JO41_10905 IPR023165 rRNA adenine dimethylase-like JO41_10905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_10915 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_10915 IPR006225 Pseudouridine synthase, RluC/RluD JO41_10915 IPR020103 Pseudouridine synthase, catalytic domain JO41_10915 IPR036986 JO41_10915 JO41_10920 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JO41_10920 IPR020103 Pseudouridine synthase, catalytic domain JO41_10930 IPR024370 PBP domain JO41_10945 IPR006860 FecR protein JO41_10960 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase JO41_10960 IPR007890 CHASE2 JO41_10960 IPR029787 Nucleotide cyclase JO41_10965 IPR003439 ABC transporter-like JO41_10965 IPR003593 AAA+ ATPase domain JO41_10965 IPR011527 ABC transporter type 1, transmembrane domain JO41_10965 IPR017871 ABC transporter, conserved site JO41_10965 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10965 IPR036640 JO41_10965 JO41_10970 IPR003439 ABC transporter-like JO41_10970 IPR003593 AAA+ ATPase domain JO41_10970 IPR011527 ABC transporter type 1, transmembrane domain JO41_10970 IPR017871 ABC transporter, conserved site JO41_10970 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10970 IPR036640 JO41_10970 JO41_10975 IPR003439 ABC transporter-like JO41_10975 IPR003593 AAA+ ATPase domain JO41_10975 IPR008995 Molybdate/tungstate binding, C-terminal JO41_10975 IPR013611 Transport-associated OB, type 2 JO41_10975 IPR017871 ABC transporter, conserved site JO41_10975 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10985 IPR000620 Drug/metabolite transporter JO41_10995 IPR000182 GNAT domain JO41_10995 IPR016181 Acyl-CoA N-acyltransferase JO41_11000 IPR001098 DNA-directed DNA polymerase, family A, palm domain JO41_11000 IPR002298 DNA polymerase A JO41_11000 IPR002421 5'-3' exonuclease, N-terminal JO41_11000 IPR002562 3'-5' exonuclease domain JO41_11000 IPR008918 Helix-hairpin-helix motif, class 2 JO41_11000 IPR012337 Ribonuclease H-like domain JO41_11000 IPR018320 DNA polymerase 1 JO41_11000 IPR019760 DNA-directed DNA polymerase, family A, conserved site JO41_11000 IPR020045 5'-3' exonuclease, C-terminal domain JO41_11000 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal JO41_11000 IPR029060 PIN domain-like JO41_11000 IPR036279 JO41_11000 JO41_11000 IPR036397 JO41_11000 JO41_11005 IPR004468 CTP synthase JO41_11005 IPR017456 CTP synthase, N-terminal JO41_11005 IPR017926 Glutamine amidotransferase JO41_11005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11005 IPR029062 Class I glutamine amidotransferase-like JO41_11010 IPR002810 NfeD-like, C-terminal domain JO41_11015 IPR001107 Band 7 protein JO41_11015 IPR001972 Stomatin family JO41_11015 IPR018080 Band 7/stomatin-like, conserved site JO41_11015 IPR036013 JO41_11015 JO41_11020 IPR011042 Six-bladed beta-propeller, TolB-like JO41_11030 IPR004506 tRNA-specific 2-thiouridylase JO41_11030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_11030 IPR023382 Adenine nucleotide alpha hydrolase-like domains JO41_11040 IPR002637 Ham1-like protein JO41_11040 IPR020922 Non-canonical purine NTP pyrophosphatase JO41_11040 IPR029001 Inosine triphosphate pyrophosphatase-like JO41_11045 IPR003495 CobW/HypB/UreG domain JO41_11045 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase JO41_11045 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11050 IPR003439 ABC transporter-like JO41_11050 IPR003593 AAA+ ATPase domain JO41_11050 IPR017871 ABC transporter, conserved site JO41_11050 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11055 IPR003660 HAMP linker domain JO41_11055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_11055 IPR004090 Chemotaxis methyl-accepting receptor JO41_11055 IPR029151 Periplasmic sensor domain-like JO41_11055 IPR033479 JO41_11055 JO41_11060 IPR000873 AMP-dependent synthetase/ligase JO41_11065 IPR000064 Endopeptidase, NLPC/P60 domain JO41_11065 IPR038765 JO41_11065 JO41_11070 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal JO41_11070 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent JO41_11070 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JO41_11070 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal JO41_11070 IPR013328 Dehydrogenase, multihelical JO41_11070 IPR036291 JO41_11070 JO41_11075 IPR000415 Nitroreductase-like JO41_11075 IPR029479 Nitroreductase JO41_11080 IPR018711 Domain of unknown function DUF2233 JO41_11090 IPR000836 Phosphoribosyltransferase domain JO41_11090 IPR029057 Phosphoribosyltransferase-like JO41_11095 IPR011050 Pectin lyase fold/virulence factor JO41_11095 IPR012334 Pectin lyase fold JO41_11100 IPR012337 Ribonuclease H-like domain JO41_11100 IPR024567 Ribonuclease HII/HIII domain JO41_11100 IPR036397 JO41_11100 JO41_11110 IPR012349 FMN-binding split barrel JO41_11110 IPR024747 Pyridoxamine 5'-phosphate oxidase-related JO41_11120 IPR008670 Acyl-CoA reductase, LuxC JO41_11120 IPR016161 Aldehyde/histidinol dehydrogenase JO41_11125 IPR000595 Cyclic nucleotide-binding domain JO41_11125 IPR014710 