JO41_00130	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JO41_00165	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JO41_00165	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_00165	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JO41_00165	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JO41_00165	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_00165	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_00165	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_00165	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JO41_00190	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_00190	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_00190	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_00210	PWY-6829	tRNA methylation (yeast)
JO41_00210	PWY-7285	methylwyosine biosynthesis
JO41_00210	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
JO41_00305	PWY-6700	queuosine biosynthesis
JO41_00345	PWY-3861	mannitol degradation II
JO41_00345	PWY-3881	mannitol biosynthesis
JO41_00345	PWY-5659	GDP-mannose biosynthesis
JO41_00345	PWY-6992	1,5-anhydrofructose degradation
JO41_00345	PWY-7456	mannan degradation
JO41_00345	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
JO41_00345	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
JO41_00505	PWY-622	starch biosynthesis
JO41_00530	PWY-7980	JO41_00530
JO41_00765	PWY-6807	xyloglucan degradation II (exoglucanase)
JO41_00770	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_00770	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JO41_00770	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_00770	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_00780	PWY-6807	xyloglucan degradation II (exoglucanase)
JO41_00835	PWY-3821	galactose degradation III
JO41_00835	PWY-6317	galactose degradation I (Leloir pathway)
JO41_00835	PWY-6527	stachyose degradation
JO41_00875	PWY-7883	JO41_00875
JO41_01015	PWY-4041	&gamma;-glutamyl cycle
JO41_01015	PWY-4061	glutathione-mediated detoxification I
JO41_01015	PWY-5826	hypoglycin biosynthesis
JO41_01015	PWY-6842	glutathione-mediated detoxification II
JO41_01015	PWY-7112	4-hydroxy-2-nonenal detoxification
JO41_01015	PWY-7559	glutathione degradation (DUG pathway - yeast)
JO41_01050	PWY-4261	glycerol degradation I
JO41_01110	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JO41_01110	PWY-6148	tetrahydromethanopterin biosynthesis
JO41_01110	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JO41_01110	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JO41_01110	PWY-7852	JO41_01110
JO41_01110	PWY-7853	JO41_01110
JO41_01165	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JO41_01165	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JO41_01165	PWY-7953	JO41_01165
JO41_01170	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_01170	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JO41_01170	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_01170	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_01360	PWY-7980	JO41_01360
JO41_01405	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JO41_01520	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
JO41_01520	PWY-6164	3-dehydroquinate biosynthesis I
JO41_01520	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
JO41_01530	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JO41_01530	PWY-6855	chitin degradation I (archaea)
JO41_01530	PWY-6906	chitin derivatives degradation
JO41_01535	PWY-6906	chitin derivatives degradation
JO41_01535	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
JO41_01535	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
JO41_01540	PWY-7805	JO41_01540
JO41_01540	PWY-7807	JO41_01540
JO41_01545	PWY-6700	queuosine biosynthesis
JO41_01590	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JO41_01620	PWY-1042	glycolysis IV (plant cytosol)
JO41_01620	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JO41_01620	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_01620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JO41_01620	PWY-7385	1,3-propanediol biosynthesis (engineered)
JO41_01645	PWY-622	starch biosynthesis
JO41_01645	PWY-7902	JO41_01645
JO41_01850	PWY-6700	queuosine biosynthesis
JO41_01865	PWY-7805	JO41_01865
JO41_01865	PWY-7807	JO41_01865
