JO41_12105 71e08b2313c52953bbbc492039862616 238 Gene3D G3DSA:3.40.50.1820 12 233 3.0E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_12105 71e08b2313c52953bbbc492039862616 238 Pfam PF00756 Putative esterase 24 153 1.6E-8 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JO41_12105 71e08b2313c52953bbbc492039862616 238 SUPERFAMILY SSF53474 21 232 1.17E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_01945 07096755307fe3d33ae72cf0c5781489 336 SUPERFAMILY SSF52540 28 266 1.82E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01945 07096755307fe3d33ae72cf0c5781489 336 SMART SM00382 48 245 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01945 07096755307fe3d33ae72cf0c5781489 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_01945 07096755307fe3d33ae72cf0c5781489 336 Gene3D G3DSA:3.40.50.300 9 336 4.4E-98 T 14-10-2018 JO41_01945 07096755307fe3d33ae72cf0c5781489 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 334 2.0E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO41_01945 07096755307fe3d33ae72cf0c5781489 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 314 4.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO41_01945 07096755307fe3d33ae72cf0c5781489 336 Pfam PF00005 ABC transporter 40 195 5.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 Gene3D G3DSA:3.90.120.10 240 331 1.4E-7 T 14-10-2018 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 148 161 2.8E-9 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 102 116 2.8E-9 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 2.8E-9 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 SUPERFAMILY SSF53335 1 341 2.43E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 63 75 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 341 5.3E-62 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 339 1.6E-64 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 JO41_02065 5a2cfbe8cd6b765c0f807246dd468f09 347 Gene3D G3DSA:3.40.50.150 1 214 4.8E-56 T 14-10-2018 JO41_05645 4fc6593997c1d300d13a6166a6bd36a0 751 Gene3D G3DSA:1.20.1250.20 232 428 4.4E-12 T 14-10-2018 JO41_05645 4fc6593997c1d300d13a6166a6bd36a0 751 Gene3D G3DSA:1.20.1250.20 21 212 3.3E-6 T 14-10-2018 JO41_05645 4fc6593997c1d300d13a6166a6bd36a0 751 SUPERFAMILY SSF48371 441 581 4.92E-10 T 14-10-2018 IPR016024 Armadillo-type fold JO41_05645 4fc6593997c1d300d13a6166a6bd36a0 751 Pfam PF07690 Major Facilitator Superfamily 23 267 1.5E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JO41_05645 4fc6593997c1d300d13a6166a6bd36a0 751 Gene3D G3DSA:1.25.10.10 444 641 5.7E-9 T 14-10-2018 IPR011989 Armadillo-like helical JO41_05645 4fc6593997c1d300d13a6166a6bd36a0 751 SUPERFAMILY SSF103473 20 427 7.32E-31 T 14-10-2018 IPR036259 MFS transporter superfamily JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 Gene3D G3DSA:3.40.50.620 1 220 1.2E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 Gene3D G3DSA:3.10.290.10 322 405 4.7E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 405 5.2E-121 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 Pfam PF00579 tRNA synthetases class I (W and Y) 29 315 1.8E-76 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 405 40.263 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 Gene3D G3DSA:1.10.240.10 221 321 5.0E-29 T 14-10-2018 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 SUPERFAMILY SSF52374 2 315 1.72E-95 T 14-10-2018 JO41_03590 2b1012e21ce7a84c88689b5d7c60a3ff 406 SUPERFAMILY SSF55174 323 404 9.03E-15 T 14-10-2018 JO41_09890 8cc69fd189ee7e9eea50a5995a40ed3a 266 SUPERFAMILY SSF100950 5 261 2.51E-69 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_09890 8cc69fd189ee7e9eea50a5995a40ed3a 266 Gene3D G3DSA:3.40.1080.10 4 263 1.3E-85 T 14-10-2018 JO41_09890 8cc69fd189ee7e9eea50a5995a40ed3a 266 Pfam PF01144 Coenzyme A transferase 12 225 7.5E-43 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JO41_09890 8cc69fd189ee7e9eea50a5995a40ed3a 266 SMART SM00882 12 225 8.5E-6 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 Gene3D G3DSA:3.40.367.20 34 437 7.9E-64 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 Pfam PF00349 Hexokinase 16 201 2.7E-21 T 14-10-2018 IPR022672 Hexokinase, N-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 Pfam PF03727 Hexokinase 215 443 8.6E-29 T 14-10-2018 IPR022673 Hexokinase, C-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 SUPERFAMILY SSF53067 21 202 1.3E-28 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 Gene3D G3DSA:3.30.420.40 59 442 7.9E-64 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 PRINTS PR00475 Hexokinase family signature 72 88 2.2E-24 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 PRINTS PR00475 Hexokinase family signature 187 203 2.2E-24 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 PRINTS PR00475 Hexokinase family signature 280 302 2.2E-24 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 PRINTS PR00475 Hexokinase family signature 215 229 2.2E-24 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 PRINTS PR00475 Hexokinase family signature 356 378 2.2E-24 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 PRINTS PR00475 Hexokinase family signature 134 159 2.2E-24 T 14-10-2018 JO41_01705 4cbb24063ee1a87d16e59501bd60052d 446 SUPERFAMILY SSF53067 214 444 6.01E-30 T 14-10-2018 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 427 2.9E-57 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Gene3D G3DSA:3.40.50.300 208 431 6.7E-25 T 14-10-2018 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 SUPERFAMILY SSF52540 3 856 2.24E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1019 1148 4.4E-6 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Gene3D G3DSA:3.40.50.300 734 921 9.3E-23 T 14-10-2018 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Pfam PF13361 UvrD-like helicase C-terminal domain 437 853 2.9E-27 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 SUPERFAMILY SSF52980 1017 1133 2.9E-15 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Gene3D G3DSA:3.90.320.10 1040 1135 3.4E-9 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Gene3D G3DSA:3.40.50.300 2 160 1.6E-32 T 14-10-2018 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Gene3D G3DSA:3.40.50.300 440 595 3.7E-21 T 14-10-2018 JO41_04660 8a6cb43227ad2567c637165b3934fdd5 1165 Gene3D G3DSA:1.10.486.10 596 733 5.7E-5 T 14-10-2018 JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 Pfam PF00005 ABC transporter 25 172 5.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 Gene3D G3DSA:3.40.50.300 3 232 4.2E-63 T 14-10-2018 JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 SMART SM00382 33 222 2.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 SUPERFAMILY SSF52540 4 253 4.6E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 Gene3D G3DSA:2.40.50.940 233 347 7.0E-6 T 14-10-2018 JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 Gene3D G3DSA:2.40.50.140 293 346 7.0E-6 T 14-10-2018 JO41_04695 b55bd6737ded7eb4e8338ea02da4c87c 369 SUPERFAMILY SSF50331 263 347 1.36E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Gene3D G3DSA:3.40.50.300 385 559 7.6E-70 T 14-10-2018 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 7 887 16.896 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Gene3D G3DSA:2.40.30.10 560 677 2.0E-37 T 14-10-2018 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Gene3D G3DSA:2.40.30.10 791 888 1.2E-29 T 14-10-2018 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 313 362 9.7E-16 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 ProSitePatterns PS01176 Initiation factor 2 signature. 840 862 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 888 7.5E-259 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 SUPERFAMILY SSF52156 666 796 4.32E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Pfam PF11987 Translation-initiation factor 2 674 779 8.5E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 390 547 3.7E-29 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Gene3D G3DSA:3.40.50.10050 683 790 1.4E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 Pfam PF00009 Elongation factor Tu GTP binding domain 393 549 3.5E-32 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 SUPERFAMILY SSF50447 791 887 6.03E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 SUPERFAMILY SSF52540 371 561 1.42E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09040 c0d3411d3e12a33db39a9c116078f56b 909 SUPERFAMILY SSF50447 562 643 3.98E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_03670 1152bb2550c6e301477289de09b85d80 903 Gene3D G3DSA:1.20.1640.10 696 893 4.5E-12 T 14-10-2018 JO41_03670 1152bb2550c6e301477289de09b85d80 903 Gene3D G3DSA:1.20.1640.10 201 385 3.0E-14 T 14-10-2018 JO41_03670 1152bb2550c6e301477289de09b85d80 903 SUPERFAMILY SSF82866 180 383 3.92E-34 T 14-10-2018 JO41_03670 1152bb2550c6e301477289de09b85d80 903 SUPERFAMILY SSF82866 690 891 1.44E-36 T 14-10-2018 JO41_03670 1152bb2550c6e301477289de09b85d80 903 Pfam PF03176 MMPL family 145 383 5.2E-28 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO41_03670 1152bb2550c6e301477289de09b85d80 903 Pfam PF03176 MMPL family 679 887 2.1E-22 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 SUPERFAMILY SSF82708 180 222 3.14E-7 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 Gene3D G3DSA:3.30.30.80 2 52 3.8E-6 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 SMART SM01245 4 53 2.8E-11 T 14-10-2018 IPR032782 Jag, N-terminal JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 Pfam PF01424 R3H domain 165 221 1.8E-10 T 14-10-2018 IPR001374 R3H domain GO:0003676 JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 Pfam PF13083 KH domain 84 146 3.5E-11 T 14-10-2018 JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 SMART SM00393 145 224 1.4E-20 T 14-10-2018 IPR001374 R3H domain GO:0003676 JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 Pfam PF14804 Jag N-terminus 5 51 4.7E-12 T 14-10-2018 IPR032782 Jag, N-terminal JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 Gene3D G3DSA:3.30.300.20 78 159 9.7E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO41_03445 9565ca3d8bcbe977f4d3d559e98fdebd 226 Gene3D G3DSA:3.30.1370.50 160 225 3.1E-23 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 SUPERFAMILY SSF103190 98 194 7.85E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 7.4E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 572 7.4E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 541 7.4E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 591 620 7.4E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 SMART SM00304 319 373 5.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 Gene3D G3DSA:1.20.1480.50 280 377 1.0E-8 T 14-10-2018 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 Gene3D G3DSA:3.30.450.20 93 183 4.5E-18 T 14-10-2018 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 SUPERFAMILY SSF58104 422 661 1.22E-44 T 14-10-2018 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 Pfam PF00672 HAMP domain 321 368 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 631 1.1E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 SUPERFAMILY SSF58104 341 442 1.26E-8 T 14-10-2018 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 SMART SM00283 416 663 1.4E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 Gene3D G3DSA:1.10.287.950 406 705 6.0E-47 T 14-10-2018 JO41_09085 96e7941504b5f393ab00a4df9f7f3041 706 Pfam PF02743 Cache domain 46 281 7.0E-24 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_02755 8def07710a03e22eec08461a56df343a 361 SUPERFAMILY SSF109604 151 333 3.45E-34 T 14-10-2018 JO41_02755 8def07710a03e22eec08461a56df343a 361 Pfam PF01966 HD domain 175 294 1.7E-17 T 14-10-2018 IPR006674 HD domain JO41_02755 8def07710a03e22eec08461a56df343a 361 SMART SM00471 163 304 1.4E-5 T 14-10-2018 IPR003607 HD/PDEase domain JO41_02755 8def07710a03e22eec08461a56df343a 361 Gene3D G3DSA:1.10.3210.10 142 348 4.6E-65 T 14-10-2018 JO41_10595 2b30cd863c3ed5f5ac82ba82d9d786cb 437 Pfam PF00691 OmpA family 333 428 7.7E-17 T 14-10-2018 IPR006665 OmpA-like domain JO41_10595 2b30cd863c3ed5f5ac82ba82d9d786cb 437 Gene3D G3DSA:3.30.1330.60 303 437 4.8E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_10595 2b30cd863c3ed5f5ac82ba82d9d786cb 437 SUPERFAMILY SSF103088 323 434 3.01E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 Pfam PF00958 GMP synthase C terminal domain 423 514 2.5E-40 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 515 53.078 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 195 4.7E-75 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 206 515 1.4E-148 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 Pfam PF02540 NAD synthase 208 281 2.6E-6 T 14-10-2018 IPR022310 NAD/GMP synthase JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 SUPERFAMILY SSF52317 3 228 4.4E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 Pfam PF00117 Glutamine amidotransferase class-I 8 189 7.8E-39 T 14-10-2018 IPR017926 Glutamine amidotransferase JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 SUPERFAMILY SSF52402 184 437 3.98E-54 T 14-10-2018 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 1.8E-6 T 14-10-2018 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 1.8E-6 T 14-10-2018 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.8E-6 T 14-10-2018 JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 Gene3D G3DSA:3.40.50.880 1 196 4.6E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 Gene3D G3DSA:3.40.50.620 200 395 1.1E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10510 21e841a6046b28c45fbd8d9acff630ae 515 Gene3D G3DSA:3.30.300.10 396 515 5.1E-49 T 14-10-2018 JO41_07010 f7ea75bf9bb3ddaae61163428a424b92 264 SUPERFAMILY SSF89550 1 254 4.05E-34 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JO41_07010 f7ea75bf9bb3ddaae61163428a424b92 264 Pfam PF02811 PHP domain 5 171 8.8E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 JO41_07010 f7ea75bf9bb3ddaae61163428a424b92 264 Gene3D G3DSA:3.20.20.140 3 258 7.4E-51 T 14-10-2018 JO41_00865 887cf53f22409c6e399c67358654e5d8 339 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 30 326 2.5E-77 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 JO41_00865 887cf53f22409c6e399c67358654e5d8 339 SUPERFAMILY SSF53850 32 316 3.88E-64 T 14-10-2018 JO41_00865 887cf53f22409c6e399c67358654e5d8 339 Pfam PF13343 Bacterial extracellular solute-binding protein 85 308 1.0E-27 T 14-10-2018 JO41_00865 887cf53f22409c6e399c67358654e5d8 339 Gene3D G3DSA:3.40.190.10 35 313 2.0E-100 T 14-10-2018 JO41_00865 887cf53f22409c6e399c67358654e5d8 339 Gene3D G3DSA:3.40.190.10 138 334 2.0E-100 T 14-10-2018 JO41_08635 c43148e88f6256feb70ebb97f0d7faaf 261 Pfam PF13277 YmdB-like protein 9 256 2.0E-82 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like JO41_08635 c43148e88f6256feb70ebb97f0d7faaf 261 PIRSF PIRSF004789 4 260 3.7E-81 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like JO41_08635 c43148e88f6256feb70ebb97f0d7faaf 261 SUPERFAMILY SSF56300 5 257 3.8E-62 T 14-10-2018 JO41_08635 c43148e88f6256feb70ebb97f0d7faaf 261 Gene3D G3DSA:3.60.21.10 2 260 3.2E-87 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 SUPERFAMILY SSF52540 4 280 1.29E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 SUPERFAMILY SSF54211 475 594 1.24E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 180 2.4E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Gene3D G3DSA:3.40.50.300 1 289 2.1E-101 T 14-10-2018 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 SMART SM00889 476 593 1.8E-60 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 SUPERFAMILY SSF54980 400 477 1.44E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Gene3D G3DSA:2.40.30.10 290 401 7.1E-29 T 14-10-2018 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Pfam PF00679 Elongation factor G C-terminus 596 680 3.8E-26 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Gene3D G3DSA:3.30.70.870 402 479 6.3E-28 T 14-10-2018 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 SUPERFAMILY SSF54980 598 688 3.12E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 686 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.1E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Pfam PF03144 Elongation factor Tu domain 2 321 387 1.2E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Gene3D G3DSA:3.30.230.10 480 681 1.1E-79 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Pfam PF03764 Elongation factor G, domain IV 475 593 1.1E-40 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 SMART SM00838 595 682 1.5E-38 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 SUPERFAMILY SSF50447 249 398 8.01E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Hamap MF_00054_B Elongation factor G [fusA]. 4 686 105.599 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Gene3D G3DSA:3.30.70.240 599 669 1.1E-79 T 14-10-2018 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Pfam PF00009 Elongation factor Tu GTP binding domain 7 279 6.3E-61 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_06065 3585dc0bda3c0694a2cdbe14d3f279ea 696 Pfam PF14492 Elongation Factor G, domain II 400 473 4.2E-32 T 14-10-2018 JO41_03820 ea8aaa1e16e6978e50a6b70cd68dd2a6 481 Pfam PF01523 Putative modulator of DNA gyrase 34 325 2.0E-42 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JO41_03820 ea8aaa1e16e6978e50a6b70cd68dd2a6 481 SUPERFAMILY SSF111283 5 476 7.85E-85 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JO41_03820 ea8aaa1e16e6978e50a6b70cd68dd2a6 481 Gene3D G3DSA:3.30.2290.10 5 227 2.6E-11 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal JO41_11690 35b72f26d8df22efe73038f418584cf2 606 SMART SM00382 391 577 1.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11690 35b72f26d8df22efe73038f418584cf2 606 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11690 35b72f26d8df22efe73038f418584cf2 606 Gene3D G3DSA:3.40.50.300 358 598 1.6E-90 T 14-10-2018 JO41_11690 35b72f26d8df22efe73038f418584cf2 606 Pfam PF00005 ABC transporter 382 530 3.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11690 35b72f26d8df22efe73038f418584cf2 606 SUPERFAMILY SSF52540 355 598 7.45E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11690 35b72f26d8df22efe73038f418584cf2 606 Gene3D G3DSA:1.20.1560.10 11 321 5.7E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_11690 35b72f26d8df22efe73038f418584cf2 606 Pfam PF00664 ABC transporter transmembrane region 25 293 3.0E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_11690 35b72f26d8df22efe73038f418584cf2 606 SUPERFAMILY SSF90123 13 323 2.49E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_05760 fb6724af0115102a8caf90e279568578 340 Pfam PF01497 Periplasmic binding protein 88 284 4.8E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JO41_05760 fb6724af0115102a8caf90e279568578 340 Gene3D G3DSA:1.20.58.2180 173 329 2.2E-41 T 14-10-2018 JO41_05760 fb6724af0115102a8caf90e279568578 340 Gene3D G3DSA:3.40.50.1980 35 160 2.7E-26 T 14-10-2018 JO41_05760 fb6724af0115102a8caf90e279568578 340 Gene3D G3DSA:3.40.50.1980 189 289 2.2E-41 T 14-10-2018 JO41_05760 fb6724af0115102a8caf90e279568578 340 SUPERFAMILY SSF53807 38 331 2.12E-52 T 14-10-2018 JO41_02870 fe3c54a07d703947343947debf48761a 451 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 360 380 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JO41_02870 fe3c54a07d703947343947debf48761a 451 Pfam PF00860 Permease family 20 412 1.4E-75 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JO41_02870 fe3c54a07d703947343947debf48761a 451 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 443 3.5E-94 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JO41_06910 f0be4791ee7be3da065d1c7e1ecfb6e1 150 Pfam PF02502 Ribose/Galactose Isomerase 3 140 4.8E-45 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_06910 f0be4791ee7be3da065d1c7e1ecfb6e1 150 Gene3D G3DSA:3.40.1400.10 1 148 6.7E-49 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_06910 f0be4791ee7be3da065d1c7e1ecfb6e1 150 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 1.4E-44 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_06910 f0be4791ee7be3da065d1c7e1ecfb6e1 150 PIRSF PIRSF005384 1 148 6.7E-54 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_06910 f0be4791ee7be3da065d1c7e1ecfb6e1 150 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 145 4.8E-42 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 JO41_06910 f0be4791ee7be3da065d1c7e1ecfb6e1 150 SUPERFAMILY SSF89623 1 147 3.14E-48 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_01245 ba05f808859ea63801d8b6f627104796 421 SMART SM00839 184 419 7.2E-88 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 101 114 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 Gene3D G3DSA:3.40.50.10860 38 181 4.5E-61 T 14-10-2018 JO41_01245 ba05f808859ea63801d8b6f627104796 421 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 163 8.8E-53 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 3.4E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 3.4E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 3.4E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 3.4E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 PIRSF PIRSF000185 3 421 5.1E-151 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 JO41_01245 ba05f808859ea63801d8b6f627104796 421 SUPERFAMILY SSF51735 182 421 5.32E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_01245 ba05f808859ea63801d8b6f627104796 421 SUPERFAMILY SSF53223 6 184 1.73E-66 T 14-10-2018 JO41_01245 ba05f808859ea63801d8b6f627104796 421 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 182 419 3.9E-66 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JO41_01245 ba05f808859ea63801d8b6f627104796 421 Gene3D G3DSA:3.40.50.720 182 421 2.9E-82 T 14-10-2018 JO41_01285 f66b2205291910e6607c592e3e00f6c7 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 39 5.4E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO41_01285 f66b2205291910e6607c592e3e00f6c7 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 41 1.3E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO41_01285 f66b2205291910e6607c592e3e00f6c7 82 Gene3D G3DSA:2.10.260.10 1 42 1.0E-13 T 14-10-2018 JO41_01285 f66b2205291910e6607c592e3e00f6c7 82 SUPERFAMILY SSF89447 1 46 1.92E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO41_01285 f66b2205291910e6607c592e3e00f6c7 82 SMART SM00966 4 49 3.6E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 SUPERFAMILY SSF53807 40 312 7.85E-88 T 14-10-2018 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00690 Adhesin family signature 73 86 2.5E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00690 Adhesin family signature 86 103 2.5E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00690 Adhesin family signature 197 218 2.5E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00690 Adhesin family signature 250 268 2.5E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00690 Adhesin family signature 276 295 2.5E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00690 Adhesin family signature 42 60 2.5E-35 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 67 85 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 86 105 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 197 214 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 223 241 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 42 63 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 289 307 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 268 286 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 PRINTS PR00691 Adhesin B signature 246 263 1.4E-34 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 Gene3D G3DSA:3.40.50.1980 199 315 1.9E-38 T 14-10-2018 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 Pfam PF01297 Zinc-uptake complex component A periplasmic 45 308 7.6E-73 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 JO41_11890 3ac3028130b10c2589fa04fb49411cb4 316 Gene3D G3DSA:3.40.50.1980 43 198 8.7E-54 T 14-10-2018 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 Gene3D G3DSA:3.30.43.10 11 90 8.7E-25 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 SUPERFAMILY SSF56176 27 227 6.91E-39 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 319 1.7E-26 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 Gene3D G3DSA:3.30.465.10 99 236 3.5E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 SUPERFAMILY SSF56194 221 322 1.27E-33 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 Gene3D G3DSA:3.90.78.10 238 322 8.5E-31 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 Pfam PF01565 FAD binding domain 40 161 4.9E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 27 320 1.2E-69 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_10135 1f1f32353f77fe1e882973c97609133e 322 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 322 76.792 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 327 3.2E-99 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 Gene3D G3DSA:3.40.50.620 1 319 4.1E-131 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 487 34.757 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 Gene3D G3DSA:1.20.120.1910 320 486 4.4E-33 T 14-10-2018 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 SUPERFAMILY SSF52374 3 328 3.49E-87 T 14-10-2018 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 SUPERFAMILY SSF47323 368 486 1.44E-23 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 486 7.3E-146 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 204 222 5.1E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 5.1E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 235 256 5.1E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO41_10145 372946d5ba9a61a8a651cfa28287de00 487 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 5.1E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 SUPERFAMILY SSF55174 4 204 9.81E-51 T 14-10-2018 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 Gene3D G3DSA:1.10.1050.10 5 204 4.5E-67 T 14-10-2018 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 93 117 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 Gene3D G3DSA:3.10.290.10 94 189 4.5E-67 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 4 94 7.4E-22 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 29.534 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 Pfam PF01479 S4 domain 95 142 2.6E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 4 204 5.7E-61 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 SMART SM00363 95 155 1.1E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_01210 f87a9154e5b2f30b993075b98c4b1d9b 204 SMART SM01390 2 94 5.3E-29 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JO41_08030 25f8782b7c2ec35a7954692dbdb07b7a 191 Hamap MF_00239 Cytidylate kinase [cmk]. 13 180 37.757 T 14-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO41_08030 25f8782b7c2ec35a7954692dbdb07b7a 191 TIGRFAM TIGR02173 cyt_kin_arch: putative cytidylate kinase 14 177 3.0E-35 T 14-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO41_08030 25f8782b7c2ec35a7954692dbdb07b7a 191 SUPERFAMILY SSF52540 14 176 2.28E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08030 25f8782b7c2ec35a7954692dbdb07b7a 191 Pfam PF13189 Cytidylate kinase-like family 15 165 5.4E-14 T 14-10-2018 JO41_08030 25f8782b7c2ec35a7954692dbdb07b7a 191 Gene3D G3DSA:3.40.50.300 3 183 1.9E-34 T 14-10-2018 JO41_01700 f098523e553912392daea2fdb632fe45 391 SUPERFAMILY SSF143437 5 172 2.27E-33 T 14-10-2018 JO41_01700 f098523e553912392daea2fdb632fe45 391 Gene3D G3DSA:3.40.50.620 174 389 3.0E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_01700 f098523e553912392daea2fdb632fe45 391 SMART SM00981 71 164 2.9E-18 T 14-10-2018 IPR004114 THUMP domain GO:0003723 JO41_01700 f098523e553912392daea2fdb632fe45 391 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 7 370 1.4E-101 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 JO41_01700 f098523e553912392daea2fdb632fe45 391 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 391 119.703 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 JO41_01700 f098523e553912392daea2fdb632fe45 391 SUPERFAMILY SSF52402 175 376 2.65E-41 T 14-10-2018 JO41_01700 f098523e553912392daea2fdb632fe45 391 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 174 368 3.9E-73 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 JO41_01700 f098523e553912392daea2fdb632fe45 391 Pfam PF02926 THUMP domain 58 161 4.5E-17 T 14-10-2018 IPR004114 THUMP domain GO:0003723 JO41_01700 f098523e553912392daea2fdb632fe45 391 Gene3D G3DSA:3.30.2130.30 1 173 9.1E-41 T 14-10-2018 JO41_11010 ce5154adaf7471ede472b66c83529143 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 16 150 3.2E-16 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain JO41_11010 ce5154adaf7471ede472b66c83529143 151 Gene3D G3DSA:2.40.50.140 83 151 4.8E-22 T 14-10-2018 JO41_11010 ce5154adaf7471ede472b66c83529143 151 SUPERFAMILY SSF141322 84 150 1.44E-9 T 14-10-2018 JO41_03805 7d8d780beba250fc31e69770233a252e 455 Gene3D G3DSA:3.20.20.80 35 334 4.6E-83 T 14-10-2018 JO41_03805 7d8d780beba250fc31e69770233a252e 455 SUPERFAMILY SSF51445 6 379 7.97E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_03805 7d8d780beba250fc31e69770233a252e 455 Gene3D G3DSA:3.90.400.10 105 160 4.6E-83 T 14-10-2018 JO41_03805 7d8d780beba250fc31e69770233a252e 455 SMART SM00642 8 360 6.8E-45 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_03805 7d8d780beba250fc31e69770233a252e 455 Pfam PF00128 Alpha amylase, catalytic domain 40 328 6.6E-47 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_12645 93c850f1bd08df8a67ebaf2af34ab998 293 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 19 281 3.6E-60 T 14-10-2018 IPR018708 Protein of unknown function DUF2225 JO41_01510 49ae20326d6a324c6777469b48c0d0a0 249 Gene3D G3DSA:3.30.1600.10 34 170 3.6E-71 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily JO41_01510 49ae20326d6a324c6777469b48c0d0a0 249 Gene3D G3DSA:3.40.50.1220 16 233 3.6E-71 T 14-10-2018 JO41_01510 49ae20326d6a324c6777469b48c0d0a0 249 Pfam PF02146 Sir2 family 25 200 6.1E-52 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 JO41_01510 49ae20326d6a324c6777469b48c0d0a0 249 SUPERFAMILY SSF52467 6 233 3.09E-74 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 103 1.1E-19 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 98 20.017 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 SUPERFAMILY SSF50104 4 103 2.36E-30 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 Pfam PF00467 KOW motif 9 39 3.4E-6 T 14-10-2018 IPR005824 KOW JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 Gene3D G3DSA:2.30.30.30 1 103 2.4E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 5 103 1.1E-33 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04415 3ca9eb5af5d5e7693daa035aed0739bc 104 SMART SM00739 6 33 5.3E-5 T 14-10-2018 IPR005824 KOW JO41_11345 f2676c5f94dc1e839af1c0c933d14033 249 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11345 f2676c5f94dc1e839af1c0c933d14033 249 SMART SM00382 28 210 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11345 f2676c5f94dc1e839af1c0c933d14033 249 Pfam PF00005 ABC transporter 19 162 5.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11345 f2676c5f94dc1e839af1c0c933d14033 249 SUPERFAMILY SSF52540 2 225 2.11E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11345 f2676c5f94dc1e839af1c0c933d14033 249 Gene3D G3DSA:3.40.50.300 1 241 9.3E-64 T 14-10-2018 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Pfam PF04561 RNA polymerase Rpb2, domain 2 311 411 8.2E-19 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:3.90.1110.10 270 395 1.2E-25 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:3.90.1800.10 1053 1106 5.8E-10 T 14-10-2018 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:2.40.50.150 788 908 2.8E-47 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 SUPERFAMILY SSF64484 15 1149 0.0 T 14-10-2018 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 9 1143 12.08 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Pfam PF10385 RNA polymerase beta subunit external 1 domain 548 613 1.1E-18 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 13 892 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Pfam PF00562 RNA polymerase Rpb2, domain 6 675 1065 4.4E-156 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:2.40.270.10 748 787 2.7E-5 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:2.40.50.100 671 747 3.9E-27 T 14-10-2018 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 1.5E-24 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Pfam PF04565 RNA polymerase Rpb2, domain 3 470 538 4.7E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:2.40.270.10 909 1051 6.6E-54 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:3.90.1110.10 157 263 2.9E-20 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:3.90.1100.10 396 591 1.2E-61 T 14-10-2018 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:3.90.1100.10 16 156 2.7E-47 T 14-10-2018 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Gene3D G3DSA:3.90.1100.10 598 670 1.9E-19 T 14-10-2018 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 Pfam PF04563 RNA polymerase beta subunit 24 455 1.1E-24 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01790 66dc5c96e3429378dd18ca8544f2e5f0 1165 ProSitePatterns PS01166 RNA polymerases beta chain signature. 918 930 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_06915 db93bad8babed6f0d522cfdd6cd859db 232 SUPERFAMILY SSF52266 2 228 2.83E-23 T 14-10-2018 JO41_06915 db93bad8babed6f0d522cfdd6cd859db 232 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 168 3.6E-12 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 Pfam PF13682 Chemoreceptor zinc-binding domain 372 440 9.8E-9 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 134 274 1.6E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 SUPERFAMILY SSF58104 62 327 9.68E-40 T 14-10-2018 JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 Gene3D G3DSA:1.20.120.30 362 478 6.3E-6 T 14-10-2018 JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 SMART SM00283 67 330 6.5E-21 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 88 117 2.8E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 165 192 2.8E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 223 2.8E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_01390 4d7851f77eebafd76daa25e5c6fcf551 492 Gene3D G3DSA:1.10.287.950 28 339 3.6E-39 T 14-10-2018 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 Gene3D G3DSA:1.25.40.10 2 309 4.8E-58 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 Gene3D G3DSA:1.25.40.10 310 529 1.2E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 Pfam PF13424 Tetratricopeptide repeat 45 105 1.2E-7 T 14-10-2018 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 Pfam PF13424 Tetratricopeptide repeat 112 175 8.2E-10 T 14-10-2018 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SUPERFAMILY SSF48452 5 182 4.17E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 78 111 0.17 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 214 247 0.42 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 454 487 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 248 281 0.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 146 179 2.4E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 352 385 0.34 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 386 419 57.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 420 453 0.41 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 5 38 47.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 112 145 9.2E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 180 213 0.062 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SMART SM00028 44 77 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 Pfam PF13432 Tetratricopeptide repeat 221 281 2.5E-5 T 14-10-2018 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 Pfam PF13181 Tetratricopeptide repeat 421 452 0.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 Pfam PF13181 Tetratricopeptide repeat 183 212 0.0057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SUPERFAMILY SSF48452 143 308 1.01E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05985 14f9dfe018986c8d5680c09b8a1692ff 1084 SUPERFAMILY SSF48452 346 480 1.61E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 258 766 8.6E-135 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 Pfam PF00702 haloacid dehalogenase-like hydrolase 453 678 2.2E-23 T 14-10-2018 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 295 309 4.4E-20 T 14-10-2018 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 700 4.4E-20 T 14-10-2018 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 469 4.4E-20 T 14-10-2018 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 683 4.4E-20 T 14-10-2018 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 696 721 1.2E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 680 1.2E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 Gene3D G3DSA:3.40.50.1000 436 716 7.6E-71 T 14-10-2018 IPR023214 HAD superfamily JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 SUPERFAMILY SSF81665 102 762 4.71E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 SUPERFAMILY SSF56784 454 765 1.01E-47 T 14-10-2018 IPR036412 HAD-like superfamily JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 Gene3D G3DSA:2.70.150.20 237 349 8.4E-24 T 14-10-2018 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 Pfam PF00122 E1-E2 ATPase 261 435 1.7E-37 T 14-10-2018 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 457 463 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 743 2.9E-56 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 Gene3D G3DSA:3.40.1110.10 466 589 7.6E-71 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JO41_04995 421f5aed1e310b18dce7a4acb74fc27d 769 SUPERFAMILY SSF81653 260 345 4.97E-19 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JO41_00980 620c01beb34619a00ad779aaf3fb8dd6 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 5 207 28.421 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO41_00980 620c01beb34619a00ad779aaf3fb8dd6 248 SUPERFAMILY SSF110395 6 245 6.02E-63 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO41_00980 620c01beb34619a00ad779aaf3fb8dd6 248 Pfam PF03932 CutC family 6 204 1.2E-64 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO41_00980 620c01beb34619a00ad779aaf3fb8dd6 248 Gene3D G3DSA:3.20.20.380 4 246 1.8E-80 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 Gene3D G3DSA:3.30.70.270 155 318 1.1E-38 T 14-10-2018 JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 SMART SM00100 17 134 6.8E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 SUPERFAMILY SSF51206 7 138 1.44E-29 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 SUPERFAMILY SSF55073 168 317 3.22E-33 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 SMART SM00267 152 319 8.1E-31 T 14-10-2018 IPR000160 GGDEF domain JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 Pfam PF00027 Cyclic nucleotide-binding domain 37 121 2.8E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 44 60 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 160 317 2.8E-31 T 14-10-2018 IPR000160 GGDEF domain JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 Gene3D G3DSA:2.60.120.10 3 151 1.6E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_05285 c1edc50275438abe898ff3ee4d135f34 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 315 1.9E-31 T 14-10-2018 IPR000160 GGDEF domain JO41_06820 e9b703482e31fe88b71cd1095b795e94 220 Hamap MF_01114 Regulatory protein RecX [recX]. 72 219 12.882 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JO41_06820 e9b703482e31fe88b71cd1095b795e94 220 Pfam PF02631 RecX family 99 213 3.4E-23 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JO41_06820 e9b703482e31fe88b71cd1095b795e94 220 Gene3D G3DSA:1.10.10.10 77 121 2.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_06820 e9b703482e31fe88b71cd1095b795e94 220 Gene3D G3DSA:1.10.10.10 123 167 3.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_09465 ac719aecf4fef52d734372a69524475f 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 2.4E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO41_09465 ac719aecf4fef52d734372a69524475f 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 2.4E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO41_09465 ac719aecf4fef52d734372a69524475f 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 2.4E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO41_09465 ac719aecf4fef52d734372a69524475f 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 2.4E-34 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO41_09465 ac719aecf4fef52d734372a69524475f 344 SUPERFAMILY SSF103039 45 230 2.88E-28 T 14-10-2018 IPR028976 CheC-like superfamily JO41_09465 ac719aecf4fef52d734372a69524475f 344 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 325 3.2E-123 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO41_09465 ac719aecf4fef52d734372a69524475f 344 Gene3D G3DSA:3.40.1550.10 45 231 1.7E-66 T 14-10-2018 IPR028976 CheC-like superfamily JO41_09465 ac719aecf4fef52d734372a69524475f 344 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 324 8.7E-21 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JO41_09465 ac719aecf4fef52d734372a69524475f 344 PIRSF PIRSF002888 1 334 1.1E-116 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO41_09465 ac719aecf4fef52d734372a69524475f 344 Gene3D G3DSA:2.30.330.10 243 332 1.8E-8 T 14-10-2018 IPR036429 SpoA-like superfamily JO41_09465 ac719aecf4fef52d734372a69524475f 344 SUPERFAMILY SSF101801 250 326 3.14E-15 T 14-10-2018 IPR036429 SpoA-like superfamily JO41_09465 ac719aecf4fef52d734372a69524475f 344 Pfam PF02154 Flagellar motor switch protein FliM 39 229 2.2E-86 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JO41_03150 d9469dfd613b4aae35cc1c35d525e98b 365 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 156 240 8.4E-13 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 JO41_03150 d9469dfd613b4aae35cc1c35d525e98b 365 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 127 7.4E-28 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JO41_03150 d9469dfd613b4aae35cc1c35d525e98b 365 Gene3D G3DSA:3.30.360.10 137 344 2.0E-103 T 14-10-2018 JO41_03150 d9469dfd613b4aae35cc1c35d525e98b 365 SUPERFAMILY SSF51735 3 159 6.35E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_03150 d9469dfd613b4aae35cc1c35d525e98b 365 SUPERFAMILY SSF55347 137 327 2.29E-34 T 14-10-2018 JO41_03150 d9469dfd613b4aae35cc1c35d525e98b 365 Gene3D G3DSA:3.40.50.720 4 325 2.0E-103 T 14-10-2018 JO41_08065 d00fb4976fe1bf7e36ba2d7aae1334d8 256 Gene3D G3DSA:3.60.21.10 1 254 3.9E-51 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_08065 d00fb4976fe1bf7e36ba2d7aae1334d8 256 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 200 5.3E-19 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 JO41_08065 d00fb4976fe1bf7e36ba2d7aae1334d8 256 SUPERFAMILY SSF56300 1 249 1.33E-42 T 14-10-2018 JO41_08065 d00fb4976fe1bf7e36ba2d7aae1334d8 256 PIRSF PIRSF000883 1 254 2.2E-37 T 14-10-2018 IPR011152 Phosphoesterase MJ0912 JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 Gene3D G3DSA:1.25.60.10 1 128 4.3E-26 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 Pfam PF01769 Divalent cation transporter 319 441 3.0E-31 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 Gene3D G3DSA:3.10.580.10 130 257 3.8E-43 T 14-10-2018 JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 Pfam PF03448 MgtE intracellular N domain 30 131 2.2E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 Gene3D G3DSA:1.10.357.20 270 448 9.1E-61 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 SUPERFAMILY SSF54631 133 272 5.18E-32 T 14-10-2018 JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 TIGRFAM TIGR00400 mgtE: magnesium transporter 7 448 6.0E-149 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 SMART SM00116 140 193 15.0 T 14-10-2018 IPR000644 CBS domain JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 SMART SM00116 204 252 9.9E-7 T 14-10-2018 IPR000644 CBS domain JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 SUPERFAMILY SSF161093 276 448 7.19E-49 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 SUPERFAMILY SSF158791 8 130 1.57E-28 T 14-10-2018 JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 SMART SM00924 30 133 3.7E-30 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 Pfam PF00571 CBS domain 133 191 3.3E-6 T 14-10-2018 IPR000644 CBS domain JO41_03295 71fdb47ec5fe2f326546ce5e66d688fc 449 Pfam PF00571 CBS domain 200 251 2.3E-6 T 14-10-2018 IPR000644 CBS domain JO41_11705 7677e1af01926a35f4458e556a835202 217 SUPERFAMILY SSF46689 13 79 4.85E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_11705 7677e1af01926a35f4458e556a835202 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_11705 7677e1af01926a35f4458e556a835202 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_11705 7677e1af01926a35f4458e556a835202 217 Gene3D G3DSA:1.10.357.10 10 134 1.3E-20 T 14-10-2018 JO41_11705 7677e1af01926a35f4458e556a835202 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.2E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_03860 41f1cc131f7c76333fe18d51a0fc1993 375 Pfam PF00534 Glycosyl transferases group 1 191 353 7.2E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO41_03860 41f1cc131f7c76333fe18d51a0fc1993 375 Gene3D G3DSA:3.40.50.2000 181 374 4.4E-37 T 14-10-2018 JO41_03860 41f1cc131f7c76333fe18d51a0fc1993 375 Gene3D G3DSA:3.40.50.2000 1 180 9.0E-18 T 14-10-2018 JO41_03860 41f1cc131f7c76333fe18d51a0fc1993 375 Pfam PF13439 Glycosyltransferase Family 4 15 170 1.2E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JO41_03860 41f1cc131f7c76333fe18d51a0fc1993 375 SUPERFAMILY SSF53756 10 373 2.98E-69 T 14-10-2018 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Gene3D G3DSA:3.50.30.10 398 525 4.2E-70 T 14-10-2018 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Gene3D G3DSA:1.20.80.30 116 213 6.3E-95 T 14-10-2018 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 5 890 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 466 477 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Pfam PF00391 PEP-utilising enzyme, mobile domain 437 519 2.3E-27 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Gene3D G3DSA:3.30.470.20 259 356 4.6E-39 T 14-10-2018 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 535 888 5.4E-87 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Gene3D G3DSA:3.20.20.60 548 892 5.1E-145 T 14-10-2018 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 SUPERFAMILY SSF51621 528 890 7.59E-120 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 SUPERFAMILY SSF52009 404 528 1.31E-36 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Gene3D G3DSA:1.10.189.10 360 545 4.2E-70 T 14-10-2018 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 314 371 1.0E-10 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 311 6.0E-40 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 SUPERFAMILY SSF56059 5 388 1.77E-123 T 14-10-2018 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 PIRSF PIRSF000853 3 898 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 777 795 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JO41_10020 60c58d6f2de108a9e870581db7293d24 920 Gene3D G3DSA:3.30.1490.20 16 258 6.3E-95 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 SUPERFAMILY SSF50156 102 203 6.18E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 Pfam PF02163 Peptidase family M50 10 436 9.6E-59 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 Gene3D G3DSA:2.30.42.10 143 219 6.8E-18 T 14-10-2018 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 SUPERFAMILY SSF50156 220 286 3.29E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 146 190 2.0E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 SMART SM00228 117 194 1.1E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 SMART SM00228 195 278 2.1E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_11225 560850456d23ed4b8ffec1afe8a9b4e3 450 Gene3D G3DSA:2.30.42.10 221 308 3.1E-12 T 14-10-2018 JO41_01320 0802cdb53ce7b86083b054315efa2a8c 179 SUPERFAMILY SSF56235 6 179 2.04E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JO41_01320 0802cdb53ce7b86083b054315efa2a8c 179 PIRSF PIRSF039093 2 179 3.9E-88 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JO41_01320 0802cdb53ce7b86083b054315efa2a8c 179 Gene3D G3DSA:3.60.20.10 4 179 1.9E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JO41_01320 0802cdb53ce7b86083b054315efa2a8c 179 Pfam PF00227 Proteasome subunit 8 178 3.3E-25 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 JO41_01320 0802cdb53ce7b86083b054315efa2a8c 179 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 8 179 41.725 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JO41_01320 0802cdb53ce7b86083b054315efa2a8c 179 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 9 179 1.3E-84 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JO41_08480 b4e2e3edd72fd540614138b8235a6fa5 308 Gene3D G3DSA:3.40.50.410 72 258 7.1E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_08480 b4e2e3edd72fd540614138b8235a6fa5 308 SUPERFAMILY SSF53300 73 195 6.16E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_08480 b4e2e3edd72fd540614138b8235a6fa5 308 Pfam PF01882 Protein of unknown function DUF58 37 114 2.3E-20 T 14-10-2018 IPR002881 Domain of unknown function DUF58 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 Pfam PF02938 GAD domain 315 409 4.9E-27 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 562 3.8E-103 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 SUPERFAMILY SSF55261 296 422 7.03E-30 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 SUPERFAMILY SSF50249 6 110 6.09E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 Gene3D G3DSA:3.30.1360.30 279 423 9.8E-188 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 5 588 33.324 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 Gene3D G3DSA:2.40.50.140 2 112 5.5E-35 T 14-10-2018 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 586 3.1E-227 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 SUPERFAMILY SSF55681 119 587 7.37E-104 T 14-10-2018 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 Pfam PF01336 OB-fold nucleic acid binding domain 22 106 2.8E-13 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 Gene3D G3DSA:3.30.930.10 123 585 9.8E-188 T 14-10-2018 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 209 3.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 227 3.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 3.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_02560 eff32df0d1daba1e205e5dcc4bf377c1 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 3.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_01220 b232742a61b045c54b2bf462de3d80ac 149 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 37 139 5.9E-24 T 14-10-2018 IPR018673 Protein of unknown function DUF2141 JO41_04990 cd24c69fb6f9f427b32adebe88163292 866 Pfam PF16323 Domain of unknown function (DUF4959) 27 120 2.8E-7 T 14-10-2018 IPR032527 Domain of unknown function DUF4959 JO41_04990 cd24c69fb6f9f427b32adebe88163292 866 Gene3D G3DSA:2.60.40.10 225 321 1.2E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_04990 cd24c69fb6f9f427b32adebe88163292 866 Gene3D G3DSA:2.60.40.10 36 140 6.5E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_04990 cd24c69fb6f9f427b32adebe88163292 866 Pfam PF07603 Protein of unknown function (DUF1566) 697 862 2.3E-9 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 JO41_04990 cd24c69fb6f9f427b32adebe88163292 866 SMART SM00060 226 306 3.2 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 JO41_04990 cd24c69fb6f9f427b32adebe88163292 866 SMART SM00060 37 119 0.0061 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 JO41_04990 cd24c69fb6f9f427b32adebe88163292 866 SUPERFAMILY SSF49265 30 116 5.3E-8 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 JO41_01240 f00efed7252e02896f46e840ee090246 837 Gene3D G3DSA:3.30.1360.40 240 337 2.2E-202 T 14-10-2018 JO41_01240 f00efed7252e02896f46e840ee090246 837 SUPERFAMILY SSF101904 504 817 1.57E-99 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JO41_01240 f00efed7252e02896f46e840ee090246 837 Gene3D G3DSA:2.120.10.90 501 809 9.7E-111 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JO41_01240 f00efed7252e02896f46e840ee090246 837 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 811 23.72 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JO41_01240 f00efed7252e02896f46e840ee090246 837 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 3.2E-152 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_01240 f00efed7252e02896f46e840ee090246 837 Gene3D G3DSA:1.10.268.10 374 462 2.2E-202 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO41_01240 f00efed7252e02896f46e840ee090246 837 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 13 809 0.0 T 14-10-2018 JO41_01240 f00efed7252e02896f46e840ee090246 837 SMART SM00434 15 469 4.4E-271 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_01240 f00efed7252e02896f46e840ee090246 837 SUPERFAMILY SSF56719 34 492 8.37E-166 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO41_01240 f00efed7252e02896f46e840ee090246 837 Gene3D G3DSA:3.90.199.10 36 491 2.2E-202 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JO41_01240 f00efed7252e02896f46e840ee090246 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 510 552 1.3E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO41_01240 f00efed7252e02896f46e840ee090246 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 710 5.3E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO41_01240 f00efed7252e02896f46e840ee090246 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 607 2.3E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO41_01240 f00efed7252e02896f46e840ee090246 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 616 659 6.9E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO41_01240 f00efed7252e02896f46e840ee090246 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 759 1.5E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO41_01240 f00efed7252e02896f46e840ee090246 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 809 7.3E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 Pfam PF01706 FliG C-terminal domain 236 343 6.0E-44 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 18 353 1.4E-142 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 SUPERFAMILY SSF48029 133 344 4.32E-70 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PIRSF PIRSF003161 18 353 1.4E-118 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 Pfam PF14841 FliG middle domain 134 208 4.0E-32 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 Gene3D G3DSA:1.10.220.30 18 103 1.6E-17 T 14-10-2018 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 Pfam PF14842 FliG N-terminal domain 24 126 7.9E-33 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 Gene3D G3DSA:1.10.220.30 214 353 3.7E-51 T 14-10-2018 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 Gene3D G3DSA:1.10.220.30 122 213 2.3E-35 T 14-10-2018 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 SUPERFAMILY SSF48029 22 132 1.73E-20 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 4.2E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 4.2E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 4.2E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 4.2E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 4.2E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 4.2E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_01350 c2e611980362057b38cbfbc12dcfb18d 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 4.2E-86 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_05780 fce0d7f916519a59f0f1aa52e2a68ae1 308 Gene3D G3DSA:3.40.50.10330 79 144 4.6E-11 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JO41_05780 fce0d7f916519a59f0f1aa52e2a68ae1 308 Gene3D G3DSA:2.60.200.30 145 205 4.6E-11 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO41_05780 fce0d7f916519a59f0f1aa52e2a68ae1 308 Pfam PF01513 ATP-NAD kinase 70 203 1.9E-5 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO41_05780 fce0d7f916519a59f0f1aa52e2a68ae1 308 SUPERFAMILY SSF111331 66 205 4.9E-14 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 Gene3D G3DSA:3.10.350.10 18 71 5.6E-11 T 14-10-2018 IPR036779 LysM domain superfamily JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 Pfam PF01551 Peptidase family M23 173 265 4.1E-17 T 14-10-2018 IPR016047 Peptidase M23 JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 SUPERFAMILY SSF51261 73 266 1.62E-23 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 SMART SM00257 26 70 9.2E-10 T 14-10-2018 IPR018392 LysM domain JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 SMART SM00257 72 116 6.7E-16 T 14-10-2018 IPR018392 LysM domain JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 SUPERFAMILY SSF54106 26 70 2.88E-8 T 14-10-2018 JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 Gene3D G3DSA:2.70.70.10 132 268 1.4E-19 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 Gene3D G3DSA:3.10.350.10 72 130 7.4E-18 T 14-10-2018 IPR036779 LysM domain superfamily JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 Pfam PF01476 LysM domain 73 116 6.3E-15 T 14-10-2018 IPR018392 LysM domain JO41_00695 fa1cab6e65cfa7c97c2eef3b4809a51b 272 Pfam PF01476 LysM domain 28 70 6.6E-11 T 14-10-2018 IPR018392 LysM domain JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 619 4.7E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 SUPERFAMILY SSF58104 417 647 5.23E-45 T 14-10-2018 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 SMART SM00283 404 651 2.9E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 Gene3D G3DSA:1.10.287.950 429 646 7.3E-42 T 14-10-2018 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 3.1E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 3.1E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 3.1E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 579 608 3.1E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 Pfam PF02743 Cache domain 35 269 1.1E-26 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 SUPERFAMILY SSF58104 329 430 4.71E-8 T 14-10-2018 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 SUPERFAMILY SSF103190 62 183 1.94E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 Pfam PF00672 HAMP domain 309 355 2.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 Gene3D G3DSA:3.30.450.20 142 288 2.9E-28 T 14-10-2018 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 Gene3D G3DSA:1.10.287.950 307 422 3.2E-10 T 14-10-2018 JO41_08755 a1861e9efc10bbcb9e2f4c566cbe5c6e 694 SMART SM00304 307 361 4.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_03760 fa2ebab4c3f7622910c1bb66b047e567 74 PIRSF PIRSF037246 1 74 2.4E-36 T 14-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 JO41_03760 fa2ebab4c3f7622910c1bb66b047e567 74 Gene3D G3DSA:2.30.31.70 1 73 2.3E-30 T 14-10-2018 JO41_03760 fa2ebab4c3f7622910c1bb66b047e567 74 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 21 67 5.8E-8 T 14-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 SUPERFAMILY SSF58104 253 570 1.92E-45 T 14-10-2018 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 Gene3D G3DSA:1.10.287.950 230 350 1.5E-7 T 14-10-2018 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 391 541 2.1E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 Gene3D G3DSA:1.10.287.950 351 570 6.0E-41 T 14-10-2018 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 423 450 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 500 529 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 346 375 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05830 22e3eb12becdbef223ae84088b8d747a 616 SMART SM00283 325 572 1.6E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_08530 c2b72ddf7882ead6593ba79687659d87 303 Pfam PF02565 Recombination protein O C terminal 114 166 2.3E-5 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JO41_08530 c2b72ddf7882ead6593ba79687659d87 303 SUPERFAMILY SSF57863 215 289 9.94E-6 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger JO41_08530 c2b72ddf7882ead6593ba79687659d87 303 SUPERFAMILY SSF57863 86 164 3.92E-8 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger JO41_10960 38356fe8ed628236b98f02dfa9766248 902 Pfam PF05226 CHASE2 domain 23 540 1.6E-31 T 14-10-2018 IPR007890 CHASE2 JO41_10960 38356fe8ed628236b98f02dfa9766248 902 SUPERFAMILY SSF55073 636 825 7.53E-52 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_10960 38356fe8ed628236b98f02dfa9766248 902 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 641 814 2.6E-25 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_10960 38356fe8ed628236b98f02dfa9766248 902 SMART SM00044 625 814 8.0E-12 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_10960 38356fe8ed628236b98f02dfa9766248 902 SMART SM01080 29 546 2.7E-11 T 14-10-2018 IPR007890 CHASE2 JO41_10960 38356fe8ed628236b98f02dfa9766248 902 Gene3D G3DSA:3.30.70.1230 635 832 1.9E-61 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_00770 bb91a5a60f69b9b7baca5cd49802ac83 875 SUPERFAMILY SSF53955 47 245 4.5E-52 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO41_00770 bb91a5a60f69b9b7baca5cd49802ac83 875 Gene3D G3DSA:3.40.710.10 346 696 8.1E-65 T 14-10-2018 JO41_00770 bb91a5a60f69b9b7baca5cd49802ac83 875 Pfam PF00905 Penicillin binding protein transpeptidase domain 378 607 5.5E-16 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO41_00770 bb91a5a60f69b9b7baca5cd49802ac83 875 Pfam PF00912 Transglycosylase 70 231 2.4E-47 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_00770 bb91a5a60f69b9b7baca5cd49802ac83 875 SUPERFAMILY SSF56601 348 703 6.53E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO41_00770 bb91a5a60f69b9b7baca5cd49802ac83 875 Gene3D G3DSA:1.10.3810.10 52 248 9.5E-50 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_01990 5477818f97af2b2ad639f0012b2153a4 331 Gene3D G3DSA:3.90.550.10 17 232 2.6E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_01990 5477818f97af2b2ad639f0012b2153a4 331 Pfam PF00535 Glycosyl transferase family 2 22 165 4.7E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO41_01990 5477818f97af2b2ad639f0012b2153a4 331 SUPERFAMILY SSF53448 19 253 3.29E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_02000 f4c9e66596ac448d9326a7e3184b9e82 255 SUPERFAMILY SSF52540 1 248 7.98E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02000 f4c9e66596ac448d9326a7e3184b9e82 255 Gene3D G3DSA:3.40.50.300 1 251 5.0E-44 T 14-10-2018 JO41_02000 f4c9e66596ac448d9326a7e3184b9e82 255 Pfam PF13614 AAA domain 1 150 4.3E-30 T 14-10-2018 IPR025669 AAA domain JO41_01800 cda2fa15e4e8950f38a9bfa5393cda60 177 SUPERFAMILY SSF160369 9 163 3.79E-46 T 14-10-2018 JO41_01800 cda2fa15e4e8950f38a9bfa5393cda60 177 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 138 2.0E-6 T 14-10-2018 JO41_01800 cda2fa15e4e8950f38a9bfa5393cda60 177 Gene3D G3DSA:3.30.70.1730 8 137 2.1E-36 T 14-10-2018 JO41_01800 cda2fa15e4e8950f38a9bfa5393cda60 177 ProSitePatterns PS01109 Ribosomal protein L10 signature. 12 46 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01800 cda2fa15e4e8950f38a9bfa5393cda60 177 Pfam PF00466 Ribosomal protein L10 9 104 5.7E-24 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 JO41_01800 cda2fa15e4e8950f38a9bfa5393cda60 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 7 164 24.736 T 14-10-2018 IPR022973 Ribosomal protein L10 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 Gene3D G3DSA:3.40.190.10 152 401 1.5E-109 T 14-10-2018 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 Gene3D G3DSA:3.40.190.10 60 369 1.5E-109 T 14-10-2018 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 SUPERFAMILY SSF53850 42 405 4.04E-78 T 14-10-2018 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 PRINTS PR00181 Maltose binding protein signature 369 388 2.1E-14 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 PRINTS PR00181 Maltose binding protein signature 164 183 2.1E-14 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 PRINTS PR00181 Maltose binding protein signature 143 162 2.1E-14 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 PRINTS PR00181 Maltose binding protein signature 248 267 2.1E-14 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 146 163 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 JO41_09255 f895fc525368b3cba91b166dc482f8b5 409 Pfam PF13416 Bacterial extracellular solute-binding protein 61 353 1.0E-48 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 SUPERFAMILY SSF58104 335 436 1.31E-7 T 14-10-2018 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 625 7.3E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 SUPERFAMILY SSF103190 75 177 2.28E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 Gene3D G3DSA:1.10.287.950 391 699 1.8E-48 T 14-10-2018 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 Pfam PF02743 Cache domain 41 275 4.8E-23 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 SUPERFAMILY SSF58104 425 654 1.31E-45 T 14-10-2018 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 Gene3D G3DSA:1.20.1480.50 274 372 2.0E-7 T 14-10-2018 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 Gene3D G3DSA:3.30.450.20 35 177 5.2E-15 T 14-10-2018 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 SMART SM00283 410 657 4.0E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_09855 d56fd6ddea9337f77c0cdfc78dca43b5 700 SMART SM00304 313 367 1.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 SMART SM00954 247 357 1.4E-60 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 SUPERFAMILY SSF109604 58 202 4.55E-32 T 14-10-2018 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 SUPERFAMILY SSF81271 387 458 2.45E-17 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 Gene3D G3DSA:3.10.20.30 392 469 7.5E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 Gene3D G3DSA:3.30.460.10 205 337 2.4E-49 T 14-10-2018 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 Gene3D G3DSA:1.10.3210.10 24 203 1.8E-34 T 14-10-2018 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 SUPERFAMILY SSF81301 193 403 2.78E-56 T 14-10-2018 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 Pfam PF04607 Region found in RelA / SpoT proteins 247 356 1.3E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 Pfam PF13328 HD domain 59 187 4.7E-27 T 14-10-2018 IPR003607 HD/PDEase domain JO41_11295 73474f6ab3135f0c8db62ba53547d89b 626 Pfam PF02824 TGS domain 399 458 8.3E-18 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 4.9E-70 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 SUPERFAMILY SSF51905 1 305 1.56E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_00650 d91e2a51ef0065931498609e36af4deb 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 Gene3D G3DSA:3.50.50.60 124 246 1.2E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_00650 d91e2a51ef0065931498609e36af4deb 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 306 2.7E-111 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 Gene3D G3DSA:3.50.50.60 8 300 1.2E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 4.5E-37 T 14-10-2018 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.5E-37 T 14-10-2018 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 4.5E-37 T 14-10-2018 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 4.5E-37 T 14-10-2018 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 4.5E-37 T 14-10-2018 JO41_00650 d91e2a51ef0065931498609e36af4deb 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 295 6.2E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 Gene3D G3DSA:3.90.226.10 199 372 1.9E-85 T 14-10-2018 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 SUPERFAMILY SSF52096 49 381 2.32E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 57 376 2.1E-93 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 Gene3D G3DSA:2.30.42.10 105 198 1.9E-85 T 14-10-2018 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 SMART SM00245 184 375 3.5E-66 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 Gene3D G3DSA:3.30.750.44 51 350 1.9E-85 T 14-10-2018 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 Pfam PF03572 Peptidase family S41 209 372 5.8E-52 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 SMART SM00228 105 183 1.5E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 Pfam PF13180 PDZ domain 105 185 4.9E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_04295 ea677b4d4b1e0205a9b682d9f722b89a 497 SUPERFAMILY SSF50156 75 214 1.16E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO41_04655 2fb90b1cc8fba526b4899979edadc283 742 Pfam PF13519 von Willebrand factor type A domain 559 673 3.8E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_04655 2fb90b1cc8fba526b4899979edadc283 742 SUPERFAMILY SSF53300 553 714 2.91E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_04655 2fb90b1cc8fba526b4899979edadc283 742 SMART SM00327 556 737 9.5E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_04655 2fb90b1cc8fba526b4899979edadc283 742 Gene3D G3DSA:3.40.50.410 558 737 4.8E-11 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 Gene3D G3DSA:3.20.20.10 31 271 2.8E-101 T 14-10-2018 IPR029066 PLP-binding barrel JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01182 Ornithine decarboxylase signature 94 118 8.3E-18 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01182 Ornithine decarboxylase signature 50 77 8.3E-18 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01182 Ornithine decarboxylase signature 330 340 8.3E-18 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01182 Ornithine decarboxylase signature 124 146 8.3E-18 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 3.4E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 3.4E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 259 278 3.4E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 3.4E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 52 70 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 Gene3D G3DSA:2.40.37.10 20 381 2.8E-101 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 268 1.1E-52 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 SUPERFAMILY SSF50621 249 388 1.72E-35 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 269 366 9.6E-19 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 JO41_04750 bb44e5678578eb7bbaddb6bd55fe274d 389 SUPERFAMILY SSF51419 23 271 3.43E-63 T 14-10-2018 IPR029066 PLP-binding barrel JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 SUPERFAMILY SSF51261 66 299 4.08E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 SMART SM00257 113 156 1.5E-9 T 14-10-2018 IPR018392 LysM domain JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 SMART SM00257 63 107 3.6E-10 T 14-10-2018 IPR018392 LysM domain JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 Pfam PF01476 LysM domain 114 156 7.3E-10 T 14-10-2018 IPR018392 LysM domain JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 Pfam PF01476 LysM domain 64 107 4.0E-11 T 14-10-2018 IPR018392 LysM domain JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 Pfam PF01551 Peptidase family M23 201 295 2.9E-30 T 14-10-2018 IPR016047 Peptidase M23 JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 Gene3D G3DSA:3.10.350.10 111 159 5.6E-11 T 14-10-2018 IPR036779 LysM domain superfamily JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 Gene3D G3DSA:3.10.350.10 48 110 9.4E-12 T 14-10-2018 IPR036779 LysM domain superfamily JO41_05495 48d9e25f18faeff84ab74d44fbac465b 300 Gene3D G3DSA:2.70.70.10 160 300 4.2E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_10835 ce7f9f13f38b17f5248dda0f3152b239 698 Gene3D G3DSA:3.20.70.20 163 688 1.2E-114 T 14-10-2018 JO41_10835 ce7f9f13f38b17f5248dda0f3152b239 698 SUPERFAMILY SSF51998 149 684 8.24E-156 T 14-10-2018 JO41_10835 ce7f9f13f38b17f5248dda0f3152b239 698 Pfam PF03477 ATP cone domain 26 119 1.3E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JO41_10835 ce7f9f13f38b17f5248dda0f3152b239 698 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 148 681 1.2E-173 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JO41_10835 ce7f9f13f38b17f5248dda0f3152b239 698 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 147 677 2.2E-144 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JO41_09990 ec4e227e1d03252afc1daa4a7123c1f6 197 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 1 159 0.006 T 14-10-2018 JO41_09990 ec4e227e1d03252afc1daa4a7123c1f6 197 SUPERFAMILY SSF55154 3 161 6.7E-9 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 JO41_09990 ec4e227e1d03252afc1daa4a7123c1f6 197 Gene3D G3DSA:2.40.320.10 1 195 1.5E-23 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 Gene3D G3DSA:3.40.50.300 71 287 1.1E-40 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 PRINTS PR01874 DNA repair protein radA signature 87 115 3.3E-68 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 PRINTS PR01874 DNA repair protein radA signature 254 280 3.3E-68 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 PRINTS PR01874 DNA repair protein radA signature 220 248 3.3E-68 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 PRINTS PR01874 DNA repair protein radA signature 13 37 3.3E-68 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 PRINTS PR01874 DNA repair protein radA signature 181 205 3.3E-68 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 PRINTS PR01874 DNA repair protein radA signature 329 352 3.3E-68 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 Gene3D G3DSA:3.30.230.10 309 466 5.8E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 SUPERFAMILY SSF52540 73 294 1.24E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 457 6.1E-139 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 Pfam PF06745 KaiC 79 156 1.2E-11 T 14-10-2018 IPR014774 KaiC-like domain JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 436 2.6E-15 T 14-10-2018 JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 SMART SM00382 95 251 4.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 SUPERFAMILY SSF54211 261 465 7.97E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_07555 64d6d38cbd3641ad1e664a046361c74c 468 Hamap MF_01498 DNA repair protein RadA [radA]. 24 464 40.674 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JO41_10080 6af84fe33292768b7919c306e9b38608 203 SUPERFAMILY SSF56784 3 195 4.61E-26 T 14-10-2018 IPR036412 HAD-like superfamily JO41_10080 6af84fe33292768b7919c306e9b38608 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 139 188 4.4E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_10080 6af84fe33292768b7919c306e9b38608 203 Gene3D G3DSA:1.10.150.240 18 87 6.9E-33 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JO41_10080 6af84fe33292768b7919c306e9b38608 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 101 187 3.6E-9 T 14-10-2018 JO41_10080 6af84fe33292768b7919c306e9b38608 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 3.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_10080 6af84fe33292768b7919c306e9b38608 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 3.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_10080 6af84fe33292768b7919c306e9b38608 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 3.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_10080 6af84fe33292768b7919c306e9b38608 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 3.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_10080 6af84fe33292768b7919c306e9b38608 203 Gene3D G3DSA:3.40.50.1000 6 187 6.9E-33 T 14-10-2018 IPR023214 HAD superfamily JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 SUPERFAMILY SSF56808 5 222 7.19E-74 T 14-10-2018 IPR023674 Ribosomal protein L1-like JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 ProSitePatterns PS01199 Ribosomal protein L1 signature. 117 135 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 225 36.325 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 Gene3D G3DSA:3.40.50.790 64 155 9.8E-76 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 Pfam PF00687 Ribosomal protein L1p/L10e family 32 216 1.9E-45 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 Gene3D G3DSA:3.30.190.20 24 218 9.8E-76 T 14-10-2018 JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 223 1.6E-93 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JO41_01805 6910272705928ccc47d1a4b61ee7ef00 226 PIRSF PIRSF002155 1 223 3.4E-73 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 SMART SM00387 347 468 5.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 SMART SM00388 238 305 1.1E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 SUPERFAMILY SSF158472 187 234 2.22E-6 T 14-10-2018 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 6.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 6.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 6.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 6.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 SMART SM00304 184 237 1.5E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 SUPERFAMILY SSF55874 294 468 1.83E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 Gene3D G3DSA:1.10.287.130 188 305 1.1E-26 T 14-10-2018 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 Gene3D G3DSA:3.30.565.10 306 468 3.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 305 4.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 SUPERFAMILY SSF47384 221 306 1.47E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 Pfam PF00672 HAMP domain 185 233 3.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06290 6ee52dbb3fcd485fdb8b9a0a96113846 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 468 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_00125 adbace30b1dde663ca7681bfe3073987 491 Gene3D G3DSA:1.10.10.410 428 490 1.2E-24 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JO41_00125 adbace30b1dde663ca7681bfe3073987 491 Pfam PF02637 GatB domain 341 488 7.6E-52 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 6 488 7.8E-168 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 Gene3D G3DSA:1.10.150.380 310 427 1.4E-36 T 14-10-2018 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 151 165 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 SUPERFAMILY SSF89095 310 416 9.59E-32 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 SUPERFAMILY SSF55931 8 306 7.85E-102 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 6 489 35.84 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 SMART SM00845 341 488 1.2E-70 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JO41_00125 adbace30b1dde663ca7681bfe3073987 491 Pfam PF02934 GatB/GatE catalytic domain 9 301 2.9E-105 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 JO41_11810 7d6c7a47760c9f485c51b59fe4f75bf0 688 Pfam PF07695 7TM diverse intracellular signalling 200 389 3.1E-11 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_11810 7d6c7a47760c9f485c51b59fe4f75bf0 688 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 449 612 6.4E-20 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_11810 7d6c7a47760c9f485c51b59fe4f75bf0 688 SUPERFAMILY SSF55073 445 624 1.27E-39 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_11810 7d6c7a47760c9f485c51b59fe4f75bf0 688 SMART SM00044 411 605 1.0E-4 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_11810 7d6c7a47760c9f485c51b59fe4f75bf0 688 Gene3D G3DSA:3.30.70.1230 439 638 3.0E-39 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_11955 085cd3930864b180e4452715b7d433bd 396 Pfam PF00512 His Kinase A (phospho-acceptor) domain 153 217 2.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO41_11955 085cd3930864b180e4452715b7d433bd 396 Gene3D G3DSA:3.30.565.10 225 379 2.3E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_11955 085cd3930864b180e4452715b7d433bd 396 SMART SM00091 28 94 2.1E-7 T 14-10-2018 IPR000014 PAS domain JO41_11955 085cd3930864b180e4452715b7d433bd 396 Pfam PF00989 PAS fold 29 135 9.2E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 JO41_11955 085cd3930864b180e4452715b7d433bd 396 SMART SM00388 153 224 1.9E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JO41_11955 085cd3930864b180e4452715b7d433bd 396 SUPERFAMILY SSF55874 219 373 3.8E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_11955 085cd3930864b180e4452715b7d433bd 396 Gene3D G3DSA:3.30.450.20 20 136 5.4E-16 T 14-10-2018 JO41_11955 085cd3930864b180e4452715b7d433bd 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 318 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_11955 085cd3930864b180e4452715b7d433bd 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_11955 085cd3930864b180e4452715b7d433bd 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 332 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_11955 085cd3930864b180e4452715b7d433bd 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 4.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_11955 085cd3930864b180e4452715b7d433bd 396 SUPERFAMILY SSF55785 19 136 7.5E-14 T 14-10-2018 IPR035965 PAS domain superfamily JO41_11955 085cd3930864b180e4452715b7d433bd 396 Gene3D G3DSA:1.10.287.130 139 221 3.4E-15 T 14-10-2018 JO41_11955 085cd3930864b180e4452715b7d433bd 396 SUPERFAMILY SSF47384 142 220 1.12E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JO41_11955 085cd3930864b180e4452715b7d433bd 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 371 2.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_11955 085cd3930864b180e4452715b7d433bd 396 SMART SM00387 266 373 4.7E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_11955 085cd3930864b180e4452715b7d433bd 396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 142 2.0E-11 T 14-10-2018 IPR000014 PAS domain JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Gene3D G3DSA:1.10.3500.10 125 499 6.8E-130 T 14-10-2018 IPR023323 Tex-like domain superfamily JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 SMART SM00732 331 425 4.1E-27 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 SMART SM00316 643 714 9.7E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 SUPERFAMILY SSF47781 562 626 1.29E-13 T 14-10-2018 IPR010994 RuvA domain 2-like JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 SUPERFAMILY SSF53098 327 469 6.68E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Gene3D G3DSA:1.10.150.310 500 624 1.8E-43 T 14-10-2018 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Pfam PF16921 Tex protein YqgF-like domain 332 452 5.7E-43 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 SUPERFAMILY SSF47781 471 559 9.56E-27 T 14-10-2018 IPR010994 RuvA domain 2-like JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Gene3D G3DSA:3.30.420.140 330 452 6.8E-130 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 SUPERFAMILY SSF158832 16 325 2.22E-88 T 14-10-2018 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Gene3D G3DSA:2.40.50.140 629 717 5.7E-25 T 14-10-2018 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Gene3D G3DSA:1.10.10.650 13 122 3.6E-30 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Pfam PF00575 S1 RNA binding domain 643 714 1.5E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Pfam PF12836 Helix-hairpin-helix motif 492 555 1.7E-27 T 14-10-2018 JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 SUPERFAMILY SSF50249 629 730 1.72E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_05045 4565cfbfb4a35fff26fd0c9ed0433fe8 801 Pfam PF09371 Tex-like protein N-terminal domain 22 209 3.6E-54 T 14-10-2018 IPR018974 Tex-like protein, N-terminal JO41_00765 962be00fb48b7c2e71241449e780a611 617 SUPERFAMILY SSF49303 237 300 2.01E-8 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JO41_00765 962be00fb48b7c2e71241449e780a611 617 Gene3D G3DSA:2.60.40.10 191 299 1.1E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_00765 962be00fb48b7c2e71241449e780a611 617 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 339 481 9.5E-5 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO41_00765 962be00fb48b7c2e71241449e780a611 617 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 40 185 8.0E-15 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JO41_00765 962be00fb48b7c2e71241449e780a611 617 SUPERFAMILY SSF51445 296 587 1.19E-53 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_00765 962be00fb48b7c2e71241449e780a611 617 Pfam PF00703 Glycosyl hydrolases family 2 192 299 2.7E-7 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00765 962be00fb48b7c2e71241449e780a611 617 Gene3D G3DSA:3.20.20.80 308 593 2.3E-47 T 14-10-2018 JO41_00765 962be00fb48b7c2e71241449e780a611 617 SUPERFAMILY SSF49785 24 190 5.53E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JO41_00765 962be00fb48b7c2e71241449e780a611 617 Gene3D G3DSA:2.60.120.260 27 190 1.8E-35 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JO41_09825 d42d00154fbfa31221f587184e02ac95 210 Pfam PF01386 Ribosomal L25p family 6 93 2.2E-20 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO41_09825 d42d00154fbfa31221f587184e02ac95 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 181 6.4E-23 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain JO41_09825 d42d00154fbfa31221f587184e02ac95 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 96 2.0E-21 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO41_09825 d42d00154fbfa31221f587184e02ac95 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 180 1.8E-50 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO41_09825 d42d00154fbfa31221f587184e02ac95 210 SUPERFAMILY SSF50715 11 182 7.15E-48 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_09825 d42d00154fbfa31221f587184e02ac95 210 Gene3D G3DSA:2.40.240.10 4 96 8.0E-22 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_09825 d42d00154fbfa31221f587184e02ac95 210 Gene3D G3DSA:2.170.120.20 100 189 1.4E-23 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal JO41_09825 d42d00154fbfa31221f587184e02ac95 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 184 24.232 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JO41_03485 f0519c626ed16ced632436cd949994cf 278 Pfam PF02511 Thymidylate synthase complementing protein 26 225 1.3E-54 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JO41_03485 f0519c626ed16ced632436cd949994cf 278 SUPERFAMILY SSF69796 15 240 8.76E-68 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JO41_03485 f0519c626ed16ced632436cd949994cf 278 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 20 239 29.788 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JO41_03485 f0519c626ed16ced632436cd949994cf 278 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 24 231 7.7E-64 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JO41_03485 f0519c626ed16ced632436cd949994cf 278 Gene3D G3DSA:3.30.1360.170 8 246 7.0E-72 T 14-10-2018 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 Gene3D G3DSA:1.10.287.950 431 649 1.6E-39 T 14-10-2018 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 Gene3D G3DSA:1.10.287.950 310 427 1.3E-8 T 14-10-2018 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 SMART SM00304 309 363 3.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 SUPERFAMILY SSF58104 331 647 2.88E-46 T 14-10-2018 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 Pfam PF02743 Cache domain 41 275 1.9E-23 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 Pfam PF00672 HAMP domain 311 355 5.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 Gene3D G3DSA:3.30.450.20 150 291 4.6E-16 T 14-10-2018 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 SMART SM00283 406 653 6.5E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 621 3.3E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_02705 a1733aa5225b04e0f86522c78e7305a4 697 SUPERFAMILY SSF103190 57 176 1.94E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Pfam PF13484 4Fe-4S double cluster binding domain 696 764 1.3E-10 T 14-10-2018 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 SUPERFAMILY SSF52922 260 421 6.28E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1081 3.0E-10 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Gene3D G3DSA:3.40.50.920 260 422 8.5E-62 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 SUPERFAMILY SSF52518 5 259 1.85E-73 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 SUPERFAMILY SSF52518 802 1182 9.47E-127 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Pfam PF10371 Domain of unknown function 634 685 3.4E-19 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 PIRSF PIRSF000159 1 1184 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 SMART SM00890 629 686 2.0E-24 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1181 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Gene3D G3DSA:3.40.50.970 3 259 5.4E-105 T 14-10-2018 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 433 616 5.5E-29 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 248 4.2E-82 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Gene3D G3DSA:3.30.70.20 676 798 1.5E-39 T 14-10-2018 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Gene3D G3DSA:3.40.50.970 802 1182 4.4E-158 T 14-10-2018 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Gene3D G3DSA:3.40.920.10 423 631 3.6E-87 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 SUPERFAMILY SSF53323 423 675 6.15E-83 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 354 1.1E-15 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 SUPERFAMILY SSF54862 672 844 1.23E-21 T 14-10-2018 JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 752 763 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_07920 e9bd5a6e353020018dabff72ac0c77be 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 696 707 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_12510 e78dbdb520be5fd061b77a12879d67be 226 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_12510 e78dbdb520be5fd061b77a12879d67be 226 SMART SM00382 34 224 3.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_12510 e78dbdb520be5fd061b77a12879d67be 226 SUPERFAMILY SSF52540 5 223 1.06E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12510 e78dbdb520be5fd061b77a12879d67be 226 Gene3D G3DSA:3.40.50.300 3 225 7.5E-59 T 14-10-2018 JO41_12510 e78dbdb520be5fd061b77a12879d67be 226 Pfam PF00005 ABC transporter 25 173 1.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09115 b5597c3da3feed02f88e672356841952 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 187 7.6E-33 T 14-10-2018 JO41_09115 b5597c3da3feed02f88e672356841952 220 SUPERFAMILY SSF56784 1 216 9.59E-55 T 14-10-2018 IPR036412 HAD-like superfamily JO41_09115 b5597c3da3feed02f88e672356841952 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 181 3.7E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_09115 b5597c3da3feed02f88e672356841952 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 5.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_09115 b5597c3da3feed02f88e672356841952 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 5.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_09115 b5597c3da3feed02f88e672356841952 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 5.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_09115 b5597c3da3feed02f88e672356841952 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 187 6.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_09115 b5597c3da3feed02f88e672356841952 220 Gene3D G3DSA:1.10.150.240 17 86 1.4E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JO41_09115 b5597c3da3feed02f88e672356841952 220 Gene3D G3DSA:3.40.50.1000 5 208 1.4E-52 T 14-10-2018 IPR023214 HAD superfamily JO41_09075 da3508c128bfd05cff7dbdd1254efef1 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 12 366 4.7E-66 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 JO41_08665 acc97753f6466438688a57de4b5bf9b5 371 Gene3D G3DSA:3.60.150.10 1 371 2.3E-116 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO41_08665 acc97753f6466438688a57de4b5bf9b5 371 PIRSF PIRSF001456 3 371 2.8E-109 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO41_08665 acc97753f6466438688a57de4b5bf9b5 371 SUPERFAMILY SSF103263 4 366 4.84E-105 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO41_08665 acc97753f6466438688a57de4b5bf9b5 371 Pfam PF01264 Chorismate synthase 10 361 2.5E-110 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO41_08665 acc97753f6466438688a57de4b5bf9b5 371 Hamap MF_00300 Chorismate synthase [aroC]. 10 368 30.812 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO41_08665 acc97753f6466438688a57de4b5bf9b5 371 TIGRFAM TIGR00033 aroC: chorismate synthase 10 365 7.4E-99 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO41_08665 acc97753f6466438688a57de4b5bf9b5 371 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 Gene3D G3DSA:3.40.50.620 18 219 2.0E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 Pfam PF01171 PP-loop family 25 210 3.6E-49 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 364 21.414 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 214 3.0E-49 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 435 477 3.4E-11 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 Pfam PF11734 TilS substrate C-terminal domain 435 477 1.2E-5 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 SUPERFAMILY SSF56037 420 478 1.28E-7 T 14-10-2018 JO41_09830 c47ea4ac1502ba3d935f8418eda93b41 505 SUPERFAMILY SSF52402 24 237 6.4E-47 T 14-10-2018 JO41_01230 9c0216c940d66b60614ebb8804161946 210 Pfam PF13305 WHG domain 91 175 8.8E-10 T 14-10-2018 IPR025996 WHG domain JO41_01230 9c0216c940d66b60614ebb8804161946 210 SUPERFAMILY SSF46689 6 86 2.82E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_01230 9c0216c940d66b60614ebb8804161946 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 5.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_01230 9c0216c940d66b60614ebb8804161946 210 Gene3D G3DSA:1.10.357.10 3 195 7.4E-34 T 14-10-2018 JO41_01230 9c0216c940d66b60614ebb8804161946 210 SUPERFAMILY SSF48498 84 194 4.67E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 SUPERFAMILY SSF52540 323 563 9.8E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 Gene3D G3DSA:1.20.1560.10 5 297 2.2E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 SMART SM00382 353 539 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 SUPERFAMILY SSF90123 12 475 1.83E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 Pfam PF00664 ABC transporter transmembrane region 16 285 8.8E-23 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 Pfam PF00005 ABC transporter 344 492 5.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04940 26d22399ae4f8642b605abd0e2fd3214 572 Gene3D G3DSA:3.40.50.300 319 570 1.9E-85 T 14-10-2018 JO41_02695 5d8c0165e33398599603d05f910d83f8 223 SUPERFAMILY SSF48452 99 216 7.05E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_02695 5d8c0165e33398599603d05f910d83f8 223 SMART SM00028 101 134 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_02695 5d8c0165e33398599603d05f910d83f8 223 SMART SM00028 138 171 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_02695 5d8c0165e33398599603d05f910d83f8 223 SMART SM00028 174 207 0.17 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_02695 5d8c0165e33398599603d05f910d83f8 223 Gene3D G3DSA:1.25.40.10 167 221 1.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_02695 5d8c0165e33398599603d05f910d83f8 223 Gene3D G3DSA:1.25.40.10 74 166 2.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_02695 5d8c0165e33398599603d05f910d83f8 223 Pfam PF13174 Tetratricopeptide repeat 176 207 2.3E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Pfam PF00691 OmpA family 1257 1339 4.8E-13 T 14-10-2018 IPR006665 OmpA-like domain JO41_05840 06cd09f382610beba768bccd1062999a 1355 Gene3D G3DSA:2.60.40.4070 375 456 2.8E-5 T 14-10-2018 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Gene3D G3DSA:2.60.40.4070 596 668 1.0E-6 T 14-10-2018 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Gene3D G3DSA:2.60.40.4070 695 779 5.7E-7 T 14-10-2018 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Gene3D G3DSA:2.60.40.4070 816 892 4.7E-5 T 14-10-2018 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Gene3D G3DSA:2.60.40.4070 917 994 1.1E-10 T 14-10-2018 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Gene3D G3DSA:2.60.40.4070 489 565 6.3E-11 T 14-10-2018 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Pfam PF13860 FlgD Ig-like domain 504 556 2.4E-8 T 14-10-2018 IPR025965 FlgD Ig-like domain JO41_05840 06cd09f382610beba768bccd1062999a 1355 Pfam PF13860 FlgD Ig-like domain 932 984 1.8E-7 T 14-10-2018 IPR025965 FlgD Ig-like domain JO41_05840 06cd09f382610beba768bccd1062999a 1355 Pfam PF13750 Bacterial Ig-like domain (group 3) 435 472 0.0057 T 14-10-2018 IPR022038 Bacterial Ig-like domain JO41_05840 06cd09f382610beba768bccd1062999a 1355 SUPERFAMILY SSF103088 1253 1353 2.22E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_05840 06cd09f382610beba768bccd1062999a 1355 Pfam PF13585 C-terminal domain of CHU protein family 584 654 1.4E-6 T 14-10-2018 JO41_05840 06cd09f382610beba768bccd1062999a 1355 Gene3D G3DSA:3.30.1330.60 1217 1355 6.4E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 12 479 32.684 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 14 473 2.1E-138 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 SUPERFAMILY SSF53623 102 303 2.18E-39 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 Gene3D G3DSA:3.40.50.720 7 103 6.9E-22 T 14-10-2018 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 SUPERFAMILY SSF53244 330 473 8.55E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 Pfam PF01225 Mur ligase family, catalytic domain 14 116 5.4E-19 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 Gene3D G3DSA:3.40.1190.10 105 328 1.0E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 Gene3D G3DSA:3.90.190.20 329 481 3.9E-52 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 Pfam PF08245 Mur ligase middle domain 120 301 1.9E-15 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 414 8.3E-20 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JO41_08040 1f8a1e2b3728c0a86c8d563e5589d6bf 483 SUPERFAMILY SSF51984 14 102 6.67E-18 T 14-10-2018 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.3E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 2.1E-69 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 SUPERFAMILY SSF52440 1 113 6.19E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 SUPERFAMILY SSF56059 83 344 5.72E-61 T 14-10-2018 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 Pfam PF02785 Biotin carboxylase C-terminal domain 342 431 1.4E-25 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 Gene3D G3DSA:3.30.470.130 1 437 4.4E-169 T 14-10-2018 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 SUPERFAMILY SSF51246 330 436 2.98E-30 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JO41_06720 56454bb03a73518ef1fdf99d34f79c57 440 SMART SM00878 335 433 1.1E-36 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 PIRSF PIRSF001400 1 429 3.5E-193 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 SUPERFAMILY SSF51604 139 428 2.58E-126 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 SMART SM01192 139 429 5.4E-209 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 SUPERFAMILY SSF54826 4 136 2.06E-57 T 14-10-2018 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 Gene3D G3DSA:3.20.20.120 128 431 1.2E-138 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 1.9E-131 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 SMART SM01193 4 134 1.0E-98 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 Pfam PF03952 Enolase, N-terminal domain 4 134 1.8E-61 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 PRINTS PR00148 Enolase signature 367 384 2.8E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 PRINTS PR00148 Enolase signature 338 352 2.8E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 PRINTS PR00148 Enolase signature 161 174 2.8E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 PRINTS PR00148 Enolase signature 315 326 2.8E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 PRINTS PR00148 Enolase signature 107 123 2.8E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 PRINTS PR00148 Enolase signature 37 51 2.8E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 ProSitePatterns PS00164 Enolase signature. 338 351 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 Gene3D G3DSA:3.30.390.10 1 127 3.3E-57 T 14-10-2018 IPR029017 Enolase-like, N-terminal JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.1E-217 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_08960 2a82d76515b2bdf20c52eaef9a23a196 432 Hamap MF_00318 Enolase [eno]. 2 415 45.083 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 Gene3D G3DSA:3.90.79.20 1 123 1.6E-15 T 14-10-2018 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 PRINTS PR00502 NUDIX hydrolase family signature 166 181 4.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 PRINTS PR00502 NUDIX hydrolase family signature 152 166 4.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 ProSitePatterns PS00893 Nudix box signature. 157 178 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 Gene3D G3DSA:3.90.79.10 124 247 7.4E-38 T 14-10-2018 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 Pfam PF00293 NUDIX domain 129 233 3.4E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 120 1.8E-6 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 JO41_03200 7358b972cf2766c062c3c17c8630fedd 248 SUPERFAMILY SSF55811 76 237 5.96E-39 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JO41_01010 7c2cc83cdb020fdf5404e77d24a46c4f 457 Pfam PF00474 Sodium:solute symporter family 33 414 2.2E-24 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JO41_01010 7c2cc83cdb020fdf5404e77d24a46c4f 457 Gene3D G3DSA:1.20.1730.10 19 456 3.2E-49 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Gene3D G3DSA:3.40.50.300 412 593 6.8E-49 T 14-10-2018 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 SMART SM00490 457 543 4.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Pfam PF02151 UvrB/uvrC motif 625 659 2.3E-5 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 658 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 SMART SM00487 8 423 9.8E-21 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 SUPERFAMILY SSF52540 35 583 1.33E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Pfam PF00271 Helicase conserved C-terminal domain 429 542 2.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 660 42.207 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Pfam PF12344 Ultra-violet resistance protein B 549 590 7.0E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Gene3D G3DSA:3.40.50.300 247 411 3.3E-49 T 14-10-2018 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Gene3D G3DSA:3.40.50.300 3 161 4.1E-71 T 14-10-2018 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Gene3D G3DSA:3.30.2060.10 162 243 2.3E-20 T 14-10-2018 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Pfam PF04851 Type III restriction enzyme, res subunit 15 85 5.8E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 Gene3D G3DSA:4.10.860.10 609 661 1.4E-7 T 14-10-2018 JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 SUPERFAMILY SSF52540 1 412 1.35E-129 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02895 b4a5525b5f745e1f8a2f862ccbee9237 663 SUPERFAMILY SSF46600 613 659 2.62E-9 T 14-10-2018 IPR036876 UVR domain superfamily JO41_03780 81a0831f76f57479a8ca49119e89b1e7 157 SUPERFAMILY SSF69765 1 156 1.31E-58 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO41_03780 81a0831f76f57479a8ca49119e89b1e7 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 34.211 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO41_03780 81a0831f76f57479a8ca49119e89b1e7 157 Pfam PF02542 YgbB family 2 155 2.2E-58 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO41_03780 81a0831f76f57479a8ca49119e89b1e7 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO41_03780 81a0831f76f57479a8ca49119e89b1e7 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 1.0E-60 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO41_03780 81a0831f76f57479a8ca49119e89b1e7 157 Gene3D G3DSA:3.30.1330.50 1 157 4.8E-63 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JO41_06535 6bb54c723633bcc09d60d07aa26a24fa 336 Gene3D G3DSA:2.60.120.10 5 112 2.4E-17 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_06535 6bb54c723633bcc09d60d07aa26a24fa 336 SUPERFAMILY SSF51206 5 117 1.28E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_06535 6bb54c723633bcc09d60d07aa26a24fa 336 Gene3D G3DSA:1.25.40.10 213 326 9.0E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_06535 6bb54c723633bcc09d60d07aa26a24fa 336 SMART SM00028 285 318 0.006 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06535 6bb54c723633bcc09d60d07aa26a24fa 336 SMART SM00028 212 245 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06535 6bb54c723633bcc09d60d07aa26a24fa 336 Pfam PF00027 Cyclic nucleotide-binding domain 5 92 4.8E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_06535 6bb54c723633bcc09d60d07aa26a24fa 336 SUPERFAMILY SSF48452 211 314 7.59E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_01905 34951d10979c9e897534c36740a73feb 485 Gene3D G3DSA:3.40.50.300 258 484 2.4E-49 T 14-10-2018 JO41_01905 34951d10979c9e897534c36740a73feb 485 Pfam PF00005 ABC transporter 19 170 5.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_01905 34951d10979c9e897534c36740a73feb 485 SUPERFAMILY SSF52540 257 472 2.03E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01905 34951d10979c9e897534c36740a73feb 485 Pfam PF00005 ABC transporter 277 417 4.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_01905 34951d10979c9e897534c36740a73feb 485 SUPERFAMILY SSF52540 1 225 2.43E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01905 34951d10979c9e897534c36740a73feb 485 Gene3D G3DSA:3.40.50.300 1 243 3.2E-53 T 14-10-2018 JO41_01905 34951d10979c9e897534c36740a73feb 485 ProSitePatterns PS00211 ABC transporters family signature. 389 403 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_01905 34951d10979c9e897534c36740a73feb 485 SMART SM00382 28 234 6.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01905 34951d10979c9e897534c36740a73feb 485 SMART SM00382 286 464 2.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09540 85f7854073ad69d83d097e4222edad36 1211 Gene3D G3DSA:1.25.40.10 748 1001 6.7E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 Gene3D G3DSA:1.25.40.10 1002 1191 1.1E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 Gene3D G3DSA:1.25.40.10 669 745 4.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 SMART SM00028 1061 1094 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 SMART SM00028 901 934 0.042 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 SMART SM00028 946 979 60.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 SMART SM00028 677 710 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 SMART SM00028 1027 1060 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 SUPERFAMILY SSF48452 889 1092 6.26E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 SUPERFAMILY SSF48452 677 930 1.55E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09540 85f7854073ad69d83d097e4222edad36 1211 Pfam PF13174 Tetratricopeptide repeat 678 703 0.01 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SUPERFAMILY SSF52980 393 450 1.98E-5 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Pfam PF13432 Tetratricopeptide repeat 209 264 3.3E-4 T 14-10-2018 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Pfam PF13432 Tetratricopeptide repeat 39 85 2.6E-7 T 14-10-2018 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Gene3D G3DSA:1.25.40.10 235 331 2.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Gene3D G3DSA:1.25.40.10 173 234 1.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SUPERFAMILY SSF48452 104 266 5.06E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Gene3D G3DSA:1.25.40.10 108 172 3.1E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SUPERFAMILY SSF48452 39 131 1.75E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Pfam PF04471 Restriction endonuclease 394 450 1.4E-5 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Gene3D G3DSA:1.25.40.10 36 107 1.0E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SMART SM00028 63 96 480.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SMART SM00028 135 168 1.5E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SMART SM00028 169 202 0.84 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SMART SM00028 277 310 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SMART SM00028 203 236 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 SMART SM00028 237 270 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04820 cc062e870e9b5ca4f2c2e03d25ca1120 456 Pfam PF13414 TPR repeat 147 181 1.4E-6 T 14-10-2018 JO41_03530 4fa374483bb1ab5c89242517165af399 544 Gene3D G3DSA:3.30.260.10 135 409 2.1E-233 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JO41_03530 4fa374483bb1ab5c89242517165af399 544 SUPERFAMILY SSF54849 136 204 1.24E-18 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JO41_03530 4fa374483bb1ab5c89242517165af399 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 6.4E-261 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_03530 4fa374483bb1ab5c89242517165af399 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 41.849 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_03530 4fa374483bb1ab5c89242517165af399 544 SUPERFAMILY SSF52029 183 375 1.1E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily JO41_03530 4fa374483bb1ab5c89242517165af399 544 SUPERFAMILY SSF48592 6 521 7.66E-75 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily JO41_03530 4fa374483bb1ab5c89242517165af399 544 Gene3D G3DSA:1.10.560.10 7 521 2.1E-233 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily JO41_03530 4fa374483bb1ab5c89242517165af399 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_03530 4fa374483bb1ab5c89242517165af399 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 2.0E-99 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 JO41_03530 4fa374483bb1ab5c89242517165af399 544 Gene3D G3DSA:3.50.7.10 191 371 2.1E-233 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily JO41_03530 4fa374483bb1ab5c89242517165af399 544 PRINTS PR00298 60kDa chaperonin signature 82 109 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_03530 4fa374483bb1ab5c89242517165af399 544 PRINTS PR00298 60kDa chaperonin signature 397 418 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_03530 4fa374483bb1ab5c89242517165af399 544 PRINTS PR00298 60kDa chaperonin signature 349 374 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_03530 4fa374483bb1ab5c89242517165af399 544 PRINTS PR00298 60kDa chaperonin signature 267 290 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_03530 4fa374483bb1ab5c89242517165af399 544 PRINTS PR00298 60kDa chaperonin signature 26 52 1.3E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 SUPERFAMILY SSF51161 289 423 4.59E-23 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 Pfam PF00483 Nucleotidyl transferase 6 270 3.3E-64 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 Gene3D G3DSA:2.160.10.10 291 423 3.7E-35 T 14-10-2018 JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 389 1.2E-135 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 SUPERFAMILY SSF53448 3 386 9.62E-75 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 Gene3D G3DSA:3.90.550.10 1 290 8.6E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_01645 24bc87021573bf5e5cddc94bbab386bb 423 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Gene3D G3DSA:3.10.20.310 105 182 1.3E-13 T 14-10-2018 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 801 4.3E-159 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Pfam PF01103 Surface antigen 462 792 1.1E-40 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 PIRSF PIRSF006076 1 810 2.3E-157 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Gene3D G3DSA:3.10.20.310 358 432 4.3E-22 T 14-10-2018 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Gene3D G3DSA:3.10.20.310 274 356 1.2E-12 T 14-10-2018 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Gene3D G3DSA:3.10.20.310 183 273 4.7E-15 T 14-10-2018 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Pfam PF07244 Surface antigen variable number repeat 187 273 1.8E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Pfam PF07244 Surface antigen variable number repeat 278 354 3.7E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Pfam PF07244 Surface antigen variable number repeat 106 182 1.1E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Pfam PF07244 Surface antigen variable number repeat 32 104 2.9E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Pfam PF07244 Surface antigen variable number repeat 358 430 4.5E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Gene3D G3DSA:2.40.160.50 433 793 1.4E-17 T 14-10-2018 JO41_02330 30d24616743485abfe442bda82eb3d0e 813 Gene3D G3DSA:3.10.20.310 31 104 5.7E-6 T 14-10-2018 JO41_11655 5a3a51a30257539c1e3dbddbd6e8b6fd 431 Pfam PF03313 Serine dehydratase alpha chain 90 424 1.5E-58 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit JO41_11655 5a3a51a30257539c1e3dbddbd6e8b6fd 431 PIRSF PIRSF006054 6 431 8.8E-137 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 JO41_11655 5a3a51a30257539c1e3dbddbd6e8b6fd 431 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 7 429 33.308 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 JO41_10420 913b8680d7a017b8d4cd78766d3dbcd0 194 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 7 189 6.4E-40 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_10420 913b8680d7a017b8d4cd78766d3dbcd0 194 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 9 190 3.5E-56 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 SMART SM00853 492 625 7.2E-26 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 243 347 1.7E-24 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Pfam PF08676 MutL C terminal dimerisation domain 492 622 3.4E-28 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 SUPERFAMILY SSF118116 490 666 1.83E-31 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 SUPERFAMILY SSF54211 212 348 2.43E-22 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 52 143 8.2E-10 T 14-10-2018 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 SUPERFAMILY SSF55874 29 231 6.42E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 29 326 5.1E-83 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 120 126 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Gene3D G3DSA:2.30.42.20 493 666 1.3E-38 T 14-10-2018 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 SMART SM01340 230 348 3.0E-28 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Gene3D G3DSA:3.30.230.10 239 346 1.1E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Gene3D G3DSA:3.30.1370.100 533 622 1.3E-38 T 14-10-2018 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 28 664 21.912 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 JO41_06975 db33a5db12c06df3c38c18f60169bb54 667 Gene3D G3DSA:3.30.565.10 28 228 1.6E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_03520 ee74ce7eb0f32174d652f996e97a7a1e 88 SUPERFAMILY SSF54928 4 85 1.34E-31 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 JO41_03520 ee74ce7eb0f32174d652f996e97a7a1e 88 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 75 7.8E-24 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 JO41_03520 ee74ce7eb0f32174d652f996e97a7a1e 88 Gene3D G3DSA:3.30.70.330 1 87 1.2E-30 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JO41_03520 ee74ce7eb0f32174d652f996e97a7a1e 88 SMART SM00360 4 77 1.0E-28 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 SMART SM00382 37 179 1.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 7.8E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 7.8E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 Gene3D G3DSA:3.40.50.300 13 177 2.8E-98 T 14-10-2018 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 3.1E-135 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 Pfam PF13177 DNA polymerase III, delta subunit 21 176 1.2E-45 T 14-10-2018 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 SUPERFAMILY SSF52540 34 223 5.43E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 368 1.2E-10 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 SUPERFAMILY SSF48019 245 367 7.82E-15 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JO41_10515 0ec9a9e75dea2c7d0f67efcb8b6f8a2a 416 Gene3D G3DSA:1.10.8.60 11 239 2.8E-98 T 14-10-2018 JO41_02040 5d81c43ad37eaaa08746b5c686ae6b46 292 SMART SM00470 25 116 5.7E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JO41_02040 5d81c43ad37eaaa08746b5c686ae6b46 292 Pfam PF02195 ParB-like nuclease domain 46 109 1.3E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JO41_02040 5d81c43ad37eaaa08746b5c686ae6b46 292 SUPERFAMILY SSF110849 44 137 1.03E-14 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 Gene3D G3DSA:3.90.1170.30 336 426 4.5E-140 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 Gene3D G3DSA:1.20.970.10 1 71 1.7E-27 T 14-10-2018 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 SMART SM00941 350 424 1.7E-21 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 SUPERFAMILY SSF54680 337 438 1.7E-21 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 2.0E-20 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 PIRSF PIRSF000478 1 440 3.3E-165 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 422 3.1E-170 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 SUPERFAMILY SSF47648 1 74 5.76E-19 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 Gene3D G3DSA:3.40.1030.10 82 335 4.5E-140 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 115 130 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 Pfam PF00591 Glycosyl transferase family, a/b domain 82 311 1.2E-44 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 71 1.1E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_06265 764dc91bc212d59e2e05c15f5fd8a651 443 SUPERFAMILY SSF52418 74 327 4.32E-87 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_09910 d1df9dc133ffcd6bae24532174985805 441 Gene3D G3DSA:1.20.1270.370 189 228 1.4E-5 T 14-10-2018 JO41_09910 d1df9dc133ffcd6bae24532174985805 441 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 52 408 9.3E-88 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit JO41_09910 d1df9dc133ffcd6bae24532174985805 441 Gene3D G3DSA:3.40.50.11890 127 188 1.4E-5 T 14-10-2018 JO41_09910 d1df9dc133ffcd6bae24532174985805 441 Gene3D G3DSA:3.40.50.11900 308 419 1.7E-10 T 14-10-2018 JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Pfam PF07495 Y_Y_Y domain 716 771 2.3E-11 T 14-10-2018 IPR011123 Two component regulator three Y JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Pfam PF07494 Two component regulator propeller 120 141 0.014 T 14-10-2018 IPR011110 Two component regulator propeller JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Pfam PF07494 Two component regulator propeller 452 469 0.0016 T 14-10-2018 IPR011110 Two component regulator propeller JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Gene3D G3DSA:3.30.70.270 818 997 4.2E-47 T 14-10-2018 JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 SMART SM00267 819 994 3.5E-49 T 14-10-2018 IPR000160 GGDEF domain JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 SUPERFAMILY SSF55073 835 995 2.2E-40 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 SUPERFAMILY SSF50998 41 325 8.63E-11 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 SUPERFAMILY SSF63829 419 613 3.43E-14 T 14-10-2018 JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 827 993 9.5E-47 T 14-10-2018 IPR000160 GGDEF domain JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Pfam PF00990 Diguanylate cyclase, GGDEF domain 831 990 6.1E-42 T 14-10-2018 IPR000160 GGDEF domain JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Gene3D G3DSA:2.130.10.10 27 330 2.9E-46 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Gene3D G3DSA:2.130.10.10 350 572 5.2E-46 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO41_02660 77554bf5126c1225b56a69117bc6b44d 1005 Gene3D G3DSA:2.60.40.10 662 776 8.4E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_05095 df4bb5211e5350beabe8d22e29ec0730 291 Gene3D G3DSA:3.80.30.30 49 190 6.7E-7 T 14-10-2018 JO41_05095 df4bb5211e5350beabe8d22e29ec0730 291 SUPERFAMILY SSF102114 17 197 1.22E-9 T 14-10-2018 JO41_05095 df4bb5211e5350beabe8d22e29ec0730 291 Pfam PF04055 Radical SAM superfamily 17 180 5.2E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_10255 9b886786cccb0943310bb39287c76de6 524 Pfam PF00342 Phosphoglucose isomerase 50 509 3.5E-125 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 3.3E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 3.3E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 451 469 3.3E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 483 3.3E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 337 358 3.3E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 496 3.3E-42 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 483 500 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 SUPERFAMILY SSF53697 20 509 4.67E-145 T 14-10-2018 JO41_10255 9b886786cccb0943310bb39287c76de6 524 Gene3D G3DSA:3.40.50.10490 95 290 8.6E-157 T 14-10-2018 JO41_10255 9b886786cccb0943310bb39287c76de6 524 Gene3D G3DSA:3.40.50.10490 30 491 8.6E-157 T 14-10-2018 JO41_10255 9b886786cccb0943310bb39287c76de6 524 Gene3D G3DSA:1.10.1390.10 492 514 4.9E-7 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10255 9b886786cccb0943310bb39287c76de6 524 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 510 36.082 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_06235 e65d1f89a611cb494393f664c6016416 307 Gene3D G3DSA:1.25.40.10 204 307 8.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04210 d7fbbe576d925ccd9f1a1c66feceb902 136 SUPERFAMILY SSF103481 62 135 3.66E-15 T 14-10-2018 JO41_04210 d7fbbe576d925ccd9f1a1c66feceb902 136 Pfam PF00892 EamA-like transporter family 2 135 5.0E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO41_09630 62891de58325527e10e161d004cdacd0 317 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 80 293 3.2E-74 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JO41_09630 62891de58325527e10e161d004cdacd0 317 Pfam PF02481 DNA recombination-mediator protein A 80 284 9.8E-73 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JO41_09630 62891de58325527e10e161d004cdacd0 317 SUPERFAMILY SSF102405 86 289 1.31E-38 T 14-10-2018 JO41_09630 62891de58325527e10e161d004cdacd0 317 Gene3D G3DSA:3.40.50.450 2 295 2.1E-87 T 14-10-2018 JO41_00520 2fc7063b40483bda9ed83189c5e9b3b2 216 Pfam PF03006 Haemolysin-III related 11 209 7.5E-35 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 JO41_00520 2fc7063b40483bda9ed83189c5e9b3b2 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 215 1.6E-64 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 7 460 30.382 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 SMART SM00382 159 292 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Pfam PF00308 Bacterial dnaA protein 127 343 6.5E-86 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 370 438 1.4E-29 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 SUPERFAMILY SSF52540 128 337 1.9E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Gene3D G3DSA:1.10.1750.10 362 463 1.3E-32 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 419 438 1.5E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 223 237 1.5E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 257 284 1.5E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.5E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 191 205 1.5E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 SMART SM00760 369 438 9.7E-40 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 459 4.4E-156 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 ProSitePatterns PS01008 DnaA protein signature. 419 438 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Gene3D G3DSA:1.10.8.60 292 361 4.3E-20 T 14-10-2018 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 SUPERFAMILY SSF48295 357 461 1.73E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Gene3D G3DSA:3.30.300.180 8 114 3.4E-16 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Gene3D G3DSA:3.40.50.300 126 291 1.0E-49 T 14-10-2018 JO41_04675 5f755c7bf8a167724f55bad0e6511cf3 464 Pfam PF11638 DnaA N-terminal domain 9 66 1.5E-12 T 14-10-2018 IPR024633 DnaA N-terminal domain JO41_02855 0a8f9dd4fae0fde265d34f5beaa5f937 217 SUPERFAMILY SSF51569 3 206 1.34E-60 T 14-10-2018 JO41_02855 0a8f9dd4fae0fde265d34f5beaa5f937 217 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 205 2.3E-55 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JO41_02855 0a8f9dd4fae0fde265d34f5beaa5f937 217 Pfam PF01081 KDPG and KHG aldolase 9 198 5.0E-43 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JO41_02855 0a8f9dd4fae0fde265d34f5beaa5f937 217 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 127 140 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JO41_02855 0a8f9dd4fae0fde265d34f5beaa5f937 217 Gene3D G3DSA:3.20.20.70 1 214 9.0E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 Gene3D G3DSA:1.10.10.10 1 141 3.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 TIGRFAM TIGR04472 reg_rSAM_mob: mobile rSAM pair MarR family regulator 4 144 1.0E-88 T 14-10-2018 IPR031011 MarR family transcriptional regulator JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 Pfam PF01047 MarR family 35 89 3.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 SMART SM00347 22 125 2.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JO41_07895 7b8bbbe78e933506b332eb93adf00656 145 SUPERFAMILY SSF46785 6 142 1.94E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 Gene3D G3DSA:3.40.50.300 1 274 1.2E-56 T 14-10-2018 JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 Gene3D G3DSA:3.40.50.300 313 527 5.3E-48 T 14-10-2018 JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 SMART SM00382 35 225 7.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 SMART SM00382 353 529 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 Pfam PF00005 ABC transporter 345 483 2.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 Pfam PF00005 ABC transporter 29 176 1.1E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 SUPERFAMILY SSF52540 344 524 2.54E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10340 8bef3b1ec1ff9dc15648c75aa820f6ae 530 SUPERFAMILY SSF52540 2 236 1.77E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01895 dd6ff954ce4f49c1e7f8df8a17c4d972 195 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 6 190 2.6E-37 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_01895 dd6ff954ce4f49c1e7f8df8a17c4d972 195 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 7 190 3.7E-43 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 Gene3D G3DSA:1.25.40.10 19 315 3.5E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 Gene3D G3DSA:1.25.40.10 322 407 3.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 192 225 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 260 293 0.78 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 56 89 0.0024 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 319 352 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 90 123 450.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 158 191 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 22 55 0.59 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SMART SM00028 124 157 58.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SUPERFAMILY SSF48452 26 312 2.28E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 Pfam PF14559 Tetratricopeptide repeat 68 126 9.6E-9 T 14-10-2018 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 SUPERFAMILY SSF48452 317 386 1.23E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09975 7d6b4dccc346ede1021f426527ba9aa8 664 Pfam PF13432 Tetratricopeptide repeat 135 185 3.1E-4 T 14-10-2018 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 SUPERFAMILY SSF57938 151 228 3.14E-18 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 PRINTS PR00625 DnaJ domain signature 42 62 1.3E-30 T 14-10-2018 IPR001623 DnaJ domain JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-30 T 14-10-2018 IPR001623 DnaJ domain JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-30 T 14-10-2018 IPR001623 DnaJ domain JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 PRINTS PR00625 DnaJ domain signature 62 81 1.3E-30 T 14-10-2018 IPR001623 DnaJ domain JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 SMART SM00271 4 62 1.5E-32 T 14-10-2018 IPR001623 DnaJ domain JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 366 3.5E-122 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 SUPERFAMILY SSF49493 276 361 5.89E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 SUPERFAMILY SSF46565 3 113 1.22E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 382 37.568 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 SUPERFAMILY SSF49493 136 273 4.19E-16 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Gene3D G3DSA:2.10.230.10 164 224 1.2E-32 T 14-10-2018 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Gene3D G3DSA:2.60.260.20 134 266 1.2E-32 T 14-10-2018 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Pfam PF01556 DnaJ C terminal domain 138 350 3.0E-39 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Gene3D G3DSA:1.10.287.110 1 120 1.2E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Pfam PF00226 DnaJ domain 5 67 2.2E-28 T 14-10-2018 IPR001623 DnaJ domain JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Pfam PF00684 DnaJ central domain 164 224 9.4E-11 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 Gene3D G3DSA:2.60.260.20 271 376 2.1E-28 T 14-10-2018 JO41_07975 73b93b85933b6559c9c2efab09aef77f 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 Gene3D G3DSA:3.40.190.290 90 302 3.4E-36 T 14-10-2018 JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 SUPERFAMILY SSF53850 87 298 4.78E-35 T 14-10-2018 JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 Pfam PF03466 LysR substrate binding domain 87 294 5.0E-39 T 14-10-2018 IPR005119 LysR, substrate-binding JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 SUPERFAMILY SSF46785 1 84 1.12E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 Gene3D G3DSA:1.10.10.10 1 89 2.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_00700 09a8c5c1a703d361c3236cdca5e3c64b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.5E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JO41_04765 9d90eb72cfdaadf778126153a9c04507 145 SUPERFAMILY SSF55781 3 143 9.6E-42 T 14-10-2018 JO41_04765 9d90eb72cfdaadf778126153a9c04507 145 Pfam PF13185 GAF domain 36 142 7.5E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO41_04765 9d90eb72cfdaadf778126153a9c04507 145 Gene3D G3DSA:3.30.450.40 1 145 1.4E-57 T 14-10-2018 IPR029016 GAF-like domain superfamily JO41_04765 9d90eb72cfdaadf778126153a9c04507 145 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 84 101 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site JO41_03490 44ecbefdedf7073d2a129a83b17ab4c0 562 Gene3D G3DSA:3.40.50.1700 412 560 2.7E-5 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 JO41_03490 44ecbefdedf7073d2a129a83b17ab4c0 562 SUPERFAMILY SSF51445 44 396 1.26E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_03490 44ecbefdedf7073d2a129a83b17ab4c0 562 Gene3D G3DSA:3.20.20.300 55 387 5.7E-92 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JO41_03490 44ecbefdedf7073d2a129a83b17ab4c0 562 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 62 383 6.9E-75 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 262 270 - T 14-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 PIRSF PIRSF001348 1 606 1.9E-291 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 Gene3D G3DSA:3.40.449.10 13 237 3.5E-266 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 SUPERFAMILY SSF53795 238 605 1.3E-149 T 14-10-2018 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 13 234 5.9E-102 T 14-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 Gene3D G3DSA:2.170.8.10 49 398 3.5E-266 T 14-10-2018 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 Gene3D G3DSA:3.90.228.20 238 604 3.5E-266 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 2 606 49.803 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 238 605 4.7E-171 T 14-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JO41_01590 7fbbd2c668972b19a3c69073b00c4004 606 SUPERFAMILY SSF68923 4 237 1.57E-97 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JO41_11735 1bc39f90eb2db6ed6050472f91ca550e 238 SUPERFAMILY SSF54980 173 236 4.46E-6 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_11735 1bc39f90eb2db6ed6050472f91ca550e 238 Gene3D G3DSA:3.30.230.30 37 168 2.9E-44 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily JO41_11735 1bc39f90eb2db6ed6050472f91ca550e 238 SUPERFAMILY SSF54211 47 166 2.12E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_11735 1bc39f90eb2db6ed6050472f91ca550e 238 Pfam PF01205 Uncharacterized protein family UPF0029 55 160 4.1E-27 T 14-10-2018 IPR001498 Impact, N-terminal JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 SMART SM00283 407 654 6.0E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 Gene3D G3DSA:1.10.287.950 378 696 3.8E-49 T 14-10-2018 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 SMART SM00304 310 364 8.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 Pfam PF00672 HAMP domain 312 356 3.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 Pfam PF02743 Cache domain 90 272 1.9E-28 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 3.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 582 611 3.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 505 532 3.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 534 563 3.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 SUPERFAMILY SSF58104 420 651 2.62E-45 T 14-10-2018 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 621 1.6E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 SUPERFAMILY SSF58104 332 433 2.22E-8 T 14-10-2018 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 SUPERFAMILY SSF103190 96 185 1.41E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 Gene3D G3DSA:1.20.1480.50 275 367 1.8E-10 T 14-10-2018 JO41_06200 b9bf7b0fc239eb946a12eeda2e83d3c2 697 Gene3D G3DSA:3.30.450.20 143 274 3.2E-18 T 14-10-2018 JO41_02655 edf539fdba7d359c359a754131cfebd4 132 Pfam PF03840 Preprotein translocase SecG subunit 8 73 1.3E-16 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO41_02655 edf539fdba7d359c359a754131cfebd4 132 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 75 5.2E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO41_02655 edf539fdba7d359c359a754131cfebd4 132 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 2.6E-11 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO41_02655 edf539fdba7d359c359a754131cfebd4 132 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 2.6E-11 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JO41_11845 be786814a3f16919d9595c7638a0c2df 114 Pfam PF01740 STAS domain 4 106 2.6E-20 T 14-10-2018 IPR002645 STAS domain JO41_11845 be786814a3f16919d9595c7638a0c2df 114 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 9.2E-29 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 JO41_11845 be786814a3f16919d9595c7638a0c2df 114 SUPERFAMILY SSF52091 1 108 1.0E-27 T 14-10-2018 IPR036513 STAS domain superfamily JO41_11845 be786814a3f16919d9595c7638a0c2df 114 Gene3D G3DSA:3.30.750.24 6 112 2.4E-27 T 14-10-2018 IPR036513 STAS domain superfamily JO41_00200 916e79b4416598bba9a4197787eccc72 77 SUPERFAMILY SSF54814 5 60 1.5E-5 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO41_00200 916e79b4416598bba9a4197787eccc72 77 Hamap MF_00088 UPF0109 protein . 2 76 20.982 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 JO41_00200 916e79b4416598bba9a4197787eccc72 77 Pfam PF13083 KH domain 3 75 7.9E-21 T 14-10-2018 JO41_07620 a33bea929ef3be63b32134fc989b2702 513 Pfam PF00919 Uncharacterized protein family UPF0004 75 132 2.4E-10 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JO41_07620 a33bea929ef3be63b32134fc989b2702 513 SUPERFAMILY SSF102114 220 448 2.75E-47 T 14-10-2018 JO41_07620 a33bea929ef3be63b32134fc989b2702 513 SMART SM00729 219 430 5.8E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO41_07620 a33bea929ef3be63b32134fc989b2702 513 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 223 243 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JO41_07620 a33bea929ef3be63b32134fc989b2702 513 Pfam PF04055 Radical SAM superfamily 225 389 6.7E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_07620 a33bea929ef3be63b32134fc989b2702 513 Gene3D G3DSA:3.80.30.20 218 445 2.3E-69 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO41_07620 a33bea929ef3be63b32134fc989b2702 513 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 75 477 2.5E-120 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 JO41_06080 edfc1bbaf4a365515c92be25830155b0 475 SUPERFAMILY SSF53335 141 317 6.66E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_06080 edfc1bbaf4a365515c92be25830155b0 475 Pfam PF09243 Mitochondrial small ribosomal subunit Rsm22 170 360 7.0E-8 T 14-10-2018 IPR015324 Ribosomal protein Rsm22-like GO:0006412|GO:0008168 JO41_04100 0629966b17f89755648be01807cda3d2 322 SUPERFAMILY SSF64182 17 298 2.22E-46 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO41_04100 0629966b17f89755648be01807cda3d2 322 Gene3D G3DSA:3.90.1640.10 17 198 3.3E-27 T 14-10-2018 JO41_04100 0629966b17f89755648be01807cda3d2 322 Pfam PF01368 DHH family 18 159 1.6E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_04100 0629966b17f89755648be01807cda3d2 322 Pfam PF02272 DHHA1 domain 188 302 2.6E-13 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JO41_00730 e758300079444eee25c8b0a350c76166 537 Pfam PF08011 PD-(D/E)XK nuclease superfamily 439 532 6.8E-24 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO41_00730 e758300079444eee25c8b0a350c76166 537 Gene3D G3DSA:3.40.50.300 20 223 3.9E-5 T 14-10-2018 JO41_00730 e758300079444eee25c8b0a350c76166 537 SUPERFAMILY SSF52540 29 225 6.9E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00730 e758300079444eee25c8b0a350c76166 537 Pfam PF09820 Predicted AAA-ATPase 8 292 2.6E-103 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO41_03070 069641f1bd0d51a8af9ff4706543f8d3 516 Pfam PF10531 SLBB domain 417 448 2.7E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO41_03070 069641f1bd0d51a8af9ff4706543f8d3 516 Pfam PF10531 SLBB domain 203 248 1.7E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO41_03070 069641f1bd0d51a8af9ff4706543f8d3 516 Gene3D G3DSA:3.10.560.10 115 199 4.2E-10 T 14-10-2018 JO41_03070 069641f1bd0d51a8af9ff4706543f8d3 516 Gene3D G3DSA:3.10.560.10 200 286 6.2E-9 T 14-10-2018 JO41_03070 069641f1bd0d51a8af9ff4706543f8d3 516 Gene3D G3DSA:3.10.560.10 412 493 2.7E-7 T 14-10-2018 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 32.736 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 SMART SM00382 100 246 1.