RmlC-like jelly roll fold JO41_11125 IPR018490 Cyclic nucleotide-binding-like JO41_11130 IPR006674 HD domain JO41_11140 IPR003395 RecF/RecN/SMC, N-terminal JO41_11140 IPR003593 AAA+ ATPase domain JO41_11140 IPR004604 DNA recombination/repair protein RecN JO41_11140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11145 IPR002504 Inorganic polyphosphate/ATP-NAD kinase JO41_11145 IPR016064 ATP-NAD kinase-like domain JO41_11145 IPR017437 ATP-NAD kinase, PpnK-type, all-beta JO41_11145 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 JO41_11150 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_11150 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_11150 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_11150 IPR015424 Pyridoxal phosphate-dependent transferase JO41_11155 IPR002545 CheW-like protein JO41_11155 IPR036061 JO41_11155 JO41_11160 IPR002641 Patatin/Phospholipase A2-related JO41_11160 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JO41_11165 IPR024045 NusG, domain 2 JO41_11165 IPR038690 JO41_11165 JO41_11170 IPR007326 Lipoprotein-associated domain JO41_11175 IPR005532 Formylglycine-generating sulphatase enzyme domain JO41_11175 IPR016187 C-type lectin fold JO41_11180 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain JO41_11180 IPR002316 Proline-tRNA ligase, class IIa JO41_11180 IPR004154 Anticodon-binding JO41_11180 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type JO41_11180 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JO41_11180 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 JO41_11180 IPR036621 JO41_11180 JO41_11180 IPR036754 JO41_11180 JO41_11185 IPR024471 Protein of unknown function DUF2715 JO41_11190 IPR003697 Maf-like protein JO41_11190 IPR029001 Inosine triphosphate pyrophosphatase-like JO41_11195 IPR001865 Ribosomal protein S2 JO41_11195 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid JO41_11195 IPR018130 Ribosomal protein S2, conserved site JO41_11195 IPR023591 Ribosomal protein S2, flavodoxin-like domain JO41_11200 IPR001816 Translation elongation factor EFTs/EF1B JO41_11200 IPR009060 UBA-like JO41_11200 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation JO41_11200 IPR018101 Translation elongation factor Ts, conserved site JO41_11200 IPR036402 JO41_11200 JO41_11205 IPR002661 Ribosome recycling factor JO41_11205 IPR023584 Ribosome recycling factor domain JO41_11205 IPR036191 JO41_11205 JO41_11210 IPR001441 Decaprenyl diphosphate synthase-like JO41_11210 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site JO41_11210 IPR036424 JO41_11210 JO41_11220 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase JO41_11220 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal JO41_11220 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal JO41_11220 IPR026877 DXP reductoisomerase C-terminal domain JO41_11220 IPR036169 JO41_11220 JO41_11220 IPR036291 JO41_11220 JO41_11225 IPR001478 PDZ domain JO41_11225 IPR008915 Peptidase M50 JO41_11225 IPR036034 JO41_11225 JO41_11230 IPR025682 CpXC domain JO41_11235 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily JO41_11235 IPR015943 WD40/YVTN repeat-like-containing domain JO41_11240 IPR001647 DNA-binding HTH domain, TetR-type JO41_11240 IPR009057 Homeodomain-like JO41_11240 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JO41_11245 IPR004869 Membrane transport protein, MMPL domain JO41_11250 IPR033399 JO41_11250 JO41_11270 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_11270 IPR004090 Chemotaxis methyl-accepting receptor JO41_11270 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_11275 IPR005474 Transketolase, N-terminal JO41_11275 IPR005475 Transketolase-like, pyrimidine-binding domain JO41_11275 IPR005478 Transketolase, bacterial-like JO41_11275 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II JO41_11275 IPR020826 Transketolase binding site JO41_11275 IPR029061 Thiamin diphosphate-binding fold JO41_11280 IPR011703 ATPase, AAA-3 JO41_11280 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11290 IPR002035 von Willebrand factor, type A JO41_11290 IPR036465 JO41_11290 JO41_11295 IPR003607 HD/PDEase domain JO41_11295 IPR004095 TGS JO41_11295 IPR007685 RelA/SpoT JO41_11295 IPR012675 Beta-grasp domain JO41_11295 IPR012676 TGS-like JO41_11300 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JO41_11300 IPR004556 Modification methylase HemK JO41_11300 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific JO41_11300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_11305 IPR000352 Peptide chain release factor class I/class II JO41_11305 IPR004373 Peptide chain release factor 1 JO41_11305 IPR005139 Peptide chain release factor JO41_11310 IPR002110 Ankyrin repeat JO41_11310 IPR020683 Ankyrin repeat-containing domain JO41_11310 IPR036770 JO41_11310 JO41_11315 IPR006153 Cation/H+ exchanger JO41_11315 IPR038770 JO41_11315 JO41_11320 IPR032585 JO41_11320 JO41_11325 IPR004300 Glycoside hydrolase family 57, N-terminal domain JO41_11325 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JO41_11325 