JO41_02350	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JO41_02350	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_02350	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_02350	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JO41_02350	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JO41_02350	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JO41_02390	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JO41_02390	PWY-6416	quinate degradation II
JO41_02390	PWY-6707	gallate biosynthesis
JO41_02395	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JO41_02395	PWY-5723	Rubisco shunt
JO41_02400	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
JO41_02400	PWY-6153	autoinducer AI-2 biosynthesis I
JO41_02400	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
JO41_02445	PWY-1361	benzoyl-CoA degradation I (aerobic)
JO41_02445	PWY-5109	2-methylbutanoate biosynthesis
JO41_02445	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JO41_02445	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
JO41_02445	PWY-5177	glutaryl-CoA degradation
JO41_02445	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JO41_02445	PWY-6435	4-hydroxybenzoate biosynthesis V
JO41_02445	PWY-6583	pyruvate fermentation to butanol I
JO41_02445	PWY-6863	pyruvate fermentation to hexanol
JO41_02445	PWY-6883	pyruvate fermentation to butanol II
JO41_02445	PWY-6944	androstenedione degradation
JO41_02445	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
JO41_02445	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
JO41_02445	PWY-7007	methyl ketone biosynthesis
JO41_02445	PWY-7046	4-coumarate degradation (anaerobic)
JO41_02445	PWY-7094	fatty acid salvage
JO41_02445	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
JO41_02445	PWY-735	jasmonic acid biosynthesis
JO41_02445	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
JO41_02445	PWY-7606	docosahexaenoate biosynthesis III (mammals)
JO41_02445	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
JO41_02445	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
JO41_02445	PWY-7726	JO41_02445
JO41_02445	PWY-7778	JO41_02445
JO41_02445	PWY-7779	JO41_02445
JO41_02490	PWY-5686	UMP biosynthesis
JO41_02490	PWY-7790	JO41_02490
JO41_02490	PWY-7791	JO41_02490
JO41_02495	PWY-5686	UMP biosynthesis
JO41_02495	PWY-7790	JO41_02495
JO41_02495	PWY-7791	JO41_02495
JO41_02520	PWY-5686	UMP biosynthesis
JO41_02520	PWY-7790	JO41_02520
JO41_02520	PWY-7791	JO41_02520
JO41_02535	PWY-6825	phosphatidylcholine biosynthesis V
JO41_02620	PWY-5482	pyruvate fermentation to acetate II
JO41_02620	PWY-5485	pyruvate fermentation to acetate IV
JO41_02620	PWY-5497	purine nucleobases degradation II (anaerobic)
JO41_02640	PWY-5480	pyruvate fermentation to ethanol I
JO41_02640	PWY-5485	pyruvate fermentation to acetate IV
JO41_02640	PWY-5493	reductive monocarboxylic acid cycle
JO41_02650	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
JO41_02670	PWY-1042	glycolysis IV (plant cytosol)
JO41_02670	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JO41_02670	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_02670	PWY-7385	1,3-propanediol biosynthesis (engineered)
JO41_02685	PWY-7205	CMP phosphorylation
JO41_02790	PWY-3461	L-tyrosine biosynthesis II
JO41_02790	PWY-3462	L-phenylalanine biosynthesis II
JO41_02790	PWY-6120	L-tyrosine biosynthesis III
JO41_02790	PWY-6627	salinosporamide A biosynthesis
JO41_02790	PWY-7626	bacilysin biosynthesis
JO41_02795	PWY-622	starch biosynthesis
JO41_02830	PWY-5392	reductive TCA cycle II
JO41_02830	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JO41_02830	PWY-5690	TCA cycle II (plants and fungi)
JO41_02830	PWY-5913	TCA cycle VI (obligate autotrophs)
JO41_02830	PWY-6728	methylaspartate cycle
JO41_02830	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JO41_02830	PWY-7254	TCA cycle VII (acetate-producers)
JO41_02830	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JO41_02835	PWY-6556	pyrimidine ribonucleosides salvage II
JO41_02835	PWY-7181	pyrimidine deoxyribonucleosides degradation
JO41_02835	PWY-7193	pyrimidine ribonucleosides salvage I
JO41_02835	PWY-7199	pyrimidine deoxyribonucleosides salvage
JO41_02855	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JO41_02855	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
JO41_02855	PWY-7242	D-fructuronate degradation
JO41_02855	PWY-7310	D-glucosaminate degradation
JO41_02855	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