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 Gene3D G3DSA:1.20.120.140 5 305 9.6E-123 T 14-10-2018 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 Gene3D G3DSA:3.40.50.300 90 284 9.6E-123 T 14-10-2018 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 Pfam PF02978 Signal peptide binding domain 326 423 1.0E-30 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 Pfam PF00448 SRP54-type protein, GTPase domain 102 295 1.7E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 Gene3D G3DSA:1.10.260.30 308 439 1.5E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 SUPERFAMILY SSF52540 42 353 2.76E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 SMART SM00963 1 86 1.3E-30 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 SMART SM00962 101 295 4.1E-112 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 SUPERFAMILY SSF47446 326 426 4.58E-32 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 425 7.0E-178 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 JO41_03405 01c6fcd214df7afc31c9dec912a22472 441 Pfam PF02881 SRP54-type protein, helical bundle domain 6 81 2.2E-18 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 Pfam PF00005 ABC transporter 15 161 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 SUPERFAMILY SSF52540 233 480 5.23E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 SMART SM00382 23 215 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 Pfam PF00005 ABC transporter 266 422 1.2E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 SUPERFAMILY SSF52540 2 218 2.55E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 Gene3D G3DSA:3.40.50.300 1 230 5.3E-53 T 14-10-2018 JO41_02950 db96addd921af8bd8e1b399d07bcc957 501 Gene3D G3DSA:3.40.50.300 245 488 1.2E-39 T 14-10-2018 JO41_02215 b30c7ff44c6e0e2c2eef680e7d99ac3b 647 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 266 392 7.9E-8 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 JO41_04040 4823221094ddfb21f01a552359770476 224 Gene3D G3DSA:3.40.1010.10 1 110 1.1E-40 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JO41_04040 4823221094ddfb21f01a552359770476 224 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 JO41_04040 4823221094ddfb21f01a552359770476 224 Gene3D G3DSA:3.30.950.10 111 224 2.9E-29 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JO41_04040 4823221094ddfb21f01a552359770476 224 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 4 221 3.9E-61 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JO41_04040 4823221094ddfb21f01a552359770476 224 PIRSF PIRSF005917 1 224 1.0E-86 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JO41_04040 4823221094ddfb21f01a552359770476 224 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 222 34.721 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JO41_04040 4823221094ddfb21f01a552359770476 224 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 201 1.8E-29 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JO41_04040 4823221094ddfb21f01a552359770476 224 SUPERFAMILY SSF53790 3 220 3.14E-68 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JO41_03845 ce46a5d0432396acd6b2f76892606525 322 SUPERFAMILY SSF52151 3 298 1.39E-56 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JO41_03845 ce46a5d0432396acd6b2f76892606525 322 PIRSF PIRSF000446 1 320 1.1E-67 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 JO41_03845 ce46a5d0432396acd6b2f76892606525 322 Gene3D G3DSA:3.30.70.250 123 206 4.9E-77 T 14-10-2018 JO41_03845 ce46a5d0432396acd6b2f76892606525 322 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 312 2.2E-30 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JO41_03845 ce46a5d0432396acd6b2f76892606525 322 Gene3D G3DSA:3.40.366.10 5 294 4.9E-77 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JO41_03845 ce46a5d0432396acd6b2f76892606525 322 SUPERFAMILY SSF55048 137 205 2.88E-13 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JO41_03845 ce46a5d0432396acd6b2f76892606525 322 Pfam PF00698 Acyl transferase domain 4 288 1.3E-28 T 14-10-2018 IPR014043 Acyl transferase JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 Gene3D G3DSA:2.40.50.140 422 503 1.3E-7 T 14-10-2018 JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 Gene3D G3DSA:3.40.50.12160 4 136 4.6E-29 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 SMART SM00729 161 407 2.4E-33 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 Pfam PF00919 Uncharacterized protein family UPF0004 4 100 1.8E-22 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 Pfam PF04055 Radical SAM superfamily 165 365 1.4E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 SUPERFAMILY SSF102114 158 411 2.35E-44 T 14-10-2018 JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 498 8.9E-96 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 Gene3D G3DSA:3.80.30.20 160 421 4.5E-71 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 502 49.36 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 JO41_00475 57c647e794063a4aff705b9a7a4be50d 503 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 165 185 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 SMART SM00357 175 241 1.6E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 SUPERFAMILY SSF68912 124 170 1.06E-5 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily JO41_00530 d4bd1f907529be761913c56b6b81689b 542 SUPERFAMILY SSF50249 172 246 1.03E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_00530 d4bd1f907529be761913c56b6b81689b 542 Gene3D G3DSA:1.10.720.10 121 169 2.5E-10 T 14-10-2018 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 Hamap MF_01884 Transcription termination factor Rho [rho]. 124 539 222.654 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 279 483 3.1E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 Gene3D G3DSA:3.40.50.300 253 537 5.4E-127 T 14-10-2018 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 TIGRFAM TIGR00767 rho: transcription termination factor Rho 124 537 5.7E-218 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 Pfam PF07498 Rho termination factor, N-terminal domain 126 170 9.4E-14 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 SMART SM00959 126 170 1.8E-10 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 SMART SM00382 290 475 3.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_00530 d4bd1f907529be761913c56b6b81689b 542 SUPERFAMILY SSF52540 213 491 2.57E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00530 d4bd1f907529be761913c56b6b81689b 542 Pfam PF07497 Rho termination factor, RNA-binding domain 175 247 1.8E-29 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 JO41_00530 d4bd1f907529be761913c56b6b81689b 542 Gene3D G3DSA:2.40.50.140 170 246 7.4E-33 T 14-10-2018 JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 Gene3D G3DSA:1.10.8.60 167 237 2.2E-16 T 14-10-2018 JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 Gene3D G3DSA:1.20.272.10 247 351 1.3E-44 T 14-10-2018 JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 Pfam PF16193 AAA C-terminal domain 191 273 1.4E-26 T 14-10-2018 IPR032423 AAA C-terminal domain JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 SUPERFAMILY SSF48019 258 431 4.7E-65 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 Gene3D G3DSA:1.10.3710.10 354 447 1.3E-24 T 14-10-2018 JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 SMART SM00382 50 171 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 SUPERFAMILY SSF52540 14 239 1.27E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 Pfam PF12002 MgsA AAA+ ATPase C terminal 274 433 1.9E-60 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 160 5.0E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_03975 7a154077ab7b52adfd9394d14c1a6cf7 744 Gene3D G3DSA:3.40.50.300 5 166 2.2E-44 T 14-10-2018 JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 SMART SM00382 29 212 5.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 SUPERFAMILY SSF50331 237 364 3.16E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 Pfam PF00005 ABC transporter 21 162 1.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 Pfam PF08402 TOBE domain 284 336 2.8E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 Gene3D G3DSA:3.40.50.300 1 239 3.3E-73 T 14-10-2018 JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 SUPERFAMILY SSF52540 4 244 6.36E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 Gene3D G3DSA:2.40.50.100 240 362 5.6E-25 T 14-10-2018 JO41_10975 d424cc32d3fe7b1d841f70e1f12402c3 371 Gene3D G3DSA:2.40.50.140 286 349 5.6E-25 T 14-10-2018 JO41_09235 cd553dd9a2922d0ec3bed19a2b4c7a3c 570 SUPERFAMILY SSF55486 39 567 6.23E-115 T 14-10-2018 JO41_09235 cd553dd9a2922d0ec3bed19a2b4c7a3c 570 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 19 565 3.6E-213 T 14-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related JO41_09235 cd553dd9a2922d0ec3bed19a2b4c7a3c 570 Pfam PF01432 Peptidase family M3 319 552 4.1E-22 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JO41_09235 cd553dd9a2922d0ec3bed19a2b4c7a3c 570 Pfam PF01432 Peptidase family M3 172 274 1.0E-5 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JO41_09235 cd553dd9a2922d0ec3bed19a2b4c7a3c 570 Gene3D G3DSA:1.10.1370.30 5 570 1.3E-206 T 14-10-2018 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 1.1E-19 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 129 23.756 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 128 2.0E-24 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 SUPERFAMILY SSF54736 55 128 2.79E-20 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 1.3E-47 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 128 8.4E-24 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 SUPERFAMILY SSF48300 5 62 1.23E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 Gene3D G3DSA:1.20.5.710 4 55 7.4E-21 T 14-10-2018 JO41_01795 f37d7b8b7a9a184c41a9331afdc2515f 129 Gene3D G3DSA:3.30.1390.10 56 129 3.1E-27 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JO41_02275 83824ac7474289a0d08e5dc3307a9ddb 390 Pfam PF11843 Protein of unknown function (DUF3363) 258 353 9.5E-8 T 14-10-2018 IPR021795 Protein of unknown function DUF3363 JO41_04380 d9091e5b68817759b332ca60da0b9dd8 150 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 145 2.7E-51 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04380 d9091e5b68817759b332ca60da0b9dd8 150 SUPERFAMILY SSF52080 6 146 8.63E-40 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily JO41_04380 d9091e5b68817759b332ca60da0b9dd8 150 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04380 d9091e5b68817759b332ca60da0b9dd8 150 Gene3D G3DSA:3.100.10.10 71 147 2.5E-20 T 14-10-2018 JO41_04380 d9091e5b68817759b332ca60da0b9dd8 150 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 4 148 18.975 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 JO41_04380 d9091e5b68817759b332ca60da0b9dd8 150 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 146 1.0E-34 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P JO41_02750 cc2733aceb93ad965b5e6ce05b1b5c9b 73 Pfam PF02599 Global regulator protein family 1 52 7.4E-25 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO41_02750 cc2733aceb93ad965b5e6ce05b1b5c9b 73 Gene3D G3DSA:3.30.70.1680 1 62 4.9E-27 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 JO41_02750 cc2733aceb93ad965b5e6ce05b1b5c9b 73 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 6.0E-18 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO41_02750 cc2733aceb93ad965b5e6ce05b1b5c9b 73 SUPERFAMILY SSF117130 1 55 3.27E-19 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 JO41_02750 cc2733aceb93ad965b5e6ce05b1b5c9b 73 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 70 18.225 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO41_02750 cc2733aceb93ad965b5e6ce05b1b5c9b 73 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 61 3.4E-27 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JO41_03915 d32196f3386fd452a7aea83cb627dc61 458 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 89 413 8.1E-54 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO41_03915 d32196f3386fd452a7aea83cb627dc61 458 SUPERFAMILY SSF51445 74 439 4.21E-63 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_03915 d32196f3386fd452a7aea83cb627dc61 458 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 333 350 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 JO41_03915 d32196f3386fd452a7aea83cb627dc61 458 Gene3D G3DSA:3.20.20.300 71 431 1.9E-80 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JO41_00670 d3e080f4aad0afcb4be8415febceefc1 323 Gene3D G3DSA:1.25.40.920 51 322 5.6E-91 T 14-10-2018 IPR038537 TatT superfamily JO41_00670 d3e080f4aad0afcb4be8415febceefc1 323 Pfam PF16811 TRAP transporter T-component 59 320 3.0E-92 T 14-10-2018 IPR031823 TRAP transporter T-component JO41_04920 9d3e312542551a7e6f5b7cbd78320276 316 Pfam PF03193 RsgA GTPase 67 247 7.8E-41 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 JO41_04920 9d3e312542551a7e6f5b7cbd78320276 316 SUPERFAMILY SSF50249 1 69 1.6E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_04920 9d3e312542551a7e6f5b7cbd78320276 316 Gene3D G3DSA:1.10.40.50 247 315 3.5E-15 T 14-10-2018 JO41_04920 9d3e312542551a7e6f5b7cbd78320276 316 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 312 27.887 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JO41_04920 9d3e312542551a7e6f5b7cbd78320276 316 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 44 304 5.4E-51 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JO41_04920 9d3e312542551a7e6f5b7cbd78320276 316 Gene3D G3DSA:3.40.50.300 69 246 4.9E-40 T 14-10-2018 JO41_04920 9d3e312542551a7e6f5b7cbd78320276 316 SUPERFAMILY SSF52540 83 308 2.75E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 SUPERFAMILY SSF82679 3 116 2.88E-22 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 SMART SM00738 2 117 1.5E-34 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 Gene3D G3DSA:3.30.70.940 1 124 1.4E-30 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 PRINTS PR00338 Transcription termination factor NUSG signature 58 70 9.6E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 PRINTS PR00338 Transcription termination factor NUSG signature 142 157 9.6E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 PRINTS PR00338 Transcription termination factor NUSG signature 160 176 9.6E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 183 1.1E-55 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 Pfam PF02357 Transcription termination factor nusG 3 112 1.7E-18 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 184 19.686 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 Gene3D G3DSA:2.30.30.30 125 184 4.1E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 SUPERFAMILY SSF50104 130 182 3.25E-15 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO41_01815 1bb14b93c07265b490709ca1b4b86d65 184 ProSitePatterns PS01014 Transcription termination factor nusG signature. 167 176 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JO41_04285 4222178fa0f108708328b083b5336b62 163 SUPERFAMILY SSF55826 2 161 4.06E-41 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO41_04285 4222178fa0f108708328b083b5336b62 163 Gene3D G3DSA:3.90.960.10 2 163 6.3E-47 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO41_04285 4222178fa0f108708328b083b5336b62 163 Pfam PF04073 Aminoacyl-tRNA editing domain 23 150 8.9E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JO41_09650 389072b316bd93305f34b4f921ab2a97 207 Gene3D G3DSA:3.40.50.150 2 189 1.0E-25 T 14-10-2018 JO41_09650 389072b316bd93305f34b4f921ab2a97 207 SUPERFAMILY SSF53335 5 183 1.81E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_09650 389072b316bd93305f34b4f921ab2a97 207 Pfam PF13489 Methyltransferase domain 25 157 1.4E-13 T 14-10-2018 JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 Gene3D G3DSA:3.40.50.300 342 594 2.7E-83 T 14-10-2018 JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 Pfam PF00005 ABC transporter 370 517 2.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 SMART SM00382 379 565 7.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 Gene3D G3DSA:1.20.1560.10 4 335 2.3E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 SUPERFAMILY SSF52540 345 589 3.44E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 Pfam PF00664 ABC transporter transmembrane region 19 308 1.8E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_04910 1b33807e5318e194a77f791ff8376ab1 594 SUPERFAMILY SSF90123 6 341 3.66E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_08375 3301a2d8164636fd95db59ec5e58d1d0 133 Gene3D G3DSA:2.40.50.140 1 117 9.9E-34 T 14-10-2018 JO41_08375 3301a2d8164636fd95db59ec5e58d1d0 133 Pfam PF00436 Single-strand binding protein family 4 105 1.7E-26 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JO41_08375 3301a2d8164636fd95db59ec5e58d1d0 133 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 110 8.5E-34 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO41_08375 3301a2d8164636fd95db59ec5e58d1d0 133 Hamap MF_00984 Single-stranded DNA-binding protein. 4 109 27.787 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO41_08375 3301a2d8164636fd95db59ec5e58d1d0 133 PIRSF PIRSF002070 1 127 8.0E-26 T 14-10-2018 JO41_08375 3301a2d8164636fd95db59ec5e58d1d0 133 SUPERFAMILY SSF50249 4 133 2.43E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_01850 1a58656af07cf0dca0de6c7daf679c42 346 Pfam PF02547 Queuosine biosynthesis protein 4 345 6.8E-122 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO41_01850 1a58656af07cf0dca0de6c7daf679c42 346 SUPERFAMILY SSF111337 5 346 1.96E-117 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO41_01850 1a58656af07cf0dca0de6c7daf679c42 346 Gene3D G3DSA:3.40.1780.10 14 345 4.7E-110 T 14-10-2018 JO41_01850 1a58656af07cf0dca0de6c7daf679c42 346 Gene3D G3DSA:2.40.10.240 64 166 4.7E-110 T 14-10-2018 JO41_01850 1a58656af07cf0dca0de6c7daf679c42 346 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 42.518 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO41_01850 1a58656af07cf0dca0de6c7daf679c42 346 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 346 3.9E-120 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.6E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 273.485 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Gene3D G3DSA:3.30.70.870 289 370 3.3E-34 T 14-10-2018 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Pfam PF06421 GTP-binding protein LepA C-terminus 491 597 7.0E-46 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 179 3.2E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Pfam PF00679 Elongation factor G C-terminus 404 488 1.7E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Pfam PF14492 Elongation Factor G, domain II 295 367 1.5E-6 T 14-10-2018 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 SUPERFAMILY SSF54980 404 497 7.67E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 SUPERFAMILY SSF50447 168 291 1.92E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Gene3D G3DSA:3.30.70.3380 371 482 7.3E-40 T 14-10-2018 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 3.2E-300 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 SUPERFAMILY SSF52540 4 208 1.03E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Gene3D G3DSA:3.40.50.300 4 188 7.6E-69 T 14-10-2018 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Gene3D G3DSA:3.30.70.2570 483 557 2.2E-29 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Gene3D G3DSA:2.40.30.10 189 287 2.3E-33 T 14-10-2018 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 Pfam PF03144 Elongation factor Tu domain 2 208 278 2.4E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO41_08470 2f9147dc8e6d63c8383180bbd35b5f88 601 SUPERFAMILY SSF54980 295 373 8.63E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_01760 391fab5770a2c35030014dfe9c928589 275 SUPERFAMILY SSF53850 40 269 3.44E-44 T 14-10-2018 JO41_01760 391fab5770a2c35030014dfe9c928589 275 Gene3D G3DSA:3.40.190.10 127 224 4.1E-44 T 14-10-2018 JO41_01760 391fab5770a2c35030014dfe9c928589 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 266 3.5E-44 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO41_01760 391fab5770a2c35030014dfe9c928589 275 Gene3D G3DSA:3.40.190.10 42 266 4.1E-44 T 14-10-2018 JO41_01760 391fab5770a2c35030014dfe9c928589 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site JO41_01760 391fab5770a2c35030014dfe9c928589 275 SMART SM00062 41 268 2.8E-35 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO41_01120 63da1d144e6592c21a4bc26ecb8d98bb 177 Gene3D G3DSA:1.10.10.10 82 174 3.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_01120 63da1d144e6592c21a4bc26ecb8d98bb 177 SUPERFAMILY SSF46785 83 156 8.52E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_01120 63da1d144e6592c21a4bc26ecb8d98bb 177 Pfam PF04079 Segregation and condensation complex subunit ScpB 7 164 2.5E-54 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JO41_01120 63da1d144e6592c21a4bc26ecb8d98bb 177 PIRSF PIRSF019345 1 175 9.7E-54 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JO41_01120 63da1d144e6592c21a4bc26ecb8d98bb 177 SUPERFAMILY SSF46785 5 76 4.54E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_01120 63da1d144e6592c21a4bc26ecb8d98bb 177 Gene3D G3DSA:1.10.10.10 1 81 1.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_01120 63da1d144e6592c21a4bc26ecb8d98bb 177 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 173 4.1E-42 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JO41_07055 778647e57e1b7fac3beb5fc8ded8d28c 223 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 57 210 5.5E-35 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 JO41_07055 778647e57e1b7fac3beb5fc8ded8d28c 223 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 57 210 1.6E-37 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 JO41_01885 cd7426d58e5aa31df621482d7fa7f656 322 Pfam PF03824 High-affinity nickel-transport protein 68 172 1.3E-13 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 JO41_11755 cbbef01fd0b843e1eff43331b81873c0 432 SUPERFAMILY SSF52540 20 278 3.43E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11755 cbbef01fd0b843e1eff43331b81873c0 432 Pfam PF13177 DNA polymerase III, delta subunit 10 261 1.8E-36 T 14-10-2018 JO41_10775 acda39452f5442d67528397cab68e957 593 SUPERFAMILY SSF90123 3 311 1.96E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10775 acda39452f5442d67528397cab68e957 593 Pfam PF00664 ABC transporter transmembrane region 11 275 2.1E-28 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_10775 acda39452f5442d67528397cab68e957 593 SMART SM00382 377 563 6.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10775 acda39452f5442d67528397cab68e957 593 Gene3D G3DSA:1.20.1560.10 1 313 5.2E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10775 acda39452f5442d67528397cab68e957 593 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10775 acda39452f5442d67528397cab68e957 593 Pfam PF00005 ABC transporter 369 517 2.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10775 acda39452f5442d67528397cab68e957 593 SUPERFAMILY SSF52540 361 586 8.2E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10775 acda39452f5442d67528397cab68e957 593 Gene3D G3DSA:3.40.50.300 362 587 1.6E-90 T 14-10-2018 JO41_02350 f98761e63c260f3f1cf7773441c95580 209 Gene3D G3DSA:3.40.50.300 4 206 9.3E-51 T 14-10-2018 JO41_02350 f98761e63c260f3f1cf7773441c95580 209 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 20.813 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JO41_02350 f98761e63c260f3f1cf7773441c95580 209 Pfam PF02223 Thymidylate kinase 9 199 1.0E-42 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 JO41_02350 f98761e63c260f3f1cf7773441c95580 209 SUPERFAMILY SSF52540 6 205 9.03E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02350 f98761e63c260f3f1cf7773441c95580 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 199 3.0E-43 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JO41_03540 28d69e23d5bab777b8f5c890d8e682e2 368 SUPERFAMILY SSF101852 39 129 1.05E-13 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal JO41_03540 28d69e23d5bab777b8f5c890d8e682e2 368 SUPERFAMILY SSF52799 163 367 1.92E-16 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like JO41_03540 28d69e23d5bab777b8f5c890d8e682e2 368 Gene3D G3DSA:3.90.190.10 160 368 5.0E-19 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like JO41_03540 28d69e23d5bab777b8f5c890d8e682e2 368 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 38 127 2.2E-7 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase JO41_03540 28d69e23d5bab777b8f5c890d8e682e2 368 Gene3D G3DSA:2.40.30.90 31 130 8.5E-19 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal JO41_03540 28d69e23d5bab777b8f5c890d8e682e2 368 Pfam PF13350 Tyrosine phosphatase family 200 367 1.8E-14 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type JO41_01505 a16064b546e455b6f7158c5e10f19760 436 Gene3D G3DSA:3.40.190.10 52 387 2.7E-74 T 14-10-2018 JO41_01505 a16064b546e455b6f7158c5e10f19760 436 Pfam PF01547 Bacterial extracellular solute-binding protein 51 347 2.2E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_01505 a16064b546e455b6f7158c5e10f19760 436 Gene3D G3DSA:3.40.190.10 151 421 2.7E-74 T 14-10-2018 JO41_01505 a16064b546e455b6f7158c5e10f19760 436 SUPERFAMILY SSF53850 20 427 9.51E-62 T 14-10-2018 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 PIRSF PIRSF000709 137 245 3.5E-4 T 14-10-2018 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 PIRSF PIRSF000709 2 110 1.9E-6 T 14-10-2018 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 122 2.2E-30 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 139 216 5.9E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 SMART SM00855 2 188 7.2E-25 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 Gene3D G3DSA:3.40.50.1240 1 247 2.2E-87 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 SUPERFAMILY SSF53254 1 244 5.05E-76 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 227 42.897 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 1 245 3.4E-121 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 JO41_11330 badb9d2a0cd291b3bde314d84feda41e 247 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 572 684 2.6E-9 T 14-10-2018 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 SMART SM01359 1072 1227 7.6E-29 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 Gene3D G3DSA:2.60.40.1930 697 802 2.8E-5 T 14-10-2018 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 Gene3D G3DSA:2.60.40.1220 365 453 5.4E-5 T 14-10-2018 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 SUPERFAMILY SSF48239 1510 1789 7.07E-14 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 Pfam PF01835 MG2 domain 697 791 3.3E-12 T 14-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1073 1227 1.5E-16 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 Gene3D G3DSA:1.50.10.20 1504 1791 2.1E-18 T 14-10-2018 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 Pfam PF00207 Alpha-2-macroglobulin family 1291 1378 4.0E-12 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 JO41_00725 9ab491b4c1d4eb4ceea211f7e9299f19 2028 SMART SM01360 1291 1380 1.1E-14 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 Hamap MF_00625 Selenide, water dikinase [selD]. 9 352 36.004 T 14-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 162 5.6E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 Gene3D G3DSA:3.90.650.10 171 347 6.8E-49 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 SUPERFAMILY SSF56042 169 348 2.09E-47 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 348 1.5E-25 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 Gene3D G3DSA:3.30.1330.10 5 168 2.1E-43 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 TIGRFAM TIGR00476 selD: selenide, water dikinase 17 320 1.8E-110 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 SUPERFAMILY SSF55326 16 168 2.84E-37 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO41_02900 2e5b998500390f8d4fda4d90dcd8fd38 352 PIRSF PIRSF036407 14 352 2.0E-106 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 SUPERFAMILY SSF53092 4 146 1.74E-15 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 Gene3D G3DSA:3.40.350.10 1 145 2.0E-45 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 Pfam PF00557 Metallopeptidase family M24 305 515 2.8E-41 T 14-10-2018 IPR000994 Peptidase M24 JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 Gene3D G3DSA:3.90.230.10 300 585 4.8E-94 T 14-10-2018 JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 SUPERFAMILY SSF55920 298 545 8.9E-53 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 Pfam PF16188 C-terminal region of peptidase_M24 526 585 1.9E-20 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 135 3.9E-18 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 Pfam PF16189 Creatinase/Prolidase N-terminal domain 147 301 6.6E-44 T 14-10-2018 JO41_10500 2e2bb04b624b9fa36d25c4f601310e1a 585 Gene3D G3DSA:3.40.350.10 146 299 4.0E-38 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.1E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.1E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.1E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.1E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.1E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.1E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.2E-112 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 Pfam PF00318 Ribosomal protein S2 9 224 3.9E-98 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 Gene3D G3DSA:1.10.287.610 103 150 2.0E-92 T 14-10-2018 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 Gene3D G3DSA:3.40.50.10490 9 219 2.0E-92 T 14-10-2018 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 230 43.067 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11195 f9eb0a38f438f90b421b889cd12197ec 294 SUPERFAMILY SSF52313 6 226 8.37E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily JO41_12550 ea69bcb73c4e180ebd4ccc16de0854bf 257 SUPERFAMILY SSF52540 11 226 3.4E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12550 ea69bcb73c4e180ebd4ccc16de0854bf 257 Gene3D G3DSA:3.40.50.300 11 241 7.2E-58 T 14-10-2018 JO41_12550 ea69bcb73c4e180ebd4ccc16de0854bf 257 SMART SM00382 37 214 4.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_12550 ea69bcb73c4e180ebd4ccc16de0854bf 257 Pfam PF00005 ABC transporter 28 167 6.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_12550 ea69bcb73c4e180ebd4ccc16de0854bf 257 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_03380 01c3f6e510b0de76c45e00363649400a 329 Gene3D G3DSA:3.40.50.300 139 322 1.2E-67 T 14-10-2018 JO41_03380 01c3f6e510b0de76c45e00363649400a 329 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 316 37.804 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 JO41_03380 01c3f6e510b0de76c45e00363649400a 329 Pfam PF07475 HPr Serine kinase C-terminal domain 140 308 1.5E-67 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 JO41_03380 01c3f6e510b0de76c45e00363649400a 329 SUPERFAMILY SSF53795 141 308 4.88E-36 T 14-10-2018 JO41_03380 01c3f6e510b0de76c45e00363649400a 329 Pfam PF02603 HPr Serine kinase N terminus 19 136 2.2E-37 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 JO41_03380 01c3f6e510b0de76c45e00363649400a 329 Gene3D G3DSA:3.40.1390.20 15 138 1.3E-36 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JO41_03380 01c3f6e510b0de76c45e00363649400a 329 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 13 310 7.3E-110 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 JO41_03380 01c3f6e510b0de76c45e00363649400a 329 SUPERFAMILY SSF75138 20 140 3.79E-32 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JO41_08910 247deb244e8812e37f0920eb68252313 229 Pfam PF13545 Crp-like helix-turn-helix domain 164 218 4.7E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JO41_08910 247deb244e8812e37f0920eb68252313 229 SUPERFAMILY SSF51206 3 135 1.96E-11 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_08910 247deb244e8812e37f0920eb68252313 229 SUPERFAMILY SSF46785 157 219 2.5E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_08910 247deb244e8812e37f0920eb68252313 229 Gene3D G3DSA:2.60.120.1460 3 223 4.6E-36 T 14-10-2018 JO41_08910 247deb244e8812e37f0920eb68252313 229 SMART SM00419 173 223 7.5E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 Gene3D G3DSA:3.40.50.150 150 444 3.7E-113 T 14-10-2018 JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 Gene3D G3DSA:1.20.1260.30 4 141 3.7E-34 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 SUPERFAMILY SSF53335 12 500 3.66E-138 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 Pfam PF02384 N-6 DNA Methylase 149 461 6.3E-113 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 305 329 3.1E-21 T 14-10-2018 JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 197 211 3.1E-21 T 14-10-2018 JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 3.1E-21 T 14-10-2018 JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 271 283 3.1E-21 T 14-10-2018 JO41_06185 5b2b6aa1fa97f9b7530ae2f58aa22abb 501 Pfam PF12161 HsdM N-terminal domain 12 138 2.3E-23 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JO41_00370 f28eb0775dcceb5e4d607d12caf214a0 300 Gene3D G3DSA:1.10.8.1080 218 295 9.6E-23 T 14-10-2018 JO41_00370 f28eb0775dcceb5e4d607d12caf214a0 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 294 39.735 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 JO41_00370 f28eb0775dcceb5e4d607d12caf214a0 300 SUPERFAMILY SSF53697 5 247 4.23E-72 T 14-10-2018 JO41_00370 f28eb0775dcceb5e4d607d12caf214a0 300 Pfam PF13580 SIS domain 39 163 1.3E-6 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JO41_00370 f28eb0775dcceb5e4d607d12caf214a0 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 3.4E-116 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 JO41_00370 f28eb0775dcceb5e4d607d12caf214a0 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 184 201 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 JO41_00370 f28eb0775dcceb5e4d607d12caf214a0 300 Gene3D G3DSA:3.40.50.10490 3 217 3.0E-79 T 14-10-2018 JO41_01680 76a931c135fb329911e48e25ec9ef8c3 299 Gene3D G3DSA:3.80.30.20 20 221 2.4E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO41_01680 76a931c135fb329911e48e25ec9ef8c3 299 Pfam PF04055 Radical SAM superfamily 27 188 1.4E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_01680 76a931c135fb329911e48e25ec9ef8c3 299 SMART SM00729 21 240 9.1E-22 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO41_01680 76a931c135fb329911e48e25ec9ef8c3 299 SUPERFAMILY SSF102114 6 244 4.97E-36 T 14-10-2018 JO41_02435 b905935491ccf5a9868b119bc7483106 447 SUPERFAMILY SSF100950 195 441 1.05E-58 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_02435 b905935491ccf5a9868b119bc7483106 447 Gene3D G3DSA:3.40.1080.20 297 446 1.7E-56 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily JO41_02435 b905935491ccf5a9868b119bc7483106 447 TIGRFAM TIGR03948 butyr_acet_CoA: butyryl-CoA:acetate CoA-transferase 2 446 1.5E-248 T 14-10-2018 IPR023990 Butyryl-CoA:acetate CoA-transferase JO41_02435 b905935491ccf5a9868b119bc7483106 447 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 279 435 1.1E-59 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain JO41_02435 b905935491ccf5a9868b119bc7483106 447 SUPERFAMILY SSF100950 5 227 3.67E-32 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_02435 b905935491ccf5a9868b119bc7483106 447 Gene3D G3DSA:3.40.1080.10 1 186 6.4E-52 T 14-10-2018 JO41_02435 b905935491ccf5a9868b119bc7483106 447 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 6 182 7.0E-22 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 JO41_02435 b905935491ccf5a9868b119bc7483106 447 Gene3D G3DSA:3.30.750.70 191 294 8.4E-33 T 14-10-2018 JO41_05880 7178acdbd2948feec90c5acc24bbbfce 479 Gene3D G3DSA:3.30.420.40 116 269 3.0E-10 T 14-10-2018 JO41_05880 7178acdbd2948feec90c5acc24bbbfce 479 SUPERFAMILY SSF53067 166 275 4.86E-7 T 14-10-2018 JO41_05880 7178acdbd2948feec90c5acc24bbbfce 479 SUPERFAMILY SSF53067 276 478 6.47E-23 T 14-10-2018 JO41_05880 7178acdbd2948feec90c5acc24bbbfce 479 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 369 440 3.6E-7 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JO41_05880 7178acdbd2948feec90c5acc24bbbfce 479 Gene3D G3DSA:3.30.420.40 364 479 9.8E-21 T 14-10-2018 JO41_05880 7178acdbd2948feec90c5acc24bbbfce 479 Gene3D G3DSA:3.30.420.40 270 363 4.0E-6 T 14-10-2018 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 SUPERFAMILY SSF110324 2 77 2.37E-29 T 14-10-2018 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 PRINTS PR00063 Ribosomal protein L27 signature 4 28 9.1E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 PRINTS PR00063 Ribosomal protein L27 signature 29 53 9.1E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 PRINTS PR00063 Ribosomal protein L27 signature 54 78 9.1E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 Gene3D G3DSA:2.40.50.100 21 83 7.0E-26 T 14-10-2018 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 75 7.2E-31 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 2.0E-12 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 Pfam PF01016 Ribosomal L27 protein 2 80 4.5E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08995 9951d731e6bb8c0431838450ec30cd69 83 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 25.555 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_06060 b04af89e1b461ecdbcb55577be036cc7 227 SUPERFAMILY SSF52540 13 193 3.56E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06060 b04af89e1b461ecdbcb55577be036cc7 227 Gene3D G3DSA:3.40.50.300 7 226 4.5E-15 T 14-10-2018 JO41_11975 dbd682ae1bc22df95f537570667ede8a 559 Pfam PF05036 Sporulation related domain 484 553 6.4E-6 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JO41_11975 dbd682ae1bc22df95f537570667ede8a 559 SUPERFAMILY SSF110997 484 556 4.45E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO41_03080 f8e5625e42547880ae5b24e8a37e4ff7 329 SUPERFAMILY SSF51735 1 315 3.1E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_03080 f8e5625e42547880ae5b24e8a37e4ff7 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 9.9E-28 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JO41_03080 f8e5625e42547880ae5b24e8a37e4ff7 329 Gene3D G3DSA:3.40.50.720 1 317 4.7E-50 T 14-10-2018 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 1.4E-38 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 1.6E-28 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 Gene3D G3DSA:1.10.8.410 237 286 1.8E-27 T 14-10-2018 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 PRINTS PR00207 Flagellin signature 109 132 1.2E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 PRINTS PR00207 Flagellin signature 35 52 1.2E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 PRINTS PR00207 Flagellin signature 74 93 1.2E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 Gene3D G3DSA:1.20.1330.10 48 236 2.0E-54 T 14-10-2018 JO41_07000 9ad709c5dfa92d08e8cde6c1d828c575 286 SUPERFAMILY SSF64518 1 286 1.57E-85 T 14-10-2018 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 SMART SM00382 73 244 4.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 SUPERFAMILY SSF52540 18 284 1.03E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 Pfam PF00154 recA bacterial DNA recombination protein 22 285 1.2E-136 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 Gene3D G3DSA:3.40.50.300 43 284 5.4E-79 T 14-10-2018 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 PRINTS PR00142 RecA protein signature 109 138 1.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 PRINTS PR00142 RecA protein signature 226 254 1.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 PRINTS PR00142 RecA protein signature 181 210 1.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 PRINTS PR00142 RecA protein signature 143 172 1.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 PRINTS PR00142 RecA protein signature 260 289 1.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 PRINTS PR00142 RecA protein signature 314 331 1.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 SUPERFAMILY SSF54752 286 341 3.01E-18 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 ProSitePatterns PS00321 recA signature. 229 237 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 Hamap MF_00268 Protein RecA [recA]. 20 346 49.821 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 Gene3D G3DSA:3.30.250.10 287 344 3.5E-22 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JO41_11540 1d2926a67af851e90325ca1d87a71df3 445 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 19 340 1.7E-161 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JO41_07550 48d48379abaad2757ec021a3b9910858 434 Pfam PF13365 Trypsin-like peptidase domain 140 279 4.2E-34 T 14-10-2018 JO41_07550 48d48379abaad2757ec021a3b9910858 434 SUPERFAMILY SSF50156 277 420 1.63E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO41_07550 48d48379abaad2757ec021a3b9910858 434 Gene3D G3DSA:2.40.10.120 93 314 1.3E-74 T 14-10-2018 JO41_07550 48d48379abaad2757ec021a3b9910858 434 SUPERFAMILY SSF50494 107 315 1.69E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO41_07550 48d48379abaad2757ec021a3b9910858 434 Gene3D G3DSA:2.30.42.10 315 434 2.1E-22 T 14-10-2018 JO41_07550 48d48379abaad2757ec021a3b9910858 434 PRINTS PR00834 HtrA/DegQ protease family signature 377 389 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_07550 48d48379abaad2757ec021a3b9910858 434 PRINTS PR00834 HtrA/DegQ protease family signature 170 190 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_07550 48d48379abaad2757ec021a3b9910858 434 PRINTS PR00834 HtrA/DegQ protease family signature 213 237 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_07550 48d48379abaad2757ec021a3b9910858 434 PRINTS PR00834 HtrA/DegQ protease family signature 149 161 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_07550 48d48379abaad2757ec021a3b9910858 434 PRINTS PR00834 HtrA/DegQ protease family signature 250 267 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_07550 48d48379abaad2757ec021a3b9910858 434 PRINTS PR00834 HtrA/DegQ protease family signature 272 289 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_07550 48d48379abaad2757ec021a3b9910858 434 Pfam PF13180 PDZ domain 340 428 8.6E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_07550 48d48379abaad2757ec021a3b9910858 434 SMART SM00228 333 419 7.7E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_03455 2e575767655763527f2dca0344a804e1 128 Pfam PF00825 Ribonuclease P 6 109 4.6E-13 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JO41_03455 2e575767655763527f2dca0344a804e1 128 Gene3D G3DSA:3.30.230.10 2 118 4.3E-17 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_03455 2e575767655763527f2dca0344a804e1 128 SUPERFAMILY SSF54211 6 111 7.08E-16 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_03455 2e575767655763527f2dca0344a804e1 128 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 19 92 4.0E-4 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JO41_11815 5ee60d682d127734a1907052872fbe43 298 Pfam PF02401 LytB protein 12 293 3.2E-78 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JO41_11815 5ee60d682d127734a1907052872fbe43 298 Gene3D G3DSA:3.40.1010.20 111 208 3.1E-81 T 14-10-2018 JO41_11815 5ee60d682d127734a1907052872fbe43 298 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 12 294 1.3E-81 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JO41_11815 5ee60d682d127734a1907052872fbe43 298 Gene3D G3DSA:3.40.50.11270 21 110 3.1E-81 T 14-10-2018 JO41_11815 5ee60d682d127734a1907052872fbe43 298 Gene3D G3DSA:3.40.1010.20 13 293 3.1E-81 T 14-10-2018 JO41_11815 5ee60d682d127734a1907052872fbe43 298 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 10 297 30.185 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JO41_11385 73dcd9c6bf4e8980f654f4250132e3b4 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 8.6E-54 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_11385 73dcd9c6bf4e8980f654f4250132e3b4 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_11385 73dcd9c6bf4e8980f654f4250132e3b4 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 59.965 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_11385 73dcd9c6bf4e8980f654f4250132e3b4 249 SUPERFAMILY SSF51351 1 245 1.7E-89 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_11385 73dcd9c6bf4e8980f654f4250132e3b4 249 Pfam PF00121 Triosephosphate isomerase 5 245 2.6E-92 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_11385 73dcd9c6bf4e8980f654f4250132e3b4 249 Gene3D G3DSA:3.20.20.70 1 248 6.1E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 Pfam PF02872 5'-nucleotidase, C-terminal domain 347 494 2.5E-37 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 Pfam PF00149 Calcineurin-like phosphoesterase 52 273 4.8E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 Gene3D G3DSA:3.60.21.10 45 345 3.2E-71 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 SUPERFAMILY SSF56300 46 345 6.2E-71 T 14-10-2018 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 SUPERFAMILY SSF55816 344 532 6.8E-49 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 PRINTS PR01607 Apyrase family signature 471 490 4.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 PRINTS PR01607 Apyrase family signature 48 66 4.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 PRINTS PR01607 Apyrase family signature 281 301 4.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 PRINTS PR01607 Apyrase family signature 255 278 4.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 PRINTS PR01607 Apyrase family signature 229 246 4.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 PRINTS PR01607 Apyrase family signature 400 423 4.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_09790 8c7479f4b475242a269cebffb0d8567e 536 Gene3D G3DSA:3.90.780.10 352 535 7.8E-49 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_00115 486f69fee3388c628696c925f60eb08b 925 Gene3D G3DSA:2.60.40.10 511 602 1.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_00115 486f69fee3388c628696c925f60eb08b 925 Gene3D G3DSA:2.60.40.10 288 406 4.8E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_00115 486f69fee3388c628696c925f60eb08b 925 Gene3D G3DSA:2.60.40.10 408 507 3.0E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_00115 486f69fee3388c628696c925f60eb08b 925 Pfam PF04773 FecR protein 86 178 2.7E-7 T 14-10-2018 IPR006860 FecR protein JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 265 353 3.6E-28 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 182 1.0E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 80 1.0E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 111 1.0E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 166 1.0E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 154 1.0E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 94 111 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 SUPERFAMILY SSF54534 202 356 5.11E-40 T 14-10-2018 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 190 4.9E-47 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 SUPERFAMILY SSF50891 51 192 1.46E-57 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 Gene3D G3DSA:2.40.100.10 49 197 1.9E-61 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JO41_03435 5d3237dd60d89472b50d6da47ee2a458 356 Gene3D G3DSA:3.10.50.40 217 356 1.2E-41 T 14-10-2018 JO41_01190 1c6ff64c0518c81f7a38467ca1f091dd 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 84 1.2E-12 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JO41_01190 1c6ff64c0518c81f7a38467ca1f091dd 299 Pfam PF00589 Phage integrase family 110 284 4.7E-42 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO41_01190 1c6ff64c0518c81f7a38467ca1f091dd 299 Gene3D G3DSA:1.10.443.10 108 292 6.8E-58 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO41_01190 1c6ff64c0518c81f7a38467ca1f091dd 299 SUPERFAMILY SSF56349 17 287 2.47E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO41_01190 1c6ff64c0518c81f7a38467ca1f091dd 299 Gene3D G3DSA:1.10.150.130 2 97 4.2E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 3.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 3.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 SUPERFAMILY SSF47413 2 47 2.81E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 47 1.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Pfam PF00294 pfkB family carbohydrate kinase 331 617 3.1E-59 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Pfam PF13377 Periplasmic binding protein-like domain 178 303 7.7E-11 T 14-10-2018 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Gene3D G3DSA:1.10.260.40 1 53 7.9E-16 T 14-10-2018 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Gene3D G3DSA:3.40.50.2300 74 305 7.0E-26 T 14-10-2018 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 SUPERFAMILY SSF53822 74 306 3.77E-22 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Gene3D G3DSA:3.40.50.2300 169 282 7.0E-26 T 14-10-2018 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Gene3D G3DSA:3.40.1190.20 330 627 6.8E-84 T 14-10-2018 IPR029056 Ribokinase-like JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 SUPERFAMILY SSF53613 331 626 3.12E-70 T 14-10-2018 IPR029056 Ribokinase-like JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 PRINTS PR00990 Ribokinase signature 362 381 7.8E-22 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 PRINTS PR00990 Ribokinase signature 335 356 7.8E-22 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 PRINTS PR00990 Ribokinase signature 502 517 7.8E-22 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 PRINTS PR00990 Ribokinase signature 542 553 7.8E-22 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 PRINTS PR00990 Ribokinase signature 434 447 7.8E-22 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 Hamap MF_01987 Ribokinase [rbsK]. 331 627 21.413 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 JO41_03240 b7a6c5f9f1f6607ec1e8c1277e619157 629 SMART SM00354 1 71 1.3E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 PRINTS PR01467 Bacterial arginine repressor signature 38 53 2.3E-14 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.3E-14 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 PRINTS PR01467 Bacterial arginine repressor signature 120 135 2.3E-14 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 PRINTS PR01467 Bacterial arginine repressor signature 22 35 2.3E-14 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 Hamap MF_00173 Arginine repressor [argR]. 1 155 41.54 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 Pfam PF02863 Arginine repressor, C-terminal domain 85 149 3.3E-17 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 SUPERFAMILY SSF55252 86 137 1.7E-10 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 Gene3D G3DSA:3.30.1360.40 77 152 2.6E-13 T 14-10-2018 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 SUPERFAMILY SSF46785 4 71 1.81E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 148 5.0E-5 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 Pfam PF01316 Arginine repressor, DNA binding domain 5 69 9.3E-19 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 JO41_01845 95217bd5c315e287bd4e8a7d998be8ed 157 Gene3D G3DSA:1.10.10.10 6 68 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1019 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 301 726 5.7E-174 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 SUPERFAMILY SSF89550 5 272 2.16E-37 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 Pfam PF01336 OB-fold nucleic acid binding domain 982 1056 2.3E-6 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 Pfam PF14579 Helix-hairpin-helix motif 799 888 6.5E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 Gene3D G3DSA:1.10.150.870 764 876 3.3E-7 T 14-10-2018 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 SMART SM00481 6 73 1.2E-31 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 Gene3D G3DSA:1.10.10.1600 434 509 4.7E-22 T 14-10-2018 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 Pfam PF02811 PHP domain 7 182 1.2E-53 T 14-10-2018 IPR004013 PHP domain GO:0003824 JO41_09550 1d0b2750752f37d709435f6b94668e57 1143 Gene3D G3DSA:3.20.20.140 2 279 5.1E-111 T 14-10-2018 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Gene3D G3DSA:3.40.50.300 466 730 1.9E-97 T 14-10-2018 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Gene3D G3DSA:3.90.1570.50 32 267 2.1E-91 T 14-10-2018 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 37 721 1.7E-203 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 SUPERFAMILY SSF52540 306 716 2.73E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Gene3D G3DSA:3.40.50.300 274 465 2.6E-73 T 14-10-2018 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Gene3D G3DSA:1.20.58.2040 731 884 6.7E-70 T 14-10-2018 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Gene3D G3DSA:3.90.640.50 59 131 2.1E-91 T 14-10-2018 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 727 1030 9.0E-68 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Pfam PF04851 Type III restriction enzyme, res subunit 275 442 3.1E-36 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 SMART SM00487 271 468 6.6E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 33 222 2.1E-50 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 Gene3D G3DSA:1.10.10.2110 794 835 6.7E-70 T 14-10-2018 JO41_06805 9f0ffb067b2df52ed85be47250b3caae 1037 SUPERFAMILY SSF52540 232 444 3.55E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10650 d29f26ad71b672853b2b4f6f2a87b25e 124 Pfam PF04343 Protein of unknown function, DUF488 6 115 5.4E-23 T 14-10-2018 IPR007438 Protein of unknown function DUF488 JO41_09870 d4b18bdec41b2762a1b67ff5ff4f3d2b 103 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 13 86 4.0E-13 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 JO41_09870 d4b18bdec41b2762a1b67ff5ff4f3d2b 103 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 13 89 1.0E-13 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 JO41_10605 97fc27495256cbd6fe260ae67b83b406 355 Gene3D G3DSA:1.25.40.10 67 264 5.3E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10605 97fc27495256cbd6fe260ae67b83b406 355 Pfam PF13176 Tetratricopeptide repeat 177 205 9.4E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_10605 97fc27495256cbd6fe260ae67b83b406 355 SUPERFAMILY SSF48452 93 206 2.65E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10605 97fc27495256cbd6fe260ae67b83b406 355 SMART SM00028 175 208 8.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 Gene3D G3DSA:3.10.580.10 19 168 1.1E-56 T 14-10-2018 JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 SMART SM01091 174 252 6.9E-26 T 14-10-2018 IPR005170 Transporter-associated domain JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 Gene3D G3DSA:3.30.465.10 169 256 4.0E-23 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 SUPERFAMILY SSF54631 35 175 9.73E-33 T 14-10-2018 JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 SMART SM00116 49 98 0.023 T 14-10-2018 IPR000644 CBS domain JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 SMART SM00116 111 159 62.0 T 14-10-2018 IPR000644 CBS domain JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 Pfam PF00571 CBS domain 40 95 7.9E-5 T 14-10-2018 IPR000644 CBS domain JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 Pfam PF00571 CBS domain 110 159 2.0E-4 T 14-10-2018 IPR000644 CBS domain JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 SUPERFAMILY SSF56176 172 254 4.09E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_09970 e5409f57721e5b5ddc1db08c8aa9d9cb 256 Pfam PF03471 Transporter associated domain 176 249 1.8E-22 T 14-10-2018 IPR005170 Transporter-associated domain JO41_10965 2834c89ec78f801637a30f3e564ae548 567 Pfam PF00664 ABC transporter transmembrane region 28 307 1.9E-14 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_10965 2834c89ec78f801637a30f3e564ae548 567 Gene3D G3DSA:1.20.1560.10 13 335 4.2E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10965 2834c89ec78f801637a30f3e564ae548 567 SMART SM00382 377 563 6.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10965 2834c89ec78f801637a30f3e564ae548 567 SUPERFAMILY SSF90123 16 342 1.83E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10965 2834c89ec78f801637a30f3e564ae548 567 SUPERFAMILY SSF52540 355 560 5.99E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10965 2834c89ec78f801637a30f3e564ae548 567 Gene3D G3DSA:3.40.50.300 353 564 9.9E-66 T 14-10-2018 JO41_10965 2834c89ec78f801637a30f3e564ae548 567 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10965 2834c89ec78f801637a30f3e564ae548 567 Pfam PF00005 ABC transporter 368 517 1.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 Pfam PF08402 TOBE domain 288 359 1.0E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 Pfam PF00005 ABC transporter 27 168 8.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 Gene3D G3DSA:2.40.50.940 229 359 1.0E-12 T 14-10-2018 JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 Gene3D G3DSA:2.40.50.140 294 353 1.0E-12 T 14-10-2018 JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 SUPERFAMILY SSF52540 6 250 4.17E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 SMART SM00382 35 218 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 Gene3D G3DSA:3.40.50.300 6 228 4.9E-66 T 14-10-2018 JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 SUPERFAMILY SSF50331 245 362 9.64E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO41_02485 c0ed06592888bf7a05a080d712d0dff7 363 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_00335 e49233cc7d5b622a3a1406f82c8501bd 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 117 5.0E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JO41_00335 e49233cc7d5b622a3a1406f82c8501bd 121 SUPERFAMILY SSF54593 1 120 6.71E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO41_00335 e49233cc7d5b622a3a1406f82c8501bd 121 Gene3D G3DSA:3.10.180.10 1 121 1.5E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO41_09355 1e99c8747e881eb08136ba59a53e576a 306 Pfam PF13518 Helix-turn-helix domain 11 60 8.2E-8 T 14-10-2018 JO41_09355 1e99c8747e881eb08136ba59a53e576a 306 Gene3D G3DSA:3.30.420.10 126 306 2.6E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_09355 1e99c8747e881eb08136ba59a53e576a 306 Pfam PF00665 Integrase core domain 136 255 8.8E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JO41_09355 1e99c8747e881eb08136ba59a53e576a 306 SUPERFAMILY SSF46689 9 111 1.79E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_09355 1e99c8747e881eb08136ba59a53e576a 306 SUPERFAMILY SSF53098 135 303 2.02E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_00190 1c61347e61e0abb8b8f07c25aa66e004 170 Pfam PF00462 Glutaredoxin 87 137 2.2E-7 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JO41_00190 1c61347e61e0abb8b8f07c25aa66e004 170 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 25 56 2.0E-8 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JO41_00190 1c61347e61e0abb8b8f07c25aa66e004 170 Gene3D G3DSA:3.40.30.10 86 152 1.7E-8 T 14-10-2018 JO41_00190 1c61347e61e0abb8b8f07c25aa66e004 170 SUPERFAMILY SSF52833 87 157 5.96E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO41_12140 226e85528128f8c1bafe711aaf2f899f 230 Pfam PF02527 rRNA small subunit methyltransferase G 27 195 1.0E-41 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO41_12140 226e85528128f8c1bafe711aaf2f899f 230 Gene3D G3DSA:3.40.50.150 4 229 2.0E-51 T 14-10-2018 JO41_12140 226e85528128f8c1bafe711aaf2f899f 230 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 30 223 2.6E-37 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO41_12140 226e85528128f8c1bafe711aaf2f899f 230 SUPERFAMILY SSF53335 20 225 2.84E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_12140 226e85528128f8c1bafe711aaf2f899f 230 PIRSF PIRSF003078 5 228 7.0E-48 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO41_12140 226e85528128f8c1bafe711aaf2f899f 230 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 18 222 21.281 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 SUPERFAMILY SSF48163 314 502 2.09E-35 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 Gene3D G3DSA:1.10.10.350 402 506 5.8E-24 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 7.9E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 7.9E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 7.9E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 7.9E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 7.9E-25 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 502 2.0E-167 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 Gene3D G3DSA:3.40.50.620 1 329 2.4E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 502 32.028 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 SUPERFAMILY SSF52374 4 313 1.74E-109 T 14-10-2018 JO41_05060 f06f338723dcf047c2bdda3a61f9ab91 507 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 320 1.5E-102 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 JO41_05690 9604187097d56a375f376e59931fb4a7 185 SUPERFAMILY SSF52091 28 128 9.22E-21 T 14-10-2018 IPR036513 STAS domain superfamily JO41_05690 9604187097d56a375f376e59931fb4a7 185 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 25 124 5.9E-18 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 JO41_05690 9604187097d56a375f376e59931fb4a7 185 Pfam PF01740 STAS domain 25 124 8.6E-15 T 14-10-2018 IPR002645 STAS domain JO41_05690 9604187097d56a375f376e59931fb4a7 185 Gene3D G3DSA:3.30.750.24 14 137 4.1E-24 T 14-10-2018 IPR036513 STAS domain superfamily JO41_08275 bbce271c240dadb4443822ab80ebe135 434 Gene3D G3DSA:3.40.50.300 13 234 1.6E-43 T 14-10-2018 JO41_08275 bbce271c240dadb4443822ab80ebe135 434 Pfam PF17288 Terminase RNAseH like domain 328 426 4.9E-6 T 14-10-2018 IPR035413 Phage terminase large subunit, C-terminal JO41_08275 bbce271c240dadb4443822ab80ebe135 434 Gene3D G3DSA:3.30.420.280 239 433 1.4E-40 T 14-10-2018 JO41_08275 bbce271c240dadb4443822ab80ebe135 434 Pfam PF04466 Phage terminase large subunit 30 232 1.3E-31 T 14-10-2018 IPR035412 Phage terminase large subunit, N-terminal JO41_08275 bbce271c240dadb4443822ab80ebe135 434 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 29 426 1.2E-33 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 856 22.681 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 SUPERFAMILY SSF52374 2 676 1.42E-136 T 14-10-2018 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Gene3D G3DSA:3.10.20.590 796 856 4.5E-20 T 14-10-2018 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Gene3D G3DSA:1.10.730.10 6 786 0.0 T 14-10-2018 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 415 2.0E-64 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 4.9E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 503 521 4.9E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 187 200 4.9E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 129 146 4.9E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 4.9E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 4.9E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 155 171 4.9E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Gene3D G3DSA:3.90.740.10 228 427 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Gene3D G3DSA:3.40.50.620 34 584 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Pfam PF08264 Anticodon-binding domain of tRNA 705 817 6.2E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 SUPERFAMILY SSF50677 227 428 6.28E-51 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Gene3D G3DSA:3.10.330.110 585 637 0.0 T 14-10-2018 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 SUPERFAMILY SSF47323 671 855 7.29E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_00250 7293551d01cb65c3546853c37117a3a2 856 Pfam PF09334 tRNA synthetases class I (M) 42 184 3.4E-19 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_05025 e56fd82303179feb7d2191f2287ba170 454 Pfam PF13392 HNH endonuclease 127 164 5.7E-7 T 14-10-2018 IPR003615 HNH nuclease JO41_05025 e56fd82303179feb7d2191f2287ba170 454 Gene3D G3DSA:3.90.75.20 73 173 2.0E-10 T 14-10-2018 JO41_05025 e56fd82303179feb7d2191f2287ba170 454 SUPERFAMILY SSF54060 77 164 5.18E-8 T 14-10-2018 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 Gene3D G3DSA:1.20.1330.10 42 173 9.4E-44 T 14-10-2018 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 Gene3D G3DSA:1.20.1330.10 193 244 5.2E-40 T 14-10-2018 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 SUPERFAMILY SSF64518 1 285 3.79E-82 T 14-10-2018 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 PRINTS PR00207 Flagellin signature 74 93 3.3E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 PRINTS PR00207 Flagellin signature 109 132 3.3E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 PRINTS PR00207 Flagellin signature 35 52 3.3E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 Gene3D G3DSA:1.20.58.1830 250 284 5.2E-40 T 14-10-2018 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 Pfam PF00700 Bacterial flagellin C-terminal helical region 200 284 2.5E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_03555 3c7eb670d9f6fd22c05d1247cfb72cf5 285 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 3.4E-37 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_04860 9a2c518002b9561176d91da2f4aaaa02 155 SUPERFAMILY SSF55729 1 153 4.19E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_04860 9a2c518002b9561176d91da2f4aaaa02 155 Gene3D G3DSA:3.40.630.30 3 152 2.1E-22 T 14-10-2018 JO41_04860 9a2c518002b9561176d91da2f4aaaa02 155 Pfam PF00583 Acetyltransferase (GNAT) family 32 129 3.5E-14 T 14-10-2018 IPR000182 GNAT domain JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 Pfam PF06971 Putative DNA-binding protein N-terminus 6 53 1.1E-14 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 SUPERFAMILY SSF51735 85 207 1.67E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 Gene3D G3DSA:1.10.10.10 1 79 3.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 SMART SM00881 81 181 4.8E-13 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 Gene3D G3DSA:3.40.50.720 80 215 1.4E-40 T 14-10-2018 JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 SUPERFAMILY SSF46785 11 79 1.03E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 28.277 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 JO41_00325 6ac1f3f2c1e587cd8048594ef0ffd690 215 Pfam PF02629 CoA binding domain 85 179 9.4E-22 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 Gene3D G3DSA:1.20.120.1080 384 484 1.5E-11 T 14-10-2018 JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 SMART SM00847 401 493 1.3E-20 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 SMART SM00487 4 188 7.7E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 Pfam PF00270 DEAD/DEAH box helicase 14 164 2.4E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 Pfam PF00271 Helicase conserved C-terminal domain 210 340 1.5E-14 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 SMART SM00490 244 341 3.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 Gene3D G3DSA:3.40.50.300 1 180 5.4E-75 T 14-10-2018 JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 553 624 4.5E-7 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 121 130 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 Pfam PF04408 Helicase associated domain (HA2) 402 491 6.2E-13 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 SUPERFAMILY SSF52540 7 515 2.04E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03580 df633f96af8b935bf0f70f717cb25b8b 893 Gene3D G3DSA:3.40.50.300 182 360 2.0E-54 T 14-10-2018 JO41_02740 fde3a70999d9898d1eeb01c0239b6242 414 SUPERFAMILY SSF64518 1 414 1.44E-53 T 14-10-2018 JO41_02740 fde3a70999d9898d1eeb01c0239b6242 414 Pfam PF00700 Bacterial flagellin C-terminal helical region 331 413 3.6E-7 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_02740 fde3a70999d9898d1eeb01c0239b6242 414 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 3 413 2.6E-91 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 JO41_02740 fde3a70999d9898d1eeb01c0239b6242 414 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 9.5E-16 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_02740 fde3a70999d9898d1eeb01c0239b6242 414 Pfam PF07196 Flagellin hook IN motif 211 263 3.2E-5 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JO41_02740 fde3a70999d9898d1eeb01c0239b6242 414 Gene3D G3DSA:1.20.1330.10 41 264 1.2E-31 T 14-10-2018 JO41_05200 826e6f7b216e7ca71c31bd929f9a6410 69 SUPERFAMILY SSF64307 3 69 1.7E-14 T 14-10-2018 IPR036868 TusA-like domain superfamily JO41_05200 826e6f7b216e7ca71c31bd929f9a6410 69 Pfam PF01206 Sulfurtransferase TusA 6 69 1.8E-16 T 14-10-2018 IPR001455 TusA-like domain JO41_05200 826e6f7b216e7ca71c31bd929f9a6410 69 Gene3D G3DSA:3.30.110.40 4 69 2.0E-19 T 14-10-2018 IPR036868 TusA-like domain superfamily JO41_01940 c785dc02780667dea1235c1d77820d29 606 SUPERFAMILY SSF52096 26 285 8.2E-16 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_01940 c785dc02780667dea1235c1d77820d29 606 Gene3D G3DSA:3.40.1750.10 186 499 9.6E-129 T 14-10-2018 JO41_01940 c785dc02780667dea1235c1d77820d29 606 Gene3D G3DSA:3.90.226.10 94 315 9.6E-129 T 14-10-2018 JO41_01940 c785dc02780667dea1235c1d77820d29 606 Pfam PF01343 Peptidase family S49 393 543 7.2E-39 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JO41_01940 c785dc02780667dea1235c1d77820d29 606 Pfam PF01343 Peptidase family S49 139 287 4.7E-23 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JO41_01940 c785dc02780667dea1235c1d77820d29 606 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 14 567 2.5E-166 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 JO41_01940 c785dc02780667dea1235c1d77820d29 606 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 540 1.6E-46 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 JO41_01940 c785dc02780667dea1235c1d77820d29 606 PIRSF PIRSF001217 5 601 3.4E-191 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 JO41_01940 c785dc02780667dea1235c1d77820d29 606 SUPERFAMILY SSF52096 316 530 3.16E-38 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_01940 c785dc02780667dea1235c1d77820d29 606 Gene3D G3DSA:3.90.226.10 316 541 9.6E-129 T 14-10-2018 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 SUPERFAMILY SSF52540 190 482 3.34E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 PIRSF PIRSF006485 47 491 3.3E-135 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 Gene3D G3DSA:3.30.300.20 403 486 8.9E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 SUPERFAMILY SSF52540 51 213 3.64E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 226 391 6.5E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 48 209 2.4E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 403 482 3.5E-21 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 249 1.2E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 299 317 1.2E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 Pfam PF01926 50S ribosome-binding GTPase 51 170 5.2E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 Pfam PF01926 50S ribosome-binding GTPase 228 346 1.6E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 Gene3D G3DSA:3.40.50.300 223 400 2.6E-49 T 14-10-2018 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 49 483 1.5E-138 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 Gene3D G3DSA:3.40.50.300 43 216 3.4E-35 T 14-10-2018 JO41_07115 c7f64f0403eb3dbf1d623d2ef90b0c96 495 Hamap MF_00195 GTPase Der [der]. 48 486 31.591 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JO41_04105 ff4ac4bc2ffdfee378a65f414775a195 340 SUPERFAMILY SSF53822 31 248 7.07E-13 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO41_04105 ff4ac4bc2ffdfee378a65f414775a195 340 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 30 310 8.7E-55 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 JO41_04105 ff4ac4bc2ffdfee378a65f414775a195 340 Gene3D G3DSA:3.40.50.2300 140 334 3.1E-105 T 14-10-2018 JO41_04105 ff4ac4bc2ffdfee378a65f414775a195 340 Gene3D G3DSA:3.40.50.2300 32 299 3.1E-105 T 14-10-2018 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 Gene3D G3DSA:2.40.50.140 1 114 3.1E-46 T 14-10-2018 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 SUPERFAMILY SSF50249 2 122 2.57E-48 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.2E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 SMART SM01382 124 251 1.8E-84 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.63 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 SUPERFAMILY SSF50104 128 269 7.22E-59 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 Gene3D G3DSA:4.10.950.10 197 273 3.7E-35 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 PIRSF PIRSF002158 16 273 3.5E-98 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 249 1.4E-53 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 SMART SM01383 42 118 8.3E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.3E-131 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JO41_04455 64808c0fde181f20f3f6f08cd9c4bf85 273 Gene3D G3DSA:2.30.30.30 118 196 2.8E-29 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO41_03535 42a374ec820e5a060187db4137a07ca6 936 SUPERFAMILY SSF69318 806 932 7.19E-8 T 14-10-2018 JO41_03535 42a374ec820e5a060187db4137a07ca6 936 SUPERFAMILY SSF101898 590 886 3.14E-5 T 14-10-2018 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 SMART SM00493 257 328 5.6E-17 T 14-10-2018 IPR006171 TOPRIM domain JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Pfam PF10410 DnaB-helicase binding domain of primase 364 417 5.0E-6 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 SMART SM00400 35 89 3.7E-33 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Gene3D G3DSA:3.90.580.10 1 100 9.8E-38 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Pfam PF13662 Toprim domain 258 333 6.8E-18 T 14-10-2018 IPR006171 TOPRIM domain JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Pfam PF01807 CHC2 zinc finger 5 98 9.6E-39 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 249 4.9E-34 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 TIGRFAM TIGR01391 dnaG: DNA primase 4 412 1.9E-139 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Gene3D G3DSA:3.40.1360.10 239 363 1.8E-39 T 14-10-2018 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 PIRSF PIRSF002811 1 586 4.3E-173 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Gene3D G3DSA:3.90.980.10 109 238 1.1E-35 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 SUPERFAMILY SSF56731 115 419 2.62E-92 T 14-10-2018 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 SUPERFAMILY SSF57783 1 96 1.45E-35 T 14-10-2018 JO41_10675 527c3c0d89545d7f1da2a11c85e3f226 595 Hamap MF_00974 DNA primase [dnaG]. 3 579 26.27 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 147 156 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 214 321 2.4E-27 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 SUPERFAMILY SSF53738 33 242 2.39E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 Gene3D G3DSA:3.40.120.10 330 457 1.3E-34 T 14-10-2018 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 SUPERFAMILY SSF55957 448 582 1.7E-12 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 330 455 1.6E-20 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 SUPERFAMILY SSF53738 213 320 1.26E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 Gene3D G3DSA:3.40.120.10 39 196 2.1E-47 T 14-10-2018 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 146 160 4.6E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 301 316 4.6E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 254 4.6E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 46 189 2.1E-42 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 568 4.8E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 Gene3D G3DSA:3.40.120.10 213 329 1.2E-24 T 14-10-2018 JO41_12155 f1f0d54c729ee41bb3d65326c629eeeb 585 SUPERFAMILY SSF53738 309 456 3.69E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_00415 cfa6840d0c0851a5e81cdfbe3f2df47e 213 Gene3D G3DSA:1.10.357.10 3 206 8.4E-17 T 14-10-2018 JO41_00415 cfa6840d0c0851a5e81cdfbe3f2df47e 213 SUPERFAMILY SSF46689 3 76 5.13E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_00415 cfa6840d0c0851a5e81cdfbe3f2df47e 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_00415 cfa6840d0c0851a5e81cdfbe3f2df47e 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_00415 cfa6840d0c0851a5e81cdfbe3f2df47e 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 59 2.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 Gene3D G3DSA:3.30.420.40 197 411 3.5E-75 T 14-10-2018 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 SUPERFAMILY SSF53067 159 401 2.16E-84 T 14-10-2018 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 PRINTS PR00471 Acetate kinase family signature 3 14 6.2E-36 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 PRINTS PR00471 Acetate kinase family signature 324 340 6.2E-36 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 PRINTS PR00471 Acetate kinase family signature 174 187 6.2E-36 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 PRINTS PR00471 Acetate kinase family signature 204 225 6.2E-36 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 PRINTS PR00471 Acetate kinase family signature 301 314 6.2E-36 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 PRINTS PR00471 Acetate kinase family signature 381 393 6.2E-36 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 Pfam PF00871 Acetokinase family 3 392 8.7E-141 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 Hamap MF_00020 Acetate kinase [ackA]. 1 403 173.68 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 SUPERFAMILY SSF53067 1 197 4.92E-63 T 14-10-2018 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 TIGRFAM TIGR00016 ackA: acetate kinase 1 400 1.0E-146 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 Gene3D G3DSA:3.30.420.40 1 196 4.4E-67 T 14-10-2018 JO41_02620 ad20064d5ebb3dbec6f7adc737b86ddb 449 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JO41_11045 a945bcf4c6722f4d97cd764c7a69b8c4 235 Gene3D G3DSA:3.40.50.300 1 192 2.1E-25 T 14-10-2018 JO41_11045 a945bcf4c6722f4d97cd764c7a69b8c4 235 PIRSF PIRSF005624 1 198 8.7E-49 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 JO41_11045 a945bcf4c6722f4d97cd764c7a69b8c4 235 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 164 1.3E-11 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JO41_11045 a945bcf4c6722f4d97cd764c7a69b8c4 235 SUPERFAMILY SSF52540 2 146 7.34E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 576 36.474 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 Gene3D G3DSA:3.30.70.3400 145 239 1.5E-20 T 14-10-2018 JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 SUPERFAMILY SSF82866 371 561 6.41E-40 T 14-10-2018 JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 Gene3D G3DSA:1.20.1640.10 387 569 1.5E-14 T 14-10-2018 JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 325 554 1.8E-76 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 145 560 3.3E-135 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 Gene3D G3DSA:3.30.1360.200 278 386 3.0E-25 T 14-10-2018 JO41_03425 4895264b40280ec7aa7567bcbf958c80 581 Pfam PF02355 Protein export membrane protein 395 560 1.9E-20 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 Pfam PF01145 SPFH domain / Band 7 family 21 191 6.1E-33 T 14-10-2018 IPR001107 Band 7 domain JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 Gene3D G3DSA:3.30.479.30 45 177 1.6E-46 T 14-10-2018 JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 PRINTS PR00721 Stomatin signature 24 46 2.6E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 PRINTS PR00721 Stomatin signature 127 150 2.6E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 PRINTS PR00721 Stomatin signature 151 169 2.6E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 PRINTS PR00721 Stomatin signature 72 93 2.6E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 PRINTS PR00721 Stomatin signature 170 191 2.6E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 PRINTS PR00721 Stomatin signature 107 124 2.6E-35 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 SUPERFAMILY SSF117892 48 182 1.1E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 SMART SM00244 17 175 1.3E-52 T 14-10-2018 IPR001107 Band 7 domain JO41_11015 637d30693bda482720f1002c4d9fbcf0 292 ProSitePatterns PS01270 Band 7 protein family signature. 131 159 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site JO41_02295 a8f8176ef9cf7a5952743ec4c7be1512 221 Pfam PF10895 Domain of unknown function (DUF2715) 61 187 5.6E-6 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO41_02640 49ccfa4ce88b7eec3f0b5aafa126ec63 746 Gene3D G3DSA:3.20.70.20 1 746 1.4E-282 T 14-10-2018 JO41_02640 49ccfa4ce88b7eec3f0b5aafa126ec63 746 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 9 745 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 JO41_02640 49ccfa4ce88b7eec3f0b5aafa126ec63 746 Pfam PF01228 Glycine radical 620 727 3.0E-40 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 JO41_02640 49ccfa4ce88b7eec3f0b5aafa126ec63 746 ProSitePatterns PS00850 Glycine radical domain signature. 716 724 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JO41_02640 49ccfa4ce88b7eec3f0b5aafa126ec63 746 PIRSF PIRSF000379 5 746 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 JO41_02640 49ccfa4ce88b7eec3f0b5aafa126ec63 746 SUPERFAMILY SSF51998 6 744 2.29E-264 T 14-10-2018 JO41_02640 49ccfa4ce88b7eec3f0b5aafa126ec63 746 Pfam PF02901 Pyruvate formate lyase-like 21 604 4.1E-195 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 JO41_02835 bb7310133b68f0e805188c031bad8cfc 137 SUPERFAMILY SSF53927 6 128 5.69E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JO41_02835 bb7310133b68f0e805188c031bad8cfc 137 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 98 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JO41_02835 bb7310133b68f0e805188c031bad8cfc 137 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 102 6.1E-17 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JO41_02835 bb7310133b68f0e805188c031bad8cfc 137 Gene3D G3DSA:3.40.140.10 1 134 1.3E-47 T 14-10-2018 JO41_02835 bb7310133b68f0e805188c031bad8cfc 137 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 8 125 3.1E-40 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 JO41_01770 623ddee0900ab4ca5a7f69db6ea8c17d 228 Gene3D G3DSA:3.40.225.10 1 214 9.8E-63 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JO41_01770 623ddee0900ab4ca5a7f69db6ea8c17d 228 SMART SM01007 8 186 1.4E-57 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal JO41_01770 623ddee0900ab4ca5a7f69db6ea8c17d 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 185 1.8E-46 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal JO41_01770 623ddee0900ab4ca5a7f69db6ea8c17d 228 SUPERFAMILY SSF53639 2 214 4.51E-62 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JO41_06190 71b5641ea82bf68726f34377210fee64 699 SUPERFAMILY SSF103190 42 187 4.19E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_06190 71b5641ea82bf68726f34377210fee64 699 Pfam PF02743 Cache domain 37 273 5.3E-28 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_06190 71b5641ea82bf68726f34377210fee64 699 Gene3D G3DSA:1.20.1480.50 276 370 8.3E-12 T 14-10-2018 JO41_06190 71b5641ea82bf68726f34377210fee64 699 Gene3D G3DSA:3.30.450.20 146 275 1.8E-21 T 14-10-2018 JO41_06190 71b5641ea82bf68726f34377210fee64 699 SUPERFAMILY SSF58104 333 435 8.37E-9 T 14-10-2018 JO41_06190 71b5641ea82bf68726f34377210fee64 699 SMART SM00283 408 655 4.2E-61 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_06190 71b5641ea82bf68726f34377210fee64 699 SMART SM00304 311 365 1.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06190 71b5641ea82bf68726f34377210fee64 699 SUPERFAMILY SSF58104 420 652 1.26E-43 T 14-10-2018 JO41_06190 71b5641ea82bf68726f34377210fee64 699 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 622 6.3E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_06190 71b5641ea82bf68726f34377210fee64 699 Gene3D G3DSA:1.10.287.950 390 697 1.5E-48 T 14-10-2018 JO41_06190 71b5641ea82bf68726f34377210fee64 699 Pfam PF00672 HAMP domain 311 357 1.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_09700 400219a5330cb756ff6961706484df9c 541 SUPERFAMILY SSF52540 2 196 2.37E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09700 400219a5330cb756ff6961706484df9c 541 Gene3D G3DSA:3.40.50.300 328 514 3.6E-25 T 14-10-2018 JO41_09700 400219a5330cb756ff6961706484df9c 541 ProSitePatterns PS00211 ABC transporters family signature. 442 456 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_09700 400219a5330cb756ff6961706484df9c 541 ProSitePatterns PS00211 ABC transporters family signature. 111 125 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_09700 400219a5330cb756ff6961706484df9c 541 Pfam PF00005 ABC transporter 344 470 9.2E-11 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09700 400219a5330cb756ff6961706484df9c 541 Pfam PF00005 ABC transporter 31 139 7.1E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09700 400219a5330cb756ff6961706484df9c 541 SMART SM00382 29 183 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09700 400219a5330cb756ff6961706484df9c 541 SMART SM00382 349 525 1.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09700 400219a5330cb756ff6961706484df9c 541 SUPERFAMILY SSF52540 344 505 2.1E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09700 400219a5330cb756ff6961706484df9c 541 Gene3D G3DSA:3.40.50.300 1 197 1.3E-39 T 14-10-2018 JO41_03020 5653658fa6f87b740a9637b60be9dc18 294 SMART SM00470 29 118 6.3E-39 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JO41_03020 5653658fa6f87b740a9637b60be9dc18 294 SUPERFAMILY SSF110849 29 120 7.59E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JO41_03020 5653658fa6f87b740a9637b60be9dc18 294 Gene3D G3DSA:1.10.10.2830 106 218 3.6E-38 T 14-10-2018 JO41_03020 5653658fa6f87b740a9637b60be9dc18 294 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 200 4.8E-57 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 JO41_03020 5653658fa6f87b740a9637b60be9dc18 294 Pfam PF02195 ParB-like nuclease domain 30 118 1.6E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JO41_03020 5653658fa6f87b740a9637b60be9dc18 294 SUPERFAMILY SSF109709 110 220 1.6E-32 T 14-10-2018 JO41_03020 5653658fa6f87b740a9637b60be9dc18 294 Gene3D G3DSA:3.90.1530.30 42 104 6.2E-27 T 14-10-2018 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 65 6.0E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.511 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 SUPERFAMILY SSF143034 2 62 9.42E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 Pfam PF01632 Ribosomal protein L35 2 61 2.3E-24 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 Gene3D G3DSA:2.40.50.530 1 65 1.3E-23 T 14-10-2018 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO41_03870 4aae842fd6eb53e1ee7fe5a81489d847 68 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JO41_02875 10242c3e8c98c2dbf630dfa3c7e738d9 210 SUPERFAMILY SSF52540 8 188 2.66E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02875 10242c3e8c98c2dbf630dfa3c7e738d9 210 SMART SM00382 6 192 0.0082 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02875 10242c3e8c98c2dbf630dfa3c7e738d9 210 Pfam PF03266 NTPase 92 193 1.1E-8 T 14-10-2018 IPR004948 Nucleoside-triphosphatase, THEP1 type GO:0098519 KEGG: 00230+3.6.1.15|KEGG: 00730+3.6.1.15|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210 JO41_02875 10242c3e8c98c2dbf630dfa3c7e738d9 210 Gene3D G3DSA:3.40.50.300 9 198 2.2E-17 T 14-10-2018 JO41_10175 f0610a0ad806dde996c9cbb071885fc0 72 SUPERFAMILY SSF50249 2 70 1.49E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_10175 f0610a0ad806dde996c9cbb071885fc0 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.8E-26 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 JO41_10175 f0610a0ad806dde996c9cbb071885fc0 72 SMART SM00316 4 72 5.4E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_10175 f0610a0ad806dde996c9cbb071885fc0 72 Gene3D G3DSA:2.40.50.140 2 70 3.1E-35 T 14-10-2018 JO41_10175 f0610a0ad806dde996c9cbb071885fc0 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.1E-34 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JO41_10175 f0610a0ad806dde996c9cbb071885fc0 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.954 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JO41_09765 90fae05d0893a5582b321c30cd574137 406 SUPERFAMILY SSF50447 6 91 5.3E-14 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_09765 90fae05d0893a5582b321c30cd574137 406 SMART SM00863 189 231 1.5E-12 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO41_09765 90fae05d0893a5582b321c30cd574137 406 Gene3D G3DSA:2.40.30.130 1 94 3.1E-22 T 14-10-2018 JO41_09765 90fae05d0893a5582b321c30cd574137 406 Gene3D G3DSA:3.30.980.10 95 248 9.7E-42 T 14-10-2018 JO41_09765 90fae05d0893a5582b321c30cd574137 406 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 189 229 1.8E-9 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO41_09765 90fae05d0893a5582b321c30cd574137 406 SUPERFAMILY SSF55186 95 235 2.22E-32 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JO41_09765 90fae05d0893a5582b321c30cd574137 406 Pfam PF01411 tRNA synthetases class II (A) 31 96 2.5E-9 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 JO41_00785 c6a068063f0dcc870b8eea3c5b446837 292 Gene3D G3DSA:3.40.50.300 4 146 1.7E-5 T 14-10-2018 JO41_00785 c6a068063f0dcc870b8eea3c5b446837 292 SMART SM00382 13 153 0.0034 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_00785 c6a068063f0dcc870b8eea3c5b446837 292 SUPERFAMILY SSF52540 8 180 6.75E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 Gene3D G3DSA:3.40.50.880 287 533 2.5E-95 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 Pfam PF06418 CTP synthase N-terminus 5 269 8.5E-121 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 Gene3D G3DSA:3.40.50.300 1 286 2.0E-128 T 14-10-2018 JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 TIGRFAM TIGR00337 PyrG: CTP synthase 3 528 1.2E-230 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 SUPERFAMILY SSF52540 4 273 2.05E-118 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 SUPERFAMILY SSF52317 291 530 2.06E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 Hamap MF_01227 CTP synthase [pyrG]. 4 533 48.553 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JO41_11005 08151d7aac3b05748df76fdcd3b17fd9 533 Pfam PF00117 Glutamine amidotransferase class-I 304 526 6.9E-51 T 14-10-2018 IPR017926 Glutamine amidotransferase JO41_09400 efb47f5aadb0fdd9048a05809cf8fdbe 261 Gene3D G3DSA:3.40.220.10 41 261 4.2E-66 T 14-10-2018 JO41_09400 efb47f5aadb0fdd9048a05809cf8fdbe 261 SMART SM00506 86 226 5.9E-27 T 14-10-2018 IPR002589 Macro domain JO41_09400 efb47f5aadb0fdd9048a05809cf8fdbe 261 SUPERFAMILY SSF52949 87 260 1.5E-54 T 14-10-2018 JO41_09400 efb47f5aadb0fdd9048a05809cf8fdbe 261 Pfam PF01661 Macro domain 103 226 1.5E-34 T 14-10-2018 IPR002589 Macro domain JO41_03015 53680a290af824360b22140eecc3b89e 371 Pfam PF11187 Protein of unknown function (DUF2974) 87 313 6.5E-69 T 14-10-2018 IPR024499 Protein of unknown function DUF2974 JO41_03015 53680a290af824360b22140eecc3b89e 371 SUPERFAMILY SSF53474 151 363 5.5E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_03015 53680a290af824360b22140eecc3b89e 371 Gene3D G3DSA:3.40.50.1820 75 314 6.8E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_03015 53680a290af824360b22140eecc3b89e 371 SUPERFAMILY SSF53474 103 249 3.73E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 Gene3D G3DSA:3.40.50.300 2 209 9.8E-75 T 14-10-2018 JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 Gene3D G3DSA:3.40.50.300 216 441 5.7E-50 T 14-10-2018 JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 Pfam PF00270 DEAD/DEAH box helicase 27 193 1.3E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 Pfam PF03880 DbpA RNA binding domain 487 547 7.6E-10 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 Pfam PF00271 Helicase conserved C-terminal domain 229 337 8.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 SMART SM00490 256 337 6.7E-34 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 SUPERFAMILY SSF52540 72 358 7.2E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06370 dd6fd0573a4f87beea48dfa0af3d3f6a 614 SMART SM00487 22 220 1.4E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 Pfam PF00633 Helix-hairpin-helix motif 103 130 1.2E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 2.0E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 SMART SM00478 41 188 5.7E-55 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 Gene3D G3DSA:1.10.340.30 24 135 7.8E-72 T 14-10-2018 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 SUPERFAMILY SSF48150 7 207 5.97E-66 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 TIGRFAM TIGR01083 nth: endonuclease III 10 197 1.2E-80 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 169 2.0E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 Gene3D G3DSA:1.10.1670.10 14 206 7.8E-72 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 Hamap MF_00942 Endonuclease III [nth]. 3 212 36.313 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 PIRSF PIRSF001435 5 211 6.7E-45 T 14-10-2018 JO41_08060 5ec8a8ffba8bfd9181e1ef37aa7f8c51 213 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 JO41_09965 60d682b97578c784636a42da50d00659 153 Gene3D G3DSA:3.40.390.30 9 149 1.4E-38 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 JO41_09965 60d682b97578c784636a42da50d00659 153 SUPERFAMILY SSF55486 14 146 1.07E-35 T 14-10-2018 JO41_09965 60d682b97578c784636a42da50d00659 153 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 115 125 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site JO41_09965 60d682b97578c784636a42da50d00659 153 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 147 20.296 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JO41_09965 60d682b97578c784636a42da50d00659 153 Pfam PF02130 Uncharacterized protein family UPF0054 24 145 5.3E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JO41_09965 60d682b97578c784636a42da50d00659 153 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 145 1.5E-36 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JO41_01890 86c6eb44376c56a0969a238cd0b826db 323 SMART SM00342 234 317 1.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_01890 86c6eb44376c56a0969a238cd0b826db 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 1.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_01890 86c6eb44376c56a0969a238cd0b826db 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 1.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_01890 86c6eb44376c56a0969a238cd0b826db 323 Pfam PF12833 Helix-turn-helix domain 240 318 6.3E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_01890 86c6eb44376c56a0969a238cd0b826db 323 SUPERFAMILY SSF46689 271 318 8.24E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_01890 86c6eb44376c56a0969a238cd0b826db 323 Gene3D G3DSA:1.10.10.60 213 322 1.4E-21 T 14-10-2018 JO41_09690 410e104c8e7698874f96264a05c2a577 161 Pfam PF04205 FMN-binding domain 61 155 9.3E-10 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO41_09690 410e104c8e7698874f96264a05c2a577 161 PIRSF PIRSF036531 5 161 9.0E-36 T 14-10-2018 IPR017058 Major membrane immunogen, tpp15, predicted JO41_09690 410e104c8e7698874f96264a05c2a577 161 SMART SM00900 60 158 9.1E-9 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO41_09690 410e104c8e7698874f96264a05c2a577 161 Gene3D G3DSA:3.90.1010.20 45 161 9.9E-18 T 14-10-2018 JO41_01405 b8e651d655b33345cc9c57cfd7399881 244 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 229 27.724 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JO41_01405 b8e651d655b33345cc9c57cfd7399881 244 SUPERFAMILY SSF51419 5 228 3.93E-73 T 14-10-2018 IPR029066 PLP-binding barrel JO41_01405 b8e651d655b33345cc9c57cfd7399881 244 PIRSF PIRSF004848 1 236 1.4E-79 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JO41_01405 b8e651d655b33345cc9c57cfd7399881 244 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 230 6.7E-60 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JO41_01405 b8e651d655b33345cc9c57cfd7399881 244 Pfam PF01168 Alanine racemase, N-terminal domain 16 230 1.3E-25 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_01405 b8e651d655b33345cc9c57cfd7399881 244 Gene3D G3DSA:3.20.20.10 1 241 2.2E-90 T 14-10-2018 IPR029066 PLP-binding barrel JO41_10050 fe3850bf222a693ebdce31e06b4d6f67 212 Gene3D G3DSA:1.25.10.10 12 206 1.6E-16 T 14-10-2018 IPR011989 Armadillo-like helical JO41_10050 fe3850bf222a693ebdce31e06b4d6f67 212 SUPERFAMILY SSF48371 13 197 2.88E-20 T 14-10-2018 IPR016024 Armadillo-type fold JO41_09165 838a284c7dc6f0c8b56b41d668e489b1 272 SUPERFAMILY SSF161098 73 262 8.11E-25 T 14-10-2018 IPR035906 MetI-like superfamily JO41_09165 838a284c7dc6f0c8b56b41d668e489b1 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 258 1.5E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_09165 838a284c7dc6f0c8b56b41d668e489b1 272 Gene3D G3DSA:1.10.3720.10 72 271 7.3E-27 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00405 ef666add4379b944de53eb0805301ed8 537 Gene3D G3DSA:3.40.190.10 34 496 6.8E-95 T 14-10-2018 JO41_00405 ef666add4379b944de53eb0805301ed8 537 Gene3D G3DSA:3.10.105.10 289 492 6.8E-95 T 14-10-2018 JO41_00405 ef666add4379b944de53eb0805301ed8 537 SUPERFAMILY SSF53850 30 516 1.43E-85 T 14-10-2018 JO41_00405 ef666add4379b944de53eb0805301ed8 537 PIRSF PIRSF002741 6 521 3.6E-60 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO41_00405 ef666add4379b944de53eb0805301ed8 537 Gene3D G3DSA:3.90.76.10 60 184 6.8E-95 T 14-10-2018 JO41_00405 ef666add4379b944de53eb0805301ed8 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 441 2.4E-51 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 Gene3D G3DSA:2.40.50.940 224 291 9.8E-10 T 14-10-2018 JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 SUPERFAMILY SSF50331 238 368 3.23E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 Pfam PF00005 ABC transporter 22 163 3.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 366 5.0E-114 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 SUPERFAMILY SSF52540 6 244 7.23E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 Gene3D G3DSA:3.40.50.300 5 223 7.8E-70 T 14-10-2018 JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 SMART SM00382 30 213 5.9E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 Pfam PF08402 TOBE domain 287 367 2.1E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JO41_05710 46d6d1dc01c4844250424c092d93a3ee 373 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_06240 02377487dcbfb0cb20983fc862935152 215 Pfam PF13309 HTH domain 146 207 1.0E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain JO41_06240 02377487dcbfb0cb20983fc862935152 215 Pfam PF08348 YheO-like PAS domain 8 121 3.3E-36 T 14-10-2018 IPR013559 YheO-like JO41_06240 02377487dcbfb0cb20983fc862935152 215 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 114 2.0E-25 T 14-10-2018 IPR013559 YheO-like JO41_11030 514dd880939cae48632c4fda00d43c30 359 Gene3D G3DSA:3.40.50.620 1 206 1.9E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_11030 514dd880939cae48632c4fda00d43c30 359 Gene3D G3DSA:2.30.30.280 213 271 1.9E-16 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JO41_11030 514dd880939cae48632c4fda00d43c30 359 Gene3D G3DSA:2.40.30.10 272 354 5.9E-22 T 14-10-2018 JO41_11030 514dd880939cae48632c4fda00d43c30 359 Pfam PF03054 tRNA methyl transferase 1 348 1.5E-114 T 14-10-2018 JO41_11030 514dd880939cae48632c4fda00d43c30 359 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 348 4.1E-104 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JO41_11030 514dd880939cae48632c4fda00d43c30 359 SUPERFAMILY SSF52402 1 241 2.21E-50 T 14-10-2018 JO41_11030 514dd880939cae48632c4fda00d43c30 359 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 349 38.865 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Gene3D G3DSA:3.30.1490.70 69 296 1.5E-50 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 637 2.0E-166 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Gene3D G3DSA:3.40.50.10190 555 641 1.2E-24 T 14-10-2018 IPR036420 BRCT domain superfamily JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Gene3D G3DSA:3.30.470.30 61 238 1.5E-50 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 99 128 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 316 372 9.2E-17 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 SUPERFAMILY SSF52113 566 640 9.53E-15 T 14-10-2018 IPR036420 BRCT domain superfamily JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 SUPERFAMILY SSF56091 4 298 5.76E-62 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Hamap MF_01588 DNA ligase [ligA]. 1 641 42.028 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 566 641 6.7E-14 T 14-10-2018 IPR001357 BRCT domain JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Gene3D G3DSA:1.10.150.20 488 541 3.0E-8 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Pfam PF14520 Helix-hairpin-helix domain 426 473 0.0012 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Pfam PF14520 Helix-hairpin-helix domain 489 540 9.6E-6 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 SMART SM00532 2 423 1.8E-115 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Gene3D G3DSA:1.10.150.20 407 478 4.7E-12 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Gene3D G3DSA:2.40.50.140 298 370 6.7E-18 T 14-10-2018 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 2 296 1.6E-45 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 SUPERFAMILY SSF50249 299 373 1.37E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 PIRSF PIRSF001604 1 641 1.5E-170 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 SUPERFAMILY SSF47781 382 540 8.15E-33 T 14-10-2018 IPR010994 RuvA domain 2-like JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 SMART SM00292 565 641 1.1E-8 T 14-10-2018 IPR001357 BRCT domain JO41_01750 9bd0ba2ac7f64f88d26a3020427efa46 641 Gene3D G3DSA:1.10.287.610 1 56 6.7E-9 T 14-10-2018 JO41_06445 5ce746954795d75dca94f1735b0911e4 136 Hamap MF_00984 Single-stranded DNA-binding protein. 4 110 23.062 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO41_06445 5ce746954795d75dca94f1735b0911e4 136 Pfam PF00436 Single-strand binding protein family 4 105 1.3E-25 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JO41_06445 5ce746954795d75dca94f1735b0911e4 136 SUPERFAMILY SSF50249 3 116 9.25E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_06445 5ce746954795d75dca94f1735b0911e4 136 Gene3D G3DSA:2.40.50.140 1 106 2.5E-30 T 14-10-2018 JO41_06445 5ce746954795d75dca94f1735b0911e4 136 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 114 1.4E-26 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO41_06445 5ce746954795d75dca94f1735b0911e4 136 PIRSF PIRSF002070 1 134 9.4E-26 T 14-10-2018 JO41_10735 bded156975f927062d18b9d13f66139a 456 Pfam PF12631 MnmE helical domain 128 453 4.8E-41 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 JO41_10735 bded156975f927062d18b9d13f66139a 456 Pfam PF01926 50S ribosome-binding GTPase 223 334 7.9E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_10735 bded156975f927062d18b9d13f66139a 456 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 370 2.5E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_10735 bded156975f927062d18b9d13f66139a 456 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 456 29.008 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 JO41_10735 bded156975f927062d18b9d13f66139a 456 PRINTS PR00449 Transforming protein P21 ras signature 221 242 4.6E-5 T 14-10-2018 JO41_10735 bded156975f927062d18b9d13f66139a 456 PRINTS PR00449 Transforming protein P21 ras signature 261 283 4.6E-5 T 14-10-2018 JO41_10735 bded156975f927062d18b9d13f66139a 456 PRINTS PR00449 Transforming protein P21 ras signature 324 337 4.6E-5 T 14-10-2018 JO41_10735 bded156975f927062d18b9d13f66139a 456 Gene3D G3DSA:1.20.120.430 127 456 3.9E-91 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 JO41_10735 bded156975f927062d18b9d13f66139a 456 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 13 456 8.1E-110 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 JO41_10735 bded156975f927062d18b9d13f66139a 456 SUPERFAMILY SSF52540 79 370 1.33E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10735 bded156975f927062d18b9d13f66139a 456 Gene3D G3DSA:3.40.50.300 221 383 3.9E-91 T 14-10-2018 JO41_10735 bded156975f927062d18b9d13f66139a 456 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 125 6.7E-29 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 JO41_10735 bded156975f927062d18b9d13f66139a 456 Gene3D G3DSA:3.30.1360.120 2 125 8.6E-36 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JO41_09015 7b49c2e748445175bbc515e18b16416c 394 Gene3D G3DSA:3.30.70.2390 298 371 2.7E-5 T 14-10-2018 JO41_09015 7b49c2e748445175bbc515e18b16416c 394 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 92 196 1.5E-7 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JO41_09015 7b49c2e748445175bbc515e18b16416c 394 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 295 385 3.1E-10 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain JO41_09015 7b49c2e748445175bbc515e18b16416c 394 Gene3D G3DSA:1.10.260.150 56 297 4.3E-16 T 14-10-2018 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 121 131 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 120 237 1.2E-47 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 SUPERFAMILY SSF55973 239 387 1.96E-69 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 Gene3D G3DSA:3.30.300.10 7 240 1.7E-175 T 14-10-2018 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 Gene3D G3DSA:3.30.300.10 12 277 1.7E-175 T 14-10-2018 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 PIRSF PIRSF000497 1 388 2.4E-176 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 SUPERFAMILY SSF55973 117 238 1.98E-51 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 387 58.968 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 Gene3D G3DSA:3.30.300.10 104 381 1.7E-175 T 14-10-2018 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 SUPERFAMILY SSF55973 5 109 2.04E-42 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 239 376 4.7E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 386 3.8E-189 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 265 273 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_06490 fb7590282f6fba4b66d5c0e1531daa2b 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.1E-38 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JO41_02325 c5c415606e583d0fb547020e85b05987 172 Gene3D G3DSA:3.30.910.20 16 172 6.3E-19 T 14-10-2018 IPR024930 Skp domain superfamily JO41_02325 c5c415606e583d0fb547020e85b05987 172 SUPERFAMILY SSF111384 22 169 9.68E-20 T 14-10-2018 JO41_02325 c5c415606e583d0fb547020e85b05987 172 Pfam PF03938 Outer membrane protein (OmpH-like) 9 169 7.8E-22 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 JO41_02325 c5c415606e583d0fb547020e85b05987 172 SMART SM00935 10 170 3.9E-22 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 JO41_00270 c637c4460a9ac4ebf1468c8e7e193aa8 330 Pfam PF04055 Radical SAM superfamily 62 194 1.4E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_00270 c637c4460a9ac4ebf1468c8e7e193aa8 330 PIRSF PIRSF004869 3 303 3.7E-68 T 14-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted JO41_00270 c637c4460a9ac4ebf1468c8e7e193aa8 330 Pfam PF13353 4Fe-4S single cluster domain 54 147 5.3E-6 T 14-10-2018 JO41_00270 c637c4460a9ac4ebf1468c8e7e193aa8 330 ProSitePatterns PS01087 Radical activating enzymes signature. 55 76 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 JO41_00270 c637c4460a9ac4ebf1468c8e7e193aa8 330 Gene3D G3DSA:3.20.20.70 50 195 3.4E-14 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_00270 c637c4460a9ac4ebf1468c8e7e193aa8 330 SUPERFAMILY SSF102114 64 194 4.12E-11 T 14-10-2018 JO41_03840 86e05d36254e88206ce851a012b5082a 248 SUPERFAMILY SSF51735 4 246 1.17E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 Gene3D G3DSA:3.40.50.720 1 247 1.8E-78 T 14-10-2018 JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_03840 86e05d36254e88206ce851a012b5082a 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 2.6E-65 T 14-10-2018 JO41_03840 86e05d36254e88206ce851a012b5082a 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0047 T 14-10-2018 JO41_03840 86e05d36254e88206ce851a012b5082a 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 Gene3D G3DSA:3.40.50.300 3 170 8.8E-39 T 14-10-2018 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 SUPERFAMILY SSF46785 544 590 4.43E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 SUPERFAMILY SSF52540 4 168 1.42E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 SUPERFAMILY SSF50447 178 260 3.79E-13 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 Gene3D G3DSA:2.40.30.10 179 259 1.5E-18 T 14-10-2018 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 Pfam PF09107 Elongation factor SelB, winged helix 551 589 1.6E-10 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 Pfam PF00009 Elongation factor Tu GTP binding domain 5 167 5.1E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 Gene3D G3DSA:1.10.10.10 532 591 3.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 589 1.9E-84 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 PRINTS PR00315 GTP-binding elongation factor signature 72 83 6.5E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 PRINTS PR00315 GTP-binding elongation factor signature 4 17 6.5E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 PRINTS PR00315 GTP-binding elongation factor signature 56 66 6.5E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_01445 d7edd57aef4457738704a0d0d4e25f70 591 PRINTS PR00315 GTP-binding elongation factor signature 109 118 6.5E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_09515 a1c531a2102593186a39bd0fb3b5e963 386 Pfam PF13641 Glycosyltransferase like family 2 46 260 3.5E-21 T 14-10-2018 JO41_09515 a1c531a2102593186a39bd0fb3b5e963 386 SUPERFAMILY SSF53448 38 301 4.5E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_09515 a1c531a2102593186a39bd0fb3b5e963 386 Gene3D G3DSA:3.90.550.10 32 267 8.4E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_03125 73bd4429b6040ad66dd31cd507eb81f7 415 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 64 410 3.7E-41 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 JO41_03125 73bd4429b6040ad66dd31cd507eb81f7 415 Gene3D G3DSA:3.40.50.12580 213 397 7.2E-35 T 14-10-2018 JO41_03125 73bd4429b6040ad66dd31cd507eb81f7 415 SUPERFAMILY SSF53756 114 411 5.76E-12 T 14-10-2018 JO41_03125 73bd4429b6040ad66dd31cd507eb81f7 415 Gene3D G3DSA:3.40.50.11820 105 404 7.2E-35 T 14-10-2018 JO41_09960 796c8f92456649bd2632d8b5f25e9fa2 840 TIGRFAM TIGR00277 HDIG: HDIG domain 531 629 2.0E-29 T 14-10-2018 IPR006675 HDIG domain JO41_09960 796c8f92456649bd2632d8b5f25e9fa2 840 Pfam PF07697 7TM-HD extracellular 70 307 7.5E-30 T 14-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain JO41_09960 796c8f92456649bd2632d8b5f25e9fa2 840 Pfam PF07698 7TM receptor with intracellular HD hydrolase 322 509 1.9E-23 T 14-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain JO41_09960 796c8f92456649bd2632d8b5f25e9fa2 840 SUPERFAMILY SSF109604 532 676 6.0E-18 T 14-10-2018 JO41_09960 796c8f92456649bd2632d8b5f25e9fa2 840 Pfam PF01966 HD domain 534 674 1.1E-18 T 14-10-2018 IPR006674 HD domain JO41_09960 796c8f92456649bd2632d8b5f25e9fa2 840 SMART SM00471 530 684 1.8E-10 T 14-10-2018 IPR003607 HD/PDEase domain JO41_09960 796c8f92456649bd2632d8b5f25e9fa2 840 Gene3D G3DSA:1.10.3210.10 523 714 1.1E-21 T 14-10-2018 JO41_11190 cf1e04a3a7c34ab65548108f3eab8f44 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 193 28.361 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO41_11190 cf1e04a3a7c34ab65548108f3eab8f44 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 186 1.6E-45 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO41_11190 cf1e04a3a7c34ab65548108f3eab8f44 194 Pfam PF02545 Maf-like protein 4 188 1.3E-50 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO41_11190 cf1e04a3a7c34ab65548108f3eab8f44 194 PIRSF PIRSF006305 1 192 3.9E-48 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JO41_11190 cf1e04a3a7c34ab65548108f3eab8f44 194 SUPERFAMILY SSF52972 3 188 5.17E-54 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO41_11190 cf1e04a3a7c34ab65548108f3eab8f44 194 Gene3D G3DSA:3.90.950.10 1 192 6.5E-60 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO41_12070 26836c45ab2d1f81f62ea2f689c04169 303 Pfam PF00005 ABC transporter 82 228 2.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_12070 26836c45ab2d1f81f62ea2f689c04169 303 SMART SM00382 90 276 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_12070 26836c45ab2d1f81f62ea2f689c04169 303 Gene3D G3DSA:3.40.50.300 64 303 4.1E-67 T 14-10-2018 JO41_12070 26836c45ab2d1f81f62ea2f689c04169 303 SUPERFAMILY SSF52540 65 295 9.49E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12070 26836c45ab2d1f81f62ea2f689c04169 303 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 66 303 2.8E-111 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 JO41_00600 03f794bd5001ea189014c299ec3986bf 525 Gene3D G3DSA:3.90.550.10 16 131 3.4E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00600 03f794bd5001ea189014c299ec3986bf 525 Pfam PF13186 Iron-sulfur cluster-binding domain 455 518 2.3E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JO41_00600 03f794bd5001ea189014c299ec3986bf 525 TIGRFAM TIGR04321 spiroSPASM: spiro-SPASM protein 4 525 1.3E-160 T 14-10-2018 IPR027608 Spirochetes SPASM protein JO41_00600 03f794bd5001ea189014c299ec3986bf 525 SUPERFAMILY SSF53448 23 126 3.56E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00600 03f794bd5001ea189014c299ec3986bf 525 SUPERFAMILY SSF102114 260 519 1.41E-17 T 14-10-2018 JO41_07765 1727abdcdf42ea79f357f375ff17675c 159 Gene3D G3DSA:3.90.280.10 2 154 8.0E-54 T 14-10-2018 IPR036610 PEBP-like superfamily JO41_07765 1727abdcdf42ea79f357f375ff17675c 159 SUPERFAMILY SSF49777 10 153 4.06E-46 T 14-10-2018 IPR036610 PEBP-like superfamily JO41_07765 1727abdcdf42ea79f357f375ff17675c 159 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 31 153 2.3E-34 T 14-10-2018 IPR005247 YbhB/YbcL JO41_07765 1727abdcdf42ea79f357f375ff17675c 159 Pfam PF01161 Phosphatidylethanolamine-binding protein 23 153 5.8E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein JO41_02170 c4e74f6dec7f8b1676bd6d74e64e0890 86 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 84 8.5E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_02170 c4e74f6dec7f8b1676bd6d74e64e0890 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 84 4.4E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_02170 c4e74f6dec7f8b1676bd6d74e64e0890 86 SUPERFAMILY SSF143011 1 83 1.31E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_02170 c4e74f6dec7f8b1676bd6d74e64e0890 86 Gene3D G3DSA:3.30.2310.20 1 85 8.5E-27 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_04275 ac0838aac73a3fc73e020ebcd0a1f43f 211 Pfam PF12717 non-SMC mitotic condensation complex subunit 1 55 173 3.8E-6 T 14-10-2018 IPR032682 Condensin complex subunit 1, C-terminal JO41_04275 ac0838aac73a3fc73e020ebcd0a1f43f 211 Gene3D G3DSA:1.25.10.10 3 209 1.6E-20 T 14-10-2018 IPR011989 Armadillo-like helical JO41_04275 ac0838aac73a3fc73e020ebcd0a1f43f 211 SUPERFAMILY SSF48371 21 201 6.53E-20 T 14-10-2018 IPR016024 Armadillo-type fold JO41_11380 45163e6c55e176b535a1a5de14a09dca 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 2 204 4.7E-66 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO41_11380 45163e6c55e176b535a1a5de14a09dca 220 SUPERFAMILY SSF143548 16 134 7.85E-31 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JO41_11380 45163e6c55e176b535a1a5de14a09dca 220 PIRSF PIRSF036692 1 219 3.7E-80 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO41_11380 45163e6c55e176b535a1a5de14a09dca 220 Gene3D G3DSA:3.30.70.260 137 216 1.0E-12 T 14-10-2018 JO41_11380 45163e6c55e176b535a1a5de14a09dca 220 Pfam PF03315 Serine dehydratase beta chain 3 75 9.7E-12 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO41_11380 45163e6c55e176b535a1a5de14a09dca 220 Gene3D G3DSA:3.30.1330.90 10 134 1.4E-20 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JO41_11380 45163e6c55e176b535a1a5de14a09dca 220 SUPERFAMILY SSF55021 137 216 1.22E-14 T 14-10-2018 JO41_00985 3840acd20161f2bbe63133ea0d40b00d 431 Gene3D G3DSA:3.40.190.10 229 339 1.6E-13 T 14-10-2018 JO41_00985 3840acd20161f2bbe63133ea0d40b00d 431 Pfam PF08984 Domain of unknown function (DUF1858) 7 60 3.4E-14 T 14-10-2018 IPR015077 Domain of unknown function DUF1858 JO41_00985 3840acd20161f2bbe63133ea0d40b00d 431 Pfam PF13343 Bacterial extracellular solute-binding protein 167 406 1.2E-69 T 14-10-2018 JO41_00985 3840acd20161f2bbe63133ea0d40b00d 431 SUPERFAMILY SSF53850 126 391 3.75E-23 T 14-10-2018 JO41_00985 3840acd20161f2bbe63133ea0d40b00d 431 Gene3D G3DSA:1.10.3910.10 1 81 1.1E-15 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily JO41_00985 3840acd20161f2bbe63133ea0d40b00d 431 SUPERFAMILY SSF140683 1 72 7.98E-16 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily JO41_00985 3840acd20161f2bbe63133ea0d40b00d 431 Gene3D G3DSA:3.40.190.10 209 386 1.6E-13 T 14-10-2018 JO41_00595 7603d58b3e1438f0e9a640834ef2f437 321 Gene3D G3DSA:3.90.550.10 63 243 1.6E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00595 7603d58b3e1438f0e9a640834ef2f437 321 SUPERFAMILY SSF53448 73 255 1.46E-10 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 SMART SM01086 312 408 1.6E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 SUPERFAMILY SSF52540 57 399 4.06E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 406 4.0E-184 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 Gene3D G3DSA:3.30.50.30 3 47 9.0E-14 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 SUPERFAMILY SSF57716 10 45 5.13E-8 T 14-10-2018 JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 385 2.4E-14 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 Gene3D G3DSA:3.40.50.300 55 310 9.5E-106 T 14-10-2018 JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 410 49.531 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 Pfam PF06689 ClpX C4-type zinc finger 11 45 4.8E-13 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 Gene3D G3DSA:1.10.8.60 311 414 5.5E-34 T 14-10-2018 JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 SMART SM00382 108 261 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 SMART SM00994 9 48 3.7E-14 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JO41_08425 0230bc7bd593129111b2ba7ae50cbc66 414 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 3.1E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 ProSitePatterns PS00177 DNA topoisomerase II signature. 402 410 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 Gene3D G3DSA:3.40.50.670 376 604 2.2E-59 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR01159 DNA gyrase subunit B signature 288 304 2.6E-5 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR01159 DNA gyrase subunit B signature 336 350 2.6E-5 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR01159 DNA gyrase subunit B signature 7 17 2.6E-5 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 Pfam PF01751 Toprim domain 400 503 9.4E-11 T 14-10-2018 IPR006171 TOPRIM domain JO41_11490 d926aeb6dff581245e239899531c6c8c 604 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 132 7.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 75 88 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 500 512 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 41 56 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 462 478 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 253 266 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 540 556 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 110 124 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 400 414 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 PRINTS PR00418 DNA topoisomerase II family signature 480 497 2.4E-49 T 14-10-2018 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 SUPERFAMILY SSF56719 374 596 1.23E-53 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 SUPERFAMILY SSF54211 223 364 1.46E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_11490 d926aeb6dff581245e239899531c6c8c 604 SMART SM00387 37 173 0.0074 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_11490 d926aeb6dff581245e239899531c6c8c 604 SMART SM00433 41 599 5.6E-163 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 Pfam PF00204 DNA gyrase B 221 364 3.8E-33 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_11490 d926aeb6dff581245e239899531c6c8c 604 Gene3D G3DSA:3.30.565.10 10 210 1.1E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_11490 d926aeb6dff581245e239899531c6c8c 604 Gene3D G3DSA:3.30.230.10 215 368 7.5E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_11490 d926aeb6dff581245e239899531c6c8c 604 SUPERFAMILY SSF55874 7 205 6.95E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_10415 d3ca7a56de8c182df353752ffcd6230c 206 SUPERFAMILY SSF46689 6 75 1.21E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_10415 d3ca7a56de8c182df353752ffcd6230c 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_10415 d3ca7a56de8c182df353752ffcd6230c 206 Gene3D G3DSA:1.10.357.10 5 203 9.9E-24 T 14-10-2018 JO41_10415 d3ca7a56de8c182df353752ffcd6230c 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_10415 d3ca7a56de8c182df353752ffcd6230c 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 Gene3D G3DSA:3.40.50.300 1 169 1.4E-45 T 14-10-2018 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 Pfam PF00149 Calcineurin-like phosphoesterase 182 385 9.0E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 Pfam PF13671 AAA domain 10 138 1.6E-21 T 14-10-2018 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 SUPERFAMILY SSF56091 574 815 8.15E-12 T 14-10-2018 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 SUPERFAMILY SSF52540 5 138 1.8E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 525 846 1.4E-144 T 14-10-2018 IPR032380 Polynucleotide kinase-phosphatase, ligase domain JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 Gene3D G3DSA:3.30.470.30 495 715 6.6E-78 T 14-10-2018 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 850 909 2.2E-30 T 14-10-2018 IPR032390 Polynucleotide kinase-phosphatase, C-terminal JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 Gene3D G3DSA:3.60.21.10 171 429 2.4E-72 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 PRINTS PR00114 Serine/threonine phosphatase family signature 229 256 2.7E-6 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 PRINTS PR00114 Serine/threonine phosphatase family signature 305 331 2.7E-6 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 PRINTS PR00114 Serine/threonine phosphatase family signature 182 209 2.7E-6 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_08715 28e24168b8ffabdc3dbd40931d2ed4a7 909 SUPERFAMILY SSF56300 164 429 2.73E-43 T 14-10-2018 JO41_05970 5bf7cdc51ceb939f0e755f7eada831c6 179 Pfam PF08006 Protein of unknown function (DUF1700) 1 160 1.3E-16 T 14-10-2018 IPR012963 Protein of unknown function DUF1700 JO41_03690 8306002ffc7726402f1474493ef644c7 145 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 42 139 5.9E-35 T 14-10-2018 IPR019287 Holliday junction resolvase-related domain JO41_05525 bb11411bf84d3361ebdc2d611cf0e330 218 SMART SM00849 14 201 2.2E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_05525 bb11411bf84d3361ebdc2d611cf0e330 218 Pfam PF00753 Metallo-beta-lactamase superfamily 13 195 6.6E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_05525 bb11411bf84d3361ebdc2d611cf0e330 218 Gene3D G3DSA:3.60.15.10 3 218 8.0E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_05525 bb11411bf84d3361ebdc2d611cf0e330 218 SUPERFAMILY SSF56281 12 206 4.72E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 297 4.2E-101 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 Hamap MF_01987 Ribokinase [rbsK]. 2 300 25.664 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 SUPERFAMILY SSF53613 1 297 1.09E-84 T 14-10-2018 IPR029056 Ribokinase-like JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 Gene3D G3DSA:3.40.1190.20 1 300 4.7E-102 T 14-10-2018 IPR029056 Ribokinase-like JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 PRINTS PR00990 Ribokinase signature 105 118 2.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 PRINTS PR00990 Ribokinase signature 33 52 2.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 PRINTS PR00990 Ribokinase signature 6 27 2.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 PRINTS PR00990 Ribokinase signature 174 189 2.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 PRINTS PR00990 Ribokinase signature 215 226 2.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JO41_03245 647b46f8ee9ede5cd31f715f93882003 302 Pfam PF00294 pfkB family carbohydrate kinase 1 293 5.0E-68 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 Hamap MF_01151 Protein GrpE [grpE]. 25 237 18.724 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 Gene3D G3DSA:3.90.20.20 61 179 6.8E-29 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 SUPERFAMILY SSF51064 183 236 2.62E-15 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 PRINTS PR00773 GrpE protein signature 189 204 2.4E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 PRINTS PR00773 GrpE protein signature 216 235 2.4E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 PRINTS PR00773 GrpE protein signature 104 120 2.4E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 PRINTS PR00773 GrpE protein signature 132 147 2.4E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 Pfam PF01025 GrpE 75 235 8.7E-48 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 SUPERFAMILY SSF58014 87 178 1.03E-22 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 ProSitePatterns PS01071 grpE protein signature. 192 235 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JO41_07965 58bc5ccdf459ecf8b80c6b3a59518650 244 Gene3D G3DSA:2.30.22.10 181 236 7.7E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Gene3D G3DSA:1.10.10.160 111 185 1.4E-91 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Gene3D G3DSA:3.40.50.300 11 268 1.4E-91 T 14-10-2018 JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Gene3D G3DSA:3.40.50.300 278 378 1.7E-45 T 14-10-2018 JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Gene3D G3DSA:3.40.50.300 650 745 3.6E-42 T 14-10-2018 JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 SUPERFAMILY SSF52540 8 750 7.83E-146 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Pfam PF13361 UvrD-like helicase C-terminal domain 273 724 5.3E-58 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Gene3D G3DSA:1.10.486.10 588 649 3.6E-42 T 14-10-2018 JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 267 1.5E-69 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JO41_09290 a3a02875223a3bd1700ea9c70fcdb966 824 Gene3D G3DSA:1.10.486.10 379 442 1.7E-45 T 14-10-2018 JO41_02430 32aa38649013bab25f9821492ef26d38 274 SUPERFAMILY SSF54862 172 247 1.2E-14 T 14-10-2018 JO41_02430 32aa38649013bab25f9821492ef26d38 274 SUPERFAMILY SSF52218 6 158 4.46E-17 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_02430 32aa38649013bab25f9821492ef26d38 274 Pfam PF12724 Flavodoxin domain 10 96 2.2E-6 T 14-10-2018 IPR026816 Flavodoxin domain JO41_02430 32aa38649013bab25f9821492ef26d38 274 Gene3D G3DSA:3.30.70.20 199 272 3.5E-6 T 14-10-2018 JO41_02430 32aa38649013bab25f9821492ef26d38 274 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 204 215 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_02430 32aa38649013bab25f9821492ef26d38 274 Gene3D G3DSA:3.40.50.360 7 166 4.7E-14 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_02430 32aa38649013bab25f9821492ef26d38 274 Pfam PF00037 4Fe-4S binding domain 198 219 5.6E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_10065 078d263fcdea2811b4e685849cd72798 586 Pfam PF03129 Anticodon binding domain 487 574 4.6E-21 T 14-10-2018 IPR004154 Anticodon-binding JO41_10065 078d263fcdea2811b4e685849cd72798 586 Gene3D G3DSA:3.40.50.800 478 584 4.2E-30 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO41_10065 078d263fcdea2811b4e685849cd72798 586 PRINTS PR01047 Threonyl-tRNA synthetase signature 453 466 1.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO41_10065 078d263fcdea2811b4e685849cd72798 586 PRINTS PR01047 Threonyl-tRNA synthetase signature 271 299 1.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO41_10065 078d263fcdea2811b4e685849cd72798 586 PRINTS PR01047 Threonyl-tRNA synthetase signature 480 492 1.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO41_10065 078d263fcdea2811b4e685849cd72798 586 PRINTS PR01047 Threonyl-tRNA synthetase signature 408 436 1.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO41_10065 078d263fcdea2811b4e685849cd72798 586 PRINTS PR01047 Threonyl-tRNA synthetase signature 304 327 1.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO41_10065 078d263fcdea2811b4e685849cd72798 586 Gene3D G3DSA:3.30.54.20 73 127 2.9E-63 T 14-10-2018 JO41_10065 078d263fcdea2811b4e685849cd72798 586 SUPERFAMILY SSF52954 476 579 3.17E-29 T 14-10-2018 JO41_10065 078d263fcdea2811b4e685849cd72798 586 SUPERFAMILY SSF55186 9 183 2.49E-54 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JO41_10065 078d263fcdea2811b4e685849cd72798 586 Gene3D G3DSA:3.30.980.10 13 164 2.9E-63 T 14-10-2018 JO41_10065 078d263fcdea2811b4e685849cd72798 586 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 110 161 5.1E-12 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO41_10065 078d263fcdea2811b4e685849cd72798 586 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 9 579 33.403 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO41_10065 078d263fcdea2811b4e685849cd72798 586 SUPERFAMILY SSF55681 185 472 3.19E-91 T 14-10-2018 JO41_10065 078d263fcdea2811b4e685849cd72798 586 SMART SM00863 110 161 1.2E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JO41_10065 078d263fcdea2811b4e685849cd72798 586 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 15 574 1.9E-208 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JO41_10065 078d263fcdea2811b4e685849cd72798 586 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 264 474 3.6E-42 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_10065 078d263fcdea2811b4e685849cd72798 586 Gene3D G3DSA:3.30.930.10 165 477 2.4E-121 T 14-10-2018 JO41_09880 c5b5526f0272ba6e54c26eb4eb1d7d84 380 PIRSF PIRSF015658 1 379 3.6E-170 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 JO41_09880 c5b5526f0272ba6e54c26eb4eb1d7d84 380 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 22 377 1.3E-159 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 JO41_09880 c5b5526f0272ba6e54c26eb4eb1d7d84 380 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 23 372 2.0E-150 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 Gene3D G3DSA:3.40.50.300 1 252 2.6E-61 T 14-10-2018 JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 SMART SM00382 340 525 2.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 SMART SM00382 29 219 5.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 Pfam PF00005 ABC transporter 22 170 6.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 Pfam PF00005 ABC transporter 335 478 7.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 SUPERFAMILY SSF52540 2 232 7.99E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 SUPERFAMILY SSF52540 303 536 1.2E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10430 9e27974cade8ec3d6c9324612d66fc7e 548 Gene3D G3DSA:3.40.50.300 311 546 3.1E-50 T 14-10-2018 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 133 216 2.1E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 366 3.0E-106 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 Gene3D G3DSA:3.40.50.720 1 137 2.6E-32 T 14-10-2018 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 119 4.5E-23 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 369 40.526 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 Gene3D G3DSA:1.10.1740.10 289 373 4.5E-23 T 14-10-2018 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 SUPERFAMILY SSF51735 2 137 4.77E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 SUPERFAMILY SSF55347 113 251 1.63E-53 T 14-10-2018 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 Pfam PF13288 DXP reductoisomerase C-terminal domain 248 364 2.6E-33 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 PIRSF PIRSF006205 1 375 7.2E-128 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO41_11220 b5cf95e31cd083311490c1ce0fefed3a 382 SUPERFAMILY SSF69055 281 370 1.1E-23 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JO41_09845 53f6082cc169ee740853a71333069e3b 365 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 225 356 4.3E-59 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JO41_09845 53f6082cc169ee740853a71333069e3b 365 SUPERFAMILY SSF51316 224 362 8.89E-57 T 14-10-2018 IPR011057 Mss4-like superfamily JO41_09845 53f6082cc169ee740853a71333069e3b 365 SUPERFAMILY SSF55068 46 208 2.49E-62 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO41_09845 53f6082cc169ee740853a71333069e3b 365 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 221 348 35.47 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JO41_09845 53f6082cc169ee740853a71333069e3b 365 Pfam PF01625 Peptide methionine sulfoxide reductase 56 204 3.2E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO41_09845 53f6082cc169ee740853a71333069e3b 365 Gene3D G3DSA:2.170.150.20 217 365 1.4E-58 T 14-10-2018 JO41_09845 53f6082cc169ee740853a71333069e3b 365 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 55 203 3.3E-50 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO41_09845 53f6082cc169ee740853a71333069e3b 365 Pfam PF01641 SelR domain 228 347 1.6E-49 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JO41_09845 53f6082cc169ee740853a71333069e3b 365 Gene3D G3DSA:3.30.1060.10 20 215 8.1E-61 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO41_09845 53f6082cc169ee740853a71333069e3b 365 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 54 209 35.217 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Pfam PF13176 Tetratricopeptide repeat 279 308 7.8E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SUPERFAMILY SSF48452 279 373 5.12E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Pfam PF00515 Tetratricopeptide repeat 209 241 2.2E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Pfam PF13181 Tetratricopeptide repeat 142 171 0.071 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Gene3D G3DSA:1.25.40.10 210 314 2.6E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 172 205 0.0026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 208 241 7.3E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 138 171 0.62 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 276 309 0.015 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 36 69 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 242 275 0.33 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 310 342 37.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 104 137 6.