IPR015293 Domain of unknown function DUF1957 JO41_11325 IPR027291 Glycoside hydrolase 38/57, N-terminal domain JO41_11325 IPR028995 Glycoside hydrolase, families 57/38, central domain JO41_11325 IPR037090 JO41_11325 JO41_11330 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JO41_11330 IPR005952 Phosphoglycerate mutase 1 JO41_11330 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_11330 IPR029033 Histidine phosphatase superfamily JO41_11335 IPR004602 UvrABC system subunit A JO41_11335 IPR017871 ABC transporter, conserved site JO41_11335 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11345 IPR003439 ABC transporter-like JO41_11345 IPR003593 AAA+ ATPase domain JO41_11345 IPR017871 ABC transporter, conserved site JO41_11345 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11350 IPR005322 Peptidase C69, dipeptidase A JO41_11355 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JO41_11355 IPR036291 JO41_11355 JO41_11360 IPR006645 NusG, N-terminal JO41_11360 IPR008991 Translation protein SH3-like domain JO41_11360 IPR014722 Ribosomal protein L2 domain 2 JO41_11360 IPR036735 JO41_11360 JO41_11365 IPR003660 HAMP linker domain JO41_11365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_11370 IPR004776 Auxin efflux carrier JO41_11370 IPR038770 JO41_11370 JO41_11375 IPR004642 Serine dehydratase, alpha subunit JO41_11375 IPR005130 Serine dehydratase-like, alpha subunit JO41_11380 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit JO41_11380 IPR005131 Serine dehydratase beta chain JO41_11380 IPR029009 Allosteric substrate binding domain JO41_11385 IPR000652 Triosephosphate isomerase JO41_11385 IPR013785 Aldolase-type TIM barrel JO41_11385 IPR020861 Triosephosphate isomerase, active site JO41_11385 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic JO41_11385 IPR035990 JO41_11385 JO41_11395 IPR025877 MobA-like NTP transferase domain JO41_11395 IPR029044 Nucleotide-diphospho-sugar transferases JO41_11400 IPR003439 ABC transporter-like JO41_11400 IPR003593 AAA+ ATPase domain JO41_11400 IPR017871 ABC transporter, conserved site JO41_11400 IPR018449 NIL domain JO41_11400 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11405 IPR000515 MetI-like domain JO41_11405 IPR035906 JO41_11405 JO41_11415 IPR002933 Peptidase M20 JO41_11415 IPR011650 Peptidase M20, dimerisation domain JO41_11415 IPR017439 Amidohydrolase JO41_11415 IPR036264 JO41_11415 JO41_11435 IPR008201 Protein of unknown function DUF86 JO41_11440 IPR002934 Nucleotidyl transferase domain JO41_11445 IPR003447 FemABX peptidyl transferase JO41_11445 IPR016181 Acyl-CoA N-acyltransferase JO41_11450 IPR011004 Trimeric LpxA-like JO41_11450 IPR032533 JO41_11450 JO41_11455 IPR033399 JO41_11455 JO41_11460 IPR003838 Permease FtsX-like JO41_11460 IPR025857 MacB-like periplasmic core domain JO41_11465 IPR003838 Permease FtsX-like JO41_11470 IPR003439 ABC transporter-like JO41_11470 IPR003593 AAA+ ATPase domain JO41_11470 IPR017871 ABC transporter, conserved site JO41_11470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11480 IPR000090 Flagellar motor switch protein FliG JO41_11480 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO41_11480 IPR023087 JO41_11480 JO41_11480 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JO41_11480 IPR032779 JO41_11480 JO41_11485 IPR007863 Peptidase M16, C-terminal domain JO41_11485 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JO41_11485 IPR011765 Peptidase M16, N-terminal JO41_11485 IPR013578 Peptidase M16C associated JO41_11490 IPR000565 DNA topoisomerase, type IIA, subunit B JO41_11490 IPR001241 DNA topoisomerase, type IIA JO41_11490 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_11490 IPR006171 Toprim domain JO41_11490 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JO41_11490 IPR013759 DNA topoisomerase, type IIA, central domain JO41_11490 IPR013760 DNA topoisomerase, type IIA-like domain JO41_11490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_11490 IPR018522 DNA topoisomerase, type IIA, conserved site JO41_11490 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_11490 IPR036890 JO41_11490 JO41_11495 IPR002933 Peptidase M20 JO41_11495 IPR011650 Peptidase M20, dimerisation domain JO41_11495 IPR036264 JO41_11495 JO41_11500 IPR003739 Lysine-2,3-aminomutase family JO41_11500 IPR013785 Aldolase-type TIM barrel JO41_11505 IPR001599 Alpha-2-macroglobulin JO41_11505 IPR002890 Alpha-2-macroglobulin, N-terminal JO41_11505 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid JO41_11505 IPR011625 Alpha-2-macroglobulin, N-terminal 2 JO41_11505 IPR013783 Immunoglobulin-like fold JO41_11505 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming JO41_11520 IPR019239 Protein of unknown function DUF2191 JO41_11530 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase JO41_11530 IPR023509 D-Tyr tRNAtyr deacylase-like domain JO41_11535 IPR001328 Peptidyl-tRNA hydrolase JO41_11535 IPR018171 Peptidyl-tRNA hydrolase, conserved site JO41_11535 IPR036416 JO41_11535 JO41_11540 