JO41_02875	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JO41_02875	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_02875	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JO41_02875	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JO41_02900	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
JO41_03170	PWY-6749	CMP-legionaminate biosynthesis I
JO41_03185	PWY-1042	glycolysis IV (plant cytosol)
JO41_03185	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JO41_03185	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_03185	PWY-5723	Rubisco shunt
JO41_03185	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JO41_03185	PWY-6886	1-butanol autotrophic biosynthesis
JO41_03185	PWY-6901	superpathway of glucose and xylose degradation
JO41_03185	PWY-7003	glycerol degradation to butanol
JO41_03185	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JO41_03185	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JO41_03200	PWY-5381	pyridine nucleotide cycling (plants)
JO41_03200	PWY-7761	JO41_03200
JO41_03205	PWY-4381	fatty acid biosynthesis initiation I
JO41_03225	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JO41_03225	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JO41_03225	PWY-7953	JO41_03225
JO41_03280	PWY-1042	glycolysis IV (plant cytosol)
JO41_03280	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_03280	PWY-6901	superpathway of glucose and xylose degradation
JO41_03280	PWY-7003	glycerol degradation to butanol
JO41_03365	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JO41_03395	PWY-5941	glycogen degradation II (eukaryotic)
JO41_03395	PWY-6731	starch degradation III
JO41_03395	PWY-6737	starch degradation V
JO41_03395	PWY-7238	sucrose biosynthesis II
JO41_03400	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JO41_03400	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JO41_03400	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_03400	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_03400	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JO41_03400	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JO41_03400	PWY-7205	CMP phosphorylation
JO41_03400	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JO41_03400	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_03400	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JO41_03400	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_03400	PWY-7224	purine deoxyribonucleosides salvage
JO41_03400	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_03400	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JO41_03485	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JO41_03500	PWY-1281	sulfoacetaldehyde degradation I
JO41_03500	PWY-5482	pyruvate fermentation to acetate II
JO41_03500	PWY-5485	pyruvate fermentation to acetate IV
JO41_03500	PWY-5497	purine nucleobases degradation II (anaerobic)
JO41_03500	PWY-6637	sulfolactate degradation II
JO41_03575	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JO41_03575	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JO41_03575	PWY-7953	JO41_03575
JO41_03710	PWY-4202	arsenate detoxification I (glutaredoxin)
JO41_03710	PWY-5532	adenosine nucleotides degradation IV
JO41_03710	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JO41_03710	PWY-6608	guanosine nucleotides degradation III
JO41_03710	PWY-6609	adenine and adenosine salvage III
JO41_03710	PWY-6611	adenine and adenosine salvage V
JO41_03710	PWY-6620	guanine and guanosine salvage
JO41_03710	PWY-6627	salinosporamide A biosynthesis
JO41_03710	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
JO41_03710	PWY-7179	purine deoxyribonucleosides degradation I
JO41_03710	PWY-7179-1	purine deoxyribonucleosides degradation
JO41_03730	PWY-7511	protein ubiquitylation
JO41_03775	PWY-7560	methylerythritol phosphate pathway II
JO41_03780	PWY-7560	methylerythritol phosphate pathway II
JO41_03830	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JO41_03830	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JO41_03830	PWY-5989	stearate biosynthesis II (bacteria and plants)
JO41_03830	PWY-5994	palmitate biosynthesis I (animals and fungi)
JO41_03830	PWY-6113	superpathway of mycolate biosynthesis
JO41_03830	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JO41_03830	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JO41_03830	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JO41_03830	PWY-7663	gondoate biosynthesis (anaerobic)
JO41_03830	PWY-7664	oleate biosynthesis IV (anaerobic)
JO41_03830	PWY-7858	JO41_03830