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 70 103 0.12 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SMART SM00028 343 376 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Gene3D G3DSA:1.25.40.10 29 136 7.7E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Gene3D G3DSA:1.25.40.10 137 209 5.4E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Pfam PF14559 Tetratricopeptide repeat 322 368 1.5E-9 T 14-10-2018 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Pfam PF14559 Tetratricopeptide repeat 83 136 3.0E-7 T 14-10-2018 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 Gene3D G3DSA:1.25.40.10 315 387 1.3E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_08765 60ecc35f2c104d3ceb9517ef8af38872 388 SUPERFAMILY SSF81901 72 308 5.49E-36 T 14-10-2018 JO41_11240 71951023b231b63836c7bb297562ac57 209 Gene3D G3DSA:1.10.357.10 6 205 9.0E-22 T 14-10-2018 JO41_11240 71951023b231b63836c7bb297562ac57 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_11240 71951023b231b63836c7bb297562ac57 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_11240 71951023b231b63836c7bb297562ac57 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_11240 71951023b231b63836c7bb297562ac57 209 SUPERFAMILY SSF46689 4 69 3.59E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_11240 71951023b231b63836c7bb297562ac57 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 Gene3D G3DSA:3.40.50.20 1 125 1.1E-32 T 14-10-2018 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 Gene3D G3DSA:3.30.470.20 126 355 2.2E-76 T 14-10-2018 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 Gene3D G3DSA:3.30.1490.20 151 225 2.2E-76 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 Pfam PF01820 D-ala D-ala ligase N-terminus 2 125 1.5E-28 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 352 3.6E-100 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 PIRSF PIRSF039102 1 361 2.8E-120 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 103 114 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 SUPERFAMILY SSF56059 136 355 1.24E-54 T 14-10-2018 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 SUPERFAMILY SSF52440 1 135 1.63E-33 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 353 39.062 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 Pfam PF07478 D-ala D-ala ligase C-terminus 143 348 5.6E-70 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_03225 3e3d1da163dc6d4ed8a494d5aacad664 367 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 294 323 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_08015 10830c9d992b56d376c12c65940808fd 411 Pfam PF00375 Sodium:dicarboxylate symporter family 4 396 5.4E-30 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JO41_08015 10830c9d992b56d376c12c65940808fd 411 Gene3D G3DSA:1.10.3860.10 1 407 4.2E-31 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_08015 10830c9d992b56d376c12c65940808fd 411 SUPERFAMILY SSF118215 4 396 5.36E-35 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_11355 8339eba4cba20ee9d96fc20acbd688f4 498 Gene3D G3DSA:3.40.50.720 9 133 1.9E-27 T 14-10-2018 JO41_11355 8339eba4cba20ee9d96fc20acbd688f4 498 SUPERFAMILY SSF51735 11 138 2.91E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_11355 8339eba4cba20ee9d96fc20acbd688f4 498 Pfam PF02719 Polysaccharide biosynthesis protein 152 446 9.6E-109 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JO41_11355 8339eba4cba20ee9d96fc20acbd688f4 498 Gene3D G3DSA:3.40.50.720 147 461 4.1E-102 T 14-10-2018 JO41_11355 8339eba4cba20ee9d96fc20acbd688f4 498 SUPERFAMILY SSF51735 149 423 2.28E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 SUPERFAMILY SSF53067 3 254 3.4E-98 T 14-10-2018 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 Gene3D G3DSA:3.30.420.40 1 252 3.4E-110 T 14-10-2018 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 60.524 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 PIRSF PIRSF000538 2 497 5.8E-183 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 1.5E-85 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 495 3.6E-230 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 4.0E-64 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 Gene3D G3DSA:3.30.420.40 253 497 2.5E-93 T 14-10-2018 JO41_08615 a4ec9ce3b0315d692e0e0a82af3b4559 497 SUPERFAMILY SSF53067 254 495 8.51E-89 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Gene3D G3DSA:3.30.1490.110 82 169 2.2E-101 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 SUPERFAMILY SSF53067 199 377 4.48E-36 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Pfam PF14450 Cell division protein FtsA 207 375 2.8E-20 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Gene3D G3DSA:3.30.420.40 8 372 2.2E-101 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 SMART SM00842 5 196 1.6E-77 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Gene3D G3DSA:3.90.640.10 235 300 2.2E-101 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Pfam PF02491 SHS2 domain inserted in FTSA 80 162 2.4E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 413 27.282 T 14-10-2018 IPR020823 Cell division protein FtsA JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 SUPERFAMILY SSF53067 3 196 1.01E-48 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Gene3D G3DSA:3.30.420.40 197 353 2.2E-101 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 PIRSF PIRSF003101 1 413 2.4E-129 T 14-10-2018 IPR020823 Cell division protein FtsA JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 Pfam PF14450 Cell division protein FtsA 6 185 3.5E-9 T 14-10-2018 JO41_01180 28f2fa0f96c13fdc5e917f0a32e2f30f 413 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 4 378 5.5E-129 T 14-10-2018 IPR020823 Cell division protein FtsA JO41_09080 4976d0cb34bd90c1a43dcf018bb768fa 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 351 1.6E-66 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 JO41_07590 212297ee01e90dac027fa87a4abaa059 293 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 170 3.0E-36 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 JO41_07590 212297ee01e90dac027fa87a4abaa059 293 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 286 6.2E-22 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal JO41_07590 212297ee01e90dac027fa87a4abaa059 293 Gene3D G3DSA:3.30.465.10 4 175 2.2E-41 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO41_07590 212297ee01e90dac027fa87a4abaa059 293 Gene3D G3DSA:3.30.390.50 178 290 4.4E-20 T 14-10-2018 JO41_07590 212297ee01e90dac027fa87a4abaa059 293 SMART SM01092 181 287 1.2E-14 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal JO41_07590 212297ee01e90dac027fa87a4abaa059 293 SUPERFAMILY SSF55447 183 290 1.44E-22 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily JO41_07590 212297ee01e90dac027fa87a4abaa059 293 SUPERFAMILY SSF56176 6 172 1.31E-40 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_02735 fad2fa379841c01896b2a5dce52111ac 625 Pfam PF07196 Flagellin hook IN motif 376 425 5.4E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JO41_02735 fad2fa379841c01896b2a5dce52111ac 625 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 343 6.4E-80 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO41_02735 fad2fa379841c01896b2a5dce52111ac 625 PRINTS PR01005 Flagellar hook-associated protein signature 133 153 9.6E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO41_02735 fad2fa379841c01896b2a5dce52111ac 625 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 9.6E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO41_02735 fad2fa379841c01896b2a5dce52111ac 625 PRINTS PR01005 Flagellar hook-associated protein signature 166 190 9.6E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JO41_02735 fad2fa379841c01896b2a5dce52111ac 625 SUPERFAMILY SSF64518 146 623 3.14E-19 T 14-10-2018 JO41_02735 fad2fa379841c01896b2a5dce52111ac 625 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 571 621 2.6E-10 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 SUPERFAMILY SSF52518 293 476 4.0E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 617 1.4E-208 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 Gene3D G3DSA:3.40.50.970 313 484 2.3E-67 T 14-10-2018 JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 Pfam PF02779 Transketolase, pyrimidine binding domain 317 476 1.3E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 Gene3D G3DSA:3.40.50.920 491 622 7.5E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 281 1.1E-109 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 SMART SM00861 316 479 8.3E-60 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 SUPERFAMILY SSF52922 493 621 8.51E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 Pfam PF02780 Transketolase, C-terminal domain 497 613 1.8E-19 T 14-10-2018 IPR033248 Transketolase, C-terminal domain JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 SUPERFAMILY SSF52518 8 347 4.76E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO41_07755 6905e9d2183b1af4c56f5d707b97c3e9 623 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 623 41.303 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO41_01360 50eb57ff2c2401905358f348808f31a4 479 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 355 6.4E-77 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_01360 50eb57ff2c2401905358f348808f31a4 479 SMART SM00382 158 339 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01360 50eb57ff2c2401905358f348808f31a4 479 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 4 435 6.1E-193 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_01360 50eb57ff2c2401905358f348808f31a4 479 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 89 1.3E-8 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_01360 50eb57ff2c2401905358f348808f31a4 479 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_01360 50eb57ff2c2401905358f348808f31a4 479 SUPERFAMILY SSF52540 93 360 2.72E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01360 50eb57ff2c2401905358f348808f31a4 479 Gene3D G3DSA:3.40.50.12240 13 437 1.5E-154 T 14-10-2018 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 Gene3D G3DSA:1.10.8.10 1 55 1.3E-21 T 14-10-2018 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 Gene3D G3DSA:3.30.479.20 142 277 1.7E-38 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 SUPERFAMILY SSF54713 56 134 5.89E-15 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 SUPERFAMILY SSF54713 141 277 3.92E-32 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 Hamap MF_00050 Elongation factor Ts [tsf]. 1 278 50.417 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 Pfam PF00889 Elongation factor TS 70 277 7.4E-51 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 SUPERFAMILY SSF46934 1 55 3.37E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 Gene3D G3DSA:3.30.479.20 56 137 1.9E-17 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 Gene3D G3DSA:1.10.286.20 192 236 1.7E-38 T 14-10-2018 JO41_11200 b86ca189564c336aed4a1f9cb7579fca 278 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 277 1.1E-70 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 Gene3D G3DSA:3.40.50.720 97 286 2.4E-115 T 14-10-2018 JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 SUPERFAMILY SSF52283 4 136 5.1E-30 T 14-10-2018 JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 Gene3D G3DSA:3.40.50.720 15 316 2.4E-115 T 14-10-2018 JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 317 2.4E-29 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 SUPERFAMILY SSF51735 98 288 2.36E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JO41_10870 baf2f6325df4e27fa6da19a19970e22d 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.0E-55 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 Gene3D G3DSA:3.40.50.300 124 314 1.3E-66 T 14-10-2018 JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 SMART SM00490 425 522 1.1E-8 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 SUPERFAMILY SSF52540 151 533 1.1E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 TIGRFAM TIGR00595 priA: primosomal protein N' 156 662 1.7E-190 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 Gene3D G3DSA:1.10.8.630 4 118 3.7E-21 T 14-10-2018 JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 Pfam PF00271 Helicase conserved C-terminal domain 435 521 2.8E-9 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 SMART SM00487 131 327 2.2E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 Pfam PF00270 DEAD/DEAH box helicase 144 295 4.1E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_00350 adcfe323fce7e0f2dd41573a4f69107e 665 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 664 23.9 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 Gene3D G3DSA:3.30.1340.10 1 88 2.3E-30 T 14-10-2018 IPR035895 HPr-like superfamily JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.2E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.2E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.2E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.5E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 5.2E-30 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JO41_03375 2852a9a68cb83e1de380d97461e227bc 88 SUPERFAMILY SSF55594 3 87 4.19E-27 T 14-10-2018 IPR035895 HPr-like superfamily JO41_10000 4328b99a7aca96ab0b5410680bac1554 116 Pfam PF01588 Putative tRNA binding domain 19 113 4.3E-31 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JO41_10000 4328b99a7aca96ab0b5410680bac1554 116 SUPERFAMILY SSF50249 12 115 3.43E-35 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_10000 4328b99a7aca96ab0b5410680bac1554 116 Gene3D G3DSA:2.40.50.140 5 116 2.3E-39 T 14-10-2018 JO41_10000 4328b99a7aca96ab0b5410680bac1554 116 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 3 115 9.6E-37 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 Gene3D G3DSA:2.60.40.1080 732 816 2.1E-5 T 14-10-2018 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 Gene3D G3DSA:2.60.40.1080 1385 1474 5.5E-7 T 14-10-2018 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 Gene3D G3DSA:2.60.40.1080 1288 1382 1.4E-6 T 14-10-2018 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 Gene3D G3DSA:2.60.40.1080 918 1003 9.6E-6 T 14-10-2018 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 825 907 0.52 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 919 998 0.18 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 129 224 17.0 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 1286 1378 0.35 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 730 810 13.0 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 530 614 3.3 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 1473 1552 2.4 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_02195 3c64054b48e6ad661d43c2abde139f80 1936 SMART SM00635 1195 1274 6.7 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 JO41_12175 32731e0b477b3da43d15bee7056824a4 456 Gene3D G3DSA:3.40.50.1100 106 428 5.8E-28 T 14-10-2018 JO41_12175 32731e0b477b3da43d15bee7056824a4 456 Gene3D G3DSA:3.90.1380.10 18 87 3.8E-7 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily JO41_12175 32731e0b477b3da43d15bee7056824a4 456 Pfam PF14821 Threonine synthase N terminus 28 83 3.2E-8 T 14-10-2018 IPR029144 Threonine synthase, N-terminal JO41_12175 32731e0b477b3da43d15bee7056824a4 456 Gene3D G3DSA:3.40.50.1100 88 422 5.8E-28 T 14-10-2018 JO41_12175 32731e0b477b3da43d15bee7056824a4 456 SUPERFAMILY SSF53686 25 369 3.53E-33 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JO41_11455 ce61a3d701d2757e57c8e47ae0d175c7 259 Gene3D G3DSA:2.50.20.10 32 259 2.0E-37 T 14-10-2018 JO41_11455 ce61a3d701d2757e57c8e47ae0d175c7 259 Pfam PF17131 Outer membrane lipoprotein-sorting protein 81 257 8.1E-33 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 Pfam PF07687 Peptidase dimerisation domain 210 286 7.5E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 Gene3D G3DSA:3.40.630.10 1 284 3.1E-57 T 14-10-2018 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 Pfam PF01546 Peptidase family M20/M25/M40 71 477 4.6E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 359 377 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 79 98 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 134 151 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 158 176 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 446 468 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 203 220 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 100 118 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 248 267 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PRINTS PR00934 X-His dipeptidase (M25) signature 424 440 3.8E-54 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 PIRSF PIRSF016599 1 479 3.9E-183 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 SUPERFAMILY SSF53187 9 478 2.12E-57 T 14-10-2018 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 Gene3D G3DSA:3.40.630.10 360 479 2.8E-24 T 14-10-2018 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 7 478 6.9E-176 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JO41_03900 c1f394b45281d81e3fce28270a01a7a2 479 SUPERFAMILY SSF55031 235 387 5.65E-8 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO41_01400 7c39e6f5e33e897574e4f8a265cbd31c 78 SUPERFAMILY SSF47336 1 76 1.83E-21 T 14-10-2018 IPR036736 ACP-like superfamily JO41_01400 7c39e6f5e33e897574e4f8a265cbd31c 78 Gene3D G3DSA:1.10.1200.10 1 78 2.3E-25 T 14-10-2018 IPR036736 ACP-like superfamily JO41_01400 7c39e6f5e33e897574e4f8a265cbd31c 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 19.115 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JO41_01400 7c39e6f5e33e897574e4f8a265cbd31c 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 1.1E-27 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JO41_01400 7c39e6f5e33e897574e4f8a265cbd31c 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 76 4.0E-15 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JO41_01400 7c39e6f5e33e897574e4f8a265cbd31c 78 Pfam PF00550 Phosphopantetheine attachment site 7 73 4.9E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JO41_11990 c9c02b096787fb56517c78657178830f 213 Gene3D G3DSA:3.60.15.10 2 213 1.8E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_11990 c9c02b096787fb56517c78657178830f 213 Pfam PF00753 Metallo-beta-lactamase superfamily 8 184 9.7E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_11990 c9c02b096787fb56517c78657178830f 213 SUPERFAMILY SSF56281 8 208 3.66E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_11990 c9c02b096787fb56517c78657178830f 213 SMART SM00849 6 203 4.3E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_09005 cc9ae5819b8b2f41177e85d6fd392cd4 196 Pfam PF01467 Cytidylyltransferase-like 6 170 2.1E-23 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO41_09005 cc9ae5819b8b2f41177e85d6fd392cd4 196 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 195 1.8E-50 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JO41_09005 cc9ae5819b8b2f41177e85d6fd392cd4 196 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 67 2.6E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO41_09005 cc9ae5819b8b2f41177e85d6fd392cd4 196 Gene3D G3DSA:3.40.50.620 1 196 1.5E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_09005 cc9ae5819b8b2f41177e85d6fd392cd4 196 SUPERFAMILY SSF52374 1 195 3.1E-45 T 14-10-2018 JO41_09005 cc9ae5819b8b2f41177e85d6fd392cd4 196 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 196 27.571 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 159 177 2.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 72 85 2.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 289 298 2.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 365 381 2.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 466 480 2.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 SMART SM00493 1 98 4.2E-25 T 14-10-2018 IPR006171 TOPRIM domain JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Pfam PF01751 Toprim domain 1 110 8.7E-28 T 14-10-2018 IPR006171 TOPRIM domain JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Gene3D G3DSA:3.40.50.140 1 131 1.6E-46 T 14-10-2018 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Gene3D G3DSA:2.70.20.10 181 450 2.7E-151 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 1 605 2.4E-244 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 635 51.173 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 613 648 4.2E-8 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 652 684 3.8E-6 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 572 606 4.1E-12 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Pfam PF01131 DNA topoisomerase 125 540 2.9E-123 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 SUPERFAMILY SSF57783 569 606 2.38E-11 T 14-10-2018 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 SMART SM00436 101 189 2.4E-51 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 SUPERFAMILY SSF56712 1 582 9.94E-182 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Gene3D G3DSA:1.10.290.10 247 380 2.7E-151 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Gene3D G3DSA:3.30.65.10 564 612 4.7E-12 T 14-10-2018 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 SMART SM00437 239 503 2.6E-108 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 Gene3D G3DSA:1.10.460.10 132 543 2.7E-151 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JO41_09625 e1506d97c0c1b507d8c68bfc70330046 695 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 276 298 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 JO41_00990 27e441490d5ad1298c40ba3163b34942 216 Pfam PF00027 Cyclic nucleotide-binding domain 26 107 8.6E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_00990 27e441490d5ad1298c40ba3163b34942 216 SUPERFAMILY SSF51206 2 139 1.83E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_00990 27e441490d5ad1298c40ba3163b34942 216 SUPERFAMILY SSF46785 147 215 9.07E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_00990 27e441490d5ad1298c40ba3163b34942 216 SMART SM00100 4 125 2.7E-5 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_00990 27e441490d5ad1298c40ba3163b34942 216 Pfam PF13545 Crp-like helix-turn-helix domain 150 215 4.0E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JO41_00990 27e441490d5ad1298c40ba3163b34942 216 Gene3D G3DSA:2.60.120.1460 1 212 2.6E-52 T 14-10-2018 JO41_00760 917560ad7456714ad936d7577176ab55 459 Gene3D G3DSA:1.20.1250.20 231 451 3.5E-7 T 14-10-2018 JO41_00760 917560ad7456714ad936d7577176ab55 459 Gene3D G3DSA:1.20.1250.20 10 216 1.2E-20 T 14-10-2018 JO41_00760 917560ad7456714ad936d7577176ab55 459 Pfam PF07690 Major Facilitator Superfamily 47 327 1.6E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JO41_00760 917560ad7456714ad936d7577176ab55 459 SUPERFAMILY SSF103473 11 447 2.22E-36 T 14-10-2018 IPR036259 MFS transporter superfamily JO41_05120 d4dd8fbd84dfe54b5913936ac7e3caf2 396 Pfam PF01170 Putative RNA methylase family UPF0020 167 390 1.6E-35 T 14-10-2018 IPR000241 Putative RNA methylase domain JO41_05120 d4dd8fbd84dfe54b5913936ac7e3caf2 396 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 322 328 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_05120 d4dd8fbd84dfe54b5913936ac7e3caf2 396 SUPERFAMILY SSF53335 149 367 7.96E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_05120 d4dd8fbd84dfe54b5913936ac7e3caf2 396 Gene3D G3DSA:3.40.50.150 165 389 2.1E-93 T 14-10-2018 JO41_05120 d4dd8fbd84dfe54b5913936ac7e3caf2 396 Gene3D G3DSA:3.30.2130.30 6 250 2.1E-93 T 14-10-2018 JO41_08930 6f2a55005784283dbc97d42f343dc9a1 333 Pfam PF03793 PASTA domain 115 184 1.4E-8 T 14-10-2018 IPR005543 PASTA domain JO41_08930 6f2a55005784283dbc97d42f343dc9a1 333 Pfam PF03793 PASTA domain 46 109 6.8E-10 T 14-10-2018 IPR005543 PASTA domain JO41_08930 6f2a55005784283dbc97d42f343dc9a1 333 Gene3D G3DSA:3.30.10.20 115 186 4.6E-8 T 14-10-2018 JO41_08930 6f2a55005784283dbc97d42f343dc9a1 333 SMART SM00740 187 252 2.1 T 14-10-2018 IPR005543 PASTA domain JO41_08930 6f2a55005784283dbc97d42f343dc9a1 333 SMART SM00740 110 184 0.052 T 14-10-2018 IPR005543 PASTA domain JO41_08930 6f2a55005784283dbc97d42f343dc9a1 333 SMART SM00740 42 109 1.2E-9 T 14-10-2018 IPR005543 PASTA domain JO41_08930 6f2a55005784283dbc97d42f343dc9a1 333 Gene3D G3DSA:3.30.10.20 42 111 6.1E-12 T 14-10-2018 JO41_07760 c6b113cde4feb6f55e1621ce8d49d3c1 127 SUPERFAMILY SSF54593 1 116 2.69E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO41_07760 c6b113cde4feb6f55e1621ce8d49d3c1 127 Gene3D G3DSA:3.10.180.10 1 127 5.9E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JO41_07760 c6b113cde4feb6f55e1621ce8d49d3c1 127 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 109 1.1E-12 T 14-10-2018 JO41_01530 2dd751db3e0edac6369add19849bbc8d 268 SUPERFAMILY SSF100950 1 260 1.0E-103 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_01530 2dd751db3e0edac6369add19849bbc8d 268 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 3.5E-124 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JO41_01530 2dd751db3e0edac6369add19849bbc8d 268 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JO41_01530 2dd751db3e0edac6369add19849bbc8d 268 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 39.843 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JO41_01530 2dd751db3e0edac6369add19849bbc8d 268 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 222 1.2E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 JO41_01530 2dd751db3e0edac6369add19849bbc8d 268 Gene3D G3DSA:3.40.50.1360 1 264 2.1E-113 T 14-10-2018 JO41_03285 81d6f1a19215ac36b58fd86e12a55037 418 Gene3D G3DSA:3.90.1150.140 255 403 7.2E-138 T 14-10-2018 JO41_03285 81d6f1a19215ac36b58fd86e12a55037 418 Gene3D G3DSA:3.40.50.12170 47 418 7.2E-138 T 14-10-2018 JO41_03285 81d6f1a19215ac36b58fd86e12a55037 418 PIRSF PIRSF016719 9 418 4.0E-149 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JO41_03285 81d6f1a19215ac36b58fd86e12a55037 418 Pfam PF07075 Protein of unknown function (DUF1343) 63 418 2.2E-135 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 SUPERFAMILY SSF47741 70 153 1.2E-25 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 SMART SM01008 177 285 1.1E-36 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 Gene3D G3DSA:3.30.365.10 148 865 4.1E-180 T 14-10-2018 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 TIGRFAM TIGR03311 Se_dep_XDH: selenium-dependent xanthine dehydrogenase 3 869 0.0 T 14-10-2018 IPR017697 Selenium-dependent xanthine dehydrogenase JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 36 44 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 178 284 8.2E-22 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 SUPERFAMILY SSF54292 6 75 1.84E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 Pfam PF01799 [2Fe-2S] binding domain 70 141 1.0E-22 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 SUPERFAMILY SSF56003 289 862 8.24E-145 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 Gene3D G3DSA:1.10.150.120 75 147 2.6E-24 T 14-10-2018 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 304 794 2.4E-114 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 Gene3D G3DSA:3.10.20.30 1 73 3.3E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 50 1.8E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JO41_05030 ce0d561b802c78d779f3ae6d8f0939f9 871 SUPERFAMILY SSF54665 133 286 6.28E-37 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 Pfam PF00581 Rhodanese-like domain 57 136 1.3E-11 T 14-10-2018 IPR001763 Rhodanese-like domain JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 Pfam PF00581 Rhodanese-like domain 154 235 1.3E-9 T 14-10-2018 IPR001763 Rhodanese-like domain JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 Gene3D G3DSA:3.40.250.10 52 147 8.2E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 SMART SM00450 50 146 2.9E-16 T 14-10-2018 IPR001763 Rhodanese-like domain JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 SMART SM00450 151 245 3.8E-15 T 14-10-2018 IPR001763 Rhodanese-like domain JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 Gene3D G3DSA:3.40.250.10 148 243 3.4E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 SUPERFAMILY SSF52821 147 241 6.68E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO41_05255 eba89e147f01ab8aed04cccbfc36fc8d 246 SUPERFAMILY SSF52821 54 136 3.01E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO41_11550 e2d69c6b74d929bbff29278261704a9a 221 Gene3D G3DSA:3.40.50.300 1 220 1.6E-56 T 14-10-2018 JO41_11550 e2d69c6b74d929bbff29278261704a9a 221 Pfam PF00005 ABC transporter 23 170 8.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11550 e2d69c6b74d929bbff29278261704a9a 221 SUPERFAMILY SSF52540 2 218 1.42E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11550 e2d69c6b74d929bbff29278261704a9a 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11550 e2d69c6b74d929bbff29278261704a9a 221 SMART SM00382 31 219 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_06140 f84f5e1fd9e0b9b4fcec1707418a40c5 137 SUPERFAMILY SSF88723 5 119 4.49E-7 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_06140 f84f5e1fd9e0b9b4fcec1707418a40c5 137 Pfam PF13470 PIN domain 6 115 8.5E-12 T 14-10-2018 IPR002716 PIN domain JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Gene3D G3DSA:3.30.1480.10 3 121 1.9E-19 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 454 25.694 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Pfam PF08529 NusA N-terminal domain 9 122 2.8E-17 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Pfam PF13184 NusA-like KH domain 229 296 8.1E-29 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Gene3D G3DSA:2.40.50.140 133 197 6.1E-17 T 14-10-2018 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Pfam PF00575 S1 RNA binding domain 130 188 7.0E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Gene3D G3DSA:3.30.300.20 198 276 4.9E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 SMART SM00316 131 199 8.4E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 SUPERFAMILY SSF50249 130 198 3.24E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Pfam PF13248 zinc-ribbon domain 455 477 1.2E-8 T 14-10-2018 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 SUPERFAMILY SSF69705 9 124 4.32E-23 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 SUPERFAMILY SSF47794 364 420 9.73E-8 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 343 8.2E-119 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 SUPERFAMILY SSF54814 199 276 7.85E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 SUPERFAMILY SSF54814 278 341 2.29E-14 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO41_09035 c58ec4081d3360b6ff6505778ceaa4e9 486 Gene3D G3DSA:3.30.300.20 278 445 4.5E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO41_09485 d164f99f34734887b60ec9b1aa3c1fe7 90 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-27 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO41_09485 d164f99f34734887b60ec9b1aa3c1fe7 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.4E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO41_09485 d164f99f34734887b60ec9b1aa3c1fe7 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.4E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO41_09485 d164f99f34734887b60ec9b1aa3c1fe7 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.4E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO41_09485 d164f99f34734887b60ec9b1aa3c1fe7 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.8E-31 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 JO41_09485 d164f99f34734887b60ec9b1aa3c1fe7 90 PIRSF PIRSF004669 1 89 1.1E-29 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SMART SM01058 505 602 1.2E-43 T 14-10-2018 IPR003711 CarD-like/TRCF domain JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SMART SM00487 626 816 5.0E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Gene3D G3DSA:3.30.2060.10 158 247 2.2E-49 T 14-10-2018 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Pfam PF02559 CarD-like/TRCF domain 506 601 2.1E-27 T 14-10-2018 IPR003711 CarD-like/TRCF domain JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SUPERFAMILY SSF52540 23 385 3.89E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Gene3D G3DSA:2.30.30.840 509 567 4.2E-237 T 14-10-2018 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SMART SM00490 852 936 5.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Pfam PF03461 TRCF domain 1032 1123 2.0E-26 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Gene3D G3DSA:3.40.50.300 568 807 4.2E-237 T 14-10-2018 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SUPERFAMILY SSF52540 404 488 2.15E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 54 1130 27.004 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Gene3D G3DSA:3.40.50.11180 46 347 2.2E-49 T 14-10-2018 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SUPERFAMILY SSF52540 808 1016 6.15E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 175 1103 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Gene3D G3DSA:3.90.1150.50 1025 1169 2.7E-34 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Gene3D G3DSA:3.40.50.300 505 1015 4.2E-237 T 14-10-2018 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SUPERFAMILY SSF141259 499 572 2.09E-20 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SUPERFAMILY SSF143517 1016 1168 5.89E-32 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Pfam PF00271 Helicase conserved C-terminal domain 833 935 1.6E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SUPERFAMILY SSF52540 550 809 1.89E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 SMART SM00982 1029 1129 3.7E-35 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JO41_06545 1dca435abee6486dcb3d849f3bee86af 1169 Pfam PF00270 DEAD/DEAH box helicase 652 790 1.6E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 SUPERFAMILY SSF52096 16 198 9.62E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 117 130 - T 14-10-2018 IPR033135 ClpP, histidine active site JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 Gene3D G3DSA:3.90.226.10 1 201 1.4E-83 T 14-10-2018 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 Pfam PF00574 Clp protease 18 197 1.5E-83 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 7 196 9.0E-97 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 95 106 - T 14-10-2018 IPR018215 ClpP, Ser active site JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 PRINTS PR00127 Clp protease catalytic subunit P signature 173 192 3.5E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 PRINTS PR00127 Clp protease catalytic subunit P signature 24 39 3.5E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 PRINTS PR00127 Clp protease catalytic subunit P signature 95 112 3.5E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 PRINTS PR00127 Clp protease catalytic subunit P signature 116 135 3.5E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 PRINTS PR00127 Clp protease catalytic subunit P signature 64 84 3.5E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08420 fba4177410d1b0e2b3263e24a62b2b38 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 198 41.952 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 266 554 5.2E-93 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 132 1.4E-18 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 SUPERFAMILY SSF51621 266 562 1.18E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 576 8.2E-138 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 300 319 2.1E-17 T 14-10-2018 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 486 2.1E-17 T 14-10-2018 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 454 469 2.1E-17 T 14-10-2018 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 162 234 6.1E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 SUPERFAMILY SSF52009 131 253 4.06E-21 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 PIRSF PIRSF000732 1 584 4.4E-178 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 Gene3D G3DSA:1.10.274.10 23 155 4.5E-51 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 SUPERFAMILY SSF47831 31 147 1.12E-19 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 Gene3D G3DSA:3.50.30.10 6 244 4.5E-51 T 14-10-2018 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 454 472 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JO41_07050 57d2b98ce18d06da6335336f1c651c35 585 Gene3D G3DSA:3.20.20.60 245 583 2.1E-101 T 14-10-2018 JO41_09775 bf458f2c9b489f29baf92a9d929b3698 546 SUPERFAMILY SSF140683 477 545 7.32E-5 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily JO41_09775 bf458f2c9b489f29baf92a9d929b3698 546 Pfam PF01814 Hemerythrin HHE cation binding domain 98 212 1.9E-6 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JO41_09775 bf458f2c9b489f29baf92a9d929b3698 546 SUPERFAMILY SSF55785 303 406 2.27E-7 T 14-10-2018 IPR035965 PAS domain superfamily JO41_09775 bf458f2c9b489f29baf92a9d929b3698 546 Gene3D G3DSA:1.20.120.520 86 320 3.5E-35 T 14-10-2018 JO41_09775 bf458f2c9b489f29baf92a9d929b3698 546 Gene3D G3DSA:3.30.450.20 321 419 1.3E-5 T 14-10-2018 JO41_09775 bf458f2c9b489f29baf92a9d929b3698 546 Pfam PF13596 PAS domain 306 410 7.2E-25 T 14-10-2018 JO41_09775 bf458f2c9b489f29baf92a9d929b3698 546 Pfam PF08984 Domain of unknown function (DUF1858) 478 537 3.7E-9 T 14-10-2018 IPR015077 Domain of unknown function DUF1858 JO41_11280 0cf519a070d650edf47b12414b3f1edd 333 SUPERFAMILY SSF52540 8 308 1.54E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11280 0cf519a070d650edf47b12414b3f1edd 333 Gene3D G3DSA:3.40.50.300 3 213 2.9E-49 T 14-10-2018 JO41_11280 0cf519a070d650edf47b12414b3f1edd 333 Gene3D G3DSA:1.10.8.300 214 330 5.3E-37 T 14-10-2018 JO41_11280 0cf519a070d650edf47b12414b3f1edd 333 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 42 172 1.3E-61 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JO41_11280 0cf519a070d650edf47b12414b3f1edd 333 PIRSF PIRSF002849 1 333 9.8E-124 T 14-10-2018 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 SUPERFAMILY SSF46689 7 55 4.93E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 SMART SM00871 127 278 8.6E-25 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 7.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 7.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 Pfam PF06445 GyrI-like small molecule binding domain 127 277 9.8E-22 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 Gene3D G3DSA:1.10.10.60 58 116 4.3E-16 T 14-10-2018 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 Gene3D G3DSA:1.10.10.60 4 57 4.4E-8 T 14-10-2018 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 Gene3D G3DSA:3.20.80.10 127 279 2.2E-36 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 SUPERFAMILY SSF55136 127 279 2.04E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 Pfam PF12833 Helix-turn-helix domain 27 105 9.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 SUPERFAMILY SSF46689 58 106 3.32E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_07605 9e2f2366126d347531d91de14d5c29a6 280 SMART SM00342 21 104 1.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 Gene3D G3DSA:3.40.50.300 1 241 2.6E-60 T 14-10-2018 JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 Pfam PF00005 ABC transporter 283 422 1.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 Gene3D G3DSA:3.40.50.300 266 489 2.6E-54 T 14-10-2018 JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 SUPERFAMILY SSF52540 2 222 3.06E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 SMART SM00382 292 470 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 SMART SM00382 28 207 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 SUPERFAMILY SSF52540 265 477 1.55E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10370 a1a4d722e65a8c8b7cef1edc33365e4a 491 Pfam PF00005 ABC transporter 20 169 1.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 362 380 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 2.9E-90 T 14-10-2018 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 SUPERFAMILY SSF103491 4 420 1.44E-110 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 Pfam PF00344 SecY translocase 74 413 1.5E-104 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 420 9.3E-112 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 Gene3D G3DSA:1.10.3370.10 3 425 3.6E-146 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 429 28.417 T 14-10-2018 IPR026593 Protein translocase subunit SecY JO41_04375 24103a6eea80855fc943dfe956a7d6d6 439 PIRSF PIRSF004557 2 436 9.5E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO41_08900 8bd77abe6eabf9c34dd63b7e5e287402 263 SUPERFAMILY SSF52540 4 229 1.82E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08900 8bd77abe6eabf9c34dd63b7e5e287402 263 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_08900 8bd77abe6eabf9c34dd63b7e5e287402 263 Pfam PF00005 ABC transporter 19 167 1.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_08900 8bd77abe6eabf9c34dd63b7e5e287402 263 Gene3D G3DSA:3.40.50.300 1 257 1.2E-60 T 14-10-2018 JO41_08900 8bd77abe6eabf9c34dd63b7e5e287402 263 SMART SM00382 28 218 1.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_12200 fbc96cfa44f90fb8b28810c4ed1dcdf3 503 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 4 496 4.5E-133 T 14-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 JO41_12200 fbc96cfa44f90fb8b28810c4ed1dcdf3 503 Gene3D G3DSA:3.50.50.60 181 310 6.3E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_12200 fbc96cfa44f90fb8b28810c4ed1dcdf3 503 Gene3D G3DSA:3.50.50.60 1 110 5.3E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_12200 fbc96cfa44f90fb8b28810c4ed1dcdf3 503 SUPERFAMILY SSF51905 1 494 2.16E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_12200 fbc96cfa44f90fb8b28810c4ed1dcdf3 503 Pfam PF01593 Flavin containing amine oxidoreductase 11 493 1.7E-32 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 JO41_12200 fbc96cfa44f90fb8b28810c4ed1dcdf3 503 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 9.5E-5 T 14-10-2018 JO41_12200 fbc96cfa44f90fb8b28810c4ed1dcdf3 503 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 9.5E-5 T 14-10-2018 JO41_09175 e59aebf16a572db0006f99a86eb34075 256 SUPERFAMILY SSF52540 2 235 3.59E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09175 e59aebf16a572db0006f99a86eb34075 256 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 242 2.3E-96 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 JO41_09175 e59aebf16a572db0006f99a86eb34075 256 SMART SM00382 27 223 4.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09175 e59aebf16a572db0006f99a86eb34075 256 Gene3D G3DSA:3.40.50.300 1 253 1.4E-70 T 14-10-2018 JO41_09175 e59aebf16a572db0006f99a86eb34075 256 Pfam PF00005 ABC transporter 18 173 3.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 PRINTS PR00956 Flagellar motor switch protein FliN signature 335 348 4.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 PRINTS PR00956 Flagellar motor switch protein FliN signature 302 318 4.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 PRINTS PR00956 Flagellar motor switch protein FliN signature 348 363 4.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 PRINTS PR00956 Flagellar motor switch protein FliN signature 319 335 4.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 SUPERFAMILY SSF103039 30 208 6.8E-21 T 14-10-2018 IPR028976 CheC-like superfamily JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 Gene3D G3DSA:3.40.1550.10 29 214 1.2E-17 T 14-10-2018 IPR028976 CheC-like superfamily JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 Gene3D G3DSA:2.30.330.10 291 381 2.1E-33 T 14-10-2018 IPR036429 SpoA-like superfamily JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 299 373 9.8E-30 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 303 372 3.4E-24 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JO41_09470 afa5c9ff1123a6a8b09814ef4c2cf174 381 SUPERFAMILY SSF101801 300 378 3.14E-23 T 14-10-2018 IPR036429 SpoA-like superfamily JO41_07625 f3d6312eede588555c9abd7bbe28159a 201 SMART SM00028 120 153 0.35 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_07625 f3d6312eede588555c9abd7bbe28159a 201 SMART SM00028 154 187 0.024 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_07625 f3d6312eede588555c9abd7bbe28159a 201 Gene3D G3DSA:1.25.40.10 120 200 2.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_07625 f3d6312eede588555c9abd7bbe28159a 201 Pfam PF13181 Tetratricopeptide repeat 122 151 0.0052 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_07625 f3d6312eede588555c9abd7bbe28159a 201 Gene3D G3DSA:1.25.40.10 15 119 5.4E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_07625 f3d6312eede588555c9abd7bbe28159a 201 SUPERFAMILY SSF48452 20 191 4.17E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03210 00b955ca5349f2023ea8d86f0759d863 382 Gene3D G3DSA:3.40.718.10 91 235 1.2E-10 T 14-10-2018 JO41_03210 00b955ca5349f2023ea8d86f0759d863 382 PIRSF PIRSF036593 2 382 3.3E-143 T 14-10-2018 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit JO41_03210 00b955ca5349f2023ea8d86f0759d863 382 SUPERFAMILY SSF53659 30 231 2.16E-20 T 14-10-2018 JO41_03210 00b955ca5349f2023ea8d86f0759d863 382 Pfam PF02504 Fatty acid synthesis protein 30 360 1.8E-40 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 Gene3D G3DSA:3.40.50.1000 368 642 2.5E-78 T 14-10-2018 IPR023214 HAD superfamily JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 Pfam PF00702 haloacid dehalogenase-like hydrolase 384 604 5.9E-36 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 Gene3D G3DSA:2.70.150.20 174 299 1.3E-28 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 146 690 1.2E-149 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 590 606 1.6E-10 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 621 646 1.6E-10 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 562 578 1.6E-10 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 Pfam PF00122 E1-E2 ATPase 199 367 2.8E-37 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 389 395 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 SUPERFAMILY SSF81653 199 295 1.12E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 SUPERFAMILY SSF56784 385 687 5.05E-44 T 14-10-2018 IPR036412 HAD-like superfamily JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 183 666 2.5E-67 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 Gene3D G3DSA:3.40.1110.10 398 521 2.5E-78 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 609 2.9E-24 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 245 259 2.9E-24 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 525 2.9E-24 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 547 2.9E-24 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 387 401 2.9E-24 T 14-10-2018 JO41_07030 6ca4ec27e74f6bff3205a00e4b9f92ff 698 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 625 2.9E-24 T 14-10-2018 JO41_08985 61b676b3294dff65b64fb37b262bf135 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.6E-35 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08985 61b676b3294dff65b64fb37b262bf135 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_08985 61b676b3294dff65b64fb37b262bf135 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.6E-35 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08985 61b676b3294dff65b64fb37b262bf135 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 23.787 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_08985 61b676b3294dff65b64fb37b262bf135 104 SUPERFAMILY SSF141091 1 101 1.18E-33 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04140 d20922b456e3d98a96e44925a18b8233 600 SUPERFAMILY SSF52540 40 296 8.5E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04140 d20922b456e3d98a96e44925a18b8233 600 Gene3D G3DSA:3.40.1140.10 18 120 7.3E-7 T 14-10-2018 JO41_04140 d20922b456e3d98a96e44925a18b8233 600 Pfam PF13555 P-loop containing region of AAA domain 21 78 3.9E-18 T 14-10-2018 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 SUPERFAMILY SSF52374 5 330 9.05E-83 T 14-10-2018 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 Gene3D G3DSA:3.40.50.620 6 325 1.2E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 Pfam PF00579 tRNA synthetases class I (W and Y) 4 286 2.4E-80 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 146 167 6.7E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 197 207 6.7E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.7E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 6.7E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 329 4.3E-98 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 Gene3D G3DSA:1.10.240.10 184 298 1.2E-113 T 14-10-2018 JO41_07180 f9a636a5c7a969d38628ffbfe339c681 349 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 37.127 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 JO41_05850 2a49836cbd591a45f69d4b1e038b85a0 278 SUPERFAMILY SSF110997 196 269 2.62E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO41_05850 2a49836cbd591a45f69d4b1e038b85a0 278 Gene3D G3DSA:3.30.70.1070 196 272 4.4E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO41_05850 2a49836cbd591a45f69d4b1e038b85a0 278 Pfam PF05036 Sporulation related domain 197 266 2.0E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 SUPERFAMILY SSF48557 1 458 1.09E-146 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 Pfam PF10415 Fumarase C C-terminus 406 459 4.5E-21 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 Gene3D G3DSA:1.10.275.10 1 137 9.0E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 Gene3D G3DSA:1.10.40.30 406 457 5.7E-20 T 14-10-2018 JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 2 464 1.6E-215 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 Pfam PF00206 Lyase 12 340 1.9E-93 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family JO41_02830 05276660b1e69e00bb8be0ce79cd91b3 466 Gene3D G3DSA:1.20.200.10 138 405 2.4E-107 T 14-10-2018 JO41_07690 b1807d3a247493ef3d304acce55a775d 210 Gene3D G3DSA:3.30.240.20 156 210 1.2E-13 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily JO41_07690 b1807d3a247493ef3d304acce55a775d 210 Gene3D G3DSA:3.30.240.20 80 154 2.9E-16 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily JO41_07690 b1807d3a247493ef3d304acce55a775d 210 Pfam PF04239 Protein of unknown function (DUF421) 89 188 6.2E-31 T 14-10-2018 IPR007353 Protein of unknown function DUF421 JO41_02305 15b84ca62363cd37f9f50626e1d41a59 310 Gene3D G3DSA:2.70.70.10 165 307 5.7E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_02305 15b84ca62363cd37f9f50626e1d41a59 310 SUPERFAMILY SSF51261 67 303 4.45E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_02305 15b84ca62363cd37f9f50626e1d41a59 310 Pfam PF01551 Peptidase family M23 205 299 1.2E-31 T 14-10-2018 IPR016047 Peptidase M23 JO41_06870 0e43565c468eb2fb23caf3114928c1bb 136 Pfam PF13470 PIN domain 2 110 1.6E-9 T 14-10-2018 IPR002716 PIN domain JO41_06870 0e43565c468eb2fb23caf3114928c1bb 136 SMART SM00670 1 114 7.8E-4 T 14-10-2018 IPR002716 PIN domain JO41_06870 0e43565c468eb2fb23caf3114928c1bb 136 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 112 3.4E-11 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_06870 0e43565c468eb2fb23caf3114928c1bb 136 SUPERFAMILY SSF88723 2 118 8.69E-12 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_11970 d8033fc50cb9a75b0a3aca90b8d9eb5e 276 Pfam PF13419 Haloacid dehalogenase-like hydrolase 138 227 5.6E-7 T 14-10-2018 JO41_11970 d8033fc50cb9a75b0a3aca90b8d9eb5e 276 Gene3D G3DSA:3.40.50.1000 139 229 1.7E-6 T 14-10-2018 IPR023214 HAD superfamily JO41_11970 d8033fc50cb9a75b0a3aca90b8d9eb5e 276 SUPERFAMILY SSF56784 7 235 1.67E-13 T 14-10-2018 IPR036412 HAD-like superfamily JO41_11970 d8033fc50cb9a75b0a3aca90b8d9eb5e 276 Gene3D G3DSA:1.10.150.240 82 138 1.7E-6 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JO41_01820 94b0e470b702bd66c428d3fc5266ba33 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 57 8.2E-16 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO41_01820 94b0e470b702bd66c428d3fc5266ba33 59 Gene3D G3DSA:1.20.5.1030 1 58 5.1E-18 T 14-10-2018 IPR038379 SecE superfamily JO41_01820 94b0e470b702bd66c428d3fc5266ba33 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.597 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JO41_01820 94b0e470b702bd66c428d3fc5266ba33 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 4 59 3.2E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 Pfam PF00176 SNF2 family N-terminal domain 798 1061 2.7E-54 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 Gene3D G3DSA:3.40.50.300 1000 1203 5.9E-82 T 14-10-2018 JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 SUPERFAMILY SSF52540 995 1244 4.13E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 SMART SM00490 1105 1189 6.1E-18 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 Gene3D G3DSA:1.20.120.850 1015 1239 5.9E-82 T 14-10-2018 JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 Gene3D G3DSA:3.40.50.10810 765 990 1.4E-63 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 Pfam PF12419 SNF2 Helicase protein 623 741 7.8E-27 T 14-10-2018 IPR022138 Helicase SWF/SNF-related JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 Pfam PF04434 SWIM zinc finger 122 142 4.1E-5 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 Pfam PF00271 Helicase conserved C-terminal domain 1077 1189 4.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 SUPERFAMILY SSF52540 769 991 1.22E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00820 f9c4108a6174156f9e56bdb1dc926304 1244 SMART SM00487 780 965 2.1E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_10290 7bff0de44970648c7d8783e7e2c89dd1 254 SMART SM00967 10 86 9.7E-9 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JO41_10290 7bff0de44970648c7d8783e7e2c89dd1 254 SUPERFAMILY SSF55315 7 81 1.07E-9 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JO41_10290 7bff0de44970648c7d8783e7e2c89dd1 254 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 11 83 7.1E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JO41_10290 7bff0de44970648c7d8783e7e2c89dd1 254 SUPERFAMILY SSF75217 75 246 1.83E-27 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO41_10290 7bff0de44970648c7d8783e7e2c89dd1 254 Pfam PF00588 SpoU rRNA Methylase family 103 245 7.4E-28 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JO41_10290 7bff0de44970648c7d8783e7e2c89dd1 254 Gene3D G3DSA:3.40.1280.10 87 252 7.7E-35 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_10290 7bff0de44970648c7d8783e7e2c89dd1 254 Gene3D G3DSA:3.30.1330.30 2 82 1.6E-7 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Gene3D G3DSA:2.40.30.10 288 399 1.3E-35 T 14-10-2018 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Pfam PF03764 Elongation factor G, domain IV 473 599 3.5E-24 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 SUPERFAMILY SSF54980 398 475 1.29E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 SUPERFAMILY SSF54980 605 684 5.76E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Gene3D G3DSA:3.30.230.10 478 679 3.3E-62 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Pfam PF00679 Elongation factor G C-terminus 602 680 3.3E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 SMART SM00838 602 680 3.9E-27 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Gene3D G3DSA:3.30.70.240 606 676 3.3E-62 T 14-10-2018 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 679 7.5E-255 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Pfam PF03144 Elongation factor Tu domain 2 318 384 1.6E-14 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 SMART SM00889 474 600 1.5E-26 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Gene3D G3DSA:3.30.70.870 400 474 6.5E-27 T 14-10-2018 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Pfam PF14492 Elongation Factor G, domain II 398 471 1.2E-27 T 14-10-2018 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 SUPERFAMILY SSF52540 3 275 1.86E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 SUPERFAMILY SSF54211 473 601 6.32E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Hamap MF_00054_B Elongation factor G [fusA]. 1 683 94.876 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Gene3D G3DSA:3.40.50.300 2 287 1.2E-106 T 14-10-2018 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 PRINTS PR00315 GTP-binding elongation factor signature 73 83 4.2E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 PRINTS PR00315 GTP-binding elongation factor signature 89 100 4.2E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 PRINTS PR00315 GTP-binding elongation factor signature 7 20 4.2E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 PRINTS PR00315 GTP-binding elongation factor signature 53 61 4.2E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 PRINTS PR00315 GTP-binding elongation factor signature 125 134 4.2E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 Pfam PF00009 Elongation factor Tu GTP binding domain 4 275 2.3E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 150 1.3E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_02665 d835a71084fd14c48b98b3e9afbd7519 687 SUPERFAMILY SSF50447 260 398 4.01E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_04740 dd4e10d89d4bb51abb94c825e47c2866 147 SUPERFAMILY SSF49764 11 145 4.97E-34 T 14-10-2018 IPR008978 HSP20-like chaperone JO41_04740 dd4e10d89d4bb51abb94c825e47c2866 147 Pfam PF00011 Hsp20/alpha crystallin family 41 144 1.7E-23 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain JO41_04740 dd4e10d89d4bb51abb94c825e47c2866 147 Gene3D G3DSA:2.60.40.790 2 145 1.2E-33 T 14-10-2018 IPR008978 HSP20-like chaperone JO41_12100 6bef04c12d1bd7c4adb79133072bcf87 441 SUPERFAMILY SSF51556 59 351 7.56E-70 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_12100 6bef04c12d1bd7c4adb79133072bcf87 441 SUPERFAMILY SSF51338 1 438 4.46E-29 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_12100 6bef04c12d1bd7c4adb79133072bcf87 441 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 441 9.6E-190 T 14-10-2018 IPR017700 Putative aminohydrolase SsnA JO41_12100 6bef04c12d1bd7c4adb79133072bcf87 441 Pfam PF01979 Amidohydrolase family 57 411 2.1E-36 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO41_12100 6bef04c12d1bd7c4adb79133072bcf87 441 Gene3D G3DSA:3.20.20.140 60 354 3.8E-101 T 14-10-2018 JO41_12100 6bef04c12d1bd7c4adb79133072bcf87 441 Gene3D G3DSA:2.30.40.10 4 430 3.8E-101 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_05820 56ad0f2abe20d84c059daa780cd8dc91 554 Gene3D G3DSA:3.10.410.10 442 531 1.1E-31 T 14-10-2018 JO41_05820 56ad0f2abe20d84c059daa780cd8dc91 554 Gene3D G3DSA:3.30.1510.10 128 245 6.6E-181 T 14-10-2018 JO41_05820 56ad0f2abe20d84c059daa780cd8dc91 554 Pfam PF01268 Formate--tetrahydrofolate ligase 2 553 5.9E-237 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JO41_05820 56ad0f2abe20d84c059daa780cd8dc91 554 SUPERFAMILY SSF52540 4 546 1.28E-210 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05820 56ad0f2abe20d84c059daa780cd8dc91 554 Gene3D G3DSA:3.40.50.300 6 427 6.6E-181 T 14-10-2018 JO41_05820 56ad0f2abe20d84c059daa780cd8dc91 554 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 554 43.404 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JO41_05820 56ad0f2abe20d84c059daa780cd8dc91 554 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 102 112 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JO41_04410 ccbb6a59dcdf9fcb664200b32986069f 183 Gene3D G3DSA:3.30.1440.10 4 183 1.0E-76 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04410 ccbb6a59dcdf9fcb664200b32986069f 183 Pfam PF00673 ribosomal L5P family C-terminus 88 181 5.1E-39 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04410 ccbb6a59dcdf9fcb664200b32986069f 183 SUPERFAMILY SSF55282 7 183 2.59E-75 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04410 ccbb6a59dcdf9fcb664200b32986069f 183 ProSitePatterns PS00358 Ribosomal protein L5 signature. 61 77 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04410 ccbb6a59dcdf9fcb664200b32986069f 183 Pfam PF00281 Ribosomal protein L5 29 84 4.8E-27 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04410 ccbb6a59dcdf9fcb664200b32986069f 183 PIRSF PIRSF002161 2 183 4.5E-64 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04410 ccbb6a59dcdf9fcb664200b32986069f 183 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 5 183 42.986 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_02495 e6eab262a9a1d249f881f70a58c2f941 435 Gene3D G3DSA:3.20.20.140 1 196 8.2E-40 T 14-10-2018 JO41_02495 e6eab262a9a1d249f881f70a58c2f941 435 ProSitePatterns PS00483 Dihydroorotase signature 2. 298 309 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JO41_02495 e6eab262a9a1d249f881f70a58c2f941 435 Gene3D G3DSA:3.20.20.140 197 417 2.6E-65 T 14-10-2018 JO41_02495 e6eab262a9a1d249f881f70a58c2f941 435 SUPERFAMILY SSF51338 49 422 7.28E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_02495 e6eab262a9a1d249f881f70a58c2f941 435 Pfam PF01979 Amidohydrolase family 66 413 1.1E-26 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO41_02495 e6eab262a9a1d249f881f70a58c2f941 435 SUPERFAMILY SSF51556 70 359 7.78E-75 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_00465 6eb4ff15209df4281abde4f6e588c5cf 228 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 48 211 1.0E-14 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like JO41_00465 6eb4ff15209df4281abde4f6e588c5cf 228 SUPERFAMILY SSF89392 31 222 8.24E-27 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX JO41_00465 6eb4ff15209df4281abde4f6e588c5cf 228 Gene3D G3DSA:2.50.20.10 30 222 3.6E-33 T 14-10-2018 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 SMART SM00487 1865 2135 1.5E-5 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 Gene3D G3DSA:3.40.50.150 1204 1407 1.6E-26 T 14-10-2018 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 SUPERFAMILY SSF53335 1197 1395 1.84E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 SUPERFAMILY SSF52540 2195 2443 7.86E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 Pfam PF00176 SNF2 family N-terminal domain 1883 2145 7.3E-8 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1297 1303 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 Pfam PF02384 N-6 DNA Methylase 1203 1394 2.6E-8 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 Gene3D G3DSA:3.40.50.300 2195 2467 3.8E-21 T 14-10-2018 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 SUPERFAMILY SSF52540 1868 2144 5.52E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 Pfam PF00271 Helicase conserved C-terminal domain 2279 2389 9.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1228 1242 4.3E-12 T 14-10-2018 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1202 1218 4.3E-12 T 14-10-2018 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1321 1345 4.3E-12 T 14-10-2018 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1294 1306 4.3E-12 T 14-10-2018 JO41_02145 ae72b4e4d78d227329eed05ec5ff8c23 2963 SMART SM00490 2302 2389 0.0055 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_01235 77c784ab6457932664de56ae556e42bf 638 Pfam PF01751 Toprim domain 424 527 6.6E-16 T 14-10-2018 IPR006171 TOPRIM domain JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 425 439 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 509 526 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 70 83 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 113 127 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 491 507 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 529 541 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 571 587 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 270 283 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR00418 DNA topoisomerase II family signature 35 50 2.8E-72 T 14-10-2018 JO41_01235 77c784ab6457932664de56ae556e42bf 638 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 628 1.9E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 SMART SM00433 35 632 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_01235 77c784ab6457932664de56ae556e42bf 638 Gene3D G3DSA:3.30.230.10 222 403 1.6E-71 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_01235 77c784ab6457932664de56ae556e42bf 638 SUPERFAMILY SSF55874 6 213 3.14E-67 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_01235 77c784ab6457932664de56ae556e42bf 638 SUPERFAMILY SSF56719 399 630 1.49E-89 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO41_01235 77c784ab6457932664de56ae556e42bf 638 SMART SM00387 31 175 1.6E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_01235 77c784ab6457932664de56ae556e42bf 638 SUPERFAMILY SSF54211 223 396 1.01E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_01235 77c784ab6457932664de56ae556e42bf 638 Gene3D G3DSA:3.30.565.10 3 221 5.7E-85 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_01235 77c784ab6457932664de56ae556e42bf 638 Gene3D G3DSA:3.40.50.670 404 638 4.1E-104 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_01235 77c784ab6457932664de56ae556e42bf 638 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 637 1.3E-304 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 174 2.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_01235 77c784ab6457932664de56ae556e42bf 638 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 638 87.632 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 Pfam PF00204 DNA gyrase B 223 395 5.5E-63 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_01235 77c784ab6457932664de56ae556e42bf 638 ProSitePatterns PS00177 DNA topoisomerase II signature. 427 435 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 181 196 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 379 399 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 475 484 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 608 624 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 6 16 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 365 379 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 196 209 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 222 244 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 317 333 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_01235 77c784ab6457932664de56ae556e42bf 638 PRINTS PR01159 DNA gyrase subunit B signature 592 604 8.9E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 PRINTS PR00906 SecA protein signature 171 191 7.7E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 PRINTS PR00906 SecA protein signature 102 116 7.7E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 PRINTS PR00906 SecA protein signature 383 400 7.7E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 PRINTS PR00906 SecA protein signature 420 433 7.7E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 PRINTS PR00906 SecA protein signature 64 88 7.7E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 PRINTS PR00906 SecA protein signature 346 368 7.7E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 PRINTS PR00906 SecA protein signature 118 128 7.7E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 SMART SM00958 229 365 1.9E-60 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Hamap MF_01382 Protein translocase subunit SecA [secA]. 6 844 19.602 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Pfam PF07517 SecA DEAD-like domain 8 409 5.0E-124 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Gene3D G3DSA:3.40.50.300 25 422 2.2E-161 T 14-10-2018 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 ProSitePatterns PS01312 SecA family signature. 507 522 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Pfam PF01043 SecA preprotein cross-linking domain 234 365 1.5E-33 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Gene3D G3DSA:3.90.1440.10 230 375 2.2E-161 T 14-10-2018 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 29 830 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 SUPERFAMILY SSF81767 228 373 1.7E-36 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Gene3D G3DSA:3.40.50.300 424 632 9.4E-89 T 14-10-2018 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Pfam PF02810 SEC-C motif 897 915 3.2E-10 T 14-10-2018 IPR004027 SEC-C motif JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 SUPERFAMILY SSF81886 633 905 1.14E-68 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Gene3D G3DSA:1.10.3060.10 634 844 4.2E-60 T 14-10-2018 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Pfam PF07516 SecA Wing and Scaffold domain 630 840 5.6E-60 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Gene3D G3DSA:3.10.450.50 858 915 9.2E-10 T 14-10-2018 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 SMART SM00957 7 409 2.1E-252 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 Pfam PF00271 Helicase conserved C-terminal domain 440 521 3.2E-4 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 SUPERFAMILY SSF52540 6 422 3.55E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06845 c6941cc0bd5fe9b159d5e21e2d9b4ae7 915 SUPERFAMILY SSF52540 424 631 5.5E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 Gene3D G3DSA:3.50.40.10 96 293 6.6E-51 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 Gene3D G3DSA:3.30.56.10 1 81 1.2E-20 T 14-10-2018 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 Gene3D G3DSA:3.30.930.10 384 573 3.4E-41 T 14-10-2018 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 Hamap MF_00284 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 570 30.703 T 14-10-2018 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 Pfam PF03484 tRNA synthetase B5 domain 304 363 5.9E-13 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 SMART SM00873 113 273 2.6E-4 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 TIGRFAM TIGR00471 pheT_arch: phenylalanine--tRNA ligase, beta subunit 1 572 7.9E-158 T 14-10-2018 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 SMART SM00874 299 367 8.6E-14 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 Gene3D G3DSA:3.30.56.10 300 365 1.7E-14 T 14-10-2018 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 SUPERFAMILY SSF55681 383 573 1.69E-35 T 14-10-2018 JO41_04500 1e270f8be5fddf8674e69cbf5a7b88de 582 SUPERFAMILY SSF46955 303 363 7.87E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 369 594 7.5E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 SUPERFAMILY SSF88659 503 605 4.3E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Gene3D G3DSA:1.10.10.10 529 607 4.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Gene3D G3DSA:1.10.601.10 117 445 3.5E-79 T 14-10-2018 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 SUPERFAMILY SSF88659 446 519 6.21E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Pfam PF03979 Sigma-70 factor, region 1.1 10 82 1.8E-11 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 397 410 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 566 592 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Gene3D G3DSA:1.10.10.10 446 522 4.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 PRINTS PR00046 Major sigma-70 factor signature 566 581 3.9E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 PRINTS PR00046 Major sigma-70 factor signature 421 429 3.9E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 PRINTS PR00046 Major sigma-70 factor signature 581 592 3.9E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 PRINTS PR00046 Major sigma-70 factor signature 397 410 3.9E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 PRINTS PR00046 Major sigma-70 factor signature 545 557 3.9E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 SUPERFAMILY SSF88946 118 443 1.21E-54 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 606 36.789 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 369 605 3.9E-119 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Pfam PF04539 Sigma-70 region 3 452 527 1.1E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Pfam PF04545 Sigma-70, region 4 541 594 1.0E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Pfam PF00140 Sigma-70 factor, region 1.2 119 150 2.3E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Gene3D G3DSA:1.10.220.120 7 67 7.5E-11 T 14-10-2018 JO41_10680 5a1288f66983ab3cd0c2f5bfb225a32d 607 Pfam PF04542 Sigma-70 region 2 373 442 7.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Gene3D G3DSA:1.10.1780.10 1 148 2.3E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.0E-11 T 14-10-2018 IPR004176 Clp, N-terminal JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.1E-9 T 14-10-2018 IPR004176 Clp, N-terminal JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 SUPERFAMILY SSF52540 550 840 2.17E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 SUPERFAMILY SSF52540 158 549 3.45E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Gene3D G3DSA:1.10.8.60 767 858 8.1E-28 T 14-10-2018 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 SMART SM00382 601 743 4.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 SMART SM00382 198 344 3.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Gene3D G3DSA:3.40.50.300 343 548 2.3E-70 T 14-10-2018 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 846 1.1E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 SUPERFAMILY SSF81923 4 155 2.06E-40 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 760 6.1E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 3.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 3.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 3.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 3.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Gene3D G3DSA:3.40.50.300 554 765 8.5E-88 T 14-10-2018 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 SMART SM01086 767 856 8.9E-39 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Gene3D G3DSA:3.40.50.300 149 342 2.0E-74 T 14-10-2018 JO41_04185 8efd7f398248ab4bd199cd3d7b580826 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 319 3.9E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 SUPERFAMILY SSF53784 50 445 1.01E-116 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 PIRSF PIRSF000534 1 444 2.5E-204 T 14-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 Gene3D G3DSA:3.40.50.450 76 269 1.4E-56 T 14-10-2018 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 Pfam PF00365 Phosphofructokinase 83 388 4.5E-62 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 Hamap MF_01981 ATP-dependent 6-phosphofructokinase [pfkA]. 7 440 54.132 T 14-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 172 188 1.2E-25 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 84 103 1.2E-25 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 301 313 1.2E-25 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 223 241 1.2E-25 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 260 1.2E-25 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_05700 bb3960d79bcf4d7ce81a6ad185e68f3c 455 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 205 222 1.2E-25 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_08125 fab38fcce6d70a51cc9c33b2d108a031 124 SUPERFAMILY SSF54001 5 110 1.81E-9 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO41_08125 fab38fcce6d70a51cc9c33b2d108a031 124 Pfam PF00877 NlpC/P60 family 10 107 2.3E-6 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JO41_08125 fab38fcce6d70a51cc9c33b2d108a031 124 Gene3D G3DSA:3.90.1720.10 2 118 5.4E-10 T 14-10-2018 JO41_04470 e922f6726dc212a3d22de2897b229373 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 204 34.245 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04470 e922f6726dc212a3d22de2897b229373 208 SUPERFAMILY SSF50447 1 206 3.18E-68 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_04470 e922f6726dc212a3d22de2897b229373 208 Pfam PF00297 Ribosomal protein L3 98 178 8.8E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04470 e922f6726dc212a3d22de2897b229373 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 201 2.4E-74 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04470 e922f6726dc212a3d22de2897b229373 208 Gene3D G3DSA:2.40.30.10 127 207 5.1E-15 T 14-10-2018 JO41_04470 e922f6726dc212a3d22de2897b229373 208 Gene3D G3DSA:2.40.50.620 32 94 1.5E-7 T 14-10-2018 JO41_04470 e922f6726dc212a3d22de2897b229373 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 99 122 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site JO41_04465 007b9f38e49a8509bf88ef1b4c030087 212 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 7.7E-59 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 JO41_04465 007b9f38e49a8509bf88ef1b4c030087 212 Gene3D G3DSA:3.40.1370.10 1 209 1.1E-66 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04465 007b9f38e49a8509bf88ef1b4c030087 212 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 203 9.0E-66 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04465 007b9f38e49a8509bf88ef1b4c030087 212 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 207 30.515 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04465 007b9f38e49a8509bf88ef1b4c030087 212 SUPERFAMILY SSF52166 1 206 3.27E-66 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 PRINTS PR01050 Pyruvate kinase family signature 312 328 1.9E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 PRINTS PR01050 Pyruvate kinase family signature 268 292 1.9E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.9E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 PRINTS PR01050 Pyruvate kinase family signature 293 311 1.9E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.9E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 PRINTS PR01050 Pyruvate kinase family signature 216 242 1.9E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 PRINTS PR01050 Pyruvate kinase family signature 243 267 1.9E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 SUPERFAMILY SSF52009 465 582 1.11E-20 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 3.0E-184 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 Gene3D G3DSA:3.40.1380.20 335 468 3.7E-192 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 SUPERFAMILY SSF51621 1 342 9.77E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 469 2.3E-36 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 Gene3D G3DSA:3.20.20.60 2 334 3.7E-192 T 14-10-2018 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 Gene3D G3DSA:3.50.30.10 474 586 1.3E-23 T 14-10-2018 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 505 576 3.5E-14 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 2.7E-140 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 SUPERFAMILY SSF52935 322 473 1.31E-44 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 Gene3D G3DSA:2.40.33.10 70 167 3.7E-192 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JO41_03185 76c1020e50cd66e812012dc1b4624cfe 586 SUPERFAMILY SSF50800 71 166 1.31E-26 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 Gene3D G3DSA:3.40.50.720 259 542 2.0E-98 T 14-10-2018 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 SUPERFAMILY SSF51735 262 542 4.81E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 Gene3D G3DSA:3.40.50.10380 3 258 2.4E-89 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 Pfam PF00390 Malic enzyme, N-terminal domain 70 251 4.9E-63 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 ProSitePatterns PS00331 Malic enzymes signature. 257 273 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 SUPERFAMILY SSF53223 4 260 1.15E-90 T 14-10-2018 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 Pfam PF03949 Malic enzyme, NAD binding domain 262 516 1.2E-96 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PRINTS PR00072 Malic enzyme signature 137 166 1.8E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PRINTS PR00072 Malic enzyme signature 75 99 1.8E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PRINTS PR00072 Malic enzyme signature 232 250 1.8E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PRINTS PR00072 Malic enzyme signature 288 304 1.8E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PRINTS PR00072 Malic enzyme signature 257 273 1.8E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PRINTS PR00072 Malic enzyme signature 173 195 1.8E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PRINTS PR00072 Malic enzyme signature 395 411 1.8E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 PIRSF PIRSF000106 1 542 3.0E-203 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 SMART SM01274 69 251 1.7E-77 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JO41_05735 699bcab8a0a7fd1fbc75a2e577a24ea4 542 SMART SM00919 261 517 3.1E-109 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JO41_05215 d1730e3ee7f47c676c51a23a6765cfd4 584 Gene3D G3DSA:2.40.160.130 30 455 1.1E-7 T 14-10-2018 IPR038636 Capsule assembly protein Wzi superfamily JO41_12125 beaa9824f4dd5993212e19630d9fdb61 408 Pfam PF12773 Double zinc ribbon 362 405 1.6E-7 T 14-10-2018 IPR025874 Double zinc ribbon JO41_12125 beaa9824f4dd5993212e19630d9fdb61 408 Pfam PF13421 SPFH domain-Band 7 family 55 268 3.2E-22 T 14-10-2018 IPR033880 SPFH domain, YdjI-like JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 Gene3D G3DSA:1.10.8.540 506 594 1.1E-30 T 14-10-2018 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 9 695 3.7E-254 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 PIRSF PIRSF005419 1 701 7.7E-241 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 Gene3D G3DSA:1.10.490.80 596 695 4.1E-8 T 14-10-2018 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 Pfam PF00771 FHIPEP family 19 687 1.3E-237 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 Gene3D G3DSA:3.40.30.60 362 505 3.1E-54 T 14-10-2018 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 26 39 5.6E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 131 147 5.6E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 63 82 5.6E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 150 168 5.6E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 180 197 5.6E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_09500 ad0240ea543a4c85b1fe2b3bf4d08193 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 231 245 5.6E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JO41_02400 700b9e42a9002c0015d3034b1aa67c76 238 Pfam PF01048 Phosphorylase superfamily 2 235 1.8E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JO41_02400 700b9e42a9002c0015d3034b1aa67c76 238 Gene3D G3DSA:3.40.50.1580 1 237 1.1E-55 T 14-10-2018 JO41_02400 700b9e42a9002c0015d3034b1aa67c76 238 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 235 1.4E-45 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JO41_02400 700b9e42a9002c0015d3034b1aa67c76 238 SUPERFAMILY SSF53167 1 236 3.27E-57 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JO41_04095 b8c95621eebd86af90d135da982d88cb 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 2.9E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_04095 b8c95621eebd86af90d135da982d88cb 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 302 321 2.9E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_04095 b8c95621eebd86af90d135da982d88cb 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 2.9E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_04095 b8c95621eebd86af90d135da982d88cb 441 SUPERFAMILY SSF161070 8 437 1.83E-122 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 JO41_04095 b8c95621eebd86af90d135da982d88cb 441 Pfam PF00209 Sodium:neurotransmitter symporter family 8 127 4.9E-20 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_04095 b8c95621eebd86af90d135da982d88cb 441 Pfam PF00209 Sodium:neurotransmitter symporter family 156 377 7.3E-28 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 SUPERFAMILY SSF110942 522 636 2.09E-35 T 14-10-2018 IPR037196 HSP90, C-terminal domain JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 Gene3D G3DSA:3.30.565.10 1 235 8.2E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 Gene3D G3DSA:1.20.120.790 503 636 2.4E-46 T 14-10-2018 IPR037196 HSP90, C-terminal domain JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PIRSF PIRSF002583 1 637 3.7E-211 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PRINTS PR00775 90kDa heat shock protein signature 119 141 2.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PRINTS PR00775 90kDa heat shock protein signature 198 216 2.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PRINTS PR00775 90kDa heat shock protein signature 2 22 2.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PRINTS PR00775 90kDa heat shock protein signature 92 109 2.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PRINTS PR00775 90kDa heat shock protein signature 180 197 2.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PRINTS PR00775 90kDa heat shock protein signature 74 91 2.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 PRINTS PR00775 90kDa heat shock protein signature 23 45 2.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 Gene3D G3DSA:3.40.50.11260 411 497 2.2E-29 T 14-10-2018 JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 173 3.3E-15 T 14-10-2018 JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 Pfam PF00183 Hsp90 protein 230 636 5.5E-121 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 SMART SM00387 24 192 4.4E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 Gene3D G3DSA:3.30.230.80 243 410 3.9E-63 T 14-10-2018 JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 SUPERFAMILY SSF55874 2 219 7.2E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 SUPERFAMILY SSF54211 244 496 1.14E-91 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_05035 c7ab2aaa28bed45e82933d82952899c3 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 636 30.917 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JO41_04680 edd9a8711792a8a03e28abe442337a6f 341 SUPERFAMILY SSF53850 39 334 2.92E-52 T 14-10-2018 JO41_04680 edd9a8711792a8a03e28abe442337a6f 341 Gene3D G3DSA:3.40.190.10 41 307 2.5E-63 T 14-10-2018 JO41_04680 edd9a8711792a8a03e28abe442337a6f 341 Gene3D G3DSA:3.40.190.10 142 311 2.5E-63 T 14-10-2018 JO41_04680 edd9a8711792a8a03e28abe442337a6f 341 PIRSF PIRSF002825 1 339 3.4E-57 T 14-10-2018 IPR026045 Ferric binding protein JO41_04680 edd9a8711792a8a03e28abe442337a6f 341 Pfam PF13343 Bacterial extracellular solute-binding protein 91 299 6.6E-30 T 14-10-2018 JO41_08325 2fbcf30c04759eff6d071c8a442e5ffc 252 Gene3D G3DSA:3.40.50.300 75 250 5.4E-21 T 14-10-2018 JO41_08325 2fbcf30c04759eff6d071c8a442e5ffc 252 SUPERFAMILY SSF52540 81 222 5.8E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08325 2fbcf30c04759eff6d071c8a442e5ffc 252 Pfam PF01695 IstB-like ATP binding protein 97 224 2.5E-6 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 Gene3D G3DSA:3.40.50.150 10 254 8.5E-83 T 14-10-2018 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 TIGRFAM TIGR00571 dam: DNA adenine methylase 8 292 1.2E-86 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 14 277 1.5E-62 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 PIRSF PIRSF000398 5 295 2.9E-81 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 36 50 3.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 59 72 3.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 14 30 3.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 194 206 3.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 Gene3D G3DSA:1.10.1020.10 66 175 8.5E-83 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 JO41_08580 0bc04c2e344c9307303f06b3372ec898 295 SUPERFAMILY SSF53335 8 292 3.71E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 Pfam PF03796 DnaB-like helicase C terminal domain 191 435 1.1E-85 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 SMART SM00382 208 402 0.0013 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 SUPERFAMILY SSF52540 190 429 2.19E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 Gene3D G3DSA:1.10.860.10 9 172 3.5E-51 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 Gene3D G3DSA:3.40.50.300 174 440 3.3E-88 T 14-10-2018 JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 Pfam PF00772 DnaB-like helicase N terminal domain 16 116 3.7E-33 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 SUPERFAMILY SSF48024 14 124 5.75E-35 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 JO41_11770 a05ab0a20b07599ba1c540e0767854bc 441 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 438 1.3E-139 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 JO41_08640 f36383626bc0b2411c23e5d429bbcae9 398 Gene3D G3DSA:3.90.1150.10 3 389 5.5E-142 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_08640 f36383626bc0b2411c23e5d429bbcae9 398 Pfam PF00266 Aminotransferase class-V 16 385 2.5E-128 T 14-10-2018 IPR000192 Aminotransferase class V domain JO41_08640 f36383626bc0b2411c23e5d429bbcae9 398 Gene3D G3DSA:3.40.640.10 26 286 5.5E-142 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_08640 f36383626bc0b2411c23e5d429bbcae9 398 SUPERFAMILY SSF53383 2 393 7.15E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_08640 f36383626bc0b2411c23e5d429bbcae9 398 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 3 397 1.0E-149 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JO41_08640 f36383626bc0b2411c23e5d429bbcae9 398 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 207 226 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 Gene3D G3DSA:3.50.50.60 185 497 2.4E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 SUPERFAMILY SSF46548 31 192 6.8E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 SUPERFAMILY SSF51971 180 435 7.65E-65 T 14-10-2018 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 182 490 3.3E-34 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 Gene3D G3DSA:3.50.50.60 282 435 2.4E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 52 501 2.7E-197 T 14-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 58 169 9.8E-40 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 PRINTS PR00419 Adrenodoxin reductase family signature 359 372 3.0E-20 T 14-10-2018 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 PRINTS PR00419 Adrenodoxin reductase family signature 248 258 3.0E-20 T 14-10-2018 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 PRINTS PR00419 Adrenodoxin reductase family signature 206 219 3.0E-20 T 14-10-2018 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 PRINTS PR00419 Adrenodoxin reductase family signature 325 339 3.0E-20 T 14-10-2018 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 PRINTS PR00419 Adrenodoxin reductase family signature 183 205 3.0E-20 T 14-10-2018 JO41_04085 0f124cf7c53ff3d4a5fe08861bc89370 503 Gene3D G3DSA:1.10.1060.10 23 183 1.6E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 Pfam PF00703 Glycosyl hydrolases family 2 163 271 2.5E-11 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 SUPERFAMILY SSF51445 268 557 1.95E-55 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 Gene3D G3DSA:2.60.120.260 2 159 1.1E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 Gene3D G3DSA:3.20.20.80 276 563 6.7E-57 T 14-10-2018 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 SUPERFAMILY SSF49785 2 160 3.12E-37 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 Gene3D G3DSA:2.60.40.10 661 719 3.1E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 278 480 8.2E-27 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 324 349 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 Gene3D G3DSA:2.60.40.10 162 271 1.6E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 PRINTS PR00132 Glycosyl hydrolase family 2 signature 82 97 7.9E-12 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 PRINTS PR00132 Glycosyl hydrolase family 2 signature 282 296 7.9E-12 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 PRINTS PR00132 Glycosyl hydrolase family 2 signature 314 332 7.9E-12 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 PRINTS PR00132 Glycosyl hydrolase family 2 signature 378 393 7.9E-12 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 SUPERFAMILY SSF49303 177 271 1.78E-11 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 378 393 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JO41_00780 606f1cf9d9611e6da3b36ed29d3c1f02 756 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 50 160 5.5E-17 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JO41_11155 c7dfe5dec2f76a36e78478c5d3ef8cad 157 Gene3D G3DSA:2.40.50.180 28 141 2.9E-36 T 14-10-2018 JO41_11155 c7dfe5dec2f76a36e78478c5d3ef8cad 157 SMART SM00260 5 146 9.5E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO41_11155 c7dfe5dec2f76a36e78478c5d3ef8cad 157 SUPERFAMILY SSF50341 3 148 4.84E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JO41_11155 c7dfe5dec2f76a36e78478c5d3ef8cad 157 Pfam PF01584 CheW-like domain 9 147 6.5E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO41_11155 c7dfe5dec2f76a36e78478c5d3ef8cad 157 Gene3D G3DSA:2.30.30.40 11 140 2.9E-36 T 14-10-2018 JO41_04190 41e4065d425acc2ec283d04bbd43204a 318 SUPERFAMILY SSF51556 1 267 1.31E-34 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_04190 41e4065d425acc2ec283d04bbd43204a 318 Gene3D G3DSA:3.20.20.140 38 287 2.5E-35 T 14-10-2018 JO41_04190 41e4065d425acc2ec283d04bbd43204a 318 PIRSF PIRSF005902 290 317 420.0 T 14-10-2018 IPR001130 TatD family GO:0016788 JO41_04190 41e4065d425acc2ec283d04bbd43204a 318 PIRSF PIRSF005902 1 282 3.3E-36 T 14-10-2018 IPR001130 TatD family GO:0016788 JO41_04190 41e4065d425acc2ec283d04bbd43204a 318 Pfam PF01026 TatD related DNase 3 272 2.2E-35 T 14-10-2018 IPR001130 TatD family GO:0016788 JO41_05650 96f5fabbcc50793aa0ec237081e1185c 610 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 9 605 1.5E-205 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 JO41_05650 96f5fabbcc50793aa0ec237081e1185c 610 Pfam PF08439 Oligopeptidase F 121 193 6.8E-16 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain JO41_05650 96f5fabbcc50793aa0ec237081e1185c 610 Gene3D G3DSA:1.10.287.830 191 236 1.6E-11 T 14-10-2018 JO41_05650 96f5fabbcc50793aa0ec237081e1185c 610 Pfam PF01432 Peptidase family M3 216 593 1.1E-63 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JO41_05650 96f5fabbcc50793aa0ec237081e1185c 610 Gene3D G3DSA:1.10.1370.20 237 609 1.4E-123 T 14-10-2018 JO41_05650 96f5fabbcc50793aa0ec237081e1185c 610 Gene3D G3DSA:1.20.140.70 26 189 3.6E-27 T 14-10-2018 JO41_05650 96f5fabbcc50793aa0ec237081e1185c 610 SUPERFAMILY SSF55486 4 590 2.81E-97 T 14-10-2018 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 PIRSF PIRSF006641 1 368 1.7E-155 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 368 6.7E-142 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 SUPERFAMILY SSF52540 3 305 5.2E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 Gene3D G3DSA:3.40.50.300 4 283 2.7E-147 T 14-10-2018 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 Pfam PF01926 50S ribosome-binding GTPase 5 128 1.2E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.0E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.0E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.0E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.0E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 Gene3D G3DSA:1.10.150.300 113 203 2.7E-147 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 368 42.706 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 SUPERFAMILY SSF81271 284 365 4.8E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 Pfam PF06071 Protein of unknown function (DUF933) 284 367 6.8E-41 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 JO41_05040 42fb9753b46049a3aa669dc0f078ac6c 368 Gene3D G3DSA:3.10.20.30 48 366 2.7E-147 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 Gene3D G3DSA:1.10.3120.10 123 439 5.7E-65 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 Pfam PF05697 Bacterial trigger factor protein (TF) 9 149 1.5E-32 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 272 436 4.5E-32 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 SUPERFAMILY SSF102735 6 137 4.58E-27 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 Hamap MF_00303 Trigger factor [tig]. 3 441 17.799 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 Gene3D G3DSA:3.10.50.40 157 256 5.7E-65 T 14-10-2018 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 166 241 1.4E-7 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 SUPERFAMILY SSF54534 139 256 2.55E-21 T 14-10-2018 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 PIRSF PIRSF003095 3 455 1.7E-96 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 Gene3D G3DSA:3.30.70.1050 1 122 3.5E-28 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 TIGRFAM TIGR00115 tig: trigger factor 14 434 1.9E-104 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JO41_08415 1219f0874f7a1acd75c0e40c6031a7e0 463 SUPERFAMILY SSF109998 258 442 2.35E-36 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 Pfam PF01012 Electron transfer flavoprotein domain 14 212 2.0E-45 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 SUPERFAMILY SSF52467 238 359 3.65E-43 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 Gene3D G3DSA:3.40.50.1220 236 366 2.1E-51 T 14-10-2018 JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 Gene3D G3DSA:3.40.50.620 10 235 4.2E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 PIRSF PIRSF000089 10 365 5.8E-107 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 SUPERFAMILY SSF52402 12 226 6.28E-49 T 14-10-2018 JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 SMART SM00893 14 227 4.2E-48 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 304 330 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 JO41_08805 56560dc7a63e39025ebed60debf92b5a 367 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 238 323 7.5E-34 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 JO41_03790 f8f70c8c1af1ca109c0a226001b7232e 232 SUPERFAMILY SSF56784 7 226 2.0E-29 T 14-10-2018 IPR036412 HAD-like superfamily JO41_03790 f8f70c8c1af1ca109c0a226001b7232e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 6.6E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_03790 f8f70c8c1af1ca109c0a226001b7232e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 6.6E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_03790 f8f70c8c1af1ca109c0a226001b7232e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 117 130 6.6E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_03790 f8f70c8c1af1ca109c0a226001b7232e 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 201 3.1E-14 T 14-10-2018 JO41_03790 f8f70c8c1af1ca109c0a226001b7232e 232 Gene3D G3DSA:1.10.150.520 23 105 1.3E-25 T 14-10-2018 JO41_03790 f8f70c8c1af1ca109c0a226001b7232e 232 Gene3D G3DSA:3.40.50.1000 11 207 1.3E-25 T 14-10-2018 IPR023214 HAD superfamily JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 26 586 1.6E-151 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 Pfam PF00750 tRNA synthetases class I (R) 107 451 5.9E-52 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 SMART SM01016 6 94 2.1E-16 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 Gene3D G3DSA:1.10.730.10 465 587 1.2E-31 T 14-10-2018 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 Gene3D G3DSA:3.40.50.620 121 464 5.9E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 3.6E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 3.6E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 3.6E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 311 332 3.6E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 Gene3D G3DSA:3.30.1360.70 2 119 4.4E-21 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 SUPERFAMILY SSF47323 460 587 2.75E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 SMART SM00836 466 587 1.3E-39 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 SUPERFAMILY SSF52374 119 460 8.3E-81 T 14-10-2018 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 SUPERFAMILY SSF55190 4 115 6.28E-19 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 143 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 94 1.2E-12 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 Pfam PF05746 DALR anticodon binding domain 466 587 1.3E-27 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JO41_08475 e3d43a8fcdf688948bc03ed70079eeb6 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 587 26.17 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 308 2.5E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 Pfam PF00581 Rhodanese-like domain 470 546 4.4E-9 T 14-10-2018 IPR001763 Rhodanese-like domain JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 SUPERFAMILY SSF52821 439 550 9.82E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 SUPERFAMILY SSF51905 2 198 2.07E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 SUPERFAMILY SSF51905 152 317 8.64E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 SUPERFAMILY SSF55424 326 448 1.01E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.2E-24 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.2E-24 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.2E-24 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 3.2E-24 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 3.2E-24 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 Gene3D G3DSA:3.40.250.10 454 553 7.2E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 SMART SM00450 455 551 1.7E-14 T 14-10-2018 IPR001763 Rhodanese-like domain JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 335 433 5.4E-11 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 Gene3D G3DSA:3.50.50.60 115 443 7.9E-176 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 Gene3D G3DSA:3.50.50.60 3 343 7.9E-176 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 3.5E-16 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 3.5E-16 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 3.5E-16 T 14-10-2018 JO41_12565 e399b65f5a65931d7cc59a0fb655c445 556 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.5E-16 T 14-10-2018 JO41_03795 c8ce066b8c4c2866b5abfa7fe50a6ee6 246 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 47 230 1.3E-41 T 14-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain JO41_03795 c8ce066b8c4c2866b5abfa7fe50a6ee6 246 Gene3D G3DSA:2.160.20.120 29 244 1.4E-53 T 14-10-2018 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 SUPERFAMILY SSF63411 4 250 1.83E-40 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Gene3D G3DSA:3.30.830.10 539 798 1.2E-53 T 14-10-2018 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Gene3D G3DSA:3.30.830.10 800 990 3.9E-35 T 14-10-2018 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Pfam PF00675 Insulinase (Peptidase family M16) 55 141 8.2E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 SUPERFAMILY SSF63411 257 486 3.22E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 SUPERFAMILY SSF63411 532 791 5.68E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 SUPERFAMILY SSF63411 829 971 7.68E-23 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Gene3D G3DSA:3.30.830.10 251 481 1.2E-50 T 14-10-2018 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Pfam PF08367 Peptidase M16C associated 521 733 4.3E-28 T 14-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Gene3D G3DSA:3.30.830.10 1 247 2.1E-76 T 14-10-2018 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 SMART SM01264 460 735 8.5E-26 T 14-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Pfam PF05193 Peptidase M16 inactive domain 753 913 1.8E-5 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JO41_11485 af0b872a70889131bfcc8762f73fbe06 1033 Pfam PF05193 Peptidase M16 inactive domain 199 385 4.2E-13 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JO41_06195 7422417e48d5f682de69b8108287a234 492 Gene3D G3DSA:3.60.60.10 25 226 1.4E-17 T 14-10-2018 JO41_06195 7422417e48d5f682de69b8108287a234 492 Pfam PF03577 Peptidase family C69 25 413 4.5E-91 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 707 729 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 Gene3D G3DSA:3.20.70.20 175 843 2.9E-196 T 14-10-2018 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 245 837 2.8E-186 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 SUPERFAMILY SSF48168 116 319 1.23E-50 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 242 316 3.7E-18 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 Pfam PF02867 Ribonucleotide reductase, barrel domain 321 833 5.7E-149 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 Pfam PF03477 ATP cone domain 1 98 5.3E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 534 545 4.7E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 629 651 4.7E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 657 680 4.7E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 718 745 4.7E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 591 614 4.7E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 396 415 4.7E-44 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_00165 7aa988fd6e4bee0a7324fd073b18176a 849 SUPERFAMILY SSF51998 320 848 8.55E-171 T 14-10-2018 JO41_12485 13ac4608e33d2ce7a1840cd16c4ed758 608 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 382 532 7.5E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_12485 13ac4608e33d2ce7a1840cd16c4ed758 608 SMART SM00283 318 565 3.6E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_12485 13ac4608e33d2ce7a1840cd16c4ed758 608 SUPERFAMILY SSF58104 313 583 6.41E-44 T 14-10-2018 JO41_12485 13ac4608e33d2ce7a1840cd16c4ed758 608 Gene3D G3DSA:1.10.287.950 343 565 5.6E-39 T 14-10-2018 JO41_12485 13ac4608e33d2ce7a1840cd16c4ed758 608 Gene3D G3DSA:1.10.287.950 222 342 1.5E-7 T 14-10-2018 JO41_01055 4be00c4c94b6ef795af16e28e5343715 588 Gene3D G3DSA:3.40.462.40 107 500 5.2E-129 T 14-10-2018 JO41_01055 4be00c4c94b6ef795af16e28e5343715 588 Pfam PF01565 FAD binding domain 126 270 3.0E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JO41_01055 4be00c4c94b6ef795af16e28e5343715 588 Gene3D G3DSA:1.10.45.10 524 563 2.1E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JO41_01055 4be00c4c94b6ef795af16e28e5343715 588 Gene3D G3DSA:3.30.465.40 80 309 5.2E-129 T 14-10-2018 JO41_01055 4be00c4c94b6ef795af16e28e5343715 588 Pfam PF02913 FAD linked oxidases, C-terminal domain 311 561 1.1E-32 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JO41_01055 4be00c4c94b6ef795af16e28e5343715 588 SUPERFAMILY SSF55103 287 561 2.51E-31 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JO41_01055 4be00c4c94b6ef795af16e28e5343715 588 SUPERFAMILY SSF56176 76 306 5.61E-45 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 318 3.0E-17 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 PIRSF PIRSF005499 1 698 3.1E-301 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SUPERFAMILY SSF55666 448 546 2.36E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Gene3D G3DSA:3.30.1370.10 548 619 4.9E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SUPERFAMILY SSF54211 290 486 9.62E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SUPERFAMILY SSF55666 143 233 4.19E-31 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SUPERFAMILY SSF54211 5 142 1.97E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SMART SM00316 618 688 2.7E-23 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Pfam PF01138 3' exoribonuclease family, domain 1 323 454 9.4E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Pfam PF01138 3' exoribonuclease family, domain 1 14 142 1.9E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 687 4.7E-299 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Gene3D G3DSA:2.40.50.140 620 690 1.1E-25 T 14-10-2018 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Pfam PF03725 3' exoribonuclease family, domain 2 458 527 5.5E-6 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 1.7E-14 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SUPERFAMILY SSF50249 618 694 1.34E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Pfam PF00575 S1 RNA binding domain 617 686 4.3E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Gene3D G3DSA:3.30.230.70 1 228 4.6E-78 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 691 29.761 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SMART SM00322 550 615 6.2E-12 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Pfam PF00013 KH domain 554 610 9.8E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 Gene3D G3DSA:3.30.230.70 236 547 2.3E-114 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JO41_09065 8333ba35fc120ffd2e2d38c26093aaa7 698 SUPERFAMILY SSF54791 552 638 3.15E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 SUPERFAMILY SSF52540 324 562 5.22E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 Pfam PF00005 ABC transporter 346 492 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 Gene3D G3DSA:3.40.50.300 322 571 2.8E-87 T 14-10-2018 JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 Pfam PF00664 ABC transporter transmembrane region 24 267 2.8E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 SUPERFAMILY SSF90123 18 318 5.62E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 Gene3D G3DSA:1.20.1560.10 2 321 5.1E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_11720 1ac057e656cc9b553f2ae2b208fec341 572 SMART SM00382 354 540 1.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 619 6.6E-23 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Pfam PF05000 RNA polymerase Rpb1, domain 4 648 720 6.9E-16 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Gene3D G3DSA:2.40.50.100 1153 1216 1.9E-63 T 14-10-2018 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Gene3D G3DSA:1.10.1790.20 1137 1315 1.9E-63 T 14-10-2018 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 SMART SM00663 224 503 8.3E-171 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1368 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Gene3D G3DSA:2.40.50.100 1036 1128 1.5E-22 T 14-10-2018 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 8.8E-90 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Pfam PF04998 RNA polymerase Rpb1, domain 5 730 1316 4.4E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Gene3D G3DSA:1.10.40.90 363 405 1.4E-17 T 14-10-2018 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Gene3D G3DSA:1.10.274.100 479 546 4.6E-18 T 14-10-2018 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Gene3D G3DSA:1.10.132.30 613 754 3.3E-61 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 SUPERFAMILY SSF64484 6 1368 0.0 T 14-10-2018 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Gene3D G3DSA:1.10.150.390 1317 1379 3.5E-29 T 14-10-2018 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1378 19.005 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Pfam PF00623 RNA polymerase Rpb1, domain 2 390 474 1.8E-25 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_01785 163ae75a170f77daeecb804bebd3ddb7 1443 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 385 1.1E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04145 7cbd6e4da0decc6c93c46cc6ff2a219d 323 Pfam PF02661 Fic/DOC family 101 196 1.3E-20 T 14-10-2018 IPR003812 Fido domain JO41_04145 7cbd6e4da0decc6c93c46cc6ff2a219d 323 Pfam PF13412 Winged helix-turn-helix DNA-binding 261 307 5.0E-10 T 14-10-2018 JO41_04145 7cbd6e4da0decc6c93c46cc6ff2a219d 323 SUPERFAMILY SSF140931 79 249 5.62E-41 T 14-10-2018 IPR036597 Fido-like domain superfamily JO41_04145 7cbd6e4da0decc6c93c46cc6ff2a219d 323 Gene3D G3DSA:1.10.10.10 260 322 4.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_04145 7cbd6e4da0decc6c93c46cc6ff2a219d 323 SUPERFAMILY SSF46785 261 318 4.12E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_04145 7cbd6e4da0decc6c93c46cc6ff2a219d 323 Gene3D G3DSA:1.10.3290.10 12 259 5.4E-52 T 14-10-2018 IPR036597 Fido-like domain superfamily JO41_00885 493a8a71a6e3a81aef12e155ab478007 230 Gene3D G3DSA:3.30.70.1450 140 229 4.8E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_00885 493a8a71a6e3a81aef12e155ab478007 230 SUPERFAMILY SSF51735 6 137 6.29E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_00885 493a8a71a6e3a81aef12e155ab478007 230 SUPERFAMILY SSF116726 135 229 5.49E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_00885 493a8a71a6e3a81aef12e155ab478007 230 Gene3D G3DSA:3.40.50.720 3 139 8.4E-29 T 14-10-2018 JO41_00885 493a8a71a6e3a81aef12e155ab478007 230 Pfam PF02080 TrkA-C domain 160 229 1.8E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO41_00885 493a8a71a6e3a81aef12e155ab478007 230 Pfam PF02254 TrkA-N domain 7 120 7.4E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO41_04360 79fd218c3a3d67a1f1ee40ad0b7f8c5c 127 PIRSF PIRSF002131 1 127 1.4E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JO41_04360 79fd218c3a3d67a1f1ee40ad0b7f8c5c 127 Gene3D G3DSA:3.30.420.80 1 127 1.7E-51 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04360 79fd218c3a3d67a1f1ee40ad0b7f8c5c 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site JO41_04360 79fd218c3a3d67a1f1ee40ad0b7f8c5c 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 123 2.0E-54 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04360 79fd218c3a3d67a1f1ee40ad0b7f8c5c 127 Pfam PF00411 Ribosomal protein S11 17 126 7.4E-44 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JO41_04360 79fd218c3a3d67a1f1ee40ad0b7f8c5c 127 SUPERFAMILY SSF53137 13 127 1.93E-45 T 14-10-2018 JO41_04360 79fd218c3a3d67a1f1ee40ad0b7f8c5c 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 127 31.473 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JO41_12650 684205b8ab6ad40cca0acdeaf14d9317 133 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 122 2.0E-26 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO41_12650 684205b8ab6ad40cca0acdeaf14d9317 133 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 123 8.6E-23 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO41_12650 684205b8ab6ad40cca0acdeaf14d9317 133 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 123 22.207 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO41_12650 684205b8ab6ad40cca0acdeaf14d9317 133 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 110 8.6E-18 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO41_12650 684205b8ab6ad40cca0acdeaf14d9317 133 SUPERFAMILY SSF56214 1 122 4.45E-28 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO41_12650 684205b8ab6ad40cca0acdeaf14d9317 133 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 123 2.4E-23 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JO41_12650 684205b8ab6ad40cca0acdeaf14d9317 133 Gene3D G3DSA:3.90.470.20 1 123 5.0E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO41_05470 becc403ada503bdff90a4f5175b54bc0 248 SUPERFAMILY SSF116734 71 239 9.97E-23 T 14-10-2018 JO41_05470 becc403ada503bdff90a4f5175b54bc0 248 Gene3D G3DSA:3.90.220.20 59 212 5.0E-22 T 14-10-2018 JO41_05470 becc403ada503bdff90a4f5175b54bc0 248 Pfam PF01420 Type I restriction modification DNA specificity domain 72 222 2.0E-9 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO41_09260 379e214e5aeca311f4386d7f0547a646 633 SUPERFAMILY SSF51445 70 534 1.92E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_09260 379e214e5aeca311f4386d7f0547a646 633 Gene3D G3DSA:2.60.40.10 1 135 1.9E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_09260 379e214e5aeca311f4386d7f0547a646 633 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 112 1.1E-17 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 JO41_09260 379e214e5aeca311f4386d7f0547a646 633 SMART SM00642 150 528 6.0E-95 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_09260 379e214e5aeca311f4386d7f0547a646 633 Gene3D G3DSA:3.20.20.80 146 528 5.6E-125 T 14-10-2018 JO41_09260 379e214e5aeca311f4386d7f0547a646 633 Pfam PF00128 Alpha amylase, catalytic domain 185 498 2.8E-69 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_09260 379e214e5aeca311f4386d7f0547a646 633 Gene3D G3DSA:3.90.400.10 258 328 5.6E-125 T 14-10-2018 JO41_09260 379e214e5aeca311f4386d7f0547a646 633 SUPERFAMILY SSF81296 1 108 6.58E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set JO41_10165 1639d72f4fcec4be484105ee901450b6 228 TIGRFAM TIGR02076 pyrH_arch: putative uridylate kinase 4 227 1.1E-52 T 14-10-2018 IPR011818 Uridylate kinase, archaeal/spirochete, putative GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 JO41_10165 1639d72f4fcec4be484105ee901450b6 228 PIRSF PIRSF005650 1 228 2.6E-49 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 JO41_10165 1639d72f4fcec4be484105ee901450b6 228 Pfam PF00696 Amino acid kinase family 1 204 3.1E-25 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JO41_10165 1639d72f4fcec4be484105ee901450b6 228 SUPERFAMILY SSF53633 2 227 1.28E-32 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO41_10165 1639d72f4fcec4be484105ee901450b6 228 Gene3D G3DSA:3.40.1160.10 4 227 2.0E-44 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 SMART SM00100 178 296 1.5E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 SMART SM00100 1 110 0.16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 Pfam PF00027 Cyclic nucleotide-binding domain 7 95 3.8E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 Pfam PF00027 Cyclic nucleotide-binding domain 197 283 6.5E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 245 262 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 Gene3D G3DSA:2.60.120.10 189 309 1.3E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 SUPERFAMILY SSF51206 3 117 3.01E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 SUPERFAMILY SSF51206 196 307 9.3E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_10130 18f04b5ca30909e8582b2898d68d6956 420 Gene3D G3DSA:2.60.120.10 1 123 3.0E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_04425 defce618eac49858cdc706aad446717b 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 13 82 5.0E-22 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04425 defce618eac49858cdc706aad446717b 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 87 22.878 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04425 defce618eac49858cdc706aad446717b 90 Gene3D G3DSA:2.40.50.140 12 90 7.9E-32 T 14-10-2018 JO41_04425 defce618eac49858cdc706aad446717b 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 13 82 1.5E-32 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04425 defce618eac49858cdc706aad446717b 90 SUPERFAMILY SSF50249 12 89 1.76E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_04425 defce618eac49858cdc706aad446717b 90 PRINTS PR00973 Ribosomal protein S17 family signature 73 80 1.6E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04425 defce618eac49858cdc706aad446717b 90 PRINTS PR00973 Ribosomal protein S17 family signature 63 73 1.6E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04425 defce618eac49858cdc706aad446717b 90 PRINTS PR00973 Ribosomal protein S17 family signature 31 54 1.6E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04425 defce618eac49858cdc706aad446717b 90 Pfam PF00366 Ribosomal protein S17 17 83 1.9E-29 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04425 defce618eac49858cdc706aad446717b 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 63 75 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_00275 28dd5aa370f21e64d6a5da668d94e8d9 654 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 647 1.6E-213 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ JO41_00275 28dd5aa370f21e64d6a5da668d94e8d9 654 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 573 4.4E-92 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JO41_04480 be6cea4d5b10689390a978e908d24b63 395 SUPERFAMILY SSF52540 9 227 4.5E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04480 be6cea4d5b10689390a978e908d24b63 395 Gene3D G3DSA:2.40.30.10 209 301 6.1E-38 T 14-10-2018 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 4.3E-30 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JO41_04480 be6cea4d5b10689390a978e908d24b63 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 57.318 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.8E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.8E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.8E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.8E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.8E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 SUPERFAMILY SSF50465 299 394 3.17E-33 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JO41_04480 be6cea4d5b10689390a978e908d24b63 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JO41_04480 be6cea4d5b10689390a978e908d24b63 395 Pfam PF03144 Elongation factor Tu domain 2 226 294 2.1E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 Gene3D G3DSA:2.40.30.10 302 394 6.2E-38 T 14-10-2018 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 Gene3D G3DSA:3.40.50.300 1 204 8.2E-64 T 14-10-2018 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 Pfam PF00009 Elongation factor Tu GTP binding domain 11 201 2.8E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.3E-206 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JO41_04480 be6cea4d5b10689390a978e908d24b63 395 SUPERFAMILY SSF50447 206 302 8.94E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_04480 be6cea4d5b10689390a978e908d24b63 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 1.8E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 Pfam PF03129 Anticodon binding domain 354 441 3.4E-22 T 14-10-2018 IPR004154 Anticodon-binding JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 27 41 3.6E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 147 164 3.6E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 196 206 3.6E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 304 316 3.6E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 179 196 3.6E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 390 409 3.6E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 PRINTS PR01043 Glycyl-tRNA synthetase signature 126 138 3.6E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 SUPERFAMILY SSF52954 340 446 1.37E-33 T 14-10-2018 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 Gene3D G3DSA:3.30.930.10 8 350 2.0E-130 T 14-10-2018 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 7 228 5.2E-90 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 Gene3D G3DSA:3.40.50.800 351 449 1.8E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 SUPERFAMILY SSF55681 7 356 6.33E-118 T 14-10-2018 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 140 320 2.8E-10 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_05065 5708a1fda76446a0db1aa4d9c8fa5845 450 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 5 445 51.284 T 14-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 SUPERFAMILY SSF51230 557 629 7.46E-15 T 14-10-2018 IPR011053 Single hybrid motif JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 Pfam PF00682 HMGL-like 4 270 2.0E-49 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 Pfam PF02436 Conserved carboxylase domain 292 482 5.9E-53 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 SUPERFAMILY SSF89000 297 453 1.61E-48 T 14-10-2018 JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 526 1.3E-236 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 SUPERFAMILY SSF51569 2 299 1.47E-89 T 14-10-2018 JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 Pfam PF00364 Biotin-requiring enzyme 567 629 9.1E-12 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 Gene3D G3DSA:3.20.20.70 1 454 8.7E-163 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_03910 c4d8ac8961305bc2a2917400036a24a3 630 Gene3D G3DSA:2.40.50.100 562 630 2.3E-20 T 14-10-2018 JO41_11880 df06c80d8113c9300bcb49f206eb2711 344 Pfam PF01212 Beta-eliminating lyase 5 286 1.3E-88 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JO41_11880 df06c80d8113c9300bcb49f206eb2711 344 PIRSF PIRSF017617 1 344 3.7E-128 T 14-10-2018 IPR023603 Threonine aldolase JO41_11880 df06c80d8113c9300bcb49f206eb2711 344 Gene3D G3DSA:3.40.640.10 1 247 2.8E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_11880 df06c80d8113c9300bcb49f206eb2711 344 Gene3D G3DSA:3.90.1150.10 248 344 5.2E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_11880 df06c80d8113c9300bcb49f206eb2711 344 SUPERFAMILY SSF53383 3 343 2.79E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 310 34.35 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 Gene3D G3DSA:1.10.150.170 111 216 5.8E-90 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 Gene3D G3DSA:3.40.50.150 5 306 5.8E-90 T 14-10-2018 JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 7.8E-97 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 PIRSF PIRSF004486 1 311 4.5E-108 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 SUPERFAMILY SSF53335 5 310 9.62E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 Pfam PF01795 MraW methylase family 2 309 1.8E-115 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JO41_01155 fd6915cd4f689703b43ecb73a5fa6bd2 315 SUPERFAMILY SSF81799 113 214 9.94E-33 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JO41_00385 a1bb80cfdae9f749128ae6d298889ca7 425 SUPERFAMILY SSF53850 30 416 6.92E-78 T 14-10-2018 JO41_00385 a1bb80cfdae9f749128ae6d298889ca7 425 Pfam PF13416 Bacterial extracellular solute-binding protein 54 356 1.5E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_00385 a1bb80cfdae9f749128ae6d298889ca7 425 Gene3D G3DSA:3.40.190.10 53 360 1.9E-78 T 14-10-2018 JO41_00385 a1bb80cfdae9f749128ae6d298889ca7 425 Gene3D G3DSA:3.40.190.10 149 409 1.9E-78 T 14-10-2018 JO41_06365 2b4f35a192faa3e743d6d7f77114b9bc 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 270 3.6E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_06365 2b4f35a192faa3e743d6d7f77114b9bc 282 Gene3D G3DSA:1.10.3720.10 2 271 7.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily JO41_06365 2b4f35a192faa3e743d6d7f77114b9bc 282 SUPERFAMILY SSF161098 12 273 2.62E-60 T 14-10-2018 IPR035906 MetI-like superfamily JO41_02940 a8194c71070d97cd181d5b6a319bf484 540 Pfam PF09820 Predicted AAA-ATPase 8 296 5.9E-99 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO41_02940 a8194c71070d97cd181d5b6a319bf484 540 SUPERFAMILY SSF52540 32 211 4.41E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02940 a8194c71070d97cd181d5b6a319bf484 540 Gene3D G3DSA:3.40.50.300 22 224 3.1E-6 T 14-10-2018 JO41_02940 a8194c71070d97cd181d5b6a319bf484 540 Pfam PF08011 PD-(D/E)XK nuclease superfamily 442 535 2.7E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO41_06830 73e6323c9d5f6aaa4f09680d3b3becd8 142 Gene3D G3DSA:3.90.1180.10 1 142 2.1E-56 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_06830 73e6323c9d5f6aaa4f09680d3b3becd8 142 SUPERFAMILY SSF52161 1 139 1.1E-52 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_06830 73e6323c9d5f6aaa4f09680d3b3becd8 142 PIRSF PIRSF002181 1 141 5.3E-44 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JO41_06830 73e6323c9d5f6aaa4f09680d3b3becd8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 26.745 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JO41_06830 73e6323c9d5f6aaa4f09680d3b3becd8 142 Pfam PF00572 Ribosomal protein L13 15 137 1.2E-50 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JO41_06830 73e6323c9d5f6aaa4f09680d3b3becd8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 JO41_06830 73e6323c9d5f6aaa4f09680d3b3becd8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 139 2.6E-59 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_02955 0612148296d6fb5c4e829e98763e9e51 366 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 336 5.4E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 Gene3D G3DSA:3.60.110.10 1 309 6.6E-30 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 Gene3D G3DSA:3.40.50.620 327 552 3.6E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 TIGRFAM TIGR00552 nadE: NAD+ synthetase 352 524 2.3E-23 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 SUPERFAMILY SSF52402 347 640 4.85E-64 T 14-10-2018 JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 PIRSF PIRSF006630 6 663 1.3E-90 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 Gene3D G3DSA:1.10.10.1140 567 671 1.9E-38 T 14-10-2018 JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 Pfam PF02540 NAD synthase 357 529 1.2E-26 T 14-10-2018 IPR022310 NAD/GMP synthase JO41_10225 c6049d96ddbe33196df0772cc31c5760 672 SUPERFAMILY SSF56317 7 264 1.47E-13 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO41_00300 b537cef51e0a9182bd6329d3128c8571 441 Pfam PF01547 Bacterial extracellular solute-binding protein 55 356 2.1E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_00300 b537cef51e0a9182bd6329d3128c8571 441 SUPERFAMILY SSF53850 25 440 1.63E-45 T 14-10-2018 JO41_00300 b537cef51e0a9182bd6329d3128c8571 441 Gene3D G3DSA:3.40.190.10 26 439 1.3E-47 T 14-10-2018 JO41_06030 78f8b12f9953b05a4afe1c5b2396a5bb 795 Pfam PF01136 Peptidase family U32 73 292 7.8E-79 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 SUPERFAMILY SSF88659 167 256 4.67E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 31 255 2.2E-86 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 Gene3D G3DSA:1.10.1740.10 16 100 1.2E-31 T 14-10-2018 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 254 2.7E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 PIRSF PIRSF000770 10 261 1.9E-56 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 PRINTS PR00046 Major sigma-70 factor signature 239 250 8.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 PRINTS PR00046 Major sigma-70 factor signature 57 70 8.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 PRINTS PR00046 Major sigma-70 factor signature 81 89 8.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 PRINTS PR00046 Major sigma-70 factor signature 207 219 8.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 PRINTS PR00046 Major sigma-70 factor signature 224 239 8.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 Pfam PF04545 Sigma-70, region 4 203 251 2.4E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 SUPERFAMILY SSF88946 10 102 3.77E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 Pfam PF04539 Sigma-70 region 3 111 182 1.0E-8 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 Gene3D G3DSA:1.20.140.160 101 257 2.7E-48 T 14-10-2018 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 Pfam PF04542 Sigma-70 region 2 32 102 5.1E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO41_07130 0225ecb86cc7fe8e94c126e92cb45e5a 262 SUPERFAMILY SSF88659 103 174 3.18E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_02140 71d837f7363e647c81da84e38d303902 242 Pfam PF08401 Domain of unknown function (DUF1738) 28 130 7.4E-10 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 JO41_09660 970d28e57b7d2a575a4305699c8fed2d 432 Pfam PF03239 Iron permease FTR1 family 46 334 4.2E-42 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 JO41_08570 0cf142d45436713dea9d398b7c4b767e 286 Pfam PF04556 DpnII restriction endonuclease 4 282 4.7E-114 T 14-10-2018 IPR007637 Restriction endonuclease, type II, DpmII-like GO:0003677|GO:0009036|GO:0009307 JO41_08570 0cf142d45436713dea9d398b7c4b767e 286 PIRSF PIRSF016080 1 286 3.3E-105 T 14-10-2018 IPR021191 Restriction endonuclease, type II, DpmII GO:0003677|GO:0009036|GO:0009307 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 838 895 5.9E-12 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 882 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Gene3D G3DSA:1.10.730.10 10 762 0.0 T 14-10-2018 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 SUPERFAMILY SSF50677 199 357 3.14E-60 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Gene3D G3DSA:1.10.287.380 831 899 2.2E-11 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 PRINTS PR00986 Valyl-tRNA synthetase signature 459 480 2.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 PRINTS PR00986 Valyl-tRNA synthetase signature 490 508 2.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 PRINTS PR00986 Valyl-tRNA synthetase signature 45 56 2.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 PRINTS PR00986 Valyl-tRNA synthetase signature 245 262 2.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 PRINTS PR00986 Valyl-tRNA synthetase signature 361 374 2.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 577 1.9E-206 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Gene3D G3DSA:3.90.740.10 184 358 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 63 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Gene3D G3DSA:3.40.50.620 30 539 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Hamap MF_02004 Valine--tRNA ligase [valS]. 10 900 15.47 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 SUPERFAMILY SSF52374 8 583 1.1E-143 T 14-10-2018 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 SUPERFAMILY SSF47323 590 849 7.48E-55 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 Pfam PF08264 Anticodon-binding domain of tRNA 620 775 2.8E-37 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JO41_09575 c9d667b3ee5eab44921e9800735012a8 900 SUPERFAMILY SSF46589 835 898 6.28E-12 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 146 183 7.5E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 SUPERFAMILY SSF52374 146 327 2.55E-18 T 14-10-2018 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 11 328 5.7E-83 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 Gene3D G3DSA:3.40.630.30 2 118 5.4E-6 T 14-10-2018 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 Gene3D G3DSA:3.40.50.620 145 320 1.8E-14 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 Pfam PF08218 Citrate lyase ligase C-terminal domain 146 326 1.8E-68 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 110 327 8.0E-52 T 14-10-2018 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 SMART SM00764 146 326 4.6E-98 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 PIRSF PIRSF005751 1 344 4.7E-112 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 JO41_07085 c54d7d2064d02e76baaccc87bf461a8f 347 SUPERFAMILY SSF55729 18 114 3.54E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_00305 2246787b2bde915ace1e01193d544023 377 Gene3D G3DSA:3.20.20.105 2 377 9.8E-152 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO41_00305 2246787b2bde915ace1e01193d544023 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 12 373 9.4E-143 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO41_00305 2246787b2bde915ace1e01193d544023 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 135 369 1.7E-77 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO41_00305 2246787b2bde915ace1e01193d544023 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 372 51.172 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO41_00305 2246787b2bde915ace1e01193d544023 377 SUPERFAMILY SSF51713 8 373 6.67E-144 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO41_00305 2246787b2bde915ace1e01193d544023 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 18 373 1.6E-150 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 JO41_11820 29ebaf0aba399a0a8d37fb98b045c30a 390 Pfam PF00266 Aminotransferase class-V 2 378 6.2E-50 T 14-10-2018 IPR000192 Aminotransferase class V domain JO41_11820 29ebaf0aba399a0a8d37fb98b045c30a 390 Gene3D G3DSA:3.90.1150.10 2 382 3.6E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_11820 29ebaf0aba399a0a8d37fb98b045c30a 390 PIRSF PIRSF005572 1 390 3.0E-100 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JO41_11820 29ebaf0aba399a0a8d37fb98b045c30a 390 Gene3D G3DSA:1.10.260.50 14 279 3.6E-101 T 14-10-2018 JO41_11820 29ebaf0aba399a0a8d37fb98b045c30a 390 SUPERFAMILY SSF53383 1 388 2.78E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_11820 29ebaf0aba399a0a8d37fb98b045c30a 390 Gene3D G3DSA:3.40.640.10 59 235 3.6E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 2.5E-22 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.5E-22 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 296 2.5E-22 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.5E-22 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 262 2.5E-22 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 Gene3D G3DSA:3.50.50.60 120 254 2.8E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 Gene3D G3DSA:3.50.50.60 4 297 2.8E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 SUPERFAMILY SSF51905 2 332 2.74E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 261 1.0E-16 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.0E-16 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 1.0E-16 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 289 296 1.0E-16 T 14-10-2018 JO41_08605 cdd0d3c9f6de3c34f21786a8bfa06eab 415 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 296 1.6E-32 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 359 549 2.9E-34 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 Pfam PF01590 GAF domain 165 292 2.5E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 SUPERFAMILY SSF81606 341 549 7.32E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 SMART SM00065 140 305 3.9E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 SUPERFAMILY SSF55781 127 319 4.14E-17 T 14-10-2018 JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 Gene3D G3DSA:3.30.450.40 125 297 3.2E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 SMART SM00331 332 549 1.3E-27 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_11840 a9dee856f2f19a0033aaafb3444de95c 550 Gene3D G3DSA:3.60.40.10 302 549 7.7E-48 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 Gene3D G3DSA:1.25.40.10 108 221 3.1E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 SUPERFAMILY SSF48452 3 209 1.9E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 Gene3D G3DSA:1.25.40.10 1 107 2.1E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 SMART SM00028 176 209 290.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 SMART SM00028 36 69 42.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 SMART SM00028 1 34 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 SMART SM00028 107 140 9.1E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 SMART SM00028 141 175 29.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 Pfam PF13174 Tetratricopeptide repeat 40 64 0.013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00830 9154147a7305fd822545ba1c52e19ce8 222 Pfam PF13432 Tetratricopeptide repeat 113 176 3.5E-11 T 14-10-2018 JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 Gene3D G3DSA:3.40.50.300 1 245 4.9E-60 T 14-10-2018 JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 Pfam PF00005 ABC transporter 280 416 7.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 Pfam PF00005 ABC transporter 21 170 8.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 SUPERFAMILY SSF52540 254 467 1.12E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 SMART SM00382 288 464 5.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 SMART SM00382 29 219 9.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 Gene3D G3DSA:3.40.50.300 251 480 2.0E-51 T 14-10-2018 JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11645 98794d36451ebc7e9b56a2b7361256d2 486 SUPERFAMILY SSF52540 2 233 1.52E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00625 85993384532f50fad06dfcb5529343f5 441 Pfam PF01739 CheR methyltransferase, SAM binding domain 259 433 1.0E-41 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JO41_00625 85993384532f50fad06dfcb5529343f5 441 SUPERFAMILY SSF53335 259 433 9.71E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_00625 85993384532f50fad06dfcb5529343f5 441 PRINTS PR00996 Glutamate methyltransferase family signature 379 393 2.1E-9 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_00625 85993384532f50fad06dfcb5529343f5 441 PRINTS PR00996 Glutamate methyltransferase family signature 398 421 2.1E-9 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_00625 85993384532f50fad06dfcb5529343f5 441 PRINTS PR00996 Glutamate methyltransferase family signature 251 263 2.1E-9 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_00625 85993384532f50fad06dfcb5529343f5 441 PRINTS PR00996 Glutamate methyltransferase family signature 284 304 2.1E-9 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_00625 85993384532f50fad06dfcb5529343f5 441 Gene3D G3DSA:2.40.50.180 41 158 3.0E-36 T 14-10-2018 JO41_00625 85993384532f50fad06dfcb5529343f5 441 SMART SM00138 196 439 4.6E-25 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_00625 85993384532f50fad06dfcb5529343f5 441 SUPERFAMILY SSF50341 17 161 1.96E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JO41_00625 85993384532f50fad06dfcb5529343f5 441 SMART SM00260 20 159 1.7E-42 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO41_00625 85993384532f50fad06dfcb5529343f5 441 Gene3D G3DSA:2.30.30.40 26 153 3.0E-36 T 14-10-2018 JO41_00625 85993384532f50fad06dfcb5529343f5 441 Gene3D G3DSA:3.40.50.150 258 439 1.1E-25 T 14-10-2018 JO41_00625 85993384532f50fad06dfcb5529343f5 441 Pfam PF01584 CheW-like domain 25 161 3.7E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 PIRSF PIRSF000429 1 402 1.7E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 Gene3D G3DSA:3.40.47.10 128 400 6.6E-148 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 Gene3D G3DSA:3.40.47.10 8 278 6.6E-148 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 401 5.6E-140 T 14-10-2018 IPR002155 Thiolase GO:0016747 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 Pfam PF02803 Thiolase, C-terminal domain 272 401 5.4E-42 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 SUPERFAMILY SSF53901 7 272 4.01E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 SUPERFAMILY SSF53901 273 401 1.76E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_10320 8bf70325dd30f0eb508c3e33b5173c39 402 Pfam PF00108 Thiolase, N-terminal domain 7 264 9.6E-99 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JO41_01830 7e12d89e187dbff7aa6ac255b0983f9e 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01830 7e12d89e187dbff7aa6ac255b0983f9e 56 Gene3D G3DSA:2.20.28.120 1 55 2.9E-22 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01830 7e12d89e187dbff7aa6ac255b0983f9e 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 9.3E-26 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01830 7e12d89e187dbff7aa6ac255b0983f9e 56 SUPERFAMILY SSF57829 4 54 2.38E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JO41_01830 7e12d89e187dbff7aa6ac255b0983f9e 56 Pfam PF00471 Ribosomal protein L33 9 54 7.9E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01830 7e12d89e187dbff7aa6ac255b0983f9e 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 17.808 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11125 240f8e67283fb6efeb07e9a389b282dd 188 Gene3D G3DSA:2.60.120.10 5 175 9.7E-31 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_11125 240f8e67283fb6efeb07e9a389b282dd 188 SMART SM00100 20 141 2.4E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_11125 240f8e67283fb6efeb07e9a389b282dd 188 SUPERFAMILY SSF51206 9 146 5.76E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_11125 240f8e67283fb6efeb07e9a389b282dd 188 Pfam PF00027 Cyclic nucleotide-binding domain 41 124 1.8E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_02680 f66017c6de0f1b386395f40063d9f0ae 457 Gene3D G3DSA:3.30.930.10 1 335 1.8E-104 T 14-10-2018 JO41_02680 f66017c6de0f1b386395f40063d9f0ae 457 Pfam PF13393 Histidyl-tRNA synthetase 12 327 1.5E-48 T 14-10-2018 JO41_02680 f66017c6de0f1b386395f40063d9f0ae 457 Gene3D G3DSA:3.40.50.800 347 455 3.7E-5 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO41_02680 f66017c6de0f1b386395f40063d9f0ae 457 PIRSF PIRSF001549 3 419 2.1E-120 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 JO41_02680 f66017c6de0f1b386395f40063d9f0ae 457 SUPERFAMILY SSF55681 7 331 4.58E-77 T 14-10-2018 JO41_02680 f66017c6de0f1b386395f40063d9f0ae 457 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 9 401 1.3E-110 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JO41_02680 f66017c6de0f1b386395f40063d9f0ae 457 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 5 454 25.407 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JO41_02225 2c4e8b545221d77280a9b450b1bb000b 827 Gene3D G3DSA:3.40.50.300 421 550 9.1E-7 T 14-10-2018 JO41_02225 2c4e8b545221d77280a9b450b1bb000b 827 Gene3D G3DSA:3.40.50.300 585 777 1.1E-18 T 14-10-2018 JO41_02225 2c4e8b545221d77280a9b450b1bb000b 827 SMART SM00382 441 720 7.