IPR003593 AAA+ ATPase domain JO41_11540 IPR013765 DNA recombination and repair protein RecA JO41_11540 IPR020584 DNA recombination/repair protein RecA, conserved site JO41_11540 IPR023400 DNA recombination and repair protein RecA, C-terminal JO41_11540 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11550 IPR003439 ABC transporter-like JO41_11550 IPR003593 AAA+ ATPase domain JO41_11550 IPR017871 ABC transporter, conserved site JO41_11550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11555 IPR025531 Protein of unknown function DUF4418 JO41_11565 IPR006837 Protein of unknown function DUF610, YibQ JO41_11565 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JO41_11570 IPR000905 Gcp-like domain JO41_11570 IPR017861 Kae1/YgjD family JO41_11570 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD JO41_11575 IPR013196 Helix-turn-helix, type 11 JO41_11575 IPR026881 WYL domain JO41_11575 IPR036388 JO41_11575 JO41_11590 IPR032774 JO41_11590 JO41_11605 IPR026906 Leucine rich repeat 5 JO41_11605 IPR032675 JO41_11605 JO41_11610 IPR003593 AAA+ ATPase domain JO41_11610 IPR003959 ATPase, AAA-type, core JO41_11610 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11625 IPR003439 ABC transporter-like JO41_11625 IPR003593 AAA+ ATPase domain JO41_11625 IPR011527 ABC transporter type 1, transmembrane domain JO41_11625 IPR017871 ABC transporter, conserved site JO41_11625 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11625 IPR036640 JO41_11625 JO41_11630 IPR009057 Homeodomain-like JO41_11630 IPR018060 DNA binding HTH domain, AraC-type JO41_11635 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_11640 IPR003339 ABC/ECF transporter, transmembrane component JO41_11645 IPR003439 ABC transporter-like JO41_11645 IPR003593 AAA+ ATPase domain JO41_11645 IPR017871 ABC transporter, conserved site JO41_11645 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11650 IPR001991 Sodium:dicarboxylate symporter JO41_11650 IPR036458 JO41_11650 JO41_11655 IPR005130 Serine dehydratase-like, alpha subunit JO41_11655 IPR021144 Uncharacterised protein family UPF0597 JO41_11660 IPR006680 Amidohydrolase 1 JO41_11660 IPR011059 Metal-dependent hydrolase, composite domain JO41_11660 IPR011778 Hydantoinase/dihydropyrimidinase JO41_11660 IPR032466 JO41_11660 JO41_11665 IPR001845 HTH ArsR-type DNA-binding domain JO41_11665 IPR036388 JO41_11665 JO41_11665 IPR036390 JO41_11665 JO41_11675 IPR000522 ABC transporter, permease protein JO41_11675 IPR037294 JO41_11675 JO41_11690 IPR003439 ABC transporter-like JO41_11690 IPR003593 AAA+ ATPase domain JO41_11690 IPR011527 ABC transporter type 1, transmembrane domain JO41_11690 IPR017871 ABC transporter, conserved site JO41_11690 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11690 IPR036640 JO41_11690 JO41_11695 IPR007621 TPM domain JO41_11700 IPR007156 LemA JO41_11700 IPR023353 LemA-like domain JO41_11705 IPR001647 DNA-binding HTH domain, TetR-type JO41_11705 IPR009057 Homeodomain-like JO41_11715 IPR003439 ABC transporter-like JO41_11715 IPR003593 AAA+ ATPase domain JO41_11715 IPR011527 ABC transporter type 1, transmembrane domain JO41_11715 IPR017871 ABC transporter, conserved site JO41_11715 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11715 IPR036640 JO41_11715 JO41_11720 IPR003439 ABC transporter-like JO41_11720 IPR003593 AAA+ ATPase domain JO41_11720 IPR011527 ABC transporter type 1, transmembrane domain JO41_11720 IPR017871 ABC transporter, conserved site JO41_11720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11720 IPR036640 JO41_11720 JO41_11725 IPR000524 Transcription regulator HTH, GntR JO41_11725 IPR008920 Transcription regulator FadR/GntR, C-terminal JO41_11725 IPR011711 GntR, C-terminal JO41_11725 IPR036388 JO41_11725 JO41_11725 IPR036390 JO41_11725 JO41_11730 IPR000085 Bacterial DNA recombination protein RuvA JO41_11730 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JO41_11730 IPR010994 RuvA domain 2-like JO41_11730 IPR012340 Nucleic acid-binding, OB-fold JO41_11730 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial JO41_11730 IPR036267 JO41_11730 JO41_11735 IPR001498 Impact, N-terminal JO41_11735 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_11735 IPR035647 JO41_11735 JO41_11735 IPR036956 JO41_11735 JO41_11740 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase JO41_11740 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JO41_11740 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JO41_11740 IPR036291 JO41_11740 JO41_11745 IPR004276 Glycosyl transferase, family 28 JO41_11745 IPR006009 N-acetylglucosaminyltransferase, MurG JO41_11745 IPR007235 Glycosyl transferase, family 28, C-terminal JO41_11750 IPR003825 Colicin V production, CvpA JO41_11755 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11760 IPR029787 Nucleotide cyclase JO41_11765 IPR019079 Capsule synthesis protein, CapA JO41_11770 IPR003593 AAA+ ATPase domain JO41_11770 IPR007692 DNA helicase, DnaB type JO41_11770 IPR007693 DNA helicase, DnaB-like, N-terminal JO41_11770 IPR007694 DNA