JO41_03830	PWYG-321	mycolate biosynthesis
JO41_03845	PWY-4381	fatty acid biosynthesis initiation I
JO41_03845	PWY-6799	fatty acid biosynthesis (plant mitochondria)
JO41_03845	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JO41_03850	PWY-4381	fatty acid biosynthesis initiation I
JO41_03935	PWY-6654	phosphopantothenate biosynthesis III
JO41_04055	PWY-6012	acyl carrier protein metabolism I
JO41_04055	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
JO41_04055	PWY-6289	petrobactin biosynthesis
JO41_04085	PWY-101	photosynthesis light reactions
JO41_04100	PWY-7805	JO41_04100
JO41_04100	PWY-7807	JO41_04100
JO41_04155	PWY-3821	galactose degradation III
JO41_04155	PWY-6317	galactose degradation I (Leloir pathway)
JO41_04155	PWY-6527	stachyose degradation
JO41_04310	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
JO41_04520	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
JO41_04730	PWY-5941	glycogen degradation II (eukaryotic)
JO41_04730	PWY-6724	starch degradation II
JO41_04730	PWY-6737	starch degradation V
JO41_04730	PWY-7238	sucrose biosynthesis II
JO41_04830	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JO41_04830	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_04830	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JO41_04830	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JO41_04830	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_04830	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_04830	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JO41_04830	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JO41_04915	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JO41_04915	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JO41_05060	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JO41_05110	PWY-6938	NADH repair
JO41_05210	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
JO41_05260	PWY-7799	JO41_05260
JO41_05260	PWY-7800	JO41_05260
JO41_05455	PWY-5269	cardiolipin biosynthesis II
JO41_05455	PWY-5668	cardiolipin biosynthesis I
JO41_05455	PWY-7817	JO41_05455
JO41_05490	PWY-4202	arsenate detoxification I (glutaredoxin)
JO41_05490	PWY-5532	adenosine nucleotides degradation IV
JO41_05490	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JO41_05490	PWY-6608	guanosine nucleotides degradation III
JO41_05490	PWY-6609	adenine and adenosine salvage III
JO41_05490	PWY-6611	adenine and adenosine salvage V
JO41_05490	PWY-6620	guanine and guanosine salvage
JO41_05490	PWY-6627	salinosporamide A biosynthesis
JO41_05490	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
JO41_05490	PWY-7179	purine deoxyribonucleosides degradation I
JO41_05490	PWY-7179-1	purine deoxyribonucleosides degradation
JO41_05500	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_05500	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_05695	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JO41_05695	PWY-6596	adenosine nucleotides degradation I
JO41_05695	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JO41_05700	PWY-1042	glycolysis IV (plant cytosol)
JO41_05700	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JO41_05700	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_05700	PWY-7385	1,3-propanediol biosynthesis (engineered)
JO41_05780	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JO41_05780	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JO41_05780	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
JO41_05795	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JO41_05795	PWY-6578	8-amino-7-oxononanoate biosynthesis III
JO41_05795	PWY-7147	8-amino-7-oxononanoate biosynthesis II
JO41_05810	PWY-7851	JO41_05810
JO41_05820	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
JO41_05820	PWY-2161	folate polyglutamylation
JO41_05820	PWY-2201	folate transformations I
JO41_05820	PWY-3841	folate transformations II
JO41_05845	PWY-7851	JO41_05845
JO41_05885	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_05890	PWY-5941	glycogen degradation II (eukaryotic)
JO41_05890	PWY-6724	starch degradation II
JO41_05890	PWY-6737	starch degradation V
JO41_05890	PWY-7238	sucrose biosynthesis II
JO41_05895	PWY-3821	galactose degradation III
JO41_05895	PWY-6317	galactose degradation I (Leloir pathway)
JO41_05895	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JO41_05895	PWY-6527	stachyose degradation
JO41_05895	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