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02225 2c4e8b545221d77280a9b450b1bb000b 827 SUPERFAMILY SSF52540 430 744 3.19E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02225 2c4e8b545221d77280a9b450b1bb000b 827 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 174 384 3.8E-13 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 JO41_02250 ac34332281c0ddebc3ff7f45102ce8b9 318 Gene3D G3DSA:3.40.50.300 120 316 3.0E-38 T 14-10-2018 JO41_02250 ac34332281c0ddebc3ff7f45102ce8b9 318 Pfam PF00437 Type II/IV secretion system protein 21 268 3.8E-53 T 14-10-2018 IPR001482 Type II/IV secretion system protein JO41_02250 ac34332281c0ddebc3ff7f45102ce8b9 318 SUPERFAMILY SSF52540 13 272 7.8E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02250 ac34332281c0ddebc3ff7f45102ce8b9 318 Gene3D G3DSA:3.30.450.90 15 119 2.7E-11 T 14-10-2018 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 Pfam PF02743 Cache domain 48 295 3.1E-30 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 Gene3D G3DSA:3.30.450.20 209 304 6.4E-28 T 14-10-2018 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 SMART SM00304 333 385 5.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 Gene3D G3DSA:1.10.287.950 335 448 1.7E-8 T 14-10-2018 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 Gene3D G3DSA:1.10.287.950 454 671 2.1E-39 T 14-10-2018 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 Gene3D G3DSA:3.30.450.20 111 208 6.4E-28 T 14-10-2018 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 SUPERFAMILY SSF58104 353 450 1.2E-8 T 14-10-2018 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 SUPERFAMILY SSF58104 441 681 1.44E-42 T 14-10-2018 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 500 646 3.0E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 SMART SM00283 428 675 2.6E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 603 632 9.7E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 526 553 9.7E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 555 584 9.7E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_07675 74de52e2fc21d5ef31da7d9c40782abf 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 9.7E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11775 a991098646f6f0082762227a586c36e0 187 SUPERFAMILY SSF55658 1 57 5.76E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JO41_11775 a991098646f6f0082762227a586c36e0 187 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.3E-19 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal JO41_11775 a991098646f6f0082762227a586c36e0 187 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11775 a991098646f6f0082762227a586c36e0 187 SUPERFAMILY SSF55653 62 147 1.28E-19 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JO41_11775 a991098646f6f0082762227a586c36e0 187 Gene3D G3DSA:3.10.430.100 63 148 1.8E-19 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JO41_11775 a991098646f6f0082762227a586c36e0 187 Gene3D G3DSA:3.40.5.10 1 62 2.0E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11775 a991098646f6f0082762227a586c36e0 187 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 4.4E-43 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11775 a991098646f6f0082762227a586c36e0 187 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.3E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11775 a991098646f6f0082762227a586c36e0 187 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 22.972 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 Pfam PF12161 HsdM N-terminal domain 12 159 8.1E-16 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 Pfam PF02384 N-6 DNA Methylase 173 483 8.9E-111 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 Gene3D G3DSA:3.40.50.150 195 477 1.7E-80 T 14-10-2018 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 197 213 5.1E-22 T 14-10-2018 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 334 358 5.1E-22 T 14-10-2018 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 223 237 5.1E-22 T 14-10-2018 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 308 5.1E-22 T 14-10-2018 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 505 1.2E-193 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 Gene3D G3DSA:1.20.1260.30 4 191 3.1E-48 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JO41_06785 98c7706b75d0055de6a6b6fcd268c4b5 517 SUPERFAMILY SSF53335 12 516 1.32E-122 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_03710 b06ec58b94997afb2f90b88f2bc27de4 275 SUPERFAMILY SSF53167 4 273 3.93E-85 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JO41_03710 b06ec58b94997afb2f90b88f2bc27de4 275 Gene3D G3DSA:3.40.50.1580 2 271 1.8E-94 T 14-10-2018 JO41_03710 b06ec58b94997afb2f90b88f2bc27de4 275 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 23 266 7.2E-90 T 14-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 JO41_03710 b06ec58b94997afb2f90b88f2bc27de4 275 Pfam PF01048 Phosphorylase superfamily 23 267 9.2E-43 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JO41_03710 b06ec58b94997afb2f90b88f2bc27de4 275 PIRSF PIRSF000477 1 272 1.2E-91 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 JO41_03710 b06ec58b94997afb2f90b88f2bc27de4 275 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 23 267 4.0E-90 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 Pfam PF01546 Peptidase family M20/M25/M40 136 399 6.6E-13 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 PIRSF PIRSF037215 1 402 8.5E-180 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 SUPERFAMILY SSF53187 2 400 2.49E-75 T 14-10-2018 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 Gene3D G3DSA:3.40.630.10 4 396 7.7E-170 T 14-10-2018 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 Pfam PF07687 Peptidase dimerisation domain 203 297 2.4E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 135 174 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 Gene3D G3DSA:3.30.70.360 206 315 7.7E-170 T 14-10-2018 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 TIGRFAM TIGR01882 peptidase-T: peptidase T 4 399 2.2E-161 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JO41_07930 bac3c8bd33043a5e82d21e05a6c78a48 402 SUPERFAMILY SSF55031 206 316 4.08E-33 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 132 149 4.3E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 4.3E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 4.3E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 40 62 4.3E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 223 232 4.3E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 263 268 4.3E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 306 36.905 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 2.0E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 2.0E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 2.0E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 2.0E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 Gene3D G3DSA:3.40.50.1370 133 291 1.8E-108 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 SUPERFAMILY SSF53671 5 305 2.1E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 145 1.7E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 303 1.9E-116 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 302 1.4E-24 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 Gene3D G3DSA:3.40.50.1370 7 300 1.8E-108 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_02520 942b0331495bc0dceb72e5b0897d5563 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_11835 cec40005690a671606ff159e45f1b71f 691 Pfam PF01434 Peptidase family M41 439 646 5.3E-73 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JO41_11835 cec40005690a671606ff159e45f1b71f 691 Gene3D G3DSA:1.10.8.60 378 455 1.3E-26 T 14-10-2018 JO41_11835 cec40005690a671606ff159e45f1b71f 691 SMART SM00382 241 379 6.7E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11835 cec40005690a671606ff159e45f1b71f 691 SUPERFAMILY SSF52540 207 471 5.3E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11835 cec40005690a671606ff159e45f1b71f 691 ProSitePatterns PS00674 AAA-protein family signature. 347 365 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 JO41_11835 cec40005690a671606ff159e45f1b71f 691 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 245 376 4.7E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_11835 cec40005690a671606ff159e45f1b71f 691 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 19 670 35.262 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JO41_11835 cec40005690a671606ff159e45f1b71f 691 SUPERFAMILY SSF140990 458 651 2.88E-62 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JO41_11835 cec40005690a671606ff159e45f1b71f 691 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 152 647 2.3E-219 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JO41_11835 cec40005690a671606ff159e45f1b71f 691 Gene3D G3DSA:3.40.50.300 196 377 4.8E-67 T 14-10-2018 JO41_11835 cec40005690a671606ff159e45f1b71f 691 Gene3D G3DSA:1.20.58.760 458 657 1.1E-65 T 14-10-2018 JO41_11850 c5b59ee071d2ea299d1fcd44a19abedb 179 Pfam PF13581 Histidine kinase-like ATPase domain 39 109 6.4E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_11850 c5b59ee071d2ea299d1fcd44a19abedb 179 Gene3D G3DSA:3.30.565.10 21 139 3.1E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_11850 c5b59ee071d2ea299d1fcd44a19abedb 179 SUPERFAMILY SSF55874 44 106 1.09E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_09155 5330451038444eb01dc83b4276960ae9 286 SUPERFAMILY SSF51395 55 284 6.23E-23 T 14-10-2018 JO41_09155 5330451038444eb01dc83b4276960ae9 286 Pfam PF01070 FMN-dependent dehydrogenase 163 283 2.4E-23 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 JO41_09155 5330451038444eb01dc83b4276960ae9 286 Gene3D G3DSA:3.20.20.70 50 286 5.4E-28 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_09685 e908850971cfb00cf0de607b39753689 228 Pfam PF00005 ABC transporter 19 164 9.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09685 e908850971cfb00cf0de607b39753689 228 SMART SM00382 28 214 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09685 e908850971cfb00cf0de607b39753689 228 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_09685 e908850971cfb00cf0de607b39753689 228 Gene3D G3DSA:3.40.50.300 1 216 4.9E-68 T 14-10-2018 JO41_09685 e908850971cfb00cf0de607b39753689 228 SUPERFAMILY SSF52540 3 219 2.72E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00130 0cbb843c6a99871dabf4ec2740452a1f 486 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 486 75.913 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO41_00130 0cbb843c6a99871dabf4ec2740452a1f 486 ProSitePatterns PS00571 Amidases signature. 156 187 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 JO41_00130 0cbb843c6a99871dabf4ec2740452a1f 486 Pfam PF01425 Amidase 33 475 3.4E-141 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO41_00130 0cbb843c6a99871dabf4ec2740452a1f 486 Gene3D G3DSA:3.90.1300.10 3 486 7.5E-162 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO41_00130 0cbb843c6a99871dabf4ec2740452a1f 486 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 18 483 9.6E-157 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO41_00130 0cbb843c6a99871dabf4ec2740452a1f 486 SUPERFAMILY SSF75304 2 484 1.07E-138 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JO41_12360 05bd904c63503ccc9010099ec282fabf 312 Pfam PF02661 Fic/DOC family 182 266 5.0E-5 T 14-10-2018 IPR003812 Fido domain JO41_12360 05bd904c63503ccc9010099ec282fabf 312 Gene3D G3DSA:1.10.3290.10 95 312 4.8E-23 T 14-10-2018 IPR036597 Fido-like domain superfamily JO41_12360 05bd904c63503ccc9010099ec282fabf 312 SUPERFAMILY SSF140931 150 308 2.88E-12 T 14-10-2018 IPR036597 Fido-like domain superfamily JO41_11945 6b1e51a0048add0a642b82428a608045 483 SUPERFAMILY SSF46689 375 470 1.88E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_11945 6b1e51a0048add0a642b82428a608045 483 Gene3D G3DSA:3.40.50.300 147 334 2.9E-64 T 14-10-2018 JO41_11945 6b1e51a0048add0a642b82428a608045 483 Gene3D G3DSA:3.30.450.20 16 134 6.3E-15 T 14-10-2018 JO41_11945 6b1e51a0048add0a642b82428a608045 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 375 384 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JO41_11945 6b1e51a0048add0a642b82428a608045 483 SMART SM00382 182 337 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11945 6b1e51a0048add0a642b82428a608045 483 SUPERFAMILY SSF52540 162 400 7.62E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11945 6b1e51a0048add0a642b82428a608045 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 186 199 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO41_11945 6b1e51a0048add0a642b82428a608045 483 Gene3D G3DSA:1.10.8.60 335 415 4.2E-23 T 14-10-2018 JO41_11945 6b1e51a0048add0a642b82428a608045 483 Pfam PF00158 Sigma-54 interaction domain 165 329 4.9E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO41_11945 6b1e51a0048add0a642b82428a608045 483 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 134 9.7E-12 T 14-10-2018 IPR000014 PAS domain JO41_11945 6b1e51a0048add0a642b82428a608045 483 Gene3D G3DSA:1.10.10.60 423 473 1.7E-5 T 14-10-2018 JO41_11945 6b1e51a0048add0a642b82428a608045 483 Pfam PF00989 PAS fold 21 125 1.8E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 JO41_11945 6b1e51a0048add0a642b82428a608045 483 SUPERFAMILY SSF55785 17 119 5.41E-13 T 14-10-2018 IPR035965 PAS domain superfamily JO41_00145 ed9aabb2a2ea672f7338008c5998a97e 456 Gene3D G3DSA:1.20.1250.20 30 232 2.1E-15 T 14-10-2018 JO41_00145 ed9aabb2a2ea672f7338008c5998a97e 456 Gene3D G3DSA:1.20.1250.20 244 454 4.2E-12 T 14-10-2018 JO41_00145 ed9aabb2a2ea672f7338008c5998a97e 456 Pfam PF13347 MFS/sugar transport protein 31 450 5.6E-95 T 14-10-2018 JO41_00145 ed9aabb2a2ea672f7338008c5998a97e 456 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 80 105 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 JO41_00145 ed9aabb2a2ea672f7338008c5998a97e 456 SUPERFAMILY SSF103473 33 453 3.31E-37 T 14-10-2018 IPR036259 MFS transporter superfamily JO41_00145 ed9aabb2a2ea672f7338008c5998a97e 456 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 29 453 6.5E-78 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 JO41_11000 7103bc296caed044110c3a7929261b73 952 Gene3D G3DSA:1.10.150.20 733 876 1.4E-109 T 14-10-2018 JO41_11000 7103bc296caed044110c3a7929261b73 952 Pfam PF00476 DNA polymerase family A 576 950 3.2E-151 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 175 1.2E-49 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 JO41_11000 7103bc296caed044110c3a7929261b73 952 Gene3D G3DSA:3.30.70.370 688 948 1.4E-109 T 14-10-2018 JO41_11000 7103bc296caed044110c3a7929261b73 952 Gene3D G3DSA:1.10.150.20 179 251 2.4E-92 T 14-10-2018 JO41_11000 7103bc296caed044110c3a7929261b73 952 SMART SM00482 710 916 5.9E-109 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 SUPERFAMILY SSF47807 176 285 2.84E-29 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 899 912 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 837 848 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 717 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 767 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 701 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 724 747 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 778 803 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 869 885 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 1.8E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 Gene3D G3DSA:3.30.420.10 351 567 2.7E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_11000 7103bc296caed044110c3a7929261b73 952 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 176 266 1.0E-30 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 JO41_11000 7103bc296caed044110c3a7929261b73 952 SUPERFAMILY SSF53098 350 545 2.38E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_11000 7103bc296caed044110c3a7929261b73 952 SUPERFAMILY SSF56672 548 952 7.56E-149 T 14-10-2018 JO41_11000 7103bc296caed044110c3a7929261b73 952 TIGRFAM TIGR00593 pola: DNA polymerase I 9 952 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 Gene3D G3DSA:3.40.50.1010 9 281 2.4E-92 T 14-10-2018 JO41_11000 7103bc296caed044110c3a7929261b73 952 Gene3D G3DSA:1.20.1060.10 569 682 2.1E-34 T 14-10-2018 JO41_11000 7103bc296caed044110c3a7929261b73 952 SMART SM00474 354 544 2.5E-29 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JO41_11000 7103bc296caed044110c3a7929261b73 952 Pfam PF01612 3'-5' exonuclease 354 538 2.0E-30 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JO41_11000 7103bc296caed044110c3a7929261b73 952 SUPERFAMILY SSF88723 4 175 7.52E-49 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_11000 7103bc296caed044110c3a7929261b73 952 ProSitePatterns PS00447 DNA polymerase family A signature. 778 797 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_11000 7103bc296caed044110c3a7929261b73 952 SMART SM00279 178 213 1.8E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 JO41_11000 7103bc296caed044110c3a7929261b73 952 SMART SM00475 5 266 2.5E-124 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 JO41_12145 28a87826a7f18b0fe41ecfc4f4b52903 249 Gene3D G3DSA:2.30.30.100 204 248 8.1E-6 T 14-10-2018 JO41_12145 28a87826a7f18b0fe41ecfc4f4b52903 249 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 20 248 1.1E-33 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO41_12145 28a87826a7f18b0fe41ecfc4f4b52903 249 Pfam PF02237 Biotin protein ligase C terminal domain 213 246 1.7E-5 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO41_12145 28a87826a7f18b0fe41ecfc4f4b52903 249 Pfam PF03099 Biotin/lipoate A/B protein ligase family 26 143 3.2E-9 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JO41_12145 28a87826a7f18b0fe41ecfc4f4b52903 249 Gene3D G3DSA:3.30.930.10 2 203 1.8E-39 T 14-10-2018 JO41_12145 28a87826a7f18b0fe41ecfc4f4b52903 249 SUPERFAMILY SSF55681 12 190 4.14E-39 T 14-10-2018 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 SMART SM00028 334 367 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 SMART SM00028 258 291 3.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 SMART SM00028 167 200 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 SMART SM00028 300 333 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 Pfam PF04733 Coatomer epsilon subunit 300 368 6.9E-5 T 14-10-2018 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 SUPERFAMILY SSF48452 113 370 2.94E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 Gene3D G3DSA:1.25.40.10 59 218 1.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 Pfam PF13432 Tetratricopeptide repeat 234 280 0.0018 T 14-10-2018 JO41_03220 4f198ae267b236c8db6fc510a921514b 380 Gene3D G3DSA:1.25.40.10 227 379 5.9E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12230 d7037f43a0610f49d03460edcf6e4fc0 199 Gene3D G3DSA:3.30.70.330 104 179 4.1E-18 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JO41_12230 d7037f43a0610f49d03460edcf6e4fc0 199 SUPERFAMILY SSF54928 143 181 3.3E-5 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 JO41_12230 d7037f43a0610f49d03460edcf6e4fc0 199 Pfam PF03880 DbpA RNA binding domain 106 175 9.5E-20 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JO41_09985 a7852116aa3f43887ce6d48719d454fc 335 Gene3D G3DSA:3.40.50.1820 53 306 5.6E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_09985 a7852116aa3f43887ce6d48719d454fc 335 SUPERFAMILY SSF53474 71 296 3.65E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_09985 a7852116aa3f43887ce6d48719d454fc 335 Pfam PF07224 Chlorophyllase 71 270 6.3E-14 T 14-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 JO41_01500 1e97c19abf2874f266a26faeb6220cf9 292 SUPERFAMILY SSF161098 52 281 1.83E-49 T 14-10-2018 IPR035906 MetI-like superfamily JO41_01500 1e97c19abf2874f266a26faeb6220cf9 292 Gene3D G3DSA:1.10.3720.10 48 291 1.3E-58 T 14-10-2018 IPR035906 MetI-like superfamily JO41_01500 1e97c19abf2874f266a26faeb6220cf9 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 290 2.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_12240 564de68c42ece5242f7bb231c1344db2 576 Gene3D G3DSA:3.30.230.10 3 165 2.5E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_12240 564de68c42ece5242f7bb231c1344db2 576 SUPERFAMILY SSF52540 222 569 8.7E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12240 564de68c42ece5242f7bb231c1344db2 576 Pfam PF13541 Subunit ChlI of Mg-chelatase 18 136 9.2E-39 T 14-10-2018 JO41_12240 564de68c42ece5242f7bb231c1344db2 576 Pfam PF01078 Magnesium chelatase, subunit ChlI 222 425 2.7E-70 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain JO41_12240 564de68c42ece5242f7bb231c1344db2 576 Gene3D G3DSA:3.40.50.300 207 570 1.2E-42 T 14-10-2018 JO41_12240 564de68c42ece5242f7bb231c1344db2 576 SUPERFAMILY SSF54211 4 162 7.21E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_12240 564de68c42ece5242f7bb231c1344db2 576 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 438 565 1.5E-19 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain JO41_11875 4ee4a56eb71fe416473af14de40ae5d5 322 Pfam PF01545 Cation efflux family 23 220 2.3E-35 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JO41_11875 4ee4a56eb71fe416473af14de40ae5d5 322 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 20 303 6.7E-55 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JO41_11875 4ee4a56eb71fe416473af14de40ae5d5 322 Pfam PF16916 Dimerisation domain of Zinc Transporter 227 302 1.9E-18 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain JO41_11875 4ee4a56eb71fe416473af14de40ae5d5 322 Gene3D G3DSA:3.30.70.1350 220 304 1.3E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JO41_11875 4ee4a56eb71fe416473af14de40ae5d5 322 Gene3D G3DSA:1.20.1510.10 17 219 1.8E-42 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JO41_11875 4ee4a56eb71fe416473af14de40ae5d5 322 SUPERFAMILY SSF160240 225 303 4.19E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JO41_11875 4ee4a56eb71fe416473af14de40ae5d5 322 SUPERFAMILY SSF161111 15 221 4.45E-44 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JO41_08695 29e1e55d69a908e44a0907703ed19902 226 Gene3D G3DSA:3.30.565.40 26 136 1.2E-11 T 14-10-2018 JO41_08695 29e1e55d69a908e44a0907703ed19902 226 Gene3D G3DSA:3.90.640.20 141 226 6.4E-14 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily JO41_08695 29e1e55d69a908e44a0907703ed19902 226 Pfam PF11738 Protein of unknown function (DUF3298) 148 223 4.6E-12 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 JO41_08695 29e1e55d69a908e44a0907703ed19902 226 Pfam PF13739 Domain of unknown function (DUF4163) 41 122 9.0E-9 T 14-10-2018 IPR025303 Deacetylase PdaC JO41_04830 d3cbea7de0e317931eadb329ce948b74 351 Pfam PF00268 Ribonucleotide reductase, small chain 36 314 6.7E-85 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_04830 d3cbea7de0e317931eadb329ce948b74 351 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 123 139 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_04830 d3cbea7de0e317931eadb329ce948b74 351 PIRSF PIRSF000355 4 351 1.1E-127 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JO41_04830 d3cbea7de0e317931eadb329ce948b74 351 Gene3D G3DSA:1.10.620.20 12 324 3.2E-96 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JO41_04830 d3cbea7de0e317931eadb329ce948b74 351 SUPERFAMILY SSF47240 25 347 1.35E-92 T 14-10-2018 IPR009078 Ferritin-like superfamily JO41_12045 97599610069e733fe760a0aed8a26ba7 163 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 9 152 1.8E-36 T 14-10-2018 IPR026353 Hypoxanthine-DNA glycosylase JO41_12045 97599610069e733fe760a0aed8a26ba7 163 SMART SM00986 10 156 5.3E-6 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_12045 97599610069e733fe760a0aed8a26ba7 163 SMART SM00987 10 156 5.3E-6 T 14-10-2018 JO41_12045 97599610069e733fe760a0aed8a26ba7 163 Pfam PF03167 Uracil DNA glycosylase superfamily 14 154 2.7E-10 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_12045 97599610069e733fe760a0aed8a26ba7 163 SUPERFAMILY SSF52141 8 156 4.05E-27 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_12045 97599610069e733fe760a0aed8a26ba7 163 Gene3D G3DSA:3.40.470.10 4 161 2.2E-48 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_03190 3dff595e76765e7115a1a29fa388b876 301 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 15 299 4.0E-36 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_03190 3dff595e76765e7115a1a29fa388b876 301 Pfam PF12784 PD-(D/E)XK nuclease family transposase 14 235 1.1E-58 T 14-10-2018 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 235 3.7E-37 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 Gene3D G3DSA:3.10.290.10 1 59 3.8E-10 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 Pfam PF01479 S4 domain 3 46 8.1E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 Gene3D G3DSA:3.30.70.1560 131 221 2.3E-47 T 14-10-2018 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 Pfam PF00849 RNA pseudouridylate synthase 64 203 8.3E-13 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 SUPERFAMILY SSF55120 64 239 5.22E-36 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 SUPERFAMILY SSF55174 3 95 7.85E-11 T 14-10-2018 JO41_09150 309e07d877299d49904ac0fa3f4809e5 245 Gene3D G3DSA:3.30.70.580 64 239 2.3E-47 T 14-10-2018 JO41_10890 c45b82e6c4b70e1223518d2ba29c98a4 513 PIRSF PIRSF500217 1 513 2.1E-126 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 JO41_10890 c45b82e6c4b70e1223518d2ba29c98a4 513 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 135 358 4.2E-25 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT JO41_10890 c45b82e6c4b70e1223518d2ba29c98a4 513 PIRSF PIRSF016636 1 513 2.5E-127 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 SUPERFAMILY SSF54211 8 160 5.16E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 266 9.8E-53 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 PIRSF PIRSF010376 4 287 3.4E-75 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 SUPERFAMILY SSF55060 165 283 1.06E-20 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 Gene3D G3DSA:3.30.70.890 165 284 6.3E-22 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 Pfam PF00288 GHMP kinases N terminal domain 89 138 2.8E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 286 29.832 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JO41_09810 af9105542de8bdf0b342cbd3f9fa4cb7 288 Gene3D G3DSA:3.30.230.10 1 161 1.1E-49 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 SUPERFAMILY SSF48403 147 295 1.14E-34 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 Pfam PF12796 Ankyrin repeats (3 copies) 214 293 2.7E-9 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 Pfam PF12796 Ankyrin repeats (3 copies) 147 205 2.1E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 Gene3D G3DSA:1.25.40.20 142 298 4.1E-36 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 SMART SM00248 175 204 1.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 SMART SM00248 142 171 380.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 SMART SM00248 209 238 0.095 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_11310 1e1756e5bf34596d39efeb63dad004ae 298 SMART SM00248 242 271 0.022 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_07530 32237b6b95229f490b910eccd09de2b9 181 ProSitePatterns PS00855 Signal peptidases II signature. 106 118 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO41_07530 32237b6b95229f490b910eccd09de2b9 181 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 169 12.985 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO41_07530 32237b6b95229f490b910eccd09de2b9 181 TIGRFAM TIGR00077 lspA: signal peptidase II 6 170 1.1E-30 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO41_07530 32237b6b95229f490b910eccd09de2b9 181 Pfam PF01252 Signal peptidase (SPase) II 16 163 3.5E-28 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO41_07530 32237b6b95229f490b910eccd09de2b9 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 103 118 9.3E-12 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO41_07530 32237b6b95229f490b910eccd09de2b9 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 9.3E-12 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO41_07530 32237b6b95229f490b910eccd09de2b9 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 144 160 9.3E-12 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.323 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 PIRSF PIRSF002133 1 124 5.2E-56 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.7E-70 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 SUPERFAMILY SSF50249 2 123 6.28E-54 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.2E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.2E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.2E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.2E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.2E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.2E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.1E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01780 8e3fe7ad83cbe6a1b0c24694809d348e 124 Gene3D G3DSA:2.40.50.140 1 124 5.4E-65 T 14-10-2018 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PRINTS PR00959 Mevalonate kinase family signature 22 46 9.5E-19 T 14-10-2018 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PRINTS PR00959 Mevalonate kinase family signature 331 348 9.5E-19 T 14-10-2018 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PRINTS PR00959 Mevalonate kinase family signature 114 136 9.5E-19 T 14-10-2018 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 Pfam PF10509 Galactokinase galactose-binding signature 9 55 1.3E-11 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 Gene3D G3DSA:3.30.70.890 197 359 1.1E-74 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 SUPERFAMILY SSF54211 2 198 2.73E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 Gene3D G3DSA:3.30.230.10 19 196 1.1E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PIRSF PIRSF000530 1 384 2.1E-82 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 SUPERFAMILY SSF55060 200 383 3.36E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PRINTS PR00473 Galactokinase signature 262 276 3.1E-7 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PRINTS PR00473 Galactokinase signature 24 42 3.1E-7 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PRINTS PR00473 Galactokinase signature 87 98 3.1E-7 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_00835 b364e442a29858ab8aef6e25d4bb47fd 384 PRINTS PR00473 Galactokinase signature 107 125 3.1E-7 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_06755 a0f2e5d369ed3c021057a0b4942fa171 190 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 1 190 23.363 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 JO41_06755 a0f2e5d369ed3c021057a0b4942fa171 190 PIRSF PIRSF006102 1 190 1.7E-56 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JO41_06755 a0f2e5d369ed3c021057a0b4942fa171 190 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 190 1.5E-52 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JO41_06755 a0f2e5d369ed3c021057a0b4942fa171 190 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 1 190 2.7E-69 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 246 272 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 SUPERFAMILY SSF88659 128 199 6.17E-8 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 Pfam PF04542 Sigma-70 region 2 50 118 2.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 PRINTS PR00046 Major sigma-70 factor signature 225 237 1.3E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 PRINTS PR00046 Major sigma-70 factor signature 98 106 1.3E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 PRINTS PR00046 Major sigma-70 factor signature 261 272 1.3E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 PRINTS PR00046 Major sigma-70 factor signature 74 87 1.3E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 PRINTS PR00046 Major sigma-70 factor signature 246 261 1.3E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 Pfam PF04539 Sigma-70 region 3 135 207 2.3E-11 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 274 5.8E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 Gene3D G3DSA:1.10.10.10 123 201 5.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 74 87 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 Pfam PF00140 Sigma-70 factor, region 1.2 16 44 5.9E-11 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 SUPERFAMILY SSF88946 10 119 3.45E-43 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 Gene3D G3DSA:1.10.10.10 203 286 2.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 Pfam PF04545 Sigma-70, region 4 221 273 4.4E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 SUPERFAMILY SSF88659 186 276 4.49E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 PIRSF PIRSF000770 5 280 2.1E-36 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JO41_03685 cb65afa3e0006c32581f8d0430b153fb 286 Gene3D G3DSA:1.10.601.10 1 119 4.2E-41 T 14-10-2018 JO41_06730 2883e99556c63479bbcf1cebaaf2da04 398 Pfam PF07055 Enoyl reductase FAD binding domain 329 392 1.7E-24 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO41_06730 2883e99556c63479bbcf1cebaaf2da04 398 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 86 321 1.8E-104 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO41_06730 2883e99556c63479bbcf1cebaaf2da04 398 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 398 51.73 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO41_06730 2883e99556c63479bbcf1cebaaf2da04 398 Gene3D G3DSA:3.40.50.720 1 398 1.6E-163 T 14-10-2018 JO41_06730 2883e99556c63479bbcf1cebaaf2da04 398 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 84 1.1E-33 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 Gene3D G3DSA:1.10.10.770 332 440 4.5E-28 T 14-10-2018 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 Gene3D G3DSA:3.40.50.620 13 283 1.5E-92 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 SUPERFAMILY SSF52374 12 332 5.63E-55 T 14-10-2018 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 Pfam PF01921 tRNA synthetases class I (K) 12 375 7.6E-128 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 11 533 33.116 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 11 531 2.7E-166 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 Gene3D G3DSA:2.30.30.300 181 226 1.5E-92 T 14-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 48 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 SUPERFAMILY SSF48163 336 530 1.96E-33 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 Gene3D G3DSA:1.10.10.860 284 331 6.0E-24 T 14-10-2018 JO41_03365 69928d79d7d13bb0c1907fbd7ce48352 533 Gene3D G3DSA:1.10.10.350 441 531 3.6E-20 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 Pfam PF13306 Leucine rich repeats (6 copies) 1779 1878 1.5E-8 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 Gene3D G3DSA:3.80.10.10 1736 1921 1.8E-11 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SUPERFAMILY SSF51126 757 1179 3.97E-19 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 Gene3D G3DSA:2.160.20.10 759 1115 2.7E-5 T 14-10-2018 IPR012334 Pectin lyase fold JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SUPERFAMILY SSF51126 1203 1499 2.22E-18 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1287 1318 3400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1445 1466 2100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1069 1095 1700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1044 1068 4700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 621 643 7600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 839 876 890.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 914 939 10000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 977 1007 9700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1011 1037 830.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1582 1614 4600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1476 1501 5100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1508 1541 4500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1390 1410 1400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 943 969 860.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 1348 1385 700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02380 f6665c4ee578df50e3b16af655c2cd08 1927 SMART SM00710 880 901 620.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_02290 4652e06cb31f323e73da127891b4b5cd 395 Pfam PF00589 Phage integrase family 186 369 1.9E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO41_02290 4652e06cb31f323e73da127891b4b5cd 395 Gene3D G3DSA:1.10.150.130 96 180 3.6E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JO41_02290 4652e06cb31f323e73da127891b4b5cd 395 Gene3D G3DSA:1.10.443.10 185 383 5.5E-28 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO41_02290 4652e06cb31f323e73da127891b4b5cd 395 SUPERFAMILY SSF56349 100 373 1.03E-45 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO41_07075 333b415b57373b444276a79435b95221 302 SUPERFAMILY SSF51621 9 243 1.7E-62 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JO41_07075 333b415b57373b444276a79435b95221 302 PIRSF PIRSF015582 1 302 5.2E-81 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like JO41_07075 333b415b57373b444276a79435b95221 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 13 232 4.2E-69 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JO41_07075 333b415b57373b444276a79435b95221 302 Gene3D G3DSA:3.20.20.60 2 297 1.1E-86 T 14-10-2018 JO41_09805 1a2d2d0d2252754ed1a67bb6dba22b4c 133 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 14-10-2018 IPR019808 Histidine triad, conserved site JO41_09805 1a2d2d0d2252754ed1a67bb6dba22b4c 133 Gene3D G3DSA:3.30.428.10 1 133 4.3E-40 T 14-10-2018 IPR036265 HIT-like superfamily JO41_09805 1a2d2d0d2252754ed1a67bb6dba22b4c 133 PRINTS PR00332 Histidine triad family signature 5 21 1.1E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JO41_09805 1a2d2d0d2252754ed1a67bb6dba22b4c 133 PRINTS PR00332 Histidine triad family signature 26 44 1.1E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JO41_09805 1a2d2d0d2252754ed1a67bb6dba22b4c 133 PRINTS PR00332 Histidine triad family signature 93 103 1.1E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JO41_09805 1a2d2d0d2252754ed1a67bb6dba22b4c 133 Pfam PF01230 HIT domain 11 107 2.3E-25 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JO41_09805 1a2d2d0d2252754ed1a67bb6dba22b4c 133 SUPERFAMILY SSF54197 2 120 5.57E-40 T 14-10-2018 IPR036265 HIT-like superfamily JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Pfam PF00122 E1-E2 ATPase 241 418 2.9E-56 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Gene3D G3DSA:3.40.1110.10 451 584 2.0E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Gene3D G3DSA:3.40.50.1000 421 703 2.0E-84 T 14-10-2018 IPR023214 HAD superfamily JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Gene3D G3DSA:3.30.70.100 799 869 2.0E-19 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 290 304 4.5E-29 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 588 4.5E-29 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 671 4.5E-29 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 675 687 4.5E-29 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 609 4.5E-29 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 440 454 4.5E-29 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 SUPERFAMILY SSF55008 801 869 1.31E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 ProSitePatterns PS01047 Heavy-metal-associated domain. 811 839 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 SUPERFAMILY SSF81653 243 340 1.12E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 549 733 2.7E-43 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 212 467 1.2E-46 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 442 448 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 SUPERFAMILY SSF55008 1 73 2.36E-22 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 18 32 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 230 248 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 149 168 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 47 67 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 363 377 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 629 646 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 423 438 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00943 Copper-transporting ATPase signature 686 700 1.2E-20 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Gene3D G3DSA:3.30.70.100 1 79 2.4E-22 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 66 1.7E-12 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 807 868 1.5E-14 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Gene3D G3DSA:2.70.150.20 233 345 2.7E-38 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 SUPERFAMILY SSF56784 439 759 2.16E-53 T 14-10-2018 IPR036412 HAD-like superfamily JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Pfam PF00702 haloacid dehalogenase-like hydrolase 436 666 5.8E-36 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 164 761 5.2E-182 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 8.1E-8 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00942 Copper-transporting ATPase 1 signature 58 78 8.1E-8 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 PRINTS PR00942 Copper-transporting ATPase 1 signature 29 52 8.1E-8 T 14-10-2018 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 SUPERFAMILY SSF81665 209 433 7.98E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Pfam PF00403 Heavy-metal-associated domain 808 866 1.8E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JO41_12080 b3ca1b8b2d5fab5965ad7065de7fc55b 872 Pfam PF00403 Heavy-metal-associated domain 6 65 1.1E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JO41_11205 5234d13be2d0635074c17e40492d8656 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 2 184 26.664 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JO41_11205 5234d13be2d0635074c17e40492d8656 184 Gene3D G3DSA:3.30.1360.40 30 104 1.1E-68 T 14-10-2018 JO41_11205 5234d13be2d0635074c17e40492d8656 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 9 183 1.6E-69 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JO41_11205 5234d13be2d0635074c17e40492d8656 184 Pfam PF01765 Ribosome recycling factor 19 182 3.8E-64 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 JO41_11205 5234d13be2d0635074c17e40492d8656 184 Gene3D G3DSA:1.10.132.20 11 181 1.1E-68 T 14-10-2018 JO41_11205 5234d13be2d0635074c17e40492d8656 184 SUPERFAMILY SSF55194 3 183 2.09E-70 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 JO41_00075 6a0581ddaee847ef47f9e07872ddf552 782 PIRSF PIRSF008381 297 518 1.1E-11 T 14-10-2018 IPR011191 Uncharacterised protein family Treponema vWA JO41_00075 6a0581ddaee847ef47f9e07872ddf552 782 PIRSF PIRSF008381 1 294 1.7E-63 T 14-10-2018 IPR011191 Uncharacterised protein family Treponema vWA JO41_00075 6a0581ddaee847ef47f9e07872ddf552 782 PIRSF PIRSF008381 583 779 8.7E-53 T 14-10-2018 IPR011191 Uncharacterised protein family Treponema vWA JO41_00075 6a0581ddaee847ef47f9e07872ddf552 782 SUPERFAMILY SSF53300 30 182 3.94E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_00075 6a0581ddaee847ef47f9e07872ddf552 782 Gene3D G3DSA:3.40.50.410 14 193 2.1E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_00075 6a0581ddaee847ef47f9e07872ddf552 782 SMART SM00327 29 207 0.0019 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_05210 8fe4933c177acf81bf6b8353fe26b261 258 Gene3D G3DSA:3.90.650.10 69 258 3.8E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO41_05210 8fe4933c177acf81bf6b8353fe26b261 258 Pfam PF02769 AIR synthase related protein, C-terminal domain 74 256 4.5E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JO41_05210 8fe4933c177acf81bf6b8353fe26b261 258 TIGRFAM TIGR00476 selD: selenide, water dikinase 1 220 1.5E-72 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JO41_05210 8fe4933c177acf81bf6b8353fe26b261 258 SUPERFAMILY SSF56042 68 254 4.49E-47 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JO41_05210 8fe4933c177acf81bf6b8353fe26b261 258 SUPERFAMILY SSF55326 1 67 1.03E-12 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO41_05210 8fe4933c177acf81bf6b8353fe26b261 258 Gene3D G3DSA:3.30.1330.10 1 67 8.9E-13 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JO41_02630 66118ff8e277864f7e951f2153121c18 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 3 233 2.0E-89 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 JO41_02630 66118ff8e277864f7e951f2153121c18 246 SUPERFAMILY SSF102114 20 215 3.14E-28 T 14-10-2018 JO41_02630 66118ff8e277864f7e951f2153121c18 246 ProSitePatterns PS01087 Radical activating enzymes signature. 15 36 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 JO41_02630 66118ff8e277864f7e951f2153121c18 246 PIRSF PIRSF000371 43 240 6.4E-41 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 JO41_02630 66118ff8e277864f7e951f2153121c18 246 PIRSF PIRSF000371 1 51 2.6E-13 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 JO41_02630 66118ff8e277864f7e951f2153121c18 246 Pfam PF04055 Radical SAM superfamily 21 173 6.6E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_02630 66118ff8e277864f7e951f2153121c18 246 Pfam PF13353 4Fe-4S single cluster domain 13 137 4.2E-20 T 14-10-2018 JO41_02630 66118ff8e277864f7e951f2153121c18 246 Gene3D G3DSA:3.20.20.70 1 240 7.4E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_12075 ce96fb5501e67eeef4f31870f0ff9c04 232 Gene3D G3DSA:2.60.450.10 27 155 2.4E-9 T 14-10-2018 JO41_12075 ce96fb5501e67eeef4f31870f0ff9c04 232 Gene3D G3DSA:2.60.450.10 156 212 2.1E-6 T 14-10-2018 JO41_12075 ce96fb5501e67eeef4f31870f0ff9c04 232 Pfam PF13100 OstA-like protein 60 158 1.7E-5 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal JO41_00340 15fcb872d8f53abd9c1533f0c1f7362d 367 Gene3D G3DSA:3.60.10.10 64 367 3.8E-33 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO41_00340 15fcb872d8f53abd9c1533f0c1f7362d 367 SUPERFAMILY SSF56219 64 366 4.58E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO41_07785 e380838feceb56c44c8cabe53d590c99 311 Gene3D G3DSA:3.40.50.1820 7 286 1.0E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_07785 e380838feceb56c44c8cabe53d590c99 311 SUPERFAMILY SSF53474 41 260 9.44E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_07785 e380838feceb56c44c8cabe53d590c99 311 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 71 259 2.6E-24 T 14-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal JO41_12205 30ee9341cdf5f79437c9e0d48881764d 341 Pfam PF00494 Squalene/phytoene synthase 29 313 2.2E-56 T 14-10-2018 JO41_12205 30ee9341cdf5f79437c9e0d48881764d 341 Gene3D G3DSA:1.10.600.10 9 328 1.1E-82 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JO41_12205 30ee9341cdf5f79437c9e0d48881764d 341 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 191 217 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JO41_12205 30ee9341cdf5f79437c9e0d48881764d 341 SUPERFAMILY SSF48576 22 325 5.04E-62 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JO41_01095 c52294858e76f718d2327a3221b42f04 286 Gene3D G3DSA:3.40.50.1220 11 127 1.0E-9 T 14-10-2018 JO41_01095 c52294858e76f718d2327a3221b42f04 286 Gene3D G3DSA:3.30.1600.10 32 180 1.0E-9 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily JO41_01095 c52294858e76f718d2327a3221b42f04 286 SUPERFAMILY SSF52467 2 285 1.03E-38 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO41_10695 d20cadbd61dc55730b3330f767b68290 310 SUPERFAMILY SSF48452 123 299 2.15E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10695 d20cadbd61dc55730b3330f767b68290 310 Gene3D G3DSA:1.25.40.10 50 309 4.7E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10695 d20cadbd61dc55730b3330f767b68290 310 Pfam PF13432 Tetratricopeptide repeat 132 196 9.6E-4 T 14-10-2018 JO41_10695 d20cadbd61dc55730b3330f767b68290 310 Pfam PF13432 Tetratricopeptide repeat 239 290 4.0E-5 T 14-10-2018 JO41_10695 d20cadbd61dc55730b3330f767b68290 310 SMART SM00028 267 300 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_10695 d20cadbd61dc55730b3330f767b68290 310 SMART SM00028 163 196 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_10695 d20cadbd61dc55730b3330f767b68290 310 SMART SM00028 233 266 1.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_01975 adda63dcde64ddc65aa97f52072bd714 414 Pfam PF01136 Peptidase family U32 88 310 1.7E-85 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JO41_01975 adda63dcde64ddc65aa97f52072bd714 414 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 Gene3D G3DSA:3.40.50.300 331 583 3.1E-84 T 14-10-2018 JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 SUPERFAMILY SSF52540 331 575 5.1E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 Gene3D G3DSA:1.20.1560.10 4 320 1.2E-19 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 Pfam PF00005 ABC transporter 359 507 4.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 SMART SM00382 367 553 9.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 SUPERFAMILY SSF90123 14 491 3.92E-30 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10765 935b0607520c1b584a8d7c7bbf2e3298 585 Pfam PF00664 ABC transporter transmembrane region 28 294 8.3E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_03980 6277709fdbd9eac162fffc5950b7ece0 347 SUPERFAMILY SSF63825 55 256 6.8E-5 T 14-10-2018 JO41_09800 fc0419edd4179b317b971c7d2c2c9fa3 640 Gene3D G3DSA:3.40.50.12780 1 300 3.2E-44 T 14-10-2018 JO41_09800 fc0419edd4179b317b971c7d2c2c9fa3 640 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 14-10-2018 IPR020845 AMP-binding, conserved site JO41_09800 fc0419edd4179b317b971c7d2c2c9fa3 640 Pfam PF00501 AMP-binding enzyme 11 508 3.6E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO41_09800 fc0419edd4179b317b971c7d2c2c9fa3 640 Gene3D G3DSA:3.40.50.12780 344 497 5.6E-37 T 14-10-2018 JO41_09800 fc0419edd4179b317b971c7d2c2c9fa3 640 SUPERFAMILY SSF56801 5 558 2.88E-103 T 14-10-2018 JO41_01615 6a742d944bbd334b98f6c6585472e893 1198 Pfam PF00128 Alpha amylase, catalytic domain 338 694 6.0E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_01615 6a742d944bbd334b98f6c6585472e893 1198 SMART SM00642 334 708 2.4E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_01615 6a742d944bbd334b98f6c6585472e893 1198 SUPERFAMILY SSF51445 330 794 3.63E-61 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 SUPERFAMILY SSF53335 20 272 4.22E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 Gene3D G3DSA:3.40.50.150 14 306 1.2E-37 T 14-10-2018 JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 53 67 9.8E-13 T 14-10-2018 JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 164 188 9.8E-13 T 14-10-2018 JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 28 44 9.8E-13 T 14-10-2018 JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 133 145 9.8E-13 T 14-10-2018 JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 Pfam PF02384 N-6 DNA Methylase 20 249 2.5E-11 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO41_10390 d3c1b4e6c9a27ee5d564c428a712b872 490 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 136 142 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 Gene3D G3DSA:1.20.1270.10 517 600 2.8E-29 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 597 0.0 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 330 344 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 Gene3D G3DSA:3.30.420.40 5 372 5.2E-157 T 14-10-2018 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 SUPERFAMILY SSF100920 377 533 1.31E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 SUPERFAMILY SSF100934 500 599 9.29E-20 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 SUPERFAMILY SSF53067 1 179 2.1E-62 T 14-10-2018 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 53 61 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 462 478 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 327 343 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 381 400 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 195 205 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 134 154 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 PRINTS PR00301 70kDa heat shock protein signature 358 378 6.6E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 38.01 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 Gene3D G3DSA:3.30.420.40 176 359 5.2E-157 T 14-10-2018 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 189 202 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 Gene3D G3DSA:2.60.34.10 377 516 2.1E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 Pfam PF00012 Hsp70 protein 4 597 2.8E-270 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 SUPERFAMILY SSF53067 184 375 2.2E-69 T 14-10-2018 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 Gene3D G3DSA:3.90.640.10 222 309 5.2E-157 T 14-10-2018 JO41_07970 fd936921fbb247b7361802b6338e9fac 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JO41_07940 66a036269c3f04ee04dd73d6b1fb0d70 575 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 14-10-2018 IPR020845 AMP-binding, conserved site JO41_07940 66a036269c3f04ee04dd73d6b1fb0d70 575 Pfam PF00501 AMP-binding enzyme 17 430 8.7E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO41_07940 66a036269c3f04ee04dd73d6b1fb0d70 575 SUPERFAMILY SSF56801 9 557 7.98E-116 T 14-10-2018 JO41_08035 7697ed33169c031262d3cf1e7b81fc13 288 Pfam PF03755 YicC-like family, N-terminal region 1 153 3.3E-33 T 14-10-2018 IPR013527 YicC-like, N-terminal JO41_08035 7697ed33169c031262d3cf1e7b81fc13 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 2.8E-27 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 JO41_08035 7697ed33169c031262d3cf1e7b81fc13 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 6.3E-59 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 JO41_02540 b7242d8b274444a03f6bac211114b564 609 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_02540 b7242d8b274444a03f6bac211114b564 609 SUPERFAMILY SSF52540 376 599 2.4E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02540 b7242d8b274444a03f6bac211114b564 609 Pfam PF00664 ABC transporter transmembrane region 20 284 1.1E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_02540 b7242d8b274444a03f6bac211114b564 609 Pfam PF00005 ABC transporter 383 531 1.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_02540 b7242d8b274444a03f6bac211114b564 609 Gene3D G3DSA:1.20.1560.10 1 328 2.1E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_02540 b7242d8b274444a03f6bac211114b564 609 Gene3D G3DSA:3.40.50.300 329 603 3.6E-78 T 14-10-2018 JO41_02540 b7242d8b274444a03f6bac211114b564 609 SUPERFAMILY SSF90123 2 328 1.01E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_02540 b7242d8b274444a03f6bac211114b564 609 SMART SM00382 391 577 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 SUPERFAMILY SSF58104 495 751 6.15E-34 T 14-10-2018 JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 246 271 2.5E-14 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 587 614 2.5E-14 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 616 645 2.5E-14 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 559 698 1.2E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 Gene3D G3DSA:1.10.287.950 441 771 4.6E-38 T 14-10-2018 JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 SMART SM00283 489 754 5.3E-21 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_00140 c1f85480daa0d00e09ecb9241bbec5e6 790 Pfam PF07695 7TM diverse intracellular signalling 220 417 4.3E-20 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_06040 dcb1748bcf96cdd507524702cb280453 227 Pfam PF08713 DNA alkylation repair enzyme 31 194 4.8E-13 T 14-10-2018 IPR014825 DNA alkylation repair enzyme JO41_06040 dcb1748bcf96cdd507524702cb280453 227 Gene3D G3DSA:1.25.10.90 3 220 1.5E-15 T 14-10-2018 JO41_06040 dcb1748bcf96cdd507524702cb280453 227 SUPERFAMILY SSF48371 8 209 3.74E-31 T 14-10-2018 IPR016024 Armadillo-type fold JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 406 422 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 SMART SM00534 324 509 3.7E-51 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 Pfam PF00488 MutS domain V 327 508 2.0E-27 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 SMART SM00463 732 810 1.0E-10 T 14-10-2018 IPR002625 Smr domain JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 809 17.587 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 SUPERFAMILY SSF48334 35 284 9.55E-12 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 PIRSF PIRSF005814 1 810 2.4E-184 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 Gene3D G3DSA:3.40.50.300 292 594 4.9E-66 T 14-10-2018 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 SMART SM00533 9 312 1.1E-4 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 Gene3D G3DSA:3.30.1370.110 724 810 3.5E-20 T 14-10-2018 JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 SUPERFAMILY SSF160443 734 810 2.75E-7 T 14-10-2018 IPR036063 Smr domain superfamily JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 Pfam PF01713 Smr domain 737 810 6.2E-15 T 14-10-2018 IPR002625 Smr domain JO41_06995 f888ac9835cd567e6ee670444b8d3c25 810 SUPERFAMILY SSF52540 291 509 9.67E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09125 426c9b58f31a5230614fd47711d9f39d 419 Gene3D G3DSA:3.40.50.11400 47 162 4.7E-79 T 14-10-2018 JO41_09125 426c9b58f31a5230614fd47711d9f39d 419 SUPERFAMILY SSF53822 96 271 3.01E-5 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO41_09125 426c9b58f31a5230614fd47711d9f39d 419 Gene3D G3DSA:3.40.50.11390 163 320 4.7E-79 T 14-10-2018 JO41_09125 426c9b58f31a5230614fd47711d9f39d 419 Pfam PF12683 Protein of unknown function (DUF3798) 47 322 1.4E-130 T 14-10-2018 IPR024258 Protein of unknown function DUF3798 JO41_06145 5493ae7c0097dbea6bbd105af4bd5585 102 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 65 9.3E-19 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_06145 5493ae7c0097dbea6bbd105af4bd5585 102 Gene3D G3DSA:1.10.1220.10 3 92 6.1E-9 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JO41_06145 5493ae7c0097dbea6bbd105af4bd5585 102 Pfam PF04221 RelB antitoxin 5 62 1.5E-12 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 Gene3D G3DSA:3.30.160.20 170 240 8.6E-24 T 14-10-2018 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 Gene3D G3DSA:1.10.1520.10 12 163 5.9E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 SUPERFAMILY SSF54768 127 239 2.83E-27 T 14-10-2018 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 Pfam PF00035 Double-stranded RNA binding motif 173 239 3.6E-17 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 Hamap MF_00104 Ribonuclease 3 [rnc]. 19 236 30.32 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 19 239 1.0E-77 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 SUPERFAMILY SSF69065 13 161 6.98E-47 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 SMART SM00535 31 165 2.0E-50 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 Pfam PF14622 Ribonuclease-III-like 32 156 2.1E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 ProSitePatterns PS00517 Ribonuclease III family signature. 54 62 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 JO41_01395 940c2007ce4da04a639bb5f8a10038b9 241 SMART SM00358 173 240 6.6E-25 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain JO41_00215 8843142a04f87968c4104daba291d864 119 PIRSF PIRSF002191 1 119 7.5E-46 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00215 8843142a04f87968c4104daba291d864 119 Gene3D G3DSA:2.30.30.790 4 119 2.6E-14 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00215 8843142a04f87968c4104daba291d864 119 SUPERFAMILY SSF50104 3 116 3.61E-44 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO41_00215 8843142a04f87968c4104daba291d864 119 PRINTS PR00061 Ribosomal protein L19 signature 35 64 8.3E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00215 8843142a04f87968c4104daba291d864 119 PRINTS PR00061 Ribosomal protein L19 signature 89 114 8.3E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00215 8843142a04f87968c4104daba291d864 119 PRINTS PR00061 Ribosomal protein L19 signature 5 34 8.3E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00215 8843142a04f87968c4104daba291d864 119 Pfam PF01245 Ribosomal protein L19 4 113 4.5E-45 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00215 8843142a04f87968c4104daba291d864 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 30.032 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00215 8843142a04f87968c4104daba291d864 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 113 3.4E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_12630 6e7424404ffde52822ac3e320062e8b7 160 SUPERFAMILY SSF46785 3 54 1.85E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_12630 6e7424404ffde52822ac3e320062e8b7 160 Gene3D G3DSA:3.30.70.920 50 147 8.4E-20 T 14-10-2018 JO41_12630 6e7424404ffde52822ac3e320062e8b7 160 Pfam PF01037 Lrp/AsnC ligand binding domain 65 139 3.0E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JO41_12630 6e7424404ffde52822ac3e320062e8b7 160 SUPERFAMILY SSF54909 61 141 4.42E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JO41_12630 6e7424404ffde52822ac3e320062e8b7 160 Gene3D G3DSA:1.10.10.10 2 46 1.5E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_12630 6e7424404ffde52822ac3e320062e8b7 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 43 2.2E-9 T 14-10-2018 JO41_12630 6e7424404ffde52822ac3e320062e8b7 160 SMART SM00344 4 108 3.3E-8 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JO41_10580 676bb874accc44d5ffd9f84c68bbb45f 521 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 5 327 1.6E-84 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO41_10580 676bb874accc44d5ffd9f84c68bbb45f 521 Gene3D G3DSA:3.40.50.1700 385 519 7.0E-10 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 JO41_10580 676bb874accc44d5ffd9f84c68bbb45f 521 PRINTS PR00133 Glycosyl hydrolase family 3 signature 170 186 3.3E-5 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO41_10580 676bb874accc44d5ffd9f84c68bbb45f 521 PRINTS PR00133 Glycosyl hydrolase family 3 signature 247 265 3.3E-5 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO41_10580 676bb874accc44d5ffd9f84c68bbb45f 521 PRINTS PR00133 Glycosyl hydrolase family 3 signature 92 111 3.3E-5 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JO41_10580 676bb874accc44d5ffd9f84c68bbb45f 521 Gene3D G3DSA:3.20.20.300 1 334 2.5E-109 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JO41_10580 676bb874accc44d5ffd9f84c68bbb45f 521 SUPERFAMILY SSF51445 10 334 1.26E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_03170 732932e48d5c3f9dfa7095421d53e7ac 649 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 120 190 1.3E-7 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_03170 732932e48d5c3f9dfa7095421d53e7ac 649 SUPERFAMILY SSF55957 530 636 6.15E-5 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_03170 732932e48d5c3f9dfa7095421d53e7ac 649 Gene3D G3DSA:3.40.120.10 363 451 7.7E-8 T 14-10-2018 JO41_03170 732932e48d5c3f9dfa7095421d53e7ac 649 SUPERFAMILY SSF53738 11 191 2.33E-12 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_03170 732932e48d5c3f9dfa7095421d53e7ac 649 Gene3D G3DSA:3.40.120.10 265 362 7.7E-8 T 14-10-2018 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 Gene3D G3DSA:3.40.50.300 1 208 1.8E-73 T 14-10-2018 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 Pfam PF05191 Adenylate kinase, active site lid 122 157 3.8E-14 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 Pfam PF00406 Adenylate kinase 6 185 1.7E-48 T 14-10-2018 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 Hamap MF_00235 Adenylate kinase [adk]. 1 208 42.804 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 TIGRFAM TIGR01351 adk: adenylate kinase 2 205 3.3E-72 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 PRINTS PR00094 Adenylate kinase signature 81 97 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 PRINTS PR00094 Adenylate kinase signature 4 17 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 PRINTS PR00094 Adenylate kinase signature 32 46 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 PRINTS PR00094 Adenylate kinase signature 155 170 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 PRINTS PR00094 Adenylate kinase signature 172 186 2.1E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JO41_10730 969c196f2c1187884214f3b3562e96c9 211 SUPERFAMILY SSF52540 1 188 8.25E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02910 5c13962f33265dd3b3032817070656bf 77 Pfam PF05534 HicB family 3 35 1.3E-4 T 14-10-2018 IPR008651 Uncharacterised protein family HicB JO41_02910 5c13962f33265dd3b3032817070656bf 77 SUPERFAMILY SSF47598 1 43 1.17E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 Hamap MF_00069 Hydroxylamine reductase [hcp]. 4 543 22.348 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 Gene3D G3DSA:1.20.1270.20 139 222 8.9E-29 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 Gene3D G3DSA:1.20.1270.20 1 138 9.1E-36 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 PIRSF PIRSF000076 4 543 2.0E-246 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 4 541 1.6E-216 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 Gene3D G3DSA:3.40.50.2030 373 542 6.3E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 Gene3D G3DSA:3.40.50.2030 224 372 9.7E-67 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 Pfam PF03063 Prismane/CO dehydrogenase family 4 539 2.6E-166 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 JO41_03525 25f6b7d01f87d919d482c1c754a5ff61 543 SUPERFAMILY SSF56821 2 541 1.27E-196 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 JO41_05490 acc55306c6cb14b8c2d0ba3dd507d0d3 89 SUPERFAMILY SSF53167 11 86 1.45E-27 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JO41_05490 acc55306c6cb14b8c2d0ba3dd507d0d3 89 Gene3D G3DSA:3.40.50.1580 2 89 1.4E-28 T 14-10-2018 JO41_05490 acc55306c6cb14b8c2d0ba3dd507d0d3 89 Pfam PF01048 Phosphorylase superfamily 23 83 5.4E-10 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JO41_05490 acc55306c6cb14b8c2d0ba3dd507d0d3 89 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 69 84 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_11210 eff9c2b7edbc8bc90dd156d63a07c512 226 Gene3D G3DSA:3.40.1180.10 1 226 3.1E-87 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JO41_11210 eff9c2b7edbc8bc90dd156d63a07c512 226 Pfam PF01255 Putative undecaprenyl diphosphate synthase 9 223 5.6E-75 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JO41_11210 eff9c2b7edbc8bc90dd156d63a07c512 226 SUPERFAMILY SSF64005 4 218 1.57E-76 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JO41_11210 eff9c2b7edbc8bc90dd156d63a07c512 226 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 2 224 38.001 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JO41_11210 eff9c2b7edbc8bc90dd156d63a07c512 226 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 3 223 6.7E-77 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JO41_11210 eff9c2b7edbc8bc90dd156d63a07c512 226 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 169 186 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 JO41_03585 d3d49dc922b37d8a856068e691f3bc03 137 Gene3D G3DSA:1.20.120.50 1 134 2.8E-38 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO41_03585 d3d49dc922b37d8a856068e691f3bc03 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 7 131 4.0E-38 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JO41_03585 d3d49dc922b37d8a856068e691f3bc03 137 Pfam PF01814 Hemerythrin HHE cation binding domain 18 123 5.7E-12 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JO41_03585 d3d49dc922b37d8a856068e691f3bc03 137 ProSitePatterns PS00550 Hemerythrin family signature. 61 84 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 JO41_03585 d3d49dc922b37d8a856068e691f3bc03 137 SUPERFAMILY SSF47188 3 131 3.66E-34 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 TIGRFAM TIGR00277 HDIG: HDIG domain 254 316 1.9E-7 T 14-10-2018 IPR006675 HDIG domain JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 SUPERFAMILY SSF81891 144 446 5.89E-57 T 14-10-2018 JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 173 232 6.8E-15 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 Gene3D G3DSA:1.10.3090.10 147 438 2.9E-52 T 14-10-2018 JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 Pfam PF01743 Poly A polymerase head domain 25 145 1.4E-38 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 299 442 5.2E-17 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 Gene3D G3DSA:3.30.460.10 9 146 1.4E-47 T 14-10-2018 JO41_08020 9d7bf04b1b6cd7495ae0a9ccc8121ed9 455 SUPERFAMILY SSF81301 8 142 3.38E-41 T 14-10-2018 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 SMART SM00382 163 306 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 Pfam PF00158 Sigma-54 interaction domain 143 310 5.5E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 Gene3D G3DSA:3.40.50.300 128 313 6.4E-67 T 14-10-2018 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 6.2E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 Pfam PF00072 Response regulator receiver domain 5 112 3.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 Gene3D G3DSA:1.10.10.60 403 443 5.5E-14 T 14-10-2018 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 SUPERFAMILY SSF46689 356 445 1.04E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 Gene3D G3DSA:1.10.8.60 314 393 4.2E-27 T 14-10-2018 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 Gene3D G3DSA:3.40.50.2300 4 122 7.4E-38 T 14-10-2018 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 SMART SM00448 3 114 4.5E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 1.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 1.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 SUPERFAMILY SSF52172 3 188 4.13E-49 T 14-10-2018 IPR011006 CheY-like superfamily JO41_11960 ef8ca01d90d05fd4e0f57973af7d855c 458 SUPERFAMILY SSF52540 142 386 2.56E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06350 3b048715e57fbd7ed25b3317753002c9 117 SUPERFAMILY SSF51182 8 103 1.53E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO41_06350 3b048715e57fbd7ed25b3317753002c9 117 Gene3D G3DSA:2.60.120.10 3 107 9.7E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_06350 3b048715e57fbd7ed25b3317753002c9 117 Pfam PF07883 Cupin domain 31 98 2.6E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel JO41_12555 cc26651622837935ecc98dec71472c6f 179 Pfam PF02632 BioY family 25 171 8.9E-35 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 JO41_12555 cc26651622837935ecc98dec71472c6f 179 PIRSF PIRSF016661 1 179 3.2E-41 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 JO41_12555 cc26651622837935ecc98dec71472c6f 179 Gene3D G3DSA:1.10.1760.20 1 177 2.2E-47 T 14-10-2018 JO41_10150 6173812daa32b9d3e8d0e51851dd38eb 180 Gene3D G3DSA:1.10.1740.10 8 88 2.5E-11 T 14-10-2018 JO41_10150 6173812daa32b9d3e8d0e51851dd38eb 180 Pfam PF04542 Sigma-70 region 2 20 84 1.2E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO41_10150 6173812daa32b9d3e8d0e51851dd38eb 180 SUPERFAMILY SSF88946 14 98 5.89E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO41_10150 6173812daa32b9d3e8d0e51851dd38eb 180 Pfam PF08281 Sigma-70, region 4 116 167 4.5E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO41_10150 6173812daa32b9d3e8d0e51851dd38eb 180 Gene3D G3DSA:1.10.10.10 108 172 8.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_10150 6173812daa32b9d3e8d0e51851dd38eb 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 170 3.5E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO41_10150 6173812daa32b9d3e8d0e51851dd38eb 180 SUPERFAMILY SSF88659 109 172 2.99E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 8 513 2.0E-216 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 Gene3D G3DSA:1.10.3210.10 305 464 1.4E-18 T 14-10-2018 JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 SUPERFAMILY SSF109604 311 463 3.14E-29 T 14-10-2018 JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 SMART SM00322 201 268 2.9E-9 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 SUPERFAMILY SSF54791 204 297 5.89E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 Pfam PF01966 HD domain 329 421 1.9E-19 T 14-10-2018 IPR006674 HD domain JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 SMART SM00471 325 431 3.9E-13 T 14-10-2018 IPR003607 HD/PDEase domain JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 TIGRFAM TIGR00277 HDIG: HDIG domain 325 402 4.8E-25 T 14-10-2018 IPR006675 HDIG domain JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 Pfam PF12072 Domain of unknown function (DUF3552) 6 197 2.4E-46 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 Hamap MF_00335 Ribonuclease Y [rny]. 5 513 23.894 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 Gene3D G3DSA:3.30.1370.10 198 296 5.2E-9 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JO41_03005 e781c10c4c7aa3be8d877bc29c8bc36e 513 Pfam PF00013 KH domain 206 258 7.4E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 JO41_06745 8ab8404626fa7e2dd87507edd6820f6b 192 Pfam PF04205 FMN-binding domain 98 173 9.2E-9 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO41_06745 8ab8404626fa7e2dd87507edd6820f6b 192 SMART SM00900 94 176 2.2E-8 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JO41_12620 deaae6abdd744a66fcb2f0f902820805 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 268 1.6E-54 T 14-10-2018 IPR000150 Cof family GO:0016787 JO41_12620 deaae6abdd744a66fcb2f0f902820805 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 240 3.9E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JO41_12620 deaae6abdd744a66fcb2f0f902820805 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 268 7.4E-58 T 14-10-2018 JO41_12620 deaae6abdd744a66fcb2f0f902820805 273 SUPERFAMILY SSF56784 3 272 1.01E-66 T 14-10-2018 IPR036412 HAD-like superfamily JO41_12620 deaae6abdd744a66fcb2f0f902820805 273 Gene3D G3DSA:3.40.50.1000 9 269 1.5E-65 T 14-10-2018 IPR023214 HAD superfamily JO41_12620 deaae6abdd744a66fcb2f0f902820805 273 Gene3D G3DSA:3.30.1240.10 91 196 1.5E-65 T 14-10-2018 JO41_12620 deaae6abdd744a66fcb2f0f902820805 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 14-10-2018 JO41_11250 d6102d56489cb61b37b3c3ab77d59639 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 256 6.0E-67 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JO41_11250 d6102d56489cb61b37b3c3ab77d59639 261 Gene3D G3DSA:2.50.20.10 23 257 6.4E-82 T 14-10-2018 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 PIRSF PIRSF000106 3 469 6.4E-99 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 SUPERFAMILY SSF53223 39 203 8.63E-42 T 14-10-2018 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 PRINTS PR00072 Malic enzyme signature 91 120 1.0E-5 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 PRINTS PR00072 Malic enzyme signature 328 344 1.0E-5 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 PRINTS PR00072 Malic enzyme signature 232 248 1.0E-5 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 SMART SM01274 44 193 1.0E-45 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 Pfam PF00390 Malic enzyme, N-terminal domain 62 193 4.5E-18 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 SMART SM00919 205 436 2.9E-91 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 Gene3D G3DSA:3.40.50.10380 1 202 1.4E-63 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 SUPERFAMILY SSF51735 206 482 1.06E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 Gene3D G3DSA:3.40.50.720 203 496 1.3E-101 T 14-10-2018 JO41_06435 6a4c5715f4b65affb4d1aea458ecb9b0 499 Pfam PF03949 Malic enzyme, NAD binding domain 206 420 3.6E-22 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JO41_08075 331e69c59f43ebfe62bcbf1f48899049 135 Gene3D G3DSA:1.20.120.520 3 134 6.1E-6 T 14-10-2018 JO41_08075 331e69c59f43ebfe62bcbf1f48899049 135 Pfam PF01814 Hemerythrin HHE cation binding domain 5 132 1.6E-8 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JO41_01480 ba075cb2e8c66fc73323dfd84018aa36 190 SUPERFAMILY SSF56281 1 184 7.72E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_01480 ba075cb2e8c66fc73323dfd84018aa36 190 SMART SM00849 12 170 4.8E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_01480 ba075cb2e8c66fc73323dfd84018aa36 190 Gene3D G3DSA:3.60.15.10 2 189 9.5E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_11610 558dd3b53ddbd74796085bcf367f7526 515 SUPERFAMILY SSF52540 300 455 1.06E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11610 558dd3b53ddbd74796085bcf367f7526 515 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 310 431 2.7E-27 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_11610 558dd3b53ddbd74796085bcf367f7526 515 SMART SM00382 306 435 7.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11610 558dd3b53ddbd74796085bcf367f7526 515 Gene3D G3DSA:3.40.50.300 279 450 1.1E-38 T 14-10-2018 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 SMART SM00533 298 608 1.7E-82 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 SMART SM00534 630 815 1.5E-109 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 PIRSF PIRSF037677 2 865 3.7E-158 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Pfam PF05190 MutS family domain IV 445 534 1.6E-23 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 874 1.8E-254 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 SUPERFAMILY SSF52540 584 815 1.75E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Pfam PF05188 MutS domain II 122 266 5.2E-20 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 SUPERFAMILY SSF53150 113 294 1.7E-33 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Gene3D G3DSA:1.10.1420.10 415 552 1.7E-78 T 14-10-2018 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Gene3D G3DSA:3.40.50.300 585 875 1.7E-91 T 14-10-2018 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Pfam PF01624 MutS domain I 8 113 1.6E-36 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Pfam PF05192 MutS domain III 283 576 5.3E-33 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 711 727 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Pfam PF00488 MutS domain V 634 815 6.0E-78 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Gene3D G3DSA:1.10.1420.10 280 576 1.7E-78 T 14-10-2018 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Gene3D G3DSA:3.40.1170.10 1 115 1.3E-39 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 SUPERFAMILY SSF55271 3 109 3.01E-35 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 SUPERFAMILY SSF48334 281 580 2.22E-72 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 868 22.663 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 JO41_02320 9afe8edaa6efb28584cfd20f11e3f160 881 Gene3D G3DSA:3.30.420.110 121 276 1.1E-31 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 JO41_05070 c4c360ceb5542f87b9d489b4ea2675fa 341 Pfam PF01066 CDP-alcohol phosphatidyltransferase 37 106 4.9E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO41_05070 c4c360ceb5542f87b9d489b4ea2675fa 341 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 84 106 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO41_05070 c4c360ceb5542f87b9d489b4ea2675fa 341 Gene3D G3DSA:1.20.120.1760 11 218 5.7E-17 T 14-10-2018 JO41_07505 c5b941e59290fc87b7be6d86c6a90c61 129 PRINTS PR00502 NUDIX hydrolase family signature 30 44 4.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO41_07505 c5b941e59290fc87b7be6d86c6a90c61 129 PRINTS PR00502 NUDIX hydrolase family signature 44 59 4.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO41_07505 c5b941e59290fc87b7be6d86c6a90c61 129 Pfam PF00293 NUDIX domain 4 123 7.4E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JO41_07505 c5b941e59290fc87b7be6d86c6a90c61 129 Gene3D G3DSA:3.90.79.10 1 127 1.0E-30 T 14-10-2018 JO41_07505 c5b941e59290fc87b7be6d86c6a90c61 129 SUPERFAMILY SSF55811 2 127 8.67E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 SUPERFAMILY SSF52540 6 216 1.95E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 Gene3D G3DSA:3.40.50.300 1 182 1.1E-37 T 14-10-2018 JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 277 1.0E-69 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 Gene3D G3DSA:3.30.300.20 183 294 2.4E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 159 1.4E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 SUPERFAMILY SSF54814 178 291 2.22E-30 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 Hamap MF_00367 GTPase Era [era]. 1 294 29.54 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 Pfam PF07650 KH domain 205 283 1.5E-14 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_06765 aeccd31fbec491ad044657d40d5950c2 295 Pfam PF01926 50S ribosome-binding GTPase 6 119 1.2E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_10905 5b615237bd38982dc36b934c21a24da8 287 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 23 281 3.5E-76 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JO41_10905 5b615237bd38982dc36b934c21a24da8 287 Gene3D G3DSA:1.10.8.100 212 284 6.4E-17 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 JO41_10905 5b615237bd38982dc36b934c21a24da8 287 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 21 283 46.582 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JO41_10905 5b615237bd38982dc36b934c21a24da8 287 SMART SM00650 37 208 1.6E-59 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 JO41_10905 5b615237bd38982dc36b934c21a24da8 287 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 53 80 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 JO41_10905 5b615237bd38982dc36b934c21a24da8 287 Gene3D G3DSA:3.40.50.150 3 211 5.2E-56 T 14-10-2018 JO41_10905 5b615237bd38982dc36b934c21a24da8 287 Pfam PF00398 Ribosomal RNA adenine dimethylase 23 276 3.0E-45 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JO41_10905 5b615237bd38982dc36b934c21a24da8 287 SUPERFAMILY SSF53335 20 282 1.11E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_07775 479ec056cae3595ddf16e1077ec94fa6 62 Gene3D G3DSA:3.40.50.12110 3 56 3.4E-6 T 14-10-2018 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 Gene3D G3DSA:1.20.58.410 604 674 1.3E-5 T 14-10-2018 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 Pfam PF12848 ABC transporter 232 314 4.6E-24 T 14-10-2018 IPR032781 ABC-transporter extension domain JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 SMART SM00382 28 239 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 SMART SM00382 351 518 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 Pfam PF00005 ABC transporter 19 192 6.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 Gene3D G3DSA:3.40.50.300 3 286 1.6E-58 T 14-10-2018 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 Gene3D G3DSA:3.40.50.300 290 554 4.9E-55 T 14-10-2018 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 SUPERFAMILY SSF52540 3 270 6.1E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 Pfam PF00005 ABC transporter 342 473 3.7E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 SUPERFAMILY SSF52540 305 518 2.19E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01550 8e5bad45f59e3d9d6d09cad1c26bf14b 675 Pfam PF16326 ABC transporter C-terminal domain 606 670 3.0E-9 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 Gene3D G3DSA:3.30.365.10 134 361 3.8E-91 T 14-10-2018 JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 17 132 3.4E-25 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 SMART SM01008 17 133 3.1E-33 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 Gene3D G3DSA:3.30.365.10 373 751 6.1E-117 T 14-10-2018 JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 SUPERFAMILY SSF56003 136 756 1.03E-170 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 SUPERFAMILY SSF54665 2 155 5.36E-40 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 Gene3D G3DSA:3.30.365.10 455 611 6.1E-117 T 14-10-2018 JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 149 696 9.7E-155 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 Gene3D G3DSA:3.90.1170.50 32 133 3.8E-91 T 14-10-2018 JO41_07585 db93f4e9498871cb3f1c2dd5c4c6798f 765 Gene3D G3DSA:3.30.365.10 15 284 3.8E-91 T 14-10-2018 JO41_12880 4f95fe09877fdcc5261e7bf41aaea633 111 Pfam PF10665 Minor capsid protein 5 109 2.0E-18 T 14-10-2018 IPR019612 Minor capsid protein, putative JO41_08165 4f95fe09877fdcc5261e7bf41aaea633 111 Pfam PF10665 Minor capsid protein 5 109 2.0E-18 T 14-10-2018 IPR019612 Minor capsid protein, putative JO41_04220 215afc130842a1ef19902b9277e28171 387 SUPERFAMILY SSF55031 186 296 1.64E-13 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO41_04220 215afc130842a1ef19902b9277e28171 387 SUPERFAMILY SSF53187 10 385 4.19E-58 T 14-10-2018 JO41_04220 215afc130842a1ef19902b9277e28171 387 Gene3D G3DSA:3.30.70.360 186 306 4.2E-80 T 14-10-2018 JO41_04220 215afc130842a1ef19902b9277e28171 387 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 21 376 7.5E-71 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase JO41_04220 215afc130842a1ef19902b9277e28171 387 Gene3D G3DSA:3.40.630.10 27 386 4.2E-80 T 14-10-2018 JO41_04220 215afc130842a1ef19902b9277e28171 387 Pfam PF01546 Peptidase family M20/M25/M40 77 384 2.0E-39 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO41_04220 215afc130842a1ef19902b9277e28171 387 Pfam PF07687 Peptidase dimerisation domain 186 286 1.0E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 SUPERFAMILY SSF54534 814 887 4.45E-16 T 14-10-2018 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 SUPERFAMILY SSF46557 738 811 8.76E-18 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 SUPERFAMILY SSF48452 118 312 8.82E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 Pfam PF03449 Transcription elongation factor, N-terminal 738 807 1.6E-17 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 853 869 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 Gene3D G3DSA:1.10.287.180 736 808 5.6E-17 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 Gene3D G3DSA:3.10.50.30 809 891 9.4E-19 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 750 781 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 739 887 1.8E-46 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 815 888 2.2E-21 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JO41_00070 9ef22e7dd01503cfad296db7fdd6a697 893 Hamap MF_00105 Transcription elongation factor GreA [greA]. 735 888 26.009 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 JO41_07865 c5b17bccd11a40cd48dd7a7185e67cc1 291 Gene3D G3DSA:3.40.50.720 1 174 2.9E-26 T 14-10-2018 JO41_07865 c5b17bccd11a40cd48dd7a7185e67cc1 291 SUPERFAMILY SSF51735 1 102 2.96E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_07865 c5b17bccd11a40cd48dd7a7185e67cc1 291 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 118 2.6E-18 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain JO41_03770 867666a0c9847d9e200c905ed4afff7b 198 Pfam PF02559 CarD-like/TRCF domain 6 113 1.2E-10 T 14-10-2018 IPR003711 CarD-like/TRCF domain JO41_03770 867666a0c9847d9e200c905ed4afff7b 198 Gene3D G3DSA:2.30.30.840 1 66 1.6E-21 T 14-10-2018 JO41_03770 867666a0c9847d9e200c905ed4afff7b 198 SMART SM01058 5 115 1.3E-19 T 14-10-2018 IPR003711 CarD-like/TRCF domain JO41_03770 867666a0c9847d9e200c905ed4afff7b 198 SUPERFAMILY SSF141259 5 70 8.11E-10 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily JO41_03770 867666a0c9847d9e200c905ed4afff7b 198 Gene3D G3DSA:1.20.58.1290 67 164 1.6E-21 T 14-10-2018 JO41_04960 d1729ed5f7aba4b0ae3f31d7bb4a0f71 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 8 196 2.1E-53 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_04960 d1729ed5f7aba4b0ae3f31d7bb4a0f71 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 11 196 6.0E-40 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 Pfam PF14520 Helix-hairpin-helix domain 72 129 3.7E-17 T 14-10-2018 JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 SUPERFAMILY SSF47781 66 135 9.18E-19 T 14-10-2018 IPR010994 RuvA domain 2-like JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 Gene3D G3DSA:1.10.150.20 67 139 4.8E-24 T 14-10-2018 JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 27.429 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 SUPERFAMILY SSF46929 149 200 5.76E-6 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 Gene3D G3DSA:2.40.50.140 1 65 1.6E-15 T 14-10-2018 JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 SUPERFAMILY SSF50249 1 63 1.03E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 SMART SM00278 108 127 0.019 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 SMART SM00278 73 92 0.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 177 8.3E-45 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JO41_11730 52cde6e6da7695e4685c8c53c5396992 202 Pfam PF01330 RuvA N terminal domain 1 62 2.5E-15 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 SUPERFAMILY SSF58104 334 647 2.88E-47 T 14-10-2018 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 Gene3D G3DSA:1.20.1480.50 277 371 4.4E-9 T 14-10-2018 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 Pfam PF02743 Cache domain 104 274 2.7E-22 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 624 2.1E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 Gene3D G3DSA:3.30.450.20 146 276 4.8E-18 T 14-10-2018 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 SMART SM00304 312 366 3.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 4.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 4.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 584 613 4.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 4.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 Gene3D G3DSA:1.10.287.950 410 650 3.3E-46 T 14-10-2018 JO41_09770 95d25ffa1f497ee127fee3a7401adfce 699 SMART SM00283 409 656 1.2E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_01965 d4bbc12dfbdcd2a249aef9d130b528be 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 453 1.6E-94 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO41_01965 d4bbc12dfbdcd2a249aef9d130b528be 533 SUPERFAMILY SSF53850 37 521 6.72E-138 T 14-10-2018 JO41_01965 d4bbc12dfbdcd2a249aef9d130b528be 533 Gene3D G3DSA:3.40.190.10 41 509 5.5E-176 T 14-10-2018 JO41_01965 d4bbc12dfbdcd2a249aef9d130b528be 533 Gene3D G3DSA:3.90.76.10 70 193 5.5E-176 T 14-10-2018 JO41_01965 d4bbc12dfbdcd2a249aef9d130b528be 533 PIRSF PIRSF002741 1 526 1.6E-117 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO41_01965 d4bbc12dfbdcd2a249aef9d130b528be 533 Gene3D G3DSA:3.10.105.10 293 503 5.5E-176 T 14-10-2018 JO41_05560 1266a57851975261cf623b2a14d65b33 489 Gene3D G3DSA:1.10.510.10 6 281 4.2E-14 T 14-10-2018 JO41_05560 1266a57851975261cf623b2a14d65b33 489 SMART SM00220 18 334 0.0012 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JO41_05560 1266a57851975261cf623b2a14d65b33 489 Pfam PF00069 Protein kinase domain 20 259 9.8E-9 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JO41_05560 1266a57851975261cf623b2a14d65b33 489 SUPERFAMILY SSF56112 17 253 9.27E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JO41_03100 83c31b7c1c8ee38cba68721a7fa3aef6 375 SUPERFAMILY SSF53756 88 277 2.83E-11 T 14-10-2018 JO41_03100 83c31b7c1c8ee38cba68721a7fa3aef6 375 Gene3D G3DSA:3.40.50.2000 185 355 3.0E-7 T 14-10-2018 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 SUPERFAMILY SSF54862 132 187 7.98E-15 T 14-10-2018 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 Gene3D G3DSA:3.20.20.20 35 99 1.4E-12 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 SUPERFAMILY SSF54862 199 279 4.04E-14 T 14-10-2018 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 Pfam PF13187 4Fe-4S dicluster domain 217 259 7.0E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 Pfam PF12838 4Fe-4S dicluster domain 140 182 7.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 217 228 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 192 26.82 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 Pfam PF04060 Putative Fe-S cluster 44 75 2.3E-13 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 Gene3D G3DSA:3.30.70.20 133 193 5.7E-14 T 14-10-2018 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 Gene3D G3DSA:3.30.70.20 199 267 4.0E-12 T 14-10-2018 JO41_06760 3f2359daa3d18f35646baa0ff9d31252 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 247 4.9E-56 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 SUPERFAMILY SSF53901 1 252 1.73E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 4.8E-37 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 Gene3D G3DSA:3.40.47.10 257 403 1.9E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 412 9.1E-167 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 PIRSF PIRSF000447 1 415 2.8E-156 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 Gene3D G3DSA:3.40.47.10 1 255 1.7E-85 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 SMART SM00825 Beta-ketoacyl synthase 4 405 2.7E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JO41_03835 a86dff6fd618cefc0db43ea06a95d31d 415 SUPERFAMILY SSF53901 215 414 2.97E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 Pfam PF00571 CBS domain 272 320 5.2E-6 T 14-10-2018 IPR000644 CBS domain JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 Pfam PF00571 CBS domain 205 260 2.8E-6 T 14-10-2018 IPR000644 CBS domain JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 Pfam PF01595 Domain of unknown function DUF21 10 185 1.6E-41 T 14-10-2018 IPR002550 CNNM, transmembrane domain JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 SUPERFAMILY SSF54631 197 331 1.89E-24 T 14-10-2018 JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 Gene3D G3DSA:3.10.580.10 183 330 5.8E-38 T 14-10-2018 JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 SUPERFAMILY SSF56176 344 413 3.27E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 SMART SM01091 340 418 1.4E-11 T 14-10-2018 IPR005170 Transporter-associated domain JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 Gene3D G3DSA:3.30.465.10 331 415 2.8E-17 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO41_04160 1b64358978d5d60a08c27992ceb6c4c2 420 Pfam PF03471 Transporter associated domain 346 415 1.3E-15 T 14-10-2018 IPR005170 Transporter-associated domain JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 1.2E-8 T 14-10-2018 JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.2E-8 T 14-10-2018 JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 PRINTS PR00173 Glutamate-aspartate symporter signature 279 305 1.2E-8 T 14-10-2018 JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 PRINTS PR00173 Glutamate-aspartate symporter signature 342 362 1.2E-8 T 14-10-2018 JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.2E-8 T 14-10-2018 JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 Pfam PF00375 Sodium:dicarboxylate symporter family 8 387 4.9E-75 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 Gene3D G3DSA:1.10.3860.10 2 392 5.7E-50 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_03180 61d57f6e00b52d1fbde05c8710b2e44d 395 SUPERFAMILY SSF118215 8 386 2.09E-77 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 Pfam PF00710 Asparaginase, N-terminal 476 636 2.2E-25 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 Gene3D G3DSA:1.10.10.410 411 474 3.7E-14 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 Pfam PF02934 GatB/GatE catalytic domain 14 265 9.0E-31 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 553 563 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 Gene3D G3DSA:3.40.50.1170 475 658 2.7E-29 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 SMART SM00845 324 471 4.7E-28 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 Pfam PF02637 GatB domain 324 471 2.9E-29 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 SMART SM00870 475 787 6.9E-10 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 Gene3D G3DSA:1.10.150.380 293 409 1.0E-17 T 14-10-2018 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 PRINTS PR00139 Asparaginase/glutaminase family signature 476 487 1.8E-6 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 PRINTS PR00139 Asparaginase/glutaminase family signature 552 570 1.8E-6 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 SUPERFAMILY SSF55931 14 261 2.68E-35 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 SUPERFAMILY SSF53774 476 793 9.03E-35 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 Gene3D G3DSA:3.40.50.40 674 798 1.6E-10 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 JO41_04265 5f4d42e721f3ea197bba149bd3cefdbb 800 SUPERFAMILY SSF89095 297 399 9.42E-17 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 142 2.2E-59 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 Gene3D G3DSA:3.30.1550.10 3 73 6.3E-31 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 SUPERFAMILY SSF46906 69 142 5.36E-24 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 143 29.674 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 1.4E-20 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 Gene3D G3DSA:1.10.10.250 74 142 5.0E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 68 3.7E-28 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 SMART SM00649 10 142 1.6E-78 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 SUPERFAMILY SSF54747 4 74 2.62E-28 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 39 75 1.0E-14 T 14-10-2018 JO41_01810 4ac5eedf389ec5441f6fd152f2960f65 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_12580 fc70d504ed532f777b0cda0c182fc0b6 108 SUPERFAMILY SSF52091 4 106 5.69E-19 T 14-10-2018 IPR036513 STAS domain superfamily JO41_12580 fc70d504ed532f777b0cda0c182fc0b6 108 Pfam PF01740 STAS domain 11 105 8.3E-12 T 14-10-2018 IPR002645 STAS domain JO41_12580 fc70d504ed532f777b0cda0c182fc0b6 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 3 106 4.3E-16 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 JO41_12580 fc70d504ed532f777b0cda0c182fc0b6 108 Gene3D G3DSA:3.30.750.24 1 106 4.3E-19 T 14-10-2018 IPR036513 STAS domain superfamily JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 SUPERFAMILY SSF53448 64 267 3.38E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 Gene3D G3DSA:3.30.200.20 289 384 8.7E-25 T 14-10-2018 JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 PIRSF PIRSF037383 1 583 2.6E-238 T 14-10-2018 IPR017190 Bifunctional CTP:phosphocholine cytidylyltransferase/choline kinase JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 Gene3D G3DSA:3.90.1200.10 385 585 7.8E-51 T 14-10-2018 JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 Gene3D G3DSA:3.90.550.10 64 288 2.6E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 Pfam PF12804 MobA-like NTP transferase domain 65 158 3.6E-11 T 14-10-2018 IPR025877 MobA-like NTP transferase JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 Pfam PF01633 Choline/ethanolamine kinase 331 504 2.5E-16 T 14-10-2018 JO41_04715 cd295510dc90b88f3822ba4feffc5cd1 593 SUPERFAMILY SSF56112 293 574 7.0E-39 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 Hamap MF_00246 Galactokinase [galK]. 42 403 41.198 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 SUPERFAMILY SSF55060 222 403 1.44E-51 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 Pfam PF00288 GHMP kinases N terminal domain 134 198 2.9E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00473 Galactokinase signature 108 119 3.6E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00473 Galactokinase signature 129 147 3.6E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00473 Galactokinase signature 286 300 3.6E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00473 Galactokinase signature 44 62 3.6E-20 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 Gene3D G3DSA:3.30.70.890 219 378 8.3E-122 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 TIGRFAM TIGR00131 gal_kin: galactokinase 21 403 9.8E-95 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00959 Mevalonate kinase family signature 42 66 2.2E-37 T 14-10-2018 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00959 Mevalonate kinase family signature 179 198 2.2E-37 T 14-10-2018 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00959 Mevalonate kinase family signature 350 367 2.2E-37 T 14-10-2018 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PRINTS PR00959 Mevalonate kinase family signature 136 158 2.2E-37 T 14-10-2018 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 PIRSF PIRSF000530 8 404 2.6E-116 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 Gene3D G3DSA:3.30.230.10 39 218 8.3E-122 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 Pfam PF08544 GHMP kinases C terminal 302 381 1.8E-11 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 SUPERFAMILY SSF54211 16 218 1.06E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_04155 78a98d2be245b4f584fda1e85ba7851f 404 Pfam PF10509 Galactokinase galactose-binding signature 25 74 1.7E-17 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 Pfam PF00664 ABC transporter transmembrane region 27 297 3.3E-28 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 SUPERFAMILY SSF90123 13 329 3.66E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 Pfam PF00005 ABC transporter 355 504 4.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 Gene3D G3DSA:1.20.1560.10 1 328 4.8E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 SMART SM00382 364 550 2.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 SUPERFAMILY SSF52540 335 573 2.17E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09330 e546d41440130c3af3e7e0cc42d324ad 581 Gene3D G3DSA:3.40.50.300 332 581 7.1E-87 T 14-10-2018 JO41_03855 09532cf1761693a360d8c6b79402f812 397 Gene3D G3DSA:3.40.50.300 1 208 3.6E-56 T 14-10-2018 JO41_03855 09532cf1761693a360d8c6b79402f812 397 Pfam PF00271 Helicase conserved C-terminal domain 247 352 2.4E-22 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_03855 09532cf1761693a360d8c6b79402f812 397 SMART SM00487 21 229 1.2E-39 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_03855 09532cf1761693a360d8c6b79402f812 397 SUPERFAMILY SSF52540 32 361 6.8E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03855 09532cf1761693a360d8c6b79402f812 397 Pfam PF00270 DEAD/DEAH box helicase 26 196 1.5E-40 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_03855 09532cf1761693a360d8c6b79402f812 397 SMART SM00490 271 352 8.0E-26 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_03855 09532cf1761693a360d8c6b79402f812 397 Gene3D G3DSA:3.40.50.300 230 396 1.3E-37 T 14-10-2018 JO41_10780 6c349283f52724e1151c705ea7b31d80 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JO41_10780 6c349283f52724e1151c705ea7b31d80 216 SUPERFAMILY SSF46689 2 73 4.93E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_10780 6c349283f52724e1151c705ea7b31d80 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.9E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_10780 6c349283f52724e1151c705ea7b31d80 216 Gene3D G3DSA:1.10.357.10 3 202 2.5E-23 T 14-10-2018 JO41_10780 6c349283f52724e1151c705ea7b31d80 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_10780 6c349283f52724e1151c705ea7b31d80 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_11535 45ca236c86b712232e114ddc1c6386c9 205 Gene3D G3DSA:3.40.50.1470 1 195 2.5E-55 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JO41_11535 45ca236c86b712232e114ddc1c6386c9 205 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 183 9.4E-45 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JO41_11535 45ca236c86b712232e114ddc1c6386c9 205 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 188 30.488 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JO41_11535 45ca236c86b712232e114ddc1c6386c9 205 SUPERFAMILY SSF53178 2 185 1.31E-51 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JO41_11535 45ca236c86b712232e114ddc1c6386c9 205 Pfam PF01195 Peptidyl-tRNA hydrolase 4 184 5.5E-46 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JO41_11535 45ca236c86b712232e114ddc1c6386c9 205 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 Gene3D G3DSA:3.40.50.300 259 490 1.5E-53 T 14-10-2018 JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 Pfam PF00005 ABC transporter 18 169 2.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 SUPERFAMILY SSF52540 254 473 1.63E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 Gene3D G3DSA:3.40.50.300 1 243 1.7E-57 T 14-10-2018 JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 SMART SM00382 27 217 8.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 SMART SM00382 288 465 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 Pfam PF00005 ABC transporter 279 418 9.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 SUPERFAMILY SSF52540 2 232 5.96E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04950 69b893b45c61ec1b41241cf90015c3cb 491 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_01450 9c6505ee28223901434610f6ec66fc02 615 Gene3D G3DSA:1.10.287.950 351 569 1.2E-40 T 14-10-2018 JO41_01450 9c6505ee28223901434610f6ec66fc02 615 Gene3D G3DSA:1.10.287.950 229 348 1.1E-7 T 14-10-2018 JO41_01450 9c6505ee28223901434610f6ec66fc02 615 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 394 540 2.0E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_01450 9c6505ee28223901434610f6ec66fc02 615 SMART SM00283 325 572 4.0E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_01450 9c6505ee28223901434610f6ec66fc02 615 SUPERFAMILY SSF58104 352 569 1.7E-40 T 14-10-2018 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Gene3D G3DSA:3.30.70.240 595 666 2.0E-84 T 14-10-2018 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 SUPERFAMILY SSF54980 594 682 2.01E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Pfam PF03764 Elongation factor G, domain IV 470 588 4.7E-43 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Gene3D G3DSA:2.40.30.10 283 401 1.1E-27 T 14-10-2018 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 PRINTS PR00315 GTP-binding elongation factor signature 128 137 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 PRINTS PR00315 GTP-binding elongation factor signature 10 23 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 PRINTS PR00315 GTP-binding elongation factor signature 76 86 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 PRINTS PR00315 GTP-binding elongation factor signature 56 64 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 SUPERFAMILY SSF54980 396 472 9.71E-14 T 14-10-2018 IPR035647 EF-G domain III/V-like JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Pfam PF14492 Elongation Factor G, domain II 396 467 1.4E-21 T 14-10-2018 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 SMART SM00889 471 589 2.1E-65 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 176 2.3E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Gene3D G3DSA:3.40.50.300 3 280 2.2E-72 T 14-10-2018 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 SUPERFAMILY SSF54211 470 590 6.83E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Gene3D G3DSA:3.30.230.10 475 679 2.0E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Gene3D G3DSA:3.30.70.870 402 474 3.0E-16 T 14-10-2018 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 SUPERFAMILY SSF50447 259 386 7.07E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 SMART SM00838 591 679 3.3E-27 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Pfam PF00009 Elongation factor Tu GTP binding domain 6 276 5.7E-44 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 Pfam PF00679 Elongation factor G C-terminus 591 678 6.7E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JO41_12490 46c7fc7605f9824e881f60102b0ffba3 692 SUPERFAMILY SSF52540 4 276 9.42E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10900 5ba34d5def7fdac5964d33bd706388c0 296 SUPERFAMILY SSF54637 3 165 4.98E-22 T 14-10-2018 IPR029069 HotDog domain superfamily JO41_10900 5ba34d5def7fdac5964d33bd706388c0 296 Pfam PF01643 Acyl-ACP thioesterase 132 278 1.3E-15 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 JO41_10900 5ba34d5def7fdac5964d33bd706388c0 296 Pfam PF01643 Acyl-ACP thioesterase 5 105 6.8E-14 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 JO41_10900 5ba34d5def7fdac5964d33bd706388c0 296 SUPERFAMILY SSF54637 179 277 3.85E-15 T 14-10-2018 IPR029069 HotDog domain superfamily JO41_03215 105e31fe0167b04ed8daed8976f50f99 272 SUPERFAMILY SSF141371 172 231 5.69E-5 T 14-10-2018 JO41_03215 105e31fe0167b04ed8daed8976f50f99 272 Pfam PF07238 PilZ domain 180 241 1.3E-5 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 330 3.6E-25 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 299 1.6E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 SUPERFAMILY SSF52283 2 138 9.99E-35 T 14-10-2018 JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 Gene3D G3DSA:3.40.50.720 103 299 6.8E-123 T 14-10-2018 JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 Gene3D G3DSA:3.40.50.720 2 321 6.8E-123 T 14-10-2018 JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 SUPERFAMILY SSF51735 103 301 1.54E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_09860 31cde440ac7c7c06f8109261e7c08db1 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JO41_11090 e8ffdf4ee81920b44bd518a4930bd766 200 Pfam PF00156 Phosphoribosyl transferase domain 16 131 3.5E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO41_11090 e8ffdf4ee81920b44bd518a4930bd766 200 SUPERFAMILY SSF53271 2 156 8.24E-20 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO41_11090 e8ffdf4ee81920b44bd518a4930bd766 200 Gene3D G3DSA:3.40.50.2020 1 187 3.8E-26 T 14-10-2018 JO41_05795 482c495ec83b18bd8ff479a360b477b6 396 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 395 3.0E-181 T 14-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type JO41_05795 482c495ec83b18bd8ff479a360b477b6 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JO41_05795 482c495ec83b18bd8ff479a360b477b6 396 Gene3D G3DSA:3.90.1150.10 38 386 4.0E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_05795 482c495ec83b18bd8ff479a360b477b6 396 Pfam PF00155 Aminotransferase class I and II 42 383 1.3E-65 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO41_05795 482c495ec83b18bd8ff479a360b477b6 396 SUPERFAMILY SSF53383 7 394 6.99E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_05795 482c495ec83b18bd8ff479a360b477b6 396 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 25 383 5.5E-131 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 JO41_05795 482c495ec83b18bd8ff479a360b477b6 396 Gene3D G3DSA:3.40.640.10 58 293 4.0E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_09570 31d498fba1ca6644f79901379833faa8 403 Gene3D G3DSA:3.40.50.2300 72 254 4.4E-32 T 14-10-2018 JO41_09570 31d498fba1ca6644f79901379833faa8 403 Pfam PF13407 Periplasmic binding protein domain 39 260 9.0E-27 T 14-10-2018 IPR025997 Periplasmic binding protein JO41_09570 31d498fba1ca6644f79901379833faa8 403 SUPERFAMILY SSF53822 35 271 4.28E-32 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 SUPERFAMILY SSF54686 3 133 3.27E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 PRINTS PR00060 Ribosomal protein L16 signature 89 118 1.4E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 PRINTS PR00060 Ribosomal protein L16 signature 25 37 1.4E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 PRINTS PR00060 Ribosomal protein L16 signature 59 88 1.4E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 PRINTS PR00060 Ribosomal protein L16 signature 43 54 1.4E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 38.448 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 3 127 1.3E-61 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 Gene3D G3DSA:3.90.1170.10 2 138 1.6E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 Pfam PF00252 Ribosomal protein L16p/L10e 5 132 2.8E-50 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 JO41_04435 361b3358b1f5b74a6ff711812e0c299e 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 60 71 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SUPERFAMILY SSF48452 273 420 2.09E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 510 542 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 575 608 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 422 455 450.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 749 782 320.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 285 318 80.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 319 352 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 715 748 47.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 388 421 0.49 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 476 509 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SMART SM00028 648 681 0.078 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Pfam PF13181 Tetratricopeptide repeat 395 420 0.004 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Pfam PF13181 Tetratricopeptide repeat 649 681 0.015 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Gene3D G3DSA:1.25.40.10 270 386 2.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Gene3D G3DSA:1.25.40.10 447 563 3.5E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SUPERFAMILY SSF48452 395 629 6.07E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 SUPERFAMILY SSF48452 647 774 5.87E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Pfam PF13432 Tetratricopeptide repeat 325 371 7.3E-4 T 14-10-2018 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Pfam PF13432 Tetratricopeptide repeat 483 536 0.015 T 14-10-2018 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Pfam PF13432 Tetratricopeptide repeat 554 608 1.1E-4 T 14-10-2018 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Gene3D G3DSA:1.25.40.10 635 800 3.7E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Gene3D G3DSA:1.25.40.10 389 446 2.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12185 f1360380f35fb47c847c93bf124f0bb1 922 Gene3D G3DSA:1.25.40.10 564 634 1.2E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09620 106d565c2403c6be13e5c8d2515c34a7 304 Gene3D G3DSA:1.10.443.10 101 303 1.9E-46 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO41_09620 106d565c2403c6be13e5c8d2515c34a7 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 304 49.101 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD JO41_09620 106d565c2403c6be13e5c8d2515c34a7 304 SUPERFAMILY SSF56349 3 296 7.36E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO41_09620 106d565c2403c6be13e5c8d2515c34a7 304 Pfam PF00589 Phage integrase family 109 289 1.0E-35 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO41_09620 106d565c2403c6be13e5c8d2515c34a7 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 87 1.4E-17 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JO41_09620 106d565c2403c6be13e5c8d2515c34a7 304 Gene3D G3DSA:1.10.150.130 3 96 1.8E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 Gene3D G3DSA:1.25.40.10 164 378 4.5E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 Pfam PF14559 Tetratricopeptide repeat 241 287 2.8E-7 T 14-10-2018 JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 SMART SM00028 255 288 6.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 SMART SM00028 187 220 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 SMART SM00028 531 564 39.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 SUPERFAMILY SSF48452 336 566 2.21E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 Gene3D G3DSA:1.25.40.10 396 575 2.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05940 637ac4ac1f1b24e895a4d22c571c6615 578 SUPERFAMILY SSF48452 184 372 6.83E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 Pfam PF09383 NIL domain 260 330 2.5E-19 T 14-10-2018 IPR018449 NIL domain JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 Pfam PF00005 ABC transporter 17 165 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 SMART SM00382 26 229 3.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 Gene3D G3DSA:3.40.50.300 1 240 1.2E-73 T 14-10-2018 JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 SUPERFAMILY SSF55021 243 330 9.27E-20 T 14-10-2018 JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 SUPERFAMILY SSF52540 1 236 7.72E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 SMART SM00930 256 331 1.3E-19 T 14-10-2018 IPR018449 NIL domain JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_06305 13574da5f8f5e4530f5c00a6441374a8 333 Gene3D G3DSA:3.30.70.260 243 332 2.5E-18 T 14-10-2018 JO41_01025 0f31be1eb2e7646c3e254e99be0ab82d 354 Gene3D G3DSA:3.30.70.1230 154 353 2.3E-34 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_01025 0f31be1eb2e7646c3e254e99be0ab82d 354 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 176 340 1.3E-18 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_01025 0f31be1eb2e7646c3e254e99be0ab82d 354 SMART SM00044 150 328 9.2E-4 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_01025 0f31be1eb2e7646c3e254e99be0ab82d 354 SUPERFAMILY SSF55073 178 351 2.51E-30 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_06925 54e2b6b1b2325ec1bf3e85e60fa06062 114 Pfam PF01638 HxlR-like helix-turn-helix 16 103 1.7E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type JO41_06925 54e2b6b1b2325ec1bf3e85e60fa06062 114 Gene3D G3DSA:1.10.10.10 2 112 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_06925 54e2b6b1b2325ec1bf3e85e60fa06062 114 SUPERFAMILY SSF46785 6 104 3.28E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 SUPERFAMILY SSF54893 3 97 1.57E-29 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 Gene3D G3DSA:3.30.70.140 1 97 7.9E-33 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 6 96 2.0E-19 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 4 94 1.0E-28 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 1 149 27.474 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 Gene3D G3DSA:2.30.30.20 98 146 3.1E-12 T 14-10-2018 JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 SUPERFAMILY SSF57825 99 145 1.57E-10 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily JO41_02515 be381cba0e4b70b0a2fe21fefdf7479b 152 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 99 143 5.9E-13 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 SUPERFAMILY SSF118215 15 422 9.55E-114 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 Gene3D G3DSA:1.10.3860.10 2 433 2.4E-145 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 Pfam PF00375 Sodium:dicarboxylate symporter family 15 421 2.0E-119 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 4.4E-49 T 14-10-2018 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 4.4E-49 T 14-10-2018 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 4.4E-49 T 14-10-2018 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 PRINTS PR00173 Glutamate-aspartate symporter signature 369 389 4.4E-49 T 14-10-2018 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 4.4E-49 T 14-10-2018 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 PRINTS PR00173 Glutamate-aspartate symporter signature 57 77 4.4E-49 T 14-10-2018 JO41_10820 aea6b900c03371079a61beb384c7e2ba 434 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 4.4E-49 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 Gene3D G3DSA:3.40.50.300 368 560 2.7E-48 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 490 515 2.5E-20 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 471 489 2.5E-20 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 425 447 2.5E-20 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 371 393 2.5E-20 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 6 26 2.5E-20 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 Pfam PF13625 Helicase conserved C-terminal domain 8 134 4.3E-37 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 SMART SM00490 428 515 2.2E-9 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 SMART SM00487 186 363 4.2E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 367 555 5.0E-46 T 14-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 SUPERFAMILY SSF52540 237 533 5.24E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 Gene3D G3DSA:3.40.50.300 178 367 6.7E-33 T 14-10-2018 JO41_08870 78e0f12c5ee2c12a48b2eda535d945d1 564 Pfam PF04851 Type III restriction enzyme, res subunit 189 342 2.6E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JO41_01970 24f9e92baec1a837a1c4dfc9d8378fd9 301 Gene3D G3DSA:3.40.50.1820 4 299 7.0E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_01970 24f9e92baec1a837a1c4dfc9d8378fd9 301 SUPERFAMILY SSF53474 23 294 7.2E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_01970 24f9e92baec1a837a1c4dfc9d8378fd9 301 Pfam PF07859 alpha/beta hydrolase fold 71 273 9.9E-50 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JO41_03135 d9a744f79e5305957bd52cb33083a34c 164 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 51 5.1E-8 T 14-10-2018 IPR001451 Hexapeptide repeat JO41_03135 d9a744f79e5305957bd52cb33083a34c 164 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 138 2.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat JO41_03135 d9a744f79e5305957bd52cb33083a34c 164 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 53 86 2.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat JO41_03135 d9a744f79e5305957bd52cb33083a34c 164 Gene3D G3DSA:2.160.10.10 4 153 1.2E-48 T 14-10-2018 JO41_03135 d9a744f79e5305957bd52cb33083a34c 164 SUPERFAMILY SSF51161 2 157 3.05E-47 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JO41_03135 d9a744f79e5305957bd52cb33083a34c 164 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 112 140 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JO41_04030 fbc27e125db8f1a8db31c583cafd54a3 382 Gene3D G3DSA:1.20.1090.10 184 382 4.2E-25 T 14-10-2018 JO41_04030 fbc27e125db8f1a8db31c583cafd54a3 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 5.0E-49 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JO41_04030 fbc27e125db8f1a8db31c583cafd54a3 382 Gene3D G3DSA:3.40.50.1970 1 183 3.2E-25 T 14-10-2018 JO41_04030 fbc27e125db8f1a8db31c583cafd54a3 382 SUPERFAMILY SSF56796 4 382 5.83E-51 T 14-10-2018 JO41_08000 e98223951390acf6276855d2567d391c 746 Gene3D G3DSA:3.40.50.300 3 212 8.9E-46 T 14-10-2018 JO41_08000 e98223951390acf6276855d2567d391c 746 SMART SM00487 19 222 2.5E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_08000 e98223951390acf6276855d2567d391c 746 Pfam PF00271 Helicase conserved C-terminal domain 270 376 3.6E-15 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_08000 e98223951390acf6276855d2567d391c 746 Pfam PF00270 DEAD/DEAH box helicase 26 194 8.9E-25 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_08000 e98223951390acf6276855d2567d391c 746 Gene3D G3DSA:3.40.50.300 250 410 5.4E-25 T 14-10-2018 JO41_08000 e98223951390acf6276855d2567d391c 746 SUPERFAMILY SSF52540 33 387 3.61E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08000 e98223951390acf6276855d2567d391c 746 SMART SM00490 288 376 1.6E-13 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_04855 ccd7f807aea63abe2ae903f3bdd9ed4c 212 Gene3D G3DSA:3.40.630.30 1 186 6.5E-28 T 14-10-2018 JO41_04855 ccd7f807aea63abe2ae903f3bdd9ed4c 212 SUPERFAMILY SSF55729 5 142 2.96E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_04855 ccd7f807aea63abe2ae903f3bdd9ed4c 212 Pfam PF00583 Acetyltransferase (GNAT) family 54 136 2.3E-5 T 14-10-2018 IPR000182 GNAT domain JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 Pfam PF00106 short chain dehydrogenase 12 194 6.4E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 SUPERFAMILY SSF51735 11 270 5.45E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_08785 f5f88230a05b726ad752cf206f6a54f2 274 Gene3D G3DSA:3.40.50.720 8 247 9.7E-50 T 14-10-2018 JO41_09060 c2ce8579d619606de92ed66835aa8505 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 5.0E-17 T 14-10-2018 JO41_09060 c2ce8579d619606de92ed66835aa8505 89 SUPERFAMILY SSF47060 3 89 8.83E-31 T 14-10-2018 IPR009068 S15/NS1, RNA-binding JO41_09060 c2ce8579d619606de92ed66835aa8505 89 Gene3D G3DSA:1.10.287.10 1 89 5.7E-32 T 14-10-2018 JO41_09060 c2ce8579d619606de92ed66835aa8505 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 6.3E-37 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_09060 c2ce8579d619606de92ed66835aa8505 89 SMART SM01387 8 88 1.0E-42 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_09060 c2ce8579d619606de92ed66835aa8505 89 Pfam PF00312 Ribosomal protein S15 11 88 4.3E-33 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_09060 c2ce8579d619606de92ed66835aa8505 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.367 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Gene3D G3DSA:3.40.50.300 1 225 3.1E-68 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Gene3D G3DSA:2.40.50.140 247 333 1.6E-12 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 246 763 1.2E-193 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Gene3D G3DSA:2.40.50.140 427 508 1.1E-24 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SMART SM00316 258 321 4.9E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SMART SM00316 602 674 5.5E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SMART SM00316 430 500 1.2E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SMART SM00316 515 587 3.3E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SMART SM00316 337 411 3.5 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SMART SM00316 689 763 8.9E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SUPERFAMILY SSF50249 430 517 4.03E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Pfam PF02224 Cytidylate kinase 3 220 3.0E-71 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 216 4.2E-57 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SUPERFAMILY SSF50249 333 416 4.83E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SUPERFAMILY SSF50249 504 606 9.29E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SUPERFAMILY SSF50249 603 688 7.72E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SUPERFAMILY SSF50249 242 346 2.24E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SUPERFAMILY SSF50249 670 773 9.7E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Hamap MF_00238 Cytidylate kinase [cmk]. 1 223 27.272 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 PRINTS PR00681 Ribosomal protein S1 signature 362 379 2.5E-34 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 PRINTS PR00681 Ribosomal protein S1 signature 452 473 2.5E-34 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 PRINTS PR00681 Ribosomal protein S1 signature 530 549 2.5E-34 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 PRINTS PR00681 Ribosomal protein S1 signature 260 278 2.5E-34 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 PRINTS PR00681 Ribosomal protein S1 signature 278 292 2.5E-34 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 PRINTS PR00681 Ribosomal protein S1 signature 318 337 2.5E-34 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 PRINTS PR00681 Ribosomal protein S1 signature 570 588 2.5E-34 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Pfam PF00575 S1 RNA binding domain 513 587 7.9E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Pfam PF00575 S1 RNA binding domain 689 763 1.4E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Pfam PF00575 S1 RNA binding domain 257 320 1.8E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Pfam PF00575 S1 RNA binding domain 430 500 1.4E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Pfam PF00575 S1 RNA binding domain 603 674 8.0E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Gene3D G3DSA:2.40.50.140 509 596 1.0E-28 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Gene3D G3DSA:2.40.50.140 597 684 4.3E-22 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 Gene3D G3DSA:2.40.50.140 685 773 1.8E-20 T 14-10-2018 JO41_02685 f0a7531c29d1d3f06415b5bc07be2032 801 SUPERFAMILY SSF52540 1 219 1.58E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11575 22f26afc4abf5ec9fb310db5bee3c85a 328 Gene3D G3DSA:1.10.10.10 7 108 1.0E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_11575 22f26afc4abf5ec9fb310db5bee3c85a 328 Pfam PF13280 WYL domain 146 322 1.9E-31 T 14-10-2018 IPR026881 WYL domain JO41_11575 22f26afc4abf5ec9fb310db5bee3c85a 328 Pfam PF08279 HTH domain 32 69 1.2E-4 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 Gene3D G3DSA:3.40.50.300 25 189 8.3E-16 T 14-10-2018 JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 Pfam PF01555 DNA methylase 494 805 8.8E-11 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 SUPERFAMILY SSF53335 475 816 7.68E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 SUPERFAMILY SSF52540 23 191 5.83E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 SMART SM00487 26 205 7.9E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 Gene3D G3DSA:3.40.50.300 254 434 2.3E-11 T 14-10-2018 JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 Pfam PF00176 SNF2 family N-terminal domain 54 196 1.0E-5 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JO41_12725 ae20bdeaaf7681197b33dc2055308e0c 837 SUPERFAMILY SSF52540 132 441 2.66E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11950 f54df068db0f20fb8be4c18cf750c340 219 SUPERFAMILY SSF56176 140 218 5.18E-13 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_11950 f54df068db0f20fb8be4c18cf750c340 219 SMART SM01091 137 218 4.0E-8 T 14-10-2018 IPR005170 Transporter-associated domain JO41_11950 f54df068db0f20fb8be4c18cf750c340 219 Pfam PF03471 Transporter associated domain 141 217 1.3E-12 T 14-10-2018 IPR005170 Transporter-associated domain JO41_11950 f54df068db0f20fb8be4c18cf750c340 219 Gene3D G3DSA:3.30.465.10 143 217 2.1E-13 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO41_10380 899066ec95e34b6021227f8374382b3e 581 Gene3D G3DSA:3.40.50.300 321 576 9.3E-85 T 14-10-2018 JO41_10380 899066ec95e34b6021227f8374382b3e 581 SMART SM00382 354 540 3.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10380 899066ec95e34b6021227f8374382b3e 581 Gene3D G3DSA:1.20.1560.10 1 317 6.7E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10380 899066ec95e34b6021227f8374382b3e 581 Pfam PF00664 ABC transporter transmembrane region 47 271 1.1E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_10380 899066ec95e34b6021227f8374382b3e 581 SUPERFAMILY SSF90123 2 318 2.22E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10380 899066ec95e34b6021227f8374382b3e 581 SUPERFAMILY SSF52540 322 563 2.83E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10380 899066ec95e34b6021227f8374382b3e 581 Pfam PF00005 ABC transporter 345 494 2.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10380 899066ec95e34b6021227f8374382b3e 581 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_06160 a5744a3337fcc054bf19936416e53f19 327 SUPERFAMILY SSF56349 52 316 3.53E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO41_06160 a5744a3337fcc054bf19936416e53f19 327 Gene3D G3DSA:1.10.150.130 44 148 2.6E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JO41_06160 a5744a3337fcc054bf19936416e53f19 327 Pfam PF00589 Phage integrase family 160 314 5.2E-31 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO41_06160 a5744a3337fcc054bf19936416e53f19 327 Gene3D G3DSA:1.10.443.10 149 326 3.3E-46 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO41_06160 a5744a3337fcc054bf19936416e53f19 327 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 53 131 1.1E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JO41_00195 ee66bbc1a0dcf3a130be7a1b15daa178 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.8E-32 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00195 ee66bbc1a0dcf3a130be7a1b15daa178 82 Pfam PF00886 Ribosomal protein S16 9 68 1.9E-22 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00195 ee66bbc1a0dcf3a130be7a1b15daa178 82 SUPERFAMILY SSF54565 3 79 1.83E-29 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00195 ee66bbc1a0dcf3a130be7a1b15daa178 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 78 24.237 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00195 ee66bbc1a0dcf3a130be7a1b15daa178 82 Gene3D G3DSA:3.30.1320.10 1 82 4.7E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_09105 676f54d98a171d15721635611d501917 710 Pfam PF14827 Double sensory domain of two-component sensor kinase 54 206 4.7E-22 T 14-10-2018 IPR029150 Double Cache domain 3 JO41_09105 676f54d98a171d15721635611d501917 710 SUPERFAMILY SSF103190 85 195 4.32E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_09105 676f54d98a171d15721635611d501917 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 518 545 1.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09105 676f54d98a171d15721635611d501917 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 1.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09105 676f54d98a171d15721635611d501917 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 547 576 1.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09105 676f54d98a171d15721635611d501917 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 595 624 1.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_09105 676f54d98a171d15721635611d501917 710 Gene3D G3DSA:1.20.1480.50 291 382 4.4E-9 T 14-10-2018 JO41_09105 676f54d98a171d15721635611d501917 710 SMART SM00304 325 377 2.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_09105 676f54d98a171d15721635611d501917 710 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 634 4.3E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_09105 676f54d98a171d15721635611d501917 710 Gene3D G3DSA:1.10.287.950 391 709 4.3E-47 T 14-10-2018 JO41_09105 676f54d98a171d15721635611d501917 710 Pfam PF00672 HAMP domain 327 372 1.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_09105 676f54d98a171d15721635611d501917 710 SUPERFAMILY SSF58104 345 661 6.8E-48 T 14-10-2018 JO41_09105 676f54d98a171d15721635611d501917 710 SMART SM00283 420 667 5.7E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_00480 3a45ae2d2a5279c3c5fe2ceb58ae8120 127 SUPERFAMILY SSF143100 1 64 1.57E-14 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO41_00480 3a45ae2d2a5279c3c5fe2ceb58ae8120 127 Gene3D G3DSA:3.30.160.250 1 93 1.3E-19 T 14-10-2018 JO41_00480 3a45ae2d2a5279c3c5fe2ceb58ae8120 127 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 102 6.2E-13 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system JO41_00620 1e9157cc6f381351338bee09683f0946 154 SUPERFAMILY SSF103039 1 150 4.97E-35 T 14-10-2018 IPR028976 CheC-like superfamily JO41_00620 1e9157cc6f381351338bee09683f0946 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 137 1.6E-18 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain JO41_00620 1e9157cc6f381351338bee09683f0946 154 Gene3D G3DSA:3.40.1550.10 1 154 1.0E-41 T 14-10-2018 IPR028976 CheC-like superfamily JO41_01495 1b8c22abe983019ef3a06ec1cba8d100 283 SUPERFAMILY SSF161098 18 282 1.7E-58 T 14-10-2018 IPR035906 MetI-like superfamily JO41_01495 1b8c22abe983019ef3a06ec1cba8d100 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 269 1.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_01495 1b8c22abe983019ef3a06ec1cba8d100 283 Gene3D G3DSA:1.10.3720.10 6 274 2.0E-53 T 14-10-2018 IPR035906 MetI-like superfamily JO41_03575 d788e1c57dec547390a96ccc85f439d2 428 Gene3D G3DSA:3.65.10.10 21 228 1.9E-148 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO41_03575 d788e1c57dec547390a96ccc85f439d2 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 413 1.5E-65 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JO41_03575 d788e1c57dec547390a96ccc85f439d2 428 Gene3D G3DSA:3.65.10.10 6 421 1.9E-148 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO41_03575 d788e1c57dec547390a96ccc85f439d2 428 SUPERFAMILY SSF55205 2 423 5.56E-111 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JO41_03575 d788e1c57dec547390a96ccc85f439d2 428 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 36.188 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_03575 d788e1c57dec547390a96ccc85f439d2 428 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 2.4E-152 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_01460 466c62e3641841c211d3c1fe7dddc9ee 547 Pfam PF05681 Fumarate hydratase (Fumerase) 32 329 1.1E-60 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 JO41_01460 466c62e3641841c211d3c1fe7dddc9ee 547 Gene3D G3DSA:3.20.130.10 360 545 1.8E-49 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 JO41_01460 466c62e3641841c211d3c1fe7dddc9ee 547 SUPERFAMILY SSF117457 378 544 4.97E-48 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 JO41_01460 466c62e3641841c211d3c1fe7dddc9ee 547 Pfam PF05683 Fumarase C-terminus 362 546 3.0E-66 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 JO41_04420 e33efdf87d96c3f7868bb1dce6d00ec5 122 SMART SM01374 1 122 2.0E-84 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JO41_04420 e33efdf87d96c3f7868bb1dce6d00ec5 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.5E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JO41_04420 e33efdf87d96c3f7868bb1dce6d00ec5 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.1E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 JO41_04420 e33efdf87d96c3f7868bb1dce6d00ec5 122 SUPERFAMILY SSF50193 1 122 2.09E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04420 e33efdf87d96c3f7868bb1dce6d00ec5 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04420 e33efdf87d96c3f7868bb1dce6d00ec5 122 Gene3D G3DSA:2.40.150.20 1 122 3.5E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04420 e33efdf87d96c3f7868bb1dce6d00ec5 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.99 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 SUPERFAMILY SSF54184 572 624 1.31E-9 T 14-10-2018 JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 SUPERFAMILY SSF56601 196 545 3.19E-77 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 223 533 6.9E-58 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 161 6.2E-15 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 Gene3D G3DSA:3.90.1310.30 39 198 4.7E-33 T 14-10-2018 JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 SMART SM00740 568 625 2.4E-4 T 14-10-2018 IPR005543 PASTA domain JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 SUPERFAMILY SSF56519 42 184 2.88E-31 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 Gene3D G3DSA:3.40.710.10 257 457 3.0E-85 T 14-10-2018 JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 Pfam PF03793 PASTA domain 572 624 1.2E-7 T 14-10-2018 IPR005543 PASTA domain JO41_07225 e8f688af1e98f17e1c89b5ce854abbe6 625 Gene3D G3DSA:3.30.450.330 199 539 3.0E-85 T 14-10-2018 JO41_09045 db8fad5501930c085b271de4c5b03cc3 125 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 110 24.538 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO41_09045 db8fad5501930c085b271de4c5b03cc3 125 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 1.0E-39 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO41_09045 db8fad5501930c085b271de4c5b03cc3 125 SUPERFAMILY SSF89919 1 112 2.88E-28 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily JO41_09045 db8fad5501930c085b271de4c5b03cc3 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 113 1.7E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO41_09045 db8fad5501930c085b271de4c5b03cc3 125 Gene3D G3DSA:3.30.300.20 1 105 2.0E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO41_09045 db8fad5501930c085b271de4c5b03cc3 125 Pfam PF02033 Ribosome-binding factor A 5 107 1.6E-28 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JO41_05080 74f78f1babc8c47d0fb351f4dd4e3e05 224 Pfam PF02698 DUF218 domain 51 190 2.3E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 JO41_05465 1a1c81a6392006b04a8634badcf2b287 303 Pfam PF04055 Radical SAM superfamily 28 189 4.3E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_05465 1a1c81a6392006b04a8634badcf2b287 303 Gene3D G3DSA:3.80.30.30 81 228 1.8E-5 T 14-10-2018 JO41_05465 1a1c81a6392006b04a8634badcf2b287 303 SUPERFAMILY SSF102114 29 191 1.26E-10 T 14-10-2018 JO41_05465 1a1c81a6392006b04a8634badcf2b287 303 TIGRFAM TIGR04470 rSAM_mob_pairB: radical SAM mobile pair protein B 7 290 1.4E-129 T 14-10-2018 IPR031012 Radical SAM mobile pair protein B JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 Gene3D G3DSA:3.40.50.620 15 648 6.8E-240 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 Pfam PF08264 Anticodon-binding domain of tRNA 721 870 3.6E-30 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 Gene3D G3DSA:3.90.740.10 198 421 6.8E-240 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 SUPERFAMILY SSF50677 201 417 2.35E-41 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 Gene3D G3DSA:1.10.730.10 664 860 1.2E-50 T 14-10-2018 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 660 3.1E-196 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1066 14.142 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 7 882 3.9E-293 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 41 52 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 581 590 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 541 554 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 415 430 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 SUPERFAMILY SSF52374 4 670 2.58E-136 T 14-10-2018 JO41_01275 4732a41a0795579c79c3e9cafe50ff91 1094 SUPERFAMILY SSF47323 678 929 9.53E-52 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_08630 d571bce48b80274db3036011d1b18df6 101 PRINTS PR00421 Thioredoxin family signature 21 29 1.7E-9 T 14-10-2018 JO41_08630 d571bce48b80274db3036011d1b18df6 101 PRINTS PR00421 Thioredoxin family signature 29 38 1.7E-9 T 14-10-2018 JO41_08630 d571bce48b80274db3036011d1b18df6 101 PRINTS PR00421 Thioredoxin family signature 69 80 1.7E-9 T 14-10-2018 JO41_08630 d571bce48b80274db3036011d1b18df6 101 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JO41_08630 d571bce48b80274db3036011d1b18df6 101 Gene3D G3DSA:3.40.30.10 2 101 9.5E-35 T 14-10-2018 JO41_08630 d571bce48b80274db3036011d1b18df6 101 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 100 5.1E-38 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JO41_08630 d571bce48b80274db3036011d1b18df6 101 PIRSF PIRSF000077 1 101 9.7E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JO41_08630 d571bce48b80274db3036011d1b18df6 101 Pfam PF00085 Thioredoxin 3 99 8.7E-32 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 JO41_08630 d571bce48b80274db3036011d1b18df6 101 SUPERFAMILY SSF52833 3 101 7.28E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 Pfam PF00037 4Fe-4S binding domain 185 203 1.