helicase, DnaB-like, C-terminal JO41_11770 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JO41_11770 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11770 IPR036185 JO41_11770 JO41_11775 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JO41_11775 IPR020069 Ribosomal protein L9, C-terminal JO41_11775 IPR020070 Ribosomal protein L9, N-terminal JO41_11775 IPR020594 Ribosomal protein L9, bacteria/chloroplast JO41_11775 IPR036791 JO41_11775 JO41_11775 IPR036935 JO41_11775 JO41_11780 IPR001648 Ribosomal protein S18 JO41_11780 IPR018275 Ribosomal protein S18, conserved site JO41_11780 IPR036870 JO41_11780 JO41_11785 IPR000424 Primosome PriB/single-strand DNA-binding JO41_11785 IPR011344 Single-stranded DNA-binding protein JO41_11785 IPR012340 Nucleic acid-binding, OB-fold JO41_11790 IPR000529 Ribosomal protein S6 JO41_11790 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JO41_11790 IPR020814 Ribosomal protein S6, plastid/chloroplast JO41_11790 IPR035980 JO41_11790 JO41_11795 IPR003495 CobW/HypB/UreG domain JO41_11795 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JO41_11795 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11800 IPR002528 Multi antimicrobial extrusion protein JO41_11805 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase JO41_11805 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_11805 IPR029787 Nucleotide cyclase JO41_11810 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase JO41_11810 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_11810 IPR029787 Nucleotide cyclase JO41_11815 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase JO41_11820 IPR000192 Aminotransferase class V domain JO41_11820 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_11820 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_11820 IPR015424 Pyridoxal phosphate-dependent transferase JO41_11820 IPR016454 Cysteine desulfurase, NifS JO41_11825 IPR030960 JO41_11825 JO41_11825 IPR030963 JO41_11825 JO41_11830 IPR004300 Glycoside hydrolase family 57, N-terminal domain JO41_11830 IPR011013 Galactose mutarotase-like domain JO41_11830 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JO41_11830 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup JO41_11830 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal JO41_11835 IPR000642 Peptidase M41 JO41_11835 IPR003593 AAA+ ATPase domain JO41_11835 IPR003959 ATPase, AAA-type, core JO41_11835 IPR003960 ATPase, AAA-type, conserved site JO41_11835 IPR005936 Peptidase, FtsH JO41_11835 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11835 IPR037219 JO41_11835 JO41_11840 IPR001932 Protein phosphatase 2C (PP2C)-like domain JO41_11840 IPR003018 GAF domain JO41_11840 IPR029016 GAF domain-like JO41_11840 IPR036457 JO41_11840 JO41_11845 IPR002645 STAS domain JO41_11845 IPR003658 Anti-sigma factor antagonist JO41_11845 IPR036513 JO41_11845 JO41_11850 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_11850 IPR036890 JO41_11850 JO41_11875 IPR002524 Cation efflux protein JO41_11875 IPR027469 Cation efflux protein transmembrane domain JO41_11875 IPR027470 Cation efflux protein cytoplasmic domain JO41_11875 IPR036837 JO41_11875 JO41_11880 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase JO41_11880 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_11880 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_11880 IPR015424 Pyridoxal phosphate-dependent transferase JO41_11880 IPR023603 Threonine aldolase JO41_11885 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain JO41_11885 IPR022687 Iron dependent repressor, N-terminal JO41_11885 IPR022689 Iron dependent repressor, diptheria toxin type JO41_11885 IPR036388 JO41_11885 JO41_11885 IPR036390 JO41_11885 JO41_11885 IPR036421 JO41_11885 JO41_11890 IPR006127 Periplasmic solute binding protein family JO41_11890 IPR006128 Adhesion lipoprotein JO41_11890 IPR006129 Adhesin B JO41_11895 IPR003439 ABC transporter-like JO41_11895 IPR003593 AAA+ ATPase domain JO41_11895 IPR017871 ABC transporter, conserved site JO41_11895 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11905 IPR001626 ABC-3 JO41_11905 IPR037294 JO41_11905 JO41_11915 IPR001626 ABC-3 JO41_11915 IPR037294 JO41_11915 JO41_11920 IPR007553 Domain of unknown function DUF523 JO41_11930 IPR001270 ClpA/B family JO41_11930 IPR001943 UVR domain JO41_11930 IPR003593 AAA+ ATPase domain JO41_11930 IPR003959 ATPase, AAA-type, core JO41_11930 IPR004176 Clp, N-terminal JO41_11930 IPR018368 ClpA/B, conserved site 1 JO41_11930 IPR019489 Clp ATPase, C-terminal JO41_11930 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11930 IPR036628 JO41_11930 JO41_11935 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JO41_11935 IPR022414 ATP:guanido phosphotransferase, catalytic domain JO41_11940 IPR001943 UVR domain JO41_11940 IPR025542 YacH protein JO41_11940 IPR036876 JO41_11940 JO41_11945 IPR000014 PAS domain JO41_11945 IPR002078 RNA polymerase sigma factor 54 interaction domain JO41_11945 IPR003593 AAA+ ATPase domain JO41_11945 IPR009057 