JO41_05895	PWY-7344	UDP-D-galactose biosynthesis
JO41_05990	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
JO41_06085	PWY-6749	CMP-legionaminate biosynthesis I
JO41_06260	PWY-6910	hydroxymethylpyrimidine salvage
JO41_06260	PWY-7356	thiamin salvage IV (yeast)
JO41_06260	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
JO41_06265	PWY-7181	pyrimidine deoxyribonucleosides degradation
JO41_06270	PWY-7805	JO41_06270
JO41_06270	PWY-7807	JO41_06270
JO41_06345	PWY-4261	glycerol degradation I
JO41_06380	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
JO41_06380	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
JO41_06390	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_06390	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JO41_06390	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_06390	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_06430	PWY-5481	pyruvate fermentation to lactate
JO41_06430	PWY-6901	superpathway of glucose and xylose degradation
JO41_06490	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JO41_06490	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
JO41_06710	PWY-4381	fatty acid biosynthesis initiation I
JO41_06710	PWY-5743	3-hydroxypropanoate cycle
JO41_06710	PWY-5744	glyoxylate assimilation
JO41_06710	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JO41_06710	PWY-6722	candicidin biosynthesis
JO41_06715	PWY-4381	fatty acid biosynthesis initiation I
JO41_06715	PWY-5743	3-hydroxypropanoate cycle
JO41_06715	PWY-5744	glyoxylate assimilation
JO41_06715	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JO41_06715	PWY-6722	candicidin biosynthesis
JO41_06730	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JO41_06730	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JO41_06730	PWY-5989	stearate biosynthesis II (bacteria and plants)
JO41_06730	PWY-6113	superpathway of mycolate biosynthesis
JO41_06730	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JO41_06730	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JO41_06730	PWY-7663	gondoate biosynthesis (anaerobic)
JO41_06730	PWY-7664	oleate biosynthesis IV (anaerobic)
JO41_06730	PWY-7858	JO41_06730
JO41_06730	PWYG-321	mycolate biosynthesis
JO41_06775	PWY-5686	UMP biosynthesis
JO41_06775	PWY-7790	JO41_06775
JO41_06775	PWY-7791	JO41_06775
JO41_07070	PWY-6038	citrate degradation
JO41_07150	PWY-5381	pyridine nucleotide cycling (plants)
JO41_07175	PWY-7805	JO41_07175
JO41_07175	PWY-7807	JO41_07175
JO41_07495	PWY-5199	factor 420 polyglutamylation
JO41_07530	PWY-7884	JO41_07530
JO41_07580	PWY-6610	adenine and adenosine salvage IV
JO41_07685	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JO41_07725	PWY-7980	JO41_07725
JO41_07730	PWY-7980	JO41_07730
JO41_07745	PWY-6317	galactose degradation I (Leloir pathway)
JO41_07755	PWY-6891	thiazole biosynthesis II (Bacillus)
JO41_07755	PWY-6892	thiazole biosynthesis I (E. coli)
JO41_07755	PWY-7560	methylerythritol phosphate pathway II
JO41_08030	PWY-7205	CMP phosphorylation
JO41_08040	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JO41_08040	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JO41_08040	PWY-7953	JO41_08040
JO41_08055	PWY-6032	cardenolide biosynthesis
JO41_08055	PWY-7455	allopregnanolone biosynthesis
JO41_08460	PWY-6902	chitin degradation II
JO41_08460	PWY-7822	JO41_08460
JO41_08460	PWY-7883	JO41_08460
JO41_08490	PWY-4981	L-proline biosynthesis II (from arginine)
JO41_08495	PWY-4981	L-proline biosynthesis II (from arginine)
JO41_08495	PWY-4984	urea cycle
JO41_08495	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JO41_08515	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JO41_08515	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JO41_08520	PWY-6605	adenine and adenosine salvage II
JO41_08520	PWY-6610	adenine and adenosine salvage IV
JO41_08520	PWY-7805	JO41_08520
JO41_08520	PWY-7807	JO41_08520
JO41_08615	PWY-4261	glycerol degradation I
JO41_08640	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JO41_08665	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JO41_08845	PWY-7942	JO41_08845
JO41_08960	PWY-1042	glycolysis IV (plant cytosol)
JO41_08960	PWY-1622	formaldehyde assimilation I (serine pathway)
JO41_08960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JO41_08960	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_08960	PWY-5723	Rubisco shunt
JO41_08960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JO41_08960	PWY-6886	1-butanol autotrophic biosynthesis