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 SUPERFAMILY SSF52218 4 122 2.02E-13 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 SUPERFAMILY SSF54862 172 239 5.86E-17 T 14-10-2018 JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 Pfam PF12724 Flavodoxin domain 4 84 2.6E-8 T 14-10-2018 IPR026816 Flavodoxin domain JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 Gene3D G3DSA:3.40.50.360 4 128 1.1E-9 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 Gene3D G3DSA:3.30.70.20 178 239 2.2E-11 T 14-10-2018 JO41_01225 bf5a026a9d02b309fd27233146d858bb 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 220 231 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_05885 b7c0b574080b046c7066f54264b8a6c8 654 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 14 646 9.0E-282 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JO41_05885 b7c0b574080b046c7066f54264b8a6c8 654 PIRSF PIRSF000906 8 649 1.9E-272 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JO41_05885 b7c0b574080b046c7066f54264b8a6c8 654 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 12 648 35.992 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JO41_05885 b7c0b574080b046c7066f54264b8a6c8 654 SUPERFAMILY SSF56300 190 543 1.77E-8 T 14-10-2018 JO41_05885 b7c0b574080b046c7066f54264b8a6c8 654 Gene3D G3DSA:3.60.21.10 180 258 7.9E-7 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_07015 11a761370ff6f9c2c42ddb2495ff70a7 99 SUPERFAMILY SSF54975 10 97 2.62E-26 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JO41_07015 11a761370ff6f9c2c42ddb2495ff70a7 99 ProSitePatterns PS00150 Acylphosphatase signature 1. 18 28 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JO41_07015 11a761370ff6f9c2c42ddb2495ff70a7 99 Gene3D G3DSA:3.30.70.100 1 97 1.1E-26 T 14-10-2018 JO41_07015 11a761370ff6f9c2c42ddb2495ff70a7 99 Pfam PF00708 Acylphosphatase 15 96 7.6E-23 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JO41_06340 5ed115989aa90ade5e5876d6a9ff3904 308 Gene3D G3DSA:1.10.10.10 2 52 7.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_06340 5ed115989aa90ade5e5876d6a9ff3904 308 Gene3D G3DSA:3.40.50.1360 53 305 3.7E-60 T 14-10-2018 JO41_06340 5ed115989aa90ade5e5876d6a9ff3904 308 Pfam PF04198 Putative sugar-binding domain 60 305 1.3E-53 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 JO41_06340 5ed115989aa90ade5e5876d6a9ff3904 308 SUPERFAMILY SSF100950 58 306 2.09E-54 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_06340 5ed115989aa90ade5e5876d6a9ff3904 308 Pfam PF04545 Sigma-70, region 4 17 45 7.6E-7 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JO41_10350 0f46ae0c672551b2c0dfb3ae5da8be8e 205 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 14 201 5.0E-35 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_10350 0f46ae0c672551b2c0dfb3ae5da8be8e 205 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 11 201 2.4E-23 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 Gene3D G3DSA:1.25.40.10 146 226 1.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 Pfam PF13181 Tetratricopeptide repeat 184 213 0.16 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 SUPERFAMILY SSF48452 39 222 2.95E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 Pfam PF13432 Tetratricopeptide repeat 116 166 3.9E-6 T 14-10-2018 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 Gene3D G3DSA:1.25.40.10 24 145 1.3E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 Pfam PF13174 Tetratricopeptide repeat 39 63 0.21 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 SMART SM00028 110 143 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 SMART SM00028 36 69 290.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 SMART SM00028 147 180 0.073 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_01600 4c4fa28565eb5dc6a602272c547195ef 226 SMART SM00028 181 214 9.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_02440 116392c46cda119980c90ae827984e8d 259 Gene3D G3DSA:3.90.226.10 1 199 3.7E-75 T 14-10-2018 JO41_02440 116392c46cda119980c90ae827984e8d 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 253 3.5E-69 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JO41_02440 116392c46cda119980c90ae827984e8d 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JO41_02440 116392c46cda119980c90ae827984e8d 259 Gene3D G3DSA:1.10.12.10 200 256 1.7E-15 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JO41_02440 116392c46cda119980c90ae827984e8d 259 SUPERFAMILY SSF52096 1 252 3.58E-88 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 SUPERFAMILY SSF53244 322 456 4.27E-24 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 456 1.2E-115 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 Gene3D G3DSA:3.40.1390.10 2 78 8.3E-16 T 14-10-2018 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 SUPERFAMILY SSF63418 21 113 1.44E-18 T 14-10-2018 IPR035911 MurE/MurF, N-terminal JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 Pfam PF08245 Mur ligase middle domain 123 300 2.1E-40 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 459 27.773 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 Pfam PF01225 Mur ligase family, catalytic domain 28 111 8.2E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 SUPERFAMILY SSF53623 120 316 2.49E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 Gene3D G3DSA:3.40.1190.10 99 318 5.6E-58 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 399 3.6E-12 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JO41_01165 502ec2364e45d1ab758ba65f26089f9b 463 Gene3D G3DSA:3.90.190.20 322 463 1.1E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_09920 b6ed3b056f94cba690b6f1dda9fba0e8 197 Pfam PF13306 Leucine rich repeats (6 copies) 50 170 2.5E-29 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_09920 b6ed3b056f94cba690b6f1dda9fba0e8 197 Gene3D G3DSA:3.80.10.10 117 197 2.2E-16 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_09920 b6ed3b056f94cba690b6f1dda9fba0e8 197 Gene3D G3DSA:3.80.10.10 2 116 6.5E-23 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_02335 d4592903456f781f62864f164c354003 1469 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1210 1388 1.4E-10 T 14-10-2018 IPR007452 Translocation and assembly module TamB JO41_03470 20d955a9a7758e874303314ee82d5b98 741 Gene3D G3DSA:3.60.40.10 359 637 1.4E-35 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_03470 20d955a9a7758e874303314ee82d5b98 741 SMART SM00331 400 623 8.1E-28 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_03470 20d955a9a7758e874303314ee82d5b98 741 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 429 577 2.0E-21 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_03470 20d955a9a7758e874303314ee82d5b98 741 SMART SM00304 309 366 4.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_00210 34f2f23ce5b6b9debc9ebe766b9de65e 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 224 1.9E-95 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO41_00210 34f2f23ce5b6b9debc9ebe766b9de65e 248 Gene3D G3DSA:3.40.1280.10 1 168 1.3E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_00210 34f2f23ce5b6b9debc9ebe766b9de65e 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 100.342 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO41_00210 34f2f23ce5b6b9debc9ebe766b9de65e 248 Gene3D G3DSA:1.10.1270.20 169 246 2.1E-28 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO41_00210 34f2f23ce5b6b9debc9ebe766b9de65e 248 SUPERFAMILY SSF75217 1 238 5.56E-92 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO41_00210 34f2f23ce5b6b9debc9ebe766b9de65e 248 PIRSF PIRSF000386 1 245 1.2E-95 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO41_00210 34f2f23ce5b6b9debc9ebe766b9de65e 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 217 2.3E-64 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JO41_00505 7376be96619f280e1dae90f10a48b1a7 490 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 482 1.1E-162 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JO41_00505 7376be96619f280e1dae90f10a48b1a7 490 Gene3D G3DSA:3.40.50.2000 3 481 1.3E-172 T 14-10-2018 JO41_00505 7376be96619f280e1dae90f10a48b1a7 490 Gene3D G3DSA:3.40.50.2000 254 467 1.3E-172 T 14-10-2018 JO41_00505 7376be96619f280e1dae90f10a48b1a7 490 Hamap MF_00484 Glycogen synthase [glgA]. 1 483 40.802 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JO41_00505 7376be96619f280e1dae90f10a48b1a7 490 Pfam PF00534 Glycosyl transferases group 1 293 461 4.5E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO41_00505 7376be96619f280e1dae90f10a48b1a7 490 SUPERFAMILY SSF53756 3 485 2.2E-112 T 14-10-2018 JO41_00505 7376be96619f280e1dae90f10a48b1a7 490 Pfam PF08323 Starch synthase catalytic domain 2 240 3.0E-76 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 SUPERFAMILY SSF52058 126 394 7.29E-21 T 14-10-2018 JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 Pfam PF13306 Leucine rich repeats (6 copies) 341 382 2.2E-4 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 Pfam PF13306 Leucine rich repeats (6 copies) 216 336 3.0E-35 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 Pfam PF13306 Leucine rich repeats (6 copies) 83 156 8.2E-12 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 Gene3D G3DSA:3.80.10.10 150 215 7.8E-21 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 Gene3D G3DSA:3.80.10.10 25 149 7.2E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 Gene3D G3DSA:3.80.10.10 216 279 1.0E-21 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_00935 5f2f283dc06a33ae9b9a51048d0dd712 418 Gene3D G3DSA:3.80.10.10 280 410 8.6E-26 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_07155 c1fc580cd63abc33cd4c870720354753 438 Gene3D G3DSA:2.130.10.10 339 425 2.1E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO41_07155 c1fc580cd63abc33cd4c870720354753 438 SUPERFAMILY SSF50998 85 407 9.22E-19 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JO41_07155 c1fc580cd63abc33cd4c870720354753 438 Gene3D G3DSA:2.130.10.10 50 334 2.9E-14 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO41_07155 c1fc580cd63abc33cd4c870720354753 438 Pfam PF13570 PQQ-like domain 355 394 1.6E-5 T 14-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain JO41_11235 01417c9dc43f427b496a93a0f9a4d8ba 709 Gene3D G3DSA:2.130.10.10 452 709 1.9E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO41_11235 01417c9dc43f427b496a93a0f9a4d8ba 709 SUPERFAMILY SSF82171 117 479 1.22E-19 T 14-10-2018 JO41_11235 01417c9dc43f427b496a93a0f9a4d8ba 709 Gene3D G3DSA:2.130.10.10 58 433 4.8E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO41_11235 01417c9dc43f427b496a93a0f9a4d8ba 709 SUPERFAMILY SSF50998 310 703 2.86E-10 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 Pfam PF00005 ABC transporter 272 423 7.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 Pfam PF00005 ABC transporter 24 167 4.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 SUPERFAMILY SSF52540 269 484 2.66E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 Gene3D G3DSA:3.40.50.300 1 232 4.1E-58 T 14-10-2018 JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 SMART SM00382 279 472 2.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 SMART SM00382 33 214 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 SUPERFAMILY SSF52540 7 226 6.96E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06335 ba397957cbe936b931d624f8eb9eefd9 500 Gene3D G3DSA:3.40.50.300 259 490 1.9E-42 T 14-10-2018 JO41_10015 d133ea18869664b6e8c4a6f91d74f472 554 Gene3D G3DSA:1.20.58.220 342 551 1.8E-6 T 14-10-2018 IPR038078 PhoU-like domain superfamily JO41_10015 d133ea18869664b6e8c4a6f91d74f472 554 Pfam PF02690 Na+/Pi-cotransporter 17 155 2.2E-45 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 JO41_10015 d133ea18869664b6e8c4a6f91d74f472 554 Pfam PF02690 Na+/Pi-cotransporter 181 265 8.0E-11 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 JO41_10015 d133ea18869664b6e8c4a6f91d74f472 554 Pfam PF01895 PhoU domain 359 442 2.6E-5 T 14-10-2018 IPR026022 PhoU domain JO41_10015 d133ea18869664b6e8c4a6f91d74f472 554 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 4 323 2.9E-110 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 JO41_10015 d133ea18869664b6e8c4a6f91d74f472 554 SUPERFAMILY SSF109755 349 549 4.29E-19 T 14-10-2018 JO41_02420 584ba33fc6a8680e70a33623d90597d9 585 SUPERFAMILY SSF52540 299 537 2.48E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02420 584ba33fc6a8680e70a33623d90597d9 585 SMART SM00382 326 460 4.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02420 584ba33fc6a8680e70a33623d90597d9 585 Gene3D G3DSA:3.40.50.300 293 459 3.6E-26 T 14-10-2018 JO41_02420 584ba33fc6a8680e70a33623d90597d9 585 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 331 454 1.3E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_02420 584ba33fc6a8680e70a33623d90597d9 585 Gene3D G3DSA:1.10.8.60 462 538 4.3E-7 T 14-10-2018 JO41_00515 d1a99b046675e3ae825766bc88558960 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 231 298 5.2E-8 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JO41_00515 d1a99b046675e3ae825766bc88558960 328 Gene3D G3DSA:3.30.1220.10 195 299 1.6E-5 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily JO41_00515 d1a99b046675e3ae825766bc88558960 328 SUPERFAMILY SSF52540 2 178 9.64E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00515 d1a99b046675e3ae825766bc88558960 328 SUPERFAMILY SSF90002 226 297 1.44E-6 T 14-10-2018 JO41_00515 d1a99b046675e3ae825766bc88558960 328 SMART SM00833 217 299 0.0058 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JO41_00515 d1a99b046675e3ae825766bc88558960 328 Gene3D G3DSA:3.40.50.300 1 188 2.8E-39 T 14-10-2018 JO41_00515 d1a99b046675e3ae825766bc88558960 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 175 5.8E-31 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JO41_09245 2e64fe84c6ae3a55e54921da54e14e3f 172 Pfam PF01814 Hemerythrin HHE cation binding domain 26 146 2.4E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JO41_09245 2e64fe84c6ae3a55e54921da54e14e3f 172 Gene3D G3DSA:1.20.120.50 14 149 2.9E-36 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO41_09245 2e64fe84c6ae3a55e54921da54e14e3f 172 SUPERFAMILY SSF47188 14 145 9.03E-31 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JO41_09245 2e64fe84c6ae3a55e54921da54e14e3f 172 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 17 146 1.9E-33 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JO41_09245 2e64fe84c6ae3a55e54921da54e14e3f 172 ProSitePatterns PS00550 Hemerythrin family signature. 76 99 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 Gene3D G3DSA:3.40.50.2300 1 146 1.3E-29 T 14-10-2018 JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 PIRSF PIRSF000876 1 387 5.3E-131 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 Pfam PF01339 CheB methylesterase 200 378 3.0E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 SUPERFAMILY SSF52172 1 139 8.97E-29 T 14-10-2018 IPR011006 CheY-like superfamily JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 SUPERFAMILY SSF52738 196 383 3.79E-63 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 Gene3D G3DSA:3.40.50.180 191 385 9.7E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 Pfam PF00072 Response regulator receiver domain 6 112 5.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 384 36.621 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JO41_10115 b1c7dd19d5dd403fb70bfc56a687c10f 387 SMART SM00448 4 121 2.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_05765 d3ef440bbfc5c5db9ae01bb29be5d64e 152 Gene3D G3DSA:3.40.50.360 3 148 1.4E-15 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_05765 d3ef440bbfc5c5db9ae01bb29be5d64e 152 SUPERFAMILY SSF52218 1 147 2.42E-20 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_05765 d3ef440bbfc5c5db9ae01bb29be5d64e 152 Pfam PF12724 Flavodoxin domain 6 93 1.0E-15 T 14-10-2018 IPR026816 Flavodoxin domain JO41_05715 98bed667074f949785f8f78897361ede 285 SUPERFAMILY SSF161098 7 273 1.59E-47 T 14-10-2018 IPR035906 MetI-like superfamily JO41_05715 98bed667074f949785f8f78897361ede 285 Gene3D G3DSA:1.10.3720.10 18 282 5.3E-41 T 14-10-2018 IPR035906 MetI-like superfamily JO41_05715 98bed667074f949785f8f78897361ede 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 266 5.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_11435 08af6bcc201cb944b111d33336252ca2 113 Pfam PF01934 Protein of unknown function DUF86 14 109 3.2E-20 T 14-10-2018 IPR008201 Protein of unknown function DUF86 JO41_04510 22df9e28ed9a8c9b655626a32d816eee 345 Pfam PF01476 LysM domain 297 343 1.1E-5 T 14-10-2018 IPR018392 LysM domain JO41_04510 22df9e28ed9a8c9b655626a32d816eee 345 SMART SM00257 296 343 0.0016 T 14-10-2018 IPR018392 LysM domain JO41_04510 22df9e28ed9a8c9b655626a32d816eee 345 Gene3D G3DSA:3.10.350.10 296 342 9.5E-9 T 14-10-2018 IPR036779 LysM domain superfamily JO41_04510 22df9e28ed9a8c9b655626a32d816eee 345 Pfam PF00012 Hsp70 protein 23 109 1.6E-5 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JO41_04510 22df9e28ed9a8c9b655626a32d816eee 345 SUPERFAMILY SSF54106 295 343 1.31E-5 T 14-10-2018 JO41_04510 22df9e28ed9a8c9b655626a32d816eee 345 SUPERFAMILY SSF100920 4 105 8.76E-15 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO41_04510 22df9e28ed9a8c9b655626a32d816eee 345 Gene3D G3DSA:2.60.34.10 1 128 4.1E-16 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 Pfam PF00654 Voltage gated chloride channel 78 419 8.8E-76 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 SUPERFAMILY SSF81340 17 430 1.19E-88 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 Gene3D G3DSA:3.30.70.1450 453 524 6.2E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 Gene3D G3DSA:1.10.3080.10 8 442 2.5E-83 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 SUPERFAMILY SSF116726 455 522 4.45E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 Pfam PF02080 TrkA-C domain 456 514 1.8E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 PRINTS PR00762 Chloride channel signature 387 406 1.5E-13 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 PRINTS PR00762 Chloride channel signature 334 354 1.5E-13 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 PRINTS PR00762 Chloride channel signature 90 107 1.5E-13 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO41_02860 a6fb0947ca2edf1933091139f5aa2cc5 531 PRINTS PR00762 Chloride channel signature 170 189 1.5E-13 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JO41_09875 b7b0d40ac7560da768a87f8e650e4adb 132 Pfam PF00364 Biotin-requiring enzyme 66 130 1.6E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JO41_09875 b7b0d40ac7560da768a87f8e650e4adb 132 Gene3D G3DSA:2.40.50.100 58 132 1.1E-22 T 14-10-2018 JO41_09875 b7b0d40ac7560da768a87f8e650e4adb 132 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 88 105 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JO41_09875 b7b0d40ac7560da768a87f8e650e4adb 132 SUPERFAMILY SSF51230 52 131 3.01E-23 T 14-10-2018 IPR011053 Single hybrid motif JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 Gene3D G3DSA:1.10.287.950 399 697 3.3E-47 T 14-10-2018 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 SUPERFAMILY SSF58104 332 433 7.06E-9 T 14-10-2018 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 SUPERFAMILY SSF58104 420 652 4.19E-44 T 14-10-2018 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 Gene3D G3DSA:3.30.450.20 83 174 1.3E-16 T 14-10-2018 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 Pfam PF02743 Cache domain 41 271 9.3E-20 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 505 532 9.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 9.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 582 611 9.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 534 563 9.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 Pfam PF00672 HAMP domain 310 360 1.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 SMART SM00304 310 364 1.9E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 Gene3D G3DSA:1.20.1480.50 274 368 3.9E-9 T 14-10-2018 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 622 1.8E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 SUPERFAMILY SSF103190 70 175 2.38E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_06210 3aab1b630cc2fca3b18218ce333e124b 698 SMART SM00283 407 654 1.4E-57 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_12610 b12b120fa2b8352baa4b85f23e39d287 309 Pfam PF00005 ABC transporter 31 181 7.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_12610 b12b120fa2b8352baa4b85f23e39d287 309 Gene3D G3DSA:3.40.50.300 1 306 5.2E-78 T 14-10-2018 JO41_12610 b12b120fa2b8352baa4b85f23e39d287 309 SUPERFAMILY SSF52540 3 253 3.8E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12610 b12b120fa2b8352baa4b85f23e39d287 309 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_12610 b12b120fa2b8352baa4b85f23e39d287 309 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 1.0E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO41_12610 b12b120fa2b8352baa4b85f23e39d287 309 SMART SM00382 39 231 5.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11315 3198bc2c38d77028141fb55b6d8d5ccc 410 Pfam PF00999 Sodium/hydrogen exchanger family 26 379 7.5E-35 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JO41_11315 3198bc2c38d77028141fb55b6d8d5ccc 410 Gene3D G3DSA:1.20.1530.20 18 400 2.9E-44 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JO41_08815 ce581785fa111b25e6302551e13b1672 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 9.3E-38 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JO41_08815 ce581785fa111b25e6302551e13b1672 390 SUPERFAMILY SSF56645 1 247 2.09E-89 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JO41_08815 ce581785fa111b25e6302551e13b1672 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JO41_08815 ce581785fa111b25e6302551e13b1672 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 222 3.6E-28 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JO41_08815 ce581785fa111b25e6302551e13b1672 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 387 4.3E-49 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JO41_08815 ce581785fa111b25e6302551e13b1672 390 Gene3D G3DSA:1.20.140.10 240 389 7.8E-53 T 14-10-2018 JO41_08815 ce581785fa111b25e6302551e13b1672 390 PIRSF PIRSF016578 130 388 2.8E-20 T 14-10-2018 JO41_08815 ce581785fa111b25e6302551e13b1672 390 PIRSF PIRSF016578 4 106 4.6E-10 T 14-10-2018 JO41_08815 ce581785fa111b25e6302551e13b1672 390 Gene3D G3DSA:2.40.110.10 121 239 2.9E-44 T 14-10-2018 JO41_08815 ce581785fa111b25e6302551e13b1672 390 SUPERFAMILY SSF47203 234 386 8.22E-55 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JO41_08815 ce581785fa111b25e6302551e13b1672 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JO41_08815 ce581785fa111b25e6302551e13b1672 390 Gene3D G3DSA:1.10.540.10 1 120 1.1E-45 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 189 198 5.7E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 161 174 5.7E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 80 91 5.7E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 145 158 5.7E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 105 123 5.7E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 126 142 5.7E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 Gene3D G3DSA:3.90.226.10 3 310 1.7E-98 T 14-10-2018 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 18 308 5.3E-114 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 SUPERFAMILY SSF52096 34 308 2.49E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 16 140 9.1E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06710 f6fd47f0cdb13c8b58f839d96d5b6d0b 310 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 308 42.223 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_11495 04997ab3ee88801a64a99ab4a6a8d34f 411 SUPERFAMILY SSF53187 7 407 1.28E-56 T 14-10-2018 JO41_11495 04997ab3ee88801a64a99ab4a6a8d34f 411 Gene3D G3DSA:3.30.70.360 205 326 8.3E-69 T 14-10-2018 JO41_11495 04997ab3ee88801a64a99ab4a6a8d34f 411 Gene3D G3DSA:3.40.630.10 25 394 8.3E-69 T 14-10-2018 JO41_11495 04997ab3ee88801a64a99ab4a6a8d34f 411 Pfam PF07687 Peptidase dimerisation domain 201 311 5.8E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO41_11495 04997ab3ee88801a64a99ab4a6a8d34f 411 Pfam PF01546 Peptidase family M20/M25/M40 92 405 2.1E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO41_11495 04997ab3ee88801a64a99ab4a6a8d34f 411 SUPERFAMILY SSF55031 207 318 6.73E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 SMART SM00267 169 338 1.4E-20 T 14-10-2018 IPR000160 GGDEF domain JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 Gene3D G3DSA:2.60.120.10 12 169 7.5E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 SUPERFAMILY SSF51206 27 148 5.5E-23 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 318 8.5E-28 T 14-10-2018 IPR000160 GGDEF domain JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 318 4.4E-26 T 14-10-2018 IPR000160 GGDEF domain JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 SMART SM00100 35 152 3.8E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 SUPERFAMILY SSF55073 185 336 3.84E-31 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 Pfam PF00027 Cyclic nucleotide-binding domain 55 130 5.9E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_05290 9971f71f7fb657aceae6314e15f4022c 341 Gene3D G3DSA:3.30.70.270 172 321 6.6E-34 T 14-10-2018 JO41_00655 52d5cf122321b0fbb404c378b62f8038 393 Gene3D G3DSA:3.30.460.10 17 161 1.0E-50 T 14-10-2018 JO41_00655 52d5cf122321b0fbb404c378b62f8038 393 SUPERFAMILY SSF81301 22 162 1.85E-36 T 14-10-2018 JO41_00655 52d5cf122321b0fbb404c378b62f8038 393 Pfam PF01743 Poly A polymerase head domain 50 164 3.8E-32 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO41_00655 52d5cf122321b0fbb404c378b62f8038 393 SUPERFAMILY SSF81891 170 278 1.7E-17 T 14-10-2018 JO41_00655 52d5cf122321b0fbb404c378b62f8038 393 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 19 327 3.4E-107 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 JO41_00655 52d5cf122321b0fbb404c378b62f8038 393 Gene3D G3DSA:1.10.3090.10 167 355 1.6E-23 T 14-10-2018 JO41_00655 52d5cf122321b0fbb404c378b62f8038 393 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 203 251 2.5E-11 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JO41_06865 77902411a980741e518bd34f709f6352 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 42 5.1E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO41_06865 77902411a980741e518bd34f709f6352 82 SMART SM00966 4 49 4.5E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO41_06865 77902411a980741e518bd34f709f6352 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 41 7.4E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JO41_06865 77902411a980741e518bd34f709f6352 82 SUPERFAMILY SSF89447 1 46 4.36E-12 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO41_06865 77902411a980741e518bd34f709f6352 82 Gene3D G3DSA:2.10.260.10 1 42 1.2E-14 T 14-10-2018 JO41_07175 c7dc241d978c64f72021da03be1bfa00 693 Pfam PF03030 Inorganic H+ pyrophosphatase 18 683 1.4E-261 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_07175 c7dc241d978c64f72021da03be1bfa00 693 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 12 689 3.4E-254 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_07175 c7dc241d978c64f72021da03be1bfa00 693 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 688 24.485 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_07175 c7dc241d978c64f72021da03be1bfa00 693 PIRSF PIRSF001265 2 692 2.5E-262 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 SUPERFAMILY SSF142019 114 301 8.24E-53 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 413 424 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 101 3.8E-29 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 Gene3D G3DSA:3.40.50.11540 132 290 5.6E-18 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 5 443 5.0E-132 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 127 281 1.0E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 SUPERFAMILY SSF46548 332 444 1.1E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 Gene3D G3DSA:3.30.70.20 349 448 1.3E-7 T 14-10-2018 JO41_06735 b9f74ca66f3940ec1966769f221ee912 458 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 458 123.246 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 JO41_08980 ffd7ce09fe2b6d2a8187f0e1d797c974 172 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 132 9.5E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JO41_08980 ffd7ce09fe2b6d2a8187f0e1d797c974 172 SUPERFAMILY SSF54534 2 136 8.05E-36 T 14-10-2018 JO41_08980 ffd7ce09fe2b6d2a8187f0e1d797c974 172 Gene3D G3DSA:3.10.50.40 3 146 5.9E-50 T 14-10-2018 JO41_08980 ffd7ce09fe2b6d2a8187f0e1d797c974 172 Gene3D G3DSA:2.40.10.330 71 117 5.9E-50 T 14-10-2018 JO41_01365 4bbc1968185671f4b7f656fe55c0c726 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 139 8.7E-25 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 JO41_01365 4bbc1968185671f4b7f656fe55c0c726 148 Pfam PF02050 Flagellar FliJ protein 21 136 9.7E-11 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 JO41_04620 affcb4ef4a9444c8162e207275f8141e 118 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 98 1.9E-14 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis JO41_04620 affcb4ef4a9444c8162e207275f8141e 118 Gene3D G3DSA:3.30.420.130 1 105 2.6E-23 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily JO41_04620 affcb4ef4a9444c8162e207275f8141e 118 SUPERFAMILY SSF53146 1 118 1.7E-26 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily JO41_09050 9786a66b8c111d392702c7551eef1899 342 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 9 232 6.1E-69 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_09050 9786a66b8c111d392702c7551eef1899 342 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 6 332 15.235 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_09050 9786a66b8c111d392702c7551eef1899 342 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 28 193 7.5E-41 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 JO41_09050 9786a66b8c111d392702c7551eef1899 342 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 194 233 1.4E-7 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 JO41_09050 9786a66b8c111d392702c7551eef1899 342 SUPERFAMILY SSF55120 8 234 1.09E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_09050 9786a66b8c111d392702c7551eef1899 342 Gene3D G3DSA:3.30.2350.10 2 266 1.7E-71 T 14-10-2018 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 Gene3D G3DSA:3.30.160.20 212 307 3.4E-95 T 14-10-2018 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 SMART SM00937 69 181 5.8E-46 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 Gene3D G3DSA:3.30.70.1660 117 345 3.4E-95 T 14-10-2018 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 Gene3D G3DSA:1.20.58.410 2 102 1.5E-17 T 14-10-2018 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 Pfam PF00472 RF-1 domain 215 324 2.7E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 7 350 7.9E-152 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 SUPERFAMILY SSF75620 14 356 7.06E-128 T 14-10-2018 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 352 37.685 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 231 247 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO41_12535 0a7f5e0f15f332977e65af25b8a4af4c 363 Pfam PF03462 PCRF domain 15 206 1.1E-54 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO41_10505 87811f390daef88c373679a54fa57f87 184 Gene3D G3DSA:1.10.530.10 47 181 5.0E-7 T 14-10-2018 JO41_10505 87811f390daef88c373679a54fa57f87 184 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 58 181 1.2E-15 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 38.382 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 PIRSF PIRSF000164 1 303 2.0E-76 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 Pfam PF01180 Dihydroorotate dehydrogenase 4 284 3.6E-73 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 302 5.9E-103 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 Gene3D G3DSA:3.20.20.70 12 291 5.0E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 Gene3D G3DSA:2.30.26.10 55 217 5.0E-93 T 14-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 SUPERFAMILY SSF51395 3 292 7.0E-81 T 14-10-2018 JO41_02505 6c599d5f0e3d935febeaba9918cfb70a 324 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 240 260 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JO41_10060 d8171a12e12aecd3ee2517c13d99d26d 347 Gene3D G3DSA:3.90.1150.10 11 342 4.0E-111 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_10060 d8171a12e12aecd3ee2517c13d99d26d 347 Pfam PF01212 Beta-eliminating lyase 9 231 4.0E-32 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JO41_10060 d8171a12e12aecd3ee2517c13d99d26d 347 SUPERFAMILY SSF53383 6 346 8.02E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_10060 d8171a12e12aecd3ee2517c13d99d26d 347 Gene3D G3DSA:3.40.640.10 18 259 4.0E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_09190 9ae8692aafed7d61b4742ba143b6a8bf 234 Pfam PF01048 Phosphorylase superfamily 15 232 2.5E-35 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JO41_09190 9ae8692aafed7d61b4742ba143b6a8bf 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JO41_09190 9ae8692aafed7d61b4742ba143b6a8bf 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 42.898 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JO41_09190 9ae8692aafed7d61b4742ba143b6a8bf 234 Gene3D G3DSA:3.40.50.1580 1 233 7.3E-69 T 14-10-2018 JO41_09190 9ae8692aafed7d61b4742ba143b6a8bf 234 SUPERFAMILY SSF53167 2 232 6.15E-85 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JO41_09190 9ae8692aafed7d61b4742ba143b6a8bf 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 8.7E-89 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JO41_07230 4890d99e486b0cce7f2ba4d59eff72b5 143 Gene3D G3DSA:2.10.109.10 1 55 4.7E-6 T 14-10-2018 JO41_07230 4890d99e486b0cce7f2ba4d59eff72b5 143 Gene3D G3DSA:2.10.109.10 107 140 2.7E-6 T 14-10-2018 JO41_07230 4890d99e486b0cce7f2ba4d59eff72b5 143 SUPERFAMILY SSF51306 1 141 3.92E-24 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO41_07230 4890d99e486b0cce7f2ba4d59eff72b5 143 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 1 141 6.1E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 Gene3D G3DSA:3.40.50.720 7 105 2.2E-17 T 14-10-2018 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 SUPERFAMILY SSF51984 8 100 2.79E-8 T 14-10-2018 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 SUPERFAMILY SSF53623 106 321 3.53E-38 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 Gene3D G3DSA:3.90.190.20 324 468 7.0E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 Gene3D G3DSA:3.40.1190.10 106 321 2.1E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 Pfam PF08245 Mur ligase middle domain 120 303 3.0E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 14 471 6.4E-119 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 SUPERFAMILY SSF53244 323 471 3.43E-23 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_08515 6ac9ef66bfbd06b1422bc2201e68e839 476 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 390 4.2E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 PRINTS PR00834 HtrA/DegQ protease family signature 159 179 6.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 PRINTS PR00834 HtrA/DegQ protease family signature 344 356 6.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 PRINTS PR00834 HtrA/DegQ protease family signature 258 275 6.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 PRINTS PR00834 HtrA/DegQ protease family signature 138 150 6.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 PRINTS PR00834 HtrA/DegQ protease family signature 201 225 6.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 6.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 Pfam PF13365 Trypsin-like peptidase domain 126 265 5.7E-29 T 14-10-2018 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 Gene3D G3DSA:2.30.42.10 303 402 2.4E-21 T 14-10-2018 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 Gene3D G3DSA:2.40.10.120 62 297 2.8E-65 T 14-10-2018 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 SUPERFAMILY SSF50156 410 494 3.94E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 Gene3D G3DSA:2.30.42.60 403 499 2.5E-17 T 14-10-2018 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 SMART SM00228 304 386 2.0E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 SMART SM00228 412 490 6.1E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 SUPERFAMILY SSF50494 65 296 7.34E-53 T 14-10-2018 IPR009003 Peptidase S1, PA clan JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 494 6.4E-134 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 SUPERFAMILY SSF50156 255 402 9.86E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 Pfam PF13180 PDZ domain 423 494 3.2E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_06300 e7e2b00de34dc2202567a3b4216070d8 500 Pfam PF13180 PDZ domain 305 394 2.7E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JO41_04305 f68e6542eee53a1f7692f8f31133a9c9 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 225 1.1E-23 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 286 484 6.3E-18 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 PRINTS PR00988 Uridine kinase signature 316 327 6.3E-7 T 14-10-2018 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 PRINTS PR00988 Uridine kinase signature 361 376 6.3E-7 T 14-10-2018 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 PRINTS PR00988 Uridine kinase signature 284 301 6.3E-7 T 14-10-2018 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 SMART SM00382 283 444 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 Gene3D G3DSA:3.30.980.10 66 211 2.7E-19 T 14-10-2018 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 SUPERFAMILY SSF55186 66 233 1.7E-28 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 Gene3D G3DSA:3.40.50.300 224 496 6.6E-57 T 14-10-2018 JO41_00495 73aea823ce53403fb01f6c8516c7c558 550 SUPERFAMILY SSF52540 282 482 1.05E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02490 dbaf7da6a82e20ed9759e8e8a97d88be 209 Gene3D G3DSA:3.40.50.2020 1 207 3.5E-53 T 14-10-2018 JO41_02490 dbaf7da6a82e20ed9759e8e8a97d88be 209 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 9 169 7.0E-37 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02490 dbaf7da6a82e20ed9759e8e8a97d88be 209 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 209 23.549 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_02490 dbaf7da6a82e20ed9759e8e8a97d88be 209 Pfam PF00156 Phosphoribosyl transferase domain 51 166 3.4E-16 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO41_02490 dbaf7da6a82e20ed9759e8e8a97d88be 209 SUPERFAMILY SSF53271 7 202 4.88E-44 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO41_01755 944e6d83a780c0431eec34dc0a73009d 272 Gene3D G3DSA:3.40.190.10 129 220 9.2E-50 T 14-10-2018 JO41_01755 944e6d83a780c0431eec34dc0a73009d 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 262 7.1E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO41_01755 944e6d83a780c0431eec34dc0a73009d 272 SUPERFAMILY SSF53850 1 264 1.49E-48 T 14-10-2018 JO41_01755 944e6d83a780c0431eec34dc0a73009d 272 SMART SM00062 43 264 1.3E-42 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JO41_01755 944e6d83a780c0431eec34dc0a73009d 272 Gene3D G3DSA:3.40.190.10 45 262 9.2E-50 T 14-10-2018 JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 TIGRFAM TIGR01178 ade: adenine deaminase 17 585 7.6E-172 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 SUPERFAMILY SSF51556 67 325 6.32E-30 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 Gene3D G3DSA:3.20.20.140 67 320 4.6E-126 T 14-10-2018 JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 Hamap MF_01518 Adenine deaminase [ade]. 17 585 34.949 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 Gene3D G3DSA:2.30.40.10 9 355 4.6E-126 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 Pfam PF13382 Adenine deaminase C-terminal domain 432 583 2.4E-53 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 SUPERFAMILY SSF51338 12 360 2.95E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_07580 c95d770a37d21b9573f5057ce6a2ebea 585 Pfam PF01979 Amidohydrolase family 63 353 2.4E-26 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 3.1E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 Gene3D G3DSA:2.30.170.50 1 67 1.3E-33 T 14-10-2018 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.0E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.0E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 SUPERFAMILY SSF143800 1 64 3.77E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 30.276 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00525 788edc3f4e8b4d0c898dc810822e4a93 67 Pfam PF01197 Ribosomal protein L31 1 63 1.5E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_08095 278ca3912b59bb282051420a9b603543 110 Pfam PF09639 YjcQ protein 9 103 2.2E-27 T 14-10-2018 IPR018597 Bacteriophage Tuc2009, YjcQ JO41_08095 278ca3912b59bb282051420a9b603543 110 SUPERFAMILY SSF46785 7 91 2.39E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_08095 278ca3912b59bb282051420a9b603543 110 Gene3D G3DSA:1.10.10.10 5 93 4.2E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_03810 3bb82aa3cf9a8e9c4b250b8755caf4de 395 SUPERFAMILY SSF103473 4 381 1.14E-43 T 14-10-2018 IPR036259 MFS transporter superfamily JO41_03810 3bb82aa3cf9a8e9c4b250b8755caf4de 395 Gene3D G3DSA:1.20.1250.20 2 186 2.1E-19 T 14-10-2018 JO41_03810 3bb82aa3cf9a8e9c4b250b8755caf4de 395 Pfam PF07690 Major Facilitator Superfamily 12 318 1.0E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JO41_03810 3bb82aa3cf9a8e9c4b250b8755caf4de 395 Gene3D G3DSA:1.20.1250.20 200 385 8.9E-32 T 14-10-2018 JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 Gene3D G3DSA:3.40.50.300 257 462 2.5E-78 T 14-10-2018 JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 Gene3D G3DSA:2.40.50.140 47 143 2.7E-6 T 14-10-2018 JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 669 6.9E-231 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 Gene3D G3DSA:3.40.50.300 463 635 2.3E-53 T 14-10-2018 JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 SMART SM00490 510 594 1.5E-19 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 SUPERFAMILY SSF52540 322 605 5.22E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 Pfam PF00271 Helicase conserved C-terminal domain 473 593 2.0E-16 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 SUPERFAMILY SSF50249 5 170 8.91E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 SMART SM00487 270 465 4.5E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 Pfam PF17191 RecG wedge domain 13 167 4.4E-20 T 14-10-2018 IPR033454 RecG, wedge domain JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 Gene3D G3DSA:1.10.150.20 6 46 4.8E-5 T 14-10-2018 JO41_01985 6e982070c07d70f11ceb0b37a0e3c704 688 Pfam PF00270 DEAD/DEAH box helicase 297 439 1.1E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_01085 4d9a82c6f489ebf0190badfc621d1431 88 SUPERFAMILY SSF55103 42 61 4.09E-5 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 3 578 16.226 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 Pfam PF14849 YidC periplasmic domain 79 331 2.6E-15 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 376 575 3.1E-63 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 2 374 2.6E-26 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 PRINTS PR00701 60kDa inner membrane protein signature 84 105 1.8E-13 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 PRINTS PR00701 60kDa inner membrane protein signature 173 193 1.8E-13 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 PRINTS PR00701 60kDa inner membrane protein signature 261 276 1.8E-13 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 PRINTS PR00701 60kDa inner membrane protein signature 438 461 1.8E-13 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 PRINTS PR01900 YidC translocation/secretion protein signature 531 555 1.8E-6 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 PRINTS PR01900 YidC translocation/secretion protein signature 507 522 1.8E-6 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 PRINTS PR01900 YidC translocation/secretion protein signature 362 378 1.8E-6 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 Pfam PF02096 60Kd inner membrane protein 377 575 1.0E-58 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JO41_03450 618c1fb6c5c0ab3572be688ee875e9bd 586 Gene3D G3DSA:2.70.98.90 75 333 9.0E-11 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily JO41_11825 1297c6b6a80f22bd19ea96108af17dc6 358 PIRSF PIRSF001455 8 358 1.3E-99 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JO41_11825 1297c6b6a80f22bd19ea96108af17dc6 358 SUPERFAMILY SSF56796 33 357 1.09E-77 T 14-10-2018 JO41_11825 1297c6b6a80f22bd19ea96108af17dc6 358 Gene3D G3DSA:1.20.1090.10 169 358 6.2E-50 T 14-10-2018 JO41_11825 1297c6b6a80f22bd19ea96108af17dc6 358 Gene3D G3DSA:3.40.50.1970 15 167 2.7E-43 T 14-10-2018 JO41_11825 1297c6b6a80f22bd19ea96108af17dc6 358 Pfam PF01761 3-dehydroquinate synthase 63 328 6.6E-80 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JO41_04065 f2daee62b598c5bde0061bcaab65680b 251 Gene3D G3DSA:3.40.50.300 14 240 4.3E-53 T 14-10-2018 JO41_04065 f2daee62b598c5bde0061bcaab65680b 251 SMART SM00382 51 222 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04065 f2daee62b598c5bde0061bcaab65680b 251 Pfam PF00005 ABC transporter 43 173 2.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04065 f2daee62b598c5bde0061bcaab65680b 251 SUPERFAMILY SSF52540 19 224 7.46E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11790 e67e0fb99b5a31b012c69ed87fbc2003 93 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 9.8E-19 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11790 e67e0fb99b5a31b012c69ed87fbc2003 93 Pfam PF01250 Ribosomal protein S6 3 90 1.3E-16 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11790 e67e0fb99b5a31b012c69ed87fbc2003 93 SUPERFAMILY SSF54995 1 93 6.93E-22 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11790 e67e0fb99b5a31b012c69ed87fbc2003 93 Gene3D G3DSA:3.30.70.60 1 93 1.1E-21 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JO41_11790 e67e0fb99b5a31b012c69ed87fbc2003 93 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 93 16.784 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 121 3.1E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 SUPERFAMILY SSF50104 1 62 2.29E-16 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 Pfam PF09285 Elongation factor P, C-terminal 130 184 2.5E-22 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 Gene3D G3DSA:2.40.50.140 64 127 5.6E-22 T 14-10-2018 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 SMART SM01185 67 121 2.4E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 SMART SM00841 129 184 1.0E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 47.227 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 SUPERFAMILY SSF50249 65 126 4.03E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 1.4E-70 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 Gene3D G3DSA:2.30.30.30 1 63 8.4E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 60 2.8E-19 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 Gene3D G3DSA:2.40.50.140 128 187 7.9E-23 T 14-10-2018 JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 SUPERFAMILY SSF50249 130 185 1.44E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_05440 ec827201bfe1df8df1d7efa5aec8dd35 187 PIRSF PIRSF005901 1 186 7.3E-70 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP JO41_10915 edf901cbe7fb2945a61b47fdcf313274 328 Gene3D G3DSA:3.10.290.10 4 66 9.8E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JO41_10915 edf901cbe7fb2945a61b47fdcf313274 328 SUPERFAMILY SSF55120 73 322 1.27E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_10915 edf901cbe7fb2945a61b47fdcf313274 328 SUPERFAMILY SSF55174 15 101 1.0E-6 T 14-10-2018 JO41_10915 edf901cbe7fb2945a61b47fdcf313274 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 319 9.1E-65 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_10915 edf901cbe7fb2945a61b47fdcf313274 328 Pfam PF00849 RNA pseudouridylate synthase 87 259 2.7E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_10915 edf901cbe7fb2945a61b47fdcf313274 328 Gene3D G3DSA:3.30.2350.10 70 309 1.1E-62 T 14-10-2018 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 547 642 3.9E-10 T 14-10-2018 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 Gene3D G3DSA:1.50.10.20 1411 1667 6.8E-35 T 14-10-2018 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 SMART SM01359 1013 1155 1.3E-30 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 SMART SM01360 1218 1307 2.2E-17 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 Pfam PF01835 MG2 domain 648 729 1.6E-11 T 14-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1417 1442 1.9E-5 T 14-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1015 1154 3.2E-15 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 Pfam PF00207 Alpha-2-macroglobulin family 1229 1307 1.9E-11 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 SUPERFAMILY SSF48239 1415 1665 5.76E-40 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid JO41_11505 7fd831d813e33f153f596eb56f4489b5 1871 Gene3D G3DSA:2.60.40.10 1260 1359 1.8E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_04385 0b065c3bb72824bcd8e91eb68eb4f2b4 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site JO41_04385 0b065c3bb72824bcd8e91eb68eb4f2b4 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 17.179 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04385 0b065c3bb72824bcd8e91eb68eb4f2b4 61 SUPERFAMILY SSF55129 3 61 2.62E-18 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JO41_04385 0b065c3bb72824bcd8e91eb68eb4f2b4 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.2E-21 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04385 0b065c3bb72824bcd8e91eb68eb4f2b4 61 Gene3D G3DSA:3.30.1390.20 1 59 1.6E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JO41_04385 0b065c3bb72824bcd8e91eb68eb4f2b4 61 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 1.5E-15 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JO41_04385 0b065c3bb72824bcd8e91eb68eb4f2b4 61 PIRSF PIRSF002211 1 61 3.0E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_02535 fa8243c407eaf9d88458b073eb9c98a2 166 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 115 160 1.0E-15 T 14-10-2018 JO41_02535 fa8243c407eaf9d88458b073eb9c98a2 166 Pfam PF04191 Phospholipid methyltransferase 67 149 2.4E-12 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 JO41_02535 fa8243c407eaf9d88458b073eb9c98a2 166 Gene3D G3DSA:1.20.120.1630 2 162 8.6E-30 T 14-10-2018 JO41_06045 6f8695b40581de4a629b44d71b3e8461 391 TIGRFAM TIGR00261 traB: TraB family protein 10 388 8.3E-107 T 14-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal JO41_06045 6f8695b40581de4a629b44d71b3e8461 391 Pfam PF01963 TraB family 6 230 2.4E-36 T 14-10-2018 IPR002816 Pheromone shutdown, TraB JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 Pfam PF01416 tRNA pseudouridine synthase 18 118 1.7E-9 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 Pfam PF01416 tRNA pseudouridine synthase 159 260 5.5E-21 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 Gene3D G3DSA:3.30.70.580 9 120 4.8E-34 T 14-10-2018 JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 Gene3D G3DSA:3.30.70.660 121 258 3.2E-38 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 SUPERFAMILY SSF55120 11 265 2.45E-75 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 11 254 2.5E-53 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 PIRSF PIRSF001430 10 274 3.1E-74 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_12640 83c6b70e5117f09e29bb552d87667cd3 275 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 11 259 32.389 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_01175 01b85cf2bd8b1ae3d241e9e769888602 279 Pfam PF03799 Cell division protein FtsQ 142 250 3.5E-4 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB JO41_01175 01b85cf2bd8b1ae3d241e9e769888602 279 Pfam PF08478 POTRA domain, FtsQ-type 59 124 2.7E-13 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type JO41_10660 f7a2f90817b8054ea8f74899f4a0b5e5 321 Gene3D G3DSA:3.60.15.10 54 310 6.6E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_10660 f7a2f90817b8054ea8f74899f4a0b5e5 321 Pfam PF12706 Beta-lactamase superfamily domain 74 280 1.8E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_10660 f7a2f90817b8054ea8f74899f4a0b5e5 321 SUPERFAMILY SSF56281 1 299 8.39E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_10660 f7a2f90817b8054ea8f74899f4a0b5e5 321 SMART SM00849 61 257 1.8E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_08435 6a6c723968a14f7111e443e116257fa7 539 SUPERFAMILY SSF53623 113 371 2.88E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 34 532 1.1E-155 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 Gene3D G3DSA:3.90.190.20 378 538 2.6E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 SUPERFAMILY SSF53244 374 535 4.71E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 Pfam PF08245 Mur ligase middle domain 122 352 3.6E-39 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 Gene3D G3DSA:3.40.1390.10 15 112 1.1E-20 T 14-10-2018 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 Pfam PF01225 Mur ligase family, catalytic domain 35 108 4.8E-12 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 Gene3D G3DSA:3.40.1190.10 113 377 1.5E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 16 532 30.43 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JO41_08435 6a6c723968a14f7111e443e116257fa7 539 SUPERFAMILY SSF63418 18 112 2.62E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal JO41_08435 6a6c723968a14f7111e443e116257fa7 539 Pfam PF02875 Mur ligase family, glutamate ligase domain 374 460 6.9E-17 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JO41_03175 d912640a44880e12565b5500c74ad180 480 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 32 476 3.3E-84 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_03175 d912640a44880e12565b5500c74ad180 480 Gene3D G3DSA:2.30.250.10 106 260 3.8E-140 T 14-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 JO41_03175 d912640a44880e12565b5500c74ad180 480 SUPERFAMILY SSF101821 107 256 6.5E-30 T 14-10-2018 JO41_03175 d912640a44880e12565b5500c74ad180 480 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 128 148 3.3E-27 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_03175 d912640a44880e12565b5500c74ad180 480 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 350 366 3.3E-27 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_03175 d912640a44880e12565b5500c74ad180 480 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 444 459 3.3E-27 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_03175 d912640a44880e12565b5500c74ad180 480 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 95 111 3.3E-27 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_03175 d912640a44880e12565b5500c74ad180 480 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 164 181 3.3E-27 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_03175 d912640a44880e12565b5500c74ad180 480 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 306 324 3.3E-27 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_03175 d912640a44880e12565b5500c74ad180 480 Gene3D G3DSA:3.40.630.10 45 467 3.8E-140 T 14-10-2018 JO41_03175 d912640a44880e12565b5500c74ad180 480 SUPERFAMILY SSF53187 9 478 2.54E-92 T 14-10-2018 JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 Pfam PF00574 Clp protease 20 195 5.3E-68 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 SUPERFAMILY SSF52096 22 198 3.13E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 PRINTS PR00127 Clp protease catalytic subunit P signature 22 37 1.2E-30 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 PRINTS PR00127 Clp protease catalytic subunit P signature 93 110 1.2E-30 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 PRINTS PR00127 Clp protease catalytic subunit P signature 171 190 1.2E-30 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 PRINTS PR00127 Clp protease catalytic subunit P signature 114 133 1.2E-30 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 PRINTS PR00127 Clp protease catalytic subunit P signature 62 82 1.2E-30 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 115 128 - T 14-10-2018 IPR033135 ClpP, histidine active site JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 Gene3D G3DSA:3.90.226.10 3 198 2.0E-64 T 14-10-2018 JO41_08720 4b54cdbe6eb9a9d08b567ac5364abcb4 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 196 35.414 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JO41_05980 569887ba04ae0022271ff282feae4b41 498 SUPERFAMILY SSF49265 399 488 1.61E-10 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 JO41_05980 569887ba04ae0022271ff282feae4b41 498 SMART SM00060 402 483 2.7E-4 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 JO41_05980 569887ba04ae0022271ff282feae4b41 498 Gene3D G3DSA:2.60.120.200 123 287 9.6E-8 T 14-10-2018 JO41_05980 569887ba04ae0022271ff282feae4b41 498 SUPERFAMILY SSF49899 134 282 8.11E-9 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JO41_05980 569887ba04ae0022271ff282feae4b41 498 Gene3D G3DSA:2.60.40.10 402 492 7.3E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_02650 beff739599459423f11544363263343a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 1.4E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.4E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 1.4E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 1.4E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 1.4E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 PIRSF PIRSF001529 1 424 1.7E-149 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 SUPERFAMILY SSF55681 116 421 1.87E-84 T 14-10-2018 JO41_02650 beff739599459423f11544363263343a 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 3.2E-149 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 SUPERFAMILY SSF46589 1 111 1.1E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JO41_02650 beff739599459423f11544363263343a 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 37.488 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JO41_02650 beff739599459423f11544363263343a 424 Gene3D G3DSA:1.10.287.40 1 103 1.2E-19 T 14-10-2018 JO41_02650 beff739599459423f11544363263343a 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 217 399 1.1E-31 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_02650 beff739599459423f11544363263343a 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 1.2E-21 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 JO41_02650 beff739599459423f11544363263343a 424 Gene3D G3DSA:3.30.930.10 104 424 3.7E-129 T 14-10-2018 JO41_03025 45963d52bfb14291704a800196505e70 251 PIRSF PIRSF009320 3 86 6.1E-15 T 14-10-2018 JO41_03025 45963d52bfb14291704a800196505e70 251 PIRSF PIRSF009320 91 251 6.9E-6 T 14-10-2018 JO41_03025 45963d52bfb14291704a800196505e70 251 Gene3D G3DSA:3.40.50.300 2 251 1.0E-77 T 14-10-2018 JO41_03025 45963d52bfb14291704a800196505e70 251 Pfam PF13614 AAA domain 4 176 3.3E-59 T 14-10-2018 IPR025669 AAA domain JO41_03025 45963d52bfb14291704a800196505e70 251 SUPERFAMILY SSF52540 2 250 1.69E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05245 6c4031d421d0761af458643f02d98da9 134 PIRSF PIRSF003230 2 127 7.7E-25 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JO41_05245 6c4031d421d0761af458643f02d98da9 134 SUPERFAMILY SSF54637 5 123 3.03E-34 T 14-10-2018 IPR029069 HotDog domain superfamily JO41_05245 6c4031d421d0761af458643f02d98da9 134 Pfam PF13279 Thioesterase-like superfamily 10 122 1.6E-15 T 14-10-2018 JO41_05245 6c4031d421d0761af458643f02d98da9 134 Gene3D G3DSA:3.10.129.10 2 126 9.9E-34 T 14-10-2018 JO41_05245 6c4031d421d0761af458643f02d98da9 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 121 1.6E-22 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SMART SM00260 647 787 5.7E-47 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 652 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 609 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 633 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 573 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Gene3D G3DSA:2.40.50.180 678 742 4.1E-40 T 14-10-2018 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Gene3D G3DSA:2.30.30.40 655 783 4.1E-40 T 14-10-2018 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Pfam PF01627 Hpt domain 11 100 5.0E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SUPERFAMILY SSF47226 10 129 4.45E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SMART SM00387 514 655 3.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SUPERFAMILY SSF55052 191 261 2.56E-12 T 14-10-2018 IPR035891 CheY-binding domain of CheA JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Pfam PF01584 CheW-like domain 659 788 3.0E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Gene3D G3DSA:1.20.120.160 5 145 4.3E-37 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SUPERFAMILY SSF55874 471 653 3.93E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 518 654 4.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Pfam PF07194 P2 response regulator binding domain 194 267 1.5E-11 T 14-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Gene3D G3DSA:3.30.565.10 468 654 6.2E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SUPERFAMILY SSF50341 654 787 2.35E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 345 469 3.9E-29 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Gene3D G3DSA:3.30.70.1110 191 272 1.2E-5 T 14-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SMART SM01231 344 469 5.5E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 Gene3D G3DSA:1.10.287.560 345 413 1.1E-5 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SMART SM00073 9 106 2.2E-30 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JO41_00630 9f5cdd64d660258bfe21418b02eea237 806 SUPERFAMILY SSF47384 346 379 3.92E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JO41_10635 e3d38b3ece4db4f57b493d491db7b741 308 Gene3D G3DSA:2.40.30.90 193 307 3.2E-33 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal JO41_10635 e3d38b3ece4db4f57b493d491db7b741 308 SUPERFAMILY SSF102522 33 186 7.32E-53 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal JO41_10635 e3d38b3ece4db4f57b493d491db7b741 308 SUPERFAMILY SSF101852 197 302 1.44E-23 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal JO41_10635 e3d38b3ece4db4f57b493d491db7b741 308 Gene3D G3DSA:3.40.50.10790 30 192 3.8E-50 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal JO41_10635 e3d38b3ece4db4f57b493d491db7b741 308 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 35 298 9.4E-71 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase JO41_10635 e3d38b3ece4db4f57b493d491db7b741 308 PIRSF PIRSF006779 29 304 3.0E-90 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase JO41_04055 b251cda1890c0b680c768e341e1f595b 178 SUPERFAMILY SSF56214 76 163 4.45E-16 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO41_04055 b251cda1890c0b680c768e341e1f595b 178 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 77 146 5.5E-12 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO41_04055 b251cda1890c0b680c768e341e1f595b 178 SUPERFAMILY SSF56214 13 69 1.28E-8 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO41_04055 b251cda1890c0b680c768e341e1f595b 178 Gene3D G3DSA:3.90.470.20 77 164 2.2E-15 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JO41_11245 847acb42bb4052b360e26d2281268659 795 SUPERFAMILY SSF82866 204 389 4.05E-24 T 14-10-2018 JO41_11245 847acb42bb4052b360e26d2281268659 795 SUPERFAMILY SSF82866 576 788 2.62E-28 T 14-10-2018 JO41_11245 847acb42bb4052b360e26d2281268659 795 Pfam PF03176 MMPL family 576 785 1.3E-6 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO41_11245 847acb42bb4052b360e26d2281268659 795 Pfam PF03176 MMPL family 90 423 3.0E-13 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JO41_11245 847acb42bb4052b360e26d2281268659 795 Gene3D G3DSA:1.20.1640.10 204 403 1.8E-9 T 14-10-2018 JO41_11245 847acb42bb4052b360e26d2281268659 795 Gene3D G3DSA:1.20.1640.10 620 795 3.7E-11 T 14-10-2018 JO41_11050 74f9913d50814cb1d2586c6b4d5aa39c 349 Gene3D G3DSA:3.40.50.300 110 346 9.1E-27 T 14-10-2018 JO41_11050 74f9913d50814cb1d2586c6b4d5aa39c 349 ProSitePatterns PS00211 ABC transporters family signature. 240 254 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11050 74f9913d50814cb1d2586c6b4d5aa39c 349 SUPERFAMILY SSF52540 121 320 3.58E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11050 74f9913d50814cb1d2586c6b4d5aa39c 349 SMART SM00382 126 311 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11050 74f9913d50814cb1d2586c6b4d5aa39c 349 Pfam PF00005 ABC transporter 122 267 4.4E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09740 d5ee83cb2ff2745b3662ad43639cd479 183 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 2 174 4.7E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_09740 d5ee83cb2ff2745b3662ad43639cd479 183 SUPERFAMILY SSF53254 2 164 5.78E-16 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO41_09740 d5ee83cb2ff2745b3662ad43639cd479 183 SMART SM00855 1 153 0.0044 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_09740 d5ee83cb2ff2745b3662ad43639cd479 183 Gene3D G3DSA:3.40.50.1240 1 178 2.4E-13 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO41_04025 5eb39c5a77b8932390da99672afba09e 309 SUPERFAMILY SSF75217 158 294 3.49E-28 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO41_04025 5eb39c5a77b8932390da99672afba09e 309 Pfam PF00588 SpoU rRNA Methylase family 160 293 2.2E-27 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JO41_04025 5eb39c5a77b8932390da99672afba09e 309 Gene3D G3DSA:3.40.1280.10 160 303 2.0E-31 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_04975 52c1430791c299f9bccbe274f150b098 539 Pfam PF09820 Predicted AAA-ATPase 8 292 4.1E-105 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO41_04975 52c1430791c299f9bccbe274f150b098 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 439 532 2.2E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO41_04975 52c1430791c299f9bccbe274f150b098 539 SUPERFAMILY SSF52540 35 226 1.86E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05755 6071bddfb29db9691711677f10d02a43 339 Gene3D G3DSA:1.10.3470.10 2 335 2.0E-96 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_05755 6071bddfb29db9691711677f10d02a43 339 Pfam PF01032 FecCD transport family 18 330 7.7E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JO41_05755 6071bddfb29db9691711677f10d02a43 339 SUPERFAMILY SSF81345 3 331 8.24E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_04350 2580e93bb1a6fe42ce5eade225794b9b 147 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.59 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04350 2580e93bb1a6fe42ce5eade225794b9b 147 Pfam PF01196 Ribosomal protein L17 20 116 3.7E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04350 2580e93bb1a6fe42ce5eade225794b9b 147 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.7E-46 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04350 2580e93bb1a6fe42ce5eade225794b9b 147 SUPERFAMILY SSF64263 1 118 8.5E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04350 2580e93bb1a6fe42ce5eade225794b9b 147 Gene3D G3DSA:3.90.1030.10 1 116 9.2E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_12430 68dd7e99c060afb656b669d8d8a6be0f 160 Pfam PF00583 Acetyltransferase (GNAT) family 19 143 1.2E-11 T 14-10-2018 IPR000182 GNAT domain JO41_12430 68dd7e99c060afb656b669d8d8a6be0f 160 SUPERFAMILY SSF55729 2 149 4.08E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_12430 68dd7e99c060afb656b669d8d8a6be0f 160 Gene3D G3DSA:3.40.630.30 48 157 9.5E-21 T 14-10-2018 JO41_01585 cf1a220e251daf3190e5178aff01395d 257 Pfam PF01026 TatD related DNase 4 254 3.4E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 JO41_01585 cf1a220e251daf3190e5178aff01395d 257 Gene3D G3DSA:3.20.20.140 1 257 2.5E-72 T 14-10-2018 JO41_01585 cf1a220e251daf3190e5178aff01395d 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 9.7E-79 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 JO41_01585 cf1a220e251daf3190e5178aff01395d 257 SUPERFAMILY SSF51556 1 255 7.36E-71 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_01585 cf1a220e251daf3190e5178aff01395d 257 PIRSF PIRSF005902 1 257 2.8E-68 T 14-10-2018 IPR001130 TatD family GO:0016788 JO41_01075 5fe08d2b9eb85d0d93fbc0f60c2d3da9 105 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 13 89 1.5E-32 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 JO41_01075 5fe08d2b9eb85d0d93fbc0f60c2d3da9 105 SMART SM00530 20 76 6.1E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO41_01075 5fe08d2b9eb85d0d93fbc0f60c2d3da9 105 Pfam PF01381 Helix-turn-helix 28 75 1.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO41_01075 5fe08d2b9eb85d0d93fbc0f60c2d3da9 105 SUPERFAMILY SSF47413 16 99 2.62E-26 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO41_01075 5fe08d2b9eb85d0d93fbc0f60c2d3da9 105 Gene3D G3DSA:1.10.260.40 7 104 9.4E-35 T 14-10-2018 JO41_02360 ab1b8da48946e94c5caedc66efb83595 341 SUPERFAMILY SSF51261 189 332 3.61E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_02360 ab1b8da48946e94c5caedc66efb83595 341 Pfam PF01551 Peptidase family M23 233 328 4.4E-30 T 14-10-2018 IPR016047 Peptidase M23 JO41_02360 ab1b8da48946e94c5caedc66efb83595 341 Gene3D G3DSA:2.70.70.10 185 336 2.7E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_08525 31b18654167b472b414542f931436f2a 473 Gene3D G3DSA:3.30.930.10 108 472 1.8E-115 T 14-10-2018 JO41_08525 31b18654167b472b414542f931436f2a 473 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 467 8.4E-84 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_08525 31b18654167b472b414542f931436f2a 473 Gene3D G3DSA:2.40.50.140 1 107 3.5E-17 T 14-10-2018 JO41_08525 31b18654167b472b414542f931436f2a 473 Pfam PF01336 OB-fold nucleic acid binding domain 18 96 1.4E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JO41_08525 31b18654167b472b414542f931436f2a 473 SUPERFAMILY SSF55681 97 471 3.94E-99 T 14-10-2018 JO41_08525 31b18654167b472b414542f931436f2a 473 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 473 1.1E-191 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 JO41_08525 31b18654167b472b414542f931436f2a 473 SUPERFAMILY SSF50249 5 103 4.93E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_08525 31b18654167b472b414542f931436f2a 473 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 5 473 45.287 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 JO41_08525 31b18654167b472b414542f931436f2a 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 231 244 7.2E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_08525 31b18654167b472b414542f931436f2a 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 215 227 7.2E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_08525 31b18654167b472b414542f931436f2a 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 388 404 7.2E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_08525 31b18654167b472b414542f931436f2a 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 428 442 7.2E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_02455 24952ed6555f628a7f49005eca10d99e 833 Gene3D G3DSA:3.30.1490.20 1 180 1.8E-63 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO41_02455 24952ed6555f628a7f49005eca10d99e 833 SUPERFAMILY SSF52009 722 825 1.7E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JO41_02455 24952ed6555f628a7f49005eca10d99e 833 Gene3D G3DSA:3.30.470.20 181 330 9.5E-49 T 14-10-2018 JO41_02455 24952ed6555f628a7f49005eca10d99e 833 SUPERFAMILY SSF56059 3 321 2.94E-96 T 14-10-2018 JO41_02455 24952ed6555f628a7f49005eca10d99e 833 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 321 3.6E-104 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JO41_02455 24952ed6555f628a7f49005eca10d99e 833 Gene3D G3DSA:3.50.30.10 722 828 2.6E-34 T 14-10-2018 JO41_02455 24952ed6555f628a7f49005eca10d99e 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 750 821 4.9E-24 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JO41_00570 6574653c9d67fc79884f48e191e5c59d 160 Pfam PF10646 Sporulation and spore germination 37 146 4.6E-5 T 14-10-2018 IPR019606 GerMN domain JO41_04230 2679a49722e7e2eb8772dee09a4ab668 98 Gene3D G3DSA:1.10.260.40 2 96 6.1E-23 T 14-10-2018 JO41_04230 2679a49722e7e2eb8772dee09a4ab668 98 Pfam PF01381 Helix-turn-helix 18 68 2.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO41_04230 2679a49722e7e2eb8772dee09a4ab668 98 SUPERFAMILY SSF47413 11 93 6.76E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO41_04230 2679a49722e7e2eb8772dee09a4ab668 98 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 82 3.0E-25 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 JO41_04230 2679a49722e7e2eb8772dee09a4ab668 98 SMART SM00530 9 69 6.7E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO41_06120 b1de3325551576cf8c19121abbcda919 189 Pfam PF13563 2'-5' RNA ligase superfamily 25 176 1.6E-15 T 14-10-2018 JO41_06120 b1de3325551576cf8c19121abbcda919 189 SUPERFAMILY SSF55144 10 180 6.28E-22 T 14-10-2018 IPR009097 Cyclic phosphodiesterase JO41_06120 b1de3325551576cf8c19121abbcda919 189 Gene3D G3DSA:3.90.1140.10 10 187 7.4E-22 T 14-10-2018 JO41_05015 d08d778c35d2081073d0936267bbb94c 570 Pfam PF13360 PQQ-like domain 30 198 4.8E-7 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat JO41_05015 d08d778c35d2081073d0936267bbb94c 570 SUPERFAMILY SSF50998 24 317 7.46E-19 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JO41_09580 79ef8069bb161f0bbf482764a1d7bab9 194 SUPERFAMILY SSF109604 11 156 1.67E-19 T 14-10-2018 JO41_09580 79ef8069bb161f0bbf482764a1d7bab9 194 Gene3D G3DSA:1.10.3210.10 3 169 2.9E-14 T 14-10-2018 JO41_00455 821c8b93af3895cbf384d34afd16e8c7 170 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 4 155 1.0E-45 T 14-10-2018 IPR019935 Conserved hypothetical protein CHP03546 JO41_00455 821c8b93af3895cbf384d34afd16e8c7 170 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 8 139 2.2E-7 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 JO41_01540 39728b9ae05a8a0dc3319b4dfc12cd02 401 Pfam PF01368 DHH family 41 177 2.4E-7 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_01540 39728b9ae05a8a0dc3319b4dfc12cd02 401 Gene3D G3DSA:3.90.1640.10 20 241 2.6E-23 T 14-10-2018 JO41_01540 39728b9ae05a8a0dc3319b4dfc12cd02 401 SUPERFAMILY SSF64182 41 301 2.75E-23 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO41_06175 080d677ccb0d707ed67b1f7d1abf1a6d 206 Gene3D G3DSA:3.90.220.20 19 153 9.6E-23 T 14-10-2018 JO41_06175 080d677ccb0d707ed67b1f7d1abf1a6d 206 Pfam PF01420 Type I restriction modification DNA specificity domain 28 176 5.1E-11 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO41_06175 080d677ccb0d707ed67b1f7d1abf1a6d 206 SUPERFAMILY SSF116734 25 201 1.36E-25 T 14-10-2018 JO41_06175 080d677ccb0d707ed67b1f7d1abf1a6d 206 Gene3D G3DSA:1.10.287.1120 6 193 9.6E-23 T 14-10-2018 JO41_05825 054d5769fee546fb7bc279b78e4977f7 446 Pfam PF05525 Branched-chain amino acid transport protein 7 432 1.0E-120 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 JO41_05825 054d5769fee546fb7bc279b78e4977f7 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 12 424 9.7E-106 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 Gene3D G3DSA:3.40.50.300 259 503 2.8E-42 T 14-10-2018 JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 Pfam PF00005 ABC transporter 29 176 1.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 Pfam PF00005 ABC transporter 280 436 5.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 Gene3D G3DSA:3.40.50.300 5 246 2.4E-57 T 14-10-2018 JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 SUPERFAMILY SSF52540 262 499 8.62E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 SUPERFAMILY SSF52540 10 236 8.81E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 SMART SM00382 36 224 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_03265 3a29d98cc006bbd4b9843d6e93fe9526 521 SMART SM00382 289 485 19.0 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_07635 0b1f345a8ab263c1b4611cb94ad79afa 398 SUPERFAMILY SSF102114 3 375 4.84E-78 T 14-10-2018 JO41_07635 0b1f345a8ab263c1b4611cb94ad79afa 398 Pfam PF06969 HemN C-terminal domain 310 369 9.7E-9 T 14-10-2018 IPR010723 HemN, C-terminal JO41_07635 0b1f345a8ab263c1b4611cb94ad79afa 398 Gene3D G3DSA:3.80.30.20 1 298 3.4E-76 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO41_07635 0b1f345a8ab263c1b4611cb94ad79afa 398 Pfam PF04055 Radical SAM superfamily 8 176 1.2E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_07635 0b1f345a8ab263c1b4611cb94ad79afa 398 SMART SM00729 3 223 2.2E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 Gene3D G3DSA:3.30.540.10 4 139 2.7E-34 T 14-10-2018 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 SUPERFAMILY SSF56655 9 259 6.02E-55 T 14-10-2018 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 Pfam PF00459 Inositol monophosphatase family 29 255 1.6E-43 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.0E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.0E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.0E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.0E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.0E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.0E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JO41_07870 30a8c4b6e2b587f80b2aec095e989a7b 283 Gene3D G3DSA:3.40.190.80 141 277 1.5E-20 T 14-10-2018 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 SUPERFAMILY SSF53613 243 498 2.58E-46 T 14-10-2018 IPR029056 Ribokinase-like JO41_05110 8145f2721d45f96385433bacfe2270e1 503 PIRSF PIRSF017184 4 501 2.8E-94 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 7 230 8.6E-38 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 239 499 7.8E-42 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 SUPERFAMILY SSF64153 7 264 1.44E-45 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 Pfam PF01256 Carbohydrate kinase 270 494 1.3E-36 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 Gene3D G3DSA:3.40.1190.20 238 502 4.8E-65 T 14-10-2018 IPR029056 Ribokinase-like JO41_05110 8145f2721d45f96385433bacfe2270e1 503 Pfam PF03853 YjeF-related protein N-terminus 25 207 6.4E-30 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 242 503 15.781 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 444 454 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site JO41_05110 8145f2721d45f96385433bacfe2270e1 503 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 229 19.765 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JO41_05110 8145f2721d45f96385433bacfe2270e1 503 Gene3D G3DSA:3.40.50.10260 3 236 3.1E-47 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JO41_04795 2bef0f9259d21de0679607233ed8e5ef 407 Pfam PF12704 MacB-like periplasmic core domain 19 245 4.1E-20 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_04795 2bef0f9259d21de0679607233ed8e5ef 407 Pfam PF02687 FtsX-like permease family 307 401 2.1E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_04690 635d64ff96107844848f944f71e9ec12 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 274 6.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_04690 635d64ff96107844848f944f71e9ec12 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 379 557 5.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_04690 635d64ff96107844848f944f71e9ec12 566 SUPERFAMILY SSF161098 18 284 1.59E-49 T 14-10-2018 IPR035906 MetI-like superfamily JO41_04690 635d64ff96107844848f944f71e9ec12 566 Gene3D G3DSA:1.10.3720.10 16 285 8.2E-59 T 14-10-2018 IPR035906 MetI-like superfamily JO41_04690 635d64ff96107844848f944f71e9ec12 566 SUPERFAMILY SSF161098 304 558 2.71E-50 T 14-10-2018 IPR035906 MetI-like superfamily JO41_04690 635d64ff96107844848f944f71e9ec12 566 Gene3D G3DSA:1.10.3720.10 307 564 4.5E-50 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00355 8afe9e72b62185e6aa1b12cd4206dd5c 276 SUPERFAMILY SSF52141 85 271 2.22E-59 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_00355 8afe9e72b62185e6aa1b12cd4206dd5c 276 Pfam PF03167 Uracil DNA glycosylase superfamily 122 263 9.6E-46 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_00355 8afe9e72b62185e6aa1b12cd4206dd5c 276 SMART SM00987 116 263 3.2E-41 T 14-10-2018 JO41_00355 8afe9e72b62185e6aa1b12cd4206dd5c 276 Gene3D G3DSA:3.40.470.10 84 275 2.3E-72 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_00355 8afe9e72b62185e6aa1b12cd4206dd5c 276 SMART SM00986 116 263 3.2E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JO41_00355 8afe9e72b62185e6aa1b12cd4206dd5c 276 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 95 267 3.2E-65 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 SUPERFAMILY SSF52540 3 917 3.19E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 Gene3D G3DSA:3.40.50.300 772 943 6.4E-47 T 14-10-2018 JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 926 18.426 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 917 3.4E-65 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 SUPERFAMILY SSF57997 233 409 4.58E-7 T 14-10-2018 JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 Gene3D G3DSA:3.40.50.300 1 234 9.3E-53 T 14-10-2018 JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 PIRSF PIRSF005719 1 501 2.1E-105 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein JO41_12215 a58a01b87e558611bb57fb9e0a483b97 982 PIRSF PIRSF005719 424 932 1.6E-99 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 793 2.1E-21 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO41_11930 8df335113e403f7216a16a7bea0125f5 830 SMART SM01086 714 803 2.0E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO41_11930 8df335113e403f7216a16a7bea0125f5 830 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 1.3E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 1.3E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 1.3E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 1.3E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 SUPERFAMILY SSF52540 162 464 6.71E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11930 8df335113e403f7216a16a7bea0125f5 830 SUPERFAMILY SSF81923 15 153 4.45E-16 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 707 1.1E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Pfam PF02151 UvrB/uvrC motif 417 450 3.9E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 336 6.6E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Gene3D G3DSA:1.10.8.60 346 481 5.7E-40 T 14-10-2018 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Gene3D G3DSA:3.40.50.300 489 712 3.0E-80 T 14-10-2018 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 SUPERFAMILY SSF52540 486 797 3.66E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 4.3E-4 T 14-10-2018 IPR004176 Clp, N-terminal JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 67 1.8E-6 T 14-10-2018 IPR004176 Clp, N-terminal JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Gene3D G3DSA:1.10.8.60 714 810 3.5E-23 T 14-10-2018 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 SMART SM00382 537 676 4.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11930 8df335113e403f7216a16a7bea0125f5 830 SMART SM00382 200 343 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Gene3D G3DSA:1.10.1780.10 5 149 1.1E-21 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Gene3D G3DSA:3.40.50.300 150 343 5.4E-72 T 14-10-2018 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 Gene3D G3DSA:4.10.860.10 409 467 5.7E-40 T 14-10-2018 JO41_11930 8df335113e403f7216a16a7bea0125f5 830 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 SUPERFAMILY SSF47323 387 525 4.67E-28 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 522 1.3E-174 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Pfam PF09334 tRNA synthetases class I (M) 5 399 6.1E-157 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Gene3D G3DSA:2.20.28.20 138 172 2.1E-165 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 1.2E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 1.2E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 1.2E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 1.2E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 PRINTS PR01041 Methionyl-tRNA synthetase signature 386 397 1.2E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 1.2E-29 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 SUPERFAMILY SSF52374 2 386 7.19E-90 T 14-10-2018 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Pfam PF08264 Anticodon-binding domain of tRNA 438 511 5.4E-6 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Gene3D G3DSA:2.40.50.140 626 795 4.6E-32 T 14-10-2018 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 SUPERFAMILY SSF50249 634 784 4.41E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Gene3D G3DSA:1.10.730.10 382 576 1.5E-34 T 14-10-2018 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 576 37.766 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 SUPERFAMILY SSF57770 138 172 3.92E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Gene3D G3DSA:3.40.50.620 5 381 2.1E-165 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_10335 921f5bde6ac82695906d47c1a23c3995 795 Pfam PF01588 Putative tRNA binding domain 637 725 1.2E-22 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 Gene3D G3DSA:3.30.930.10 11 468 8.5E-225 T 14-10-2018 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 7.8E-42 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 SUPERFAMILY SSF55826 220 393 7.98E-28 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 SUPERFAMILY SSF55681 9 481 5.94E-88 T 14-10-2018 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 Gene3D G3DSA:3.40.50.800 4 553 8.5E-225 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JO41_11180 d34386007505b2a36328bf018d7d47f5 574 Pfam PF04073 Aminoacyl-tRNA editing domain 258 374 6.0E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.7E-12 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.7E-12 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.7E-12 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.7E-12 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 Pfam PF03129 Anticodon binding domain 478 567 7.8E-13 T 14-10-2018 IPR004154 Anticodon-binding JO41_11180 d34386007505b2a36328bf018d7d47f5 574 SUPERFAMILY SSF52954 466 570 5.89E-24 T 14-10-2018 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 2 557 2.3E-185 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 Gene3D G3DSA:3.90.960.10 240 392 8.5E-225 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO41_11180 d34386007505b2a36328bf018d7d47f5 574 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 37.284 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JO41_09995 d2d2760a16343df39e1f5e3e2822e9af 409 PIRSF PIRSF005243 1 408 6.5E-114 T 14-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 JO41_09995 d2d2760a16343df39e1f5e3e2822e9af 409 Pfam PF00753 Metallo-beta-lactamase superfamily 34 232 7.5E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_09995 d2d2760a16343df39e1f5e3e2822e9af 409 SMART SM00849 35 232 8.0E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_09995 d2d2760a16343df39e1f5e3e2822e9af 409 Gene3D G3DSA:3.40.50.360 260 394 8.9E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_09995 d2d2760a16343df39e1f5e3e2822e9af 409 SUPERFAMILY SSF56281 3 290 7.98E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_09995 d2d2760a16343df39e1f5e3e2822e9af 409 SUPERFAMILY SSF52218 259 402 6.29E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_09995 d2d2760a16343df39e1f5e3e2822e9af 409 Gene3D G3DSA:3.60.15.10 1 259 1.4E-80 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_09505 df3bf479eb7acffab082e7d357d050ad 448 SMART SM00962 227 423 1.1E-39 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_09505 df3bf479eb7acffab082e7d357d050ad 448 SMART SM00382 226 422 2.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09505 df3bf479eb7acffab082e7d357d050ad 448 Gene3D G3DSA:1.20.120.1380 173 413 6.5E-59 T 14-10-2018 JO41_09505 df3bf479eb7acffab082e7d357d050ad 448 SUPERFAMILY SSF52540 225 421 2.84E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09505 df3bf479eb7acffab082e7d357d050ad 448 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 318 1.3E-53 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 JO41_09505 df3bf479eb7acffab082e7d357d050ad 448 Pfam PF00448 SRP54-type protein, GTPase domain 228 421 6.0E-36 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_09505 df3bf479eb7acffab082e7d357d050ad 448 Gene3D G3DSA:3.40.50.300 222 411 6.5E-59 T 14-10-2018 JO41_03430 3424f0d4816eea160164f6ce0fa25dac 145 Pfam PF02699 Preprotein translocase subunit 19 93 5.0E-27 T 14-10-2018 IPR003849 Preprotein translocase YajC JO41_03430 3424f0d4816eea160164f6ce0fa25dac 145 PRINTS PR01853 Bacterial YajC preprotein translocase signature 16 36 1.7E-10 T 14-10-2018 IPR003849 Preprotein translocase YajC JO41_03430 3424f0d4816eea160164f6ce0fa25dac 145 PRINTS PR01853 Bacterial YajC preprotein translocase signature 54 72 1.7E-10 T 14-10-2018 IPR003849 Preprotein translocase YajC JO41_03430 3424f0d4816eea160164f6ce0fa25dac 145 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 16 96 2.9E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC JO41_03430 3424f0d4816eea160164f6ce0fa25dac 145 SMART SM01323 14 96 6.1E-38 T 14-10-2018 IPR003849 Preprotein translocase YajC JO41_04035 0bf3bfee5f0a94f01ed3f90269794fe3 94 SUPERFAMILY SSF101498 4 90 5.1E-9 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily JO41_04035 0bf3bfee5f0a94f01ed3f90269794fe3 94 Pfam PF04316 Anti-sigma-28 factor, FlgM 31 90 5.1E-12 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 329 1.3E-130 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 330 83.408 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 6.9E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 6.9E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 6.9E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 6.9E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 308 319 6.9E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 1.6E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.6E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.6E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 1.6E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 Gene3D G3DSA:3.40.50.1370 151 316 3.7E-144 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.6E-47 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 327 2.8E-57 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 SUPERFAMILY SSF53671 4 329 1.22E-105 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_08495 77544f0c603d1d1182c982fb2fbe8d19 330 Gene3D G3DSA:3.40.50.1370 6 326 3.7E-144 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_03195 44328dea13c0c90ac761477e806404a0 587 Gene3D G3DSA:3.40.30.40 233 397 2.4E-35 T 14-10-2018 JO41_03195 44328dea13c0c90ac761477e806404a0 587 SUPERFAMILY SSF56978 133 429 2.09E-29 T 14-10-2018 IPR036359 Thiol-activated cytolysin superfamily GO:0009405|GO:0015485 JO41_03195 44328dea13c0c90ac761477e806404a0 587 Gene3D G3DSA:3.30.1040.20 105 429 2.4E-35 T 14-10-2018 JO41_03195 44328dea13c0c90ac761477e806404a0 587 Gene3D G3DSA:3.90.840.10 141 421 2.4E-35 T 14-10-2018 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily GO:0009405|GO:0015485 JO41_03195 44328dea13c0c90ac761477e806404a0 587 Pfam PF01289 Thiol-activated cytolysin 130 429 1.2E-28 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 JO41_03195 44328dea13c0c90ac761477e806404a0 587 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 307 330 2.2E-8 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 JO41_03195 44328dea13c0c90ac761477e806404a0 587 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 407 434 2.2E-8 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 JO41_03195 44328dea13c0c90ac761477e806404a0 587 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 170 188 2.2E-8 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 JO41_03195 44328dea13c0c90ac761477e806404a0 587 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 154 170 2.2E-8 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 JO41_03195 44328dea13c0c90ac761477e806404a0 587 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 231 246 2.2E-8 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Gene3D G3DSA:1.10.1140.10 448 574 9.0E-15 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Gene3D G3DSA:2.40.30.20 2 75 6.9E-12 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Gene3D G3DSA:2.40.50.100 119 191 1.0E-154 T 14-10-2018 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Gene3D G3DSA:3.40.50.300 77 440 1.0E-154 T 14-10-2018 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 SUPERFAMILY SSF52540 171 444 5.58E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 3 577 44.556 T 14-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 72 4.1E-9 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 88 209 3.3E-35 T 14-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 220 440 2.1E-76 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_07730 2594abe67c4fdf980b17a59fe888aefa 597 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 431 440 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_00555 28a37b86fb5466915a873bfbdb93ec04 90 Gene3D G3DSA:1.20.58.110 1 86 6.9E-24 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00555 28a37b86fb5466915a873bfbdb93ec04 90 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 82 7.6E-22 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00555 28a37b86fb5466915a873bfbdb93ec04 90 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.155 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00555 28a37b86fb5466915a873bfbdb93ec04 90 Pfam PF01649 Ribosomal protein S20 2 83 4.3E-23 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00555 28a37b86fb5466915a873bfbdb93ec04 90 SUPERFAMILY SSF46992 3 86 6.15E-25 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_00555 28a37b86fb5466915a873bfbdb93ec04 90 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 84 3.0E-9 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_11630 6927685a8d9aea122a8f21da222e783e 337 SUPERFAMILY SSF46689 284 333 3.85E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_11630 6927685a8d9aea122a8f21da222e783e 337 Pfam PF12833 Helix-turn-helix domain 253 331 1.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_11630 6927685a8d9aea122a8f21da222e783e 337 SMART SM00342 247 330 9.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_11630 6927685a8d9aea122a8f21da222e783e 337 Gene3D G3DSA:1.10.10.60 226 336 1.3E-22 T 14-10-2018 JO41_03460 44846086375b4b9e0a0d840f9d66d449 51 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_03460 44846086375b4b9e0a0d840f9d66d449 51 Pfam PF00468 Ribosomal protein L34 1 44 8.8E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03460 44846086375b4b9e0a0d840f9d66d449 51 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 5.0E-11 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03460 44846086375b4b9e0a0d840f9d66d449 51 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.152 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03460 44846086375b4b9e0a0d840f9d66d449 51 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.4E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03385 9acd7168eb9ad379d4b154126a50d9c7 432 SUPERFAMILY SSF55874 170 304 1.76E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_03385 9acd7168eb9ad379d4b154126a50d9c7 432 SMART SM00100 295 413 1.1E-6 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_03385 9acd7168eb9ad379d4b154126a50d9c7 432 Pfam PF00027 Cyclic nucleotide-binding domain 318 398 1.9E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_03385 9acd7168eb9ad379d4b154126a50d9c7 432 Gene3D G3DSA:3.30.565.10 148 302 9.7E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JO41_03385 9acd7168eb9ad379d4b154126a50d9c7 432 Pfam PF13581 Histidine kinase-like ATPase domain 169 293 1.4E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JO41_03385 9acd7168eb9ad379d4b154126a50d9c7 432 SUPERFAMILY SSF51206 307 413 2.88E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_03385 9acd7168eb9ad379d4b154126a50d9c7 432 Gene3D G3DSA:2.60.120.10 303 425 1.8E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_04780 d18f92567066fdbe005e4e601a587e97 325 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 246 1.1E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JO41_04780 d18f92567066fdbe005e4e601a587e97 325 Gene3D G3DSA:2.40.50.100 67 187 1.3E-16 T 14-10-2018 JO41_04780 d18f92567066fdbe005e4e601a587e97 325 Gene3D G3DSA:2.40.420.20 244 313 5.6E-7 T 14-10-2018 JO41_04780 d18f92567066fdbe005e4e601a587e97 325 SUPERFAMILY SSF111369 54 247 6.93E-12 T 14-10-2018 JO41_05655 ca8ee4f1447108ad7938cbb9ecc54e0a 290 SUPERFAMILY SSF53187 17 275 2.34E-14 T 14-10-2018 JO41_05655 ca8ee4f1447108ad7938cbb9ecc54e0a 290 Pfam PF04389 Peptidase family M28 60 276 1.3E-12 T 14-10-2018 IPR007484 Peptidase M28 JO41_07915 93842892fa873dfd5b590931c2ec88b9 247 Pfam PF04536 TPM domain 23 146 2.7E-36 T 14-10-2018 IPR007621 TPM domain JO41_07915 93842892fa873dfd5b590931c2ec88b9 247 Gene3D G3DSA:3.10.310.50 12 158 1.8E-45 T 14-10-2018 JO41_05010 1889cf06acd6335543c4f5de0d1d8c78 380 SUPERFAMILY SSF53335 60 380 1.35E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_05010 1889cf06acd6335543c4f5de0d1d8c78 380 SUPERFAMILY SSF50249 2 58 2.23E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_05010 1889cf06acd6335543c4f5de0d1d8c78 380 Gene3D G3DSA:3.40.50.150 169 379 5.0E-39 T 14-10-2018 JO41_05010 1889cf06acd6335543c4f5de0d1d8c78 380 Gene3D G3DSA:2.40.50.140 1 66 2.4E-22 T 14-10-2018 JO41_05010 1889cf06acd6335543c4f5de0d1d8c78 380 Gene3D G3DSA:3.40.50.150 67 130 4.4E-5 T 14-10-2018 JO41_05010 1889cf06acd6335543c4f5de0d1d8c78 380 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 2.6E-12 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 JO41_10860 5ada7e7f861a3f49dcaa7327b36b28fd 381 SUPERFAMILY SSF52540 1 301 6.93E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10860 5ada7e7f861a3f49dcaa7327b36b28fd 381 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 262 1.6E-15 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JO41_06770 58bdf8169f39199f7f7ef2679236afbc 265 SUPERFAMILY SSF81345 3 256 2.22E-33 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_06770 58bdf8169f39199f7f7ef2679236afbc 265 Gene3D G3DSA:1.10.3470.10 37 263 1.6E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_06770 58bdf8169f39199f7f7ef2679236afbc 265 Pfam PF00950 ABC 3 transport family 4 258 3.1E-59 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 JO41_07725 a93765eeba4caf64b23e23f83727dfcb 439 SUPERFAMILY SSF52540 75 334 2.58E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07725 a93765eeba4caf64b23e23f83727dfcb 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 319 8.8E-44 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_07725 a93765eeba4caf64b23e23f83727dfcb 439 Gene3D G3DSA:3.40.50.12240 13 435 1.8E-109 T 14-10-2018 JO41_07725 a93765eeba4caf64b23e23f83727dfcb 439 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 432 46.232 T 14-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO41_07725 a93765eeba4caf64b23e23f83727dfcb 439 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 71 3.2E-7 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JO41_01535 c30bc2636be386ce35a7e9e42604a921 390 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 384 3.0E-125 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 JO41_01535 c30bc2636be386ce35a7e9e42604a921 390 Gene3D G3DSA:3.20.20.140 62 357 8.8E-120 T 14-10-2018 JO41_01535 c30bc2636be386ce35a7e9e42604a921 390 Gene3D G3DSA:2.30.40.10 12 384 8.8E-120 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_01535 c30bc2636be386ce35a7e9e42604a921 390 PIRSF PIRSF038994 3 388 7.4E-121 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 JO41_01535 c30bc2636be386ce35a7e9e42604a921 390 Pfam PF01979 Amidohydrolase family 58 385 9.8E-37 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO41_01535 c30bc2636be386ce35a7e9e42604a921 390 SUPERFAMILY SSF51556 62 355 2.62E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_01535 c30bc2636be386ce35a7e9e42604a921 390 SUPERFAMILY SSF51338 5 385 1.6E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 SUPERFAMILY SSF56420 2 154 3.66E-55 T 14-10-2018 IPR036821 Peptide deformylase superfamily JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 Pfam PF01327 Polypeptide deformylase 2 148 8.9E-51 T 14-10-2018 IPR023635 Peptide deformylase JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 Gene3D G3DSA:3.90.45.10 1 173 1.8E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 2 150 3.2E-53 T 14-10-2018 IPR023635 Peptide deformylase JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 Hamap MF_00163 Peptide deformylase [def]. 2 158 28.071 T 14-10-2018 IPR023635 Peptide deformylase JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 PRINTS PR01576 Peptide deformylase signature 30 59 4.2E-36 T 14-10-2018 IPR023635 Peptide deformylase JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 PRINTS PR01576 Peptide deformylase signature 97 115 4.2E-36 T 14-10-2018 IPR023635 Peptide deformylase JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 PRINTS PR01576 Peptide deformylase signature 116 145 4.2E-36 T 14-10-2018 IPR023635 Peptide deformylase JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 PRINTS PR01576 Peptide deformylase signature 85 96 4.2E-36 T 14-10-2018 IPR023635 Peptide deformylase JO41_08940 485c9e4ddf5c059b7cc5022086a396eb 173 PIRSF PIRSF004749 1 172 1.2E-55 T 14-10-2018 IPR023635 Peptide deformylase JO41_11360 70d78fc5c66ac92efe68b78ec54b2a2e 180 Pfam PF02357 Transcription termination factor nusG 2 99 9.2E-12 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO41_11360 70d78fc5c66ac92efe68b78ec54b2a2e 180 SUPERFAMILY SSF82679 1 105 2.49E-15 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO41_11360 70d78fc5c66ac92efe68b78ec54b2a2e 180 SUPERFAMILY SSF50104 116 169 4.56E-8 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JO41_11360 70d78fc5c66ac92efe68b78ec54b2a2e 180 Gene3D G3DSA:2.30.30.30 113 170 2.3E-10 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JO41_11360 70d78fc5c66ac92efe68b78ec54b2a2e 180 Gene3D G3DSA:3.30.70.940 1 104 4.7E-12 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JO41_08905 df6742bed44f1d63c7b08cc4e9124259 344 SUPERFAMILY SSF81345 7 338 1.44E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_08905 df6742bed44f1d63c7b08cc4e9124259 344 Gene3D G3DSA:1.10.3470.10 6 342 4.9E-100 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_08905 df6742bed44f1d63c7b08cc4e9124259 344 Pfam PF01032 FecCD transport family 23 338 6.3E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JO41_03275 1c27f3ba01d9c284706664d46ad3f57d 463 SUPERFAMILY SSF101478 147 429 1.57E-31 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily JO41_03275 1c27f3ba01d9c284706664d46ad3f57d 463 Gene3D G3DSA:1.10.4080.10 144 444 6.1E-30 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily JO41_03275 1c27f3ba01d9c284706664d46ad3f57d 463 Pfam PF03747 ADP-ribosylglycohydrolase 153 424 4.5E-43 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 Hamap MF_01454 GTPase Obg [obg]. 3 328 42.813 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 Pfam PF01926 50S ribosome-binding GTPase 163 281 7.2E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 Gene3D G3DSA:2.70.210.12 1 160 8.8E-49 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 185 203 4.8E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 4.8E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 164 184 4.8E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 4.8E-29 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 327 1.1E-120 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 SUPERFAMILY SSF82051 4 159 2.35E-46 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 Gene3D G3DSA:3.40.50.300 161 339 5.1E-45 T 14-10-2018 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 Pfam PF01018 GTP1/OBG 6 159 2.4E-51 T 14-10-2018 IPR006169 GTP1/OBG domain JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 ProSitePatterns PS00905 GTP1/OBG family signature. 215 228 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 JO41_09000 dcb9eff4688c02af288c233759d0c2d5 444 SUPERFAMILY SSF52540 152 329 1.99E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00105 c4826a13e24450e52d097508983149c5 308 Pfam PF00753 Metallo-beta-lactamase superfamily 22 74 6.6E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_00105 c4826a13e24450e52d097508983149c5 308 Gene3D G3DSA:3.60.15.10 3 304 1.1E-89 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_00105 c4826a13e24450e52d097508983149c5 308 SUPERFAMILY SSF56281 7 302 3.01E-76 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_00105 c4826a13e24450e52d097508983149c5 308 Pfam PF12706 Beta-lactamase superfamily domain 201 270 8.7E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_00105 c4826a13e24450e52d097508983149c5 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 6 301 2.7E-109 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 JO41_00105 c4826a13e24450e52d097508983149c5 308 SMART SM00849 20 201 0.0011 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_00105 c4826a13e24450e52d097508983149c5 308 Hamap MF_01818 Ribonuclease BN [rbn]. 3 304 35.668 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 JO41_02865 74f7f1bca9e1e0dc9561491814d7b7cf 452 Pfam PF00860 Permease family 20 412 6.3E-74 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JO41_02865 74f7f1bca9e1e0dc9561491814d7b7cf 452 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 441 2.2E-95 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JO41_02865 74f7f1bca9e1e0dc9561491814d7b7cf 452 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 359 379 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JO41_11440 a9b3f0e6598f2b1e7193657c1ff70aa3 107 SUPERFAMILY SSF81301 16 101 3.63E-15 T 14-10-2018 JO41_11440 a9b3f0e6598f2b1e7193657c1ff70aa3 107 Gene3D G3DSA:3.30.460.10 6 103 1.3E-19 T 14-10-2018 JO41_11440 a9b3f0e6598f2b1e7193657c1ff70aa3 107 Pfam PF01909 Nucleotidyltransferase domain 24 101 6.9E-13 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 SUPERFAMILY SSF64182 353 580 3.66E-42 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 Gene3D G3DSA:3.10.310.30 466 582 7.9E-20 T 14-10-2018 JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 Pfam PF02272 DHHA1 domain 455 577 3.1E-12 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 Pfam PF01368 DHH family 78 174 2.3E-10 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 SUPERFAMILY SSF64182 53 206 1.83E-43 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 Gene3D G3DSA:3.90.1640.30 302 457 1.7E-26 T 14-10-2018 JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 Gene3D G3DSA:3.90.1640.30 53 236 8.4E-47 T 14-10-2018 JO41_06270 5248d3c7951221ba170e94418fe1ab16 710 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 703 3.7E-173 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 JO41_12770 8bfa1b269557bb684bb74749999860bc 434 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 29 428 3.5E-36 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 JO41_12770 8bfa1b269557bb684bb74749999860bc 434 Pfam PF17288 Terminase RNAseH like domain 331 426 4.8E-6 T 14-10-2018 IPR035413 Phage terminase large subunit, C-terminal JO41_12770 8bfa1b269557bb684bb74749999860bc 434 Gene3D G3DSA:3.40.50.300 13 234 1.5E-44 T 14-10-2018 JO41_12770 8bfa1b269557bb684bb74749999860bc 434 Pfam PF04466 Phage terminase large subunit 30 232 1.0E-32 T 14-10-2018 IPR035412 Phage terminase large subunit, N-terminal JO41_12770 8bfa1b269557bb684bb74749999860bc 434 Gene3D G3DSA:3.30.420.280 239 433 1.5E-41 T 14-10-2018 JO41_07685 05b1c57773b699b7698c9b10e12ebaf9 210 PRINTS PR01100 Shikimate kinase family signature 1 16 4.5E-5 T 14-10-2018 JO41_07685 05b1c57773b699b7698c9b10e12ebaf9 210 PRINTS PR01100 Shikimate kinase family signature 25 38 4.5E-5 T 14-10-2018 JO41_07685 05b1c57773b699b7698c9b10e12ebaf9 210 SUPERFAMILY SSF52540 2 208 2.61E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07685 05b1c57773b699b7698c9b10e12ebaf9 210 Pfam PF01202 Shikimate kinase 9 69 4.5E-11 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JO41_09320 dfb6978e0c5e9d936c396c60af72a82a 150 PIRSF PIRSF005384 1 148 9.9E-55 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_09320 dfb6978e0c5e9d936c396c60af72a82a 150 SUPERFAMILY SSF89623 1 148 1.31E-50 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_09320 dfb6978e0c5e9d936c396c60af72a82a 150 Gene3D G3DSA:3.40.1400.10 1 150 5.7E-50 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_09320 dfb6978e0c5e9d936c396c60af72a82a 150 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 4.5E-47 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_09320 dfb6978e0c5e9d936c396c60af72a82a 150 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 145 1.1E-45 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 JO41_09320 dfb6978e0c5e9d936c396c60af72a82a 150 Pfam PF02502 Ribose/Galactose Isomerase 4 141 1.1E-47 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JO41_00260 4bfbfcf678956b7135206ee7776bf6e4 52 Gene3D G3DSA:2.20.28.10 1 52 1.1E-26 T 14-10-2018 JO41_00260 4bfbfcf678956b7135206ee7776bf6e4 52 PRINTS PR00163 Rubredoxin signature 33 49 7.0E-11 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 JO41_00260 4bfbfcf678956b7135206ee7776bf6e4 52 PRINTS PR00163 Rubredoxin signature 3 19 7.0E-11 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 JO41_00260 4bfbfcf678956b7135206ee7776bf6e4 52 Pfam PF00301 Rubredoxin 3 49 4.0E-24 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 JO41_00260 4bfbfcf678956b7135206ee7776bf6e4 52 PIRSF PIRSF000071 1 52 7.8E-27 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 JO41_00260 4bfbfcf678956b7135206ee7776bf6e4 52 SUPERFAMILY SSF57802 1 51 3.53E-22 T 14-10-2018 JO41_00260 4bfbfcf678956b7135206ee7776bf6e4 52 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 JO41_09180 d818ca49cff690fef47bc5ae91764da7 334 Gene3D G3DSA:3.40.190.10 118 263 1.1E-25 T 14-10-2018 JO41_09180 d818ca49cff690fef47bc5ae91764da7 334 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 326 5.1E-54 T 14-10-2018 JO41_09180 d818ca49cff690fef47bc5ae91764da7 334 Gene3D G3DSA:3.40.190.10 34 288 1.1E-25 T 14-10-2018 JO41_09180 d818ca49cff690fef47bc5ae91764da7 334 SUPERFAMILY SSF53850 29 329 1.58E-33 T 14-10-2018 JO41_01920 2b25ef248b7a007b4aa362d131c5d6e4 215 SUPERFAMILY SSF88946 19 119 1.29E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JO41_01920 2b25ef248b7a007b4aa362d131c5d6e4 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 191 8.9E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JO41_01920 2b25ef248b7a007b4aa362d131c5d6e4 215 SUPERFAMILY SSF88659 123 192 9.35E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JO41_01920 2b25ef248b7a007b4aa362d131c5d6e4 215 Pfam PF04542 Sigma-70 region 2 40 107 1.5E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JO41_01920 2b25ef248b7a007b4aa362d131c5d6e4 215 Pfam PF08281 Sigma-70, region 4 136 186 4.2E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JO41_01920 2b25ef248b7a007b4aa362d131c5d6e4 215 Gene3D G3DSA:1.10.10.10 134 197 2.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_01920 2b25ef248b7a007b4aa362d131c5d6e4 215 Gene3D G3DSA:1.10.1740.10 14 131 3.1E-27 T 14-10-2018 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 Gene3D G3DSA:3.40.50.720 215 438 1.4E-61 T 14-10-2018 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 SUPERFAMILY SSF52413 321 428 9.16E-24 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 Gene3D G3DSA:3.40.50.720 1 212 5.9E-62 T 14-10-2018 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 PIRSF PIRSF500136 6 439 1.4E-145 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 SMART SM00984 333 429 3.8E-22 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 SUPERFAMILY SSF51735 18 206 5.38E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 18 425 4.1E-123 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 334 428 8.9E-19 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 SUPERFAMILY SSF48179 215 308 2.89E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 216 306 4.8E-27 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 18 195 1.7E-38 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JO41_03105 4b89af70bf727ef63bee36b9780423d5 440 PIRSF PIRSF000124 17 438 2.1E-60 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Gene3D G3DSA:3.40.1440.10 7 105 5.4E-32 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 SUPERFAMILY SSF47781 586 686 5.56E-14 T 14-10-2018 IPR010994 RuvA domain 2-like JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Gene3D G3DSA:1.10.150.20 625 682 3.8E-9 T 14-10-2018 JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Pfam PF14520 Helix-hairpin-helix domain 635 685 6.4E-7 T 14-10-2018 JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 SMART SM00465 21 101 1.8E-21 T 14-10-2018 IPR000305 GIY-YIG endonuclease JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Pfam PF01541 GIY-YIG catalytic domain 22 96 2.0E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 17 341 3.6E-106 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 SUPERFAMILY SSF82771 21 103 4.71E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Pfam PF02151 UvrB/uvrC motif 203 237 3.1E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 467 616 2.6E-49 T 14-10-2018 IPR001162 UvrC family homology region JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Gene3D G3DSA:3.30.420.340 461 624 1.1E-52 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 SUPERFAMILY SSF46600 189 238 1.7E-10 T 14-10-2018 IPR036876 UVR domain superfamily JO41_01675 1f1eea6a5232be9e21434bae9c48cf48 692 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 682 26.76 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JO41_07950 b31c07fa53bbde7a383eb48d73b9f0bb 480 Pfam PF02386 Cation transport protein 39 474 2.3E-58 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 JO41_07950 b31c07fa53bbde7a383eb48d73b9f0bb 480 PIRSF PIRSF006247 1 480 3.5E-169 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JO41_09450 1ff84b9d3c89a0f9c926fa39686ed6ba 259 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site JO41_09450 1ff84b9d3c89a0f9c926fa39686ed6ba 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 217 3.1E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 SMART SM00304 316 370 9.3E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 Pfam PF00672 HAMP domain 317 364 1.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 493 628 2.9E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 2.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 2.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 588 617 2.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 2.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 Pfam PF02743 Cache domain 42 278 1.0E-22 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 SUPERFAMILY SSF103190 63 192 4.51E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 Gene3D G3DSA:1.10.287.950 439 659 1.7E-42 T 14-10-2018 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 SUPERFAMILY SSF58104 338 658 7.19E-48 T 14-10-2018 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 SMART SM00283 413 660 1.0E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 Gene3D G3DSA:1.10.287.950 315 428 3.1E-10 T 14-10-2018 JO41_11055 fbd33e70c6de3f50a0cacdb81db3e830 704 Gene3D G3DSA:3.30.450.20 151 296 6.9E-19 T 14-10-2018 JO41_07645 1d2d0d94562c7c421bcb0d45852cf4d8 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 8 149 3.7E-61 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JO41_07645 1d2d0d94562c7c421bcb0d45852cf4d8 154 Gene3D G3DSA:2.40.280.10 2 129 3.3E-50 T 14-10-2018 IPR023620 Small protein B JO41_07645 1d2d0d94562c7c421bcb0d45852cf4d8 154 Pfam PF01668 SmpB protein 9 149 1.4E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JO41_07645 1d2d0d94562c7c421bcb0d45852cf4d8 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 68.086 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JO41_07645 1d2d0d94562c7c421bcb0d45852cf4d8 154 SUPERFAMILY SSF74982 3 132 2.09E-50 T 14-10-2018 IPR023620 Small protein B JO41_07645 1d2d0d94562c7c421bcb0d45852cf4d8 154 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site JO41_07645 1d2d0d94562c7c421bcb0d45852cf4d8 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 3.0E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 SUPERFAMILY SSF51261 175 386 5.18E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 SMART SM00257 203 246 4.8E-10 T 14-10-2018 IPR018392 LysM domain JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 SMART SM00257 152 197 3.8E-10 T 14-10-2018 IPR018392 LysM domain JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 Gene3D G3DSA:2.70.70.10 248 387 1.6E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 Gene3D G3DSA:3.10.350.10 146 202 4.3E-12 T 14-10-2018 IPR036779 LysM domain superfamily JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 Gene3D G3DSA:3.10.350.10 203 247 4.8E-13 T 14-10-2018 IPR036779 LysM domain superfamily JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 Pfam PF01551 Peptidase family M23 288 382 3.8E-32 T 14-10-2018 IPR016047 Peptidase M23 JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 Pfam PF01476 LysM domain 153 197 5.5E-11 T 14-10-2018 IPR018392 LysM domain JO41_05835 58a50fcded3d5443b7117ea2446304ee 387 Pfam PF01476 LysM domain 204 246 1.5E-11 T 14-10-2018 IPR018392 LysM domain JO41_04665 dcc941abe1a68c359126303a0889d73e 417 Gene3D G3DSA:3.40.50.300 3 85 1.5E-5 T 14-10-2018 JO41_04665 dcc941abe1a68c359126303a0889d73e 417 Pfam PF13173 AAA domain 19 151 1.8E-39 T 14-10-2018 JO41_04665 dcc941abe1a68c359126303a0889d73e 417 SUPERFAMILY SSF52540 4 201 1.95E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04665 dcc941abe1a68c359126303a0889d73e 417 Pfam PF13635 Domain of unknown function (DUF4143) 197 356 4.2E-10 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 JO41_11785 ffead7e329cb8c49874262ce44d70d77 159 SUPERFAMILY SSF50249 4 159 6.51E-44 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_11785 ffead7e329cb8c49874262ce44d70d77 159 Hamap MF_00984 Single-stranded DNA-binding protein. 4 109 32.365 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO41_11785 ffead7e329cb8c49874262ce44d70d77 159 Pfam PF00436 Single-strand binding protein family 4 105 3.3E-32 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JO41_11785 ffead7e329cb8c49874262ce44d70d77 159 PIRSF PIRSF002070 1 153 5.5E-34 T 14-10-2018 JO41_11785 ffead7e329cb8c49874262ce44d70d77 159 Gene3D G3DSA:2.40.50.140 2 139 1.2E-39 T 14-10-2018 JO41_11785 ffead7e329cb8c49874262ce44d70d77 159 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 159 1.0E-44 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JO41_06320 79c03ddea07554e2801382cbfc08d9f5 359 Gene3D G3DSA:3.40.50.2300 37 343 2.1E-82 T 14-10-2018 JO41_06320 79c03ddea07554e2801382cbfc08d9f5 359 SUPERFAMILY SSF53822 34 359 7.07E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO41_06320 79c03ddea07554e2801382cbfc08d9f5 359 Gene3D G3DSA:3.40.50.2300 137 359 2.1E-82 T 14-10-2018 JO41_06320 79c03ddea07554e2801382cbfc08d9f5 359 Pfam PF13407 Periplasmic binding protein domain 37 303 4.7E-43 T 14-10-2018 IPR025997 Periplasmic binding protein JO41_11365 77bd30581585304c169203e75912f272 691 Gene3D G3DSA:1.10.287.950 310 423 5.4E-7 T 14-10-2018 JO41_11365 77bd30581585304c169203e75912f272 691 SMART SM00283 401 648 2.6E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_11365 77bd30581585304c169203e75912f272 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 621 4.0E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_11365 77bd30581585304c169203e75912f272 691 SUPERFAMILY SSF58104 427 642 6.41E-39 T 14-10-2018 JO41_11365 77bd30581585304c169203e75912f272 691 SMART SM00304 307 358 7.9E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_11365 77bd30581585304c169203e75912f272 691 Gene3D G3DSA:1.10.287.950 426 645 1.4E-38 T 14-10-2018 JO41_08090 7994ee8a73e8c8a0c26edc627580c695 464 SUPERFAMILY SSF56349 164 447 3.53E-38 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO41_08090 7994ee8a73e8c8a0c26edc627580c695 464 Gene3D G3DSA:1.10.443.10 238 455 1.6E-25 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO41_08090 7994ee8a73e8c8a0c26edc627580c695 464 Pfam PF00589 Phage integrase family 262 444 2.2E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO41_01135 b520ac87e7fa00d14d5f81156b01e581 238 Pfam PF00849 RNA pseudouridylate synthase 23 166 7.5E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_01135 b520ac87e7fa00d14d5f81156b01e581 238 SUPERFAMILY SSF55120 10 228 1.57E-54 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_01135 b520ac87e7fa00d14d5f81156b01e581 238 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 58 72 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_01135 b520ac87e7fa00d14d5f81156b01e581 238 Gene3D G3DSA:3.30.2350.10 14 231 9.3E-55 T 14-10-2018 JO41_11500 75080813cdfc44d5471fdd0388a9559c 345 Gene3D G3DSA:3.20.20.70 26 312 2.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_11500 75080813cdfc44d5471fdd0388a9559c 345 TIGRFAM TIGR00238 TIGR00238: KamA family protein 10 304 2.9E-67 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase JO41_11500 75080813cdfc44d5471fdd0388a9559c 345 PIRSF PIRSF004911 6 336 3.8E-101 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase JO41_11500 75080813cdfc44d5471fdd0388a9559c 345 Pfam PF13353 4Fe-4S single cluster domain 90 164 2.9E-5 T 14-10-2018 JO41_11500 75080813cdfc44d5471fdd0388a9559c 345 SUPERFAMILY SSF102114 83 319 1.83E-26 T 14-10-2018 JO41_08770 0911b51320c0a29a5633aad4c173533c 350 SUPERFAMILY SSF102114 107 301 9.42E-13 T 14-10-2018 JO41_08770 0911b51320c0a29a5633aad4c173533c 350 PIRSF PIRSF006004 10 349 2.0E-107 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 JO41_08770 0911b51320c0a29a5633aad4c173533c 350 Pfam PF04055 Radical SAM superfamily 113 270 2.5E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_08770 0911b51320c0a29a5633aad4c173533c 350 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 11 347 59.074 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JO41_08770 0911b51320c0a29a5633aad4c173533c 350 Gene3D G3DSA:1.10.150.530 18 67 2.2E-6 T 14-10-2018 JO41_08770 0911b51320c0a29a5633aad4c173533c 350 Gene3D G3DSA:3.20.20.70 72 332 2.2E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_08770 0911b51320c0a29a5633aad4c173533c 350 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 31 345 3.6E-94 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 Gene3D G3DSA:3.40.50.300 701 982 3.9E-102 T 14-10-2018 JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 Pfam PF09397 Ftsk gamma domain 999 1058 4.9E-28 T 14-10-2018 IPR018541 FtsK gamma domain JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 Gene3D G3DSA:3.30.980.40 597 700 4.9E-31 T 14-10-2018 JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 Pfam PF01580 FtsK/SpoIIIE family 845 895 2.9E-10 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 Pfam PF01580 FtsK/SpoIIIE family 714 839 3.1E-41 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 SMART SM00382 739 918 8.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 Gene3D G3DSA:1.10.10.10 993 1058 5.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 SUPERFAMILY SSF46785 998 1059 1.02E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 SUPERFAMILY SSF52540 678 966 1.59E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04525 a1775b1a973f1764ab059088f65bb253 1061 SMART SM00843 997 1061 9.9E-34 T 14-10-2018 IPR018541 FtsK gamma domain JO41_11935 96ed8264ce1d6841b566691d11bda540 366 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 48 246 5.2E-31 T 14-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 JO41_11935 96ed8264ce1d6841b566691d11bda540 366 Gene3D G3DSA:3.30.590.10 8 250 1.4E-43 T 14-10-2018 JO41_11935 96ed8264ce1d6841b566691d11bda540 366 SUPERFAMILY SSF55931 6 261 5.33E-50 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JO41_09695 c35eba6d82b2e869bdb7068f0a879927 405 Pfam PF12704 MacB-like periplasmic core domain 47 243 1.1E-8 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_09695 c35eba6d82b2e869bdb7068f0a879927 405 Pfam PF02687 FtsX-like permease family 302 387 3.6E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 SMART SM00248 48 77 380.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 SMART SM00248 179 208 0.0047 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 SMART SM00248 212 242 1600.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 SMART SM00248 78 107 0.43 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 SMART SM00248 141 170 0.44 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 Gene3D G3DSA:1.25.40.20 20 261 2.4E-31 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 SUPERFAMILY SSF48403 22 235 4.07E-31 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO41_12455 6c58ce98360c5c359cbf184be59852d6 355 Pfam PF12796 Ankyrin repeats (3 copies) 148 232 2.3E-8 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 Gene3D G3DSA:3.40.50.1370 169 364 1.8E-201 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 PRINTS PR00101 Aspartate carbamoyltransferase signature 165 182 3.0E-7 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 PRINTS PR00101 Aspartate carbamoyltransferase signature 96 105 3.0E-7 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 PRINTS PR00101 Aspartate carbamoyltransferase signature 58 80 3.0E-7 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 Gene3D G3DSA:3.40.50.1370 9 391 1.8E-201 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 6 394 2.3E-238 T 14-10-2018 IPR017702 Putative carbamoyltransferase YgeW JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 188 375 5.5E-43 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 28 177 1.1E-24 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 SUPERFAMILY SSF53671 19 375 2.23E-56 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 324 333 1.2E-7 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 342 365 1.2E-7 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_06775 7b4ff7e953ae5a16d840949f4127d997 399 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 68 87 1.2E-7 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 SUPERFAMILY SSF47364 4 76 6.93E-10 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 20 287 7.4E-87 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 Pfam PF00448 SRP54-type protein, GTPase domain 89 288 2.6E-66 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 263 276 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 Pfam PF02881 SRP54-type protein, helical bundle domain 6 72 3.5E-6 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 Gene3D G3DSA:1.20.120.140 11 286 5.8E-80 T 14-10-2018 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 SUPERFAMILY SSF52540 82 291 8.51E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 SMART SM00382 87 266 4.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 Gene3D G3DSA:3.40.50.300 88 278 5.8E-80 T 14-10-2018 JO41_12525 1233fdec54a0c75d8a1747c547da2f91 293 SMART SM00962 88 290 1.2E-83 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JO41_07395 f1e80c4e8490330d30624e3ad3e59255 197 SMART SM00028 141 174 3.0E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_07395 f1e80c4e8490330d30624e3ad3e59255 197 SMART SM00028 73 106 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_07395 f1e80c4e8490330d30624e3ad3e59255 197 Pfam PF00515 Tetratricopeptide repeat 141 174 6.7E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO41_07395 f1e80c4e8490330d30624e3ad3e59255 197 SUPERFAMILY SSF48452 29 177 1.14E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_07395 f1e80c4e8490330d30624e3ad3e59255 197 Gene3D G3DSA:1.25.40.10 19 197 3.5E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12735 cba4dc3ee0ed8af2e88859f752c5a3e6 252 SUPERFAMILY SSF52540 81 222 5.62E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12735 cba4dc3ee0ed8af2e88859f752c5a3e6 252 Pfam PF01695 IstB-like ATP binding protein 87 224 1.5E-6 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 JO41_12735 cba4dc3ee0ed8af2e88859f752c5a3e6 252 Gene3D G3DSA:3.40.50.300 74 250 1.2E-21 T 14-10-2018 JO41_05140 999146fa10a03d294fcf4fbdbdf8c2cc 345 SUPERFAMILY SSF69917 48 339 5.49E-12 T 14-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 JO41_05140 999146fa10a03d294fcf4fbdbdf8c2cc 345 Pfam PF01278 Omptin family 45 342 1.1E-19 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JO41_05140 999146fa10a03d294fcf4fbdbdf8c2cc 345 Gene3D G3DSA:2.40.128.90 36 344 1.4E-26 T 14-10-2018 JO41_12055 b249cf81fce5ff418108cc62883cedb5 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 JO41_12055 b249cf81fce5ff418108cc62883cedb5 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 255 6.2E-86 T 14-10-2018 JO41_12055 b249cf81fce5ff418108cc62883cedb5 258 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 192 207 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 JO41_12055 b249cf81fce5ff418108cc62883cedb5 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 4.7E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JO41_12055 b249cf81fce5ff418108cc62883cedb5 258 Gene3D G3DSA:3.60.10.10 2 257 1.4E-84 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO41_12055 b249cf81fce5ff418108cc62883cedb5 258 SUPERFAMILY SSF56219 4 256 6.67E-72 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO41_12055 b249cf81fce5ff418108cc62883cedb5 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 256 1.1E-93 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JO41_05995 2dfa46682b7743a37f66c75eb0384dd6 300 Gene3D G3DSA:3.20.20.140 1 297 6.2E-43 T 14-10-2018 JO41_05995 2dfa46682b7743a37f66c75eb0384dd6 300 Pfam PF00962 Adenosine/AMP deaminase 143 275 1.4E-25 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 JO41_05995 2dfa46682b7743a37f66c75eb0384dd6 300 SUPERFAMILY SSF51556 5 277 1.25E-41 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_10200 da73b3ccf459ac76a82ac3d101a9346f 373 SUPERFAMILY SSF48452 21 155 1.63E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10200 da73b3ccf459ac76a82ac3d101a9346f 373 Gene3D G3DSA:1.25.40.10 93 236 3.5E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10200 da73b3ccf459ac76a82ac3d101a9346f 373 Pfam PF13174 Tetratricopeptide repeat 127 158 4.8E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_10200 da73b3ccf459ac76a82ac3d101a9346f 373 Pfam PF13432 Tetratricopeptide repeat 20 84 2.3E-5 T 14-10-2018 JO41_10200 da73b3ccf459ac76a82ac3d101a9346f 373 Gene3D G3DSA:1.25.40.10 23 92 6.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00330 cae05c7071937eadd4211ee3b7c1960a 250 Gene3D G3DSA:1.25.10.110 109 181 1.7E-8 T 14-10-2018 JO41_00330 cae05c7071937eadd4211ee3b7c1960a 250 SUPERFAMILY SSF48371 110 243 1.23E-10 T 14-10-2018 IPR016024 Armadillo-type fold JO41_00330 cae05c7071937eadd4211ee3b7c1960a 250 Pfam PF13646 HEAT repeats 114 165 3.1E-9 T 14-10-2018 JO41_01620 7d55a9bb808fe7e1d00f9b2ae021c719 295 Hamap MF_00729 Fructose-bisphosphate aldolase class 1 [fda]. 2 294 51.511 T 14-10-2018 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 JO41_01620 7d55a9bb808fe7e1d00f9b2ae021c719 295 Pfam PF00274 Fructose-bisphosphate aldolase class-I 10 195 1.1E-10 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_01620 7d55a9bb808fe7e1d00f9b2ae021c719 295 SUPERFAMILY SSF51569 4 294 1.26E-96 T 14-10-2018 JO41_01620 7d55a9bb808fe7e1d00f9b2ae021c719 295 Gene3D G3DSA:3.20.20.70 1 295 2.7E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 SMART SM00883 2 87 7.9E-40 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 PRINTS PR00297 10kDa chaperonin signature 74 87 6.9E-23 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 PRINTS PR00297 10kDa chaperonin signature 25 46 6.9E-23 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 PRINTS PR00297 10kDa chaperonin signature 53 65 6.9E-23 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 PRINTS PR00297 10kDa chaperonin signature 3 18 6.9E-23 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 Pfam PF00166 Chaperonin 10 Kd subunit 2 87 2.2E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 Gene3D G3DSA:2.30.33.40 1 88 2.1E-29 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 SUPERFAMILY SSF50129 1 88 8.48E-28 T 14-10-2018 IPR011032 GroES-like superfamily JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 JO41_03680 a03e13225663f1531e5be87cebe0f1fe 88 Hamap MF_00580 10 kDa chaperonin [groS]. 2 88 21.432 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 SUPERFAMILY SSF55031 187 298 7.59E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 Gene3D G3DSA:3.40.630.10 20 378 8.8E-125 T 14-10-2018 JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 SUPERFAMILY SSF53187 7 394 2.13E-75 T 14-10-2018 JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 Gene3D G3DSA:3.30.70.360 185 299 8.8E-125 T 14-10-2018 JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 Pfam PF07687 Peptidase dimerisation domain 188 284 1.2E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 Pfam PF01546 Peptidase family M20/M25/M40 77 386 2.8E-28 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 380 3.6E-101 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 JO41_11415 9803ac5f70924e9f37bbcfb59d78528d 397 PIRSF PIRSF005962 4 396 1.8E-120 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 JO41_01980 f3367d387c3e9884e2ce9ea2d7a489ce 397 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 36 205 1.3E-17 T 14-10-2018 IPR015304 ZinT domain GO:0008270 JO41_01980 f3367d387c3e9884e2ce9ea2d7a489ce 397 Gene3D G3DSA:2.40.128.20 23 207 1.8E-23 T 14-10-2018 IPR012674 Calycin JO41_01980 f3367d387c3e9884e2ce9ea2d7a489ce 397 SUPERFAMILY SSF50814 34 206 8.3E-29 T 14-10-2018 IPR012674 Calycin JO41_09950 40d56f581ed57cbe051cc41023085195 161 Gene3D G3DSA:1.20.1260.10 1 161 1.6E-47 T 14-10-2018 IPR012347 Ferritin-like JO41_09950 40d56f581ed57cbe051cc41023085195 161 Pfam PF00210 Ferritin-like domain 7 142 2.9E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JO41_09950 40d56f581ed57cbe051cc41023085195 161 SUPERFAMILY SSF47240 2 159 1.08E-52 T 14-10-2018 IPR009078 Ferritin-like superfamily JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 SMART SM00418 39 117 6.2E-26 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 5.2E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 5.2E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 5.2E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 5.2E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 62 80 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 SUPERFAMILY SSF46785 25 118 8.29E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 Gene3D G3DSA:1.10.10.10 9 122 6.