Homeodomain-like JO41_11945 IPR013767 PAS fold JO41_11945 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO41_11945 IPR025944 Sigma-54 interaction domain, conserved site JO41_11945 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11945 IPR035965 JO41_11945 JO41_11950 IPR005170 Transporter-associated domain JO41_11950 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JO41_11950 IPR036318 JO41_11950 JO41_11955 IPR000014 PAS domain JO41_11955 IPR003594 Histidine kinase-like ATPase, C-terminal domain JO41_11955 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JO41_11955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JO41_11955 IPR013767 PAS fold JO41_11955 IPR035965 JO41_11955 JO41_11955 IPR036097 JO41_11955 JO41_11955 IPR036890 JO41_11955 JO41_11960 IPR001789 Signal transduction response regulator, receiver domain JO41_11960 IPR002078 RNA polymerase sigma factor 54 interaction domain JO41_11960 IPR002197 DNA binding HTH domain, Fis-type JO41_11960 IPR003593 AAA+ ATPase domain JO41_11960 IPR009057 Homeodomain-like JO41_11960 IPR011006 CheY-like superfamily JO41_11960 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO41_11960 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JO41_11960 IPR025944 Sigma-54 interaction domain, conserved site JO41_11960 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11970 IPR023198 Phosphoglycolate phosphatase, domain 2 JO41_11970 IPR023214 HAD-like domain JO41_11970 IPR036412 JO41_11970 JO41_11975 IPR007730 Sporulation-related domain JO41_11975 IPR036680 JO41_11975 JO41_11985 IPR007534 Acyl-protein synthetase, LuxE JO41_11990 IPR001279 Beta-lactamase-like JO41_11990 IPR036866 JO41_11990 JO41_11995 IPR036736 JO41_11995 JO41_12000 IPR003702 Acetyl-CoA hydrolase/transferase JO41_12000 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain JO41_12000 IPR037171 JO41_12000 JO41_12000 IPR038460 JO41_12000 JO41_12005 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JO41_12005 IPR029069 HotDog domain JO41_12010 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal JO41_12010 IPR034904 JO41_12010 JO41_12025 IPR004925 HpaB/PvcC/4-BUDH JO41_12025 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JO41_12025 IPR024674 HpaB/PvcC/4-BUDH N-terminal JO41_12025 IPR024719 HpaB/PvcC/4-BUDH C-terminal JO41_12025 IPR036250 JO41_12025 JO41_12035 IPR007167 Ferrous iron transporter FeoA domain JO41_12035 IPR008988 Transcriptional repressor, C-terminal JO41_12035 IPR038157 JO41_12035 JO41_12040 IPR001670 Alcohol dehydrogenase, iron-type JO41_12045 IPR005122 Uracil-DNA glycosylase-like JO41_12045 IPR026353 Hypoxanthine-DNA glycosylase JO41_12045 IPR036895 JO41_12045 JO41_12055 IPR004808 AP endonuclease 1 JO41_12055 IPR005135 Endonuclease/exonuclease/phosphatase JO41_12055 IPR020847 AP endonuclease 1, binding site JO41_12055 IPR020848 AP endonuclease 1, conserved site JO41_12055 IPR036691 JO41_12055 JO41_12065 IPR007401 Protein of unknown function DUF454 JO41_12070 IPR003439 ABC transporter-like JO41_12070 IPR003593 AAA+ ATPase domain JO41_12070 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12070 IPR030921 JO41_12070 JO41_12075 IPR005653 Organic solvent tolerance-like, N-terminal JO41_12080 IPR001757 Cation-transporting P-type ATPase JO41_12080 IPR006121 Heavy metal-associated domain, HMA JO41_12080 IPR006122 Heavy metal-associated domain, copper ion-binding JO41_12080 IPR008250 P-type ATPase, A domain JO41_12080 IPR017969 Heavy-metal-associated, conserved site JO41_12080 IPR018303 P-type ATPase, phosphorylation site JO41_12080 IPR023214 HAD-like domain JO41_12080 IPR023298 P-type ATPase, transmembrane domain JO41_12080 IPR023299 P-type ATPase, cytoplasmic domain N JO41_12080 IPR027256 Cation-transporting P-type ATPase, subfamily IB JO41_12080 IPR036163 JO41_12080 JO41_12080 IPR036412 JO41_12080 JO41_12095 IPR010106 Conserved hypothetical protein CHP01784 JO41_12100 IPR006680 Amidohydrolase 1 JO41_12100 IPR011059 Metal-dependent hydrolase, composite domain JO41_12100 IPR017700 Putative selenium metabolism protein SsnA JO41_12100 IPR032466 JO41_12100 JO41_12105 IPR000801 Putative esterase JO41_12105 IPR029058 Alpha/Beta hydrolase fold JO41_12110 IPR002491 ABC transporter periplasmic binding domain JO41_12115 IPR003439 ABC transporter-like JO41_12115 IPR003593 AAA+ ATPase domain JO41_12115 IPR017871 ABC transporter, conserved site JO41_12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12125 IPR025874 Double zinc ribbon JO41_12125 IPR033880 JO41_12125 JO41_12135 IPR007621 TPM domain JO41_12140 IPR003682 rRNA small subunit methyltransferase G JO41_12140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_12145 IPR003142 Biotin protein ligase, C-terminal JO41_12145 IPR004143 Biotin/lipoate A/B protein ligase JO41_12145 IPR004408 Biotin--acetyl-CoA-carboxylase ligase JO41_12150 IPR006054 DNA polymerase III, epsilon subunit JO41_12150 IPR012337 Ribonuclease H-like domain JO41_12150 IPR013520 Exonuclease, RNase T/DNA polymerase III JO41_12150 IPR036397 JO41_12150 JO41_12155 IPR005841 