JO41_08960	PWY-6901	superpathway of glucose and xylose degradation
JO41_08960	PWY-7003	glycerol degradation to butanol
JO41_08960	PWY-7124	ethylene biosynthesis V (engineered)
JO41_08960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JO41_09005	PWY-5381	pyridine nucleotide cycling (plants)
JO41_09005	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JO41_09005	PWY-7761	JO41_09005
JO41_09055	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
JO41_09055	PWY-6167	flavin biosynthesis II (archaea)
JO41_09055	PWY-6168	flavin biosynthesis III (fungi)
JO41_09055	PWY-7863	JO41_09055
JO41_09190	PWY-4202	arsenate detoxification I (glutaredoxin)
JO41_09190	PWY-5532	adenosine nucleotides degradation IV
JO41_09190	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JO41_09190	PWY-6608	guanosine nucleotides degradation III
JO41_09190	PWY-6609	adenine and adenosine salvage III
JO41_09190	PWY-6611	adenine and adenosine salvage V
JO41_09190	PWY-6620	guanine and guanosine salvage
JO41_09190	PWY-6627	salinosporamide A biosynthesis
JO41_09190	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
JO41_09190	PWY-7179	purine deoxyribonucleosides degradation I
JO41_09190	PWY-7179-1	purine deoxyribonucleosides degradation
JO41_09340	PWY-5913	TCA cycle VI (obligate autotrophs)
JO41_09340	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
JO41_09340	PWY-6638	sulfolactate degradation III
JO41_09340	PWY-6642	(<i>R</i>)-cysteate degradation
JO41_09340	PWY-6643	coenzyme M biosynthesis II
JO41_09340	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JO41_09340	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JO41_09340	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JO41_09655	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JO41_09810	PWY-7560	methylerythritol phosphate pathway II
JO41_09895	PWY-4381	fatty acid biosynthesis initiation I
JO41_09895	PWY-5743	3-hydroxypropanoate cycle
JO41_09895	PWY-5744	glyoxylate assimilation
JO41_09895	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JO41_09895	PWY-6722	candicidin biosynthesis
JO41_09985	PWY-5098	chlorophyll <i>a</i> degradation I
JO41_09985	PWY-6927	chlorophyll <i>a</i> degradation II
JO41_09985	PWY-7164	chlorophyll <i>a</i> degradation III
JO41_10020	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JO41_10020	PWY-6549	L-glutamine biosynthesis III
JO41_10020	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JO41_10020	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JO41_10075	PWY-1042	glycolysis IV (plant cytosol)
JO41_10075	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_10075	PWY-6886	1-butanol autotrophic biosynthesis
JO41_10075	PWY-6901	superpathway of glucose and xylose degradation
JO41_10075	PWY-7003	glycerol degradation to butanol
JO41_10135	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JO41_10135	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JO41_10135	PWY-7953	JO41_10135
JO41_10195	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JO41_10195	PWY-5723	Rubisco shunt
JO41_10225	PWY-5381	pyridine nucleotide cycling (plants)
JO41_10225	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JO41_10225	PWY-7761	JO41_10225
JO41_10255	PWY-3801	sucrose degradation II (sucrose synthase)
JO41_10255	PWY-5054	sorbitol biosynthesis I
JO41_10255	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
JO41_10255	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JO41_10255	PWY-5659	GDP-mannose biosynthesis
JO41_10255	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JO41_10255	PWY-621	sucrose degradation III (sucrose invertase)
JO41_10255	PWY-622	starch biosynthesis
JO41_10255	PWY-6981	chitin biosynthesis
JO41_10255	PWY-6992	1,5-anhydrofructose degradation
JO41_10255	PWY-7238	sucrose biosynthesis II
JO41_10255	PWY-7347	sucrose biosynthesis III
JO41_10255	PWY-7385	1,3-propanediol biosynthesis (engineered)
JO41_10480	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_10480	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_10480	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_10510	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JO41_10715	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_10715	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_10720	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_10720	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JO41_10720	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_10720	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_10730	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JO41_10835	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_10835	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_10835	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JO41_11005	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JO41_11005	PWY-7177	UTP and CTP dephosphorylation II