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_05005 047d18cfb41a8763f59c8fe28f8f0c00 123 Pfam PF01022 Bacterial regulatory protein, arsR family 46 89 9.7E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO41_07105 b5820a25eb7b2bbdfae3db8cf640a896 139 SUPERFAMILY SSF88723 1 123 2.55E-19 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_07105 b5820a25eb7b2bbdfae3db8cf640a896 139 Pfam PF13470 PIN domain 4 118 3.4E-13 T 14-10-2018 IPR002716 PIN domain JO41_07105 b5820a25eb7b2bbdfae3db8cf640a896 139 Gene3D G3DSA:3.40.50.1010 4 135 2.0E-9 T 14-10-2018 JO41_05410 20215596564f69f6d7f5936410d53736 380 Gene3D G3DSA:3.20.20.70 1 293 4.5E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_05410 20215596564f69f6d7f5936410d53736 380 Gene3D G3DSA:3.90.1210.10 314 379 1.5E-9 T 14-10-2018 JO41_05410 20215596564f69f6d7f5936410d53736 380 SUPERFAMILY SSF51569 5 269 1.83E-63 T 14-10-2018 JO41_05410 20215596564f69f6d7f5936410d53736 380 SUPERFAMILY SSF51269 308 374 4.51E-7 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 JO41_05410 20215596564f69f6d7f5936410d53736 380 Pfam PF03102 NeuB family 38 268 4.0E-55 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 JO41_12835 5a19bc08eff5b422a7cb58acc31260d6 184 Pfam PF06810 Phage minor structural protein GP20 15 143 5.9E-14 T 14-10-2018 IPR009636 Capsid assembly scaffolding protein GO:0019069 JO41_08210 5a19bc08eff5b422a7cb58acc31260d6 184 Pfam PF06810 Phage minor structural protein GP20 15 143 5.9E-14 T 14-10-2018 IPR009636 Capsid assembly scaffolding protein GO:0019069 JO41_04720 d79f2f44667e8847ea142050e6058b3c 623 SUPERFAMILY SSF103473 3 391 8.63E-32 T 14-10-2018 IPR036259 MFS transporter superfamily JO41_04720 d79f2f44667e8847ea142050e6058b3c 623 Gene3D G3DSA:1.20.1250.20 4 199 2.8E-14 T 14-10-2018 JO41_04720 d79f2f44667e8847ea142050e6058b3c 623 Gene3D G3DSA:1.20.1250.20 221 399 5.6E-8 T 14-10-2018 JO41_04720 d79f2f44667e8847ea142050e6058b3c 623 Pfam PF13347 MFS/sugar transport protein 10 394 4.5E-63 T 14-10-2018 JO41_00860 9b8dca29fd11d4779f58d80070dfe0e4 541 Gene3D G3DSA:1.10.3720.10 295 540 1.9E-30 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00860 9b8dca29fd11d4779f58d80070dfe0e4 541 Gene3D G3DSA:1.10.3720.10 17 277 3.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00860 9b8dca29fd11d4779f58d80070dfe0e4 541 SUPERFAMILY SSF161098 24 271 9.35E-43 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00860 9b8dca29fd11d4779f58d80070dfe0e4 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 365 527 1.2E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_00860 9b8dca29fd11d4779f58d80070dfe0e4 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 274 5.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_00860 9b8dca29fd11d4779f58d80070dfe0e4 541 SUPERFAMILY SSF161098 305 531 3.27E-35 T 14-10-2018 IPR035906 MetI-like superfamily JO41_05555 156ef35333910064eb581d917c5e8045 241 SMART SM00332 7 235 0.0024 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_05555 156ef35333910064eb581d917c5e8045 241 Pfam PF13672 Protein phosphatase 2C 14 214 1.2E-34 T 14-10-2018 JO41_05555 156ef35333910064eb581d917c5e8045 241 SUPERFAMILY SSF81606 21 235 6.28E-17 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_05555 156ef35333910064eb581d917c5e8045 241 Gene3D G3DSA:3.60.40.10 16 236 8.7E-13 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_04540 5a13bddddc654bdeaeb9bb2b372bbda2 147 Pfam PF01029 NusB family 8 135 6.4E-34 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JO41_04540 5a13bddddc654bdeaeb9bb2b372bbda2 147 SUPERFAMILY SSF48013 5 133 1.18E-37 T 14-10-2018 IPR035926 NusB-like superfamily JO41_04540 5a13bddddc654bdeaeb9bb2b372bbda2 147 Gene3D G3DSA:1.10.940.10 3 147 1.4E-39 T 14-10-2018 IPR035926 NusB-like superfamily JO41_04540 5a13bddddc654bdeaeb9bb2b372bbda2 147 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 136 1.0E-37 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 JO41_04540 5a13bddddc654bdeaeb9bb2b372bbda2 147 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 3 138 20.445 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 JO41_09980 6b759569ebb9a4576ccfe74e23fd79da 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 168 173 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site JO41_09980 6b759569ebb9a4576ccfe74e23fd79da 222 Gene3D G3DSA:3.40.140.10 96 219 2.7E-39 T 14-10-2018 JO41_09980 6b759569ebb9a4576ccfe74e23fd79da 222 Pfam PF04002 RadC-like JAB domain 100 218 1.3E-40 T 14-10-2018 IPR025657 RadC-like JAB domain JO41_09980 6b759569ebb9a4576ccfe74e23fd79da 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 218 3.9E-57 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 JO41_00875 734b40f54c2f2e2a3f2d3e6e6e13188c 395 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 16 393 1.7E-96 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 JO41_00875 734b40f54c2f2e2a3f2d3e6e6e13188c 395 Gene3D G3DSA:3.30.420.40 21 391 1.4E-115 T 14-10-2018 JO41_00875 734b40f54c2f2e2a3f2d3e6e6e13188c 395 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 14 395 33.969 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 JO41_00875 734b40f54c2f2e2a3f2d3e6e6e13188c 395 Gene3D G3DSA:3.30.420.40 165 356 1.4E-115 T 14-10-2018 JO41_00875 734b40f54c2f2e2a3f2d3e6e6e13188c 395 SUPERFAMILY SSF53067 17 368 7.78E-14 T 14-10-2018 JO41_04925 9890aa121fc831b4d83231e7d65c91ec 189 SUPERFAMILY SSF46689 2 72 3.39E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_04925 9890aa121fc831b4d83231e7d65c91ec 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_04925 9890aa121fc831b4d83231e7d65c91ec 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_04925 9890aa121fc831b4d83231e7d65c91ec 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 4.9E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_04925 9890aa121fc831b4d83231e7d65c91ec 189 Gene3D G3DSA:1.10.357.10 2 186 5.2E-23 T 14-10-2018 JO41_05360 7b85fa4a39eef3805351eb74d29f9887 95 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 65 1.1E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_05360 7b85fa4a39eef3805351eb74d29f9887 95 Pfam PF04221 RelB antitoxin 6 54 5.9E-8 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_06285 c6a334bc9004b4c08afbcd9fff8ad23d 228 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-39 T 14-10-2018 JO41_06285 c6a334bc9004b4c08afbcd9fff8ad23d 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 6.6E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JO41_06285 c6a334bc9004b4c08afbcd9fff8ad23d 228 SMART SM00448 2 112 3.1E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_06285 c6a334bc9004b4c08afbcd9fff8ad23d 228 Pfam PF00072 Response regulator receiver domain 4 112 6.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_06285 c6a334bc9004b4c08afbcd9fff8ad23d 228 Gene3D G3DSA:1.10.10.10 124 226 1.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_06285 c6a334bc9004b4c08afbcd9fff8ad23d 228 SMART SM00862 145 220 6.0E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JO41_06285 c6a334bc9004b4c08afbcd9fff8ad23d 228 SUPERFAMILY SSF52172 1 177 1.85E-43 T 14-10-2018 IPR011006 CheY-like superfamily JO41_02580 5927c792aa3d7a918461a1d8a623a47d 113 SUPERFAMILY SSF50118 2 109 5.89E-23 T 14-10-2018 JO41_02580 5927c792aa3d7a918461a1d8a623a47d 113 PIRSF PIRSF033490 1 111 1.8E-22 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JO41_02580 5927c792aa3d7a918461a1d8a623a47d 113 Gene3D G3DSA:2.30.30.110 1 110 7.3E-26 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JO41_02580 5927c792aa3d7a918461a1d8a623a47d 113 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 109 2.1E-18 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JO41_11100 df5516e7734ff674e9b9210f01b68523 207 Pfam PF01351 Ribonuclease HII 3 194 8.5E-30 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain JO41_11100 df5516e7734ff674e9b9210f01b68523 207 Gene3D G3DSA:3.30.420.10 1 206 5.5E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_11100 df5516e7734ff674e9b9210f01b68523 207 SUPERFAMILY SSF53098 2 197 6.83E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_10355 dbc4c833e1073b5a40e70f5b05ab9d95 325 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 305 2.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_10355 dbc4c833e1073b5a40e70f5b05ab9d95 325 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 321 2.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_10355 dbc4c833e1073b5a40e70f5b05ab9d95 325 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 275 317 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JO41_10355 dbc4c833e1073b5a40e70f5b05ab9d95 325 SUPERFAMILY SSF46689 274 323 7.17E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_10355 dbc4c833e1073b5a40e70f5b05ab9d95 325 Pfam PF12833 Helix-turn-helix domain 247 323 8.4E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_10355 dbc4c833e1073b5a40e70f5b05ab9d95 325 Gene3D G3DSA:1.10.10.60 220 324 3.5E-24 T 14-10-2018 JO41_10355 dbc4c833e1073b5a40e70f5b05ab9d95 325 SMART SM00342 238 321 8.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_02395 892fa6f0dd75817f341b45cc51d9cc3e 243 Gene3D G3DSA:3.40.50.1360 27 238 2.4E-70 T 14-10-2018 JO41_02395 892fa6f0dd75817f341b45cc51d9cc3e 243 SUPERFAMILY SSF100950 7 194 1.77E-35 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_02395 892fa6f0dd75817f341b45cc51d9cc3e 243 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 63 238 1.4E-56 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JO41_02395 892fa6f0dd75817f341b45cc51d9cc3e 243 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 7 243 31.914 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JO41_02395 892fa6f0dd75817f341b45cc51d9cc3e 243 SUPERFAMILY SSF75445 146 224 7.33E-20 T 14-10-2018 JO41_02395 892fa6f0dd75817f341b45cc51d9cc3e 243 Gene3D G3DSA:3.30.70.260 142 222 2.4E-70 T 14-10-2018 JO41_02395 892fa6f0dd75817f341b45cc51d9cc3e 243 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 26 239 2.4E-68 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JO41_00285 4e0f1fe133636b01c9859bd72d5ab0cb 334 Gene3D G3DSA:3.40.190.10 46 328 2.0E-95 T 14-10-2018 JO41_00285 4e0f1fe133636b01c9859bd72d5ab0cb 334 SUPERFAMILY SSF53850 41 329 2.37E-73 T 14-10-2018 JO41_00285 4e0f1fe133636b01c9859bd72d5ab0cb 334 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 12 328 1.0E-100 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JO41_00285 4e0f1fe133636b01c9859bd72d5ab0cb 334 Gene3D G3DSA:3.40.190.10 128 264 2.0E-95 T 14-10-2018 JO41_00285 4e0f1fe133636b01c9859bd72d5ab0cb 334 Pfam PF16868 NMT1-like family 46 328 1.0E-82 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JO41_00160 f68409d0913c01401383601677832bab 185 Pfam PF13432 Tetratricopeptide repeat 23 73 2.6E-4 T 14-10-2018 JO41_00160 f68409d0913c01401383601677832bab 185 Gene3D G3DSA:1.25.40.10 1 181 1.7E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00160 f68409d0913c01401383601677832bab 185 Pfam PF07719 Tetratricopeptide repeat 108 139 6.5E-6 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 JO41_00160 f68409d0913c01401383601677832bab 185 SUPERFAMILY SSF48452 4 171 7.59E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00160 f68409d0913c01401383601677832bab 185 SMART SM00028 39 72 2.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00160 f68409d0913c01401383601677832bab 185 SMART SM00028 73 106 0.67 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00160 f68409d0913c01401383601677832bab 185 SMART SM00028 107 140 0.005 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00160 f68409d0913c01401383601677832bab 185 SMART SM00028 5 38 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 259 322 1.7E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 238 1.3E-24 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 SUPERFAMILY SSF47789 264 333 1.96E-22 T 14-10-2018 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 Gene3D G3DSA:1.10.150.20 235 350 5.6E-29 T 14-10-2018 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 77 169 2.4E-14 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 Gene3D G3DSA:2.170.120.12 57 187 2.3E-74 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 SUPERFAMILY SSF55257 18 244 1.01E-29 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 270 329 4.0E-13 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 SUPERFAMILY SSF56553 57 188 5.58E-26 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 330 33.684 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 Gene3D G3DSA:3.30.1360.10 26 234 2.3E-74 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 329 1.1E-110 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_04355 7a2a8f621dddcab22f1f9c5b095392d4 351 SMART SM00662 27 244 7.9E-53 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JO41_11885 629b351a0bdd0954373b5e546abf45a1 138 Gene3D G3DSA:1.10.10.10 22 85 2.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_11885 629b351a0bdd0954373b5e546abf45a1 138 SUPERFAMILY SSF46785 22 75 1.89E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_11885 629b351a0bdd0954373b5e546abf45a1 138 SUPERFAMILY SSF47979 81 137 8.5E-12 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JO41_11885 629b351a0bdd0954373b5e546abf45a1 138 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 81 137 4.3E-11 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 JO41_11885 629b351a0bdd0954373b5e546abf45a1 138 SMART SM00529 42 136 3.8E-10 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 JO41_11885 629b351a0bdd0954373b5e546abf45a1 138 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 24 70 1.2E-5 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 JO41_11885 629b351a0bdd0954373b5e546abf45a1 138 Gene3D G3DSA:1.10.60.10 86 137 3.8E-21 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JO41_10265 02596b09e5daaf63cd74e2b35cf5aeb5 403 SUPERFAMILY SSF53686 30 353 5.24E-57 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JO41_10265 02596b09e5daaf63cd74e2b35cf5aeb5 403 Gene3D G3DSA:3.40.50.1100 74 197 6.0E-140 T 14-10-2018 JO41_10265 02596b09e5daaf63cd74e2b35cf5aeb5 403 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 7 398 8.2E-195 T 14-10-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 JO41_10265 02596b09e5daaf63cd74e2b35cf5aeb5 403 Gene3D G3DSA:3.40.50.1100 31 395 6.0E-140 T 14-10-2018 JO41_10265 02596b09e5daaf63cd74e2b35cf5aeb5 403 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 22 397 2.7E-188 T 14-10-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 JO41_10265 02596b09e5daaf63cd74e2b35cf5aeb5 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 38 364 2.5E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JO41_00915 805293f17375642da92eaa8b52062d5c 805 SUPERFAMILY SSF52540 40 513 1.09E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00915 805293f17375642da92eaa8b52062d5c 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 671 773 8.4E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JO41_00915 805293f17375642da92eaa8b52062d5c 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 588 604 3.1E-13 T 14-10-2018 JO41_00915 805293f17375642da92eaa8b52062d5c 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 699 718 3.1E-13 T 14-10-2018 JO41_00915 805293f17375642da92eaa8b52062d5c 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 71 90 3.1E-13 T 14-10-2018 JO41_00915 805293f17375642da92eaa8b52062d5c 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 669 688 3.1E-13 T 14-10-2018 JO41_00915 805293f17375642da92eaa8b52062d5c 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 747 3.1E-13 T 14-10-2018 JO41_00915 805293f17375642da92eaa8b52062d5c 805 Pfam PF13654 AAA domain 39 561 6.0E-129 T 14-10-2018 JO41_00915 805293f17375642da92eaa8b52062d5c 805 SUPERFAMILY SSF54211 587 780 4.93E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_00915 805293f17375642da92eaa8b52062d5c 805 Gene3D G3DSA:3.30.230.10 563 800 2.3E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_00915 805293f17375642da92eaa8b52062d5c 805 Gene3D G3DSA:3.40.50.300 245 475 8.1E-44 T 14-10-2018 JO41_00915 805293f17375642da92eaa8b52062d5c 805 Gene3D G3DSA:3.40.50.300 17 177 1.2E-22 T 14-10-2018 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 Gene3D G3DSA:3.30.460.10 7 156 5.3E-22 T 14-10-2018 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 SMART SM00954 50 175 1.1E-15 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 SUPERFAMILY SSF81301 13 204 2.29E-33 T 14-10-2018 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 SUPERFAMILY SSF48452 255 389 1.62E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 Gene3D G3DSA:1.25.40.10 179 404 2.3E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 SMART SM00028 254 287 360.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 SMART SM00028 291 324 0.0071 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 SMART SM00028 325 358 0.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_00560 2ace2cbf752944ca6d2235bc8089e325 409 Pfam PF04607 Region found in RelA / SpoT proteins 50 170 2.6E-20 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 104 1.8E-5 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 SMART SM01086 378 474 4.6E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 5 486 40.406 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 SUPERFAMILY SSF52540 7 484 9.98E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 Pfam PF07724 AAA domain (Cdc48 subfamily) 233 371 2.1E-37 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 Gene3D G3DSA:1.10.8.60 378 483 3.7E-38 T 14-10-2018 JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 SMART SM00382 53 375 4.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01325 d34184f2621a78083d9e4f2d27e180ac 486 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 8 486 2.8E-186 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JO41_01170 54b5950f4156d346af44791ea4ffcade 378 Pfam PF01098 Cell cycle protein 22 374 6.7E-92 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_01170 54b5950f4156d346af44791ea4ffcade 378 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 20 371 1.6E-103 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_06800 8bd8b18efd88c196c0d01befdf2dc36c 377 Gene3D G3DSA:3.40.50.300 4 276 1.1E-8 T 14-10-2018 JO41_06800 8bd8b18efd88c196c0d01befdf2dc36c 377 SUPERFAMILY SSF52540 15 255 1.0E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06800 8bd8b18efd88c196c0d01befdf2dc36c 377 Pfam PF13166 AAA domain 135 269 5.5E-11 T 14-10-2018 IPR026866 Protein CR006, P-loop domain JO41_07875 a6a15dda24188878a500153c68cca372 369 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_07875 a6a15dda24188878a500153c68cca372 369 Gene3D G3DSA:2.40.50.100 245 354 7.8E-14 T 14-10-2018 JO41_07875 a6a15dda24188878a500153c68cca372 369 Gene3D G3DSA:3.40.50.300 1 244 3.0E-66 T 14-10-2018 JO41_07875 a6a15dda24188878a500153c68cca372 369 Pfam PF00005 ABC transporter 19 167 5.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_07875 a6a15dda24188878a500153c68cca372 369 Gene3D G3DSA:2.40.50.140 284 342 7.8E-14 T 14-10-2018 JO41_07875 a6a15dda24188878a500153c68cca372 369 SUPERFAMILY SSF52540 4 249 8.73E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07875 a6a15dda24188878a500153c68cca372 369 SMART SM00382 28 217 6.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_07875 a6a15dda24188878a500153c68cca372 369 SUPERFAMILY SSF50331 243 357 2.67E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO41_05175 eec55e4894f0eb135ff31d482f7ab4f5 320 SMART SM00327 81 254 2.8E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_05175 eec55e4894f0eb135ff31d482f7ab4f5 320 Gene3D G3DSA:3.40.50.410 76 278 2.4E-34 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_05175 eec55e4894f0eb135ff31d482f7ab4f5 320 SUPERFAMILY SSF53300 82 230 1.78E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_05175 eec55e4894f0eb135ff31d482f7ab4f5 320 Pfam PF13519 von Willebrand factor type A domain 84 191 1.3E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_10810 270c777b4c2d5b60983a0bf9968f4c3c 268 Gene3D G3DSA:3.40.50.80 145 267 1.7E-7 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO41_10810 270c777b4c2d5b60983a0bf9968f4c3c 268 SUPERFAMILY SSF52343 148 264 4.19E-7 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO41_09610 2eafa706995400bf8ec7d69399ef7054 149 Pfam PF04977 Septum formation initiator 17 92 2.5E-12 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC JO41_12900 b9ce375ddb0ea4e7d01ead80599ceb34 194 Pfam PF06854 Bacteriophage Gp15 protein 8 163 3.3E-31 T 14-10-2018 IPR009660 Bacteriophage A500, Gp15 JO41_08145 b9ce375ddb0ea4e7d01ead80599ceb34 194 Pfam PF06854 Bacteriophage Gp15 protein 8 163 3.3E-31 T 14-10-2018 IPR009660 Bacteriophage A500, Gp15 JO41_08445 df2f88b78bb422477f427677b3ea8a7f 239 Gene3D G3DSA:2.20.25.110 140 198 6.3E-35 T 14-10-2018 JO41_08445 df2f88b78bb422477f427677b3ea8a7f 239 Pfam PF13649 Methyltransferase domain 37 132 4.0E-11 T 14-10-2018 JO41_08445 df2f88b78bb422477f427677b3ea8a7f 239 Gene3D G3DSA:3.40.50.150 19 235 6.3E-35 T 14-10-2018 JO41_08445 df2f88b78bb422477f427677b3ea8a7f 239 SUPERFAMILY SSF53335 2 239 2.91E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_09560 cb625e725bcc975eee905ef59567a9da 580 Pfam PF02653 Branched-chain amino acid transport system / permease component 276 569 1.7E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_12730 c7a8eccf3b9596b5a62293a517fed0c5 286 Gene3D G3DSA:1.10.10.60 78 119 1.7E-6 T 14-10-2018 JO41_12730 c7a8eccf3b9596b5a62293a517fed0c5 286 SUPERFAMILY SSF47413 92 139 4.22E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO41_12730 c7a8eccf3b9596b5a62293a517fed0c5 286 Pfam PF01381 Helix-turn-helix 92 114 1.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO41_06345 abac1349d9b9d99426a5c4985351bf88 524 Gene3D G3DSA:3.30.420.40 249 512 3.6E-53 T 14-10-2018 JO41_06345 abac1349d9b9d99426a5c4985351bf88 524 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 251 5.3E-48 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JO41_06345 abac1349d9b9d99426a5c4985351bf88 524 Gene3D G3DSA:3.30.420.40 1 248 1.8E-60 T 14-10-2018 JO41_06345 abac1349d9b9d99426a5c4985351bf88 524 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 292 457 3.1E-20 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JO41_06345 abac1349d9b9d99426a5c4985351bf88 524 PIRSF PIRSF000538 3 510 1.9E-115 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO41_06345 abac1349d9b9d99426a5c4985351bf88 524 SUPERFAMILY SSF53067 253 505 3.39E-44 T 14-10-2018 JO41_06345 abac1349d9b9d99426a5c4985351bf88 524 SUPERFAMILY SSF53067 4 254 3.46E-55 T 14-10-2018 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 SUPERFAMILY SSF51905 1 303 8.1E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.0E-33 T 14-10-2018 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.0E-33 T 14-10-2018 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 4.0E-33 T 14-10-2018 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 4.0E-33 T 14-10-2018 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 4.0E-33 T 14-10-2018 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 Gene3D G3DSA:3.50.50.60 7 302 9.9E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 1.7E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 Gene3D G3DSA:3.50.50.60 122 244 9.9E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 303 7.9E-116 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_03495 c25ce41812f18cb1a9d39da5a96e8e7b 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 1.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_10995 b113d79f85caef7bb7871879d0bd8054 186 SUPERFAMILY SSF55729 6 178 3.19E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_10995 b113d79f85caef7bb7871879d0bd8054 186 Gene3D G3DSA:3.40.630.30 3 181 1.3E-24 T 14-10-2018 JO41_10995 b113d79f85caef7bb7871879d0bd8054 186 Pfam PF00583 Acetyltransferase (GNAT) family 21 154 9.1E-7 T 14-10-2018 IPR000182 GNAT domain JO41_03765 b9cb3ed097ac2a7925a56c40f7d42824 569 Gene3D G3DSA:1.10.287.950 315 567 1.9E-37 T 14-10-2018 JO41_03765 b9cb3ed097ac2a7925a56c40f7d42824 569 SUPERFAMILY SSF58104 351 556 8.24E-36 T 14-10-2018 JO41_03765 b9cb3ed097ac2a7925a56c40f7d42824 569 SMART SM00283 371 566 2.1E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_03765 b9cb3ed097ac2a7925a56c40f7d42824 569 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 416 553 3.5E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_04215 1a18b4bbe7859ee4af87c6f389b1b045 215 Pfam PF00578 AhpC/TSA family 11 137 1.2E-26 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO41_04215 1a18b4bbe7859ee4af87c6f389b1b045 215 SUPERFAMILY SSF52833 6 213 9.08E-62 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO41_04215 1a18b4bbe7859ee4af87c6f389b1b045 215 Hamap MF_00401 Peroxiredoxin. 8 214 47.596 T 14-10-2018 IPR022915 Peroxiredoxin, TDXH subfamily GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JO41_04215 1a18b4bbe7859ee4af87c6f389b1b045 215 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 201 5.9E-11 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO41_04215 1a18b4bbe7859ee4af87c6f389b1b045 215 PIRSF PIRSF000239 3 215 1.7E-70 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO41_04215 1a18b4bbe7859ee4af87c6f389b1b045 215 Gene3D G3DSA:3.40.30.10 9 148 1.3E-39 T 14-10-2018 JO41_04215 1a18b4bbe7859ee4af87c6f389b1b045 215 Gene3D G3DSA:3.30.1020.10 149 215 3.1E-27 T 14-10-2018 JO41_03205 2718ec270c00bba983d8076696d96a14 516 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 253 330 1.2E-9 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO41_03205 2718ec270c00bba983d8076696d96a14 516 SUPERFAMILY SSF53901 180 288 1.6E-12 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_03205 2718ec270c00bba983d8076696d96a14 516 Gene3D G3DSA:3.40.47.10 192 300 1.1E-9 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_02915 b5bba9a0ea705f386b522e895b48f29c 200 Pfam PF02635 DsrE/DsrF-like family 118 176 1.9E-5 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein JO41_02915 b5bba9a0ea705f386b522e895b48f29c 200 SUPERFAMILY SSF75169 103 193 4.04E-14 T 14-10-2018 IPR027396 DsrEFH-like JO41_02915 b5bba9a0ea705f386b522e895b48f29c 200 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 4 28 - T 14-10-2018 IPR001455 TusA-like domain JO41_02915 b5bba9a0ea705f386b522e895b48f29c 200 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 199 1.7E-61 T 14-10-2018 IPR019870 Selenium metabolism protein YedF JO41_02915 b5bba9a0ea705f386b522e895b48f29c 200 Pfam PF01206 Sulfurtransferase TusA 2 67 1.8E-13 T 14-10-2018 IPR001455 TusA-like domain JO41_02915 b5bba9a0ea705f386b522e895b48f29c 200 SUPERFAMILY SSF64307 1 66 3.79E-13 T 14-10-2018 IPR036868 TusA-like domain superfamily JO41_02915 b5bba9a0ea705f386b522e895b48f29c 200 Gene3D G3DSA:3.30.110.40 1 99 4.5E-20 T 14-10-2018 IPR036868 TusA-like domain superfamily JO41_10575 7627ff70629d60d7e188310f87b77712 393 Gene3D G3DSA:3.90.1150.10 265 392 1.4E-28 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_10575 7627ff70629d60d7e188310f87b77712 393 PIRSF PIRSF000390 8 392 1.9E-97 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_10575 7627ff70629d60d7e188310f87b77712 393 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 21 384 5.4E-108 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_10575 7627ff70629d60d7e188310f87b77712 393 SUPERFAMILY SSF53383 11 389 4.64E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_10575 7627ff70629d60d7e188310f87b77712 393 Gene3D G3DSA:3.40.640.10 1 263 9.6E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_09440 5ec07b8f0ca2f3f8162835084db06e0b 463 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO41_09440 5ec07b8f0ca2f3f8162835084db06e0b 463 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 443 4.4E-85 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO41_09440 5ec07b8f0ca2f3f8162835084db06e0b 463 SUPERFAMILY SSF117143 91 423 5.36E-68 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JO41_09440 5ec07b8f0ca2f3f8162835084db06e0b 463 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 384 461 2.4E-18 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_09440 5ec07b8f0ca2f3f8162835084db06e0b 463 Pfam PF07559 Flagellar basal body protein FlaE 200 343 1.4E-16 T 14-10-2018 IPR011491 Flagellar hook protein FlgE JO41_09440 5ec07b8f0ca2f3f8162835084db06e0b 463 Pfam PF00460 Flagella basal body rod protein 8 35 8.2E-13 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO41_09440 5ec07b8f0ca2f3f8162835084db06e0b 463 Gene3D G3DSA:2.60.98.20 168 344 7.3E-9 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 SUPERFAMILY SSF110997 239 308 7.85E-10 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 Gene3D G3DSA:2.40.40.10 27 120 1.6E-37 T 14-10-2018 IPR036908 RlpA-like domain superfamily JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 8 119 23.519 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 Pfam PF05036 Sporulation related domain 241 308 4.2E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 SUPERFAMILY SSF50685 33 120 3.31E-13 T 14-10-2018 IPR036908 RlpA-like domain superfamily JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 Pfam PF03330 Lytic transglycolase 27 115 1.1E-25 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 31 145 2.0E-43 T 14-10-2018 IPR012997 Rare lipoprotein A JO41_04565 9f1c809279ba9714f0cb397e6ad153b9 312 Gene3D G3DSA:3.30.70.1070 240 310 3.8E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 SUPERFAMILY SSF53223 227 333 2.88E-24 T 14-10-2018 JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 Gene3D G3DSA:3.40.50.720 333 469 3.1E-69 T 14-10-2018 JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 Pfam PF01487 Type I 3-dehydroquinase 6 203 3.2E-28 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 241 321 5.1E-19 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 Gene3D G3DSA:3.20.20.70 2 231 8.3E-33 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 349 423 1.6E-6 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 SUPERFAMILY SSF51569 3 209 6.59E-29 T 14-10-2018 JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 SUPERFAMILY SSF51735 334 488 1.94E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_02390 4afc6bd3769cf14d8df347c2e2229239 491 Gene3D G3DSA:3.40.50.10860 239 488 3.1E-69 T 14-10-2018 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 9.3E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 9.3E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 9.3E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 9.3E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 Gene3D G3DSA:3.90.230.10 1 252 3.4E-89 T 14-10-2018 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 248 1.5E-86 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 Pfam PF00557 Metallopeptidase family M24 12 238 3.5E-46 T 14-10-2018 IPR000994 Peptidase M24 JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 SUPERFAMILY SSF55920 1 249 1.02E-73 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like JO41_05260 321ac2698d35ec983ffc3f084016e8f4 254 Hamap MF_01974 Methionine aminopeptidase [map]. 2 249 37.397 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 SMART SM00065 29 196 1.8E-17 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 SUPERFAMILY SSF55781 14 204 1.2E-26 T 14-10-2018 JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 Pfam PF01966 HD domain 214 362 7.8E-16 T 14-10-2018 IPR006674 HD domain JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 SMART SM00471 207 372 1.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 Gene3D G3DSA:1.10.3210.10 192 416 6.7E-68 T 14-10-2018 JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 SUPERFAMILY SSF109604 208 403 6.57E-30 T 14-10-2018 JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 Gene3D G3DSA:3.30.450.40 5 191 6.2E-30 T 14-10-2018 IPR029016 GAF-like domain superfamily JO41_03895 19af3410cb46cf8ba8317d69f867e0ed 427 Pfam PF01590 GAF domain 33 185 7.2E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO41_03355 03d8e848e104c7f8a9b5af8dd1ee9441 238 Pfam PF14559 Tetratricopeptide repeat 109 156 4.9E-7 T 14-10-2018 JO41_03355 03d8e848e104c7f8a9b5af8dd1ee9441 238 Pfam PF13174 Tetratricopeptide repeat 66 89 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03355 03d8e848e104c7f8a9b5af8dd1ee9441 238 Pfam PF13176 Tetratricopeptide repeat 32 56 0.0075 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03355 03d8e848e104c7f8a9b5af8dd1ee9441 238 SUPERFAMILY SSF48452 26 156 3.35E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03355 03d8e848e104c7f8a9b5af8dd1ee9441 238 Gene3D G3DSA:1.25.40.10 16 208 3.1E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10645 ec4a60dd2ac88e849bb06de2aa991aaf 135 Gene3D G3DSA:3.10.129.10 1 133 1.1E-37 T 14-10-2018 JO41_10645 ec4a60dd2ac88e849bb06de2aa991aaf 135 PIRSF PIRSF014972 1 132 3.8E-35 T 14-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase JO41_10645 ec4a60dd2ac88e849bb06de2aa991aaf 135 SUPERFAMILY SSF54637 2 124 2.49E-35 T 14-10-2018 IPR029069 HotDog domain superfamily JO41_00055 edce457b632411ffc615d610ee7097cb 318 Gene3D G3DSA:1.10.287.1080 32 169 6.0E-33 T 14-10-2018 JO41_00055 edce457b632411ffc615d610ee7097cb 318 SUPERFAMILY SSF101386 36 139 1.5E-17 T 14-10-2018 JO41_00055 edce457b632411ffc615d610ee7097cb 318 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 58 136 1.8E-17 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JO41_00055 edce457b632411ffc615d610ee7097cb 318 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 214 269 1.8E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JO41_00055 edce457b632411ffc615d610ee7097cb 318 SUPERFAMILY SSF101386 180 279 2.06E-23 T 14-10-2018 JO41_00055 edce457b632411ffc615d610ee7097cb 318 Gene3D G3DSA:1.10.287.1080 174 305 5.7E-46 T 14-10-2018 JO41_00055 edce457b632411ffc615d610ee7097cb 318 TIGRFAM TIGR00444 mazG: MazG family protein 43 300 4.9E-75 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG JO41_04070 8231448ac78a663a263ca37e0e9786c0 495 Gene3D G3DSA:1.10.3210.10 217 494 2.6E-57 T 14-10-2018 JO41_04070 8231448ac78a663a263ca37e0e9786c0 495 SMART SM00471 325 396 0.0063 T 14-10-2018 IPR003607 HD/PDEase domain JO41_04070 8231448ac78a663a263ca37e0e9786c0 495 SUPERFAMILY SSF109604 229 480 1.28E-52 T 14-10-2018 JO41_04070 8231448ac78a663a263ca37e0e9786c0 495 TIGRFAM TIGR00277 HDIG: HDIG domain 327 426 1.6E-7 T 14-10-2018 IPR006675 HDIG domain JO41_04070 8231448ac78a663a263ca37e0e9786c0 495 Pfam PF08668 HDOD domain 238 431 2.9E-52 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JO41_09305 300219e13757b68f2b0e66805c765dff 391 Gene3D G3DSA:1.20.1090.10 185 391 5.6E-48 T 14-10-2018 JO41_09305 300219e13757b68f2b0e66805c765dff 391 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JO41_09305 300219e13757b68f2b0e66805c765dff 391 SUPERFAMILY SSF56796 3 389 1.7E-110 T 14-10-2018 JO41_09305 300219e13757b68f2b0e66805c765dff 391 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JO41_09305 300219e13757b68f2b0e66805c765dff 391 Gene3D G3DSA:3.40.50.1970 1 184 5.9E-52 T 14-10-2018 JO41_09305 300219e13757b68f2b0e66805c765dff 391 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 367 1.0E-97 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JO41_05265 ddbf7087cc6e819ffc88f21e55f8f12b 272 SUPERFAMILY SSF46565 2 91 6.15E-19 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_05265 ddbf7087cc6e819ffc88f21e55f8f12b 272 Pfam PF00226 DnaJ domain 3 71 1.5E-14 T 14-10-2018 IPR001623 DnaJ domain JO41_05265 ddbf7087cc6e819ffc88f21e55f8f12b 272 SMART SM00271 2 66 8.0E-15 T 14-10-2018 IPR001623 DnaJ domain JO41_05265 ddbf7087cc6e819ffc88f21e55f8f12b 272 Gene3D G3DSA:1.10.287.110 1 86 2.4E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_05265 ddbf7087cc6e819ffc88f21e55f8f12b 272 PRINTS PR00625 DnaJ domain signature 23 38 1.1E-7 T 14-10-2018 IPR001623 DnaJ domain JO41_05265 ddbf7087cc6e819ffc88f21e55f8f12b 272 PRINTS PR00625 DnaJ domain signature 5 23 1.1E-7 T 14-10-2018 IPR001623 DnaJ domain JO41_05265 ddbf7087cc6e819ffc88f21e55f8f12b 272 PRINTS PR00625 DnaJ domain signature 46 66 1.1E-7 T 14-10-2018 IPR001623 DnaJ domain JO41_09210 de3da76fdb2ef2030b66dd33c6ddb318 246 Pfam PF04620 Flagellar filament outer layer protein Flaa 29 237 1.1E-57 T 14-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 JO41_11145 90ac4cc4d5cace36b3427c98317b4f52 283 Hamap MF_00361 NAD kinase [nadK]. 3 276 28.858 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO41_11145 90ac4cc4d5cace36b3427c98317b4f52 283 Pfam PF01513 ATP-NAD kinase 49 259 1.6E-52 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO41_11145 90ac4cc4d5cace36b3427c98317b4f52 283 SUPERFAMILY SSF111331 4 278 1.15E-74 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JO41_11145 90ac4cc4d5cace36b3427c98317b4f52 283 Gene3D G3DSA:2.60.200.30 116 253 4.7E-75 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JO41_11145 90ac4cc4d5cace36b3427c98317b4f52 283 Gene3D G3DSA:3.40.50.10330 14 269 4.7E-75 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 SUPERFAMILY SSF46767 76 163 4.45E-28 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 132 138 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 162 38.287 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 77 161 4.2E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 Gene3D G3DSA:3.30.160.70 1 72 7.1E-18 T 14-10-2018 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 78 163 3.3E-32 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 73 1.1E-6 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 Gene3D G3DSA:1.10.10.10 74 163 5.7E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_07985 2f1cde8a0dc4dfdbfc29c825fad9e1a1 164 SUPERFAMILY SSF53155 3 81 9.22E-20 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JO41_02550 26a96d403705b05b934a29a5abb5db3a 131 Pfam PF01850 PIN domain 2 116 4.9E-13 T 14-10-2018 IPR002716 PIN domain JO41_02550 26a96d403705b05b934a29a5abb5db3a 131 SUPERFAMILY SSF88723 1 115 9.25E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_02550 26a96d403705b05b934a29a5abb5db3a 131 Gene3D G3DSA:3.40.50.1010 1 125 1.3E-19 T 14-10-2018 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 Gene3D G3DSA:1.10.8.60 358 422 7.8E-18 T 14-10-2018 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 471 3.8E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 491 3.8E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 Pfam PF02954 Bacterial regulatory protein, Fis family 453 487 9.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 Gene3D G3DSA:3.40.50.300 194 357 6.6E-39 T 14-10-2018 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 SUPERFAMILY SSF52540 195 428 1.03E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 Gene3D G3DSA:1.10.10.60 439 492 6.8E-12 T 14-10-2018 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 SUPERFAMILY SSF55781 27 187 7.46E-18 T 14-10-2018 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 Pfam PF00158 Sigma-54 interaction domain 196 353 2.8E-34 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 Pfam PF13492 GAF domain 30 163 9.3E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 SMART SM00065 28 176 1.2E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 SMART SM00382 215 351 0.0059 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 SUPERFAMILY SSF46689 400 490 4.48E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_02690 1fa9ce88e353a04827d5a45bf63831d6 494 Gene3D G3DSA:3.30.450.40 26 173 3.5E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily JO41_06355 8f44def1bafcbbc554e6604455aa02b0 435 SUPERFAMILY SSF53850 25 432 1.96E-63 T 14-10-2018 JO41_06355 8f44def1bafcbbc554e6604455aa02b0 435 Pfam PF01547 Bacterial extracellular solute-binding protein 48 344 5.8E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_06355 8f44def1bafcbbc554e6604455aa02b0 435 Gene3D G3DSA:3.40.190.10 26 435 1.6E-75 T 14-10-2018 JO41_04685 b5a585798af955fd5f96517046985490 368 SUPERFAMILY SSF52540 4 249 4.26E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04685 b5a585798af955fd5f96517046985490 368 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_04685 b5a585798af955fd5f96517046985490 368 SMART SM00382 28 218 4.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04685 b5a585798af955fd5f96517046985490 368 Gene3D G3DSA:2.40.50.140 293 351 1.1E-7 T 14-10-2018 JO41_04685 b5a585798af955fd5f96517046985490 368 Pfam PF08402 TOBE domain 287 351 1.4E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JO41_04685 b5a585798af955fd5f96517046985490 368 SUPERFAMILY SSF50331 245 351 6.52E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JO41_04685 b5a585798af955fd5f96517046985490 368 Pfam PF00005 ABC transporter 20 167 2.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04685 b5a585798af955fd5f96517046985490 368 Gene3D G3DSA:3.40.50.300 3 229 6.2E-65 T 14-10-2018 JO41_04685 b5a585798af955fd5f96517046985490 368 Gene3D G3DSA:2.40.50.940 231 292 1.1E-7 T 14-10-2018 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SUPERFAMILY SSF48452 652 925 8.72E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SUPERFAMILY SSF48452 848 1151 1.06E-50 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 Pfam PF13432 Tetratricopeptide repeat 816 878 1.1E-6 T 14-10-2018 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 Pfam PF13432 Tetratricopeptide repeat 892 948 2.3E-5 T 14-10-2018 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 Pfam PF13432 Tetratricopeptide repeat 1021 1078 4.7E-4 T 14-10-2018 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 Pfam PF13432 Tetratricopeptide repeat 952 1014 1.8E-5 T 14-10-2018 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 Pfam PF14559 Tetratricopeptide repeat 1102 1155 5.1E-6 T 14-10-2018 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 Gene3D G3DSA:1.25.40.10 664 1050 6.0E-61 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 948 981 5.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 914 947 0.034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 696 729 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 528 561 200.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 778 811 55.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 1084 1117 0.65 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 812 845 6.4E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 1016 1049 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 1118 1151 0.0027 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 880 913 1.1E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 1050 1083 2.0E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 159 192 52.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 846 879 0.13 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00028 982 1015 0.13 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 Gene3D G3DSA:1.25.40.10 1051 1163 1.1E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00671 880 911 120.0 T 14-10-2018 IPR006597 Sel1-like repeat JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00671 334 369 12.0 T 14-10-2018 IPR006597 Sel1-like repeat JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00671 812 843 95.0 T 14-10-2018 IPR006597 Sel1-like repeat JO41_04810 4873317f6bb87e810c7c6c0433f1416e 1164 SMART SM00671 914 945 9.5 T 14-10-2018 IPR006597 Sel1-like repeat JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 352 1.6E-157 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 Pfam PF03462 PCRF domain 11 202 2.1E-70 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 Gene3D G3DSA:3.30.70.1660 110 340 9.7E-98 T 14-10-2018 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 Gene3D G3DSA:3.30.160.20 209 295 9.7E-98 T 14-10-2018 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 39.105 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 SUPERFAMILY SSF75620 9 350 1.19E-132 T 14-10-2018 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 Pfam PF00472 RF-1 domain 210 319 2.4E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 SMART SM00937 63 177 1.8E-57 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JO41_11305 5e456375d346b29e7e82db6b08df78e6 355 Gene3D G3DSA:1.20.58.410 4 100 1.7E-6 T 14-10-2018 JO41_10120 08418447e84856ea1ebcb3249c03d06e 169 Pfam PF02643 Uncharacterized ACR, COG1430 55 157 4.4E-29 T 14-10-2018 IPR003795 Protein of unknown function DUF192 JO41_10120 08418447e84856ea1ebcb3249c03d06e 169 Gene3D G3DSA:2.60.120.1140 38 168 6.5E-36 T 14-10-2018 IPR038695 Saro_0823-like superfamily JO41_01310 3c47d5e42a6854f37b93db0981b67b1b 444 SUPERFAMILY SSF54001 9 441 8.42E-116 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO41_01310 3c47d5e42a6854f37b93db0981b67b1b 444 PIRSF PIRSF005700 1 443 1.9E-168 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 JO41_01310 3c47d5e42a6854f37b93db0981b67b1b 444 Pfam PF03051 Peptidase C1-like family 3 439 1.1E-184 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 JO41_01310 3c47d5e42a6854f37b93db0981b67b1b 444 Gene3D G3DSA:3.90.70.10 51 442 4.3E-162 T 14-10-2018 JO41_01310 3c47d5e42a6854f37b93db0981b67b1b 444 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 360 370 - T 14-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 JO41_01310 3c47d5e42a6854f37b93db0981b67b1b 444 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 62 73 - T 14-10-2018 IPR000169 Cysteine peptidase, cysteine active site JO41_08535 6d5629b15ffdafb9707be2bae8660417 129 SUPERFAMILY SSF54427 1 128 2.14E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily JO41_08535 6d5629b15ffdafb9707be2bae8660417 129 Pfam PF12680 SnoaL-like domain 10 113 3.2E-9 T 14-10-2018 IPR037401 SnoaL-like domain JO41_08535 6d5629b15ffdafb9707be2bae8660417 129 Gene3D G3DSA:3.10.450.50 5 129 8.0E-25 T 14-10-2018 JO41_11020 cb3c512caeeb0d2df2a5a5786530ccb9 413 Gene3D G3DSA:2.120.10.30 122 244 1.4E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JO41_11020 cb3c512caeeb0d2df2a5a5786530ccb9 413 SUPERFAMILY SSF63829 71 236 2.81E-8 T 14-10-2018 JO41_11895 38807c6f735acc6997a21c328ff38f26 301 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11895 38807c6f735acc6997a21c328ff38f26 301 SMART SM00382 45 231 2.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11895 38807c6f735acc6997a21c328ff38f26 301 SUPERFAMILY SSF52540 17 242 9.8E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11895 38807c6f735acc6997a21c328ff38f26 301 Gene3D G3DSA:3.40.50.300 18 269 1.3E-61 T 14-10-2018 JO41_11895 38807c6f735acc6997a21c328ff38f26 301 Pfam PF00005 ABC transporter 37 183 6.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09835 017cbef649cc6b3575bb5de62d5a0db3 694 SUPERFAMILY SSF48452 34 175 5.06E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09835 017cbef649cc6b3575bb5de62d5a0db3 694 Gene3D G3DSA:1.25.40.10 22 276 1.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_01740 2a584cfa03f8967886ca0df06707c45d 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.972 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO41_01740 2a584cfa03f8967886ca0df06707c45d 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.4E-106 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO41_01740 2a584cfa03f8967886ca0df06707c45d 247 Gene3D G3DSA:3.30.70.980 86 236 1.2E-55 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO41_01740 2a584cfa03f8967886ca0df06707c45d 247 Gene3D G3DSA:3.30.70.980 134 203 1.2E-55 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO41_01740 2a584cfa03f8967886ca0df06707c45d 247 Pfam PF01709 Transcriptional regulator 5 237 5.0E-101 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO41_01740 2a584cfa03f8967886ca0df06707c45d 247 Gene3D G3DSA:1.10.10.200 1 80 7.6E-37 T 14-10-2018 IPR017856 Integrase-like, N-terminal JO41_01740 2a584cfa03f8967886ca0df06707c45d 247 SUPERFAMILY SSF75625 3 243 1.83E-98 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JO41_04900 417330f1f4de1e9e549256bdd76a440a 302 Gene3D G3DSA:1.10.10.10 1 61 1.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_04900 417330f1f4de1e9e549256bdd76a440a 302 Pfam PF08279 HTH domain 5 56 1.7E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JO41_04900 417330f1f4de1e9e549256bdd76a440a 302 SUPERFAMILY SSF46785 1 59 2.61E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_04900 417330f1f4de1e9e549256bdd76a440a 302 PIRSF PIRSF016838 1 301 1.4E-27 T 14-10-2018 IPR028349 Protein PafC JO41_04900 417330f1f4de1e9e549256bdd76a440a 302 Pfam PF13280 WYL domain 128 296 5.2E-31 T 14-10-2018 IPR026881 WYL domain JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 PIRSF PIRSF000149 1 349 4.3E-126 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 1.5E-44 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 1.5E-44 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 157 175 1.5E-44 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 297 1.5E-44 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 242 259 1.5E-44 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 109 4.4E-33 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 2 342 2.6E-130 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 Gene3D G3DSA:3.40.50.720 2 347 9.6E-149 T 14-10-2018 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 168 330 3.3E-64 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 SUPERFAMILY SSF51735 1 176 3.72E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 161 168 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 SUPERFAMILY SSF55347 162 330 4.99E-71 T 14-10-2018 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 Gene3D G3DSA:3.30.360.10 164 334 9.6E-149 T 14-10-2018 JO41_03280 c7a45eb24bc680300bbbc7aea122d1a9 349 SMART SM00846 1 163 3.0E-78 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 24.914 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 Gene3D G3DSA:1.10.720.90 2 55 3.1E-15 T 14-10-2018 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 9.0E-17 T 14-10-2018 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-35 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-35 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-35 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 SUPERFAMILY SSF74731 7 117 2.62E-42 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 Gene3D G3DSA:1.10.1900.20 56 118 4.6E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.0E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03875 8e21bdecb4df5d8813b121a4fea5b1ec 119 Pfam PF00453 Ribosomal protein L20 8 108 5.7E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 Gene3D G3DSA:3.40.50.300 322 570 8.5E-86 T 14-10-2018 JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 Pfam PF00005 ABC transporter 348 496 9.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 Gene3D G3DSA:1.20.1560.10 1 319 2.6E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 Pfam PF00664 ABC transporter transmembrane region 49 280 2.5E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 SUPERFAMILY SSF90123 3 308 9.42E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 SMART SM00382 356 542 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04945 c631d01f9825164f01677b616a2e0a0a 574 SUPERFAMILY SSF52540 325 566 2.33E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 1362 1401 28.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 1438 1457 7400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 871 896 1000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 943 963 690.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 1286 1313 2300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 1464 1485 160.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 1067 1092 3100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 966 999 4000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 1410 1431 6300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 1040 1066 1900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SMART SM00710 897 923 5300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SUPERFAMILY SSF51126 752 1099 1.14E-13 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_05115 156e445d0df6936998032e1de31cbc97 1600 SUPERFAMILY SSF51126 1205 1492 3.14E-21 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_05115 156e445d0df6936998032e1de31cbc97 1600 Gene3D G3DSA:2.160.20.10 1199 1554 1.3E-10 T 14-10-2018 IPR012334 Pectin lyase fold JO41_05115 156e445d0df6936998032e1de31cbc97 1600 Gene3D G3DSA:2.160.20.20 713 1022 4.3E-6 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily JO41_11905 13d7bddf5b898c87d6179cc50bd7bc22 286 Pfam PF00950 ABC 3 transport family 7 262 2.0E-82 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 JO41_11905 13d7bddf5b898c87d6179cc50bd7bc22 286 Gene3D G3DSA:1.10.3470.10 16 266 1.6E-8 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_11905 13d7bddf5b898c87d6179cc50bd7bc22 286 SUPERFAMILY SSF81345 4 260 1.31E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_09665 667bb6bdb318508455b0c27edcddaee5 207 Gene3D G3DSA:2.60.40.2480 53 207 6.5E-62 T 14-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily JO41_09665 667bb6bdb318508455b0c27edcddaee5 207 PIRSF PIRSF017018 25 207 1.9E-66 T 14-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type JO41_09665 667bb6bdb318508455b0c27edcddaee5 207 Pfam PF10634 Fe2+ transport protein 52 204 3.3E-57 T 14-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 260 333 1.6E-32 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 31 333 5.2E-142 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 SMART SM00382 58 191 4.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 Gene3D G3DSA:1.10.10.10 264 343 3.5E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 Gene3D G3DSA:1.10.8.60 189 263 8.6E-27 T 14-10-2018 JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 SUPERFAMILY SSF46785 263 337 7.71E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 348 147.098 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 Gene3D G3DSA:3.40.50.300 27 188 2.0E-36 T 14-10-2018 JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 SUPERFAMILY SSF52540 27 259 2.25E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 258 337 1.0E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JO41_06010 70f15574d2c0f97b40ebc370d2e12fd8 348 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 18 242 1.5E-102 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 JO41_05605 ae40fd4de55c07d89d1b2762b517d98c 217 Gene3D G3DSA:1.10.150.450 15 84 9.6E-29 T 14-10-2018 JO41_05605 ae40fd4de55c07d89d1b2762b517d98c 217 Gene3D G3DSA:3.40.50.1000 5 208 9.6E-29 T 14-10-2018 IPR023214 HAD superfamily JO41_05605 ae40fd4de55c07d89d1b2762b517d98c 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 174 6.4E-6 T 14-10-2018 JO41_05605 ae40fd4de55c07d89d1b2762b517d98c 217 SUPERFAMILY SSF56784 1 192 4.66E-22 T 14-10-2018 IPR036412 HAD-like superfamily JO41_05605 ae40fd4de55c07d89d1b2762b517d98c 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 46 184 1.2E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JO41_08915 4b13d250822e07516b4dbdc2e31d21b3 279 SUPERFAMILY SSF159713 9 275 6.28E-36 T 14-10-2018 JO41_08915 4b13d250822e07516b4dbdc2e31d21b3 279 Gene3D G3DSA:3.40.50.11590 118 253 8.9E-12 T 14-10-2018 JO41_08915 4b13d250822e07516b4dbdc2e31d21b3 279 Pfam PF04016 Putative heavy-metal chelation 123 270 9.7E-15 T 14-10-2018 IPR007161 Putative heavy-metal chelation domain JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 PIRSF PIRSF000774 434 510 1.3E-15 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 PIRSF PIRSF000774 1 433 6.4E-86 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 PRINTS PR00045 Sigma-54 factor signature 385 397 1.0E-7 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 PRINTS PR00045 Sigma-54 factor signature 401 412 1.0E-7 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 PRINTS PR00045 Sigma-54 factor signature 180 197 1.0E-7 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 4.2E-14 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 Pfam PF04963 Sigma-54 factor, core binding domain 103 310 5.0E-32 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 491 498 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 Gene3D G3DSA:1.10.10.60 450 510 1.1E-17 T 14-10-2018 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 509 2.1E-100 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 Pfam PF04552 Sigma-54, DNA binding domain 436 509 9.1E-14 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 Pfam PF04552 Sigma-54, DNA binding domain 325 423 3.5E-28 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding JO41_05145 236f58aa639b9d0b9b84bc36d996cfaa 510 Gene3D G3DSA:1.10.10.1330 103 244 3.7E-11 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily JO41_05685 8132b036b3d914db12b3560798ba4336 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 236 2.4E-28 T 14-10-2018 JO41_05685 8132b036b3d914db12b3560798ba4336 238 Gene3D G3DSA:3.40.50.720 1 237 1.7E-44 T 14-10-2018 JO41_05685 8132b036b3d914db12b3560798ba4336 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.7E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_05685 8132b036b3d914db12b3560798ba4336 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.7E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_05685 8132b036b3d914db12b3560798ba4336 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.7E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_05685 8132b036b3d914db12b3560798ba4336 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.7E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_05685 8132b036b3d914db12b3560798ba4336 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JO41_05685 8132b036b3d914db12b3560798ba4336 238 SUPERFAMILY SSF51735 2 236 6.62E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_00690 bb28c5224f7bf119490d19018dc1db21 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 183 3.2E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO41_00690 bb28c5224f7bf119490d19018dc1db21 188 PIRSF PIRSF000239 1 188 9.8E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO41_00690 bb28c5224f7bf119490d19018dc1db21 188 Gene3D G3DSA:3.40.30.10 1 187 8.3E-59 T 14-10-2018 JO41_00690 bb28c5224f7bf119490d19018dc1db21 188 Pfam PF00578 AhpC/TSA family 5 134 6.9E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO41_00690 bb28c5224f7bf119490d19018dc1db21 188 SUPERFAMILY SSF52833 4 187 6.12E-57 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO41_00085 549886939a0a313e70b2aea526941283 446 Pfam PF06245 Protein of unknown function (DUF1015) 16 442 4.5E-76 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 JO41_05670 7361b68ac71005e40debc5cf948f64ac 297 SUPERFAMILY SSF140931 121 288 1.31E-26 T 14-10-2018 IPR036597 Fido-like domain superfamily JO41_05670 7361b68ac71005e40debc5cf948f64ac 297 Gene3D G3DSA:1.10.3290.10 58 286 5.1E-47 T 14-10-2018 IPR036597 Fido-like domain superfamily JO41_05670 7361b68ac71005e40debc5cf948f64ac 297 Pfam PF02661 Fic/DOC family 144 238 1.1E-13 T 14-10-2018 IPR003812 Fido domain JO41_06380 0f49584144eb972cece7f9f32655a4e8 350 SUPERFAMILY SSF100950 9 338 1.34E-77 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_06380 0f49584144eb972cece7f9f32655a4e8 350 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 333 9.0E-58 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 JO41_06380 0f49584144eb972cece7f9f32655a4e8 350 Gene3D G3DSA:1.20.120.420 48 144 7.6E-73 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 JO41_06380 0f49584144eb972cece7f9f32655a4e8 350 Gene3D G3DSA:3.40.50.10470 145 333 7.6E-73 T 14-10-2018 JO41_06380 0f49584144eb972cece7f9f32655a4e8 350 Pfam PF01008 Initiation factor 2 subunit family 68 333 5.0E-42 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 2.4E-57 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 31.324 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.5E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.5E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.5E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.5E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.5E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 SUPERFAMILY SSF52374 1 156 7.6E-41 T 14-10-2018 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 Pfam PF01467 Cytidylyltransferase-like 5 132 2.5E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 58 3.8E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JO41_05810 5be86a1d3788efd02a3ed3c7ece639e2 161 Gene3D G3DSA:3.40.50.620 1 158 3.2E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_00680 89cbfe63bac22087ec21897ddaef160c 91 Gene3D G3DSA:3.40.630.30 1 91 7.7E-33 T 14-10-2018 JO41_00680 89cbfe63bac22087ec21897ddaef160c 91 Pfam PF14542 GCN5-related N-acetyl-transferase 10 88 3.3E-27 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase JO41_00680 89cbfe63bac22087ec21897ddaef160c 91 SUPERFAMILY SSF55729 6 90 1.51E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_08450 32a5a495d21880b2ade1b036a6ad1001 208 Pfam PF02517 CAAX protease self-immunity 49 195 2.5E-8 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO41_02945 ad20e1abc0269c6584d59149b5832cc7 363 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 37 356 1.8E-61 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 JO41_02945 ad20e1abc0269c6584d59149b5832cc7 363 Gene3D G3DSA:3.40.50.2300 39 319 9.5E-97 T 14-10-2018 JO41_02945 ad20e1abc0269c6584d59149b5832cc7 363 SUPERFAMILY SSF53822 49 304 4.21E-16 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO41_02945 ad20e1abc0269c6584d59149b5832cc7 363 Gene3D G3DSA:3.40.50.2300 149 352 9.5E-97 T 14-10-2018 JO41_08005 040e0af70bb9837c1aa5c907e60f6edf 1029 Pfam PF13086 AAA domain 337 650 1.0E-24 T 14-10-2018 JO41_08005 040e0af70bb9837c1aa5c907e60f6edf 1029 Pfam PF13087 AAA domain 678 848 2.5E-24 T 14-10-2018 JO41_08005 040e0af70bb9837c1aa5c907e60f6edf 1029 Gene3D G3DSA:3.40.50.300 697 886 1.0E-32 T 14-10-2018 JO41_08005 040e0af70bb9837c1aa5c907e60f6edf 1029 Gene3D G3DSA:3.40.960.10 918 1021 2.3E-5 T 14-10-2018 JO41_08005 040e0af70bb9837c1aa5c907e60f6edf 1029 SUPERFAMILY SSF52540 334 853 5.02E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 TIGRFAM TIGR00492 alr: alanine racemase 3 371 8.4E-111 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 63 81 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 204 231 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 124 136 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 298 315 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 27 43 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 260 275 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 158 169 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 353 366 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 PRINTS PR00992 Alanine racemase signature 277 292 5.9E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 SUPERFAMILY SSF51419 8 245 3.71E-64 T 14-10-2018 IPR029066 PLP-binding barrel JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 Gene3D G3DSA:3.20.20.10 10 232 1.8E-73 T 14-10-2018 IPR029066 PLP-binding barrel JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 Pfam PF00842 Alanine racemase, C-terminal domain 244 369 4.0E-44 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 Hamap MF_01201 Alanine racemase. 1 371 32.894 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 SMART SM01005 244 371 4.0E-64 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 Gene3D G3DSA:2.40.37.10 233 375 2.0E-50 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 Pfam PF01168 Alanine racemase, N-terminal domain 8 231 4.4E-67 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JO41_09655 cb51da35f66f69fa688bbcb092cb2bf1 375 SUPERFAMILY SSF50621 238 373 1.33E-46 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JO41_11370 c8a7d3485e585b09d6c1f5e092cb7dd4 312 Pfam PF03547 Membrane transport protein 7 139 1.9E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 JO41_11370 c8a7d3485e585b09d6c1f5e092cb7dd4 312 Pfam PF03547 Membrane transport protein 159 299 2.5E-16 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 JO41_11370 c8a7d3485e585b09d6c1f5e092cb7dd4 312 Gene3D G3DSA:1.20.1530.20 153 310 5.9E-6 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 SUPERFAMILY SSF52540 633 926 3.22E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 Gene3D G3DSA:3.40.50.300 626 947 6.7E-140 T 14-10-2018 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 Gene3D G3DSA:1.20.1580.10 705 842 6.7E-140 T 14-10-2018 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 Gene3D G3DSA:3.40.50.300 16 608 1.6E-245 T 14-10-2018 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 Hamap MF_00205 UvrABC system protein A [uvrA]. 12 952 22.752 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 Gene3D G3DSA:1.10.8.280 300 417 1.6E-245 T 14-10-2018 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 SUPERFAMILY SSF52540 21 583 1.81E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 Gene3D G3DSA:1.20.1580.10 101 506 1.6E-245 T 14-10-2018 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 14 937 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 JO41_11335 331ba183c30842b0b4664cd8dffdee20 960 Gene3D G3DSA:3.30.190.20 141 257 1.6E-245 T 14-10-2018 JO41_01665 88b5ccd79c6f4eb2f90225fb382a5c17 289 SUPERFAMILY SSF53474 24 289 4.4E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_01665 88b5ccd79c6f4eb2f90225fb382a5c17 289 Pfam PF00326 Prolyl oligopeptidase family 113 287 9.4E-17 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JO41_01665 88b5ccd79c6f4eb2f90225fb382a5c17 289 Gene3D G3DSA:3.40.50.1820 11 289 1.2E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_09310 199cd629d39db0e290f55c5c696fc83c 162 SUPERFAMILY SSF55729 1 160 1.26E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_09310 199cd629d39db0e290f55c5c696fc83c 162 Pfam PF13302 Acetyltransferase (GNAT) domain 47 136 1.2E-11 T 14-10-2018 IPR000182 GNAT domain JO41_09310 199cd629d39db0e290f55c5c696fc83c 162 Gene3D G3DSA:3.40.630.30 5 162 2.5E-28 T 14-10-2018 JO41_04405 a9ecd82a037c0ad1ff56d4c5a7ff6c4b 132 Pfam PF00410 Ribosomal protein S8 5 132 7.5E-48 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04405 a9ecd82a037c0ad1ff56d4c5a7ff6c4b 132 Gene3D G3DSA:3.30.1490.10 78 132 4.5E-22 T 14-10-2018 JO41_04405 a9ecd82a037c0ad1ff56d4c5a7ff6c4b 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.968 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04405 a9ecd82a037c0ad1ff56d4c5a7ff6c4b 132 Gene3D G3DSA:3.30.1370.30 4 77 8.8E-28 T 14-10-2018 JO41_04405 a9ecd82a037c0ad1ff56d4c5a7ff6c4b 132 SUPERFAMILY SSF56047 3 132 7.72E-43 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 SMART SM00138 7 269 2.3E-93 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 264 1.3E-64 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JO41_10110 4cde2df54e98b17e046ec2314823e324 272 Gene3D G3DSA:3.40.50.150 72 270 9.7E-60 T 14-10-2018 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 SUPERFAMILY SSF47757 5 72 6.28E-15 T 14-10-2018 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 60 1.7E-13 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JO41_10110 4cde2df54e98b17e046ec2314823e324 272 PIRSF PIRSF000410 2 270 3.9E-78 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR JO41_10110 4cde2df54e98b17e046ec2314823e324 272 SUPERFAMILY SSF53335 73 264 2.94E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_10110 4cde2df54e98b17e046ec2314823e324 272 Gene3D G3DSA:1.10.155.10 2 71 2.6E-14 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily JO41_10110 4cde2df54e98b17e046ec2314823e324 272 PRINTS PR00996 Glutamate methyltransferase family signature 29 42 1.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 1.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 1.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 1.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 1.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_10110 4cde2df54e98b17e046ec2314823e324 272 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 1.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JO41_09070 d659c9a9485f230548ebf95376b202df 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 32.111 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 JO41_09070 d659c9a9485f230548ebf95376b202df 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 12 149 5.3E-54 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 JO41_09070 d659c9a9485f230548ebf95376b202df 151 Gene3D G3DSA:2.70.40.10 6 149 1.2E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily JO41_09070 d659c9a9485f230548ebf95376b202df 151 Pfam PF00692 dUTPase 20 149 3.5E-29 T 14-10-2018 IPR029054 dUTPase-like JO41_09070 d659c9a9485f230548ebf95376b202df 151 SUPERFAMILY SSF51283 10 150 4.84E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily JO41_09090 0486b9597c067398ada8f2025223b933 241 Pfam PF03471 Transporter associated domain 159 239 4.1E-16 T 14-10-2018 IPR005170 Transporter-associated domain JO41_09090 0486b9597c067398ada8f2025223b933 241 Pfam PF00571 CBS domain 94 142 6.4E-7 T 14-10-2018 IPR000644 CBS domain JO41_09090 0486b9597c067398ada8f2025223b933 241 Gene3D G3DSA:3.30.465.10 152 239 6.4E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO41_09090 0486b9597c067398ada8f2025223b933 241 SUPERFAMILY SSF56176 159 238 1.28E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_09090 0486b9597c067398ada8f2025223b933 241 Gene3D G3DSA:3.10.580.10 17 151 3.5E-28 T 14-10-2018 JO41_09090 0486b9597c067398ada8f2025223b933 241 SUPERFAMILY SSF54631 20 143 3.28E-20 T 14-10-2018 JO41_09090 0486b9597c067398ada8f2025223b933 241 SMART SM01091 158 240 1.3E-16 T 14-10-2018 IPR005170 Transporter-associated domain JO41_09530 8ca4fd2220a22809950bb792b332a308 618 SMART SM00955 238 515 2.4E-51 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JO41_09530 8ca4fd2220a22809950bb792b332a308 618 Pfam PF00773 RNB domain 240 452 1.2E-29 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JO41_09530 8ca4fd2220a22809950bb792b332a308 618 SUPERFAMILY SSF50249 559 617 1.56E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_09530 8ca4fd2220a22809950bb792b332a308 618 Pfam PF00773 RNB domain 468 513 6.6E-9 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JO41_09530 8ca4fd2220a22809950bb792b332a308 618 Gene3D G3DSA:1.10.10.10 159 230 8.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_09530 8ca4fd2220a22809950bb792b332a308 618 SUPERFAMILY SSF50249 189 557 9.71E-71 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_03110 2718b04d08f80f5a4b9d8eba2a530547 356 Gene3D G3DSA:3.40.50.2000 6 352 5.6E-120 T 14-10-2018 JO41_03110 2718b04d08f80f5a4b9d8eba2a530547 356 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 355 1.5E-94 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 JO41_03110 2718b04d08f80f5a4b9d8eba2a530547 356 Gene3D G3DSA:3.40.50.2000 194 342 5.6E-120 T 14-10-2018 JO41_03110 2718b04d08f80f5a4b9d8eba2a530547 356 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 31 355 2.4E-111 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JO41_03110 2718b04d08f80f5a4b9d8eba2a530547 356 SUPERFAMILY SSF53756 1 355 1.97E-105 T 14-10-2018 JO41_10195 7945599d79923a9097b162b867348b97 209 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 205 9.0E-77 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO41_10195 7945599d79923a9097b162b867348b97 209 Gene3D G3DSA:3.20.20.70 2 209 3.0E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_10195 7945599d79923a9097b162b867348b97 209 PIRSF PIRSF001461 1 209 6.7E-87 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO41_10195 7945599d79923a9097b162b867348b97 209 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO41_10195 7945599d79923a9097b162b867348b97 209 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO41_10195 7945599d79923a9097b162b867348b97 209 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 203 3.6E-73 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JO41_10195 7945599d79923a9097b162b867348b97 209 SUPERFAMILY SSF51366 5 205 4.58E-63 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JO41_12250 bb34427c1bcbbb152b6dd95b0822cfa6 403 Pfam PF13173 AAA domain 22 150 3.1E-34 T 14-10-2018 JO41_12250 bb34427c1bcbbb152b6dd95b0822cfa6 403 SUPERFAMILY SSF52540 6 206 2.58E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12250 bb34427c1bcbbb152b6dd95b0822cfa6 403 Pfam PF13635 Domain of unknown function (DUF4143) 201 348 9.1E-10 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 JO41_12250 bb34427c1bcbbb152b6dd95b0822cfa6 403 Gene3D G3DSA:3.40.50.300 4 84 3.1E-6 T 14-10-2018 JO41_05675 372ed15d78d7d7d2d875e606be429342 377 Gene3D G3DSA:1.10.8.60 311 376 6.0E-15 T 14-10-2018 JO41_05675 372ed15d78d7d7d2d875e606be429342 377 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JO41_05675 372ed15d78d7d7d2d875e606be429342 377 Pfam PF00158 Sigma-54 interaction domain 142 305 3.5E-55 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JO41_05675 372ed15d78d7d7d2d875e606be429342 377 SUPERFAMILY SSF52540 141 367 1.32E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05675 372ed15d78d7d7d2d875e606be429342 377 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JO41_05675 372ed15d78d7d7d2d875e606be429342 377 SUPERFAMILY SSF52172 27 186 9.94E-6 T 14-10-2018 IPR011006 CheY-like superfamily JO41_05675 372ed15d78d7d7d2d875e606be429342 377 SMART SM00382 161 303 1.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_05675 372ed15d78d7d7d2d875e606be429342 377 Gene3D G3DSA:3.40.50.300 134 310 5.0E-55 T 14-10-2018 JO41_08740 4cfd62baeb2693a7b067c620f24eaaa3 390 Gene3D G3DSA:3.40.50.300 33 210 2.5E-5 T 14-10-2018 JO41_08740 4cfd62baeb2693a7b067c620f24eaaa3 390 SUPERFAMILY SSF52540 39 203 5.83E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 Pfam PF00334 Nucleoside diphosphate kinase 2 135 1.1E-53 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 34.278 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.9E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.9E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.9E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.9E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.9E-42 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 Gene3D G3DSA:3.30.70.141 1 147 2.1E-58 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 SMART SM00562 1 138 3.8E-77 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_03400 2e39163f90a55672f34ff677aa0b3947 147 SUPERFAMILY SSF54919 1 145 1.11E-56 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JO41_00500 10bbdcc320cca65c4aa6098a6b66594c 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 4 154 1.9E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JO41_00500 10bbdcc320cca65c4aa6098a6b66594c 156 SUPERFAMILY SSF55826 4 154 7.46E-40 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO41_00500 10bbdcc320cca65c4aa6098a6b66594c 156 Pfam PF04073 Aminoacyl-tRNA editing domain 31 144 3.1E-23 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JO41_00500 10bbdcc320cca65c4aa6098a6b66594c 156 Gene3D G3DSA:3.90.960.10 1 155 7.4E-48 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JO41_00500 10bbdcc320cca65c4aa6098a6b66594c 156 PIRSF PIRSF006181 1 156 8.2E-55 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JO41_04120 eb517eca65315404faa67a0854e44d39 284 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 262 4.1E-28 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_12010 52d54b9068fd854f9f852da6b0e61422 94 SUPERFAMILY SSF117916 2 73 2.62E-21 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JO41_12010 52d54b9068fd854f9f852da6b0e61422 94 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 13 71 6.0E-11 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JO41_12010 52d54b9068fd854f9f852da6b0e61422 94 Pfam PF01106 NifU-like domain 6 69 3.9E-22 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JO41_12010 52d54b9068fd854f9f852da6b0e61422 94 Gene3D G3DSA:3.30.300.130 1 71 9.4E-23 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JO41_12590 a4bf1f36e1bca3ab3e557194936f048a 490 SMART SM00331 269 488 3.3E-32 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_12590 a4bf1f36e1bca3ab3e557194936f048a 490 Gene3D G3DSA:3.60.40.10 242 488 9.7E-43 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_12590 a4bf1f36e1bca3ab3e557194936f048a 490 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 296 488 4.1E-24 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_06510 7a3b03a2a1b9674fa47c180ff87f19d8 153 Pfam PF12821 Threonine/Serine exporter, ThrE 7 134 6.7E-36 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE JO41_09715 6a1adf2831770651acbc18f62f1bcec6 165 SUPERFAMILY SSF55729 1 152 1.72E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_09715 6a1adf2831770651acbc18f62f1bcec6 165 Gene3D G3DSA:3.40.630.30 1 161 1.2E-24 T 14-10-2018 JO41_09715 6a1adf2831770651acbc18f62f1bcec6 165 Pfam PF00583 Acetyltransferase (GNAT) family 59 140 6.4E-11 T 14-10-2018 IPR000182 GNAT domain JO41_07495 bf43a8dbebb73859b35db98fdef8d70b 400 SUPERFAMILY SSF144010 8 399 4.45E-43 T 14-10-2018 JO41_07495 bf43a8dbebb73859b35db98fdef8d70b 400 Pfam PF01996 F420-0:Gamma-glutamyl ligase 12 393 4.0E-79 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 JO41_07495 bf43a8dbebb73859b35db98fdef8d70b 400 Gene3D G3DSA:3.30.1330.100 11 105 8.0E-8 T 14-10-2018 JO41_08895 c93e320ac2ada9660550634a7521bc96 379 Gene3D G3DSA:3.40.50.1980 32 376 1.7E-83 T 14-10-2018 JO41_08895 c93e320ac2ada9660550634a7521bc96 379 Pfam PF01497 Periplasmic binding protein 62 308 6.0E-18 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JO41_08895 c93e320ac2ada9660550634a7521bc96 379 SUPERFAMILY SSF53807 46 370 1.37E-53 T 14-10-2018 JO41_08080 46fe66efa1b0d49de8eb46cb59e642ce 362 Pfam PF03781 Sulfatase-modifying factor enzyme 1 93 358 2.3E-37 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO41_08080 46fe66efa1b0d49de8eb46cb59e642ce 362 Gene3D G3DSA:3.90.1580.10 82 362 8.5E-71 T 14-10-2018 JO41_08080 46fe66efa1b0d49de8eb46cb59e642ce 362 SUPERFAMILY SSF56436 92 358 5.18E-47 T 14-10-2018 IPR016187 C-type lectin fold JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Gene3D G3DSA:3.30.420.40 477 620 2.1E-79 T 14-10-2018 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Gene3D G3DSA:3.30.420.40 9 264 1.7E-67 T 14-10-2018 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 SUPERFAMILY SSF53067 9 262 1.25E-50 T 14-10-2018 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 SUPERFAMILY SSF53067 382 637 9.39E-48 T 14-10-2018 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Gene3D G3DSA:3.30.420.40 105 249 1.7E-67 T 14-10-2018 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 758 979 3.0E-75 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 264 1.0E-21 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 383 637 6.9E-35 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 994 1312 4.0E-51 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit JO41_01380 958558e786a0da51425eb16c8baf88e4 1505 Gene3D G3DSA:3.30.420.40 383 637 2.1E-79 T 14-10-2018 JO41_07535 ef8595b8ecc227eb8a650ae530fca790 795 SMART SM00028 472 505 0.47 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_07535 ef8595b8ecc227eb8a650ae530fca790 795 SMART SM00028 552 585 3.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_07535 ef8595b8ecc227eb8a650ae530fca790 795 SUPERFAMILY SSF48452 432 589 4.68E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 SUPERFAMILY SSF90123 3 318 1.96E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 Gene3D G3DSA:3.40.50.300 324 576 5.4E-75 T 14-10-2018 JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 SUPERFAMILY SSF52540 328 565 1.62E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 Pfam PF00664 ABC transporter transmembrane region 26 286 1.6E-27 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 Gene3D G3DSA:1.20.1560.10 2 320 2.4E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 Pfam PF00005 ABC transporter 347 495 2.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10970 29e3fed5f4b4018041256b47230e0dec 584 SMART SM00382 356 547 4.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_01710 e76d8e686fba81382e87a41a6cf7c48e 345 PIRSF PIRSF001555 8 345 3.3E-143 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 JO41_01710 e76d8e686fba81382e87a41a6cf7c48e 345 Pfam PF03590 Aspartate-ammonia ligase 20 255 8.7E-100 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 JO41_01710 e76d8e686fba81382e87a41a6cf7c48e 345 SUPERFAMILY SSF55681 18 337 3.83E-93 T 14-10-2018 JO41_01710 e76d8e686fba81382e87a41a6cf7c48e 345 Gene3D G3DSA:3.30.930.10 15 339 3.5E-141 T 14-10-2018 JO41_01710 e76d8e686fba81382e87a41a6cf7c48e 345 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 12 341 46.447 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 JO41_01710 e76d8e686fba81382e87a41a6cf7c48e 345 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 20 336 1.6E-114 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 JO41_03650 d29aac1ef156644a1c95451b785a3fc6 434 Pfam PF03553 Na+/H+ antiporter family 149 419 1.0E-11 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JO41_00280 591cc530374cb525d7a172f43d70f0fa 157 Pfam PF08905 Domain of unknown function (DUF1850) 52 135 5.6E-15 T 14-10-2018 IPR015001 Protein of unknown function DUF1850 JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 Gene3D G3DSA:3.40.50.300 329 581 4.7E-83 T 14-10-2018 JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 Pfam PF00664 ABC transporter transmembrane region 61 296 1.6E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 SUPERFAMILY SSF52540 337 577 1.55E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 Pfam PF00005 ABC transporter 355 506 2.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 SUPERFAMILY SSF90123 8 324 2.49E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 SMART SM00382 364 552 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 Gene3D G3DSA:1.20.1560.10 2 328 8.6E-27 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_10410 f9598c01621ba4fa377fcee571ed5b32 584 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11695 79a96671361e68b00cf2f1862bcf311f 230 Pfam PF04536 TPM domain 119 205 1.3E-6 T 14-10-2018 IPR007621 TPM domain JO41_11695 79a96671361e68b00cf2f1862bcf311f 230 Gene3D G3DSA:3.10.310.50 111 226 2.9E-34 T 14-10-2018 JO41_07655 5b43d440e48103791a98c55798095cc5 709 Gene3D G3DSA:3.40.50.300 37 313 4.8E-41 T 14-10-2018 JO41_07655 5b43d440e48103791a98c55798095cc5 709 Gene3D G3DSA:3.40.50.300 507 703 1.2E-36 T 14-10-2018 JO41_07655 5b43d440e48103791a98c55798095cc5 709 SUPERFAMILY SSF52540 55 671 2.61E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07655 5b43d440e48103791a98c55798095cc5 709 SMART SM00488 32 307 0.0088 T 14-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 JO41_07655 5b43d440e48103791a98c55798095cc5 709 Pfam PF13307 Helicase C-terminal domain 530 689 3.7E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JO41_07655 5b43d440e48103791a98c55798095cc5 709 SMART SM00491 546 676 1.5E-24 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JO41_05170 6d526956ce9f23bb47c5290069d390a9 332 SMART SM00327 89 267 8.2E-17 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_05170 6d526956ce9f23bb47c5290069d390a9 332 SUPERFAMILY SSF53300 91 290 8.16E-32 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_05170 6d526956ce9f23bb47c5290069d390a9 332 Gene3D G3DSA:3.40.50.410 91 288 7.3E-42 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_05170 6d526956ce9f23bb47c5290069d390a9 332 Pfam PF00092 von Willebrand factor type A domain 92 284 5.0E-23 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_10160 9e5defb401d0f569f495907feab58fa4 558 SUPERFAMILY SSF81296 136 234 3.92E-5 T 14-10-2018 IPR014756 Immunoglobulin E-set JO41_10160 9e5defb401d0f569f495907feab58fa4 558 Gene3D G3DSA:2.60.40.10 40 119 6.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_10160 9e5defb401d0f569f495907feab58fa4 558 Gene3D G3DSA:2.60.40.10 137 239 1.3E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_10160 9e5defb401d0f569f495907feab58fa4 558 Pfam PF01833 IPT/TIG domain 138 237 2.4E-4 T 14-10-2018 IPR002909 IPT domain JO41_10160 9e5defb401d0f569f495907feab58fa4 558 Pfam PF01833 IPT/TIG domain 41 112 1.7E-5 T 14-10-2018 IPR002909 IPT domain JO41_10160 9e5defb401d0f569f495907feab58fa4 558 Gene3D G3DSA:3.10.620.30 319 489 3.2E-20 T 14-10-2018 JO41_10160 9e5defb401d0f569f495907feab58fa4 558 SUPERFAMILY SSF81296 41 111 3.27E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set JO41_10160 9e5defb401d0f569f495907feab58fa4 558 SUPERFAMILY SSF54001 360 508 7.29E-23 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO41_10160 9e5defb401d0f569f495907feab58fa4 558 SMART SM00460 416 478 1.1E-10 T 14-10-2018 IPR002931 Transglutaminase-like JO41_10160 9e5defb401d0f569f495907feab58fa4 558 Pfam PF01841 Transglutaminase-like superfamily 372 476 7.1E-20 T 14-10-2018 IPR002931 Transglutaminase-like JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 1.6E-30 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 SUPERFAMILY SSF55979 127 244 9.42E-23 T 14-10-2018 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 Gene3D G3DSA:3.70.10.10 138 364 1.0E-108 T 14-10-2018 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 SMART SM00480 17 362 5.9E-113 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 3.2E-104 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 SUPERFAMILY SSF55979 1 118 1.7E-15 T 14-10-2018 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 PIRSF PIRSF000804 1 367 7.6E-113 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 SUPERFAMILY SSF55979 245 365 1.52E-33 T 14-10-2018 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 8.8E-27 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 Gene3D G3DSA:3.10.150.10 1 242 1.0E-108 T 14-10-2018 JO41_05415 87a15809f0fe416a618e4d4467cf3d1e 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 7.1E-20 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JO41_05225 3b961bc2d1e83e923e5cc8dc53be9b8a 393 Pfam PF13439 Glycosyltransferase Family 4 14 181 2.8E-28 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JO41_05225 3b961bc2d1e83e923e5cc8dc53be9b8a 393 Gene3D G3DSA:3.40.50.2000 1 203 4.1E-34 T 14-10-2018 JO41_05225 3b961bc2d1e83e923e5cc8dc53be9b8a 393 Pfam PF00534 Glycosyl transferases group 1 198 350 2.3E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO41_05225 3b961bc2d1e83e923e5cc8dc53be9b8a 393 SUPERFAMILY SSF53756 2 388 9.42E-71 T 14-10-2018 JO41_05225 3b961bc2d1e83e923e5cc8dc53be9b8a 393 Gene3D G3DSA:3.40.50.2000 204 388 3.3E-32 T 14-10-2018 JO41_03250 f381e9eded84ef44fc99f8f4322dfe5a 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 300 2.0E-81 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain JO41_03250 f381e9eded84ef44fc99f8f4322dfe5a 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 10 20 - T 14-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 JO41_03250 f381e9eded84ef44fc99f8f4322dfe5a 311 Gene3D G3DSA:3.90.245.10 1 311 1.6E-110 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like JO41_03250 f381e9eded84ef44fc99f8f4322dfe5a 311 SUPERFAMILY SSF53590 4 306 2.09E-94 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like JO41_00410 4ee6a26d66d709f1b681f036b65c6b04 525 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 519 2.2E-123 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 JO41_00410 4ee6a26d66d709f1b681f036b65c6b04 525 Pfam PF02652 L-lactate permease 5 519 1.2E-127 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 JO41_07150 3d8c64f93ad65b3dad05093c6d4503f0 475 SUPERFAMILY SSF51690 134 472 4.12E-111 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 JO41_07150 3d8c64f93ad65b3dad05093c6d4503f0 475 Gene3D G3DSA:3.20.140.10 6 465 4.4E-181 T 14-10-2018 JO41_07150 3d8c64f93ad65b3dad05093c6d4503f0 475 PIRSF PIRSF000484 1 474 1.2E-155 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 JO41_07150 3d8c64f93ad65b3dad05093c6d4503f0 475 SUPERFAMILY SSF54675 2 133 3.06E-47 T 14-10-2018 JO41_07150 3d8c64f93ad65b3dad05093c6d4503f0 475 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 150 263 6.1E-6 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 JO41_07150 3d8c64f93ad65b3dad05093c6d4503f0 475 Gene3D G3DSA:3.20.20.70 146 314 4.4E-181 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_07150 3d8c64f93ad65b3dad05093c6d4503f0 475 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 461 3.6E-186 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 Pfam PF01019 Gamma-glutamyltranspeptidase 33 542 2.8E-146 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 22 536 1.7E-128 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 SUPERFAMILY SSF56235 9 546 2.12E-150 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 Gene3D G3DSA:3.60.20.40 358 547 2.9E-53 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 423 438 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 447 464 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 260 279 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 382 400 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 131 150 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 131 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 40 65 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 231 247 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 358 376 2.6E-61 T 14-10-2018 JO41_01015 ad7f4de172df322b5c422955cdf6fca1 564 Gene3D G3DSA:1.10.246.130 247 354 3.7E-33 T 14-10-2018 JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 SUPERFAMILY SSF52540 385 629 7.17E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 Gene3D G3DSA:1.20.1560.10 2 351 1.6E-93 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 SUPERFAMILY SSF90123 19 348 9.94E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 SMART SM00382 421 613 2.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 Gene3D G3DSA:3.40.50.300 392 633 1.8E-82 T 14-10-2018 JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 Pfam PF00664 ABC transporter transmembrane region 33 304 1.8E-52 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 ProSitePatterns PS00211 ABC transporters family signature. 533 547 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_04970 5259c67328b169cbacb7dfe3afceb838 636 Pfam PF00005 ABC transporter 412 561 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11675 71fac0b64157538489768268245356e6 345 Pfam PF01032 FecCD transport family 22 343 9.7E-85 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JO41_11675 71fac0b64157538489768268245356e6 345 SUPERFAMILY SSF81345 10 343 1.44E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_11675 71fac0b64157538489768268245356e6 345 Gene3D G3DSA:1.10.3470.10 8 345 8.4E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 216 6.5E-79 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 4.7E-40 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 4.7E-40 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 4.7E-40 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 4.7E-40 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 Gene3D G3DSA:3.40.630.20 1 217 6.1E-76 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 SUPERFAMILY SSF53182 1 216 1.27E-68 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 Pfam PF01470 Pyroglutamyl peptidase 1 204 1.3E-84 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 203 38.879 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 JO41_08845 0f63703b7758dae3aeae20b23bff7a49 217 PIRSF PIRSF015592 1 215 1.1E-80 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 JO41_00815 d588aea7216c0e5c8d624f236d8aad9d 194 SUPERFAMILY SSF53335 56 185 3.03E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_00815 d588aea7216c0e5c8d624f236d8aad9d 194 Pfam PF13847 Methyltransferase domain 69 189 1.3E-29 T 14-10-2018 IPR025714 Methyltransferase domain JO41_00815 d588aea7216c0e5c8d624f236d8aad9d 194 Gene3D G3DSA:3.40.50.150 59 193 2.0E-36 T 14-10-2018 JO41_11470 7f351a497ac8e36d6ef49a7192ff3691 248 SUPERFAMILY SSF52540 3 244 8.75E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11470 7f351a497ac8e36d6ef49a7192ff3691 248 Pfam PF00005 ABC transporter 24 191 3.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11470 7f351a497ac8e36d6ef49a7192ff3691 248 SMART SM00382 32 239 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11470 7f351a497ac8e36d6ef49a7192ff3691 248 Gene3D G3DSA:3.40.50.300 1 247 1.5E-60 T 14-10-2018 JO41_11470 7f351a497ac8e36d6ef49a7192ff3691 248 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_08725 03b7c1ab4410aab15818ba1d95c0250a 93 Pfam PF13711 Domain of unknown function (DUF4160) 11 81 1.9E-8 T 14-10-2018 IPR025427 Protein of unknown function DUF4160 JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 SUPERFAMILY SSF54106 326 371 1.57E-9 T 14-10-2018 JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 SMART SM00257 393 437 3.3E-13 T 14-10-2018 IPR018392 LysM domain JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 SMART SM00257 327 371 1.9E-13 T 14-10-2018 IPR018392 LysM domain JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 SUPERFAMILY SSF54106 393 437 4.71E-10 T 14-10-2018 JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 Pfam PF01476 LysM domain 328 371 4.7E-12 T 14-10-2018 IPR018392 LysM domain JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 Pfam PF01476 LysM domain 394 437 1.9E-11 T 14-10-2018 IPR018392 LysM domain JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 Gene3D G3DSA:1.10.530.10 88 249 1.9E-26 T 14-10-2018 JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 Gene3D G3DSA:3.10.350.10 326 371 2.5E-14 T 14-10-2018 IPR036779 LysM domain superfamily JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 Gene3D G3DSA:3.10.350.10 377 439 4.8E-15 T 14-10-2018 IPR036779 LysM domain superfamily JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 SUPERFAMILY SSF53955 97 247 1.37E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO41_10600 5e699ddc1c88179355e189031a1f59a6 439 Pfam PF01464 Transglycosylase SLT domain 108 211 6.4E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JO41_04330 4efed85b49f1b6dd1ef751fcf6bb8cb5 279 Gene3D G3DSA:3.40.50.150 86 268 1.1E-42 T 14-10-2018 JO41_04330 4efed85b49f1b6dd1ef751fcf6bb8cb5 279 Pfam PF01728 FtsJ-like methyltransferase 94 203 3.5E-8 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JO41_04330 4efed85b49f1b6dd1ef751fcf6bb8cb5 279 SUPERFAMILY SSF53335 93 243 3.77E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 SUPERFAMILY SSF52540 71 359 1.1E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 Gene3D G3DSA:3.40.50.300 212 387 7.0E-50 T 14-10-2018 JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 Pfam PF00270 DEAD/DEAH box helicase 25 195 2.8E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 SMART SM00490 257 338 8.8E-30 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 Gene3D G3DSA:3.40.50.300 1 208 6.0E-67 T 14-10-2018 JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 SMART SM00487 20 221 2.2E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_07925 0fdce12636cc9b099e3ad538db4556f9 595 Pfam PF00271 Helicase conserved C-terminal domain 230 338 2.5E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_12570 9971a2679aab5e76ea2bd46f0c369ddd 254 SUPERFAMILY SSF55166 97 232 2.62E-29 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JO41_12570 9971a2679aab5e76ea2bd46f0c369ddd 254 Gene3D G3DSA:3.30.1380.10 40 244 3.7E-56 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JO41_12570 9971a2679aab5e76ea2bd46f0c369ddd 254 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 103 224 9.3E-37 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 SUPERFAMILY SSF56053 83 178 2.82E-32 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 SUPERFAMILY SSF56053 2 82 2.64E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 Gene3D G3DSA:3.90.930.12 83 180 1.7E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 35.806 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 PIRSF PIRSF002162 1 178 5.6E-47 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 Gene3D G3DSA:3.90.930.12 1 82 5.3E-29 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 6.3E-70 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.2E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 PRINTS PR00059 Ribosomal protein L6 signature 142 163 7.2E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.2E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 Pfam PF00347 Ribosomal protein L6 91 165 3.4E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04400 9ce76b09daa21f023784a66caed65abb 180 Pfam PF00347 Ribosomal protein L6 11 82 3.5E-17 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_02525 88222d0bdc9b4456ce2ec8a2460c9692 298 Pfam PF00924 Mechanosensitive ion channel 64 260 3.2E-53 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JO41_02525 88222d0bdc9b4456ce2ec8a2460c9692 298 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 135 169 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 JO41_02525 88222d0bdc9b4456ce2ec8a2460c9692 298 SUPERFAMILY SSF82861 22 104 2.62E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 JO41_02525 88222d0bdc9b4456ce2ec8a2460c9692 298 Gene3D G3DSA:2.30.30.60 122 170 2.0E-14 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily JO41_02525 88222d0bdc9b4456ce2ec8a2460c9692 298 Gene3D G3DSA:3.30.70.100 172 265 2.1E-23 T 14-10-2018 JO41_02525 88222d0bdc9b4456ce2ec8a2460c9692 298 SUPERFAMILY SSF50182 106 171 5.56E-16 T 14-10-2018 IPR010920 LSM domain superfamily JO41_02525 88222d0bdc9b4456ce2ec8a2460c9692 298 SUPERFAMILY SSF82689 173 271 3.53E-26 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JO41_11795 62ba35d4ddaf5213c3ced433afe2908c 418 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 197 3.6E-50 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JO41_11795 62ba35d4ddaf5213c3ced433afe2908c 418 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 302 417 2.4E-19 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JO41_11795 62ba35d4ddaf5213c3ced433afe2908c 418 SUPERFAMILY SSF52540 7 230 6.86E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11795 62ba35d4ddaf5213c3ced433afe2908c 418 SMART SM00833 302 417 9.8E-29 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JO41_11795 62ba35d4ddaf5213c3ced433afe2908c 418 SUPERFAMILY SSF90002 302 417 1.57E-12 T 14-10-2018 JO41_11795 62ba35d4ddaf5213c3ced433afe2908c 418 Gene3D G3DSA:3.40.50.300 5 216 2.6E-61 T 14-10-2018 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 Gene3D G3DSA:1.10.150.20 173 232 9.0E-12 T 14-10-2018 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 SUPERFAMILY SSF56672 6 231 1.42E-76 T 14-10-2018 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 Gene3D G3DSA:2.30.40.20 14 70 2.1E-29 T 14-10-2018 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 Hamap MF_01113 DNA polymerase IV [dinB]. 4 350 32.095 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 340 3.2E-11 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 Pfam PF00817 impB/mucB/samB family 10 155 3.3E-48 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 SUPERFAMILY SSF100879 245 346 2.16E-19 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 Gene3D G3DSA:3.30.1490.100 239 351 1.2E-21 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JO41_06125 f95a943b4b8a77a1f00a7a6cc8ac7029 388 Gene3D G3DSA:3.30.70.270 71 172 1.9E-28 T 14-10-2018 JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 Gene3D G3DSA:3.40.50.300 322 571 2.2E-93 T 14-10-2018 JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 Pfam PF00005 ABC transporter 348 497 4.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 Gene3D G3DSA:1.20.1560.10 1 313 9.9E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 SMART SM00382 357 543 1.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 Pfam PF00664 ABC transporter transmembrane region 19 285 4.1E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 SUPERFAMILY SSF52540 320 567 7.01E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11625 43ecec1c4b60be07d2314d99022850b4 571 SUPERFAMILY SSF90123 4 314 9.68E-71 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 SMART SM00044 367 568 8.0E-34 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 Gene3D G3DSA:3.30.450.20 183 300 2.2E-5 T 14-10-2018 JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 398 580 7.1E-39 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 SUPERFAMILY SSF158472 320 368 3.53E-6 T 14-10-2018 JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 SMART SM00304 319 371 3.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 SUPERFAMILY SSF55073 395 585 5.97E-60 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 Gene3D G3DSA:3.30.70.1230 394 593 1.5E-69 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_00120 cac7aa37f6406f2306f05cccc0f251e9 634 Gene3D G3DSA:1.10.287.130 317 393 1.4E-6 T 14-10-2018 JO41_10625 26f099f8874125f4a49c3871b2685e23 213 Pfam PF00543 Nitrogen regulatory protein P-II 120 213 1.3E-7 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JO41_10625 26f099f8874125f4a49c3871b2685e23 213 SMART SM00938 119 213 7.9E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JO41_10625 26f099f8874125f4a49c3871b2685e23 213 Gene3D G3DSA:3.30.70.120 1 100 5.1E-7 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JO41_10625 26f099f8874125f4a49c3871b2685e23 213 Gene3D G3DSA:3.30.70.120 113 212 1.2E-17 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JO41_10625 26f099f8874125f4a49c3871b2685e23 213 SUPERFAMILY SSF54913 119 212 2.19E-19 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JO41_10625 26f099f8874125f4a49c3871b2685e23 213 SUPERFAMILY SSF54913 3 94 4.45E-7 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JO41_00470 b9310474ff89fa46c284bb5d6f8e70e0 372 Pfam PF13413 Helix-turn-helix domain 8 67 5.3E-21 T 14-10-2018 JO41_00470 b9310474ff89fa46c284bb5d6f8e70e0 372 Gene3D G3DSA:1.10.260.40 1 80 1.5E-23 T 14-10-2018 JO41_04300 2a0fd21a0b3ba44abd05f21eb8ae17a8 274 PIRSF PIRSF015601 1 267 2.1E-48 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JO41_04300 2a0fd21a0b3ba44abd05f21eb8ae17a8 274 SUPERFAMILY SSF88697 1 63 9.69E-5 T 14-10-2018 IPR015947 PUA-like superfamily JO41_04300 2a0fd21a0b3ba44abd05f21eb8ae17a8 274 Gene3D G3DSA:3.40.1280.10 1 272 1.2E-51 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_04300 2a0fd21a0b3ba44abd05f21eb8ae17a8 274 Pfam PF04452 RNA methyltransferase 17 261 4.7E-41 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JO41_04300 2a0fd21a0b3ba44abd05f21eb8ae17a8 274 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 98 263 1.2E-29 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JO41_04300 2a0fd21a0b3ba44abd05f21eb8ae17a8 274 SUPERFAMILY SSF75217 96 265 4.66E-32 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO41_08810 aa5f4cb6e67ea81053c6dc0ac2cc9bf6 266 Pfam PF01012 Electron transfer flavoprotein domain 27 206 1.3E-44 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JO41_08810 aa5f4cb6e67ea81053c6dc0ac2cc9bf6 266 SUPERFAMILY SSF52402 1 261 3.35E-76 T 14-10-2018 JO41_08810 aa5f4cb6e67ea81053c6dc0ac2cc9bf6 266 SMART SM00893 22 214 3.9E-55 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JO41_08810 aa5f4cb6e67ea81053c6dc0ac2cc9bf6 266 PIRSF PIRSF000090 1 266 5.8E-85 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 JO41_08810 aa5f4cb6e67ea81053c6dc0ac2cc9bf6 266 Gene3D G3DSA:3.40.50.620 1 265 2.0E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_12585 4c47069585319c635eba6407c5a5786f 709 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 516 707 5.3E-36 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_12585 4c47069585319c635eba6407c5a5786f 709 Gene3D G3DSA:3.60.40.10 486 709 1.4E-45 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_12585 4c47069585319c635eba6407c5a5786f 709 SMART SM00331 489 707 3.1E-49 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_12585 4c47069585319c635eba6407c5a5786f 709 SUPERFAMILY SSF81606 503 707 8.37E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JO41_04760 792e7fcf29de903c84e3af2173c14a74 194 Pfam PF12672 Protein of unknown function (DUF3793) 11 190 1.1E-49 T 14-10-2018 IPR024523 Protein of unknown function DUF3793 JO41_09850 5c38c1fce24ba5f91a2bd830f1fa2e73 288 Pfam PF01145 SPFH domain / Band 7 family 30 236 1.8E-6 T 14-10-2018 IPR001107 Band 7 domain JO41_11060 adeadbd57a80907447c63eac860e7ed5 580 Gene3D G3DSA:3.30.300.30 461 580 8.1E-5 T 14-10-2018 JO41_11060 adeadbd57a80907447c63eac860e7ed5 580 Pfam PF00501 AMP-binding enzyme 31 466 1.8E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO41_11060 adeadbd57a80907447c63eac860e7ed5 580 Gene3D G3DSA:3.40.50.12780 316 457 1.8E-41 T 14-10-2018 JO41_11060 adeadbd57a80907447c63eac860e7ed5 580 SUPERFAMILY SSF56801 16 576 2.75E-107 T 14-10-2018 JO41_11060 adeadbd57a80907447c63eac860e7ed5 580 Gene3D G3DSA:3.40.50.12780 18 301 1.8E-51 T 14-10-2018 JO41_01765 259df9536069752e099ceef55f12c378 427 Pfam PF12832 MFS_1 like family 17 398 1.6E-26 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain JO41_01765 259df9536069752e099ceef55f12c378 427 Gene3D G3DSA:1.20.1250.20 13 186 3.6E-13 T 14-10-2018 JO41_01765 259df9536069752e099ceef55f12c378 427 SUPERFAMILY SSF103473 8 180 8.5E-11 T 14-10-2018 IPR036259 MFS transporter superfamily JO41_01765 259df9536069752e099ceef55f12c378 427 SUPERFAMILY SSF103473 139 417 8.24E-25 T 14-10-2018 IPR036259 MFS transporter superfamily JO41_01765 259df9536069752e099ceef55f12c378 427 Gene3D G3DSA:1.20.1250.20 239 423 1.9E-27 T 14-10-2018 JO41_10720 7712bb5399a45d7c3e686c9cabb2afea 433 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 432 1.5E-122 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_10720 7712bb5399a45d7c3e686c9cabb2afea 433 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 433 26.376 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_10720 7712bb5399a45d7c3e686c9cabb2afea 433 Pfam PF01098 Cell cycle protein 230 430 7.7E-55 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_10720 7712bb5399a45d7c3e686c9cabb2afea 433 Pfam PF01098 Cell cycle protein 13 196 2.2E-33 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_10570 a760491e51313d46059b050c914ac04b 686 Gene3D G3DSA:3.30.365.10 3 603 4.6E-60 T 14-10-2018 JO41_10570 a760491e51313d46059b050c914ac04b 686 SUPERFAMILY SSF56003 126 684 2.09E-64 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 JO41_10570 a760491e51313d46059b050c914ac04b 686 SUPERFAMILY SSF54665 5 103 1.09E-12 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily JO41_10570 a760491e51313d46059b050c914ac04b 686 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 127 500 1.4E-37 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JO41_10570 a760491e51313d46059b050c914ac04b 686 SMART SM01008 3 103 3.6E-7 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JO41_12115 db79847ed13ad59c68dc42d19844ece4 254 SUPERFAMILY SSF52540 3 226 1.41E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12115 db79847ed13ad59c68dc42d19844ece4 254 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_12115 db79847ed13ad59c68dc42d19844ece4 254 Gene3D G3DSA:3.40.50.300 3 252 7.0E-64 T 14-10-2018 JO41_12115 db79847ed13ad59c68dc42d19844ece4 254 Pfam PF00005 ABC transporter 19 167 7.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_12115 db79847ed13ad59c68dc42d19844ece4 254 SMART SM00382 27 212 3.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_08260 8296b6fc6f7194001d15f4e180fcced8 658 Pfam PF06152 Phage minor capsid protein 2 2 354 4.0E-95 T 14-10-2018 IPR009319 Bacteriophage A118, Gp4, minor capsid GO:0005198 JO41_02905 1ecfdf02ef063dc7314806d27af89c22 143 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 6 114 1.3E-11 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_02905 1ecfdf02ef063dc7314806d27af89c22 143 SUPERFAMILY SSF88723 4 137 5.33E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_02905 1ecfdf02ef063dc7314806d27af89c22 143 Pfam PF13470 PIN domain 6 116 1.5E-14 T 14-10-2018 IPR002716 PIN domain JO41_10210 3ea25940b78c013bc784853a2c892aa7 384 Gene3D G3DSA:1.25.40.10 3 168 6.0E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10210 3ea25940b78c013bc784853a2c892aa7 384 SUPERFAMILY SSF48452 5 128 1.46E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10210 3ea25940b78c013bc784853a2c892aa7 384 SMART SM00028 51 84 82.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_10210 3ea25940b78c013bc784853a2c892aa7 384 SMART SM00028 85 118 1.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 Gene3D G3DSA:3.90.780.10 381 590 1.7E-50 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 Gene3D G3DSA:3.60.21.10 62 368 2.0E-73 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 PRINTS PR01607 Apyrase family signature 434 457 9.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 PRINTS PR01607 Apyrase family signature 67 85 9.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 PRINTS PR01607 Apyrase family signature 272 295 9.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 PRINTS PR01607 Apyrase family signature 246 263 9.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 PRINTS PR01607 Apyrase family signature 303 323 9.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 PRINTS PR01607 Apyrase family signature 521 540 9.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 SUPERFAMILY SSF56300 65 361 4.07E-73 T 14-10-2018 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 Pfam PF00149 Calcineurin-like phosphoesterase 70 289 1.5E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 SUPERFAMILY SSF55816 390 593 4.71E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 Pfam PF02872 5'-nucleotidase, C-terminal domain 392 538 1.3E-31 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_06220 c0d84091c7a3f33caf9b9e9cb91154ba 636 ProSitePatterns PS00786 5'-nucleotidase signature 2. 148 159 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JO41_07740 650d146182aba5eb149ad9e16feacff7 204 Gene3D G3DSA:3.30.2320.30 80 197 4.7E-6 T 14-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO41_07740 650d146182aba5eb149ad9e16feacff7 204 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 3 199 10.446 T 14-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO41_07740 650d146182aba5eb149ad9e16feacff7 204 SUPERFAMILY SSF160527 102 197 4.97E-10 T 14-10-2018 JO41_12165 d12a4b5b9996896f2bd276e538482fdb 951 SUPERFAMILY SSF53955 46 253 8.44E-65 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO41_12165 d12a4b5b9996896f2bd276e538482fdb 951 Pfam PF00905 Penicillin binding protein transpeptidase domain 414 692 1.0E-22 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO41_12165 d12a4b5b9996896f2bd276e538482fdb 951 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 724 1.9E-186 T 14-10-2018 JO41_12165 d12a4b5b9996896f2bd276e538482fdb 951 SUPERFAMILY SSF56601 215 783 1.22E-102 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO41_12165 d12a4b5b9996896f2bd276e538482fdb 951 Gene3D G3DSA:3.40.710.10 390 781 1.1E-90 T 14-10-2018 JO41_12165 d12a4b5b9996896f2bd276e538482fdb 951 Pfam PF00912 Transglycosylase 58 233 2.9E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_12165 d12a4b5b9996896f2bd276e538482fdb 951 Gene3D G3DSA:1.10.3810.10 51 249 2.2E-64 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_07630 b7a5d97a94e2e07d573be825883471de 120 Pfam PF04519 Polymer-forming cytoskeletal 19 115 1.0E-22 T 14-10-2018 IPR007607 Bactofilin A/B JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 Pfam PF14841 FliG middle domain 134 205 2.3E-18 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 Pfam PF01706 FliG C-terminal domain 237 341 7.0E-19 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 Gene3D G3DSA:1.10.220.30 105 211 9.6E-22 T 14-10-2018 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 8.3E-26 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 8.3E-26 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 8.3E-26 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 8.3E-26 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 8.3E-26 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 8.3E-26 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 Gene3D G3DSA:1.10.220.30 17 101 2.4E-11 T 14-10-2018 JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 Pfam PF14842 FliG N-terminal domain 26 125 4.7E-23 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 SUPERFAMILY SSF48029 134 343 1.11E-35 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 SUPERFAMILY SSF48029 24 139 1.15E-14 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JO41_11480 85e3d34c8aee74d733975a1e101a85df 353 Gene3D G3DSA:1.10.220.30 215 352 7.7E-25 T 14-10-2018 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 Gene3D G3DSA:1.20.1480.50 286 378 6.1E-10 T 14-10-2018 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 Gene3D G3DSA:3.30.450.20 135 187 4.4E-18 T 14-10-2018 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 Gene3D G3DSA:3.30.450.20 188 285 4.4E-18 T 14-10-2018 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 SMART SM00304 320 374 2.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 Gene3D G3DSA:1.10.287.950 386 695 8.4E-45 T 14-10-2018 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 613 3.8E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 SMART SM00283 417 664 5.9E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 Pfam PF02743 Cache domain 47 280 1.5E-24 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 SUPERFAMILY SSF103190 81 198 1.15E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_00295 abcbea160470cd0d473e030b5cce2d5a 709 SUPERFAMILY SSF58104 342 671 2.88E-46 T 14-10-2018 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 312 1.4E-77 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 314 28.85 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 Pfam PF00551 Formyl transferase 25 186 1.7E-37 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 Gene3D G3DSA:3.10.25.10 212 319 1.6E-28 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 Pfam PF02911 Formyl transferase, C-terminal domain 210 311 1.7E-25 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 SUPERFAMILY SSF53328 1 211 1.83E-52 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 Gene3D G3DSA:3.40.50.170 1 210 4.0E-66 T 14-10-2018 JO41_08935 6b1f4a7928471ebf0b817cec745dd155 325 SUPERFAMILY SSF50486 211 319 2.2E-23 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 JO41_04775 5107ac7c38a1b66390259529933c7457 402 SUPERFAMILY SSF46785 340 396 4.88E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_04775 5107ac7c38a1b66390259529933c7457 402 Gene3D G3DSA:3.30.565.60 121 284 9.7E-32 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily JO41_04775 5107ac7c38a1b66390259529933c7457 402 Pfam PF08279 HTH domain 341 381 1.4E-7 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JO41_04775 5107ac7c38a1b66390259529933c7457 402 Gene3D G3DSA:1.10.10.10 312 391 1.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_04775 5107ac7c38a1b66390259529933c7457 402 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 197 281 2.0E-15 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 Gene3D G3DSA:3.40.1360.10 74 196 2.3E-43 T 14-10-2018 JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 ProSitePatterns PS01300 RecR protein signature. 54 75 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 Pfam PF02132 RecR protein 37 75 4.1E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 Pfam PF13662 Toprim domain 77 169 1.8E-21 T 14-10-2018 IPR006171 TOPRIM domain JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 92.499 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 TIGRFAM TIGR00615 recR: recombination protein RecR 2 193 2.2E-77 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 Gene3D G3DSA:1.10.8.420 1 49 3.7E-16 T 14-10-2018 JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 SMART SM00493 77 163 4.5E-12 T 14-10-2018 IPR006171 TOPRIM domain JO41_10535 c524f1e6a7160703d817ddd55a0900a4 196 SUPERFAMILY SSF111304 2 196 3.53E-71 T 14-10-2018 IPR023627 Recombination protein RecR JO41_09340 3ab976794d51a7045dcd55e9abd5bf65 532 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 15 525 7.5E-183 T 14-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JO41_09340 3ab976794d51a7045dcd55e9abd5bf65 532 SUPERFAMILY SSF53383 117 520 5.8E-48 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_09340 3ab976794d51a7045dcd55e9abd5bf65 532 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 309 322 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 JO41_09340 3ab976794d51a7045dcd55e9abd5bf65 532 Pfam PF00155 Aminotransferase class I and II 159 514 1.8E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO41_09340 3ab976794d51a7045dcd55e9abd5bf65 532 Gene3D G3DSA:3.40.640.10 160 379 5.6E-202 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_09340 3ab976794d51a7045dcd55e9abd5bf65 532 Gene3D G3DSA:3.90.1150.10 35 523 5.6E-202 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_09340 3ab976794d51a7045dcd55e9abd5bf65 532 Gene3D G3DSA:1.10.20.110 40 403 5.6E-202 T 14-10-2018 JO41_05890 6ebfa1504a5d1f8ec2c0dbc81debc442 685 SUPERFAMILY SSF51445 11 675 1.1E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_05890 6ebfa1504a5d1f8ec2c0dbc81debc442 685 Pfam PF02446 4-alpha-glucanotransferase 15 657 7.2E-132 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JO41_05890 6ebfa1504a5d1f8ec2c0dbc81debc442 685 Gene3D G3DSA:3.20.20.80 456 681 1.3E-36 T 14-10-2018 JO41_05890 6ebfa1504a5d1f8ec2c0dbc81debc442 685 Gene3D G3DSA:3.20.20.80 7 353 8.9E-96 T 14-10-2018 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 Gene3D G3DSA:3.30.860.10 1 96 3.6E-34 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 92 24.903 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 94 4.6E-44 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 Pfam PF00203 Ribosomal protein S19 3 86 5.5E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 ProSitePatterns PS00323 Ribosomal protein S19 signature. 56 80 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 SUPERFAMILY SSF54570 2 87 3.14E-30 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 PIRSF PIRSF002144 1 96 3.3E-29 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 PRINTS PR00975 Ribosomal protein S19 family signature 56 68 1.2E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 PRINTS PR00975 Ribosomal protein S19 family signature 36 55 1.2E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04450 641c8075c67b53f8237b9f0be730f36a 96 PRINTS PR00975 Ribosomal protein S19 family signature 68 83 1.2E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_05180 05036da8796530a68c5db5bb8511d41b 189 SUPERFAMILY SSF48452 16 129 2.06E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05180 05036da8796530a68c5db5bb8511d41b 189 Gene3D G3DSA:1.25.40.10 14 146 3.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 Gene3D G3DSA:3.40.630.10 10 433 4.7E-149 T 14-10-2018 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 SUPERFAMILY SSF101821 89 216 1.37E-30 T 14-10-2018 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 14 435 2.1E-119 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 SUPERFAMILY SSF53187 4 436 2.67E-89 T 14-10-2018 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 Gene3D G3DSA:2.30.250.10 87 220 4.7E-149 T 14-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 402 417 6.0E-43 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 313 329 6.0E-43 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 111 131 6.0E-43 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 148 165 6.0E-43 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 77 93 6.0E-43 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_09535 eb6c070602d1cf78b8ed1da740b9d0ee 437 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 266 284 6.0E-43 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JO41_02475 5cbd846bf80c58e98a307e22036c0c56 90 Pfam PF01527 Transposase 2 68 3.2E-9 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JO41_02475 5cbd846bf80c58e98a307e22036c0c56 90 SUPERFAMILY SSF46689 1 87 1.36E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_03675 88d0e78ee821e47bc0c670813722876f 256 Gene3D G3DSA:2.50.20.10 23 254 1.2E-58 T 14-10-2018 JO41_03675 88d0e78ee821e47bc0c670813722876f 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 70 254 5.5E-56 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JO41_03955 e706bc4b94e747fa879f8cecfef847d5 273 SUPERFAMILY SSF52540 4 226 1.55E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03955 e706bc4b94e747fa879f8cecfef847d5 273 SMART SM00382 32 213 6.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_03955 e706bc4b94e747fa879f8cecfef847d5 273 Pfam PF00005 ABC transporter 24 166 8.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_03955 e706bc4b94e747fa879f8cecfef847d5 273 Gene3D G3DSA:3.40.50.300 2 233 6.0E-49 T 14-10-2018 JO41_10875 3b07fdd747dfd28121275fc77d5305ca 313 SUPERFAMILY SSF117892 95 208 2.75E-16 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO41_10875 3b07fdd747dfd28121275fc77d5305ca 313 Pfam PF01145 SPFH domain / Band 7 family 29 219 2.3E-26 T 14-10-2018 IPR001107 Band 7 domain JO41_10875 3b07fdd747dfd28121275fc77d5305ca 313 SMART SM00244 25 206 5.1E-37 T 14-10-2018 IPR001107 Band 7 domain JO41_10875 3b07fdd747dfd28121275fc77d5305ca 313 TIGRFAM TIGR01933 hflK: HflK protein 27 308 2.3E-102 T 14-10-2018 IPR010201 HflK GO:0016021 JO41_10875 3b07fdd747dfd28121275fc77d5305ca 313 Gene3D G3DSA:3.30.479.30 88 197 8.1E-14 T 14-10-2018 JO41_08965 b52671bf04503c9c49cca3e8444d7bd8 126 Gene3D G3DSA:3.30.1330.40 1 126 6.0E-53 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO41_08965 b52671bf04503c9c49cca3e8444d7bd8 126 Pfam PF01042 Endoribonuclease L-PSP 8 125 1.8E-42 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JO41_08965 b52671bf04503c9c49cca3e8444d7bd8 126 SUPERFAMILY SSF55298 1 125 1.88E-46 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO41_08965 b52671bf04503c9c49cca3e8444d7bd8 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 5.6E-50 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 JO41_11075 79f1f910f8f092dca2a6dd9baec01b9b 171 Pfam PF00881 Nitroreductase family 8 153 8.0E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JO41_11075 79f1f910f8f092dca2a6dd9baec01b9b 171 Gene3D G3DSA:3.40.109.10 1 171 2.5E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JO41_11075 79f1f910f8f092dca2a6dd9baec01b9b 171 SUPERFAMILY SSF55469 1 170 1.83E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JO41_10565 2d9df32391aff7b29bf47e263831a742 159 Gene3D G3DSA:1.10.150.120 77 158 5.4E-15 T 14-10-2018 JO41_10565 2d9df32391aff7b29bf47e263831a742 159 SUPERFAMILY SSF54292 1 77 2.06E-14 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JO41_10565 2d9df32391aff7b29bf47e263831a742 159 Gene3D G3DSA:3.10.20.30 1 76 1.6E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO41_10565 2d9df32391aff7b29bf47e263831a742 159 SUPERFAMILY SSF47741 81 154 4.58E-17 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily JO41_10565 2d9df32391aff7b29bf47e263831a742 159 Pfam PF01799 [2Fe-2S] binding domain 73 145 7.2E-14 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JO41_10250 5061034251b8e8c29f2e50cf08dcf010 204 Pfam PF01926 50S ribosome-binding GTPase 27 153 2.0E-17 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JO41_10250 5061034251b8e8c29f2e50cf08dcf010 204 Gene3D G3DSA:3.40.50.300 1 203 1.0E-47 T 14-10-2018 JO41_10250 5061034251b8e8c29f2e50cf08dcf010 204 SUPERFAMILY SSF52540 3 201 3.81E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10250 5061034251b8e8c29f2e50cf08dcf010 204 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 198 1.0E-56 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 JO41_10250 5061034251b8e8c29f2e50cf08dcf010 204 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 202 25.581 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 JO41_05450 2a62c541d12572bcbf8c49d568f521a9 254 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 42 147 7.8E-20 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 JO41_05450 2a62c541d12572bcbf8c49d568f521a9 254 SUPERFAMILY SSF54534 56 246 2.36E-59 T 14-10-2018 JO41_05450 2a62c541d12572bcbf8c49d568f521a9 254 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 242 2.3E-29 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JO41_05450 2a62c541d12572bcbf8c49d568f521a9 254 Gene3D G3DSA:1.10.287.460 53 107 9.7E-7 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 JO41_05450 2a62c541d12572bcbf8c49d568f521a9 254 Gene3D G3DSA:3.10.50.40 108 251 2.3E-57 T 14-10-2018 JO41_04545 5e8716cd93171d13b35c26a6ef0c1209 362 SUPERFAMILY SSF109998 37 212 6.67E-18 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily JO41_04545 5e8716cd93171d13b35c26a6ef0c1209 362 Pfam PF13145 PPIC-type PPIASE domain 170 304 3.4E-11 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 JO41_04545 5e8716cd93171d13b35c26a6ef0c1209 362 Gene3D G3DSA:3.10.50.40 190 294 3.8E-26 T 14-10-2018 JO41_04545 5e8716cd93171d13b35c26a6ef0c1209 362 SUPERFAMILY SSF54534 196 296 5.26E-5 T 14-10-2018 JO41_04545 5e8716cd93171d13b35c26a6ef0c1209 362 Pfam PF13624 SurA N-terminal domain 9 135 1.3E-7 T 14-10-2018 JO41_04545 5e8716cd93171d13b35c26a6ef0c1209 362 Gene3D G3DSA:1.10.4030.30 38 297 3.8E-26 T 14-10-2018 JO41_09020 70fae4396a8e5a1ff45150b30471c5de 116 SUPERFAMILY SSF81301 6 112 2.78E-27 T 14-10-2018 JO41_09020 70fae4396a8e5a1ff45150b30471c5de 116 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 108 3.7E-26 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JO41_09020 70fae4396a8e5a1ff45150b30471c5de 116 Pfam PF02410 Ribosomal silencing factor during starvation 14 108 1.6E-21 T 14-10-2018 JO41_09020 70fae4396a8e5a1ff45150b30471c5de 116 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 109 18.981 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JO41_09020 70fae4396a8e5a1ff45150b30471c5de 116 Gene3D G3DSA:3.30.460.10 5 115 3.9E-27 T 14-10-2018 JO41_06150 b372b95dc0b18da25561cf4a05a831f4 197 SUPERFAMILY SSF116734 2 192 2.13E-27 T 14-10-2018 JO41_06150 b372b95dc0b18da25561cf4a05a831f4 197 Pfam PF01420 Type I restriction modification DNA specificity domain 2 148 3.3E-9 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO41_06150 b372b95dc0b18da25561cf4a05a831f4 197 Gene3D G3DSA:3.90.220.20 1 189 3.5E-20 T 14-10-2018 JO41_06895 933c95ddfaff4ea59d3e5068d321dc84 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 63 2.8E-8 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO41_06895 933c95ddfaff4ea59d3e5068d321dc84 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 52 3.8E-8 T 14-10-2018 JO41_06895 933c95ddfaff4ea59d3e5068d321dc84 81 SUPERFAMILY SSF143120 4 72 1.44E-12 T 14-10-2018 IPR036165 YefM-like superfamily JO41_10530 b62a0978260f0e8a07367da88cfc5a6f 103 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 92 1.2E-23 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO41_10530 b62a0978260f0e8a07367da88cfc5a6f 103 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 1.0E-25 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO41_10530 b62a0978260f0e8a07367da88cfc5a6f 103 PIRSF PIRSF004555 1 103 5.5E-30 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO41_10530 b62a0978260f0e8a07367da88cfc5a6f 103 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 97 17.65 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JO41_10530 b62a0978260f0e8a07367da88cfc5a6f 103 SUPERFAMILY SSF82607 7 94 3.27E-25 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JO41_10530 b62a0978260f0e8a07367da88cfc5a6f 103 Gene3D G3DSA:3.30.1310.10 6 103 4.1E-27 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JO41_08745 40c5a582e65126bec3df196476cbe257 592 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 522 541 3.3E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_08745 40c5a582e65126bec3df196476cbe257 592 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 188 204 3.3E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_08745 40c5a582e65126bec3df196476cbe257 592 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 286 298 3.3E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_08745 40c5a582e65126bec3df196476cbe257 592 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 173 309 2.5E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_08745 40c5a582e65126bec3df196476cbe257 592 Gene3D G3DSA:2.10.109.10 464 591 1.8E-7 T 14-10-2018 JO41_08745 40c5a582e65126bec3df196476cbe257 592 Gene3D G3DSA:2.10.109.10 184 326 4.5E-13 T 14-10-2018 JO41_08745 40c5a582e65126bec3df196476cbe257 592 SUPERFAMILY SSF51306 187 314 1.36E-22 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO41_08745 40c5a582e65126bec3df196476cbe257 592 ProSitePatterns PS00760 Signal peptidases I lysine active site. 288 300 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 JO41_08745 40c5a582e65126bec3df196476cbe257 592 SUPERFAMILY SSF51306 510 592 1.26E-10 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO41_08745 40c5a582e65126bec3df196476cbe257 592 Pfam PF00717 Peptidase S24-like 194 254 1.4E-5 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JO41_03320 9b5b9de58f0e6f1abfa85a6ed255290e 201 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 14 197 7.6E-37 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_03320 9b5b9de58f0e6f1abfa85a6ed255290e 201 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 12 197 7.6E-28 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_01960 b8c110883434fba027c5a433b5055e66 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 307 4.4E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_01960 b8c110883434fba027c5a433b5055e66 309 SUPERFAMILY SSF161098 88 293 2.49E-20 T 14-10-2018 IPR035906 MetI-like superfamily JO41_01960 b8c110883434fba027c5a433b5055e66 309 Gene3D G3DSA:1.10.3720.10 85 303 1.3E-22 T 14-10-2018 IPR035906 MetI-like superfamily JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 SUPERFAMILY SSF103190 114 164 2.01E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 Gene3D G3DSA:1.10.287.950 421 641 5.4E-43 T 14-10-2018 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 SUPERFAMILY SSF58104 321 422 7.06E-9 T 14-10-2018 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 SMART SM00283 396 643 1.8E-61 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 SUPERFAMILY SSF58104 406 638 1.96E-44 T 14-10-2018 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 Gene3D G3DSA:3.30.450.20 180 275 4.4E-7 T 14-10-2018 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 611 7.3E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 6.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 521 6.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 523 552 6.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 571 600 6.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 Pfam PF02743 Cache domain 26 261 5.0E-26 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 Gene3D G3DSA:3.30.450.20 72 163 6.0E-16 T 14-10-2018 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 Pfam PF00672 HAMP domain 300 347 2.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 Gene3D G3DSA:1.10.287.950 298 412 1.4E-10 T 14-10-2018 JO41_05250 e47704323774cf0fd3ca9b62bbf72760 686 SMART SM00304 299 353 2.7E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 Gene3D G3DSA:1.10.10.10 15 82 3.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 1.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 SUPERFAMILY SSF46785 16 85 7.18E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 SMART SM00345 23 81 2.8E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 Gene3D G3DSA:1.20.120.530 85 225 3.7E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 SUPERFAMILY SSF48008 90 223 6.28E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 Pfam PF07729 FCD domain 91 214 3.2E-20 T 14-10-2018 IPR011711 GntR, C-terminal JO41_11725 b1c34dfd9868b71c2bdaebc591039a02 232 SMART SM00895 91 216 1.7E-17 T 14-10-2018 IPR011711 GntR, C-terminal JO41_04365 635795606363431d5a67e63935cb3ac2 121 SUPERFAMILY SSF46946 2 120 2.36E-42 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JO41_04365 635795606363431d5a67e63935cb3ac2 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.3E-27 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04365 635795606363431d5a67e63935cb3ac2 121 Gene3D G3DSA:4.10.910.10 72 121 8.4E-28 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04365 635795606363431d5a67e63935cb3ac2 121 Gene3D G3DSA:1.10.8.50 1 71 5.8E-25 T 14-10-2018 JO41_04365 635795606363431d5a67e63935cb3ac2 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.4E-51 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04365 635795606363431d5a67e63935cb3ac2 121 PIRSF PIRSF002134 1 121 1.1E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04365 635795606363431d5a67e63935cb3ac2 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04365 635795606363431d5a67e63935cb3ac2 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.036 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04825 a8ba9b221ca9ba956b47636377080ad8 229 Pfam PF00149 Calcineurin-like phosphoesterase 1 193 2.9E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JO41_04825 a8ba9b221ca9ba956b47636377080ad8 229 SUPERFAMILY SSF56300 1 211 6.65E-30 T 14-10-2018 JO41_04825 a8ba9b221ca9ba956b47636377080ad8 229 Gene3D G3DSA:3.60.21.10 2 211 3.4E-9 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_08465 6ea7202ffc97878f0b4dfd82bf1c3be0 224 Pfam PF03483 B3/4 domain 68 202 4.3E-21 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO41_08465 6ea7202ffc97878f0b4dfd82bf1c3be0 224 Gene3D G3DSA:3.50.40.10 64 209 1.1E-7 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 JO41_08465 6ea7202ffc97878f0b4dfd82bf1c3be0 224 SUPERFAMILY SSF56037 65 212 1.12E-21 T 14-10-2018 JO41_08465 6ea7202ffc97878f0b4dfd82bf1c3be0 224 SMART SM00873 62 213 2.6E-6 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO41_12275 920c9ce0d379ab9690919446359ac25f 151 Pfam PF09406 Protein of unknown function (DUF2004) 62 151 9.9E-24 T 14-10-2018 IPR018546 Protein of unknown function DUF2004 JO41_11660 f9b9a673b711ce0a82f16b5eabae6e13 467 Gene3D G3DSA:2.30.40.10 5 465 1.5E-154 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_11660 f9b9a673b711ce0a82f16b5eabae6e13 467 SUPERFAMILY SSF51338 3 64 2.01E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_11660 f9b9a673b711ce0a82f16b5eabae6e13 467 Pfam PF01979 Amidohydrolase family 50 444 2.9E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO41_11660 f9b9a673b711ce0a82f16b5eabae6e13 467 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 5 463 2.8E-157 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 JO41_11660 f9b9a673b711ce0a82f16b5eabae6e13 467 SUPERFAMILY SSF51338 358 465 9.22E-31 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_11660 f9b9a673b711ce0a82f16b5eabae6e13 467 SUPERFAMILY SSF51556 54 391 9.65E-88 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_11660 f9b9a673b711ce0a82f16b5eabae6e13 467 Gene3D G3DSA:3.20.20.140 54 432 1.5E-154 T 14-10-2018 JO41_01430 af9471157d00581888ecaf1f6bd3c339 242 Gene3D G3DSA:2.60.40.10 146 240 9.5E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_01430 af9471157d00581888ecaf1f6bd3c339 242 SUPERFAMILY SSF81296 160 241 1.84E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set JO41_01430 af9471157d00581888ecaf1f6bd3c339 242 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 161 242 7.3E-7 T 14-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 JO41_04460 0999585282874a01fcfb741b758c7b28 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04460 0999585282874a01fcfb741b758c7b28 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 21.649 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JO41_04460 0999585282874a01fcfb741b758c7b28 94 Gene3D G3DSA:3.30.70.330 1 94 1.6E-32 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JO41_04460 0999585282874a01fcfb741b758c7b28 94 Pfam PF00276 Ribosomal protein L23 5 89 6.0E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JO41_04460 0999585282874a01fcfb741b758c7b28 94 SUPERFAMILY SSF54189 3 93 4.68E-30 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_03340 e70f129e1c54cf1e79e373d26f2c4b53 421 Gene3D G3DSA:1.25.40.10 21 192 1.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10740 27772db92dc475c7392ef460ba33b3f6 231 SUPERFAMILY SSF52540 3 218 7.52E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10740 27772db92dc475c7392ef460ba33b3f6 231 Gene3D G3DSA:3.40.50.300 2 229 1.6E-47 T 14-10-2018 JO41_10740 27772db92dc475c7392ef460ba33b3f6 231 Pfam PF00005 ABC transporter 20 155 1.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_10740 27772db92dc475c7392ef460ba33b3f6 231 ProSitePatterns PS00018 EF-hand calcium-binding domain. 104 116 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JO41_10740 27772db92dc475c7392ef460ba33b3f6 231 SMART SM00382 29 204 4.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11830 4c0291bd87ad0c4e6c3412d75f1bf1d3 646 Pfam PF09095 Domain of unknown function (DUF1926) 436 619 1.7E-8 T 14-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 JO41_11830 4c0291bd87ad0c4e6c3412d75f1bf1d3 646 SUPERFAMILY SSF88713 33 274 2.78E-27 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JO41_11830 4c0291bd87ad0c4e6c3412d75f1bf1d3 646 Pfam PF03065 Glycosyl hydrolase family 57 70 265 1.7E-24 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 JO41_11830 4c0291bd87ad0c4e6c3412d75f1bf1d3 646 Gene3D G3DSA:3.20.110.20 5 360 1.6E-47 T 14-10-2018 JO41_11830 4c0291bd87ad0c4e6c3412d75f1bf1d3 646 Gene3D G3DSA:2.70.98.10 424 623 1.2E-7 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JO41_11830 4c0291bd87ad0c4e6c3412d75f1bf1d3 646 SUPERFAMILY SSF74650 373 581 2.29E-28 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JO41_00420 995da1d40d9e229f3a08e372b9fb98e5 189 Gene3D G3DSA:1.10.3210.10 1 147 6.3E-12 T 14-10-2018 JO41_00420 995da1d40d9e229f3a08e372b9fb98e5 189 SMART SM00471 17 129 1.7E-4 T 14-10-2018 IPR003607 HD/PDEase domain JO41_00420 995da1d40d9e229f3a08e372b9fb98e5 189 Pfam PF01966 HD domain 22 112 7.2E-8 T 14-10-2018 IPR006674 HD domain JO41_00420 995da1d40d9e229f3a08e372b9fb98e5 189 SUPERFAMILY SSF109604 17 121 7.14E-17 T 14-10-2018 JO41_03115 da5cd16268f9e3e714c6a1aca99b2874 383 Gene3D G3DSA:3.40.50.620 5 286 4.6E-14 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_03115 da5cd16268f9e3e714c6a1aca99b2874 383 Pfam PF02540 NAD synthase 54 135 1.5E-4 T 14-10-2018 IPR022310 NAD/GMP synthase JO41_03115 da5cd16268f9e3e714c6a1aca99b2874 383 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 6 341 1.5E-66 T 14-10-2018 IPR020022 N-acetyl sugar amidotransferase JO41_03115 da5cd16268f9e3e714c6a1aca99b2874 383 SUPERFAMILY SSF52402 69 314 6.4E-19 T 14-10-2018 JO41_06440 af6ac3cec4c780b998c683b0ea33a357 238 Pfam PF10895 Domain of unknown function (DUF2715) 33 238 4.4E-44 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 Gene3D G3DSA:3.40.1160.10 1 313 1.3E-121 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PRINTS PR01469 Bacterial carbamate kinase signature 40 59 1.1E-59 T 14-10-2018 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PRINTS PR01469 Bacterial carbamate kinase signature 109 128 1.1E-59 T 14-10-2018 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PRINTS PR01469 Bacterial carbamate kinase signature 159 178 1.1E-59 T 14-10-2018 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 1.1E-59 T 14-10-2018 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PRINTS PR01469 Bacterial carbamate kinase signature 212 227 1.1E-59 T 14-10-2018 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PRINTS PR01469 Bacterial carbamate kinase signature 267 282 1.1E-59 T 14-10-2018 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PRINTS PR01469 Bacterial carbamate kinase signature 182 200 1.1E-59 T 14-10-2018 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 TIGRFAM TIGR00746 arcC: carbamate kinase 5 312 2.9E-113 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 PIRSF PIRSF000723 2 313 4.4E-125 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 SUPERFAMILY SSF53633 4 310 2.59E-81 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JO41_08500 e47767a2cd07d1dd9e7780b2f6101dc0 314 Pfam PF00696 Amino acid kinase family 5 294 2.7E-34 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JO41_12595 57633b3222bcfe7afbca4ddaa266739d 623 SUPERFAMILY SSF53850 64 610 8.84E-94 T 14-10-2018 JO41_12595 57633b3222bcfe7afbca4ddaa266739d 623 Gene3D G3DSA:3.40.190.10 30 317 5.2E-38 T 14-10-2018 JO41_12595 57633b3222bcfe7afbca4ddaa266739d 623 Gene3D G3DSA:3.10.105.10 343 581 3.0E-72 T 14-10-2018 JO41_12595 57633b3222bcfe7afbca4ddaa266739d 623 PIRSF PIRSF002741 3 315 2.9E-26 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO41_12595 57633b3222bcfe7afbca4ddaa266739d 623 PIRSF PIRSF002741 365 607 6.0E-38 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JO41_12595 57633b3222bcfe7afbca4ddaa266739d 623 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 123 527 6.2E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 3.5E-32 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 287 36.778 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 Gene3D G3DSA:3.40.50.10860 7 280 2.5E-104 T 14-10-2018 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 SUPERFAMILY SSF51735 121 284 1.71E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 285 1.1E-67 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 Gene3D G3DSA:3.40.50.720 5 263 2.5E-104 T 14-10-2018 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 SUPERFAMILY SSF53223 1 120 5.47E-32 T 14-10-2018 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 3.2E-77 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 3.2E-77 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 3.2E-77 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 3.2E-77 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 3.2E-77 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 243 259 3.2E-77 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_11740 052b91dee36b864ff4cbbf947ccebfc2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 260 278 3.2E-77 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JO41_03785 083868556a7ba07926a1aa538c52128e 1081 SUPERFAMILY SSF58113 458 617 3.66E-6 T 14-10-2018 JO41_03785 083868556a7ba07926a1aa538c52128e 1081 Gene3D G3DSA:1.20.120.20 386 531 5.2E-5 T 14-10-2018 JO41_03785 083868556a7ba07926a1aa538c52128e 1081 Gene3D G3DSA:1.20.120.20 587 732 9.4E-8 T 14-10-2018 JO41_07080 2e26cdcef90172be98230bcd2a206cd3 95 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 78 5.0E-17 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 JO41_07080 2e26cdcef90172be98230bcd2a206cd3 95 PIRSF PIRSF002736 1 95 1.6E-32 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 JO41_07080 2e26cdcef90172be98230bcd2a206cd3 95 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 87 1.1E-25 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 JO41_07080 2e26cdcef90172be98230bcd2a206cd3 95 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 84 4.3E-27 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 SUPERFAMILY SSF46565 1 89 1.14E-31 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 ProSitePatterns PS00636 Nt-dnaJ domain signature. 