Alpha-D-phosphohexomutase superfamily JO41_12155 IPR005843 Alpha-D-phosphohexomutase, C-terminal JO41_12155 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JO41_12155 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JO41_12155 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JO41_12155 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JO41_12155 IPR016066 Alpha-D-phosphohexomutase, conserved site JO41_12155 IPR036900 JO41_12155 JO41_12165 IPR001264 Glycosyl transferase, family 51 JO41_12165 IPR001460 Penicillin-binding protein, transpeptidase JO41_12165 IPR012338 Beta-lactamase/transpeptidase-like JO41_12165 IPR023346 Lysozyme-like domain JO41_12165 IPR036950 JO41_12165 JO41_12170 IPR002125 CMP/dCMP deaminase, zinc-binding JO41_12170 IPR016192 APOBEC/CMP deaminase, zinc-binding JO41_12170 IPR016193 Cytidine deaminase-like JO41_12170 IPR016473 Deoxycytidylate deaminase JO41_12175 IPR029144 Threonine synthase, N-terminal JO41_12175 IPR036052 JO41_12175 JO41_12175 IPR037158 JO41_12175 JO41_12180 IPR032675 JO41_12180 JO41_12185 IPR011990 Tetratricopeptide-like helical domain JO41_12185 IPR019734 Tetratricopeptide repeat JO41_12190 IPR001986 Enolpyruvate transferase domain JO41_12190 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase JO41_12190 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JO41_12190 IPR036968 JO41_12190 JO41_12195 IPR000175 Sodium:neurotransmitter symporter JO41_12195 IPR037272 JO41_12195 JO41_12200 IPR002937 Amine oxidase JO41_12200 IPR014105 Phytoene desaturase CrtI family JO41_12200 IPR036188 JO41_12200 JO41_12205 IPR008949 Terpenoid synthase JO41_12205 IPR019845 Squalene/phytoene synthase, conserved site JO41_12210 IPR002794 Protein of unknown function DUF92, TMEM19 JO41_12215 IPR003395 RecF/RecN/SMC, N-terminal JO41_12215 IPR011890 Structural maintenance of chromosomes protein, prokaryotic JO41_12215 IPR024704 Structural maintenance of chromosomes protein JO41_12215 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12225 IPR011990 Tetratricopeptide-like helical domain JO41_12230 IPR005580 DbpA, RNA-binding JO41_12230 IPR012677 Nucleotide-binding, alpha-beta plait JO41_12230 IPR035979 JO41_12230 JO41_12240 IPR000523 Magnesium chelatase, ChlI subunit JO41_12240 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_12240 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_12240 IPR025158 Mg chelatase-related protein, C-terminal domain JO41_12240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12245 IPR001264 Glycosyl transferase, family 51 JO41_12245 IPR001460 Penicillin-binding protein, transpeptidase JO41_12245 IPR009647 Penicillin-binding, C-terminal JO41_12245 IPR011815 Penicillin-binding protein 1C JO41_12245 IPR012338 Beta-lactamase/transpeptidase-like JO41_12245 IPR023346 Lysozyme-like domain JO41_12245 IPR036950 JO41_12245 JO41_12250 IPR025420 Domain of unknown function DUF4143 JO41_12250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12260 IPR025368 Protein of unknown function DUF4272 JO41_12265 IPR025335 Protein of unknown function DUF4241 JO41_12275 IPR018546 Protein of unknown function DUF2004 JO41_12290 IPR032675 JO41_12290 JO41_12305 IPR029088 Immunity protein 8 JO41_12310 IPR016024 Armadillo-type fold JO41_12315 IPR011990 Tetratricopeptide-like helical domain JO41_12315 IPR019734 Tetratricopeptide repeat JO41_12325 IPR016024 Armadillo-type fold JO41_12330 IPR035948 JO41_12330 JO41_12350 IPR002931 Transglutaminase-like JO41_12350 IPR038765 JO41_12350 JO41_12360 IPR003812 Fido domain JO41_12360 IPR036597 JO41_12360 JO41_12365 IPR002110 Ankyrin repeat JO41_12365 IPR020683 Ankyrin repeat-containing domain JO41_12365 IPR036770 JO41_12365 JO41_12375 IPR019260 Domain of unknown function DUF2262 JO41_12375 IPR024198 Uncharacterised conserved protein, UCP033642 JO41_12430 IPR000182 GNAT domain JO41_12430 IPR016181 Acyl-CoA N-acyltransferase JO41_12455 IPR002110 Ankyrin repeat JO41_12455 IPR020683 Ankyrin repeat-containing domain JO41_12455 IPR036770 JO41_12455 JO41_12485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JO41_12490 IPR000640 Translation elongation factor EFG, V domain JO41_12490 IPR000795 Elongation factor, GTP-binding domain JO41_12490 IPR005225 Small GTP-binding protein domain JO41_12490 IPR005517 Translation elongation factor EFG/EF2, domain IV JO41_12490 IPR009000 Translation protein, beta-barrel domain JO41_12490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_12490 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_12490 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12490 IPR035647 JO41_12490 JO41_12495 IPR002877 Ribosomal RNA methyltransferase FtsJ domain JO41_12495 IPR015507 Ribosomal RNA large subunit methyltransferase E JO41_12495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_12505 IPR003838 Permease FtsX-like JO41_12505 IPR025857 MacB-like periplasmic core domain JO41_12510 IPR003439 ABC transporter-like JO41_12510 IPR003593 AAA+ ATPase domain JO41_12510 IPR017871 ABC transporter, conserved site