JO41_11005	PWY-7185	UTP and CTP dephosphorylation I
JO41_11030	PWY-7887	JO41_11030
JO41_11030	PWY-7892	JO41_11030
JO41_11070	PWY-5667	CDP-diacylglycerol biosynthesis I
JO41_11070	PWY-5981	CDP-diacylglycerol biosynthesis III
JO41_11070	PWY-7902	JO41_11070
JO41_11120	PWY-7723	JO41_11120
JO41_11145	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JO41_11145	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JO41_11145	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
JO41_11220	PWY-7560	methylerythritol phosphate pathway II
JO41_11275	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JO41_11275	PWY-5723	Rubisco shunt
JO41_11275	PWY-6891	thiazole biosynthesis II (Bacillus)
JO41_11275	PWY-6892	thiazole biosynthesis I (E. coli)
JO41_11275	PWY-6901	superpathway of glucose and xylose degradation
JO41_11275	PWY-7560	methylerythritol phosphate pathway II
JO41_11325	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JO41_11325	PWY-622	starch biosynthesis
JO41_11325	PWY-7900	JO41_11325
JO41_11330	PWY-1622	formaldehyde assimilation I (serine pathway)
JO41_11330	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_11385	PWY-1042	glycolysis IV (plant cytosol)
JO41_11385	PWY-5484	glycolysis II (from fructose 6-phosphate)
JO41_11385	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JO41_11385	PWY-7003	glycerol degradation to butanol
JO41_11535	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
JO41_11740	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
JO41_11740	PWY-2201	folate transformations I
JO41_11740	PWY-3841	folate transformations II
JO41_11740	PWY-5030	L-histidine degradation III
JO41_11740	PWY-5497	purine nucleobases degradation II (anaerobic)
JO41_11740	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
JO41_11740	PWY-7909	JO41_11740
JO41_11745	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_11745	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JO41_11745	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_11745	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_11815	PWY-7560	methylerythritol phosphate pathway II
JO41_11820	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JO41_11825	PWY-6164	3-dehydroquinate biosynthesis I
JO41_11985	PWY-7723	JO41_11985
JO41_12005	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JO41_12005	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JO41_12005	PWY-5989	stearate biosynthesis II (bacteria and plants)
JO41_12005	PWY-5994	palmitate biosynthesis I (animals and fungi)
JO41_12005	PWY-6113	superpathway of mycolate biosynthesis
JO41_12005	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JO41_12005	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JO41_12005	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JO41_12005	PWY-7663	gondoate biosynthesis (anaerobic)
JO41_12005	PWY-7664	oleate biosynthesis IV (anaerobic)
JO41_12005	PWY-7858	JO41_12005
JO41_12005	PWYG-321	mycolate biosynthesis
JO41_12145	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JO41_12145	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
JO41_12155	PWY-6749	CMP-legionaminate biosynthesis I
JO41_12165	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_12165	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JO41_12165	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_12165	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_12170	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JO41_12190	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JO41_12245	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JO41_12245	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JO41_12245	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JO41_12245	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JO41_12650	PWY-6012	acyl carrier protein metabolism I
JO41_12650	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
JO41_12650	PWY-6289	petrobactin biosynthesis
JO41_12665	PWY-6614	tetrahydrofolate biosynthesis