44 63 - T 14-10-2018 IPR018253 DnaJ domain, conserved site JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 Pfam PF00226 DnaJ domain 2 64 1.6E-29 T 14-10-2018 IPR001623 DnaJ domain JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 SMART SM00271 1 59 2.4E-34 T 14-10-2018 IPR001623 DnaJ domain JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 PRINTS PR00625 DnaJ domain signature 39 59 9.9E-26 T 14-10-2018 IPR001623 DnaJ domain JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 PRINTS PR00625 DnaJ domain signature 22 37 9.9E-26 T 14-10-2018 IPR001623 DnaJ domain JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 PRINTS PR00625 DnaJ domain signature 59 78 9.9E-26 T 14-10-2018 IPR001623 DnaJ domain JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 PRINTS PR00625 DnaJ domain signature 4 22 9.9E-26 T 14-10-2018 IPR001623 DnaJ domain JO41_10170 9b35c03254ec67adbc87b8f3b979fdba 178 Gene3D G3DSA:1.10.287.110 1 114 4.0E-31 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 SUPERFAMILY SSF53335 207 633 3.21E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 348 3.2E-16 T 14-10-2018 JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 356 370 3.2E-16 T 14-10-2018 JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 517 541 3.2E-16 T 14-10-2018 JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 480 492 3.2E-16 T 14-10-2018 JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 Gene3D G3DSA:1.20.1260.30 200 333 6.1E-7 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 Gene3D G3DSA:3.40.50.150 334 648 3.5E-55 T 14-10-2018 JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 Pfam PF02384 N-6 DNA Methylase 313 637 1.4E-33 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 68 174 1.3E-30 T 14-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain JO41_05485 5bce8db1e5faabf5bc6d997df7e1904e 670 Gene3D G3DSA:3.90.1570.30 43 181 2.2E-6 T 14-10-2018 JO41_04445 65020cb3066f5280381e86d4f5626006 121 Pfam PF00237 Ribosomal protein L22p/L17e 13 115 2.9E-28 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 JO41_04445 65020cb3066f5280381e86d4f5626006 121 Gene3D G3DSA:3.90.470.10 7 120 5.8E-37 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04445 65020cb3066f5280381e86d4f5626006 121 SUPERFAMILY SSF54843 6 118 1.7E-33 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JO41_04445 65020cb3066f5280381e86d4f5626006 121 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 8 118 22.536 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04445 65020cb3066f5280381e86d4f5626006 121 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 15 115 8.6E-26 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04445 65020cb3066f5280381e86d4f5626006 121 ProSitePatterns PS00464 Ribosomal protein L22 signature. 91 115 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_03630 deb9fb3db4098b91ccb3b65bd8b06c28 515 Pfam PF01409 tRNA synthetases class II core domain (F) 243 510 8.4E-78 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 JO41_03630 deb9fb3db4098b91ccb3b65bd8b06c28 515 SUPERFAMILY SSF55681 243 512 9.07E-57 T 14-10-2018 JO41_03630 deb9fb3db4098b91ccb3b65bd8b06c28 515 SUPERFAMILY SSF46785 10 78 1.78E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_03630 deb9fb3db4098b91ccb3b65bd8b06c28 515 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 217 509 2.8E-101 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JO41_03630 deb9fb3db4098b91ccb3b65bd8b06c28 515 Gene3D G3DSA:3.30.930.10 213 514 1.1E-84 T 14-10-2018 JO41_03630 deb9fb3db4098b91ccb3b65bd8b06c28 515 Hamap MF_00282 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 515 35.36 T 14-10-2018 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 JO41_03630 deb9fb3db4098b91ccb3b65bd8b06c28 515 SUPERFAMILY SSF46785 84 140 3.88E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_05800 f5984d0578ed7588bf58217e6b8289e2 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 242 3.1E-29 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JO41_05800 f5984d0578ed7588bf58217e6b8289e2 324 SUPERFAMILY SSF51735 1 314 1.39E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_05800 f5984d0578ed7588bf58217e6b8289e2 324 Gene3D G3DSA:3.40.50.720 1 312 5.8E-109 T 14-10-2018 JO41_09565 362f26f6098deedc4fd08d333afc9541 497 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_09565 362f26f6098deedc4fd08d333afc9541 497 Gene3D G3DSA:3.40.50.300 1 245 4.8E-53 T 14-10-2018 JO41_09565 362f26f6098deedc4fd08d333afc9541 497 SUPERFAMILY SSF52540 4 227 2.76E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09565 362f26f6098deedc4fd08d333afc9541 497 Gene3D G3DSA:3.40.50.300 258 492 5.2E-42 T 14-10-2018 JO41_09565 362f26f6098deedc4fd08d333afc9541 497 Pfam PF00005 ABC transporter 21 170 4.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09565 362f26f6098deedc4fd08d333afc9541 497 SUPERFAMILY SSF52540 251 476 7.93E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09565 362f26f6098deedc4fd08d333afc9541 497 SMART SM00382 30 226 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09565 362f26f6098deedc4fd08d333afc9541 497 SMART SM00382 280 474 5.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09565 362f26f6098deedc4fd08d333afc9541 497 Pfam PF00005 ABC transporter 271 425 4.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_08540 a1d36b2431fb411d418e5d5b3aec697e 113 SUPERFAMILY SSF46785 5 103 5.24E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_08540 a1d36b2431fb411d418e5d5b3aec697e 113 Gene3D G3DSA:1.10.10.10 2 112 3.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_08540 a1d36b2431fb411d418e5d5b3aec697e 113 Pfam PF01638 HxlR-like helix-turn-helix 15 102 1.4E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type JO41_00550 c92a7e4d3f9011ac483a27e4331e87bd 112 PRINTS PR01727 Prokaryotic integration host factor signature 49 64 4.0E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO41_00550 c92a7e4d3f9011ac483a27e4331e87bd 112 PRINTS PR01727 Prokaryotic integration host factor signature 68 81 4.0E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO41_00550 c92a7e4d3f9011ac483a27e4331e87bd 112 PRINTS PR01727 Prokaryotic integration host factor signature 84 98 4.0E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO41_00550 c92a7e4d3f9011ac483a27e4331e87bd 112 SUPERFAMILY SSF47729 11 100 1.25E-21 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO41_00550 c92a7e4d3f9011ac483a27e4331e87bd 112 Gene3D G3DSA:4.10.520.10 2 102 8.8E-26 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO41_00550 c92a7e4d3f9011ac483a27e4331e87bd 112 SMART SM00411 10 100 8.1E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO41_00550 c92a7e4d3f9011ac483a27e4331e87bd 112 Pfam PF00216 Bacterial DNA-binding protein 11 99 1.5E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO41_00435 de46f24c4826c03becf0ddb4c5740d9f 445 Pfam PF01554 MatE 23 183 2.6E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_00435 de46f24c4826c03becf0ddb4c5740d9f 445 Pfam PF01554 MatE 246 400 3.1E-12 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_00435 de46f24c4826c03becf0ddb4c5740d9f 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 5.7E-53 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_00435 de46f24c4826c03becf0ddb4c5740d9f 445 PIRSF PIRSF006603 1 444 3.7E-74 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 Gene3D G3DSA:3.40.50.970 334 532 1.1E-75 T 14-10-2018 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 Gene3D G3DSA:3.40.50.920 541 663 1.7E-29 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 Gene3D G3DSA:3.40.50.970 2 332 1.3E-114 T 14-10-2018 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 SMART SM00861 354 525 1.0E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 329 6.3E-138 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 SUPERFAMILY SSF52518 4 321 3.19E-104 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 SUPERFAMILY SSF52922 540 661 6.42E-27 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 661 2.0E-242 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 524 1.9E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JO41_11275 ef055776a80fd80b9e9b2519a7b90b5b 663 SUPERFAMILY SSF52518 346 527 3.26E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JO41_01130 36218443fdc4a827933d754b080c5fd7 108 SUPERFAMILY SSF75169 4 103 1.88E-8 T 14-10-2018 IPR027396 DsrEFH-like JO41_01130 36218443fdc4a827933d754b080c5fd7 108 Gene3D G3DSA:3.40.1260.10 3 105 5.8E-11 T 14-10-2018 IPR027396 DsrEFH-like JO41_09455 bd65a0dbda0c2f4e82f17d09429b6695 238 SUPERFAMILY SSF103088 112 232 7.98E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_09455 bd65a0dbda0c2f4e82f17d09429b6695 238 Gene3D G3DSA:3.30.1330.60 79 237 8.5E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_09455 bd65a0dbda0c2f4e82f17d09429b6695 238 Pfam PF00691 OmpA family 124 226 9.7E-21 T 14-10-2018 IPR006665 OmpA-like domain JO41_09455 bd65a0dbda0c2f4e82f17d09429b6695 238 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 52 1.5E-15 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain JO41_11080 c6d6640eef01d62236de2c280ba786d0 313 Pfam PF09992 Phosphodiester glycosidase 131 309 2.7E-23 T 14-10-2018 IPR018711 Phosphodiester glycosidase JO41_02775 f3b18735ec098da5d4380a7ff03f416b 280 Pfam PF01189 16S rRNA methyltransferase RsmB/F 61 230 5.5E-33 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 JO41_02775 f3b18735ec098da5d4380a7ff03f416b 280 SUPERFAMILY SSF53335 41 221 1.62E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_02775 f3b18735ec098da5d4380a7ff03f416b 280 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 142 154 7.7E-15 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JO41_02775 f3b18735ec098da5d4380a7ff03f416b 280 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 71 81 7.7E-15 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JO41_02775 f3b18735ec098da5d4380a7ff03f416b 280 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 192 208 7.7E-15 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JO41_02775 f3b18735ec098da5d4380a7ff03f416b 280 Gene3D G3DSA:3.40.50.150 52 279 1.4E-49 T 14-10-2018 JO41_07720 cc22caec450ee43e030a0a3548dd196f 205 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 3 196 4.4E-46 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO41_07720 cc22caec450ee43e030a0a3548dd196f 205 Pfam PF01813 ATP synthase subunit D 9 192 1.2E-44 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 Gene3D G3DSA:3.40.50.1860 8 225 1.4E-63 T 14-10-2018 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 214 2.3E-22 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 SUPERFAMILY SSF53681 6 105 5.95E-25 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 Gene3D G3DSA:3.40.50.1860 95 208 1.4E-63 T 14-10-2018 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 Hamap MF_00258 Glutamate racemase [murI]. 3 251 27.82 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 SUPERFAMILY SSF53681 108 238 6.87E-24 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO41_04915 9e257a180b309e4f786b8c984ac2876d 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 220 1.1E-51 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JO41_00205 779d408d83ee653bd98e1591dda079cf 174 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 171 16.829 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JO41_00205 779d408d83ee653bd98e1591dda079cf 174 SUPERFAMILY SSF50447 2 94 4.24E-12 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JO41_00205 779d408d83ee653bd98e1591dda079cf 174 Pfam PF01782 RimM N-terminal domain 6 93 9.2E-16 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 JO41_00205 779d408d83ee653bd98e1591dda079cf 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 167 4.9E-30 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JO41_00205 779d408d83ee653bd98e1591dda079cf 174 Gene3D G3DSA:2.30.30.240 98 173 1.4E-6 T 14-10-2018 JO41_00205 779d408d83ee653bd98e1591dda079cf 174 SUPERFAMILY SSF50346 103 166 3.14E-6 T 14-10-2018 IPR011033 PRC-barrel-like superfamily JO41_00205 779d408d83ee653bd98e1591dda079cf 174 Gene3D G3DSA:2.40.30.60 3 95 1.9E-14 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 JO41_03255 45af67b9104ae702d3d01e343c1b4151 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 293 3.2E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_12035 ac8acbcc1763f4067722ce2517fb3b53 109 Gene3D G3DSA:2.30.30.90 2 77 2.9E-9 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain JO41_12035 ac8acbcc1763f4067722ce2517fb3b53 109 SMART SM00899 2 71 7.9E-7 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JO41_12035 ac8acbcc1763f4067722ce2517fb3b53 109 SUPERFAMILY SSF50037 11 69 3.66E-5 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal JO41_12035 ac8acbcc1763f4067722ce2517fb3b53 109 Pfam PF04023 FeoA domain 11 69 1.5E-4 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JO41_11565 6ed34bfa101686030e3a9e31d7878fb6 476 Gene3D G3DSA:3.20.20.370 248 467 2.9E-66 T 14-10-2018 JO41_11565 6ed34bfa101686030e3a9e31d7878fb6 476 SUPERFAMILY SSF88713 252 459 8.0E-53 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JO41_11565 6ed34bfa101686030e3a9e31d7878fb6 476 Pfam PF04748 Divergent polysaccharide deacetylase 255 465 1.8E-64 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase JO41_11175 e63298dced22a9ce84737b92a00c1977 703 Gene3D G3DSA:3.90.1580.10 409 702 6.3E-48 T 14-10-2018 JO41_11175 e63298dced22a9ce84737b92a00c1977 703 Pfam PF03781 Sulfatase-modifying factor enzyme 1 416 701 1.4E-30 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JO41_11175 e63298dced22a9ce84737b92a00c1977 703 SUPERFAMILY SSF56436 416 701 6.83E-33 T 14-10-2018 IPR016187 C-type lectin fold JO41_00580 7f2e64518e3aab301e54ed37db6f7908 613 Pfam PF13535 ATP-grasp domain 166 306 1.4E-13 T 14-10-2018 JO41_00580 7f2e64518e3aab301e54ed37db6f7908 613 Gene3D G3DSA:3.40.50.20 1 121 2.5E-28 T 14-10-2018 JO41_00580 7f2e64518e3aab301e54ed37db6f7908 613 SUPERFAMILY SSF56059 107 331 6.01E-31 T 14-10-2018 JO41_00580 7f2e64518e3aab301e54ed37db6f7908 613 SUPERFAMILY SSF52440 4 65 2.36E-6 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JO41_00580 7f2e64518e3aab301e54ed37db6f7908 613 Gene3D G3DSA:3.30.470.20 213 434 6.6E-31 T 14-10-2018 JO41_00580 7f2e64518e3aab301e54ed37db6f7908 613 Gene3D G3DSA:3.30.1490.20 144 212 7.4E-9 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JO41_02230 31ab85b9368ee8c581485c864af0a848 100 SUPERFAMILY SSF47729 13 97 3.83E-10 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO41_02230 31ab85b9368ee8c581485c864af0a848 100 Pfam PF00216 Bacterial DNA-binding protein 13 97 1.0E-8 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JO41_02230 31ab85b9368ee8c581485c864af0a848 100 Gene3D G3DSA:4.10.520.10 8 98 3.1E-8 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JO41_04710 a121428268c9f2ef790440f9f8db3d90 507 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 49 503 2.8E-139 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JO41_04710 a121428268c9f2ef790440f9f8db3d90 507 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 11 502 9.7E-128 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JO41_05620 a0ea90b7d10f8777f9093e1bd86c68b8 439 Gene3D G3DSA:3.90.1380.10 1 85 2.6E-10 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily JO41_05620 a0ea90b7d10f8777f9093e1bd86c68b8 439 SUPERFAMILY SSF53686 1 433 1.08E-68 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JO41_05620 a0ea90b7d10f8777f9093e1bd86c68b8 439 Gene3D G3DSA:3.40.50.1100 87 402 1.3E-76 T 14-10-2018 JO41_05620 a0ea90b7d10f8777f9093e1bd86c68b8 439 Gene3D G3DSA:3.40.50.1100 104 408 1.3E-76 T 14-10-2018 JO41_05620 a0ea90b7d10f8777f9093e1bd86c68b8 439 Pfam PF14821 Threonine synthase N terminus 4 69 1.4E-7 T 14-10-2018 IPR029144 Threonine synthase, N-terminal JO41_12170 8b377b26187eb660923e94ea096caa88 163 SUPERFAMILY SSF53927 12 154 7.29E-36 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JO41_12170 8b377b26187eb660923e94ea096caa88 163 Gene3D G3DSA:3.40.140.10 7 160 1.0E-45 T 14-10-2018 JO41_12170 8b377b26187eb660923e94ea096caa88 163 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 129 7.4E-28 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JO41_12170 8b377b26187eb660923e94ea096caa88 163 PIRSF PIRSF006019 1 162 5.7E-45 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JO41_12170 8b377b26187eb660923e94ea096caa88 163 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 84 119 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JO41_00825 2f45d9605c8c23747ca6bf000e248b36 685 SUPERFAMILY SSF101898 151 400 1.65E-28 T 14-10-2018 JO41_00825 2f45d9605c8c23747ca6bf000e248b36 685 SUPERFAMILY SSF53300 467 625 4.45E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_00825 2f45d9605c8c23747ca6bf000e248b36 685 Gene3D G3DSA:1.25.40.10 34 107 1.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00825 2f45d9605c8c23747ca6bf000e248b36 685 Gene3D G3DSA:2.120.10.30 233 463 1.4E-25 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JO41_00825 2f45d9605c8c23747ca6bf000e248b36 685 Gene3D G3DSA:2.120.10.30 126 232 9.2E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JO41_00825 2f45d9605c8c23747ca6bf000e248b36 685 Gene3D G3DSA:3.40.50.410 464 642 7.2E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_00825 2f45d9605c8c23747ca6bf000e248b36 685 SUPERFAMILY SSF48452 38 102 4.8E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 Gene3D G3DSA:1.10.8.410 232 286 1.6E-25 T 14-10-2018 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 7.4E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 2.1E-37 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 Gene3D G3DSA:1.20.1330.10 43 184 8.8E-61 T 14-10-2018 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 Gene3D G3DSA:1.20.58.1830 3 31 8.8E-61 T 14-10-2018 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 SUPERFAMILY SSF64518 1 286 1.16E-82 T 14-10-2018 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 PRINTS PR00207 Flagellin signature 74 93 4.7E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 PRINTS PR00207 Flagellin signature 35 52 4.7E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_03550 314d3d5b5e6dd5d8341ffc97d51b27c2 286 PRINTS PR00207 Flagellin signature 109 132 4.7E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JO41_05990 0e9d1f26db785dec21cfb77ef7530c72 215 PIRSF PIRSF001357 1 215 6.2E-80 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO41_05990 0e9d1f26db785dec21cfb77ef7530c72 215 Pfam PF01791 DeoC/LacD family aldolase 14 210 1.6E-20 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO41_05990 0e9d1f26db785dec21cfb77ef7530c72 215 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 32.841 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 JO41_05990 0e9d1f26db785dec21cfb77ef7530c72 215 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 2 213 3.9E-77 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO41_05990 0e9d1f26db785dec21cfb77ef7530c72 215 Gene3D G3DSA:3.20.20.70 1 215 1.5E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_05990 0e9d1f26db785dec21cfb77ef7530c72 215 SMART SM01133 2 215 6.0E-97 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO41_05990 0e9d1f26db785dec21cfb77ef7530c72 215 SUPERFAMILY SSF51569 1 214 9.42E-82 T 14-10-2018 JO41_00365 089af097e29b488e7283f96d53f70102 305 Gene3D G3DSA:3.30.420.40 6 300 6.3E-76 T 14-10-2018 JO41_00365 089af097e29b488e7283f96d53f70102 305 SUPERFAMILY SSF53067 117 301 3.74E-44 T 14-10-2018 JO41_00365 089af097e29b488e7283f96d53f70102 305 SUPERFAMILY SSF53067 1 113 4.73E-20 T 14-10-2018 JO41_00365 089af097e29b488e7283f96d53f70102 305 Gene3D G3DSA:3.30.420.40 115 288 6.3E-76 T 14-10-2018 JO41_00365 089af097e29b488e7283f96d53f70102 305 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 300 6.4E-34 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JO41_01200 e4c3f39af9d83cdc6ba1d2141fa86e23 358 Gene3D G3DSA:3.40.50.720 49 343 6.8E-35 T 14-10-2018 JO41_01200 e4c3f39af9d83cdc6ba1d2141fa86e23 358 Gene3D G3DSA:3.40.50.720 107 325 6.8E-35 T 14-10-2018 JO41_01200 e4c3f39af9d83cdc6ba1d2141fa86e23 358 SUPERFAMILY SSF51735 110 277 5.29E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_01200 e4c3f39af9d83cdc6ba1d2141fa86e23 358 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 134 321 4.4E-22 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JO41_01775 101f4c2219283cb30f2ebbbc074d5a40 156 Gene3D G3DSA:1.10.455.10 2 156 3.7E-62 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JO41_01775 101f4c2219283cb30f2ebbbc074d5a40 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_01775 101f4c2219283cb30f2ebbbc074d5a40 156 SUPERFAMILY SSF47973 9 149 5.89E-58 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JO41_01775 101f4c2219283cb30f2ebbbc074d5a40 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.0E-63 T 14-10-2018 IPR023798 Ribosomal protein S7 domain JO41_01775 101f4c2219283cb30f2ebbbc074d5a40 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.744 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JO41_01775 101f4c2219283cb30f2ebbbc074d5a40 156 PIRSF PIRSF002122 3 156 3.1E-59 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 JO41_01775 101f4c2219283cb30f2ebbbc074d5a40 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.7E-70 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JO41_08700 59fcaa4f10b78271488873b762893e80 395 Pfam PF13742 OB-fold nucleic acid binding domain 5 98 3.0E-29 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 JO41_08700 59fcaa4f10b78271488873b762893e80 395 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 394 26.362 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JO41_08700 59fcaa4f10b78271488873b762893e80 395 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 392 1.4E-132 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JO41_08700 59fcaa4f10b78271488873b762893e80 395 Pfam PF02601 Exonuclease VII, large subunit 121 391 2.8E-77 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 JO41_07815 afc955ccd8bcc382c43293770fdc29ef 207 Gene3D G3DSA:1.10.10.10 1 86 6.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_07815 afc955ccd8bcc382c43293770fdc29ef 207 Pfam PF03551 Transcriptional regulator PadR-like family 5 76 5.6E-8 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal JO41_07815 afc955ccd8bcc382c43293770fdc29ef 207 SUPERFAMILY SSF46785 2 132 2.07E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_11150 a4a4ea09981939fe2f3af5940aebfe4a 340 Gene3D G3DSA:3.90.1150.10 213 339 9.8E-7 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_11150 a4a4ea09981939fe2f3af5940aebfe4a 340 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 335 7.7E-26 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_11150 a4a4ea09981939fe2f3af5940aebfe4a 340 SUPERFAMILY SSF53383 2 336 1.61E-35 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_11150 a4a4ea09981939fe2f3af5940aebfe4a 340 Gene3D G3DSA:3.40.640.10 11 206 1.6E-22 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_08520 ea27019f933df81c503125c6e689ace6 176 Gene3D G3DSA:3.40.50.2020 2 176 2.8E-58 T 14-10-2018 JO41_08520 ea27019f933df81c503125c6e689ace6 176 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 173 35.247 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 JO41_08520 ea27019f933df81c503125c6e689ace6 176 Pfam PF00156 Phosphoribosyl transferase domain 48 150 3.9E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO41_08520 ea27019f933df81c503125c6e689ace6 176 SUPERFAMILY SSF53271 11 174 1.19E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO41_08520 ea27019f933df81c503125c6e689ace6 176 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 173 7.0E-59 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 JO41_12095 e4ba8f0e7c9667eb10aab32f2f3449ee 256 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 2.0E-45 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_12095 e4ba8f0e7c9667eb10aab32f2f3449ee 256 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 221 5.0E-16 T 14-10-2018 JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.2E-44 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 Gene3D G3DSA:3.30.70.600 1 102 6.6E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 8.0E-34 T 14-10-2018 IPR027486 Ribosomal protein S10 domain JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 SUPERFAMILY SSF54999 5 101 6.15E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.8E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.8E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.8E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 25.008 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04475 7bae597632461dadfcc1e098d6f4307f 102 SMART SM01403 7 101 8.3E-52 T 14-10-2018 IPR027486 Ribosomal protein S10 domain JO41_06090 08f543fb0c2d5c73cd962939d82395e9 330 Pfam PF01551 Peptidase family M23 227 321 2.3E-29 T 14-10-2018 IPR016047 Peptidase M23 JO41_06090 08f543fb0c2d5c73cd962939d82395e9 330 SUPERFAMILY SSF51261 171 325 1.88E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_06090 08f543fb0c2d5c73cd962939d82395e9 330 Gene3D G3DSA:2.70.70.10 166 329 3.6E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 490 3.6E-22 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 575 775 2.2E-77 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Gene3D G3DSA:2.30.130.40 4 117 4.0E-20 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Gene3D G3DSA:1.20.58.1480 120 243 3.5E-33 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 SUPERFAMILY SSF52540 313 582 1.58E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Gene3D G3DSA:3.30.230.10 590 779 3.4E-75 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 PIRSF PIRSF001174 2 778 1.6E-292 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Gene3D G3DSA:3.40.50.300 313 491 1.2E-65 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Gene3D G3DSA:1.10.8.60 492 587 1.5E-25 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 SMART SM00382 348 493 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 SUPERFAMILY SSF54211 598 774 7.21E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Hamap MF_01973 Lon protease [lon]. 11 776 62.755 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 SMART SM00464 10 201 1.6E-53 T 14-10-2018 IPR003111 Lon, substrate-binding domain JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 SUPERFAMILY SSF88697 11 200 1.94E-30 T 14-10-2018 IPR015947 PUA-like superfamily JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 200 6.2E-34 T 14-10-2018 IPR003111 Lon, substrate-binding domain JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 TIGRFAM TIGR00763 lon: endopeptidase La 13 775 2.7E-284 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 1.4E-51 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 598 614 1.4E-51 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 1.4E-51 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 1.4E-51 T 14-10-2018 JO41_03030 5369b1ab9f550c8fa95b7c1117fca4f3 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 1.4E-51 T 14-10-2018 JO41_01150 27ceb96356ef6826b0a1a333907cd789 149 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 149 44.019 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JO41_01150 27ceb96356ef6826b0a1a333907cd789 149 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 6 134 4.0E-44 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JO41_01150 27ceb96356ef6826b0a1a333907cd789 149 Gene3D G3DSA:2.40.330.20 2 146 7.8E-43 T 14-10-2018 IPR038619 MraZ superfamily JO41_01150 27ceb96356ef6826b0a1a333907cd789 149 Pfam PF02381 MraZ protein, putative antitoxin-like 79 143 5.0E-20 T 14-10-2018 IPR020603 MraZ domain JO41_01150 27ceb96356ef6826b0a1a333907cd789 149 Pfam PF02381 MraZ protein, putative antitoxin-like 6 76 9.5E-18 T 14-10-2018 IPR020603 MraZ domain JO41_01150 27ceb96356ef6826b0a1a333907cd789 149 SUPERFAMILY SSF89447 4 141 1.12E-40 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JO41_01150 27ceb96356ef6826b0a1a333907cd789 149 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 6 144 2.3E-37 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JO41_09385 5eb059524ba6e2b1d78a0ce70384bd59 63 Gene3D G3DSA:3.40.630.30 1 57 5.8E-5 T 14-10-2018 JO41_08655 d3f9b267390034673c4ef9a92567a32b 243 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 241 3.3E-100 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 JO41_08655 d3f9b267390034673c4ef9a92567a32b 243 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_08655 d3f9b267390034673c4ef9a92567a32b 243 SUPERFAMILY SSF52540 3 230 1.36E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08655 d3f9b267390034673c4ef9a92567a32b 243 Pfam PF00005 ABC transporter 20 171 2.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_08655 d3f9b267390034673c4ef9a92567a32b 243 SMART SM00382 29 222 1.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_08655 d3f9b267390034673c4ef9a92567a32b 243 Gene3D G3DSA:3.40.50.300 3 241 2.4E-53 T 14-10-2018 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 SMART SM00028 96 129 0.0049 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 SMART SM00028 130 163 0.11 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 SMART SM00028 61 94 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 Pfam PF14559 Tetratricopeptide repeat 38 91 1.2E-7 T 14-10-2018 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 Pfam PF13432 Tetratricopeptide repeat 97 130 0.0019 T 14-10-2018 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 SUPERFAMILY SSF48452 24 166 3.72E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 Gene3D G3DSA:1.25.40.10 27 97 1.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04815 f65bc5199243a6f4aa8a5e7cca2d012c 245 Gene3D G3DSA:1.25.40.10 98 213 6.6E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 SMART SM00283 412 659 3.0E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 Gene3D G3DSA:1.10.287.950 395 701 8.1E-48 T 14-10-2018 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 Pfam PF00672 HAMP domain 315 364 2.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 SUPERFAMILY SSF103190 69 191 3.61E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 SUPERFAMILY SSF58104 423 654 1.15E-43 T 14-10-2018 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 510 537 8.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 587 616 8.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 433 462 8.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 539 568 8.6E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 Gene3D G3DSA:1.20.1480.50 281 374 1.3E-10 T 14-10-2018 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 SUPERFAMILY SSF58104 337 437 9.68E-8 T 14-10-2018 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 SMART SM00304 315 369 9.3E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 479 627 4.7E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 Pfam PF02743 Cache domain 42 277 7.0E-25 T 14-10-2018 IPR033479 Double Cache domain 1 JO41_06015 e89a541774ef1659d4f8b8db9f75b742 703 Gene3D G3DSA:3.30.450.20 150 280 1.5E-19 T 14-10-2018 JO41_02255 055671c743cb15f00a72d6974ab36549 126 Pfam PF01402 Ribbon-helix-helix protein, copG family 23 57 5.0E-6 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 JO41_04785 749712203890d7b972e2c7f82c73b52f 258 Gene3D G3DSA:3.40.50.300 4 252 4.3E-68 T 14-10-2018 JO41_04785 749712203890d7b972e2c7f82c73b52f 258 SUPERFAMILY SSF52540 6 231 7.98E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04785 749712203890d7b972e2c7f82c73b52f 258 SMART SM00382 35 222 3.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04785 749712203890d7b972e2c7f82c73b52f 258 Pfam PF00005 ABC transporter 26 174 1.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04785 749712203890d7b972e2c7f82c73b52f 258 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_10880 f2fb2b7ed592e479b766b3719bd168b8 332 Pfam PF01145 SPFH domain / Band 7 family 36 245 1.3E-22 T 14-10-2018 IPR001107 Band 7 domain JO41_10880 f2fb2b7ed592e479b766b3719bd168b8 332 SUPERFAMILY SSF117892 183 237 2.35E-7 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO41_10880 f2fb2b7ed592e479b766b3719bd168b8 332 Gene3D G3DSA:3.30.479.30 61 182 1.4E-9 T 14-10-2018 JO41_10880 f2fb2b7ed592e479b766b3719bd168b8 332 TIGRFAM TIGR01932 hflC: HflC protein 20 330 7.2E-113 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 JO41_10880 f2fb2b7ed592e479b766b3719bd168b8 332 SUPERFAMILY SSF117892 64 174 3.27E-13 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO41_10880 f2fb2b7ed592e479b766b3719bd168b8 332 SMART SM00244 32 232 1.0E-32 T 14-10-2018 IPR001107 Band 7 domain JO41_10880 f2fb2b7ed592e479b766b3719bd168b8 332 PIRSF PIRSF005651 5 332 5.4E-101 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 JO41_09925 b8aefbfd4d558d384dc13e388373bf1c 134 Gene3D G3DSA:1.10.10.10 2 75 7.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_09925 b8aefbfd4d558d384dc13e388373bf1c 134 Pfam PF01475 Ferric uptake regulator family 6 120 8.9E-27 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JO41_09925 b8aefbfd4d558d384dc13e388373bf1c 134 Gene3D G3DSA:3.30.1490.190 78 133 5.7E-18 T 14-10-2018 JO41_09925 b8aefbfd4d558d384dc13e388373bf1c 134 SUPERFAMILY SSF46785 3 127 3.77E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 PIRSF PIRSF000102 2 314 4.1E-105 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 2.6E-110 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 Gene3D G3DSA:3.40.50.720 1 146 7.6E-53 T 14-10-2018 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 315 40.545 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 SUPERFAMILY SSF56327 145 310 2.23E-51 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 3.3E-26 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 144 1.3E-41 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 Gene3D G3DSA:3.90.110.10 147 314 1.1E-57 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 1.7E-41 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 1.7E-41 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 1.7E-41 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 1.7E-41 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 1.7E-41 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 SUPERFAMILY SSF51735 3 146 3.25E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_06430 a4a173b8fe3992de166989eb1f25bcd8 315 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 174 180 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 JO41_00945 1f4df18f5e40a856655a26e56fe71bf7 180 Pfam PF14470 Bacterial PH domain 33 123 1.2E-22 T 14-10-2018 IPR039519 YokE-like, PH domain JO41_00945 1f4df18f5e40a856655a26e56fe71bf7 180 Pfam PF09851 Short C-terminal domain 152 178 5.6E-7 T 14-10-2018 IPR018649 SHOCT domain JO41_11040 f2275fc580c386b9c2eff1ab231eb838 195 Gene3D G3DSA:3.90.950.10 1 194 2.6E-66 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO41_11040 f2275fc580c386b9c2eff1ab231eb838 195 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 185 4.6E-55 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 JO41_11040 f2275fc580c386b9c2eff1ab231eb838 195 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 192 43.103 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 JO41_11040 f2275fc580c386b9c2eff1ab231eb838 195 Pfam PF01725 Ham1 family 3 185 5.2E-53 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 JO41_11040 f2275fc580c386b9c2eff1ab231eb838 195 SUPERFAMILY SSF52972 1 191 7.85E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JO41_06980 936c5082aa5f287202c3263c20c9f4b8 516 Gene3D G3DSA:3.40.50.300 7 102 6.2E-8 T 14-10-2018 JO41_06980 936c5082aa5f287202c3263c20c9f4b8 516 Pfam PF05872 Bacterial protein of unknown function (DUF853) 10 510 4.6E-216 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal JO41_06980 936c5082aa5f287202c3263c20c9f4b8 516 Gene3D G3DSA:3.40.50.300 190 373 5.3E-23 T 14-10-2018 JO41_06980 936c5082aa5f287202c3263c20c9f4b8 516 SUPERFAMILY SSF52540 15 367 9.5E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10475 2c656c411580178dc60e337816b65195 248 Pfam PF00899 ThiF family 14 231 9.1E-37 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JO41_10475 2c656c411580178dc60e337816b65195 248 SUPERFAMILY SSF69572 8 233 5.23E-50 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 JO41_10475 2c656c411580178dc60e337816b65195 248 Gene3D G3DSA:3.40.50.720 1 243 6.6E-60 T 14-10-2018 JO41_10010 f346b1b2224e2999b7f3d6d40ab8e20a 474 Gene3D G3DSA:3.40.50.12780 2 384 2.0E-69 T 14-10-2018 JO41_10010 f346b1b2224e2999b7f3d6d40ab8e20a 474 SUPERFAMILY SSF56801 4 471 7.33E-81 T 14-10-2018 JO41_10010 f346b1b2224e2999b7f3d6d40ab8e20a 474 ProSitePatterns PS00455 Putative AMP-binding domain signature. 138 149 - T 14-10-2018 IPR020845 AMP-binding, conserved site JO41_10010 f346b1b2224e2999b7f3d6d40ab8e20a 474 Gene3D G3DSA:3.30.300.30 385 473 6.6E-5 T 14-10-2018 JO41_10010 f346b1b2224e2999b7f3d6d40ab8e20a 474 Pfam PF00501 AMP-binding enzyme 7 388 2.6E-58 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 SMART SM00382 359 545 4.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 Pfam PF00664 ABC transporter transmembrane region 41 289 4.1E-14 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 Gene3D G3DSA:1.20.1560.10 2 322 6.7E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 Pfam PF00005 ABC transporter 351 499 6.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 SUPERFAMILY SSF90123 6 322 1.31E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 SUPERFAMILY SSF52540 330 566 7.93E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 Gene3D G3DSA:3.40.50.300 328 577 2.4E-84 T 14-10-2018 JO41_09335 6dc36edd2977e1f51cf5622e97666244 579 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 Pfam PF01546 Peptidase family M20/M25/M40 76 440 4.2E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 Gene3D G3DSA:3.40.630.10 23 334 7.8E-50 T 14-10-2018 JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 SUPERFAMILY SSF55031 192 324 1.79E-12 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 Gene3D G3DSA:3.30.70.360 193 331 7.8E-50 T 14-10-2018 JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 Gene3D G3DSA:3.40.630.10 345 447 7.2E-9 T 14-10-2018 JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 Pfam PF07687 Peptidase dimerisation domain 190 311 4.8E-20 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 5 445 6.8E-190 T 14-10-2018 IPR017706 Peptidase M20/DapE, YgeY JO41_06780 a3d4df53f758eed2d0c0ebbf72292309 448 SUPERFAMILY SSF53187 6 440 3.43E-44 T 14-10-2018 JO41_01900 4b20ac30a21ef739212b00f53130195e 219 Pfam PF02361 Cobalt transport protein 4 180 1.0E-10 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO41_08010 31b533ad262bf30e1ce7bb83f7facccf 194 SUPERFAMILY SSF50475 5 180 3.93E-30 T 14-10-2018 JO41_08010 31b533ad262bf30e1ce7bb83f7facccf 194 Gene3D G3DSA:2.30.110.10 4 194 1.8E-46 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO41_08010 31b533ad262bf30e1ce7bb83f7facccf 194 Pfam PF01613 Flavin reductase like domain 16 149 1.5E-12 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JO41_07935 c5a133d03779f861fbe1da0ab93d2d14 642 Gene3D G3DSA:3.90.199.10 23 433 8.9E-109 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JO41_07935 c5a133d03779f861fbe1da0ab93d2d14 642 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 23 436 1.7E-115 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_07935 c5a133d03779f861fbe1da0ab93d2d14 642 SUPERFAMILY SSF56719 4 455 1.44E-108 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO41_07935 c5a133d03779f861fbe1da0ab93d2d14 642 Gene3D G3DSA:1.10.268.10 332 428 8.9E-109 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JO41_07935 c5a133d03779f861fbe1da0ab93d2d14 642 SMART SM00434 1 434 2.6E-113 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JO41_07935 c5a133d03779f861fbe1da0ab93d2d14 642 Gene3D G3DSA:3.30.1360.40 205 295 8.9E-109 T 14-10-2018 JO41_11745 2ff8879f81872297f020c03690cf1383 374 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 142 7.4E-34 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_11745 2ff8879f81872297f020c03690cf1383 374 Gene3D G3DSA:3.40.50.2000 167 335 2.5E-93 T 14-10-2018 JO41_11745 2ff8879f81872297f020c03690cf1383 374 SUPERFAMILY SSF53756 4 371 6.28E-89 T 14-10-2018 JO41_11745 2ff8879f81872297f020c03690cf1383 374 Gene3D G3DSA:3.40.50.2000 5 166 2.5E-93 T 14-10-2018 JO41_11745 2ff8879f81872297f020c03690cf1383 374 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 371 28.772 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_11745 2ff8879f81872297f020c03690cf1383 374 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 353 7.5E-32 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 JO41_11745 2ff8879f81872297f020c03690cf1383 374 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 366 6.5E-83 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_05730 ce9c6bc2f17603372d3e2a22090910f4 249 SUPERFAMILY SSF56300 29 195 1.29E-29 T 14-10-2018 JO41_05730 ce9c6bc2f17603372d3e2a22090910f4 249 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 29 191 2.3E-18 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 JO41_05730 ce9c6bc2f17603372d3e2a22090910f4 249 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 29 195 7.6E-21 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 JO41_05730 ce9c6bc2f17603372d3e2a22090910f4 249 Gene3D G3DSA:3.60.21.10 27 205 9.0E-30 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JO41_07165 37206350377f72f20bc339bf90a84547 247 Gene3D G3DSA:1.10.10.10 185 246 1.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_07165 37206350377f72f20bc339bf90a84547 247 Pfam PF00196 Bacterial regulatory proteins, luxR family 185 232 3.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO41_07165 37206350377f72f20bc339bf90a84547 247 SMART SM00421 183 239 2.7E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JO41_07165 37206350377f72f20bc339bf90a84547 247 SUPERFAMILY SSF46894 170 246 1.22E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 SMART SM01027 257 383 2.3E-56 T 14-10-2018 IPR022712 Beta-Casp domain JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 SUPERFAMILY SSF56281 2 468 4.81E-116 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 Pfam PF00753 Metallo-beta-lactamase superfamily 23 99 5.6E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 398 459 1.2E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 SMART SM00849 15 230 7.1E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 Pfam PF10996 Beta-Casp domain 257 383 5.3E-26 T 14-10-2018 IPR022712 Beta-Casp domain JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 Gene3D G3DSA:3.60.15.10 8 440 1.8E-138 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_10280 a5886f2b51332d875a7dda7ca03ace61 468 Gene3D G3DSA:3.40.50.10890 225 413 1.8E-138 T 14-10-2018 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 Pfam PF01235 Sodium:alanine symporter family 62 463 4.7E-142 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 TIGRFAM TIGR00835 agcS: amino acid carrier protein 25 459 9.7E-140 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 PRINTS PR00175 Sodium/alanine symporter signature 100 122 8.5E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 PRINTS PR00175 Sodium/alanine symporter signature 223 242 8.5E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 PRINTS PR00175 Sodium/alanine symporter signature 428 448 8.5E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 PRINTS PR00175 Sodium/alanine symporter signature 195 213 8.5E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 PRINTS PR00175 Sodium/alanine symporter signature 318 336 8.5E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 PRINTS PR00175 Sodium/alanine symporter signature 369 391 8.5E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_03905 a06696ad4b1b07dd53e2091d0f54bda4 473 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 100 115 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JO41_11325 071785c753ac573650be91aede4d9533 523 Gene3D G3DSA:1.20.1430.10 414 523 2.5E-31 T 14-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JO41_11325 071785c753ac573650be91aede4d9533 523 SUPERFAMILY SSF88688 414 523 1.57E-30 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily JO41_11325 071785c753ac573650be91aede4d9533 523 Gene3D G3DSA:3.20.110.10 2 401 1.9E-98 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily JO41_11325 071785c753ac573650be91aede4d9533 523 Pfam PF09210 Domain of unknown function (DUF1957) 422 521 1.3E-28 T 14-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JO41_11325 071785c753ac573650be91aede4d9533 523 Pfam PF03065 Glycosyl hydrolase family 57 8 250 5.3E-18 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 JO41_11325 071785c753ac573650be91aede4d9533 523 SUPERFAMILY SSF88713 4 403 5.34E-62 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JO41_03370 8067d731c14f41a271d8583ff61fb4d0 336 SUPERFAMILY SSF52540 3 192 4.04E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03370 8067d731c14f41a271d8583ff61fb4d0 336 Pfam PF06144 DNA polymerase III, delta subunit 42 167 2.2E-9 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 JO41_03370 8067d731c14f41a271d8583ff61fb4d0 336 Gene3D G3DSA:1.10.8.60 128 194 1.9E-8 T 14-10-2018 JO41_03370 8067d731c14f41a271d8583ff61fb4d0 336 Gene3D G3DSA:1.20.272.10 195 326 6.6E-14 T 14-10-2018 JO41_03370 8067d731c14f41a271d8583ff61fb4d0 336 Gene3D G3DSA:3.40.50.300 2 121 3.7E-12 T 14-10-2018 JO41_03370 8067d731c14f41a271d8583ff61fb4d0 336 SUPERFAMILY SSF48019 197 311 3.23E-12 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JO41_03370 8067d731c14f41a271d8583ff61fb4d0 336 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 4 316 3.1E-40 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 JO41_11450 9b85042d4bc80fcb195f412e78ff7ed9 733 Pfam PF16314 Domain of unknown function (DUF4954) 42 727 1.6E-131 T 14-10-2018 IPR032533 Protein of unknown function DUF4954 JO41_11450 9b85042d4bc80fcb195f412e78ff7ed9 733 SUPERFAMILY SSF51161 229 332 2.23E-6 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JO41_09370 03ff93ad4c9f632e6b2a335b4bfc535d 138 Pfam PF08349 Protein of unknown function (DUF1722) 18 125 8.7E-25 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 JO41_07595 5e6945d81501b71388d3dd1e630868d6 164 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JO41_07595 5e6945d81501b71388d3dd1e630868d6 164 Gene3D G3DSA:1.10.150.120 77 164 1.4E-28 T 14-10-2018 JO41_07595 5e6945d81501b71388d3dd1e630868d6 164 SUPERFAMILY SSF47741 87 154 1.7E-27 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily JO41_07595 5e6945d81501b71388d3dd1e630868d6 164 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 58 3.6E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JO41_07595 5e6945d81501b71388d3dd1e630868d6 164 Pfam PF01799 [2Fe-2S] binding domain 75 148 3.7E-27 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JO41_07595 5e6945d81501b71388d3dd1e630868d6 164 SUPERFAMILY SSF54292 5 80 8.26E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JO41_07595 5e6945d81501b71388d3dd1e630868d6 164 Gene3D G3DSA:3.10.20.30 2 76 3.2E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JO41_07095 96bf97f1cfc546eb1bc7acb74cdbed70 88 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 85 4.6E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_07095 96bf97f1cfc546eb1bc7acb74cdbed70 88 SUPERFAMILY SSF143011 1 84 7.46E-21 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_07095 96bf97f1cfc546eb1bc7acb74cdbed70 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 85 6.2E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_07095 96bf97f1cfc546eb1bc7acb74cdbed70 88 Gene3D G3DSA:3.30.2310.20 1 87 2.5E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_03985 ee027d26066722c444cb4ba9e829ebb3 207 ProDom PD155205 TRANSMEMBRANE MEMBRANE TP0733 TP0126 41 206 7.0E-54 T 14-10-2018 JO41_02670 2aede2228f811b40cad256151d210d42 359 SUPERFAMILY SSF53784 3 350 1.05E-116 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 5 358 41.337 T 14-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JO41_02670 2aede2228f811b40cad256151d210d42 359 Gene3D G3DSA:3.40.50.450 7 333 4.2E-111 T 14-10-2018 JO41_02670 2aede2228f811b40cad256151d210d42 359 Gene3D G3DSA:3.40.50.460 152 289 4.2E-111 T 14-10-2018 JO41_02670 2aede2228f811b40cad256151d210d42 359 Pfam PF00365 Phosphofructokinase 6 308 1.0E-102 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 150 168 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 132 149 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 188 205 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 224 236 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 273 295 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 105 121 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 170 186 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 4.3E-71 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JO41_02670 2aede2228f811b40cad256151d210d42 359 PIRSF PIRSF000532 3 359 1.7E-118 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JO41_07905 e8acef353f365f071fd09908d0ea879f 302 SUPERFAMILY SSF102114 29 194 1.05E-12 T 14-10-2018 JO41_07905 e8acef353f365f071fd09908d0ea879f 302 Pfam PF04055 Radical SAM superfamily 31 191 3.0E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_07905 e8acef353f365f071fd09908d0ea879f 302 Gene3D G3DSA:3.80.30.30 71 262 1.4E-6 T 14-10-2018 JO41_07905 e8acef353f365f071fd09908d0ea879f 302 TIGRFAM TIGR04470 rSAM_mob_pairB: radical SAM mobile pair protein B 10 294 9.1E-184 T 14-10-2018 IPR031012 Radical SAM mobile pair protein B JO41_03310 940a8a56e7d695f99fdb3989209782f5 432 Pfam PF00860 Permease family 16 393 3.7E-48 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JO41_03310 940a8a56e7d695f99fdb3989209782f5 432 PIRSF PIRSF005353 1 432 9.6E-175 T 14-10-2018 IPR026033 Purine permease PbuG-like JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 SMART SM00436 125 216 2.5E-23 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 Gene3D G3DSA:1.10.290.10 275 403 1.3E-97 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 SUPERFAMILY SSF56712 1 586 4.58E-123 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 SMART SM00437 266 542 9.5E-34 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 Gene3D G3DSA:1.10.460.10 161 583 1.3E-97 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 Gene3D G3DSA:3.40.50.140 1 154 3.7E-41 T 14-10-2018 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 SMART SM00493 1 123 8.3E-9 T 14-10-2018 IPR006171 TOPRIM domain JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 Pfam PF01751 Toprim domain 4 130 1.4E-10 T 14-10-2018 IPR006171 TOPRIM domain JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 Pfam PF01131 DNA topoisomerase 154 568 1.1E-87 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 389 405 3.3E-18 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 505 519 3.3E-18 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 3.3E-18 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 309 318 3.3E-18 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 3.3E-18 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JO41_02280 9b497977349f61fa78fd350f9ae9c7c1 692 Gene3D G3DSA:2.70.20.10 210 481 1.3E-97 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JO41_07705 48b952a9354375c78cdbf8cdabe5528d 184 Pfam PF10895 Domain of unknown function (DUF2715) 22 184 1.6E-33 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO41_09635 194b1bdfa735a7d8ddd3e8846f826e35 239 Pfam PF13432 Tetratricopeptide repeat 165 218 7.1E-7 T 14-10-2018 JO41_09635 194b1bdfa735a7d8ddd3e8846f826e35 239 SUPERFAMILY SSF48452 71 218 9.28E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09635 194b1bdfa735a7d8ddd3e8846f826e35 239 SMART SM00028 188 221 0.072 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09635 194b1bdfa735a7d8ddd3e8846f826e35 239 SMART SM00028 69 102 0.022 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_09635 194b1bdfa735a7d8ddd3e8846f826e35 239 Pfam PF07719 Tetratricopeptide repeat 71 102 1.8E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 JO41_09635 194b1bdfa735a7d8ddd3e8846f826e35 239 Gene3D G3DSA:1.25.40.10 31 237 1.2E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05105 246a72f80b3e58e753dedba398d24453 86 SUPERFAMILY SSF143120 2 75 6.28E-14 T 14-10-2018 IPR036165 YefM-like superfamily JO41_05105 246a72f80b3e58e753dedba398d24453 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 68 4.1E-6 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO41_11140 97287b5db92f97dac5fa4c27a7754440 563 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 557 2.9E-179 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JO41_11140 97287b5db92f97dac5fa4c27a7754440 563 Gene3D G3DSA:3.40.50.300 1 268 7.0E-44 T 14-10-2018 JO41_11140 97287b5db92f97dac5fa4c27a7754440 563 Gene3D G3DSA:3.40.50.300 269 558 1.9E-57 T 14-10-2018 JO41_11140 97287b5db92f97dac5fa4c27a7754440 563 SMART SM00382 21 514 0.0023 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11140 97287b5db92f97dac5fa4c27a7754440 563 SUPERFAMILY SSF52540 2 514 2.4E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11140 97287b5db92f97dac5fa4c27a7754440 563 PIRSF PIRSF003128 1 560 7.0E-167 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JO41_11140 97287b5db92f97dac5fa4c27a7754440 563 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 517 3.3E-18 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JO41_12065 4bb5e2b514426f5270dfe76ce0041327 134 PIRSF PIRSF016789 1 123 1.6E-33 T 14-10-2018 IPR007401 Protein of unknown function DUF454 JO41_12065 4bb5e2b514426f5270dfe76ce0041327 134 Pfam PF04304 Protein of unknown function (DUF454) 2 117 1.7E-36 T 14-10-2018 IPR007401 Protein of unknown function DUF454 JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 PIRSF PIRSF004640 2 373 2.9E-122 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 369 29.355 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 Gene3D G3DSA:3.20.20.20 3 271 5.6E-76 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 Gene3D G3DSA:3.30.413.10 272 369 8.2E-25 T 14-10-2018 JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 SUPERFAMILY SSF56014 278 334 3.01E-7 T 14-10-2018 JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 SUPERFAMILY SSF51604 38 138 6.18E-5 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3 350 1.8E-113 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO41_10215 a4d6bc782e750c129a34a6a569e930a5 374 Pfam PF04551 GcpE protein 15 356 6.6E-108 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JO41_00805 98cf9a7b9c126fc67abfa42b931c9db9 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 140 6.3E-5 T 14-10-2018 IPR000182 GNAT domain JO41_00805 98cf9a7b9c126fc67abfa42b931c9db9 159 SUPERFAMILY SSF55729 26 137 1.01E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_00805 98cf9a7b9c126fc67abfa42b931c9db9 159 Gene3D G3DSA:3.40.630.30 15 144 9.1E-10 T 14-10-2018 JO41_03350 7f5e935875041088e4a249efb361f786 449 Pfam PF00209 Sodium:neurotransmitter symporter family 151 444 1.9E-29 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_03350 7f5e935875041088e4a249efb361f786 449 Pfam PF00209 Sodium:neurotransmitter symporter family 7 126 5.9E-17 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_03350 7f5e935875041088e4a249efb361f786 449 SUPERFAMILY SSF161070 7 444 2.35E-113 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 JO41_03350 7f5e935875041088e4a249efb361f786 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 4.9E-9 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_03350 7f5e935875041088e4a249efb361f786 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 301 320 4.9E-9 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_03350 7f5e935875041088e4a249efb361f786 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 4.9E-9 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SUPERFAMILY SSF51126 436 648 3.71E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SUPERFAMILY SSF51126 748 1076 9.2E-15 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 955 976 2600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 885 911 8600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 854 880 1900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 995 1015 1400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 456 477 2600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 922 950 1600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 1063 1090 350.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 548 569 7400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 822 853 730.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 1164 1185 9700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 1130 1159 110.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_07960 95f59e5f5bc8923508b238baf0205a5a 1294 SMART SM00710 1035 1056 6900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JO41_05075 97d0b3c85ba0e4d0467bcd0eb8d02550 251 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 10 236 8.1E-40 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JO41_05075 97d0b3c85ba0e4d0467bcd0eb8d02550 251 Gene3D G3DSA:3.20.20.190 1 245 3.2E-76 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JO41_05075 97d0b3c85ba0e4d0467bcd0eb8d02550 251 SUPERFAMILY SSF51695 4 241 9.63E-71 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JO41_00320 bbb96a941b20e6f88d8588c31681c51a 347 SUPERFAMILY SSF53335 13 289 4.47E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_00320 bbb96a941b20e6f88d8588c31681c51a 347 Gene3D G3DSA:3.30.750.80 10 107 8.3E-21 T 14-10-2018 JO41_00320 bbb96a941b20e6f88d8588c31681c51a 347 Gene3D G3DSA:3.40.50.150 108 344 5.9E-70 T 14-10-2018 JO41_00320 bbb96a941b20e6f88d8588c31681c51a 347 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 107 287 7.6E-23 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 JO41_08880 9e3999ba9ac1d2afbba98f8139fb2797 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.0E-114 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 JO41_08880 9e3999ba9ac1d2afbba98f8139fb2797 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO41_08880 9e3999ba9ac1d2afbba98f8139fb2797 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 135 1.9E-46 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO41_08880 9e3999ba9ac1d2afbba98f8139fb2797 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 151 245 1.1E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO41_08880 9e3999ba9ac1d2afbba98f8139fb2797 264 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO41_08880 9e3999ba9ac1d2afbba98f8139fb2797 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 185 262 3.9E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_08880 9e3999ba9ac1d2afbba98f8139fb2797 264 SUPERFAMILY SSF117143 92 224 7.06E-33 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JO41_06230 ac0207db6f34e96cc45384a390813189 479 SUPERFAMILY SSF116726 402 474 1.96E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_06230 ac0207db6f34e96cc45384a390813189 479 Pfam PF02080 TrkA-C domain 409 474 9.2E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO41_06230 ac0207db6f34e96cc45384a390813189 479 Gene3D G3DSA:1.20.1530.20 1 387 1.2E-25 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JO41_06230 ac0207db6f34e96cc45384a390813189 479 Pfam PF00999 Sodium/hydrogen exchanger family 8 379 7.9E-55 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JO41_06230 ac0207db6f34e96cc45384a390813189 479 Gene3D G3DSA:3.30.70.1450 397 475 3.1E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_11160 c3f74bbfc2f1084656066739a921b179 301 Gene3D G3DSA:3.40.1090.10 107 268 1.7E-14 T 14-10-2018 JO41_11160 c3f74bbfc2f1084656066739a921b179 301 SUPERFAMILY SSF52151 1 262 4.97E-44 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JO41_11160 c3f74bbfc2f1084656066739a921b179 301 Gene3D G3DSA:3.40.1090.20 2 106 9.3E-16 T 14-10-2018 JO41_11160 c3f74bbfc2f1084656066739a921b179 301 Pfam PF01734 Patatin-like phospholipase 5 188 1.5E-23 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 SUPERFAMILY SSF52490 18 213 2.49E-67 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 Gene3D G3DSA:3.30.1330.20 230 354 4.0E-32 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 14 386 35.35 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 ProSitePatterns PS01135 FtsZ protein signature 2. 102 123 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 19 178 3.9E-40 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 SMART SM00864 18 210 2.9E-106 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 SUPERFAMILY SSF55307 209 327 2.2E-33 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 SMART SM00865 212 333 6.0E-37 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 Gene3D G3DSA:3.40.50.1440 14 225 4.5E-75 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 Pfam PF12327 FtsZ family, C-terminal domain 227 324 6.0E-21 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 ProSitePatterns PS01134 FtsZ protein signature 1. 49 83 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 335 6.4E-119 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 PRINTS PR00423 Cell division protein FtsZ signature 194 216 1.8E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 PRINTS PR00423 Cell division protein FtsZ signature 217 238 1.8E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 PRINTS PR00423 Cell division protein FtsZ signature 131 152 1.8E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO41_01185 fcd5abde4ff6eb27394cafb3b06c2d2f 427 PRINTS PR00423 Cell division protein FtsZ signature 103 123 1.8E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JO41_02385 582373929d44b7edcf0e0da0f4b5cb5e 149 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 61 4.2E-13 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 JO41_02385 582373929d44b7edcf0e0da0f4b5cb5e 149 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 66 129 5.6E-21 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 JO41_02385 582373929d44b7edcf0e0da0f4b5cb5e 149 Gene3D G3DSA:1.10.60.10 71 126 8.7E-19 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JO41_02385 582373929d44b7edcf0e0da0f4b5cb5e 149 Gene3D G3DSA:1.10.10.10 5 70 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_02385 582373929d44b7edcf0e0da0f4b5cb5e 149 SMART SM00529 27 126 8.2E-30 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 JO41_02385 582373929d44b7edcf0e0da0f4b5cb5e 149 SUPERFAMILY SSF46785 6 65 1.09E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_02385 582373929d44b7edcf0e0da0f4b5cb5e 149 SUPERFAMILY SSF47979 66 132 7.72E-19 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JO41_00440 7a5f8aa7b0d2fb1a6fff9844ce534ccc 427 Gene3D G3DSA:3.40.190.10 23 421 1.5E-67 T 14-10-2018 JO41_00440 7a5f8aa7b0d2fb1a6fff9844ce534ccc 427 SUPERFAMILY SSF53850 24 423 3.3E-63 T 14-10-2018 JO41_00440 7a5f8aa7b0d2fb1a6fff9844ce534ccc 427 Pfam PF13416 Bacterial extracellular solute-binding protein 59 342 1.1E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_09710 4e50319ee77f9b740915c10c9a9aab92 125 SUPERFAMILY SSF54427 3 116 1.49E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily JO41_09710 4e50319ee77f9b740915c10c9a9aab92 125 Gene3D G3DSA:3.10.450.50 2 119 1.2E-21 T 14-10-2018 JO41_05195 8ee37b5c8338cba3cf053fe19eafb074 349 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 7 341 7.8E-156 T 14-10-2018 IPR026366 Putative selenium metabolism protein, YedE family JO41_05195 8ee37b5c8338cba3cf053fe19eafb074 349 Pfam PF04143 Sulphur transport 206 316 2.2E-8 T 14-10-2018 IPR007272 Sulphur transport domain JO41_10545 77654bf47c573334e8dfc12b46caba29 299 SUPERFAMILY SSF51445 86 273 2.29E-12 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_10545 77654bf47c573334e8dfc12b46caba29 299 Gene3D G3DSA:3.20.20.80 91 299 2.1E-5 T 14-10-2018 JO41_00755 a249e505373a0d7701affa409d134e12 233 Pfam PF10895 Domain of unknown function (DUF2715) 77 229 5.4E-8 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 SMART SM00829 23 350 0.0014 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 Pfam PF00107 Zinc-binding dehydrogenase 177 269 9.1E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 128 2.1E-13 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 SUPERFAMILY SSF50129 1 182 2.36E-46 T 14-10-2018 IPR011032 GroES-like superfamily JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 Gene3D G3DSA:3.90.180.10 18 338 2.5E-105 T 14-10-2018 JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 Gene3D G3DSA:3.40.50.720 162 292 2.5E-105 T 14-10-2018 JO41_00510 fae9d00eb4e56c2cebd5d5841a74f66d 351 SUPERFAMILY SSF51735 142 309 1.55E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_05600 fd3d1aa5487a6a22c1ffb8d08db90f37 289 Gene3D G3DSA:3.40.1130.10 47 219 3.2E-11 T 14-10-2018 JO41_05600 fd3d1aa5487a6a22c1ffb8d08db90f37 289 Pfam PF01553 Acyltransferase 68 193 2.7E-5 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO41_05600 fd3d1aa5487a6a22c1ffb8d08db90f37 289 SUPERFAMILY SSF69593 35 284 8.63E-31 T 14-10-2018 JO41_05600 fd3d1aa5487a6a22c1ffb8d08db90f37 289 SMART SM00563 77 221 1.9E-4 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO41_12350 d0ceba88a4d95f5fceea203a63e0224d 232 Gene3D G3DSA:3.10.620.30 1 143 2.1E-19 T 14-10-2018 JO41_12350 d0ceba88a4d95f5fceea203a63e0224d 232 SUPERFAMILY SSF54001 16 141 2.24E-22 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO41_12350 d0ceba88a4d95f5fceea203a63e0224d 232 SMART SM00460 62 136 2.0E-6 T 14-10-2018 IPR002931 Transglutaminase-like JO41_12350 d0ceba88a4d95f5fceea203a63e0224d 232 Pfam PF01841 Transglutaminase-like superfamily 28 133 5.6E-19 T 14-10-2018 IPR002931 Transglutaminase-like JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 8.7E-19 T 14-10-2018 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 8.7E-19 T 14-10-2018 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.7E-19 T 14-10-2018 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 8.7E-19 T 14-10-2018 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 SUPERFAMILY SSF51905 1 329 7.58E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 296 314 2.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 260 281 2.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 117 125 2.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 159 183 2.4E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 308 2.2E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JO41_01040 9481bd2d6968a7eb190109166b32d585 476 Gene3D G3DSA:3.50.50.60 131 266 1.9E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_01040 9481bd2d6968a7eb190109166b32d585 476 Gene3D G3DSA:3.50.50.60 5 309 1.9E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 SUPERFAMILY SSF51445 148 591 3.58E-134 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 SUPERFAMILY SSF81296 8 160 5.04E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 Gene3D G3DSA:2.60.40.10 1 131 1.7E-35 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 Gene3D G3DSA:2.60.40.1180 604 714 1.6E-22 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 9 689 5.2E-232 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 Pfam PF00128 Alpha amylase, catalytic domain 328 545 1.4E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 Pfam PF00128 Alpha amylase, catalytic domain 190 314 1.4E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 SUPERFAMILY SSF51011 607 713 3.81E-18 T 14-10-2018 JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 SMART SM00642 168 584 7.2E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 Gene3D G3DSA:3.20.20.80 149 598 5.7E-188 T 14-10-2018 JO41_03390 b3ae34bd1cfe05ae8ed1050557494f03 714 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 15 105 6.2E-12 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JO41_01435 335f881f71150a5c58285ea0fb7fa7a5 458 PIRSF PIRSF006603 6 458 2.9E-72 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_01435 335f881f71150a5c58285ea0fb7fa7a5 458 Pfam PF01554 MatE 251 409 1.3E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_01435 335f881f71150a5c58285ea0fb7fa7a5 458 Pfam PF01554 MatE 31 190 1.7E-15 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_01435 335f881f71150a5c58285ea0fb7fa7a5 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 414 9.9E-49 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 18 102 1.1E-9 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 SUPERFAMILY SSF81296 18 106 5.04E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 Gene3D G3DSA:3.20.20.80 126 571 4.2E-158 T 14-10-2018 JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 Gene3D G3DSA:2.60.40.1180 604 685 1.8E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 SUPERFAMILY SSF51445 137 561 2.57E-111 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 SMART SM00642 148 553 5.2E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 Gene3D G3DSA:2.60.40.10 7 120 2.6E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_09250 518e52bc8d94f9f11f56327eac1b278d 685 Pfam PF00128 Alpha amylase, catalytic domain 167 271 6.5E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JO41_02205 6132d7bce9b9ed57781eabe2e754b713 340 Pfam PF03524 Conjugal transfer protein 123 334 4.7E-47 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX JO41_02205 6132d7bce9b9ed57781eabe2e754b713 340 Gene3D G3DSA:2.60.40.2500 238 338 1.9E-14 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily JO41_05720 d6c197868371900a33ac70731975dc17 311 Gene3D G3DSA:1.10.3720.10 55 307 5.8E-47 T 14-10-2018 IPR035906 MetI-like superfamily JO41_05720 d6c197868371900a33ac70731975dc17 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 301 1.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_05720 d6c197868371900a33ac70731975dc17 311 SUPERFAMILY SSF161098 55 301 3.18E-53 T 14-10-2018 IPR035906 MetI-like superfamily JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 Gene3D G3DSA:3.30.420.40 3 312 6.0E-116 T 14-10-2018 JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.7E-44 T 14-10-2018 IPR017861 Kae1/TsaD family JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 2.7E-44 T 14-10-2018 IPR017861 Kae1/TsaD family JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 2.7E-44 T 14-10-2018 IPR017861 Kae1/TsaD family JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.7E-44 T 14-10-2018 IPR017861 Kae1/TsaD family JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.7E-44 T 14-10-2018 IPR017861 Kae1/TsaD family JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 2.7E-44 T 14-10-2018 IPR017861 Kae1/TsaD family JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 5.8E-123 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 58.982 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 5.6E-105 T 14-10-2018 IPR017861 Kae1/TsaD family JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 Gene3D G3DSA:3.30.420.40 128 293 6.0E-116 T 14-10-2018 JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 SUPERFAMILY SSF53067 1 307 6.62E-38 T 14-10-2018 JO41_11570 2f58be008eab8c0074e64ca17fd48ae2 340 Pfam PF00814 Glycoprotease family 23 306 6.7E-92 T 14-10-2018 IPR000905 Gcp-like domain JO41_06790 59af72f02906adaaf083b59a6e93a104 157 Pfam PF13310 Virulence protein RhuM family 63 130 3.5E-13 T 14-10-2018 IPR011204 Virulence protein RhuM-like JO41_05315 be5f0ec3a95c7f9ddaa33c04359546cd 305 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 22 36 1.7E-26 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_05315 be5f0ec3a95c7f9ddaa33c04359546cd 305 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 231 248 1.7E-26 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_05315 be5f0ec3a95c7f9ddaa33c04359546cd 305 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 92 112 1.7E-26 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_05315 be5f0ec3a95c7f9ddaa33c04359546cd 305 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 250 268 1.7E-26 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_05315 be5f0ec3a95c7f9ddaa33c04359546cd 305 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 273 293 1.7E-26 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_05315 be5f0ec3a95c7f9ddaa33c04359546cd 305 SUPERFAMILY SSF53335 3 294 1.52E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_05315 be5f0ec3a95c7f9ddaa33c04359546cd 305 Pfam PF01555 DNA methylase 23 288 3.4E-43 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JO41_12540 353946a0bfbb41a09f029c487cb30ce6 94 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 10 76 4.8E-6 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 JO41_12540 353946a0bfbb41a09f029c487cb30ce6 94 Pfam PF09827 CRISPR associated protein Cas2 2 66 3.4E-6 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 JO41_03600 a83d77b0743508cda05885476a5b7b69 492 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 329 491 1.3E-17 T 14-10-2018 IPR003872 Major outer sheath protein, C-terminal JO41_03600 a83d77b0743508cda05885476a5b7b69 492 Pfam PF02707 Major Outer Sheath Protein N-terminal region 80 318 1.4E-21 T 14-10-2018 IPR003857 Major outer sheath protein, N-terminal JO41_12660 c458673f1a0c9305c3beb2a8fa47b12c 270 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 116 235 2.0E-38 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal JO41_12660 c458673f1a0c9305c3beb2a8fa47b12c 270 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 11 249 1.8E-66 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 JO41_12660 c458673f1a0c9305c3beb2a8fa47b12c 270 Gene3D G3DSA:3.40.1700.10 101 254 6.3E-51 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily JO41_12660 c458673f1a0c9305c3beb2a8fa47b12c 270 SUPERFAMILY SSF143597 45 240 3.01E-56 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily JO41_12660 c458673f1a0c9305c3beb2a8fa47b12c 270 PIRSF PIRSF004793 6 267 6.3E-82 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 JO41_12660 c458673f1a0c9305c3beb2a8fa47b12c 270 Hamap MF_01499 Diadenylate cyclase [dacA]. 7 254 29.69 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 JO41_07640 aedfa9da4aa513d0919a1b528383a84a 237 SUPERFAMILY SSF51306 40 237 1.57E-30 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JO41_07640 aedfa9da4aa513d0919a1b528383a84a 237 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 26 231 1.1E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_07640 aedfa9da4aa513d0919a1b528383a84a 237 Gene3D G3DSA:2.10.109.10 110 237 8.0E-25 T 14-10-2018 JO41_07640 aedfa9da4aa513d0919a1b528383a84a 237 Pfam PF10502 Signal peptidase, peptidase S26 118 224 1.0E-4 T 14-10-2018 IPR019533 Peptidase S26 JO41_07640 aedfa9da4aa513d0919a1b528383a84a 237 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 41 57 5.7E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_07640 aedfa9da4aa513d0919a1b528383a84a 237 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 124 136 5.7E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_07640 aedfa9da4aa513d0919a1b528383a84a 237 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 190 209 5.7E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JO41_01440 b4c8772fc4121155ca188a98aa4cea0f 449 Pfam PF03841 L-seryl-tRNA selenium transferase 78 426 2.2E-99 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JO41_01440 b4c8772fc4121155ca188a98aa4cea0f 449 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 6 441 1.1E-144 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JO41_01440 b4c8772fc4121155ca188a98aa4cea0f 449 Gene3D G3DSA:3.40.640.10 90 345 9.2E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_01440 b4c8772fc4121155ca188a98aa4cea0f 449 SUPERFAMILY SSF53383 69 442 8.23E-41 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_01440 b4c8772fc4121155ca188a98aa4cea0f 449 Gene3D G3DSA:3.90.1150.110 7 430 9.2E-129 T 14-10-2018 JO41_01440 b4c8772fc4121155ca188a98aa4cea0f 449 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 445 152.933 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JO41_09390 3c34f4c56dc30a648d2ac7fa9e5823cd 229 SUPERFAMILY SSF52218 4 177 5.12E-21 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_09390 3c34f4c56dc30a648d2ac7fa9e5823cd 229 Gene3D G3DSA:3.40.50.360 3 227 1.5E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_09390 3c34f4c56dc30a648d2ac7fa9e5823cd 229 Pfam PF03358 NADPH-dependent FMN reductase 1 140 4.0E-14 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 PRINTS PR00690 Adhesin family signature 65 78 8.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 PRINTS PR00690 Adhesin family signature 78 95 8.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 PRINTS PR00690 Adhesin family signature 34 52 8.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 PRINTS PR00691 Adhesin B signature 34 55 5.1E-12 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 PRINTS PR00691 Adhesin B signature 302 320 5.1E-12 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 PRINTS PR00691 Adhesin B signature 59 77 5.1E-12 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 PRINTS PR00691 Adhesin B signature 78 97 5.1E-12 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 Gene3D G3DSA:3.40.50.1980 143 216 2.9E-21 T 14-10-2018 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 Gene3D G3DSA:3.40.50.1980 25 142 1.2E-27 T 14-10-2018 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 321 5.4E-69 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 SUPERFAMILY SSF53807 33 323 1.41E-81 T 14-10-2018 JO41_03655 99b65d14205bc562ba5a7f6a1bb0215b 325 Gene3D G3DSA:3.40.50.1980 217 325 9.8E-30 T 14-10-2018 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 SMART SM01228 557 628 1.2E-32 T 14-10-2018 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 Pfam PF13932 GidA associated domain 418 627 7.6E-64 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 631 37.647 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 Gene3D G3DSA:3.50.50.60 1 235 2.1E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 Gene3D G3DSA:3.50.50.60 311 475 1.2E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 630 2.0E-233 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 Pfam PF01134 Glucose inhibited division protein A 9 405 1.6E-145 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 377 400 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 SUPERFAMILY SSF51905 7 270 5.56E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 282 296 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 JO41_06000 7ce089114a82cbd6c6e337ef3d10ea1e 631 Gene3D G3DSA:1.10.150.570 580 631 9.7E-21 T 14-10-2018 JO41_10655 30f0962a0d86c9d5e6bcff57141464a8 158 Pfam PF03692 Putative zinc- or iron-chelating domain 15 117 4.4E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein JO41_12210 32ecb5d4c7d27cdf2910a10e39902774 485 Pfam PF01940 Integral membrane protein DUF92 236 472 2.1E-54 T 14-10-2018 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 JO41_08850 9dc7ab845486fcf6938152562fe9bb98 332 Pfam PF06166 Protein of unknown function (DUF979) 14 332 8.7E-110 T 14-10-2018 IPR009323 Protein of unknown function DUF979 JO41_05505 26e189a54916dc182cbab802e6952aaa 456 Pfam PF00919 Uncharacterized protein family UPF0004 2 100 1.2E-25 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JO41_05505 26e189a54916dc182cbab802e6952aaa 456 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 2 452 1.0E-169 T 14-10-2018 JO41_05505 26e189a54916dc182cbab802e6952aaa 456 SUPERFAMILY SSF102114 142 384 7.85E-57 T 14-10-2018 JO41_05505 26e189a54916dc182cbab802e6952aaa 456 Pfam PF01938 TRAM domain 392 453 6.1E-7 T 14-10-2018 IPR002792 TRAM domain JO41_05505 26e189a54916dc182cbab802e6952aaa 456 Pfam PF04055 Radical SAM superfamily 159 337 7.0E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_05505 26e189a54916dc182cbab802e6952aaa 456 Gene3D G3DSA:3.40.50.12160 1 130 1.1E-29 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily JO41_05505 26e189a54916dc182cbab802e6952aaa 456 Gene3D G3DSA:3.80.30.20 154 394 4.4E-86 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JO41_05505 26e189a54916dc182cbab802e6952aaa 456 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 450 5.9E-142 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 JO41_05505 26e189a54916dc182cbab802e6952aaa 456 SMART SM00729 155 377 1.3E-57 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JO41_05505 26e189a54916dc182cbab802e6952aaa 456 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 159 179 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JO41_12675 bd482f20c1d628dad544d3a6a760b79b 114 Gene3D G3DSA:3.40.1350.10 25 110 2.4E-8 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JO41_09750 15c4b0857ff570157a5db787bd255163 106 Pfam PF01381 Helix-turn-helix 43 87 8.6E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JO41_09750 15c4b0857ff570157a5db787bd255163 106 SUPERFAMILY SSF47413 43 97 2.2E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JO41_09750 15c4b0857ff570157a5db787bd255163 106 Gene3D G3DSA:1.10.260.40 7 97 2.9E-14 T 14-10-2018 JO41_04310 9d0026081861668d5f9a8c4722530f49 432 SUPERFAMILY SSF56112 6 417 1.12E-67 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JO41_04310 9d0026081861668d5f9a8c4722530f49 432 Gene3D G3DSA:3.30.200.20 1 113 3.4E-33 T 14-10-2018 JO41_04310 9d0026081861668d5f9a8c4722530f49 432 Pfam PF01636 Phosphotransferase enzyme family 31 292 2.3E-6 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase JO41_04310 9d0026081861668d5f9a8c4722530f49 432 Gene3D G3DSA:3.90.1200.10 116 426 8.6E-85 T 14-10-2018 JO41_04310 9d0026081861668d5f9a8c4722530f49 432 PIRSF PIRSF031134 1 427 2.0E-119 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 JO41_11300 eb142e3b44fbc0312de4f397a392e509 336 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 32 327 1.8E-73 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JO41_11300 eb142e3b44fbc0312de4f397a392e509 336 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 236 242 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_11300 eb142e3b44fbc0312de4f397a392e509 336 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 178 1.4E-34 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 JO41_11300 eb142e3b44fbc0312de4f397a392e509 336 SUPERFAMILY SSF53335 29 327 1.55E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_11300 eb142e3b44fbc0312de4f397a392e509 336 Gene3D G3DSA:3.40.50.150 92 334 1.2E-50 T 14-10-2018 JO41_11300 eb142e3b44fbc0312de4f397a392e509 336 Gene3D G3DSA:1.10.8.10 14 91 7.0E-17 T 14-10-2018 JO41_04840 63bb49cee692f7baee539e576d5415a8 612 Pfam PF00664 ABC transporter transmembrane region 34 303 3.2E-43 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_04840 63bb49cee692f7baee539e576d5415a8 612 Gene3D G3DSA:3.40.50.300 357 606 6.8E-89 T 14-10-2018 JO41_04840 63bb49cee692f7baee539e576d5415a8 612 Pfam PF00005 ABC transporter 377 526 1.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04840 63bb49cee692f7baee539e576d5415a8 612 SUPERFAMILY SSF90123 14 332 1.83E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_04840 63bb49cee692f7baee539e576d5415a8 612 SUPERFAMILY SSF52540 352 597 4.55E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04840 63bb49cee692f7baee539e576d5415a8 612 SMART SM00382 386 572 9.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04840 63bb49cee692f7baee539e576d5415a8 612 Gene3D G3DSA:1.20.1560.10 2 335 3.8E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_01515 29727bdb83f3d5cd5ad58673f5082bc1 159 SUPERFAMILY SSF53098 1 156 1.64E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_01515 29727bdb83f3d5cd5ad58673f5082bc1 159 Pfam PF00075 RNase H 2 155 8.6E-45 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 JO41_01515 29727bdb83f3d5cd5ad58673f5082bc1 159 Gene3D G3DSA:3.30.420.10 1 159 1.4E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_01515 29727bdb83f3d5cd5ad58673f5082bc1 159 Hamap MF_00042 Ribonuclease H [rnhA]. 1 159 31.118 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 JO41_03730 94220d6ccb3b2bda94dd7192d8465c4e 138 Pfam PF06803 Protein of unknown function (DUF1232) 72 105 5.6E-12 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 JO41_02960 ab04ed2694334261f3facbe39ae890f8 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 293 2.1E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 Gene3D G3DSA:3.30.1390.30 78 153 1.0E-39 T 14-10-2018 JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 SUPERFAMILY SSF56519 51 243 2.88E-43 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 Gene3D G3DSA:3.40.710.10 239 599 2.1E-91 T 14-10-2018 JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 226 7.5E-45 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 572 7.2E-65 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 SUPERFAMILY SSF56601 244 583 3.19E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 Gene3D G3DSA:3.90.1310.10 56 227 1.0E-39 T 14-10-2018 JO41_10715 5b7216029a219423d19ad00dc9859e1c 617 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 12 592 6.0E-188 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 197 212 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 70 268 1.8E-88 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 107 2.7E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 68 87 2.7E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 242 267 2.7E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 107 126 2.7E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 239 2.7E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 197 217 2.7E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 66 75 3.4E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 152 3.4E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 138 3.4E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 258 268 3.4E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 168 180 3.4E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 190 202 3.4E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 Pfam PF00813 FliP family 70 264 2.5E-72 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_09480 cc8ea44267b39546b62ab2ba9b5479b3 269 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 245 257 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JO41_05895 b00ec78979eeaa7df55520a95b6d41ff 322 Gene3D G3DSA:3.90.25.10 172 305 7.0E-108 T 14-10-2018 JO41_05895 b00ec78979eeaa7df55520a95b6d41ff 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 9.0E-47 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JO41_05895 b00ec78979eeaa7df55520a95b6d41ff 322 Gene3D G3DSA:3.40.50.720 3 251 7.0E-108 T 14-10-2018 JO41_05895 b00ec78979eeaa7df55520a95b6d41ff 322 SUPERFAMILY SSF51735 1 321 2.48E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_05895 b00ec78979eeaa7df55520a95b6d41ff 322 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 319 1.5E-105 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 JO41_08820 c276125d131ba4a239996c6a246f0f23 458 Pfam PF00171 Aldehyde dehydrogenase family 7 430 2.0E-83 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JO41_08820 c276125d131ba4a239996c6a246f0f23 458 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 211 218 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JO41_08820 c276125d131ba4a239996c6a246f0f23 458 Gene3D G3DSA:3.40.605.10 15 430 1.3E-172 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JO41_08820 c276125d131ba4a239996c6a246f0f23 458 PIRSF PIRSF036492 1 458 3.8E-184 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JO41_08820 c276125d131ba4a239996c6a246f0f23 458 Gene3D G3DSA:3.40.309.10 215 410 1.3E-172 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JO41_08820 c276125d131ba4a239996c6a246f0f23 458 SUPERFAMILY SSF53720 7 446 1.96E-123 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JO41_06725 8a1ccee2892374428b9e1b945c3d192f 189 Pfam PF00364 Biotin-requiring enzyme 114 187 1.3E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JO41_06725 8a1ccee2892374428b9e1b945c3d192f 189 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 71 188 3.0E-36 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO41_06725 8a1ccee2892374428b9e1b945c3d192f 189 Gene3D G3DSA:2.40.50.100 111 187 6.6E-28 T 14-10-2018 JO41_06725 8a1ccee2892374428b9e1b945c3d192f 189 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 4.2E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO41_06725 8a1ccee2892374428b9e1b945c3d192f 189 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 149 162 4.2E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO41_06725 8a1ccee2892374428b9e1b945c3d192f 189 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 134 148 4.2E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JO41_06725 8a1ccee2892374428b9e1b945c3d192f 189 SUPERFAMILY SSF51230 111 187 4.45E-23 T 14-10-2018 IPR011053 Single hybrid motif JO41_09945 e522384d05275db34a2bfa7b85647f3a 273 Pfam PF13189 Cytidylate kinase-like family 3 167 1.0E-34 T 14-10-2018 JO41_09945 e522384d05275db34a2bfa7b85647f3a 273 Gene3D G3DSA:3.40.50.300 1 185 5.7E-40 T 14-10-2018 JO41_09780 7358c05225f3780910e7661b00534805 655 SUPERFAMILY SSF47819 577 652 9.16E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 JO41_09780 7358c05225f3780910e7661b00534805 655 Pfam PF00270 DEAD/DEAH box helicase 26 189 2.6E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JO41_09780 7358c05225f3780910e7661b00534805 655 Pfam PF16124 RecQ zinc-binding 343 430 2.8E-10 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JO41_09780 7358c05225f3780910e7661b00534805 655 Pfam PF09382 RQC domain 437 539 4.7E-30 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 JO41_09780 7358c05225f3780910e7661b00534805 655 Pfam PF00271 Helicase conserved C-terminal domain 225 330 9.5E-21 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_09780 7358c05225f3780910e7661b00534805 655 Gene3D G3DSA:3.40.50.300 2 208 2.4E-77 T 14-10-2018 JO41_09780 7358c05225f3780910e7661b00534805 655 Gene3D G3DSA:1.10.10.10 436 545 2.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_09780 7358c05225f3780910e7661b00534805 655 SMART SM00341 580 653 8.2E-10 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JO41_09780 7358c05225f3780910e7661b00534805 655 Gene3D G3DSA:3.40.50.300 209 435 5.8E-59 T 14-10-2018 JO41_09780 7358c05225f3780910e7661b00534805 655 SMART SM00956 438 540 2.5E-38 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 JO41_09780 7358c05225f3780910e7661b00534805 655 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 14 489 9.8E-156 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 JO41_09780 7358c05225f3780910e7661b00534805 655 SMART SM00490 250 331 4.6E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JO41_09780 7358c05225f3780910e7661b00534805 655 SMART SM00487 20 218 8.2E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JO41_09780 7358c05225f3780910e7661b00534805 655 Pfam PF00570 HRDC domain 584 650 4.8E-18 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JO41_09780 7358c05225f3780910e7661b00534805 655 Gene3D G3DSA:1.10.150.80 580 653 4.1E-21 T 14-10-2018 JO41_09780 7358c05225f3780910e7661b00534805 655 SUPERFAMILY SSF52540 63 351 9.5E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09780 7358c05225f3780910e7661b00534805 655 SUPERFAMILY SSF46785 433 548 4.08E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_01035 668448c9bb6ddc5d5de08f614039e557 584 Gene3D G3DSA:3.30.9.10 175 409 8.8E-101 T 14-10-2018 JO41_01035 668448c9bb6ddc5d5de08f614039e557 584 Gene3D G3DSA:1.10.10.1100 480 561 2.8E-20 T 14-10-2018 JO41_01035 668448c9bb6ddc5d5de08f614039e557 584 Pfam PF01266 FAD dependent oxidoreductase 92 447 9.5E-59 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JO41_01035 668448c9bb6ddc5d5de08f614039e557 584 SUPERFAMILY SSF51905 90 498 4.53E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_01035 668448c9bb6ddc5d5de08f614039e557 584 Pfam PF04324 BFD-like [2Fe-2S] binding domain 494 551 6.7E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JO41_01035 668448c9bb6ddc5d5de08f614039e557 584 Gene3D G3DSA:3.50.50.60 92 443 8.8E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 Pfam PF00155 Aminotransferase class I and II 312 604 5.9E-38 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 SUPERFAMILY SSF53383 267 609 1.46E-55 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 460 473 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 Pfam PF12804 MobA-like NTP transferase domain 3 128 8.4E-13 T 14-10-2018 IPR025877 MobA-like NTP transferase JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 SUPERFAMILY SSF53448 1 247 1.71E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 Gene3D G3DSA:3.90.550.10 1 250 4.2E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 Gene3D G3DSA:3.90.1150.10 273 604 7.1E-76 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_00080 844f4b7f3a102c705ba3075d8c742df9 610 Gene3D G3DSA:3.40.640.10 283 509 7.1E-76 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_08460 8159b22ceff60df99cca79151ebd372f 647 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 114 323 1.7E-9 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JO41_08460 8159b22ceff60df99cca79151ebd372f 647 SUPERFAMILY SSF51445 110 408 2.53E-47 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_08460 8159b22ceff60df99cca79151ebd372f 647 Gene3D G3DSA:1.20.120.670 419 644 2.8E-55 T 14-10-2018 JO41_08460 8159b22ceff60df99cca79151ebd372f 647 Gene3D G3DSA:3.20.20.80 109 413 1.5E-71 T 14-10-2018 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 PRINTS PR00974 Ribosomal protein S18 family signature 90 100 1.3E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 PRINTS PR00974 Ribosomal protein S18 family signature 68 75 1.3E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 PRINTS PR00974 Ribosomal protein S18 family signature 76 90 1.3E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 PRINTS PR00974 Ribosomal protein S18 family signature 58 68 1.3E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 51 101 4.0E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 TIGRFAM TIGR00165 S18: ribosomal protein bS18 36 103 3.3E-34 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 ProSitePatterns PS00057 Ribosomal protein S18 signature. 51 74 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 Gene3D G3DSA:4.10.640.10 23 103 1.8E-31 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 SUPERFAMILY SSF46911 31 103 5.1E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 Pfam PF01084 Ribosomal protein S18 48 98 6.6E-28 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11780 60e8ac71112bd541a00a6129849adaae 103 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 27 103 22.645 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03395 2dfab5006d3956d1e36779a1b8118daf 816 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 648 660 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JO41_03395 2dfab5006d3956d1e36779a1b8118daf 816 Gene3D G3DSA:3.40.50.2000 462 795 0.0 T 14-10-2018 JO41_03395 2dfab5006d3956d1e36779a1b8118daf 816 SUPERFAMILY SSF53756 5 814 0.0 T 14-10-2018 JO41_03395 2dfab5006d3956d1e36779a1b8118daf 816 PIRSF PIRSF000460 1 816 1.6E-240 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JO41_03395 2dfab5006d3956d1e36779a1b8118daf 816 Gene3D G3DSA:3.40.50.2000 19 811 0.0 T 14-10-2018 JO41_03395 2dfab5006d3956d1e36779a1b8118daf 816 Pfam PF00343 Carbohydrate phosphorylase 94 810 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JO41_03395 2dfab5006d3956d1e36779a1b8118daf 816 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 6 810 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JO41_09600 91ffd79fbdc065a0b593abb5679eb72a 480 Pfam PF01973 Protein of unknown function DUF115 162 303 6.8E-12 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 Gene3D G3DSA:3.40.50.300 378 600 5.0E-96 T 14-10-2018 JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 SUPERFAMILY SSF90123 15 319 2.22E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 Pfam PF00005 ABC transporter 378 526 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 SMART SM00382 386 572 6.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 Gene3D G3DSA:1.20.1560.10 12 318 3.9E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 Pfam PF00664 ABC transporter transmembrane region 32 284 4.2E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_02555 c882d4c96c7b0016a6b059a9e456d825 604 SUPERFAMILY SSF52540 365 596 2.5E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_01045 15425bc504cd605450665aeaeab099a0 135 Pfam PF07892 Protein of unknown function (DUF1667) 35 124 7.3E-14 T 14-10-2018 IPR012460 Protein of unknown function DUF1667 JO41_01045 15425bc504cd605450665aeaeab099a0 135 SUPERFAMILY SSF160148 47 124 6.67E-9 T 14-10-2018 IPR036593 CPE0013-like superfamily JO41_10670 bbb87017c1dcf14890853d82b04ed5a9 338 Gene3D G3DSA:1.10.8.1150 37 105 8.1E-9 T 14-10-2018 JO41_10670 bbb87017c1dcf14890853d82b04ed5a9 338 Pfam PF02618 YceG-like family 41 327 2.1E-72 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JO41_10670 bbb87017c1dcf14890853d82b04ed5a9 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 328 8.7E-73 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JO41_10670 bbb87017c1dcf14890853d82b04ed5a9 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 334 29.076 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JO41_08920 c47e8f4663f3b310bcec7402bfaa3222 216 SUPERFAMILY SSF51182 121 214 1.06E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO41_08920 c47e8f4663f3b310bcec7402bfaa3222 216 Pfam PF07883 Cupin domain 147 214 5.1E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel JO41_08920 c47e8f4663f3b310bcec7402bfaa3222 216 SUPERFAMILY SSF51182 4 96 6.04E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO41_08920 c47e8f4663f3b310bcec7402bfaa3222 216 Gene3D G3DSA:2.60.120.10 108 212 2.4E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_08920 c47e8f4663f3b310bcec7402bfaa3222 216 Gene3D G3DSA:2.60.120.10 1 102 2.8E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_07900 877b92ecd4106696f5885935126e4f96 229 Pfam PF07505 Protein of unknown function (DUF5131) 11 198 7.4E-27 T 14-10-2018 IPR011101 Protein of unknown function DUF5131 JO41_07900 877b92ecd4106696f5885935126e4f96 229 TIGRFAM TIGR04471 rSAM_mob_pairA: radical SAM mobile pair protein A 3 221 7.8E-128 T 14-10-2018 IPR031010 Radical SAM mobile pair protein A JO41_09905 db3f73aa553e50fde45c7a127a9153eb 264 SUPERFAMILY SSF53067 5 255 1.92E-37 T 14-10-2018 JO41_09905 db3f73aa553e50fde45c7a127a9153eb 264 Gene3D G3DSA:3.30.420.40 6 255 1.0E-84 T 14-10-2018 JO41_09905 db3f73aa553e50fde45c7a127a9153eb 264 Gene3D G3DSA:3.30.420.40 98 238 1.0E-84 T 14-10-2018 JO41_09905 db3f73aa553e50fde45c7a127a9153eb 264 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 255 2.6E-67 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JO41_09905 db3f73aa553e50fde45c7a127a9153eb 264 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 5 253 1.3E-81 T 14-10-2018 IPR008275 CoA enzyme activase JO41_05325 4ff33b23fed5a8caa8d490644431399f 152 Gene3D G3DSA:3.40.630.30 4 148 1.3E-27 T 14-10-2018 JO41_05325 4ff33b23fed5a8caa8d490644431399f 152 Pfam PF00583 Acetyltransferase (GNAT) family 19 141 1.9E-11 T 14-10-2018 IPR000182 GNAT domain JO41_05325 4ff33b23fed5a8caa8d490644431399f 152 SUPERFAMILY SSF55729 11 143 1.35E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_11165 70d3312a66b0d4eb5bd58f0b458e7806 126 Pfam PF07009 NusG domain II 16 116 1.8E-14 T 14-10-2018 IPR024045 NusG, domain 2 JO41_11165 70d3312a66b0d4eb5bd58f0b458e7806 126 Gene3D G3DSA:2.60.320.10 32 123 4.8E-16 T 14-10-2018 IPR038690 NusG, domain 2 superfamily JO41_06795 afe77278447f4ca071445cfb32a21875 204 Pfam PF01420 Type I restriction modification DNA specificity domain 21 181 2.4E-14 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JO41_06795 afe77278447f4ca071445cfb32a21875 204 SUPERFAMILY SSF116734 18 196 1.96E-21 T 14-10-2018 JO41_06795 afe77278447f4ca071445cfb32a21875 204 Gene3D G3DSA:3.90.220.20 18 188 8.7E-12 T 14-10-2018 JO41_00795 809bf14b960144b27bcf671df65496bb 308 Gene3D G3DSA:1.10.3720.10 59 308 2.3E-61 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00795 809bf14b960144b27bcf671df65496bb 308 SUPERFAMILY SSF161098 63 291 7.33E-47 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00795 809bf14b960144b27bcf671df65496bb 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 302 6.3E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_04530 b2abf3f50e17c2081a7949a31fb2394c 250 SUPERFAMILY SSF53335 41 249 4.6E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_04530 b2abf3f50e17c2081a7949a31fb2394c 250 Gene3D G3DSA:2.20.25.110 152 208 2.5E-37 T 14-10-2018 JO41_04530 b2abf3f50e17c2081a7949a31fb2394c 250 Gene3D G3DSA:3.40.50.150 43 233 2.5E-37 T 14-10-2018 JO41_04530 b2abf3f50e17c2081a7949a31fb2394c 250 Pfam PF13649 Methyltransferase domain 49 144 2.3E-15 T 14-10-2018 JO41_11215 25551c10462a45c94e62d16488a46833 282 Pfam PF01148 Cytidylyltransferase family 6 279 3.1E-47 T 14-10-2018 JO41_12195 3376f1e661150afe43ecf1f24b9d5052 437 SUPERFAMILY SSF161070 5 433 6.15E-117 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 JO41_12195 3376f1e661150afe43ecf1f24b9d5052 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 6.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_12195 3376f1e661150afe43ecf1f24b9d5052 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 298 317 6.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_12195 3376f1e661150afe43ecf1f24b9d5052 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 373 393 6.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_12195 3376f1e661150afe43ecf1f24b9d5052 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 6.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_12195 3376f1e661150afe43ecf1f24b9d5052 437 Pfam PF00209 Sodium:neurotransmitter symporter family 144 430 3.6E-35 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_12195 3376f1e661150afe43ecf1f24b9d5052 437 Pfam PF00209 Sodium:neurotransmitter symporter family 5 128 1.0E-18 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JO41_05385 bc390d4eeec43be765a1bc206fa1571e 295 SUPERFAMILY SSF56317 2 260 1.22E-47 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO41_05385 bc390d4eeec43be765a1bc206fa1571e 295 Pfam PF00795 Carbon-nitrogen hydrolase 5 197 4.2E-28 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JO41_05385 bc390d4eeec43be765a1bc206fa1571e 295 Gene3D G3DSA:3.60.110.10 1 288 1.1E-54 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO41_02710 22f93ed2f7b150dcedc9935e2483b969 285 SMART SM00283 31 285 5.7E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_02710 22f93ed2f7b150dcedc9935e2483b969 285 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 129 247 1.4E-17 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_02710 22f93ed2f7b150dcedc9935e2483b969 285 SUPERFAMILY SSF58104 37 281 3.92E-38 T 14-10-2018 JO41_02710 22f93ed2f7b150dcedc9935e2483b969 285 Gene3D G3DSA:1.10.287.950 10 285 2.4E-35 T 14-10-2018 JO41_09325 16a0ed8ca69236938579d230fb564ca0 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_09325 16a0ed8ca69236938579d230fb564ca0 202 SUPERFAMILY SSF46689 2 80 3.9E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_09325 16a0ed8ca69236938579d230fb564ca0 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_09325 16a0ed8ca69236938579d230fb564ca0 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_09325 16a0ed8ca69236938579d230fb564ca0 202 Gene3D G3DSA:1.10.357.10 3 191 1.5E-18 T 14-10-2018 JO41_08025 4d4156b5ac34ea60bd4e6ef33fdfddad 277 SMART SM00478 47 195 3.9E-38 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JO41_08025 4d4156b5ac34ea60bd4e6ef33fdfddad 277 SUPERFAMILY SSF48150 12 199 1.11E-51 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JO41_08025 4d4156b5ac34ea60bd4e6ef33fdfddad 277 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 153 2.2E-12 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JO41_08025 4d4156b5ac34ea60bd4e6ef33fdfddad 277 Gene3D G3DSA:1.10.340.30 29 140 4.1E-57 T 14-10-2018 JO41_08025 4d4156b5ac34ea60bd4e6ef33fdfddad 277 Gene3D G3DSA:1.10.1670.10 18 203 4.1E-57 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JO41_08025 4d4156b5ac34ea60bd4e6ef33fdfddad 277 Pfam PF00633 Helix-hairpin-helix motif 107 133 1.3E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 JO41_10560 25b2ccced38d6d7e96a08e4fd5e50f33 282 SUPERFAMILY SSF56176 5 172 3.87E-25 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JO41_10560 25b2ccced38d6d7e96a08e4fd5e50f33 282 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 9 172 6.9E-29 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 JO41_10560 25b2ccced38d6d7e96a08e4fd5e50f33 282 Gene3D G3DSA:3.30.465.10 4 173 1.7E-23 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JO41_01955 1edff80bc71175d3438979f71cd44d6c 358 Gene3D G3DSA:1.10.3720.10 144 355 2.7E-22 T 14-10-2018 IPR035906 MetI-like superfamily JO41_01955 1edff80bc71175d3438979f71cd44d6c 358 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 81 2.6E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JO41_01955 1edff80bc71175d3438979f71cd44d6c 358 SUPERFAMILY SSF161098 150 336 1.44E-28 T 14-10-2018 IPR035906 MetI-like superfamily JO41_01955 1edff80bc71175d3438979f71cd44d6c 358 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 172 353 4.5E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_00235 dc7c59d5a8a7719cb3d5642818236414 124 Pfam PF02021 Uncharacterised protein family UPF0102 10 99 1.3E-25 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 JO41_00235 dc7c59d5a8a7719cb3d5642818236414 124 Gene3D G3DSA:3.40.1350.10 9 123 9.1E-32 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JO41_00235 dc7c59d5a8a7719cb3d5642818236414 124 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 102 1.2E-24 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 JO41_00235 dc7c59d5a8a7719cb3d5642818236414 124 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 114 20.648 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 JO41_00235 dc7c59d5a8a7719cb3d5642818236414 124 SUPERFAMILY SSF52980 5 104 4.93E-22 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO41_10985 f3f910e4046fa5eb810dbd277198bb77 315 Pfam PF00892 EamA-like transporter family 10 141 2.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO41_10985 f3f910e4046fa5eb810dbd277198bb77 315 Pfam PF00892 EamA-like transporter family 155 288 2.2E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO41_10985 f3f910e4046fa5eb810dbd277198bb77 315 SUPERFAMILY SSF103481 45 144 5.23E-10 T 14-10-2018 JO41_10985 f3f910e4046fa5eb810dbd277198bb77 315 SUPERFAMILY SSF103481 210 288 3.14E-10 T 14-10-2018 JO41_01490 7032979f93a2b27ce19d030c49fbe229 491 PIRSF PIRSF012702 2 490 1.2E-133 T 14-10-2018 IPR009197 Microcystin LR degradation protein MlrC JO41_01490 7032979f93a2b27ce19d030c49fbe229 491 Pfam PF07364 Metallopeptidase family M81 6 290 4.8E-95 T 14-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal JO41_01490 7032979f93a2b27ce19d030c49fbe229 491 Pfam PF07171 MlrC C-terminus 303 473 3.9E-49 T 14-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal JO41_07745 bfdf455814658b61ccce9a19c01e086d 351 PIRSF PIRSF005096 1 351 2.1E-124 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 JO41_07745 bfdf455814658b61ccce9a19c01e086d 351 Gene3D G3DSA:2.70.98.10 1 351 2.3E-116 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JO41_07745 bfdf455814658b61ccce9a19c01e086d 351 SUPERFAMILY SSF74650 6 349 8.79E-107 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JO41_07745 bfdf455814658b61ccce9a19c01e086d 351 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 JO41_07745 bfdf455814658b61ccce9a19c01e086d 351 Pfam PF01263 Aldose 1-epimerase 20 346 1.1E-81 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 JO41_00390 eca02aba8b28d03ec18c76a428769fb9 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 291 2.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_00390 eca02aba8b28d03ec18c76a428769fb9 304 Gene3D G3DSA:1.10.3720.10 49 302 2.7E-59 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00390 eca02aba8b28d03ec18c76a428769fb9 304 SUPERFAMILY SSF161098 53 291 6.8E-50 T 14-10-2018 IPR035906 MetI-like superfamily JO41_02425 b3d1a6933e763d0ca885ef9d54fab75f 196 Pfam PF02325 YGGT family 12 80 1.6E-16 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 JO41_10795 b92ffbde45efadb8155745dc29c051db 175 Gene3D G3DSA:2.30.110.10 13 175 2.1E-20 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO41_10795 b92ffbde45efadb8155745dc29c051db 175 SUPERFAMILY SSF50475 15 127 1.4E-12 T 14-10-2018 JO41_03970 0d53dd3361b493f701d3422870bd7542 296 Pfam PF14238 Domain of unknown function (DUF4340) 79 199 2.9E-7 T 14-10-2018 IPR025641 Domain of unknown function DUF4340 JO41_08955 6709c1737d65d2aaf9d82202e7ad8218 325 SUPERFAMILY SSF55729 227 317 2.53E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_08955 6709c1737d65d2aaf9d82202e7ad8218 325 Gene3D G3DSA:3.40.630.30 212 318 6.9E-11 T 14-10-2018 JO41_08955 6709c1737d65d2aaf9d82202e7ad8218 325 Pfam PF03682 Uncharacterised protein family (UPF0158) 42 130 2.1E-7 T 14-10-2018 IPR005361 Uncharacterised protein family UPF0158 JO41_08955 6709c1737d65d2aaf9d82202e7ad8218 325 Pfam PF13673 Acetyltransferase (GNAT) domain 225 314 1.6E-6 T 14-10-2018 IPR000182 GNAT domain JO41_01865 91afa7269a1b68aee4efeb739688dbc4 337 Gene3D G3DSA:3.90.1640.10 8 211 8.4E-43 T 14-10-2018 JO41_01865 91afa7269a1b68aee4efeb739688dbc4 337 Gene3D G3DSA:3.10.310.30 212 332 5.5E-21 T 14-10-2018 JO41_01865 91afa7269a1b68aee4efeb739688dbc4 337 Pfam PF02272 DHHA1 domain 203 324 1.0E-7 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JO41_01865 91afa7269a1b68aee4efeb739688dbc4 337 Pfam PF01368 DHH family 23 164 2.5E-12 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JO41_01865 91afa7269a1b68aee4efeb739688dbc4 337 SUPERFAMILY SSF64182 20 321 2.22E-51 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JO41_04395 f0fe9fb9072221a851752cb68a6fe596 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 120 1.4E-40 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04395 f0fe9fb9072221a851752cb68a6fe596 120 Gene3D G3DSA:3.30.420.100 6 120 4.3E-39 T 14-10-2018 JO41_04395 f0fe9fb9072221a851752cb68a6fe596 120 SUPERFAMILY SSF53137 8 118 7.2E-45 T 14-10-2018 JO41_04395 f0fe9fb9072221a851752cb68a6fe596 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 120 7.5E-39 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_04395 f0fe9fb9072221a851752cb68a6fe596 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 7 120 25.744 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_12615 6dd4e87154816add7baa626a0c0cceef 331 SUPERFAMILY SSF52540 6 256 1.27E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_12615 6dd4e87154816add7baa626a0c0cceef 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 2.6E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO41_12615 6dd4e87154816add7baa626a0c0cceef 331 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_12615 6dd4e87154816add7baa626a0c0cceef 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 293 1.3E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JO41_12615 6dd4e87154816add7baa626a0c0cceef 331 Pfam PF00005 ABC transporter 27 184 5.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_12615 6dd4e87154816add7baa626a0c0cceef 331 SMART SM00382 35 234 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_12615 6dd4e87154816add7baa626a0c0cceef 331 Gene3D G3DSA:3.40.50.300 4 328 9.2E-99 T 14-10-2018 JO41_04080 07c466e9c2e8bc364682c1aed7c164aa 282 Gene3D G3DSA:3.40.50.80 101 205 3.5E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO41_04080 07c466e9c2e8bc364682c1aed7c164aa 282 SUPERFAMILY SSF63380 3 94 1.75E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JO41_04080 07c466e9c2e8bc364682c1aed7c164aa 282 PIRSF PIRSF006816 1 257 3.2E-65 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 JO41_04080 07c466e9c2e8bc364682c1aed7c164aa 282 SUPERFAMILY SSF52343 90 250 1.7E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JO41_04080 07c466e9c2e8bc364682c1aed7c164aa 282 Gene3D G3DSA:2.40.30.10 2 93 4.6E-20 T 14-10-2018 JO41_04080 07c466e9c2e8bc364682c1aed7c164aa 282 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 214 251 9.6E-14 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain JO41_04080 07c466e9c2e8bc364682c1aed7c164aa 282 Pfam PF00175 Oxidoreductase NAD-binding domain 106 198 1.2E-4 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JO41_04730 52e7a08ea7e0571cff88347dcba8a76d 573 SUPERFAMILY SSF51445 8 567 4.56E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_04730 52e7a08ea7e0571cff88347dcba8a76d 573 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 5 552 1.9E-105 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JO41_04730 52e7a08ea7e0571cff88347dcba8a76d 573 Pfam PF02446 4-alpha-glucanotransferase 14 548 7.0E-151 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JO41_05865 d82447f20fefb7b83860ea94d860d391 425 SMART SM01400 9 191 3.7E-9 T 14-10-2018 JO41_05865 d82447f20fefb7b83860ea94d860d391 425 Pfam PF00156 Phosphoribosyl transferase domain 211 333 3.9E-28 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JO41_05865 d82447f20fefb7b83860ea94d860d391 425 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 83 400 2.3E-100 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JO41_05865 d82447f20fefb7b83860ea94d860d391 425 SUPERFAMILY SSF53271 86 229 6.38E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO41_05865 d82447f20fefb7b83860ea94d860d391 425 SUPERFAMILY SSF53271 240 399 5.11E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO41_05865 d82447f20fefb7b83860ea94d860d391 425 Gene3D G3DSA:3.40.50.2020 219 376 3.1E-72 T 14-10-2018 JO41_05865 d82447f20fefb7b83860ea94d860d391 425 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 85 191 4.5E-23 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JO41_05865 d82447f20fefb7b83860ea94d860d391 425 Gene3D G3DSA:3.40.50.2020 86 388 3.1E-72 T 14-10-2018 JO41_10705 cae0b8ce0ddee1762a444eafecbaf67e 287 Pfam PF04085 rod shape-determining protein MreC 123 276 3.8E-35 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JO41_10705 cae0b8ce0ddee1762a444eafecbaf67e 287 Gene3D G3DSA:2.40.10.350 184 264 2.5E-35 T 14-10-2018 JO41_10705 cae0b8ce0ddee1762a444eafecbaf67e 287 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 7 278 1.7E-44 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JO41_10705 cae0b8ce0ddee1762a444eafecbaf67e 287 Gene3D G3DSA:2.40.10.340 121 275 2.5E-35 T 14-10-2018 JO41_10705 cae0b8ce0ddee1762a444eafecbaf67e 287 PIRSF PIRSF038471 2 286 4.0E-42 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JO41_10070 0e2ccb1a20115fae07c2eabce824e1d5 120 Gene3D G3DSA:3.10.530.10 45 113 4.1E-23 T 14-10-2018 IPR036593 CPE0013-like superfamily JO41_10070 0e2ccb1a20115fae07c2eabce824e1d5 120 Pfam PF07892 Protein of unknown function (DUF1667) 32 113 2.1E-32 T 14-10-2018 IPR012460 Protein of unknown function DUF1667 JO41_10070 0e2ccb1a20115fae07c2eabce824e1d5 120 SUPERFAMILY SSF160148 44 116 1.96E-25 T 14-10-2018 IPR036593 CPE0013-like superfamily JO41_07410 be19c87a71d0438025ceb739bd9aa004 257 Gene3D G3DSA:1.25.40.10 32 257 1.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_07410 be19c87a71d0438025ceb739bd9aa004 257 SUPERFAMILY SSF81901 179 253 1.44E-6 T 14-10-2018 JO41_09680 a83ce1d58367b628b5a8158fa45fd1ef 378 Pfam PF02687 FtsX-like permease family 282 361 2.2E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_09680 a83ce1d58367b628b5a8158fa45fd1ef 378 Pfam PF12704 MacB-like periplasmic core domain 23 194 3.6E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_09940 d81d116135e2c62a84e1a145d366f54a 188 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JO41_09940 d81d116135e2c62a84e1a145d366f54a 188 Gene3D G3DSA:3.90.79.10 5 185 1.9E-44 T 14-10-2018 JO41_09940 d81d116135e2c62a84e1a145d366f54a 188 Pfam PF00293 NUDIX domain 52 164 2.5E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JO41_09940 d81d116135e2c62a84e1a145d366f54a 188 SUPERFAMILY SSF55811 9 184 3.79E-39 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JO41_09940 d81d116135e2c62a84e1a145d366f54a 188 PRINTS PR00502 NUDIX hydrolase family signature 79 93 1.7E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO41_09940 d81d116135e2c62a84e1a145d366f54a 188 PRINTS PR00502 NUDIX hydrolase family signature 93 108 1.7E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JO41_04845 24a7b579ffb76ffa4a550c9119605faf 86 SUPERFAMILY SSF143011 1 83 2.35E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_04845 24a7b579ffb76ffa4a550c9119605faf 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 6.1E-31 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 JO41_04845 24a7b579ffb76ffa4a550c9119605faf 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 9.0E-37 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 JO41_04845 24a7b579ffb76ffa4a550c9119605faf 86 Gene3D G3DSA:3.30.2310.20 1 84 6.8E-38 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_10435 b6f74bd64b0a6a84e4799fa12d3e9d50 240 Pfam PF14080 Domain of unknown function (DUF4261) 165 239 3.6E-24 T 14-10-2018 IPR025357 Domain of unknown function DUF4261 JO41_11460 4e9a31beaf7df4ebde60246e7eb07c52 444 Pfam PF02687 FtsX-like permease family 334 434 6.3E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_11460 4e9a31beaf7df4ebde60246e7eb07c52 444 Pfam PF12704 MacB-like periplasmic core domain 18 240 4.9E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_04430 9759010abb21b50a7c7e7939b12fd396 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.344 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04430 9759010abb21b50a7c7e7939b12fd396 68 SUPERFAMILY SSF46561 1 62 6.41E-16 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04430 9759010abb21b50a7c7e7939b12fd396 68 Gene3D G3DSA:1.10.287.310 1 65 6.7E-17 T 14-10-2018 JO41_04430 9759010abb21b50a7c7e7939b12fd396 68 Pfam PF00831 Ribosomal L29 protein 7 60 1.2E-15 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04430 9759010abb21b50a7c7e7939b12fd396 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 60 8.3E-13 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_10945 df6d2c91c50d84f9c579177af765bc80 234 Pfam PF04773 FecR protein 70 150 8.5E-9 T 14-10-2018 IPR006860 FecR protein JO41_04235 db706d1b98637256d1f8358273a93fbe 93 Gene3D G3DSA:3.30.2310.20 1 93 6.2E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_04235 db706d1b98637256d1f8358273a93fbe 93 SUPERFAMILY SSF143011 1 93 3.53E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_04235 db706d1b98637256d1f8358273a93fbe 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 93 1.3E-19 T 14-10-2018 IPR007711 Toxin HigB-1 JO41_03700 0bf377df65a2ab3717778d68ab1f50a3 181 PIRSF PIRSF000709 1 180 6.6E-17 T 14-10-2018 JO41_03700 0bf377df65a2ab3717778d68ab1f50a3 181 SUPERFAMILY SSF53254 1 180 6.02E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO41_03700 0bf377df65a2ab3717778d68ab1f50a3 181 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JO41_03700 0bf377df65a2ab3717778d68ab1f50a3 181 SMART SM00855 2 154 7.9E-14 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_03700 0bf377df65a2ab3717778d68ab1f50a3 181 Gene3D G3DSA:3.40.50.1240 1 181 1.8E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JO41_03700 0bf377df65a2ab3717778d68ab1f50a3 181 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 179 9.3E-41 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JO41_05100 8b2d28f1a7953fa1832fb6223ac982d6 104 Gene3D G3DSA:3.30.2310.20 1 104 1.1E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_05100 8b2d28f1a7953fa1832fb6223ac982d6 104 SUPERFAMILY SSF143011 1 94 1.57E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_05100 8b2d28f1a7953fa1832fb6223ac982d6 104 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 100 2.7E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_12040 4d694d9bab6ba60b7a150851d06728bf 370 SUPERFAMILY SSF56796 29 368 5.1E-70 T 14-10-2018 JO41_12040 4d694d9bab6ba60b7a150851d06728bf 370 Gene3D G3DSA:3.40.50.1970 14 171 1.2E-25 T 14-10-2018 JO41_12040 4d694d9bab6ba60b7a150851d06728bf 370 Pfam PF00465 Iron-containing alcohol dehydrogenase 39 360 9.9E-65 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JO41_12040 4d694d9bab6ba60b7a150851d06728bf 370 Gene3D G3DSA:1.20.1090.10 173 370 3.4E-41 T 14-10-2018 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 SUPERFAMILY SSF116726 138 223 8.11E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 SUPERFAMILY SSF116726 390 462 1.7E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.5E-13 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.5E-13 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.5E-13 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.5E-13 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.5E-13 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 SUPERFAMILY SSF51735 1 149 9.31E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 SUPERFAMILY SSF51735 231 388 1.05E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Pfam PF02080 TrkA-C domain 157 223 4.5E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Pfam PF02080 TrkA-C domain 395 462 1.9E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Gene3D G3DSA:3.40.50.720 231 379 9.5E-27 T 14-10-2018 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Pfam PF02254 TrkA-N domain 233 363 1.4E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Pfam PF02254 TrkA-N domain 3 123 3.2E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Gene3D G3DSA:3.30.70.1450 381 466 6.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Gene3D G3DSA:3.30.70.1450 140 224 1.4E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_07955 85aeaffc8bd376ff8ed99cea3db2c010 466 Gene3D G3DSA:3.40.50.720 1 138 9.9E-37 T 14-10-2018 JO41_02715 51e2f6cb1111e5ecd6d3e8de5b20fe07 257 SUPERFAMILY SSF56281 18 243 1.24E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_02715 51e2f6cb1111e5ecd6d3e8de5b20fe07 257 Gene3D G3DSA:3.60.15.10 10 245 1.4E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JO41_02715 51e2f6cb1111e5ecd6d3e8de5b20fe07 257 SMART SM00849 35 227 2.7E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_02715 51e2f6cb1111e5ecd6d3e8de5b20fe07 257 Pfam PF00753 Metallo-beta-lactamase superfamily 33 227 5.1E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase JO41_12625 5174fa56d8e7959ddbbdd16c68ecf632 388 Gene3D G3DSA:3.90.1150.10 32 378 2.0E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_12625 5174fa56d8e7959ddbbdd16c68ecf632 388 Gene3D G3DSA:3.40.640.10 63 282 2.0E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_12625 5174fa56d8e7959ddbbdd16c68ecf632 388 SUPERFAMILY SSF53383 8 384 2.93E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_12625 5174fa56d8e7959ddbbdd16c68ecf632 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 JO41_12625 5174fa56d8e7959ddbbdd16c68ecf632 388 Pfam PF00155 Aminotransferase class I and II 32 379 2.1E-65 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO41_09100 ee4b66654e38f5de3ca4b563dd4dac1a 148 PIRSF PIRSF039090 2 137 3.1E-32 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JO41_09100 ee4b66654e38f5de3ca4b563dd4dac1a 148 SUPERFAMILY SSF101116 6 127 4.97E-34 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 JO41_09100 ee4b66654e38f5de3ca4b563dd4dac1a 148 TIGRFAM TIGR00208 fliS: flagellar protein FliS 5 129 7.7E-28 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JO41_09100 ee4b66654e38f5de3ca4b563dd4dac1a 148 Pfam PF02561 Flagellar protein FliS 9 126 4.5E-39 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JO41_09100 ee4b66654e38f5de3ca4b563dd4dac1a 148 Gene3D G3DSA:1.20.120.340 1 131 4.0E-43 T 14-10-2018 JO41_07575 e2838d060027e74f2b1388ce72d2ef49 424 Gene3D G3DSA:2.30.40.10 16 417 3.8E-136 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_07575 e2838d060027e74f2b1388ce72d2ef49 424 SUPERFAMILY SSF51338 346 420 2.37E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_07575 e2838d060027e74f2b1388ce72d2ef49 424 Gene3D G3DSA:3.20.20.140 64 368 3.8E-136 T 14-10-2018 JO41_07575 e2838d060027e74f2b1388ce72d2ef49 424 SUPERFAMILY SSF51338 7 76 2.54E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JO41_07575 e2838d060027e74f2b1388ce72d2ef49 424 SUPERFAMILY SSF51556 63 365 1.36E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_07575 e2838d060027e74f2b1388ce72d2ef49 424 Pfam PF01979 Amidohydrolase family 61 398 1.3E-54 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JO41_12310 172f670cf15f186ee6f255ab5efea654 244 SUPERFAMILY SSF48371 4 179 3.96E-5 T 14-10-2018 IPR016024 Armadillo-type fold JO41_00050 c23d95805a2deb61543ec288d525cdc1 416 Pfam PF13679 Methyltransferase domain 157 298 4.8E-34 T 14-10-2018 IPR025714 Methyltransferase domain JO41_00050 c23d95805a2deb61543ec288d525cdc1 416 Gene3D G3DSA:3.40.50.150 150 336 4.1E-9 T 14-10-2018 JO41_00050 c23d95805a2deb61543ec288d525cdc1 416 SUPERFAMILY SSF53335 182 310 1.14E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_12110 11118518b537ec02c7e94462dc05a6dc 313 Gene3D G3DSA:3.40.50.1980 14 171 3.5E-36 T 14-10-2018 JO41_12110 11118518b537ec02c7e94462dc05a6dc 313 Pfam PF01497 Periplasmic binding protein 49 288 1.4E-17 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JO41_12110 11118518b537ec02c7e94462dc05a6dc 313 SUPERFAMILY SSF53807 38 310 3.92E-37 T 14-10-2018 JO41_12110 11118518b537ec02c7e94462dc05a6dc 313 Gene3D G3DSA:3.40.50.1980 172 312 1.0E-13 T 14-10-2018 JO41_12375 4f275a9787fc91c92bc9e1838726fb01 283 PIRSF PIRSF033642 1 283 2.3E-113 T 14-10-2018 IPR024198 Uncharacterised conserved protein, UCP033642 JO41_12375 4f275a9787fc91c92bc9e1838726fb01 283 Pfam PF10020 Uncharacterized protein conserved in bacteria (DUF2262) 143 280 1.8E-44 T 14-10-2018 IPR019260 Domain of unknown function DUF2262 JO41_07120 1df51d6235d598cd7c970150303b9406 119 Pfam PF13411 MerR HTH family regulatory protein 4 68 2.8E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JO41_07120 1df51d6235d598cd7c970150303b9406 119 SUPERFAMILY SSF46955 4 94 7.78E-14 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JO41_07120 1df51d6235d598cd7c970150303b9406 119 Gene3D G3DSA:1.10.1660.10 2 74 9.4E-20 T 14-10-2018 JO41_07120 1df51d6235d598cd7c970150303b9406 119 SMART SM00422 4 74 1.5E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JO41_05520 002cd523cce3227b9d9023c217921f12 660 Gene3D G3DSA:3.40.710.10 180 565 1.9E-71 T 14-10-2018 JO41_05520 002cd523cce3227b9d9023c217921f12 660 Pfam PF00144 Beta-lactamase 197 559 8.1E-52 T 14-10-2018 IPR001466 Beta-lactamase-related JO41_05520 002cd523cce3227b9d9023c217921f12 660 SUPERFAMILY SSF56601 198 557 3.26E-63 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO41_12655 bf2c42c95df9f888e9b3a6100765a4aa 326 Gene3D G3DSA:2.170.120.30 37 136 1.3E-13 T 14-10-2018 JO41_12655 bf2c42c95df9f888e9b3a6100765a4aa 326 Gene3D G3DSA:2.170.120.30 226 320 1.4E-8 T 14-10-2018 JO41_12655 bf2c42c95df9f888e9b3a6100765a4aa 326 Pfam PF07949 YbbR-like protein 136 217 8.1E-10 T 14-10-2018 IPR012505 YbbR-like JO41_12655 bf2c42c95df9f888e9b3a6100765a4aa 326 Gene3D G3DSA:2.170.120.40 137 225 6.0E-11 T 14-10-2018 JO41_05275 48cd389805e9d03f8e67d902ec1021c6 179 SUPERFAMILY SSF50475 24 179 3.7E-17 T 14-10-2018 JO41_05275 48cd389805e9d03f8e67d902ec1021c6 179 Gene3D G3DSA:2.30.110.10 6 179 3.6E-23 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO41_05275 48cd389805e9d03f8e67d902ec1021c6 179 Pfam PF01613 Flavin reductase like domain 27 178 2.2E-8 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JO41_08440 f7e341fc9cb66aedd731457e4515453f 273 SUPERFAMILY SSF51445 53 261 3.1E-28 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_08440 f7e341fc9cb66aedd731457e4515453f 273 Gene3D G3DSA:3.20.20.70 23 272 3.5E-25 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_08440 f7e341fc9cb66aedd731457e4515453f 273 Pfam PF03537 Glycoside-hydrolase family GH114 42 263 1.5E-21 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PRINTS PR01806 Virulence factor MviN signature 37 56 1.5E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PRINTS PR01806 Virulence factor MviN signature 56 72 1.5E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PRINTS PR01806 Virulence factor MviN signature 268 294 1.5E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PRINTS PR01806 Virulence factor MviN signature 418 435 1.5E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PRINTS PR01806 Virulence factor MviN signature 163 184 1.5E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PRINTS PR01806 Virulence factor MviN signature 366 385 1.5E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PRINTS PR01806 Virulence factor MviN signature 139 163 1.5E-51 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 7 479 16.925 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 518 1.2E-117 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 PIRSF PIRSF002869 2 527 7.9E-136 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_03635 d89e4ddd849636ff885a107ea3458db6 528 Pfam PF03023 MviN-like protein 33 474 1.5E-106 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JO41_10700 267cea61225d602fdeedb0687b2269ad 344 Pfam PF06723 MreB/Mbl protein 9 331 1.1E-141 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 Gene3D G3DSA:3.30.420.40 151 314 1.1E-121 T 14-10-2018 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 SUPERFAMILY SSF53067 147 328 5.64E-49 T 14-10-2018 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 Gene3D G3DSA:3.90.640.10 183 256 1.1E-121 T 14-10-2018 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 332 1.0E-157 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 SUPERFAMILY SSF53067 7 144 1.51E-35 T 14-10-2018 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 Gene3D G3DSA:3.30.420.40 11 323 1.1E-121 T 14-10-2018 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 5.5E-53 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 5.5E-53 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 5.5E-53 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 5.5E-53 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO41_10700 267cea61225d602fdeedb0687b2269ad 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 5.5E-53 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JO41_10105 0eba107ec9062c64e5de5cb20f16b6d9 568 Pfam PF17239 Family of unknown function (DUF5312) 6 558 3.8E-220 T 14-10-2018 IPR035196 Protein of unknown function DUF5312 JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 Pfam PF00005 ABC transporter 351 499 1.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 SUPERFAMILY SSF90123 5 316 1.09E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 Pfam PF00664 ABC transporter transmembrane region 20 290 1.3E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 SMART SM00382 360 546 3.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 Gene3D G3DSA:3.40.50.300 323 574 8.9E-79 T 14-10-2018 JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 SUPERFAMILY SSF52540 331 568 8.04E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11715 d2658b20642548bcc71b848c5bd3ea74 578 Gene3D G3DSA:1.20.1560.10 1 321 3.9E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JO41_05785 e1fd7df87c114957db02fecd034f4542 336 SUPERFAMILY SSF117892 41 182 1.05E-11 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO41_05785 e1fd7df87c114957db02fecd034f4542 336 Gene3D G3DSA:3.30.479.30 39 179 1.4E-6 T 14-10-2018 JO41_05785 e1fd7df87c114957db02fecd034f4542 336 Pfam PF01145 SPFH domain / Band 7 family 10 192 1.1E-13 T 14-10-2018 IPR001107 Band 7 domain JO41_00685 af137af251ee066dd5811dfeaaff7a68 434 Pfam PF00691 OmpA family 330 425 1.1E-20 T 14-10-2018 IPR006665 OmpA-like domain JO41_00685 af137af251ee066dd5811dfeaaff7a68 434 PRINTS PR01021 OMPA domain signature 360 375 8.8E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JO41_00685 af137af251ee066dd5811dfeaaff7a68 434 PRINTS PR01021 OMPA domain signature 375 391 8.8E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JO41_00685 af137af251ee066dd5811dfeaaff7a68 434 PRINTS PR01021 OMPA domain signature 330 352 8.8E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JO41_00685 af137af251ee066dd5811dfeaaff7a68 434 Gene3D G3DSA:3.30.1330.60 292 434 2.8E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_00685 af137af251ee066dd5811dfeaaff7a68 434 SUPERFAMILY SSF103088 323 431 5.49E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_10285 00e8a801dd58ce1b428a0b5e73c1695a 285 Gene3D G3DSA:3.40.1280.10 121 284 5.3E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JO41_10285 00e8a801dd58ce1b428a0b5e73c1695a 285 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 60 282 1.9E-59 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 JO41_10285 00e8a801dd58ce1b428a0b5e73c1695a 285 SUPERFAMILY SSF75217 130 283 1.11E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JO41_10285 00e8a801dd58ce1b428a0b5e73c1695a 285 Pfam PF00588 SpoU rRNA Methylase family 138 277 9.3E-38 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JO41_09520 17b7af781398c6e59763187e5ae68842 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 418 9.2E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_09520 17b7af781398c6e59763187e5ae68842 456 PIRSF PIRSF006603 3 456 3.6E-71 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_09520 17b7af781398c6e59763187e5ae68842 456 Pfam PF01554 MatE 271 412 4.6E-15 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_09520 17b7af781398c6e59763187e5ae68842 456 Pfam PF01554 MatE 26 186 6.4E-33 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_08865 00da45baff1dff152a7c78c7eaaf20bf 91 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 30 81 3.5E-14 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JO41_06390 404cae5b4610f524f18c048a20a31c72 382 Gene3D G3DSA:3.40.50.2000 195 361 1.9E-29 T 14-10-2018 JO41_06390 404cae5b4610f524f18c048a20a31c72 382 SUPERFAMILY SSF53756 91 376 1.82E-22 T 14-10-2018 JO41_06390 404cae5b4610f524f18c048a20a31c72 382 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 212 348 9.8E-15 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 JO41_06390 404cae5b4610f524f18c048a20a31c72 382 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 16 180 9.4E-10 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 JO41_02625 75fcf6602f1ef4845d83c2bdf6c89f24 182 Pfam PF13302 Acetyltransferase (GNAT) domain 12 146 7.0E-25 T 14-10-2018 IPR000182 GNAT domain JO41_02625 75fcf6602f1ef4845d83c2bdf6c89f24 182 SUPERFAMILY SSF55729 3 170 1.41E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_02625 75fcf6602f1ef4845d83c2bdf6c89f24 182 Gene3D G3DSA:3.40.630.30 4 178 1.3E-43 T 14-10-2018 JO41_02925 e0dc5d2fb6bee45f9334f2bfda41328e 381 SUPERFAMILY SSF53383 1 377 9.71E-85 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_02925 e0dc5d2fb6bee45f9334f2bfda41328e 381 Gene3D G3DSA:3.40.640.10 16 268 7.8E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_02925 e0dc5d2fb6bee45f9334f2bfda41328e 381 Pfam PF00266 Aminotransferase class-V 2 369 2.0E-72 T 14-10-2018 IPR000192 Aminotransferase class V domain JO41_02925 e0dc5d2fb6bee45f9334f2bfda41328e 381 Gene3D G3DSA:3.90.1150.10 2 371 7.8E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_12005 0fe39362624d7c92a984f40dc9441a41 244 Gene3D G3DSA:3.10.129.10 94 244 4.4E-38 T 14-10-2018 JO41_12005 0fe39362624d7c92a984f40dc9441a41 244 Pfam PF07977 FabA-like domain 113 237 1.4E-17 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO41_12005 0fe39362624d7c92a984f40dc9441a41 244 SUPERFAMILY SSF54637 105 243 3.58E-31 T 14-10-2018 IPR029069 HotDog domain superfamily JO41_12605 22abdf40d8019293ccda078a30b8d72c 322 SUPERFAMILY SSF161098 92 303 1.57E-16 T 14-10-2018 IPR035906 MetI-like superfamily JO41_12605 22abdf40d8019293ccda078a30b8d72c 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 320 3.4E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_12605 22abdf40d8019293ccda078a30b8d72c 322 Gene3D G3DSA:1.10.3720.10 92 314 5.5E-15 T 14-10-2018 IPR035906 MetI-like superfamily JO41_03850 3b0e9db297cd76e0175d90974f81c355 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 4.6E-33 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO41_03850 3b0e9db297cd76e0175d90974f81c355 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 58.526 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO41_03850 3b0e9db297cd76e0175d90974f81c355 317 SUPERFAMILY SSF53901 9 317 6.82E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_03850 3b0e9db297cd76e0175d90974f81c355 317 Gene3D G3DSA:3.40.47.10 1 317 9.9E-114 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JO41_03850 3b0e9db297cd76e0175d90974f81c355 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 317 2.6E-96 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO41_03850 3b0e9db297cd76e0175d90974f81c355 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 191 4.6E-29 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JO41_06750 b5c5d7b15109e35395457319f44c6a21 271 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 193 8.1E-66 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 JO41_06750 b5c5d7b15109e35395457319f44c6a21 271 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 196 25.171 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 JO41_06750 b5c5d7b15109e35395457319f44c6a21 271 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 186 5.1E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JO41_06360 e57e6782eb6c830b54719d38c0cf73d4 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 301 1.