JO41_12510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12515 IPR003838 Permease FtsX-like JO41_12515 IPR025857 MacB-like periplasmic core domain JO41_12525 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JO41_12525 IPR003593 AAA+ ATPase domain JO41_12525 IPR004390 Signal-recognition particle receptor FtsY JO41_12525 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle JO41_12525 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12525 IPR036225 JO41_12525 JO41_12530 IPR013229 PEGA JO41_12535 IPR000352 Peptide chain release factor class I/class II JO41_12535 IPR004374 Peptide chain release factor 2 JO41_12535 IPR005139 Peptide chain release factor JO41_12540 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 JO41_12540 IPR021127 CRISPR associated protein Cas2 JO41_12550 IPR003439 ABC transporter-like JO41_12550 IPR003593 AAA+ ATPase domain JO41_12550 IPR017871 ABC transporter, conserved site JO41_12550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12555 IPR003784 BioY protein JO41_12565 IPR001763 Rhodanese-like domain JO41_12565 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JO41_12565 IPR016156 FAD/NAD-linked reductase, dimerisation domain JO41_12565 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JO41_12565 IPR036188 JO41_12565 JO41_12565 IPR036873 JO41_12565 JO41_12570 IPR003709 Peptidase M15B/M15C JO41_12570 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain JO41_12580 IPR002645 STAS domain JO41_12580 IPR003658 Anti-sigma factor antagonist JO41_12580 IPR036513 JO41_12580 JO41_12585 IPR001932 Protein phosphatase 2C (PP2C)-like domain JO41_12585 IPR036457 JO41_12585 JO41_12590 IPR001932 Protein phosphatase 2C (PP2C)-like domain JO41_12590 IPR036457 JO41_12590 JO41_12595 IPR000914 Bacterial extracellular solute-binding protein, family 5 JO41_12595 IPR030678 JO41_12595 JO41_12600 IPR000515 MetI-like domain JO41_12600 IPR035906 JO41_12600 JO41_12605 IPR000515 MetI-like domain JO41_12605 IPR035906 JO41_12605 JO41_12610 IPR003439 ABC transporter-like JO41_12610 IPR003593 AAA+ ATPase domain JO41_12610 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JO41_12610 IPR017871 ABC transporter, conserved site JO41_12610 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12615 IPR003439 ABC transporter-like JO41_12615 IPR003593 AAA+ ATPase domain JO41_12615 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JO41_12615 IPR017871 ABC transporter, conserved site JO41_12615 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12620 IPR000150 Cof protein JO41_12620 IPR006379 HAD-superfamily hydrolase, subfamily IIB JO41_12620 IPR023214 HAD-like domain JO41_12620 IPR036412 JO41_12620 JO41_12625 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JO41_12625 IPR004839 Aminotransferase, class I/classII JO41_12625 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JO41_12625 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JO41_12625 IPR015424 Pyridoxal phosphate-dependent transferase JO41_12630 IPR011008 Dimeric alpha-beta barrel JO41_12630 IPR019887 Transcription regulator AsnC-type, C-terminal JO41_12630 IPR019888 Transcription regulator AsnC-type JO41_12630 IPR036388 JO41_12630 JO41_12630 IPR036390 JO41_12630 JO41_12640 IPR001406 Pseudouridine synthase I, TruA JO41_12640 IPR020095 Pseudouridine synthase I, TruA, C-terminal JO41_12640 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain JO41_12640 IPR020103 Pseudouridine synthase, catalytic domain JO41_12645 IPR018708 Protein of unknown function DUF2225 JO41_12650 IPR002582 Holo-[acyl carrier protein] synthase JO41_12650 IPR004568 Phosphopantethiene-protein transferase domain JO41_12650 IPR008278 4'-phosphopantetheinyl transferase superfamily JO41_12650 IPR037143 JO41_12650 JO41_12655 IPR012505 YbbR-like JO41_12660 IPR003390 DNA integrity scanning protein, DisA, N-terminal JO41_12660 IPR014046 Diadenylate cyclase-like JO41_12660 IPR034701 JO41_12660 JO41_12660 IPR036888 JO41_12660 JO41_12665 IPR000489 Pterin-binding JO41_12665 IPR006390 Dihydropteroate synthase JO41_12665 IPR011005 Dihydropteroate synthase-like JO41_12675 IPR011856 tRNA endonuclease-like domain JO41_12685 IPR009785 Lactobacillus prophage Lj928, Orf309 JO41_12725 IPR000330 SNF2-related JO41_12725 IPR002941 DNA methylase N-4/N-6 JO41_12725 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JO41_12725 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JO41_12730 IPR001387 Cro/C1-type helix-turn-helix domain JO41_12730 IPR010982 Lambda repressor-like, DNA-binding domain JO41_12735 IPR002611 IstB-like ATP-binding protein JO41_12735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12770 IPR006437 Bacteriophage terminase, large subunit JO41_12770 IPR035412 JO41_12770 JO41_12770 IPR035413 JO41_12770 JO41_12785 IPR009319 Bacteriophage A118, Gp4, minor capsid JO41_12835 IPR009636 Bacteriophage mv4, Gp20 JO41_12855 IPR019612 Minor capsid protein, putative JO41_12880 IPR019612 Minor capsid protein, putative JO41_12885 IPR021080 Minor capsid protein JO41_12900 IPR009660 Bacteriophage A500, Gp15