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_06360 e57e6782eb6c830b54719d38c0cf73d4 311 Gene3D G3DSA:1.10.3720.10 57 308 2.7E-58 T 14-10-2018 IPR035906 MetI-like superfamily JO41_06360 e57e6782eb6c830b54719d38c0cf73d4 311 SUPERFAMILY SSF161098 16 305 4.84E-48 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00750 e9b443047ddf1c090b63b7b64fccdd34 96 Pfam PF00872 Transposase, Mutator family 2 72 2.9E-16 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JO41_00960 38a2d4f0697669d486b99b93104203cb 155 Pfam PF08445 FR47-like protein 47 104 1.9E-10 T 14-10-2018 IPR013653 FR47-like GO:0016747 JO41_00960 38a2d4f0697669d486b99b93104203cb 155 Gene3D G3DSA:3.40.630.30 24 112 4.6E-17 T 14-10-2018 JO41_00960 38a2d4f0697669d486b99b93104203cb 155 SUPERFAMILY SSF55729 39 115 3.72E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_03935 7368549f27ab2af247e9eac20e3ce123 310 SUPERFAMILY SSF48179 177 305 4.42E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JO41_03935 7368549f27ab2af247e9eac20e3ce123 310 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 306 1.6E-75 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 JO41_03935 7368549f27ab2af247e9eac20e3ce123 310 Gene3D G3DSA:1.10.1040.10 177 309 1.4E-40 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JO41_03935 7368549f27ab2af247e9eac20e3ce123 310 Gene3D G3DSA:3.40.50.720 1 176 3.8E-50 T 14-10-2018 JO41_03935 7368549f27ab2af247e9eac20e3ce123 310 SUPERFAMILY SSF51735 1 137 1.38E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_03935 7368549f27ab2af247e9eac20e3ce123 310 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 305 6.9E-28 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain JO41_03935 7368549f27ab2af247e9eac20e3ce123 310 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 1.2E-36 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain JO41_11965 27f65ddfb0689d3a926919f4825035e2 949 SUPERFAMILY SSF82171 269 518 8.24E-7 T 14-10-2018 JO41_01105 ef9e9a0df09738ae0b65e6fc15a01ddc 234 SUPERFAMILY SSF56037 52 213 2.3E-32 T 14-10-2018 JO41_01105 ef9e9a0df09738ae0b65e6fc15a01ddc 234 Gene3D G3DSA:3.50.40.10 72 228 7.3E-9 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 JO41_01105 ef9e9a0df09738ae0b65e6fc15a01ddc 234 SMART SM00873 64 213 3.7E-15 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO41_01105 ef9e9a0df09738ae0b65e6fc15a01ddc 234 Pfam PF03483 B3/4 domain 70 202 4.0E-25 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO41_04090 733785637dd743213ce385aaa87b4542 459 Hamap MF_00544 Tryptophanase [tnaA]. 2 458 96.321 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 JO41_04090 733785637dd743213ce385aaa87b4542 459 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 248 266 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 JO41_04090 733785637dd743213ce385aaa87b4542 459 Pfam PF01212 Beta-eliminating lyase 47 424 3.7E-94 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JO41_04090 733785637dd743213ce385aaa87b4542 459 PIRSF PIRSF001386 1 459 1.4E-224 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 JO41_04090 733785637dd743213ce385aaa87b4542 459 SUPERFAMILY SSF53383 3 458 5.51E-141 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_04090 733785637dd743213ce385aaa87b4542 459 Gene3D G3DSA:3.40.640.10 59 319 1.8E-211 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_04090 733785637dd743213ce385aaa87b4542 459 Gene3D G3DSA:3.90.1150.10 7 453 1.8E-211 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_08780 772a9b13fb20f724261337af8b7f9283 167 Pfam PF00691 OmpA family 65 161 6.1E-18 T 14-10-2018 IPR006665 OmpA-like domain JO41_08780 772a9b13fb20f724261337af8b7f9283 167 Gene3D G3DSA:3.30.1330.60 27 167 3.9E-22 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_08780 772a9b13fb20f724261337af8b7f9283 167 SUPERFAMILY SSF103088 62 167 3.27E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily JO41_10585 0a7a3aac89dad123ecca97904d4e6afa 385 Gene3D G3DSA:3.40.50.12170 5 384 1.8E-111 T 14-10-2018 JO41_10585 0a7a3aac89dad123ecca97904d4e6afa 385 PIRSF PIRSF016719 1 385 1.7E-119 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JO41_10585 0a7a3aac89dad123ecca97904d4e6afa 385 Gene3D G3DSA:3.90.1150.140 215 369 1.8E-111 T 14-10-2018 JO41_10585 0a7a3aac89dad123ecca97904d4e6afa 385 Pfam PF07075 Protein of unknown function (DUF1343) 22 384 8.9E-110 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JO41_06500 520df141d39b7d2cc55c28f11c636bf7 166 SUPERFAMILY SSF160443 84 166 7.32E-16 T 14-10-2018 IPR036063 Smr domain superfamily JO41_06500 520df141d39b7d2cc55c28f11c636bf7 166 Pfam PF01713 Smr domain 86 166 9.0E-19 T 14-10-2018 IPR002625 Smr domain JO41_06500 520df141d39b7d2cc55c28f11c636bf7 166 SMART SM00463 83 166 3.7E-17 T 14-10-2018 IPR002625 Smr domain JO41_06500 520df141d39b7d2cc55c28f11c636bf7 166 Gene3D G3DSA:3.30.1370.110 57 166 6.6E-22 T 14-10-2018 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 251 268 4.0E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 231 249 4.0E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 325 346 4.0E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 32 54 4.0E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 295 310 4.0E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 Gene3D G3DSA:3.40.1690.10 240 381 2.2E-53 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 29 376 4.4E-124 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 30 369 1.5E-116 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO41_09495 de91107bbc0b37aa660deab3881bb8ad 383 SUPERFAMILY SSF160544 267 374 2.75E-36 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JO41_09815 c3f77ad5f2564faf984b63487cd201de 86 SUPERFAMILY SSF160537 1 83 3.01E-32 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 JO41_09815 c3f77ad5f2564faf984b63487cd201de 86 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 86 24.098 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 JO41_09815 c3f77ad5f2564faf984b63487cd201de 86 Gene3D G3DSA:3.30.1120.40 1 86 5.9E-36 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 JO41_09815 c3f77ad5f2564faf984b63487cd201de 86 Pfam PF04026 SpoVG 1 81 1.0E-35 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 JO41_05565 97f10b31ce4493740c94902cc3b95c40 1151 Gene3D G3DSA:3.40.50.300 395 635 4.5E-22 T 14-10-2018 JO41_05565 97f10b31ce4493740c94902cc3b95c40 1151 Gene3D G3DSA:3.40.50.300 664 892 1.9E-22 T 14-10-2018 JO41_05565 97f10b31ce4493740c94902cc3b95c40 1151 Pfam PF13087 AAA domain 869 1113 2.1E-36 T 14-10-2018 JO41_05565 97f10b31ce4493740c94902cc3b95c40 1151 SMART SM00382 476 872 0.0097 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_05565 97f10b31ce4493740c94902cc3b95c40 1151 Pfam PF13086 AAA domain 463 845 2.9E-29 T 14-10-2018 JO41_05565 97f10b31ce4493740c94902cc3b95c40 1151 SUPERFAMILY SSF52540 460 1118 5.04E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05565 97f10b31ce4493740c94902cc3b95c40 1151 Gene3D G3DSA:3.40.50.300 893 1143 5.9E-39 T 14-10-2018 JO41_07790 86b7e9364444a2ebf2be229d89a1c6bf 228 Pfam PF00107 Zinc-binding dehydrogenase 66 150 1.7E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JO41_07790 86b7e9364444a2ebf2be229d89a1c6bf 228 SUPERFAMILY SSF51735 27 197 2.63E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_07790 86b7e9364444a2ebf2be229d89a1c6bf 228 SMART SM00829 2 226 0.0066 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JO41_07790 86b7e9364444a2ebf2be229d89a1c6bf 228 Gene3D G3DSA:3.90.180.10 1 228 5.8E-45 T 14-10-2018 JO41_00910 64a41fc68e9245fbd9093372125bae4c 578 Pfam PF02386 Cation transport protein 132 567 3.9E-81 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 JO41_00910 64a41fc68e9245fbd9093372125bae4c 578 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 153 549 1.2E-106 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JO41_05770 7188dd5ada909b8c1c2a1c6c1cc6b400 474 Gene3D G3DSA:3.30.950.30 2 133 3.8E-22 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily JO41_05770 7188dd5ada909b8c1c2a1c6c1cc6b400 474 Gene3D G3DSA:3.30.565.60 228 387 2.2E-13 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily JO41_05770 7188dd5ada909b8c1c2a1c6c1cc6b400 474 Pfam PF04326 Putative DNA-binding domain 14 111 3.1E-14 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 JO41_10930 fd5a98a75d1d9779c2e53c5c13bf755c 325 SUPERFAMILY SSF53850 81 323 5.44E-48 T 14-10-2018 JO41_10930 fd5a98a75d1d9779c2e53c5c13bf755c 325 Pfam PF12849 PBP superfamily domain 83 310 1.1E-21 T 14-10-2018 IPR024370 PBP domain JO41_10930 fd5a98a75d1d9779c2e53c5c13bf755c 325 Gene3D G3DSA:3.40.190.10 245 325 1.6E-18 T 14-10-2018 JO41_10930 fd5a98a75d1d9779c2e53c5c13bf755c 325 Gene3D G3DSA:3.40.190.10 164 235 2.2E-17 T 14-10-2018 JO41_09720 960e3efc145a6e47f69ea11e8fbc8209 252 Gene3D G3DSA:3.40.50.150 50 250 5.7E-22 T 14-10-2018 JO41_09720 960e3efc145a6e47f69ea11e8fbc8209 252 SUPERFAMILY SSF53335 54 242 2.73E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_09720 960e3efc145a6e47f69ea11e8fbc8209 252 Pfam PF08241 Methyltransferase domain 67 162 7.6E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.5E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.5E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.5E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.5E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 46 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 Gene3D G3DSA:1.20.5.1150 16 65 2.3E-12 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 2.7E-20 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.147 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_05595 b49a1b1e15cb35d8b9e0a29273bdd726 69 Pfam PF01165 Ribosomal protein S21 4 56 3.5E-19 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_03475 a68fd5e1cdb84bbf46823be7c8d164bb 221 SUPERFAMILY SSF55797 102 218 9.68E-12 T 14-10-2018 IPR035940 CAP superfamily JO41_03475 a68fd5e1cdb84bbf46823be7c8d164bb 221 Pfam PF00188 Cysteine-rich secretory protein family 100 214 9.0E-9 T 14-10-2018 IPR014044 CAP domain JO41_09885 4349a98d061ac9273e3147bb156fac45 321 SMART SM00882 4 242 1.7E-22 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JO41_09885 4349a98d061ac9273e3147bb156fac45 321 Gene3D G3DSA:3.40.1080.10 4 304 2.8E-123 T 14-10-2018 JO41_09885 4349a98d061ac9273e3147bb156fac45 321 SUPERFAMILY SSF100950 2 312 1.74E-77 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_09885 4349a98d061ac9273e3147bb156fac45 321 Gene3D G3DSA:3.30.30.40 118 170 2.8E-123 T 14-10-2018 JO41_09885 4349a98d061ac9273e3147bb156fac45 321 Pfam PF01144 Coenzyme A transferase 4 241 2.1E-40 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JO41_08710 88b98e64a3dd05177dcf583273787236 482 Gene3D G3DSA:3.30.1610.20 1 231 5.1E-94 T 14-10-2018 IPR038546 Hen1, N-terminal domain superfamily JO41_08710 88b98e64a3dd05177dcf583273787236 482 SUPERFAMILY SSF53335 284 449 6.1E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_08710 88b98e64a3dd05177dcf583273787236 482 Pfam PF13489 Methyltransferase domain 281 448 1.3E-11 T 14-10-2018 JO41_08710 88b98e64a3dd05177dcf583273787236 482 Pfam PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 1 243 3.6E-101 T 14-10-2018 IPR024740 Hen1, N-terminal JO41_08710 88b98e64a3dd05177dcf583273787236 482 Gene3D G3DSA:3.40.50.150 273 481 2.0E-64 T 14-10-2018 JO41_08710 88b98e64a3dd05177dcf583273787236 482 TIGRFAM TIGR04074 bacter_Hen1: 3' terminal RNA ribose 2'-O-methyltransferase Hen1 2 479 7.5E-202 T 14-10-2018 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial JO41_03165 2afc64a60e9df23f48967900bac265ae 128 Gene3D G3DSA:3.10.450.700 1 78 5.3E-25 T 14-10-2018 JO41_03165 2afc64a60e9df23f48967900bac265ae 128 SMART SM00712 6 73 5.5E-26 T 14-10-2018 IPR006628 Purine-rich element binding protein family JO41_03165 2afc64a60e9df23f48967900bac265ae 128 Pfam PF11680 Protein of unknown function (DUF3276) 6 111 3.8E-17 T 14-10-2018 IPR021694 Protein of unknown function DUF3276 JO41_01605 eb54825bc870f298e5eeb694b43fbfc9 312 Pfam PF09323 Domain of unknown function (DUF1980) 16 220 4.0E-12 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 JO41_01605 eb54825bc870f298e5eeb694b43fbfc9 312 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 34 309 4.9E-42 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 JO41_12495 ce9c5efe7f84fa761a8339419b9ae4f1 200 Gene3D G3DSA:3.40.50.150 19 198 3.5E-47 T 14-10-2018 JO41_12495 ce9c5efe7f84fa761a8339419b9ae4f1 200 PIRSF PIRSF005461 2 200 1.5E-62 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 JO41_12495 ce9c5efe7f84fa761a8339419b9ae4f1 200 Pfam PF01728 FtsJ-like methyltransferase 20 196 2.3E-45 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JO41_12495 ce9c5efe7f84fa761a8339419b9ae4f1 200 SUPERFAMILY SSF53335 19 197 1.4E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_12495 ce9c5efe7f84fa761a8339419b9ae4f1 200 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 4 197 24.801 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 JO41_03615 2fd5d6425307f2a68aaa65faa00f8e70 263 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 3 263 2.2E-44 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_03615 2fd5d6425307f2a68aaa65faa00f8e70 263 Pfam PF12784 PD-(D/E)XK nuclease family transposase 5 160 5.1E-15 T 14-10-2018 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 SUPERFAMILY SSF58104 459 725 2.88E-39 T 14-10-2018 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 532 691 8.1E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 514 5.7E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 639 668 5.7E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 591 620 5.7E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 589 5.7E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 SMART SM00283 464 725 1.4E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 Gene3D G3DSA:1.10.287.950 412 737 8.8E-46 T 14-10-2018 JO41_11270 62ed3ccfbd2dfa1e36c632d64c1df3ab 762 Pfam PF07695 7TM diverse intracellular signalling 196 392 4.0E-23 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_03890 cc9fedfc294601b77ebc84314fac59e5 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 27.662 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 JO41_03890 cc9fedfc294601b77ebc84314fac59e5 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 144 1.5E-34 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 JO41_05230 45b737081d635c91151ab5d9fac83543 551 Gene3D G3DSA:3.40.50.300 1 279 6.5E-64 T 14-10-2018 JO41_05230 45b737081d635c91151ab5d9fac83543 551 Gene3D G3DSA:3.40.50.300 283 546 3.9E-38 T 14-10-2018 JO41_05230 45b737081d635c91151ab5d9fac83543 551 SUPERFAMILY SSF52540 7 238 2.75E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05230 45b737081d635c91151ab5d9fac83543 551 Pfam PF00005 ABC transporter 341 472 2.0E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_05230 45b737081d635c91151ab5d9fac83543 551 SUPERFAMILY SSF52540 297 520 3.14E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05230 45b737081d635c91151ab5d9fac83543 551 Pfam PF00005 ABC transporter 18 184 1.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_05230 45b737081d635c91151ab5d9fac83543 551 SMART SM00382 26 231 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_05230 45b737081d635c91151ab5d9fac83543 551 SMART SM00382 350 517 7.4 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_05230 45b737081d635c91151ab5d9fac83543 551 Pfam PF12848 ABC transporter 224 308 9.6E-18 T 14-10-2018 IPR032781 ABC-transporter extension domain JO41_02565 9b635333ef872a97f7137f901d01e381 345 Gene3D G3DSA:3.30.930.10 1 339 1.1E-68 T 14-10-2018 JO41_02565 9b635333ef872a97f7137f901d01e381 345 Pfam PF00152 tRNA synthetases class II (D, K and N) 5 332 1.0E-30 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JO41_02565 9b635333ef872a97f7137f901d01e381 345 SUPERFAMILY SSF55681 5 333 3.98E-51 T 14-10-2018 JO41_00800 f737d612190bbe732a42b551fc3235b6 288 Gene3D G3DSA:1.10.3720.10 2 279 8.1E-62 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00800 f737d612190bbe732a42b551fc3235b6 288 SUPERFAMILY SSF161098 10 288 3.43E-51 T 14-10-2018 IPR035906 MetI-like superfamily JO41_01335 da42baee0e30d2afd9e66770d5afbb36 151 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 151 6.1E-46 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 JO41_01335 da42baee0e30d2afd9e66770d5afbb36 151 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 104 148 1.1E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_01335 da42baee0e30d2afd9e66770d5afbb36 151 Pfam PF00460 Flagella basal body rod protein 7 34 1.5E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO41_01335 da42baee0e30d2afd9e66770d5afbb36 151 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 Pfam PF00162 Phosphoglycerate kinase 5 408 1.3E-154 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 SUPERFAMILY SSF53748 3 417 2.71E-154 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 Gene3D G3DSA:3.40.50.1260 204 418 6.4E-86 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 335 360 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 213 232 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 190 212 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 371 382 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 394 411 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 159 181 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PRINTS PR00477 Phosphoglycerate kinase family signature 127 142 6.0E-92 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 PIRSF PIRSF000724 1 418 2.1E-149 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 Gene3D G3DSA:3.40.50.1260 2 193 1.1E-69 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_10075 206890caa8d4918c49fefe771bf79e6b 418 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 418 40.562 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JO41_01610 b8681c93e9cef02877ad0f28a769127a 347 Gene3D G3DSA:3.10.520.20 17 339 2.4E-110 T 14-10-2018 JO41_01610 b8681c93e9cef02877ad0f28a769127a 347 SUPERFAMILY SSF143631 26 328 3.14E-91 T 14-10-2018 IPR003374 ApbE-like superfamily JO41_01610 b8681c93e9cef02877ad0f28a769127a 347 Pfam PF02424 ApbE family 32 311 8.2E-83 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 JO41_01610 b8681c93e9cef02877ad0f28a769127a 347 PIRSF PIRSF006268 1 333 1.6E-102 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 JO41_00845 0e4d5676cc00da240883ebf6d4d4b484 522 Gene3D G3DSA:2.30.310.10 2 151 1.3E-21 T 14-10-2018 JO41_00845 0e4d5676cc00da240883ebf6d4d4b484 522 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 10 149 1.6E-20 T 14-10-2018 JO41_00845 0e4d5676cc00da240883ebf6d4d4b484 522 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 206 373 1.3E-26 T 14-10-2018 JO41_00845 0e4d5676cc00da240883ebf6d4d4b484 522 Pfam PF05670 Domain of unknown function (DUF814) 397 483 3.5E-19 T 14-10-2018 IPR008532 Domain of unknown function DUF814 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 Hamap MF_00242 Arginine deiminase [arcA]. 1 408 42.113 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 Gene3D G3DSA:3.75.10.10 6 404 9.9E-155 T 14-10-2018 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 PIRSF PIRSF006356 1 408 3.6E-165 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 Pfam PF02274 Amidinotransferase 18 406 1.5E-95 T 14-10-2018 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 Gene3D G3DSA:1.10.3930.10 68 153 9.9E-155 T 14-10-2018 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 SUPERFAMILY SSF55909 2 407 1.06E-128 T 14-10-2018 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 TIGRFAM TIGR01078 arcA: arginine deiminase 5 407 3.9E-155 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 4.7E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 PRINTS PR01466 Bacterial arginine deiminase signature 181 196 4.7E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 4.7E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.7E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 4.7E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_08490 e31d528cb6315469c88933b04eb5485a 408 PRINTS PR01466 Bacterial arginine deiminase signature 153 171 4.7E-55 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JO41_07610 b0d1f9b7ac60772fcc10bc0734d5b1aa 125 Pfam PF02661 Fic/DOC family 4 85 4.8E-12 T 14-10-2018 IPR003812 Fido domain JO41_07610 b0d1f9b7ac60772fcc10bc0734d5b1aa 125 Gene3D G3DSA:1.20.120.1870 1 125 5.0E-37 T 14-10-2018 JO41_07610 b0d1f9b7ac60772fcc10bc0734d5b1aa 125 SUPERFAMILY SSF140931 5 95 2.09E-9 T 14-10-2018 IPR036597 Fido-like domain superfamily JO41_07610 b0d1f9b7ac60772fcc10bc0734d5b1aa 125 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 7 121 8.9E-22 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 JO41_07610 b0d1f9b7ac60772fcc10bc0734d5b1aa 125 PIRSF PIRSF018297 1 125 3.6E-37 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 JO41_03830 50bad1b819523c4d26593a108c7bf5b5 140 SUPERFAMILY SSF54637 3 137 5.92E-40 T 14-10-2018 IPR029069 HotDog domain superfamily JO41_03830 50bad1b819523c4d26593a108c7bf5b5 140 Pfam PF07977 FabA-like domain 9 131 2.8E-24 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JO41_03830 50bad1b819523c4d26593a108c7bf5b5 140 Gene3D G3DSA:3.10.129.10 1 140 1.2E-42 T 14-10-2018 JO41_03800 c7eb7483616ef0c9b3b269c5ddc66a79 193 Gene3D G3DSA:1.10.357.10 3 192 1.9E-29 T 14-10-2018 JO41_03800 c7eb7483616ef0c9b3b269c5ddc66a79 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_03800 c7eb7483616ef0c9b3b269c5ddc66a79 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_03800 c7eb7483616ef0c9b3b269c5ddc66a79 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 9.7E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_03800 c7eb7483616ef0c9b3b269c5ddc66a79 193 SUPERFAMILY SSF46689 7 73 2.12E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_04555 0b481fb437aa3dcef813fe2118abf77b 291 Gene3D G3DSA:3.20.20.140 1 283 1.7E-61 T 14-10-2018 JO41_04555 0b481fb437aa3dcef813fe2118abf77b 291 Pfam PF01026 TatD related DNase 3 278 8.5E-48 T 14-10-2018 IPR001130 TatD family GO:0016788 JO41_04555 0b481fb437aa3dcef813fe2118abf77b 291 PIRSF PIRSF005902 1 281 2.6E-56 T 14-10-2018 IPR001130 TatD family GO:0016788 JO41_04555 0b481fb437aa3dcef813fe2118abf77b 291 SUPERFAMILY SSF51556 2 279 6.01E-55 T 14-10-2018 IPR032466 Metal-dependent hydrolase JO41_04555 0b481fb437aa3dcef813fe2118abf77b 291 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 214 230 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JO41_02300 6fe491330b575347b34e837fbbff2fe1 327 Gene3D G3DSA:2.60.40.1120 190 253 4.3E-5 T 14-10-2018 JO41_00790 368fdf6c56108eb7fd64e7f10dceeafd 520 Pfam PF13416 Bacterial extracellular solute-binding protein 61 351 3.0E-19 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_00790 368fdf6c56108eb7fd64e7f10dceeafd 520 SUPERFAMILY SSF53850 20 518 1.15E-70 T 14-10-2018 JO41_00790 368fdf6c56108eb7fd64e7f10dceeafd 520 Gene3D G3DSA:3.40.190.10 161 516 9.4E-86 T 14-10-2018 JO41_00790 368fdf6c56108eb7fd64e7f10dceeafd 520 Gene3D G3DSA:3.40.190.10 60 431 9.4E-86 T 14-10-2018 JO41_10365 6e00b1b31efd7d3ed155da62ba999173 239 Pfam PF02361 Cobalt transport protein 22 202 1.4E-7 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO41_00710 df5ca277fe607a5452150ee3a66d46c9 211 ProSitePatterns PS00194 Thioredoxin family active site. 100 118 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JO41_00710 df5ca277fe607a5452150ee3a66d46c9 211 Gene3D G3DSA:3.40.30.10 70 210 2.9E-40 T 14-10-2018 JO41_00710 df5ca277fe607a5452150ee3a66d46c9 211 SUPERFAMILY SSF52833 81 210 1.06E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO41_00710 df5ca277fe607a5452150ee3a66d46c9 211 Pfam PF00578 AhpC/TSA family 82 188 1.8E-23 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JO41_01290 4749acdf243c7770feda91f24adbaefc 132 Pfam PF13470 PIN domain 2 110 2.9E-8 T 14-10-2018 IPR002716 PIN domain JO41_01290 4749acdf243c7770feda91f24adbaefc 132 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 112 7.2E-11 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_01290 4749acdf243c7770feda91f24adbaefc 132 SUPERFAMILY SSF88723 2 118 8.41E-10 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 33.621 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 3.4E-65 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 Gene3D G3DSA:3.30.160.20 10 79 6.6E-30 T 14-10-2018 JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 94 164 9.8E-25 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 18 82 8.4E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 Gene3D G3DSA:3.30.230.10 81 173 8.9E-34 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 SUPERFAMILY SSF54768 14 83 8.37E-23 T 14-10-2018 JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 ProSitePatterns PS00585 Ribosomal protein S5 signature. 35 67 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site JO41_04390 3c09263e1590b0e3fa85ec2ccff9f8ea 173 SUPERFAMILY SSF54211 86 166 4.3E-23 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_03705 04d3997b8ed7400efbb4accb0649210e 238 SUPERFAMILY SSF55120 1 211 1.76E-35 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_03705 04d3997b8ed7400efbb4accb0649210e 238 Gene3D G3DSA:3.30.2350.10 1 198 3.4E-34 T 14-10-2018 JO41_03705 04d3997b8ed7400efbb4accb0649210e 238 Pfam PF00849 RNA pseudouridylate synthase 1 156 6.5E-22 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_11530 79d215d3d9fb3f8a043115c2492a2751 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.058 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JO41_11530 79d215d3d9fb3f8a043115c2492a2751 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 145 1.3E-53 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JO41_11530 79d215d3d9fb3f8a043115c2492a2751 150 SUPERFAMILY SSF69500 1 146 1.96E-52 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JO41_11530 79d215d3d9fb3f8a043115c2492a2751 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 1.9E-51 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JO41_11530 79d215d3d9fb3f8a043115c2492a2751 150 Gene3D G3DSA:3.50.80.10 1 150 9.2E-56 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JO41_10450 d7e47a69443dc378d9ba8c29a43e4a3e 176 Gene3D G3DSA:2.160.20.20 8 176 7.7E-7 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily JO41_10450 d7e47a69443dc378d9ba8c29a43e4a3e 176 SUPERFAMILY SSF51126 18 170 1.33E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_11985 2ef74104a4409d1b08786c7d2fe6566b 358 SUPERFAMILY SSF56801 72 342 2.34E-5 T 14-10-2018 JO41_11985 2ef74104a4409d1b08786c7d2fe6566b 358 Gene3D G3DSA:3.40.50.12780 9 343 2.6E-10 T 14-10-2018 JO41_11985 2ef74104a4409d1b08786c7d2fe6566b 358 Pfam PF04443 Acyl-protein synthetase, LuxE 8 356 3.9E-45 T 14-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 JO41_12000 782de7fba69f48a67b6607362634a7c5 432 Gene3D G3DSA:3.40.1080.20 290 432 1.4E-64 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily JO41_12000 782de7fba69f48a67b6607362634a7c5 432 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 272 423 1.2E-67 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain JO41_12000 782de7fba69f48a67b6607362634a7c5 432 Gene3D G3DSA:3.40.1080.10 2 184 1.3E-70 T 14-10-2018 JO41_12000 782de7fba69f48a67b6607362634a7c5 432 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 10 184 1.0E-22 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 JO41_12000 782de7fba69f48a67b6607362634a7c5 432 SUPERFAMILY SSF100950 189 427 9.14E-71 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_12000 782de7fba69f48a67b6607362634a7c5 432 SUPERFAMILY SSF100950 4 223 3.23E-49 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_12000 782de7fba69f48a67b6607362634a7c5 432 Gene3D G3DSA:3.30.750.70 185 289 1.4E-45 T 14-10-2018 JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 Pfam PF08345 Flagellar M-ring protein C-terminal 260 449 5.0E-20 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 PRINTS PR01009 Flagellar M-ring protein signature 200 218 2.9E-5 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 PRINTS PR01009 Flagellar M-ring protein signature 274 292 2.9E-5 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 PRINTS PR01009 Flagellar M-ring protein signature 123 141 2.9E-5 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 PRINTS PR01009 Flagellar M-ring protein signature 155 169 2.9E-5 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 Gene3D G3DSA:3.30.300.30 126 223 1.0E-5 T 14-10-2018 JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 Pfam PF01514 Secretory protein of YscJ/FliF family 31 224 7.5E-44 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF JO41_01345 71d7bee7736d69df20b70b6eb8297f71 567 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 566 4.9E-107 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JO41_03940 2c1a843943f3f37b26d1cc7494851ece 352 Pfam PF13303 Phosphotransferase system, EIIC 17 348 5.9E-83 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JO41_06085 56de2ec2c03936360699895baa8ded89 521 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 300 416 5.3E-11 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 SUPERFAMILY SSF53738 300 406 2.04E-12 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 Gene3D G3DSA:3.40.120.10 293 415 1.0E-25 T 14-10-2018 JO41_06085 56de2ec2c03936360699895baa8ded89 521 Gene3D G3DSA:3.30.310.50 423 517 1.6E-6 T 14-10-2018 JO41_06085 56de2ec2c03936360699895baa8ded89 521 SUPERFAMILY SSF53738 187 296 1.69E-22 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 Gene3D G3DSA:3.40.120.10 213 289 2.4E-24 T 14-10-2018 JO41_06085 56de2ec2c03936360699895baa8ded89 521 Gene3D G3DSA:3.40.120.10 15 165 1.5E-32 T 14-10-2018 JO41_06085 56de2ec2c03936360699895baa8ded89 521 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 9 153 9.8E-28 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 188 293 3.4E-20 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 SUPERFAMILY SSF53738 12 153 2.86E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 111 125 2.2E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 246 259 2.2E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 275 290 2.2E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_06085 56de2ec2c03936360699895baa8ded89 521 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 211 230 2.2E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JO41_01720 fd00a6d69aead16695f164e0c5fb4659 342 SUPERFAMILY SSF53448 18 228 1.58E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_01720 fd00a6d69aead16695f164e0c5fb4659 342 Gene3D G3DSA:3.90.550.10 16 231 3.5E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_01720 fd00a6d69aead16695f164e0c5fb4659 342 Pfam PF00535 Glycosyl transferase family 2 21 188 5.7E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO41_00850 652fb354ab050b024d685caeb0b0271e 220 Pfam PF00005 ABC transporter 32 171 6.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_00850 652fb354ab050b024d685caeb0b0271e 220 SUPERFAMILY SSF52540 16 218 5.6E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00850 652fb354ab050b024d685caeb0b0271e 220 Gene3D G3DSA:3.40.50.300 12 219 8.9E-60 T 14-10-2018 JO41_00850 652fb354ab050b024d685caeb0b0271e 220 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_00850 652fb354ab050b024d685caeb0b0271e 220 SMART SM00382 38 220 8.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04535 d6c4f3506a0e913efdfc5525f370797a 579 SUPERFAMILY SSF48452 447 549 2.28E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04535 d6c4f3506a0e913efdfc5525f370797a 579 Gene3D G3DSA:1.25.40.10 360 565 2.6E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04535 d6c4f3506a0e913efdfc5525f370797a 579 Gene3D G3DSA:1.25.40.10 33 324 7.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_04535 d6c4f3506a0e913efdfc5525f370797a 579 SMART SM00028 65 98 360.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04535 d6c4f3506a0e913efdfc5525f370797a 579 SMART SM00028 474 507 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04535 d6c4f3506a0e913efdfc5525f370797a 579 SMART SM00028 511 544 0.046 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_04705 c2c0fbfc2c6199f88fa4d98a994a47bd 395 SUPERFAMILY SSF53383 1 392 1.63E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_04705 c2c0fbfc2c6199f88fa4d98a994a47bd 395 Gene3D G3DSA:3.90.1150.10 14 386 2.5E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_04705 c2c0fbfc2c6199f88fa4d98a994a47bd 395 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 390 4.9E-122 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 JO41_04705 c2c0fbfc2c6199f88fa4d98a994a47bd 395 Pfam PF00155 Aminotransferase class I and II 33 385 9.5E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JO41_04705 c2c0fbfc2c6199f88fa4d98a994a47bd 395 Gene3D G3DSA:3.40.640.10 70 294 2.5E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_11915 a0f23b6a8b46aedd93dac46ef4efc774 287 Pfam PF00950 ABC 3 transport family 12 266 8.1E-80 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 JO41_11915 a0f23b6a8b46aedd93dac46ef4efc774 287 Gene3D G3DSA:1.10.3470.10 40 266 3.0E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_11915 a0f23b6a8b46aedd93dac46ef4efc774 287 SUPERFAMILY SSF81345 7 261 9.55E-40 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JO41_12225 50f78fd9d3f43ffb3af6f0428b7005a1 631 Gene3D G3DSA:1.25.40.10 526 628 4.5E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10330 749c1c0b0800a9f3fe5f51675a285ae3 293 Pfam PF12784 PD-(D/E)XK nuclease family transposase 14 235 7.7E-59 T 14-10-2018 JO41_10330 749c1c0b0800a9f3fe5f51675a285ae3 293 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 15 291 7.7E-41 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_06900 f112afdc49c30c8617c05c338f6ccab5 106 Gene3D G3DSA:3.30.2310.20 1 100 1.7E-18 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_06900 f112afdc49c30c8617c05c338f6ccab5 106 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 91 7.7E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_06900 f112afdc49c30c8617c05c338f6ccab5 106 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 96 1.2E-12 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JO41_09055 53403d49e57399473f9bd13d3c1f5641 274 SUPERFAMILY SSF52374 20 177 7.51E-19 T 14-10-2018 JO41_09055 53403d49e57399473f9bd13d3c1f5641 274 Pfam PF06574 FAD synthetase 17 169 4.4E-34 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JO41_09055 53403d49e57399473f9bd13d3c1f5641 274 Gene3D G3DSA:3.40.50.620 9 189 1.1E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_04700 82f19769b56ea8303174000c02bc920f 279 SMART SM01324 64 144 1.9E-15 T 14-10-2018 IPR025582 YARHG domain JO41_04700 82f19769b56ea8303174000c02bc920f 279 Pfam PF13308 YARHG domain 72 143 1.5E-16 T 14-10-2018 IPR025582 YARHG domain JO41_04700 82f19769b56ea8303174000c02bc920f 279 Gene3D G3DSA:1.20.58.1690 54 142 3.3E-14 T 14-10-2018 IPR038434 YARHG domain superfamily JO41_00345 3211b0b438a02ed8a6b0ab197367ad26 292 PIRSF PIRSF036894 1 279 5.1E-65 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 JO41_00345 3211b0b438a02ed8a6b0ab197367ad26 292 SUPERFAMILY SSF51182 1 256 3.26E-58 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JO41_00345 3211b0b438a02ed8a6b0ab197367ad26 292 Pfam PF01238 Phosphomannose isomerase type I 46 166 4.2E-7 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JO41_00345 3211b0b438a02ed8a6b0ab197367ad26 292 Gene3D G3DSA:2.60.120.10 1 188 2.0E-60 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_09130 b92539d4a97170247b418f07c53acbf7 526 SUPERFAMILY SSF52540 276 513 4.79E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09130 b92539d4a97170247b418f07c53acbf7 526 Pfam PF00005 ABC transporter 293 454 6.2E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09130 b92539d4a97170247b418f07c53acbf7 526 SUPERFAMILY SSF52540 6 242 2.07E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09130 b92539d4a97170247b418f07c53acbf7 526 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_09130 b92539d4a97170247b418f07c53acbf7 526 Gene3D G3DSA:3.40.50.300 274 519 9.6E-39 T 14-10-2018 JO41_09130 b92539d4a97170247b418f07c53acbf7 526 Gene3D G3DSA:3.40.50.300 2 257 3.6E-52 T 14-10-2018 JO41_09130 b92539d4a97170247b418f07c53acbf7 526 Pfam PF00005 ABC transporter 23 189 9.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_09130 b92539d4a97170247b418f07c53acbf7 526 SMART SM00382 32 236 6.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_10185 a5a3e3893e6ef43b9624aa1857a84839 195 Pfam PF01965 DJ-1/PfpI family 3 176 4.7E-37 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JO41_10185 a5a3e3893e6ef43b9624aa1857a84839 195 Gene3D G3DSA:3.40.50.880 1 194 4.6E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_10185 a5a3e3893e6ef43b9624aa1857a84839 195 SUPERFAMILY SSF52317 1 191 6.11E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_00575 15876162eacb6ea62e9d565ff72813c0 344 SUPERFAMILY SSF55383 32 87 4.18E-7 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily JO41_00575 15876162eacb6ea62e9d565ff72813c0 344 SUPERFAMILY SSF53187 121 338 3.77E-42 T 14-10-2018 JO41_00575 15876162eacb6ea62e9d565ff72813c0 344 SMART SM00646 195 335 2.8E-36 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JO41_00575 15876162eacb6ea62e9d565ff72813c0 344 Gene3D G3DSA:3.40.630.40 116 342 5.1E-58 T 14-10-2018 JO41_00575 15876162eacb6ea62e9d565ff72813c0 344 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 121 335 1.9E-48 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JO41_00150 59e08819697a95965c1430a9ecc96401 162 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 38 153 1.9E-8 T 14-10-2018 JO41_03270 5772e745bd6aec885c672ca257b12cd9 359 Gene3D G3DSA:3.40.50.2300 38 301 6.1E-92 T 14-10-2018 JO41_03270 5772e745bd6aec885c672ca257b12cd9 359 SUPERFAMILY SSF53822 42 272 8.95E-18 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JO41_03270 5772e745bd6aec885c672ca257b12cd9 359 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 32 332 1.2E-59 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 JO41_03270 5772e745bd6aec885c672ca257b12cd9 359 Gene3D G3DSA:3.40.50.2300 141 337 6.1E-92 T 14-10-2018 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 77 2.9E-32 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 30.163 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 SUPERFAMILY SSF54364 6 80 1.18E-29 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 Gene3D G3DSA:3.30.110.10 81 173 1.3E-35 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 170 1.8E-35 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 172 8.3E-67 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 SUPERFAMILY SSF55200 86 173 2.49E-31 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JO41_03865 84869f62dc971892f8354e38b46ebea1 173 Gene3D G3DSA:3.10.20.80 4 80 2.8E-32 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JO41_07170 8962bea8aa3f5fb0db8a1f109a2c04b6 349 Gene3D G3DSA:3.60.10.10 31 346 3.2E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO41_07170 8962bea8aa3f5fb0db8a1f109a2c04b6 349 SUPERFAMILY SSF56219 36 346 6.12E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JO41_07170 8962bea8aa3f5fb0db8a1f109a2c04b6 349 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 87 286 2.2E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JO41_10760 110cd86ed43430c88cab200159ae5d32 232 SUPERFAMILY SSF81301 31 221 4.25E-50 T 14-10-2018 JO41_10760 110cd86ed43430c88cab200159ae5d32 232 Pfam PF04607 Region found in RelA / SpoT proteins 69 188 5.6E-32 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO41_10760 110cd86ed43430c88cab200159ae5d32 232 Gene3D G3DSA:3.30.460.10 22 173 2.4E-48 T 14-10-2018 JO41_10760 110cd86ed43430c88cab200159ae5d32 232 SMART SM00954 68 191 2.4E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JO41_10760 110cd86ed43430c88cab200159ae5d32 232 Gene3D G3DSA:1.10.287.860 174 222 7.4E-10 T 14-10-2018 JO41_07880 cb68e0e06ebe203356486f2462d49928 606 SUPERFAMILY SSF161098 21 308 3.27E-38 T 14-10-2018 IPR035906 MetI-like superfamily JO41_07880 cb68e0e06ebe203356486f2462d49928 606 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 419 593 7.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_07880 cb68e0e06ebe203356486f2462d49928 606 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 301 3.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_07880 cb68e0e06ebe203356486f2462d49928 606 Gene3D G3DSA:1.10.3720.10 323 593 1.4E-28 T 14-10-2018 IPR035906 MetI-like superfamily JO41_07880 cb68e0e06ebe203356486f2462d49928 606 SUPERFAMILY SSF161098 326 601 1.12E-33 T 14-10-2018 IPR035906 MetI-like superfamily JO41_07880 cb68e0e06ebe203356486f2462d49928 606 Gene3D G3DSA:1.10.3720.10 19 312 3.0E-38 T 14-10-2018 IPR035906 MetI-like superfamily JO41_02210 0b6872c88fc8efab9adfbd2f90605b1a 242 Pfam PF04335 VirB8 protein 32 233 4.3E-27 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 JO41_02210 0b6872c88fc8efab9adfbd2f90605b1a 242 SUPERFAMILY SSF54427 104 232 1.05E-10 T 14-10-2018 IPR032710 NTF2-like domain superfamily JO41_03480 efb164a3f0d4d581c30707efe0a8cbab 660 Pfam PF13200 Putative glycosyl hydrolase domain 330 648 4.9E-91 T 14-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 JO41_03480 efb164a3f0d4d581c30707efe0a8cbab 660 SUPERFAMILY SSF51445 339 484 2.67E-5 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JO41_03480 efb164a3f0d4d581c30707efe0a8cbab 660 Gene3D G3DSA:2.130.10.10 3 165 2.6E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JO41_03480 efb164a3f0d4d581c30707efe0a8cbab 660 SUPERFAMILY SSF110296 39 138 2.75E-6 T 14-10-2018 JO41_09345 1ff9394738427b0b5f05509aa2c477ce 577 Pfam PF06826 Predicted Permease Membrane Region 37 202 1.1E-30 T 14-10-2018 IPR006512 YidE/YbjL duplication JO41_09345 1ff9394738427b0b5f05509aa2c477ce 577 Pfam PF06826 Predicted Permease Membrane Region 404 571 1.2E-32 T 14-10-2018 IPR006512 YidE/YbjL duplication JO41_09345 1ff9394738427b0b5f05509aa2c477ce 577 Gene3D G3DSA:3.30.70.1450 205 309 2.6E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_09345 1ff9394738427b0b5f05509aa2c477ce 577 SUPERFAMILY SSF116726 243 308 1.7E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_09345 1ff9394738427b0b5f05509aa2c477ce 577 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 408 558 2.4E-27 T 14-10-2018 IPR006512 YidE/YbjL duplication JO41_09345 1ff9394738427b0b5f05509aa2c477ce 577 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 41 192 2.2E-21 T 14-10-2018 IPR006512 YidE/YbjL duplication JO41_09345 1ff9394738427b0b5f05509aa2c477ce 577 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 25 574 3.9E-165 T 14-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 JO41_00545 2f62131cf48cb147d2e1b9f92c8b217d 545 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 523 16.893 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JO41_00545 2f62131cf48cb147d2e1b9f92c8b217d 545 Gene3D G3DSA:3.60.110.10 230 507 9.7E-17 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO41_00545 2f62131cf48cb147d2e1b9f92c8b217d 545 Pfam PF00795 Carbon-nitrogen hydrolase 234 501 2.0E-24 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JO41_00545 2f62131cf48cb147d2e1b9f92c8b217d 545 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 64 483 9.3E-97 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JO41_00545 2f62131cf48cb147d2e1b9f92c8b217d 545 SUPERFAMILY SSF56317 230 501 1.44E-37 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JO41_04370 daf155fb41dcf16c6d6da4765721fea0 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04370 daf155fb41dcf16c6d6da4765721fea0 37 SUPERFAMILY SSF57840 1 37 2.09E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04370 daf155fb41dcf16c6d6da4765721fea0 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 8.4E-24 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04370 daf155fb41dcf16c6d6da4765721fea0 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.585 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04370 daf155fb41dcf16c6d6da4765721fea0 37 Pfam PF00444 Ribosomal protein L36 1 37 2.7E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_04370 daf155fb41dcf16c6d6da4765721fea0 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 7.0E-9 T 14-10-2018 JO41_08790 e1bfb72e6942596bf51bfcdc946cb216 164 Gene3D G3DSA:3.40.50.360 2 164 2.3E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_08790 e1bfb72e6942596bf51bfcdc946cb216 164 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JO41_08790 e1bfb72e6942596bf51bfcdc946cb216 164 SUPERFAMILY SSF52218 3 162 3.02E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_08790 e1bfb72e6942596bf51bfcdc946cb216 164 PIRSF PIRSF038996 1 164 3.2E-38 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 JO41_08790 e1bfb72e6942596bf51bfcdc946cb216 164 Pfam PF00258 Flavodoxin 6 130 2.5E-14 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JO41_03775 8d20d67367affd2772d67df4f31edd06 229 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 229 8.8E-47 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JO41_03775 8d20d67367affd2772d67df4f31edd06 229 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 113 120 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JO41_03775 8d20d67367affd2772d67df4f31edd06 229 SUPERFAMILY SSF53448 5 229 1.19E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_03775 8d20d67367affd2772d67df4f31edd06 229 Gene3D G3DSA:3.90.550.10 2 229 3.6E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_11650 d2139430004d092f1a3c0dd2155bf3f2 395 SUPERFAMILY SSF118215 11 381 4.71E-67 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_11650 d2139430004d092f1a3c0dd2155bf3f2 395 Gene3D G3DSA:1.10.3860.10 3 384 8.4E-46 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JO41_11650 d2139430004d092f1a3c0dd2155bf3f2 395 PRINTS PR00173 Glutamate-aspartate symporter signature 274 300 2.5E-8 T 14-10-2018 JO41_11650 d2139430004d092f1a3c0dd2155bf3f2 395 PRINTS PR00173 Glutamate-aspartate symporter signature 338 358 2.5E-8 T 14-10-2018 JO41_11650 d2139430004d092f1a3c0dd2155bf3f2 395 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 2.5E-8 T 14-10-2018 JO41_11650 d2139430004d092f1a3c0dd2155bf3f2 395 Pfam PF00375 Sodium:dicarboxylate symporter family 11 381 7.4E-71 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JO41_08650 34feb9b7a4fde442b3800261a02ca35b 482 Pfam PF01458 Uncharacterized protein family (UPF0051) 228 453 3.1E-66 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JO41_08650 34feb9b7a4fde442b3800261a02ca35b 482 SUPERFAMILY SSF101960 48 479 2.62E-126 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JO41_08650 34feb9b7a4fde442b3800261a02ca35b 482 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 28 473 8.6E-203 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 JO41_03500 13bc27cb2ba0ec0ed5074d46f18ea7c9 335 SUPERFAMILY SSF53659 1 332 2.06E-82 T 14-10-2018 JO41_03500 13bc27cb2ba0ec0ed5074d46f18ea7c9 335 Gene3D G3DSA:3.40.50.10750 143 305 1.1E-122 T 14-10-2018 JO41_03500 13bc27cb2ba0ec0ed5074d46f18ea7c9 335 PIRSF PIRSF000428 1 335 9.1E-102 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JO41_03500 13bc27cb2ba0ec0ed5074d46f18ea7c9 335 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 329 6.3E-113 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JO41_03500 13bc27cb2ba0ec0ed5074d46f18ea7c9 335 Gene3D G3DSA:3.40.50.10950 9 332 1.1E-122 T 14-10-2018 JO41_03500 13bc27cb2ba0ec0ed5074d46f18ea7c9 335 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 328 2.5E-108 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JO41_08840 920d6cd170d17cc445db3293bf9bd23b 211 Pfam PF13367 Protease prsW family 27 188 9.9E-11 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 JO41_00905 22860ba1718f174d53b5992d4071d42d 194 ProSitePatterns PS00211 ABC transporters family signature. 117 131 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_00905 22860ba1718f174d53b5992d4071d42d 194 SUPERFAMILY SSF52540 1 181 8.11E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_00905 22860ba1718f174d53b5992d4071d42d 194 Gene3D G3DSA:3.40.50.300 1 190 2.0E-46 T 14-10-2018 JO41_00905 22860ba1718f174d53b5992d4071d42d 194 SMART SM00382 20 194 4.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_00905 22860ba1718f174d53b5992d4071d42d 194 Pfam PF00005 ABC transporter 12 144 2.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_01425 2b83a336858cbbe3d0e8db8a67d69f85 329 SUPERFAMILY SSF51395 1 319 1.28E-45 T 14-10-2018 JO41_01425 2b83a336858cbbe3d0e8db8a67d69f85 329 Gene3D G3DSA:3.20.20.70 1 248 1.2E-55 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_01425 2b83a336858cbbe3d0e8db8a67d69f85 329 PIRSF PIRSF006621 1 328 1.1E-51 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JO41_01425 2b83a336858cbbe3d0e8db8a67d69f85 329 Pfam PF01207 Dihydrouridine synthase (Dus) 4 315 2.5E-43 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JO41_12150 b8aa1799edbbd629c793c778a1842a07 216 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 12 188 2.1E-44 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JO41_12150 b8aa1799edbbd629c793c778a1842a07 216 Pfam PF00929 Exonuclease 17 172 1.9E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JO41_12150 b8aa1799edbbd629c793c778a1842a07 216 SMART SM00479 15 181 1.0E-48 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JO41_12150 b8aa1799edbbd629c793c778a1842a07 216 Gene3D G3DSA:3.30.420.10 11 180 4.2E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_12150 b8aa1799edbbd629c793c778a1842a07 216 SUPERFAMILY SSF53098 13 182 4.25E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_11765 797f5027ea67db4306fef6d4b5ca2da1 412 SUPERFAMILY SSF56300 57 342 4.3E-22 T 14-10-2018 JO41_11765 797f5027ea67db4306fef6d4b5ca2da1 412 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 56 321 7.8E-52 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA JO41_11765 797f5027ea67db4306fef6d4b5ca2da1 412 SMART SM00854 55 321 3.8E-37 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA JO41_11590 ee2df9864865bf8e9abae917b50738c0 308 Pfam PF14903 WG containing repeat 113 143 5.2E-4 T 14-10-2018 IPR032774 WG containing repeat JO41_11590 ee2df9864865bf8e9abae917b50738c0 308 Pfam PF14903 WG containing repeat 35 63 1.9E-7 T 14-10-2018 IPR032774 WG containing repeat JO41_11590 ee2df9864865bf8e9abae917b50738c0 308 Pfam PF14903 WG containing repeat 184 199 0.0031 T 14-10-2018 IPR032774 WG containing repeat JO41_11920 76fe9f8d5b7f94c3df955f852bd32f35 149 Pfam PF04463 Protein of unknown function (DUF523) 2 136 5.1E-44 T 14-10-2018 IPR007553 Domain of unknown function DUF523 JO41_01090 c930e6acf7f1a08a7b076456438a47a1 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JO41_01090 c930e6acf7f1a08a7b076456438a47a1 384 Gene3D G3DSA:1.20.1090.10 185 383 4.1E-64 T 14-10-2018 JO41_01090 c930e6acf7f1a08a7b076456438a47a1 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JO41_01090 c930e6acf7f1a08a7b076456438a47a1 384 Gene3D G3DSA:3.40.50.1970 1 183 5.9E-48 T 14-10-2018 JO41_01090 c930e6acf7f1a08a7b076456438a47a1 384 SUPERFAMILY SSF56796 3 380 3.93E-112 T 14-10-2018 JO41_01090 c930e6acf7f1a08a7b076456438a47a1 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 369 1.6E-108 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JO41_02795 c7272841a099bfd1f027fb8e1f0894d9 543 Pfam PF08323 Starch synthase catalytic domain 10 253 1.9E-34 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JO41_02795 c7272841a099bfd1f027fb8e1f0894d9 543 Pfam PF00534 Glycosyl transferases group 1 341 477 2.2E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JO41_02795 c7272841a099bfd1f027fb8e1f0894d9 543 SUPERFAMILY SSF53756 10 494 2.92E-57 T 14-10-2018 JO41_02795 c7272841a099bfd1f027fb8e1f0894d9 543 Gene3D G3DSA:3.40.50.2000 280 526 1.9E-79 T 14-10-2018 JO41_02795 c7272841a099bfd1f027fb8e1f0894d9 543 Gene3D G3DSA:3.40.50.2000 10 540 1.9E-79 T 14-10-2018 JO41_06070 bd24d007d08cd52d83f53aac49437d85 75 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 11 73 2.0E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JO41_06070 bd24d007d08cd52d83f53aac49437d85 75 SUPERFAMILY SSF117916 4 75 2.78E-24 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JO41_06070 bd24d007d08cd52d83f53aac49437d85 75 Pfam PF01106 NifU-like domain 7 73 3.6E-27 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JO41_06070 bd24d007d08cd52d83f53aac49437d85 75 Gene3D G3DSA:3.30.300.130 1 75 3.6E-28 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JO41_01670 806dd9d31fc8ee4ce19de90ff6447ace 288 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 15 287 5.1E-43 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_01670 806dd9d31fc8ee4ce19de90ff6447ace 288 Pfam PF12784 PD-(D/E)XK nuclease family transposase 14 235 5.1E-59 T 14-10-2018 JO41_06075 17ce90ba1fa2beb96683ed75ffa6be93 1553 SUPERFAMILY SSF81296 927 1005 9.1E-7 T 14-10-2018 IPR014756 Immunoglobulin E-set JO41_06075 17ce90ba1fa2beb96683ed75ffa6be93 1553 Pfam PF12245 Bacterial Ig-like domain (group 3) 810 827 3.6 T 14-10-2018 IPR022038 Bacterial Ig-like domain JO41_06075 17ce90ba1fa2beb96683ed75ffa6be93 1553 Pfam PF12245 Bacterial Ig-like domain (group 3) 1090 1116 0.0027 T 14-10-2018 IPR022038 Bacterial Ig-like domain JO41_06075 17ce90ba1fa2beb96683ed75ffa6be93 1553 Gene3D G3DSA:2.60.40.10 927 1020 5.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_06075 17ce90ba1fa2beb96683ed75ffa6be93 1553 Gene3D G3DSA:2.60.40.10 78 172 1.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_10840 cf7865c56a80cc9dccf867f25862a4c8 165 Pfam PF03477 ATP cone domain 50 138 1.2E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JO41_10840 cf7865c56a80cc9dccf867f25862a4c8 165 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 158 78.479 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JO41_10840 cf7865c56a80cc9dccf867f25862a4c8 165 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 148 4.3E-56 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JO41_05750 681cb40cc12320a5776771db287b75c9 264 SMART SM00382 29 218 7.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_05750 681cb40cc12320a5776771db287b75c9 264 SUPERFAMILY SSF52540 5 222 3.11E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05750 681cb40cc12320a5776771db287b75c9 264 Gene3D G3DSA:3.40.50.300 5 244 2.1E-60 T 14-10-2018 JO41_05750 681cb40cc12320a5776771db287b75c9 264 Pfam PF00005 ABC transporter 20 169 4.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_05750 681cb40cc12320a5776771db287b75c9 264 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_01195 29646fa40c230523e1fb6d6219355c95 417 Pfam PF00860 Permease family 18 381 1.2E-81 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JO41_01195 29646fa40c230523e1fb6d6219355c95 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 406 6.9E-101 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JO41_10375 f636d1a5fd33e84918a437204ae8c558 198 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 8 196 1.1E-52 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_10375 f636d1a5fd33e84918a437204ae8c558 198 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 13 195 6.5E-36 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_00395 91c3da21df871e04737fea3524390858 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 280 5.3E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_00395 91c3da21df871e04737fea3524390858 285 SUPERFAMILY SSF161098 20 285 2.9E-64 T 14-10-2018 IPR035906 MetI-like superfamily JO41_00395 91c3da21df871e04737fea3524390858 285 Gene3D G3DSA:1.10.3720.10 12 277 1.3E-57 T 14-10-2018 IPR035906 MetI-like superfamily JO41_08860 637dcfbc45137311f38d71354a642955 106 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 14 92 8.5E-29 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system JO41_08860 637dcfbc45137311f38d71354a642955 106 Gene3D G3DSA:3.10.450.530 4 95 2.9E-21 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily JO41_00565 86f13e965466293b1bf888bd0ec8e7c3 352 PIRSF PIRSF002892 1 351 6.8E-148 T 14-10-2018 IPR016369 Flagellar filament outer layer protein FlaA, Spirochaetes JO41_00565 86f13e965466293b1bf888bd0ec8e7c3 352 Pfam PF04620 Flagellar filament outer layer protein Flaa 44 291 8.0E-88 T 14-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 JO41_11940 6ebcfa9b9e6a93acd44b653c9da2fe66 168 PIRSF PIRSF015034 1 168 6.6E-34 T 14-10-2018 IPR025542 YacH protein JO41_11940 6ebcfa9b9e6a93acd44b653c9da2fe66 168 SUPERFAMILY SSF46600 134 163 2.62E-6 T 14-10-2018 IPR036876 UVR domain superfamily JO41_11940 6ebcfa9b9e6a93acd44b653c9da2fe66 168 Pfam PF02151 UvrB/uvrC motif 135 163 5.4E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 JO41_03960 16c20bdeafd2f391a6f630495c2fab61 244 Pfam PF13346 ABC-2 family transporter protein 58 183 4.5E-6 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like JO41_09545 731e2b539da4f569588d995ed3a4c064 302 Pfam PF13478 XdhC Rossmann domain 105 280 1.5E-36 T 14-10-2018 IPR027051 XdhC Rossmann domain JO41_09545 731e2b539da4f569588d995ed3a4c064 302 Pfam PF02625 XdhC and CoxI family 14 73 8.3E-17 T 14-10-2018 IPR003777 XdhC- CoxI JO41_09545 731e2b539da4f569588d995ed3a4c064 302 Gene3D G3DSA:3.40.50.720 104 169 2.7E-13 T 14-10-2018 JO41_09545 731e2b539da4f569588d995ed3a4c064 302 Gene3D G3DSA:3.40.50.720 170 286 3.5E-30 T 14-10-2018 JO41_01205 f762fdfaebfaa31f3876773a601d999f 449 Pfam PF03616 Sodium/glutamate symporter 15 340 7.0E-21 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO41_02050 0bf5d404160d5a5b5c7ea5703637cd66 270 Gene3D G3DSA:3.40.50.300 88 265 5.1E-25 T 14-10-2018 JO41_02050 0bf5d404160d5a5b5c7ea5703637cd66 270 SMART SM00382 119 251 1.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_02050 0bf5d404160d5a5b5c7ea5703637cd66 270 SUPERFAMILY SSF52540 54 250 4.07E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02050 0bf5d404160d5a5b5c7ea5703637cd66 270 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 123 194 2.0E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_10710 f6eb85c7814026065622053ae1ed7370 166 PIRSF PIRSF037497 3 166 4.1E-33 T 14-10-2018 IPR017225 Cell shape-determining protein MreD, predicted JO41_10710 f6eb85c7814026065622053ae1ed7370 166 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 154 4.3E-16 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JO41_10710 f6eb85c7814026065622053ae1ed7370 166 Pfam PF04093 rod shape-determining protein MreD 2 154 9.0E-14 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JO41_05845 c0bde5460b6d753c42e4ee4106cfdf9e 210 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 8 201 1.9E-22 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JO41_05845 c0bde5460b6d753c42e4ee4106cfdf9e 210 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 6 207 15.798 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JO41_05845 c0bde5460b6d753c42e4ee4106cfdf9e 210 Gene3D G3DSA:3.40.50.300 1 209 2.2E-37 T 14-10-2018 JO41_05845 c0bde5460b6d753c42e4ee4106cfdf9e 210 SUPERFAMILY SSF52540 6 207 8.81E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05845 c0bde5460b6d753c42e4ee4106cfdf9e 210 Pfam PF01121 Dephospho-CoA kinase 8 171 1.7E-19 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JO41_12190 4051663fabe2cbff5b3a02a1ce38112b 475 Gene3D G3DSA:3.65.10.10 12 461 3.4E-107 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO41_12190 4051663fabe2cbff5b3a02a1ce38112b 475 Gene3D G3DSA:3.65.10.10 20 246 3.4E-107 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JO41_12190 4051663fabe2cbff5b3a02a1ce38112b 475 SUPERFAMILY SSF55205 6 469 6.38E-88 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JO41_12190 4051663fabe2cbff5b3a02a1ce38112b 475 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 470 27.2 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JO41_12190 4051663fabe2cbff5b3a02a1ce38112b 475 PIRSF PIRSF000505 1 474 3.7E-101 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JO41_12190 4051663fabe2cbff5b3a02a1ce38112b 475 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 422 1.6E-89 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JO41_12190 4051663fabe2cbff5b3a02a1ce38112b 475 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 464 1.5E-82 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JO41_07070 02f2e4ff7dfd733fc3c1b49678b31dad 520 Gene3D G3DSA:3.40.1080.10 1 250 3.4E-95 T 14-10-2018 JO41_07070 02f2e4ff7dfd733fc3c1b49678b31dad 520 Gene3D G3DSA:3.40.1080.10 251 515 1.3E-117 T 14-10-2018 JO41_07070 02f2e4ff7dfd733fc3c1b49678b31dad 520 PIRSF PIRSF009451 1 515 4.9E-215 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 JO41_07070 02f2e4ff7dfd733fc3c1b49678b31dad 520 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 49 512 9.0E-197 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 JO41_07070 02f2e4ff7dfd733fc3c1b49678b31dad 520 SUPERFAMILY SSF100950 6 244 9.22E-66 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_07070 02f2e4ff7dfd733fc3c1b49678b31dad 520 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 45 514 5.2E-207 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 JO41_07070 02f2e4ff7dfd733fc3c1b49678b31dad 520 SUPERFAMILY SSF100950 249 513 1.89E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JO41_04200 caff9c349fba0d4761eb1460ec9560bd 246 Pfam PF00849 RNA pseudouridylate synthase 15 168 4.2E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_04200 caff9c349fba0d4761eb1460ec9560bd 246 SUPERFAMILY SSF55120 7 243 1.76E-58 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_04200 caff9c349fba0d4761eb1460ec9560bd 246 Gene3D G3DSA:3.30.2350.10 7 246 2.3E-65 T 14-10-2018 JO41_04200 caff9c349fba0d4761eb1460ec9560bd 246 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 3 243 1.2E-58 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_12855 5113e9a8b53a21ed4a58f25d9bfed46b 111 Pfam PF10665 Minor capsid protein 5 109 2.6E-18 T 14-10-2018 IPR019612 Minor capsid protein, putative JO41_08190 5113e9a8b53a21ed4a58f25d9bfed46b 111 Pfam PF10665 Minor capsid protein 5 109 2.6E-18 T 14-10-2018 IPR019612 Minor capsid protein, putative JO41_09510 20de906b261d8eee7852ab1450dde553 299 Gene3D G3DSA:3.40.50.300 32 274 2.5E-55 T 14-10-2018 JO41_09510 20de906b261d8eee7852ab1450dde553 299 PIRSF PIRSF003092 1 297 1.2E-83 T 14-10-2018 IPR025501 ATP binding protein MinD JO41_09510 20de906b261d8eee7852ab1450dde553 299 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 35 252 7.1E-21 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JO41_09510 20de906b261d8eee7852ab1450dde553 299 SUPERFAMILY SSF52540 31 278 2.72E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09270 cc96abbcd1f28c3a9891a7776b3fa127 460 SUPERFAMILY SSF161098 200 442 9.81E-50 T 14-10-2018 IPR035906 MetI-like superfamily JO41_09270 cc96abbcd1f28c3a9891a7776b3fa127 460 SUPERFAMILY SSF160964 95 204 7.32E-15 T 14-10-2018 JO41_09270 cc96abbcd1f28c3a9891a7776b3fa127 460 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 239 445 1.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_09270 cc96abbcd1f28c3a9891a7776b3fa127 460 Gene3D G3DSA:1.10.3720.10 196 458 4.5E-60 T 14-10-2018 IPR035906 MetI-like superfamily JO41_07995 a61c52b8ec73adb718cc6d8c3bda22ae 443 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 8 419 7.2E-173 T 14-10-2018 IPR021228 Protein of unknown function DUF2791 JO41_07995 a61c52b8ec73adb718cc6d8c3bda22ae 443 SUPERFAMILY SSF52540 34 353 6.65E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_10235 86d73f980eb80dd5f5a8f36585154724 238 Gene3D G3DSA:3.40.50.720 1 137 1.3E-24 T 14-10-2018 JO41_10235 86d73f980eb80dd5f5a8f36585154724 238 Pfam PF02254 TrkA-N domain 5 119 1.9E-17 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JO41_10235 86d73f980eb80dd5f5a8f36585154724 238 SUPERFAMILY SSF51735 2 131 3.15E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_10235 86d73f980eb80dd5f5a8f36585154724 238 Gene3D G3DSA:3.30.70.1450 138 215 7.6E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_10235 86d73f980eb80dd5f5a8f36585154724 238 Pfam PF02080 TrkA-C domain 149 210 1.6E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JO41_10235 86d73f980eb80dd5f5a8f36585154724 238 SUPERFAMILY SSF116726 137 213 3.4E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JO41_00095 990025a96b45a423aec39ac63e19896b 352 SUPERFAMILY SSF48452 8 78 2.66E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00095 990025a96b45a423aec39ac63e19896b 352 Pfam PF07998 Peptidase family M54 215 345 8.1E-12 T 14-10-2018 IPR012962 Peptidase M54, archaemetzincin GO:0008270 JO41_00095 990025a96b45a423aec39ac63e19896b 352 Gene3D G3DSA:1.25.40.10 3 88 1.6E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00095 990025a96b45a423aec39ac63e19896b 352 Gene3D G3DSA:3.40.390.10 186 349 7.5E-22 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 JO41_05050 61f83b7f4a9e926b4dd8ce70265dc700 99 Gene3D G3DSA:3.30.2310.20 1 96 3.0E-14 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_05050 61f83b7f4a9e926b4dd8ce70265dc700 99 SUPERFAMILY SSF143011 3 85 7.06E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_08855 9689c027d7fe5ae4a83b11b46093e3e3 224 Pfam PF06149 Protein of unknown function (DUF969) 4 216 1.0E-82 T 14-10-2018 IPR010374 Protein of unknown function DUF969 JO41_07135 4fd460834f2ae3a32ee81a9b9dbc0be5 657 Pfam PF03961 Flagellar Assembly Protein A 181 631 2.9E-118 T 14-10-2018 IPR005646 Flagellar assembly protein A JO41_07135 4fd460834f2ae3a32ee81a9b9dbc0be5 657 Pfam PF14804 Jag N-terminus 26 74 2.9E-14 T 14-10-2018 IPR032782 Jag, N-terminal JO41_07135 4fd460834f2ae3a32ee81a9b9dbc0be5 657 Gene3D G3DSA:3.30.30.80 20 75 5.2E-15 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily JO41_07135 4fd460834f2ae3a32ee81a9b9dbc0be5 657 SMART SM01245 25 76 7.1E-14 T 14-10-2018 IPR032782 Jag, N-terminal JO41_07265 570f1f061a75138b1f9635e900ec9573 3083 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2782 2882 4.7E-19 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 JO41_07265 570f1f061a75138b1f9635e900ec9573 3083 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 53 124 3.8E-11 T 14-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 JO41_07265 570f1f061a75138b1f9635e900ec9573 3083 SUPERFAMILY SSF69318 1355 1709 2.27E-12 T 14-10-2018 JO41_07265 570f1f061a75138b1f9635e900ec9573 3083 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 1675 1819 6.2E-37 T 14-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal JO41_05805 8eb3f4e2ad351a0f36f110085135ac78 237 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 216 9.9E-37 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JO41_05805 8eb3f4e2ad351a0f36f110085135ac78 237 Hamap MF_02088 Probable queuosine precursor transporter. 14 222 17.609 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JO41_05805 8eb3f4e2ad351a0f36f110085135ac78 237 Pfam PF02592 Putative vitamin uptake transporter 51 210 1.1E-49 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JO41_01100 eaa0a028278e34cc6dd1194fa63ccbc3 139 Pfam PF02082 Transcriptional regulator 1 82 5.8E-21 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type JO41_01100 eaa0a028278e34cc6dd1194fa63ccbc3 139 SUPERFAMILY SSF46785 6 135 1.03E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_01100 eaa0a028278e34cc6dd1194fa63ccbc3 139 Gene3D G3DSA:1.10.10.10 1 139 1.6E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_12325 bdadda80de1a8d3e3c95495e416ee389 256 SUPERFAMILY SSF48371 77 186 1.58E-6 T 14-10-2018 IPR016024 Armadillo-type fold JO41_01160 32b493fca181fc755e927e11a58eeae9 93 Pfam PF04999 Cell division protein FtsL 4 85 7.8E-8 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 JO41_00665 afdce6a17e4c2f3d992625b003622ee6 343 Gene3D G3DSA:3.40.190.170 16 342 7.7E-67 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JO41_00665 afdce6a17e4c2f3d992625b003622ee6 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 312 3.9E-49 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JO41_02920 460287a6eff5152a178be6cae3f112d8 89 Pfam PF11823 Protein of unknown function (DUF3343) 7 72 1.6E-22 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 JO41_06680 9c865af561bada68cc5e95ee63100005 270 Gene3D G3DSA:2.180.10.10 1 90 1.4E-8 T 14-10-2018 JO41_10245 de48d062675d6f7cd6ecf1ebbc56fcdc 604 Pfam PF16949 Putative ATP-binding cassette 92 550 1.2E-9 T 14-10-2018 IPR031599 Putative ATP-binding cassette JO41_09615 a0d4fd3b6acecd3b44a0b3e28125dad9 182 Gene3D G3DSA:3.90.870.10 1 182 1.8E-44 T 14-10-2018 JO41_09615 a0d4fd3b6acecd3b44a0b3e28125dad9 182 SUPERFAMILY SSF55821 11 180 3.66E-38 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JO41_09615 a0d4fd3b6acecd3b44a0b3e28125dad9 182 Pfam PF01300 Telomere recombination 18 177 1.1E-31 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 PIRSF PIRSF000105 1 279 8.2E-85 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 SUPERFAMILY SSF51735 1 178 1.44E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 181 277 2.8E-35 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 178 202 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 Gene3D G3DSA:3.40.50.720 1 179 7.6E-61 T 14-10-2018 JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 SUPERFAMILY SSF48179 180 279 7.82E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 178 1.2E-57 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JO41_02445 d7145d04769ea0656a55ef9601ab78f4 279 Gene3D G3DSA:1.10.1040.10 188 273 4.7E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JO41_11395 384c0db3dda48d7ea1b489a1716282b9 305 Pfam PF12804 MobA-like NTP transferase domain 6 138 4.2E-6 T 14-10-2018 IPR025877 MobA-like NTP transferase JO41_11395 384c0db3dda48d7ea1b489a1716282b9 305 SUPERFAMILY SSF53448 3 287 4.06E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_11395 384c0db3dda48d7ea1b489a1716282b9 305 Gene3D G3DSA:3.90.550.10 1 304 1.3E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_02315 d2bcca060ad14c118b1130ff6268dad2 56 Pfam PF13187 4Fe-4S dicluster domain 8 53 9.6E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JO41_02315 d2bcca060ad14c118b1130ff6268dad2 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JO41_02315 d2bcca060ad14c118b1130ff6268dad2 56 SUPERFAMILY SSF54862 1 55 1.74E-18 T 14-10-2018 JO41_02315 d2bcca060ad14c118b1130ff6268dad2 56 Gene3D G3DSA:3.30.70.20 2 56 1.1E-19 T 14-10-2018 JO41_01485 49f909f70e7db0e8b03aba8a92fe0a4c 175 Gene3D G3DSA:2.160.20.100 2 174 1.1E-22 T 14-10-2018 JO41_01485 49f909f70e7db0e8b03aba8a92fe0a4c 175 SUPERFAMILY SSF141571 8 164 9.81E-25 T 14-10-2018 JO41_01485 49f909f70e7db0e8b03aba8a92fe0a4c 175 Pfam PF00805 Pentapeptide repeats (8 copies) 22 60 2.5E-5 T 14-10-2018 IPR001646 Pentapeptide repeat JO41_01485 49f909f70e7db0e8b03aba8a92fe0a4c 175 Pfam PF13599 Pentapeptide repeats (9 copies) 109 173 4.9E-8 T 14-10-2018 IPR001646 Pentapeptide repeat JO41_00610 65ffb4062a92b0b7a77168ae63c3b75d 226 SUPERFAMILY SSF46894 148 221 8.5E-5 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JO41_00610 65ffb4062a92b0b7a77168ae63c3b75d 226 Gene3D G3DSA:1.10.10.10 129 221 6.6E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_00610 65ffb4062a92b0b7a77168ae63c3b75d 226 SUPERFAMILY SSF52172 1 123 8.42E-5 T 14-10-2018 IPR011006 CheY-like superfamily JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 Gene3D G3DSA:1.10.10.60 213 262 2.4E-10 T 14-10-2018 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 SUPERFAMILY SSF46689 216 264 1.43E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 SMART SM00342 230 313 1.5E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 SUPERFAMILY SSF46689 267 314 4.93E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 309 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 Pfam PF12833 Helix-turn-helix domain 236 314 1.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 297 2.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 313 2.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JO41_10360 4a40bbc0570c61ee5275600285d047f4 315 Gene3D G3DSA:1.10.10.60 263 315 2.7E-18 T 14-10-2018 JO41_00110 2a7a2a429ed86da9f6abc411b605c82b 408 Gene3D G3DSA:2.60.40.10 132 224 2.6E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_05695 a4e4646d9e942cde904a3e6691021fcd 501 PIRSF PIRSF000130 2 500 9.6E-137 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JO41_05695 a4e4646d9e942cde904a3e6691021fcd 501 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 489 1.3E-111 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 JO41_05695 a4e4646d9e942cde904a3e6691021fcd 501 Gene3D G3DSA:3.20.20.70 4 499 3.4E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_05695 a4e4646d9e942cde904a3e6691021fcd 501 SUPERFAMILY SSF51412 4 493 3.53E-100 T 14-10-2018 JO41_05695 a4e4646d9e942cde904a3e6691021fcd 501 SUPERFAMILY SSF54631 110 214 7.43E-20 T 14-10-2018 JO41_05695 a4e4646d9e942cde904a3e6691021fcd 501 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 309 321 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 JO41_05695 a4e4646d9e942cde904a3e6691021fcd 501 SMART SM01240 8 489 1.4E-178 T 14-10-2018 JO41_11445 3b6afcd7bd7cfc38aba0902e052c7737 383 Gene3D G3DSA:3.40.630.30 141 344 8.4E-66 T 14-10-2018 JO41_11445 3b6afcd7bd7cfc38aba0902e052c7737 383 SUPERFAMILY SSF55729 3 167 1.54E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_11445 3b6afcd7bd7cfc38aba0902e052c7737 383 Pfam PF02388 FemAB family 258 362 3.1E-37 T 14-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 JO41_11445 3b6afcd7bd7cfc38aba0902e052c7737 383 Pfam PF02388 FemAB family 5 236 1.2E-27 T 14-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 JO41_11445 3b6afcd7bd7cfc38aba0902e052c7737 383 SUPERFAMILY SSF55729 169 358 2.75E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_11445 3b6afcd7bd7cfc38aba0902e052c7737 383 Gene3D G3DSA:3.40.630.30 1 93 2.2E-5 T 14-10-2018 JO41_01050 47b0a190eb8651e3e17a3c1e36878f80 518 Gene3D G3DSA:3.30.420.40 254 516 4.3E-65 T 14-10-2018 JO41_01050 47b0a190eb8651e3e17a3c1e36878f80 518 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 266 457 3.9E-28 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JO41_01050 47b0a190eb8651e3e17a3c1e36878f80 518 SUPERFAMILY SSF53067 261 500 3.74E-53 T 14-10-2018 JO41_01050 47b0a190eb8651e3e17a3c1e36878f80 518 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 256 3.2E-39 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JO41_01050 47b0a190eb8651e3e17a3c1e36878f80 518 PIRSF PIRSF000538 6 512 7.4E-116 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JO41_01050 47b0a190eb8651e3e17a3c1e36878f80 518 Gene3D G3DSA:3.30.420.40 5 253 8.5E-58 T 14-10-2018 JO41_01050 47b0a190eb8651e3e17a3c1e36878f80 518 SUPERFAMILY SSF53067 9 259 1.57E-51 T 14-10-2018 JO41_04755 754b24b70f3726cf2f4e6676de74a17e 141 Pfam PF00258 Flavodoxin 6 133 5.2E-16 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JO41_04755 754b24b70f3726cf2f4e6676de74a17e 141 SUPERFAMILY SSF52218 3 141 1.83E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_04755 754b24b70f3726cf2f4e6676de74a17e 141 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JO41_04755 754b24b70f3726cf2f4e6676de74a17e 141 TIGRFAM TIGR01753 flav_short: flavodoxin 4 140 3.7E-49 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 JO41_04755 754b24b70f3726cf2f4e6676de74a17e 141 Gene3D G3DSA:3.40.50.360 4 141 1.3E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 41 768 7.6E-184 T 14-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 SUPERFAMILY SSF53955 42 261 5.91E-59 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 Pfam PF00912 Transglycosylase 70 228 8.9E-45 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 Pfam PF00905 Penicillin binding protein transpeptidase domain 307 434 5.5E-10 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 Gene3D G3DSA:1.10.3810.10 61 252 1.7E-51 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 SUPERFAMILY SSF56601 210 605 6.07E-73 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 Gene3D G3DSA:3.40.710.10 255 604 1.4E-60 T 14-10-2018 JO41_12245 79a7470cb78aba6892b3c4c6ef8c75f9 773 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 680 762 3.3E-13 T 14-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_04180 54b472537210ae0b619f088450110f9e 339 PIRSF PIRSF019574 2 338 1.4E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 SUPERFAMILY SSF53850 21 295 6.34E-62 T 14-10-2018 JO41_04180 54b472537210ae0b619f088450110f9e 339 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 68 82 3.7E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 116 132 3.7E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 62 3.7E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 197 216 3.7E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 159 178 3.7E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 97 3.7E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 25 41 3.7E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JO41_04180 54b472537210ae0b619f088450110f9e 339 Gene3D G3DSA:3.40.190.10 126 332 6.0E-111 T 14-10-2018 JO41_04180 54b472537210ae0b619f088450110f9e 339 Pfam PF13416 Bacterial extracellular solute-binding protein 36 295 9.0E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_04180 54b472537210ae0b619f088450110f9e 339 Gene3D G3DSA:3.40.190.10 23 303 6.0E-111 T 14-10-2018 JO41_09170 04722de4e437acf2405f6e8312546f65 284 Gene3D G3DSA:1.10.3720.10 83 283 4.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily JO41_09170 04722de4e437acf2405f6e8312546f65 284 SUPERFAMILY SSF161098 88 278 1.5E-21 T 14-10-2018 IPR035906 MetI-like superfamily JO41_09170 04722de4e437acf2405f6e8312546f65 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 272 1.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_02450 b1aaf9ec205a0c74097315c8bd060f80 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_02450 b1aaf9ec205a0c74097315c8bd060f80 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_02450 b1aaf9ec205a0c74097315c8bd060f80 198 SUPERFAMILY SSF46689 6 77 1.9E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_02450 b1aaf9ec205a0c74097315c8bd060f80 198 Gene3D G3DSA:1.10.357.10 3 193 7.6E-18 T 14-10-2018 JO41_02450 b1aaf9ec205a0c74097315c8bd060f80 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 3.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_12330 92c6c3e0c3ffd72ec91a9a16e19ee052 69 SUPERFAMILY SSF103032 1 62 1.44E-7 T 14-10-2018 IPR035948 YwqG-like superfamily JO41_12330 92c6c3e0c3ffd72ec91a9a16e19ee052 69 Gene3D G3DSA:2.30.320.10 1 68 2.7E-10 T 14-10-2018 IPR035948 YwqG-like superfamily JO41_06385 ec1c7fef2811c3c2e053e948e42c05cf 357 Pfam PF10974 Protein of unknown function (DUF2804) 29 356 7.4E-40 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 JO41_09365 faa98e82ffde880f98bbe989dd9e0bd2 498 Pfam PF00135 Carboxylesterase family 3 449 3.6E-59 T 14-10-2018 IPR002018 Carboxylesterase, type B JO41_09365 faa98e82ffde880f98bbe989dd9e0bd2 498 SUPERFAMILY SSF53474 3 446 1.64E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_09365 faa98e82ffde880f98bbe989dd9e0bd2 498 Gene3D G3DSA:3.40.50.1820 2 482 5.1E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_10310 a12940b4b4f79fa5daf185a8d67d7a53 220 Gene3D G3DSA:3.40.50.410 26 200 4.5E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_10310 a12940b4b4f79fa5daf185a8d67d7a53 220 Pfam PF13519 von Willebrand factor type A domain 32 139 8.7E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_10310 a12940b4b4f79fa5daf185a8d67d7a53 220 SMART SM00327 28 211 2.6E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_10310 a12940b4b4f79fa5daf185a8d67d7a53 220 SUPERFAMILY SSF53300 28 146 8.51E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_09295 9260db2eab21a9211ab5bbe845921b96 366 SMART SM00244 129 288 5.3E-18 T 14-10-2018 IPR001107 Band 7 domain JO41_09295 9260db2eab21a9211ab5bbe845921b96 366 Pfam PF01145 SPFH domain / Band 7 family 135 304 7.0E-19 T 14-10-2018 IPR001107 Band 7 domain JO41_09295 9260db2eab21a9211ab5bbe845921b96 366 Gene3D G3DSA:3.30.479.30 164 290 1.1E-24 T 14-10-2018 JO41_09295 9260db2eab21a9211ab5bbe845921b96 366 SUPERFAMILY SSF117892 168 294 3.66E-26 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JO41_03315 9d384d88f91f9ce4c713fc43f8086d8a 311 Pfam PF12872 OST-HTH/LOTUS domain 160 218 5.2E-12 T 14-10-2018 IPR025605 OST-HTH/LOTUS domain JO41_03315 9d384d88f91f9ce4c713fc43f8086d8a 311 Gene3D G3DSA:2.40.50.140 239 310 1.2E-7 T 14-10-2018 JO41_03315 9d384d88f91f9ce4c713fc43f8086d8a 311 Pfam PF01936 NYN domain 6 136 6.7E-24 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type JO41_03315 9d384d88f91f9ce4c713fc43f8086d8a 311 Gene3D G3DSA:1.10.10.1880 160 229 3.3E-11 T 14-10-2018 JO41_03315 9d384d88f91f9ce4c713fc43f8086d8a 311 Gene3D G3DSA:3.40.50.1010 1 140 2.0E-9 T 14-10-2018 JO41_03315 9d384d88f91f9ce4c713fc43f8086d8a 311 SUPERFAMILY SSF50249 238 293 5.63E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JO41_03750 128ab16d8874bdeec133e99f88bc7428 154 Pfam PF13151 Protein of unknown function (DUF3990) 1 144 4.2E-47 T 14-10-2018 IPR025051 Protein of unknown function DUF3990 JO41_03090 5eb4effa1a444df0361878e63cf7e503 323 SUPERFAMILY SSF53448 5 222 5.72E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_03090 5eb4effa1a444df0361878e63cf7e503 323 Pfam PF00535 Glycosyl transferase family 2 7 102 6.7E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JO41_03090 5eb4effa1a444df0361878e63cf7e503 323 Gene3D G3DSA:3.90.550.10 1 265 8.0E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JO41_12135 45470fccb18133a12c2c168aaf050e6d 294 Gene3D G3DSA:3.10.310.50 55 208 1.6E-20 T 14-10-2018 JO41_12135 45470fccb18133a12c2c168aaf050e6d 294 Pfam PF04536 TPM domain 64 193 4.5E-24 T 14-10-2018 IPR007621 TPM domain JO41_06245 3ea7483423c6062a684f982163b30f01 235 PIRSF PIRSF004976 3 234 8.4E-48 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 JO41_06245 3ea7483423c6062a684f982163b30f01 235 Gene3D G3DSA:3.40.50.620 3 234 1.6E-34 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JO41_06245 3ea7483423c6062a684f982163b30f01 235 Pfam PF01171 PP-loop family 26 170 2.2E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JO41_06245 3ea7483423c6062a684f982163b30f01 235 SUPERFAMILY SSF52402 4 209 1.23E-35 T 14-10-2018 JO41_06310 4f2dea5bb7f82d05ce83fd52bb9d2917 220 Gene3D G3DSA:1.10.3720.10 5 219 4.3E-48 T 14-10-2018 IPR035906 MetI-like superfamily JO41_06310 4f2dea5bb7f82d05ce83fd52bb9d2917 220 SUPERFAMILY SSF161098 12 203 2.62E-44 T 14-10-2018 IPR035906 MetI-like superfamily JO41_06310 4f2dea5bb7f82d05ce83fd52bb9d2917 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 219 3.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_10040 54073145ed2686918656b45c3932c91c 344 Gene3D G3DSA:3.50.30.60 162 344 1.1E-51 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily JO41_10040 54073145ed2686918656b45c3932c91c 344 Pfam PF02016 LD-carboxypeptidase 6 334 2.9E-59 T 14-10-2018 IPR003507 Peptidase family S66 JO41_10040 54073145ed2686918656b45c3932c91c 344 PIRSF PIRSF028757 1 344 5.6E-49 T 14-10-2018 IPR003507 Peptidase family S66 JO41_10040 54073145ed2686918656b45c3932c91c 344 SUPERFAMILY SSF52317 5 169 2.93E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_10040 54073145ed2686918656b45c3932c91c 344 SUPERFAMILY SSF141986 192 340 1.44E-18 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily JO41_10040 54073145ed2686918656b45c3932c91c 344 Gene3D G3DSA:3.40.50.10740 1 161 2.9E-52 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal JO41_02760 30277d219e239f94f73afc096b9be034 221 Pfam PF00814 Glycoprotease family 34 197 6.1E-19 T 14-10-2018 IPR000905 Gcp-like domain JO41_02760 30277d219e239f94f73afc096b9be034 221 Gene3D G3DSA:3.30.420.40 95 184 2.4E-36 T 14-10-2018 JO41_02760 30277d219e239f94f73afc096b9be034 221 Gene3D G3DSA:3.30.420.40 3 216 2.4E-36 T 14-10-2018 JO41_02760 30277d219e239f94f73afc096b9be034 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 214 1.1E-36 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 JO41_02760 30277d219e239f94f73afc096b9be034 221 SUPERFAMILY SSF53067 1 100 1.52E-18 T 14-10-2018 JO41_07810 3ce07a8678d04601dad32fabb2942c54 70 Gene3D G3DSA:3.40.50.720 9 18 1.7E-6 T 14-10-2018 JO41_07810 3ce07a8678d04601dad32fabb2942c54 70 Pfam PF13602 Zinc-binding dehydrogenase 14 68 7.3E-8 T 14-10-2018 JO41_07810 3ce07a8678d04601dad32fabb2942c54 70 Gene3D G3DSA:3.90.180.10 20 68 1.7E-6 T 14-10-2018 JO41_11665 cdcc8263e234af79a5770b8f8d26dc66 359 Gene3D G3DSA:1.10.10.10 266 358 8.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_11665 cdcc8263e234af79a5770b8f8d26dc66 359 Pfam PF01022 Bacterial regulatory protein, arsR family 286 330 2.4E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JO41_11665 cdcc8263e234af79a5770b8f8d26dc66 359 SUPERFAMILY SSF46785 275 345 1.48E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_06990 2d2c3022d09b1f86fae0fa295ad763a0 390 Gene3D G3DSA:1.10.3210.10 3 316 2.7E-49 T 14-10-2018 JO41_06990 2d2c3022d09b1f86fae0fa295ad763a0 390 Pfam PF13487 HD domain 205 266 2.4E-13 T 14-10-2018 JO41_06990 2d2c3022d09b1f86fae0fa295ad763a0 390 SUPERFAMILY SSF109604 147 312 7.71E-18 T 14-10-2018 JO41_06990 2d2c3022d09b1f86fae0fa295ad763a0 390 SMART SM00471 149 284 2.2E-4 T 14-10-2018 IPR003607 HD/PDEase domain JO41_00170 4f77c82e4232e4a8183ea7344b3e7ed6 68 SUPERFAMILY SSF63562 5 63 5.93E-8 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JO41_00170 4f77c82e4232e4a8183ea7344b3e7ed6 68 Pfam PF01192 RNA polymerase Rpb6 8 57 3.3E-5 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JO41_01370 81186a6534424311f23769d4d892de2b 177 PIRSF PIRSF004553 1 177 1.0E-54 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JO41_01370 81186a6534424311f23769d4d892de2b 177 SUPERFAMILY SSF53335 1 173 1.6E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_01370 81186a6534424311f23769d4d892de2b 177 Pfam PF03602 Conserved hypothetical protein 95 1 174 6.0E-40 T 14-10-2018 JO41_01370 81186a6534424311f23769d4d892de2b 177 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 175 4.4E-36 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JO41_01370 81186a6534424311f23769d4d892de2b 177 Gene3D G3DSA:3.40.50.150 1 177 6.4E-44 T 14-10-2018 JO41_01370 81186a6534424311f23769d4d892de2b 177 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 110 116 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_11465 9aa4a0af5319e448d389a35f74073d60 510 Pfam PF02687 FtsX-like permease family 402 504 3.6E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_00010 e66346ba3068af27a8297c31a60106de 124 SUPERFAMILY SSF54001 5 110 4.9E-9 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO41_00010 e66346ba3068af27a8297c31a60106de 124 Gene3D G3DSA:3.90.1720.10 2 118 8.9E-10 T 14-10-2018 JO41_00010 e66346ba3068af27a8297c31a60106de 124 Pfam PF00877 NlpC/P60 family 11 107 6.2E-6 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SMART SM00028 95 128 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SMART SM00028 163 196 0.0022 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SMART SM00028 129 162 2.5E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SMART SM00028 56 89 500.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SMART SM00028 231 264 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SMART SM00028 269 302 59.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SUPERFAMILY SSF48452 47 222 2.87E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 Pfam PF13432 Tetratricopeptide repeat 170 219 2.0E-6 T 14-10-2018 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 Pfam PF04471 Restriction endonuclease 376 439 1.0E-8 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 Gene3D G3DSA:1.25.40.10 225 321 9.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 Pfam PF00515 Tetratricopeptide repeat 133 162 6.7E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 SUPERFAMILY SSF48452 189 308 1.17E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 Gene3D G3DSA:1.25.40.10 27 136 1.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03645 13bf3148a182db1cd475e36aa9008e72 444 Gene3D G3DSA:1.25.40.10 137 224 1.1E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03885 ce0ebb540fbdcfad2fe4cb44595b966a 112 SUPERFAMILY SSF102829 9 80 3.66E-6 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily JO41_03885 ce0ebb540fbdcfad2fe4cb44595b966a 112 Pfam PF05164 Cell division protein ZapA 9 87 3.0E-8 T 14-10-2018 IPR007838 Cell division protein ZapA-like JO41_01110 39230e46ced979451ffefa42f34e054a 162 Gene3D G3DSA:3.30.70.560 1 161 3.5E-43 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JO41_01110 39230e46ced979451ffefa42f34e054a 162 SUPERFAMILY SSF55083 1 158 7.85E-44 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JO41_01110 39230e46ced979451ffefa42f34e054a 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 135 9.9E-33 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JO41_01110 39230e46ced979451ffefa42f34e054a 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 135 1.4E-31 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JO41_06825 94e599f86fdb2bdbc45f45f132d90d13 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 129 28.759 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid JO41_06825 94e599f86fdb2bdbc45f45f132d90d13 129 SUPERFAMILY SSF54211 6 129 1.02E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JO41_06825 94e599f86fdb2bdbc45f45f132d90d13 129 Gene3D G3DSA:3.30.230.10 2 129 3.5E-47 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JO41_06825 94e599f86fdb2bdbc45f45f132d90d13 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 2.4E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 JO41_06825 94e599f86fdb2bdbc45f45f132d90d13 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 JO41_12665 761c7d082ea2edb7dc046e7a9f151b86 284 SUPERFAMILY SSF51717 11 280 2.75E-89 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO41_12665 761c7d082ea2edb7dc046e7a9f151b86 284 Gene3D G3DSA:3.20.20.20 5 282 4.4E-98 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO41_12665 761c7d082ea2edb7dc046e7a9f151b86 284 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 276 5.9E-93 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 JO41_12665 761c7d082ea2edb7dc046e7a9f151b86 284 Pfam PF00809 Pterin binding enzyme 22 263 1.1E-76 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JO41_09955 1fcec68d736c047855c62ab476ef4318 312 Gene3D G3DSA:3.40.50.300 104 310 1.3E-73 T 14-10-2018 JO41_09955 1fcec68d736c047855c62ab476ef4318 312 SUPERFAMILY SSF52540 106 262 9.68E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_09955 1fcec68d736c047855c62ab476ef4318 312 Pfam PF02562 PhoH-like protein 107 310 1.3E-84 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 JO41_03145 7d55bc6e468d33e1f48dda1e56cf3e92 372 PIRSF PIRSF000390 5 372 2.2E-95 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_03145 7d55bc6e468d33e1f48dda1e56cf3e92 372 SUPERFAMILY SSF53383 15 371 7.34E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JO41_03145 7d55bc6e468d33e1f48dda1e56cf3e92 372 Gene3D G3DSA:3.90.1150.10 250 372 8.9E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JO41_03145 7d55bc6e468d33e1f48dda1e56cf3e92 372 Gene3D G3DSA:3.40.640.10 1 248 2.5E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JO41_03145 7d55bc6e468d33e1f48dda1e56cf3e92 372 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 366 7.4E-106 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JO41_06215 f6d9bb8d896b15b1e394e3bb09155396 378 Pfam PF07907 YibE/F-like protein 126 364 5.8E-78 T 14-10-2018 IPR012507 YibE/F-like JO41_01255 50f921944d5c229887a184b2facb410e 101 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.7E-18 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JO41_01255 50f921944d5c229887a184b2facb410e 101 SMART SM00834 1 41 2.2E-15 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JO41_01255 50f921944d5c229887a184b2facb410e 101 Pfam PF09723 Zinc ribbon domain 1 39 3.0E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JO41_08825 5b23f83b52e57e52b2961f9eba25f4c1 340 Pfam PF01699 Sodium/calcium exchanger protein 17 164 7.0E-28 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 JO41_08825 5b23f83b52e57e52b2961f9eba25f4c1 340 Pfam PF01699 Sodium/calcium exchanger protein 189 333 2.8E-26 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 JO41_08825 5b23f83b52e57e52b2961f9eba25f4c1 340 Gene3D G3DSA:1.20.58.1130 22 221 3.9E-74 T 14-10-2018 JO41_08825 5b23f83b52e57e52b2961f9eba25f4c1 340 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 16 328 3.1E-57 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 JO41_08825 5b23f83b52e57e52b2961f9eba25f4c1 340 Gene3D G3DSA:1.20.1420.30 48 325 3.9E-74 T 14-10-2018 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 Gene3D G3DSA:1.25.40.10 263 487 1.9E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SMART SM00028 162 195 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SMART SM00028 264 297 0.32 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SMART SM00028 128 161 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SMART SM00028 196 229 5.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SMART SM00028 332 365 0.31 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SMART SM00028 230 263 1.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SMART SM00028 298 331 0.43 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 Pfam PF13432 Tetratricopeptide repeat 236 297 1.7E-5 T 14-10-2018 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 Pfam PF13432 Tetratricopeptide repeat 310 359 6.7E-4 T 14-10-2018 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 Pfam PF14559 Tetratricopeptide repeat 70 129 1.2E-6 T 14-10-2018 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 Gene3D G3DSA:1.25.40.10 24 262 5.3E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_06050 6eddb5c7f329600b6bd15f062fd97352 488 SUPERFAMILY SSF48452 68 395 8.63E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_00155 e617993fb81b0b900ba6b93dbe447353 299 Pfam PF13277 YmdB-like protein 5 286 4.3E-59 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like JO41_00155 e617993fb81b0b900ba6b93dbe447353 299 SUPERFAMILY SSF56300 1 287 2.15E-36 T 14-10-2018 JO41_12505 64298b254a7417ba944c96b0e08c4b25 450 Pfam PF12704 MacB-like periplasmic core domain 32 249 7.2E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_12505 64298b254a7417ba944c96b0e08c4b25 450 Pfam PF02687 FtsX-like permease family 318 441 3.5E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_06315 a77c5c41a63657eda1edbd0ee5920147 294 SUPERFAMILY SSF51569 36 276 1.25E-58 T 14-10-2018 JO41_06315 a77c5c41a63657eda1edbd0ee5920147 294 SMART SM01133 52 260 1.2E-21 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO41_06315 a77c5c41a63657eda1edbd0ee5920147 294 Pfam PF01791 DeoC/LacD family aldolase 97 259 9.9E-14 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO41_06315 a77c5c41a63657eda1edbd0ee5920147 294 PIRSF PIRSF038992 32 290 1.7E-63 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JO41_06315 a77c5c41a63657eda1edbd0ee5920147 294 Gene3D G3DSA:3.20.20.70 1 292 6.8E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_04020 6ed85cfba2a85061d668c42f700736bb 161 Pfam PF02681 Divergent PAP2 family 13 151 4.9E-42 T 14-10-2018 IPR003832 Protein of unknown function DUF212 JO41_02770 b6fdbaaf6e79e5256cfdb19fb9e3c76f 275 Pfam PF00849 RNA pseudouridylate synthase 36 179 9.8E-21 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_02770 b6fdbaaf6e79e5256cfdb19fb9e3c76f 275 Gene3D G3DSA:3.30.2350.10 2 225 9.3E-42 T 14-10-2018 JO41_02770 b6fdbaaf6e79e5256cfdb19fb9e3c76f 275 SUPERFAMILY SSF55120 6 227 1.03E-39 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_02770 b6fdbaaf6e79e5256cfdb19fb9e3c76f 275 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 43 57 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_08390 a23c5cd9191057bfe6b0e3905b10b830 114 Gene3D G3DSA:3.40.1350.10 7 112 3.0E-8 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JO41_06250 9b67fcc843b8cd7111dd57101aef1b86 174 Gene3D G3DSA:3.30.70.1280 1 87 5.9E-28 T 14-10-2018 JO41_06250 9b67fcc843b8cd7111dd57101aef1b86 174 SUPERFAMILY SSF160379 1 172 1.83E-42 T 14-10-2018 JO41_06250 9b67fcc843b8cd7111dd57101aef1b86 174 Gene3D G3DSA:3.30.70.1260 88 174 8.7E-9 T 14-10-2018 JO41_06250 9b67fcc843b8cd7111dd57101aef1b86 174 PIRSF PIRSF008502 1 174 1.2E-44 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 JO41_06250 9b67fcc843b8cd7111dd57101aef1b86 174 Pfam PF08002 Protein of unknown function (DUF1697) 2 133 8.1E-36 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 JO41_09895 ab0a5d690841cfaf63e566d4a6024ba5 585 Gene3D G3DSA:1.20.5.680 1 59 9.3E-23 T 14-10-2018 JO41_09895 ab0a5d690841cfaf63e566d4a6024ba5 585 SUPERFAMILY SSF52096 295 581 5.57E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_09895 ab0a5d690841cfaf63e566d4a6024ba5 585 Gene3D G3DSA:3.90.226.10 60 287 1.7E-47 T 14-10-2018 JO41_09895 ab0a5d690841cfaf63e566d4a6024ba5 585 Gene3D G3DSA:3.90.226.10 288 584 6.9E-78 T 14-10-2018 JO41_09895 ab0a5d690841cfaf63e566d4a6024ba5 585 SUPERFAMILY SSF52096 41 237 7.57E-36 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_09895 ab0a5d690841cfaf63e566d4a6024ba5 585 Pfam PF01039 Carboxyl transferase domain 56 570 1.2E-117 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JO41_06740 162d948dc1f026d687a0f5c6019a2731 337 Pfam PF03116 NQR2, RnfD, RnfE family 12 322 1.1E-107 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 JO41_06740 162d948dc1f026d687a0f5c6019a2731 337 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 9 326 23.149 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 JO41_06740 162d948dc1f026d687a0f5c6019a2731 337 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 14 323 4.4E-88 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 JO41_03420 b496335cbddec12f2c32a59eed109f94 411 Pfam PF02355 Protein export membrane protein 210 388 1.3E-59 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JO41_03420 b496335cbddec12f2c32a59eed109f94 411 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 195 378 9.9E-55 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03420 b496335cbddec12f2c32a59eed109f94 411 Gene3D G3DSA:1.20.1640.10 187 396 1.2E-9 T 14-10-2018 JO41_03420 b496335cbddec12f2c32a59eed109f94 411 SUPERFAMILY SSF82866 56 392 3.92E-41 T 14-10-2018 JO41_03420 b496335cbddec12f2c32a59eed109f94 411 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 151 381 7.8E-75 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JO41_03420 b496335cbddec12f2c32a59eed109f94 411 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 6.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03420 b496335cbddec12f2c32a59eed109f94 411 PRINTS PR01755 Bacterial translocase SecF protein signature 249 263 6.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03420 b496335cbddec12f2c32a59eed109f94 411 PRINTS PR01755 Bacterial translocase SecF protein signature 297 315 6.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03420 b496335cbddec12f2c32a59eed109f94 411 PRINTS PR01755 Bacterial translocase SecF protein signature 329 344 6.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JO41_03420 b496335cbddec12f2c32a59eed109f94 411 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 392 27.743 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JO41_04440 04afce6f327838fe583d7e20770b4019 246 Pfam PF07650 KH domain 48 112 2.2E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04440 04afce6f327838fe583d7e20770b4019 246 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 211 1.2E-92 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JO41_04440 04afce6f327838fe583d7e20770b4019 246 SUPERFAMILY SSF54821 110 206 1.31E-34 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04440 04afce6f327838fe583d7e20770b4019 246 Gene3D G3DSA:3.30.1140.32 110 209 5.0E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04440 04afce6f327838fe583d7e20770b4019 246 Pfam PF00189 Ribosomal protein S3, C-terminal domain 122 204 1.3E-35 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04440 04afce6f327838fe583d7e20770b4019 246 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 208 36.751 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JO41_04440 04afce6f327838fe583d7e20770b4019 246 SUPERFAMILY SSF54814 2 108 1.57E-34 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JO41_04440 04afce6f327838fe583d7e20770b4019 246 Gene3D G3DSA:3.30.300.20 17 109 1.4E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JO41_04440 04afce6f327838fe583d7e20770b4019 246 ProSitePatterns PS00548 Ribosomal protein S3 signature. 165 199 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JO41_04440 04afce6f327838fe583d7e20770b4019 246 SMART SM00322 62 127 3.6E-4 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JO41_05965 8a6ff93ecac9e9697b410141fbc2f87f 79 Pfam PF04024 PspC domain 3 58 2.6E-23 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal JO41_04005 0f95fc2d348b2220dac8dcd69876c237 340 Pfam PF03116 NQR2, RnfD, RnfE family 9 327 1.3E-33 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 JO41_01725 350f5aaa25a5c8e89dbab812de362754 835 SUPERFAMILY SSF63829 511 694 1.05E-5 T 14-10-2018 JO41_09785 60f0dc4fd4efd0a1cb96dd752bc008b3 346 Pfam PF07907 YibE/F-like protein 101 338 2.9E-83 T 14-10-2018 IPR012507 YibE/F-like JO41_08875 44ff930382b80158532bf1105212be54 271 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 192 263 1.1E-18 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JO41_08875 44ff930382b80158532bf1105212be54 271 SUPERFAMILY SSF117143 100 228 3.92E-23 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JO41_08875 44ff930382b80158532bf1105212be54 271 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 247 4.2E-54 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 JO41_08875 44ff930382b80158532bf1105212be54 271 Pfam PF00460 Flagella basal body rod protein 6 35 3.0E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JO41_08875 44ff930382b80158532bf1105212be54 271 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 141 6.4E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JO41_10850 939298adb36643b25fda9a39a2cd2a01 329 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 158 170 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JO41_10850 939298adb36643b25fda9a39a2cd2a01 329 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 22 315 1.7E-58 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JO41_10850 939298adb36643b25fda9a39a2cd2a01 329 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 323 17.782 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JO41_10850 939298adb36643b25fda9a39a2cd2a01 329 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 316 5.8E-65 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JO41_02975 cdb07e5bc10c3c0d39b9751d377cd4d4 225 Pfam PF02517 CAAX protease self-immunity 122 208 2.5E-19 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO41_11095 2e97174387250648d5a681616f60770b 296 Gene3D G3DSA:2.160.20.10 21 214 1.2E-6 T 14-10-2018 IPR012334 Pectin lyase fold JO41_11095 2e97174387250648d5a681616f60770b 296 SUPERFAMILY SSF51126 15 183 1.33E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JO41_10770 c10517a1d576a80a44190b879311798d 143 Pfam PF13673 Acetyltransferase (GNAT) domain 26 135 1.3E-13 T 14-10-2018 IPR000182 GNAT domain JO41_10770 c10517a1d576a80a44190b879311798d 143 SUPERFAMILY SSF55729 1 139 6.69E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JO41_10770 c10517a1d576a80a44190b879311798d 143 Gene3D G3DSA:3.40.630.30 1 142 1.7E-28 T 14-10-2018 JO41_10180 7912633acab17c9b939ff958634b48d7 118 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 115 1.0E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 JO41_10180 7912633acab17c9b939ff958634b48d7 118 SUPERFAMILY SSF57716 82 117 2.71E-9 T 14-10-2018 JO41_10180 7912633acab17c9b939ff958634b48d7 118 Gene3D G3DSA:1.20.120.910 1 118 3.4E-28 T 14-10-2018 JO41_10180 7912633acab17c9b939ff958634b48d7 118 SUPERFAMILY SSF109635 1 80 9.42E-9 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily JO41_01875 290a046a71410366990066ea5fd1e473 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 17.574 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01875 290a046a71410366990066ea5fd1e473 63 Gene3D G3DSA:2.30.170.40 2 63 6.8E-18 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01875 290a046a71410366990066ea5fd1e473 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 1.2E-23 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JO41_01875 290a046a71410366990066ea5fd1e473 63 Pfam PF00830 Ribosomal L28 family 3 56 3.6E-21 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_01875 290a046a71410366990066ea5fd1e473 63 SUPERFAMILY SSF143800 1 61 6.47E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JO41_11800 af6d65f414c03abf1028209faef3f712 444 PIRSF PIRSF006603 2 441 2.4E-100 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_11800 af6d65f414c03abf1028209faef3f712 444 Pfam PF01554 MatE 241 401 7.3E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_11800 af6d65f414c03abf1028209faef3f712 444 Pfam PF01554 MatE 16 176 9.6E-27 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_11800 af6d65f414c03abf1028209faef3f712 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 412 5.4E-61 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_03825 2ba1cdb2a17815eb5cc719d98776a971 253 SUPERFAMILY SSF53474 20 253 4.36E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_03825 2ba1cdb2a17815eb5cc719d98776a971 253 Pfam PF12697 Alpha/beta hydrolase family 26 243 2.2E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JO41_03825 2ba1cdb2a17815eb5cc719d98776a971 253 Gene3D G3DSA:3.40.50.1820 10 253 1.3E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_03825 2ba1cdb2a17815eb5cc719d98776a971 253 PIRSF PIRSF017388 8 253 6.0E-68 T 14-10-2018 IPR012354 Esterase/lipase GO:0052689 JO41_01520 481b0e1213d19285f15954fcfa4745a1 356 PIRSF PIRSF001361 2 355 1.5E-130 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JO41_01520 481b0e1213d19285f15954fcfa4745a1 356 Gene3D G3DSA:3.20.20.70 7 353 5.4E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_01520 481b0e1213d19285f15954fcfa4745a1 356 Pfam PF00793 DAHP synthetase I family 40 344 4.6E-72 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JO41_01520 481b0e1213d19285f15954fcfa4745a1 356 SUPERFAMILY SSF51569 11 351 1.67E-106 T 14-10-2018 JO41_01520 481b0e1213d19285f15954fcfa4745a1 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 349 4.8E-121 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JO41_11130 406dde35b51d0818c4e5c800be3cb143 397 Gene3D G3DSA:1.10.3210.10 190 390 1.4E-31 T 14-10-2018 JO41_11130 406dde35b51d0818c4e5c800be3cb143 397 Gene3D G3DSA:1.10.3210.10 8 189 4.7E-13 T 14-10-2018 JO41_11130 406dde35b51d0818c4e5c800be3cb143 397 Pfam PF13023 HD domain 195 373 4.3E-31 T 14-10-2018 IPR006674 HD domain JO41_11130 406dde35b51d0818c4e5c800be3cb143 397 SUPERFAMILY SSF109604 182 367 7.68E-29 T 14-10-2018 JO41_05515 cf99bdfa43523dab74af23e8f7d3b98e 370 Gene3D G3DSA:3.30.70.1070 302 369 1.7E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JO41_05515 cf99bdfa43523dab74af23e8f7d3b98e 370 Gene3D G3DSA:1.25.40.10 37 215 1.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05515 cf99bdfa43523dab74af23e8f7d3b98e 370 Pfam PF05036 Sporulation related domain 301 366 2.3E-4 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JO41_04865 184a0aa531adf0151b169aada54449a1 437 SUPERFAMILY SSF52540 47 388 5.66E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04865 184a0aa531adf0151b169aada54449a1 437 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 265 366 2.7E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_04865 184a0aa531adf0151b169aada54449a1 437 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 47 151 4.1E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JO41_04865 184a0aa531adf0151b169aada54449a1 437 Gene3D G3DSA:3.40.50.300 2 166 8.7E-8 T 14-10-2018 JO41_04865 184a0aa531adf0151b169aada54449a1 437 Gene3D G3DSA:3.40.50.300 220 396 2.7E-8 T 14-10-2018 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 Gene3D G3DSA:3.40.50.150 13 250 1.1E-56 T 14-10-2018 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 Pfam PF01555 DNA methylase 32 246 5.1E-48 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 34 40 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 SUPERFAMILY SSF53335 10 250 2.35E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 30 44 5.1E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 188 205 5.1E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 230 250 5.1E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 207 225 5.1E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_08565 83d8cdb694c71db28d109e6893e99d6d 293 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 78 98 5.1E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JO41_05665 249090fc8e0a1810641266f67f5af9b7 86 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 25 84 1.4E-8 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 JO41_01145 90db37776b8a9bcdb8c62ab1e740e633 318 Pfam PF01963 TraB family 47 315 1.8E-43 T 14-10-2018 IPR002816 Pheromone shutdown, TraB JO41_00660 c09718d0c017ea8c771e63d54b7d5fb5 608 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 190 602 4.7E-70 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JO41_00660 c09718d0c017ea8c771e63d54b7d5fb5 608 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 205 606 4.3E-105 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JO41_01560 75fbfce5f9ed120abb17c4c03fb5b38a 414 SUPERFAMILY SSF53850 18 320 5.69E-17 T 14-10-2018 JO41_01560 75fbfce5f9ed120abb17c4c03fb5b38a 414 Pfam PF13416 Bacterial extracellular solute-binding protein 38 318 4.6E-9 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JO41_01560 75fbfce5f9ed120abb17c4c03fb5b38a 414 Gene3D G3DSA:3.40.190.10 26 360 7.6E-22 T 14-10-2018 JO41_11070 0553a8799f51f867c4f04db09285d853 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 216 240 5.2E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 5.2E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 257 274 5.2E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 146 166 5.2E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 186 210 5.2E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 5.2E-30 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 201 221 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 171 5.1E-41 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 Gene3D G3DSA:1.10.1040.10 202 357 5.8E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JO41_11070 0553a8799f51f867c4f04db09285d853 357 PIRSF PIRSF000114 1 357 1.3E-93 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 SUPERFAMILY SSF48179 193 354 1.11E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JO41_11070 0553a8799f51f867c4f04db09285d853 357 SUPERFAMILY SSF51735 4 189 8.79E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_11070 0553a8799f51f867c4f04db09285d853 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 193 348 2.6E-38 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_11070 0553a8799f51f867c4f04db09285d853 357 Gene3D G3DSA:3.40.50.720 1 200 5.6E-46 T 14-10-2018 JO41_11070 0553a8799f51f867c4f04db09285d853 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 350 28.356 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JO41_10490 4ebd6af6b89677c3a98f24dcfea088cd 132 Gene3D G3DSA:3.40.50.1010 1 131 6.5E-35 T 14-10-2018 JO41_10490 4ebd6af6b89677c3a98f24dcfea088cd 132 Pfam PF01850 PIN domain 3 121 3.9E-10 T 14-10-2018 IPR002716 PIN domain JO41_10490 4ebd6af6b89677c3a98f24dcfea088cd 132 SUPERFAMILY SSF88723 1 130 1.46E-34 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_11805 1cc265ce9166d9acffe2111f27bf90a5 621 Gene3D G3DSA:3.30.70.1230 433 621 6.2E-30 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_11805 1cc265ce9166d9acffe2111f27bf90a5 621 SUPERFAMILY SSF55073 443 619 5.97E-31 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_11805 1cc265ce9166d9acffe2111f27bf90a5 621 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 440 613 5.8E-16 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JO41_11805 1cc265ce9166d9acffe2111f27bf90a5 621 Pfam PF07695 7TM diverse intracellular signalling 191 386 2.0E-18 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 Gene3D G3DSA:3.30.420.10 11 164 5.8E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 12 159 2.3E-52 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 SUPERFAMILY SSF53098 11 164 2.47E-44 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_10485 d4e12332063b3dc95267bced2c134d02 166 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 12 163 8.4E-38 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 70 86 5.9E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 148 160 5.9E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 116 135 5.9E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 13 26 5.9E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 92 108 5.9E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_10485 d4e12332063b3dc95267bced2c134d02 166 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 10 163 41.925 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JO41_04615 f4e3f65830ccab3e072948b497e1b675 326 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 171 1.5E-54 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JO41_04615 f4e3f65830ccab3e072948b497e1b675 326 SMART SM00382 34 180 0.0035 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04615 f4e3f65830ccab3e072948b497e1b675 326 SUPERFAMILY SSF52540 6 288 5.32E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04615 f4e3f65830ccab3e072948b497e1b675 326 PIRSF PIRSF002849 1 318 6.0E-108 T 14-10-2018 JO41_04615 f4e3f65830ccab3e072948b497e1b675 326 Gene3D G3DSA:3.40.50.300 18 189 8.8E-39 T 14-10-2018 JO41_04615 f4e3f65830ccab3e072948b497e1b675 326 Gene3D G3DSA:1.10.8.300 205 312 3.2E-16 T 14-10-2018 JO41_11170 6fcee6f8bc19df20553ac4b6ed922c7c 501 Pfam PF04200 Lipoprotein associated domain 282 365 0.62 T 14-10-2018 IPR007326 Lipoprotein-associated domain JO41_11170 6fcee6f8bc19df20553ac4b6ed922c7c 501 Pfam PF04200 Lipoprotein associated domain 68 119 4.5E-6 T 14-10-2018 IPR007326 Lipoprotein-associated domain JO41_11375 b59ef30fbf9ff840020835b37863c9b3 312 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 6 292 1.7E-99 T 14-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JO41_11375 b59ef30fbf9ff840020835b37863c9b3 312 Pfam PF03313 Serine dehydratase alpha chain 18 277 1.9E-70 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit JO41_09275 edd9776579e80d5a2148b921e2918ccb 294 Gene3D G3DSA:1.10.3720.10 4 281 4.4E-57 T 14-10-2018 IPR035906 MetI-like superfamily JO41_09275 edd9776579e80d5a2148b921e2918ccb 294 SUPERFAMILY SSF161098 10 293 6.8E-61 T 14-10-2018 IPR035906 MetI-like superfamily JO41_09275 edd9776579e80d5a2148b921e2918ccb 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 283 2.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_07860 b48fd4d8bb196a1475a532f4df8d4cc6 184 SUPERFAMILY SSF52218 1 176 1.01E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_07860 b48fd4d8bb196a1475a532f4df8d4cc6 184 Gene3D G3DSA:3.40.50.360 1 184 1.4E-58 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JO41_07860 b48fd4d8bb196a1475a532f4df8d4cc6 184 Pfam PF02525 Flavodoxin-like fold 3 170 1.5E-41 T 14-10-2018 IPR003680 Flavodoxin-like fold JO41_02765 f981104b7894701179abb981f5ff5dce 151 SUPERFAMILY SSF52540 22 132 3.95E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_02765 f981104b7894701179abb981f5ff5dce 151 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 135 5.2E-36 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JO41_02765 f981104b7894701179abb981f5ff5dce 151 Gene3D G3DSA:3.40.50.300 1 148 1.4E-39 T 14-10-2018 JO41_02765 f981104b7894701179abb981f5ff5dce 151 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 130 6.5E-36 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JO41_05975 236e17951764817524a15925cf777873 105 Pfam PF03551 Transcriptional regulator PadR-like family 14 80 9.8E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal JO41_05975 236e17951764817524a15925cf777873 105 Gene3D G3DSA:1.10.10.10 3 105 5.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_05975 236e17951764817524a15925cf777873 105 SUPERFAMILY SSF46785 3 101 1.68E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_07710 cbcbc14dc045de0b6c771cfc5ff7b06a 140 Gene3D G3DSA:1.20.120.610 1 140 7.4E-16 T 14-10-2018 JO41_07710 cbcbc14dc045de0b6c771cfc5ff7b06a 140 SUPERFAMILY SSF81333 76 138 5.89E-11 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily JO41_07710 cbcbc14dc045de0b6c771cfc5ff7b06a 140 Pfam PF00137 ATP synthase subunit C 80 138 9.9E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 JO41_05530 3cd904ef80f1dee1011a247aefa4f4d4 206 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 41 188 2.1E-9 T 14-10-2018 IPR019016 CRISPR-associated DxTHG protein JO41_07250 7c827f99dd710f54504903ea6bb1f4a7 253 Gene3D G3DSA:2.60.40.10 42 132 3.3E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 PIRSF PIRSF000331 1 483 1.5E-178 T 14-10-2018 IPR004925 HpaB/PvcC/4-BUDH JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 Gene3D G3DSA:2.40.110.10 145 275 1.6E-47 T 14-10-2018 JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 Gene3D G3DSA:1.10.3140.10 2 144 1.3E-63 T 14-10-2018 JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 281 479 3.3E-78 T 14-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 274 1.1E-109 T 14-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 SUPERFAMILY SSF56645 3 274 7.98E-93 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 SUPERFAMILY SSF47203 265 481 1.28E-71 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JO41_12025 47a449e45e6728b518b3ba3523326b0c 483 Gene3D G3DSA:1.20.140.10 278 482 1.8E-87 T 14-10-2018 JO41_05660 8a3e8d3c66e318c74e4d82a999276172 113 SUPERFAMILY SSF47598 66 107 3.71E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO41_05660 8a3e8d3c66e318c74e4d82a999276172 113 Pfam PF05534 HicB family 52 102 6.3E-23 T 14-10-2018 IPR008651 Uncharacterised protein family HicB JO41_05660 8a3e8d3c66e318c74e4d82a999276172 113 SUPERFAMILY SSF143100 1 73 5.23E-15 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like JO41_00045 c206324465bb168b1976feb24d27cdb1 464 Pfam PF00589 Phage integrase family 262 444 1.9E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JO41_00045 c206324465bb168b1976feb24d27cdb1 464 Gene3D G3DSA:1.10.443.10 238 455 1.4E-25 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JO41_00045 c206324465bb168b1976feb24d27cdb1 464 SUPERFAMILY SSF56349 164 447 1.53E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JO41_09670 f8a16393c7275e3b0fd2e280141d501e 377 Pfam PF10080 Predicted membrane protein (DUF2318) 276 376 1.7E-31 T 14-10-2018 IPR018758 Domain of unknown function DUF2318, membrane JO41_09645 9be68c7b2fecb0e9e6e94b61818c7d6e 418 Pfam PF00999 Sodium/hydrogen exchanger family 21 400 5.4E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JO41_09645 9be68c7b2fecb0e9e6e94b61818c7d6e 418 Gene3D G3DSA:1.20.1530.20 12 410 1.5E-83 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JO41_12180 3008640b96863f52ca370ad5efad7fc7 268 SUPERFAMILY SSF52058 28 254 9.86E-16 T 14-10-2018 JO41_12180 3008640b96863f52ca370ad5efad7fc7 268 Gene3D G3DSA:3.80.10.10 8 266 5.2E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_10325 17b4dc5e8ed3002e9a7b123905c5522d 133 Pfam PF06935 Protein of unknown function (DUF1284) 21 119 3.6E-24 T 14-10-2018 IPR009702 Protein of unknown function DUF1284 JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 SMART SM00930 274 349 1.4E-16 T 14-10-2018 IPR018449 NIL domain JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 Pfam PF00005 ABC transporter 22 177 4.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 Pfam PF09383 NIL domain 276 346 7.0E-15 T 14-10-2018 IPR018449 NIL domain JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 Gene3D G3DSA:3.30.70.260 266 353 2.9E-17 T 14-10-2018 JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 SUPERFAMILY SSF52540 1 248 3.64E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 Gene3D G3DSA:3.40.50.300 1 265 4.8E-75 T 14-10-2018 JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 SUPERFAMILY SSF55021 265 345 4.46E-16 T 14-10-2018 JO41_11400 d1da4687c32797f7f29dd4f3e1f811bf 358 SMART SM00382 30 226 3.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_00185 97078d392aa1e653fe7fad37953283f8 256 Gene3D G3DSA:3.20.20.70 3 219 9.7E-25 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JO41_00185 97078d392aa1e653fe7fad37953283f8 256 Pfam PF04055 Radical SAM superfamily 21 145 5.1E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JO41_00185 97078d392aa1e653fe7fad37953283f8 256 SUPERFAMILY SSF102114 21 147 1.7E-15 T 14-10-2018 JO41_00185 97078d392aa1e653fe7fad37953283f8 256 Pfam PF13353 4Fe-4S single cluster domain 17 111 3.0E-8 T 14-10-2018 JO41_12785 2083f2ca3007fd37fc50c6247f731148 658 Pfam PF06152 Phage minor capsid protein 2 2 354 1.1E-94 T 14-10-2018 IPR009319 Bacteriophage A118, Gp4, minor capsid GO:0005198 JO41_09315 e4ef5bf7c84bbc6072f6453e80e5fd66 389 Pfam PF13635 Domain of unknown function (DUF4143) 180 336 1.3E-23 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 JO41_09315 e4ef5bf7c84bbc6072f6453e80e5fd66 389 Pfam PF13173 AAA domain 18 134 3.2E-22 T 14-10-2018 JO41_09315 e4ef5bf7c84bbc6072f6453e80e5fd66 389 SUPERFAMILY SSF52540 18 135 4.75E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_06100 9cd7d6fc252d8ab38221aee48f464e02 113 SUPERFAMILY SSF50118 2 112 1.5E-29 T 14-10-2018 JO41_06100 9cd7d6fc252d8ab38221aee48f464e02 113 Gene3D G3DSA:2.30.30.110 1 112 8.2E-34 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JO41_06100 9cd7d6fc252d8ab38221aee48f464e02 113 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 109 1.8E-22 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JO41_06100 9cd7d6fc252d8ab38221aee48f464e02 113 PIRSF PIRSF033490 1 112 2.3E-29 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JO41_09675 2023819c5c403f5475ec6b567fd383ae 425 Pfam PF02687 FtsX-like permease family 329 409 6.7E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_09675 2023819c5c403f5475ec6b567fd383ae 425 Pfam PF12704 MacB-like periplasmic core domain 18 231 6.4E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_09280 9a8006fb683d3da62ef5e5055c6ed5f0 88 SUPERFAMILY SSF58104 3 86 2.49E-6 T 14-10-2018 JO41_09280 9a8006fb683d3da62ef5e5055c6ed5f0 88 Gene3D G3DSA:1.10.287.950 1 86 6.6E-7 T 14-10-2018 JO41_03950 6a34c593da851276f9b586325a2d77c5 177 SUPERFAMILY SSF55469 1 175 7.2E-47 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JO41_03950 6a34c593da851276f9b586325a2d77c5 177 Gene3D G3DSA:3.40.109.10 1 177 1.3E-46 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JO41_03950 6a34c593da851276f9b586325a2d77c5 177 Pfam PF00881 Nitroreductase family 7 64 7.2E-14 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JO41_03950 6a34c593da851276f9b586325a2d77c5 177 Pfam PF00881 Nitroreductase family 66 156 2.3E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JO41_06020 add5c5679077b8a9aac883d45bb2bddb 140 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 139 2.2E-48 T 14-10-2018 JO41_06020 add5c5679077b8a9aac883d45bb2bddb 140 Gene3D G3DSA:3.90.1010.10 1 140 1.9E-40 T 14-10-2018 JO41_06020 add5c5679077b8a9aac883d45bb2bddb 140 Pfam PF01592 NifU-like N terminal domain 7 126 2.6E-16 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 JO41_06020 add5c5679077b8a9aac883d45bb2bddb 140 SUPERFAMILY SSF82649 3 139 1.05E-37 T 14-10-2018 JO41_09030 833e6269ccd710aed56e164d39356ef3 149 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 13 145 13.473 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 JO41_09030 833e6269ccd710aed56e164d39356ef3 149 SUPERFAMILY SSF75420 13 85 1.96E-11 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily JO41_09030 833e6269ccd710aed56e164d39356ef3 149 Pfam PF02576 RimP N-terminal domain 16 84 4.2E-13 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal JO41_09030 833e6269ccd710aed56e164d39356ef3 149 SUPERFAMILY SSF74942 86 146 1.7E-5 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily JO41_09030 833e6269ccd710aed56e164d39356ef3 149 Gene3D G3DSA:3.30.300.70 8 82 2.2E-8 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily JO41_01385 34ecbffdd450d5f49d7fdaa37221f57b 320 SUPERFAMILY SSF118352 268 319 1.11E-9 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JO41_01385 34ecbffdd450d5f49d7fdaa37221f57b 320 Gene3D G3DSA:3.55.30.10 20 269 2.2E-48 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JO41_01385 34ecbffdd450d5f49d7fdaa37221f57b 320 SUPERFAMILY SSF64397 21 274 3.27E-46 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JO41_01385 34ecbffdd450d5f49d7fdaa37221f57b 320 Gene3D G3DSA:3.90.1280.10 270 320 3.7E-8 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JO41_01385 34ecbffdd450d5f49d7fdaa37221f57b 320 PIRSF PIRSF005261 11 320 5.6E-62 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JO41_01385 34ecbffdd450d5f49d7fdaa37221f57b 320 Pfam PF01430 Hsp33 protein 21 315 7.2E-65 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JO41_03360 093bbd2567a21b71c7d5ab780e3924fa 355 Gene3D G3DSA:3.40.50.2020 81 317 9.8E-35 T 14-10-2018 JO41_03360 093bbd2567a21b71c7d5ab780e3924fa 355 Pfam PF14681 Uracil phosphoribosyltransferase 88 313 3.5E-23 T 14-10-2018 JO41_03360 093bbd2567a21b71c7d5ab780e3924fa 355 SUPERFAMILY SSF53271 88 315 9.96E-30 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO41_06970 0d665c8c8e10cb1f6fc07fd30b54fd90 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 3 59 1.2E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO41_06970 0d665c8c8e10cb1f6fc07fd30b54fd90 77 SUPERFAMILY SSF116842 3 64 5.75E-15 T 14-10-2018 JO41_06970 0d665c8c8e10cb1f6fc07fd30b54fd90 77 Gene3D G3DSA:1.10.287.1040 1 70 8.9E-17 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 JO41_06970 0d665c8c8e10cb1f6fc07fd30b54fd90 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 3 63 12.81 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO41_06970 0d665c8c8e10cb1f6fc07fd30b54fd90 77 Pfam PF02609 Exonuclease VII small subunit 4 55 1.3E-15 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO41_06970 0d665c8c8e10cb1f6fc07fd30b54fd90 77 PIRSF PIRSF006488 1 75 6.7E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JO41_08455 07d17c790be317a04536da54214b980b 309 Pfam PF12146 Serine aminopeptidase, S33 23 288 2.4E-55 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JO41_08455 07d17c790be317a04536da54214b980b 309 SUPERFAMILY SSF53474 2 303 1.2E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_08455 07d17c790be317a04536da54214b980b 309 Gene3D G3DSA:3.40.50.1820 1 306 1.0E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_04595 69d58fe65dcf5f06b1297aba3b9c65f3 135 Gene3D G3DSA:3.40.50.1010 1 133 5.1E-6 T 14-10-2018 JO41_04595 69d58fe65dcf5f06b1297aba3b9c65f3 135 Pfam PF13470 PIN domain 3 116 1.2E-6 T 14-10-2018 IPR002716 PIN domain JO41_04595 69d58fe65dcf5f06b1297aba3b9c65f3 135 SUPERFAMILY SSF88723 1 131 4.91E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_09755 5107af768b7dea1ad6d8a8001a1341fe 308 Pfam PF12146 Serine aminopeptidase, S33 53 282 4.2E-17 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JO41_09755 5107af768b7dea1ad6d8a8001a1341fe 308 SUPERFAMILY SSF53474 28 300 2.75E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_09755 5107af768b7dea1ad6d8a8001a1341fe 308 Gene3D G3DSA:3.40.50.1820 26 306 4.3E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_00895 bbd816f62952dfc6031ec30f79eebf88 340 PIRSF PIRSF027386 1 338 3.7E-106 T 14-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type JO41_00895 bbd816f62952dfc6031ec30f79eebf88 340 Gene3D G3DSA:3.40.190.10 124 233 3.5E-79 T 14-10-2018 JO41_00895 bbd816f62952dfc6031ec30f79eebf88 340 Pfam PF09084 NMT1/THI5 like 89 273 3.5E-14 T 14-10-2018 IPR015168 SsuA/THI5-like JO41_00895 bbd816f62952dfc6031ec30f79eebf88 340 SUPERFAMILY SSF53850 76 335 7.89E-32 T 14-10-2018 JO41_00895 bbd816f62952dfc6031ec30f79eebf88 340 Gene3D G3DSA:3.40.190.10 50 334 3.5E-79 T 14-10-2018 JO41_01000 72ae24b645e231f3749f9daaad5b7ea9 255 Gene3D G3DSA:3.10.50.40 1 69 8.0E-5 T 14-10-2018 JO41_10920 28693134928da242aec2ed8a8171bb85 364 SUPERFAMILY SSF55120 23 362 1.07E-27 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_10920 28693134928da242aec2ed8a8171bb85 364 Pfam PF00849 RNA pseudouridylate synthase 114 306 5.6E-12 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_10610 5c7fbaa5253669805d5aa6dc667931ea 308 SUPERFAMILY SSF110849 58 143 5.76E-7 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JO41_00135 0f1849d84bb1d4f15bf0c7d4ad9854bf 101 SUPERFAMILY SSF141000 6 96 6.54E-14 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 JO41_00135 0f1849d84bb1d4f15bf0c7d4ad9854bf 101 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 25 93 1.1E-7 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JO41_00135 0f1849d84bb1d4f15bf0c7d4ad9854bf 101 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 12 97 4.7E-13 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JO41_00135 0f1849d84bb1d4f15bf0c7d4ad9854bf 101 Gene3D G3DSA:1.10.20.60 3 96 6.7E-10 T 14-10-2018 JO41_11760 657442e72bf6b0c979c46b3c08700489 242 Gene3D G3DSA:3.30.70.1230 42 225 1.4E-9 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_11760 657442e72bf6b0c979c46b3c08700489 242 SUPERFAMILY SSF55073 43 197 4.24E-11 T 14-10-2018 IPR029787 Nucleotide cyclase JO41_07680 6c5e6ff1983dccdbdf5063e979d8f0d2 240 Pfam PF03692 Putative zinc- or iron-chelating domain 42 124 3.9E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein JO41_06540 543f25fa791cfc77ae8d4d8033029aaf 217 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 61 78 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JO41_06540 543f25fa791cfc77ae8d4d8033029aaf 217 Gene3D G3DSA:1.10.10.10 130 211 6.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_06540 543f25fa791cfc77ae8d4d8033029aaf 217 Gene3D G3DSA:2.60.120.10 3 125 5.0E-31 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JO41_06540 543f25fa791cfc77ae8d4d8033029aaf 217 SUPERFAMILY SSF46785 131 204 8.44E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_06540 543f25fa791cfc77ae8d4d8033029aaf 217 SUPERFAMILY SSF51206 12 120 5.76E-29 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JO41_06540 543f25fa791cfc77ae8d4d8033029aaf 217 Pfam PF00027 Cyclic nucleotide-binding domain 13 96 1.5E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_06540 543f25fa791cfc77ae8d4d8033029aaf 217 SMART SM00100 1 111 1.8E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JO41_10480 37ddd38b6e066fa4f045035317e1ccd7 373 Pfam PF00953 Glycosyl transferase family 4 115 293 2.4E-28 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 JO41_10480 37ddd38b6e066fa4f045035317e1ccd7 373 ProSitePatterns PS01348 MraY family signature 2. 197 208 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JO41_07770 a6ab7737665fc575ddb26ca08a225045 202 Gene3D G3DSA:3.40.50.880 1 196 2.8E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_07770 a6ab7737665fc575ddb26ca08a225045 202 Pfam PF03575 Peptidase family S51 10 192 3.0E-44 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 JO41_07770 a6ab7737665fc575ddb26ca08a225045 202 SUPERFAMILY SSF52317 3 195 1.06E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JO41_03120 e0c30c04f7de9259b2f31c9d3ce4179d 469 Pfam PF01943 Polysaccharide biosynthesis protein 3 258 1.1E-12 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 JO41_11350 7b657e87b6de0e10d4c5a2be0693bcbf 479 Pfam PF03577 Peptidase family C69 8 409 2.7E-149 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 JO41_11350 7b657e87b6de0e10d4c5a2be0693bcbf 479 Gene3D G3DSA:3.60.60.10 9 216 1.8E-8 T 14-10-2018 JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 SUPERFAMILY SSF48403 31 172 2.49E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 Gene3D G3DSA:1.25.40.20 12 182 2.0E-28 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 PRINTS PR01415 Ankyrin repeat signature 120 134 2.2E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 PRINTS PR01415 Ankyrin repeat signature 73 88 2.2E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 SMART SM00248 104 133 2.4E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 SMART SM00248 137 173 76.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 SMART SM00248 37 68 1600.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 SMART SM00248 72 100 1200.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JO41_12365 f2ea78eb4915b640483e576a91f698d1 354 Pfam PF12796 Ankyrin repeats (3 copies) 50 135 6.3E-13 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JO41_09025 b29766a74a71ae8b56a43fcf502cdfc7 485 Pfam PF13646 HEAT repeats 217 287 3.3E-8 T 14-10-2018 JO41_09025 b29766a74a71ae8b56a43fcf502cdfc7 485 Gene3D G3DSA:1.25.10.10 208 414 2.8E-16 T 14-10-2018 IPR011989 Armadillo-like helical JO41_09025 b29766a74a71ae8b56a43fcf502cdfc7 485 SUPERFAMILY SSF48371 110 364 5.64E-16 T 14-10-2018 IPR016024 Armadillo-type fold JO41_10895 6622771c3b434a082f44bede3d5b336a 396 Pfam PF04311 Protein of unknown function (DUF459) 61 381 5.0E-58 T 14-10-2018 IPR007407 Protein of unknown function DUF459 JO41_10895 6622771c3b434a082f44bede3d5b336a 396 SUPERFAMILY SSF52266 170 386 3.0E-18 T 14-10-2018 JO41_10895 6622771c3b434a082f44bede3d5b336a 396 Gene3D G3DSA:3.40.50.1110 159 384 6.4E-10 T 14-10-2018 IPR036514 SGNH hydrolase superfamily JO41_00615 008be5f018938f32978c932e045e5204 145 Pfam PF00072 Response regulator receiver domain 27 139 3.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_00615 008be5f018938f32978c932e045e5204 145 SMART SM00448 25 139 2.5E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JO41_00615 008be5f018938f32978c932e045e5204 145 SUPERFAMILY SSF52172 24 144 1.37E-33 T 14-10-2018 IPR011006 CheY-like superfamily JO41_00615 008be5f018938f32978c932e045e5204 145 Gene3D G3DSA:3.40.50.2300 18 145 3.2E-36 T 14-10-2018 JO41_08160 06a10ab4f212ab5d1c9dff3c5baacb74 104 Pfam PF11114 Minor capsid protein 17 96 6.5E-11 T 14-10-2018 IPR021080 Minor capsid protein JO41_12885 06a10ab4f212ab5d1c9dff3c5baacb74 104 Pfam PF11114 Minor capsid protein 17 96 6.5E-11 T 14-10-2018 IPR021080 Minor capsid protein JO41_09460 35dda369569cdb2e01caca3ce0cd46db 183 Pfam PF03748 Flagellar basal body-associated protein FliL 104 178 2.0E-6 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 SUPERFAMILY SSF56024 322 488 7.63E-33 T 14-10-2018 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 SMART SM00155 416 443 7.7E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 SMART SM00155 237 264 2.1E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 Pfam PF13396 Phospholipase_D-nuclease N-terminal 40 77 1.8E-5 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 Gene3D G3DSA:3.30.870.10 133 318 4.0E-37 T 14-10-2018 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 Gene3D G3DSA:3.30.870.10 320 500 8.1E-26 T 14-10-2018 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 SUPERFAMILY SSF56024 121 304 8.79E-40 T 14-10-2018 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 Pfam PF13091 PLD-like domain 157 297 3.3E-10 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JO41_00890 1edb6df4c722ae347219da0ffa3f20f1 503 Pfam PF13091 PLD-like domain 344 467 2.9E-19 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JO41_06530 b5275ebe2167f56efafaf093386d3572 286 SMART SM00481 2 67 2.9E-20 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JO41_06530 b5275ebe2167f56efafaf093386d3572 286 SUPERFAMILY SSF89550 1 258 7.98E-49 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JO41_06530 b5275ebe2167f56efafaf093386d3572 286 Pfam PF02811 PHP domain 3 80 1.2E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 JO41_06530 b5275ebe2167f56efafaf093386d3572 286 Gene3D G3DSA:1.10.150.650 95 166 1.2E-88 T 14-10-2018 JO41_06530 b5275ebe2167f56efafaf093386d3572 286 Gene3D G3DSA:3.20.20.140 2 247 1.2E-88 T 14-10-2018 JO41_11065 11b49e9e4d15103d098575672a5f40c5 191 Gene3D G3DSA:3.90.1720.10 31 162 2.3E-37 T 14-10-2018 JO41_11065 11b49e9e4d15103d098575672a5f40c5 191 SUPERFAMILY SSF54001 29 155 7.36E-35 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JO41_11065 11b49e9e4d15103d098575672a5f40c5 191 Pfam PF00877 NlpC/P60 family 46 149 1.4E-26 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JO41_08620 a2328ee7e00aff9c469206ed427226d1 269 Gene3D G3DSA:3.40.50.150 2 246 1.2E-30 T 14-10-2018 JO41_08620 a2328ee7e00aff9c469206ed427226d1 269 PIRSF PIRSF028177 1 268 3.3E-55 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 JO41_08620 a2328ee7e00aff9c469206ed427226d1 269 SUPERFAMILY SSF53335 10 240 3.99E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JO41_08620 a2328ee7e00aff9c469206ed427226d1 269 Pfam PF04072 Leucine carboxyl methyltransferase 14 172 1.1E-15 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JO41_03140 4617ba327f8fb434ffa7681664bf7d5c 412 SUPERFAMILY SSF52540 6 213 2.96E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03140 4617ba327f8fb434ffa7681664bf7d5c 412 Pfam PF13635 Domain of unknown function (DUF4143) 210 358 5.3E-11 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 JO41_03140 4617ba327f8fb434ffa7681664bf7d5c 412 Pfam PF13173 AAA domain 27 156 1.8E-34 T 14-10-2018 JO41_01115 d273dd7bfbe5370555ac5b60a5ac2917 257 Hamap MF_01805 Segregation and condensation protein A [scpA]. 17 249 19.848 T 14-10-2018 IPR003768 Segregation and condensation protein A JO41_01115 d273dd7bfbe5370555ac5b60a5ac2917 257 Pfam PF02616 Segregation and condensation protein ScpA 34 245 4.4E-24 T 14-10-2018 IPR003768 Segregation and condensation protein A JO41_05640 f5a86672fb0c549c920f68652a5766b3 224 SUPERFAMILY SSF56037 59 212 2.88E-20 T 14-10-2018 JO41_05640 f5a86672fb0c549c920f68652a5766b3 224 SMART SM00873 62 213 3.0E-6 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO41_05640 f5a86672fb0c549c920f68652a5766b3 224 Pfam PF03483 B3/4 domain 67 193 2.7E-19 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JO41_01020 60e3077e77d9d871faef04e4aef90239 550 Pfam PF03772 Competence protein 273 530 7.5E-39 T 14-10-2018 IPR004477 ComEC/Rec2-related protein JO41_01020 60e3077e77d9d871faef04e4aef90239 550 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 294 467 1.2E-13 T 14-10-2018 IPR004477 ComEC/Rec2-related protein JO41_04580 1cd0ae51a8ed40c15b8b41e6819dace2 427 Pfam PF10895 Domain of unknown function (DUF2715) 30 409 4.8E-69 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO41_11700 5d74bcb187552ca8a5666c219e36ec34 202 Gene3D G3DSA:1.20.1440.20 23 202 1.5E-69 T 14-10-2018 IPR023353 LemA-like domain superfamily JO41_11700 5d74bcb187552ca8a5666c219e36ec34 202 Pfam PF04011 LemA family 13 202 2.3E-74 T 14-10-2018 IPR007156 LemA JO41_11700 5d74bcb187552ca8a5666c219e36ec34 202 SUPERFAMILY SSF140478 33 192 2.22E-57 T 14-10-2018 IPR023353 LemA-like domain superfamily JO41_08055 5aad6be38836de3d0f540905e968a0ca 255 Pfam PF02544 3-oxo-5-alpha-steroid 4-dehydrogenase 102 255 1.2E-34 T 14-10-2018 IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal GO:0005737|GO:0006629|GO:0016021|GO:0016627 JO41_08055 5aad6be38836de3d0f540905e968a0ca 255 PIRSF PIRSF015596 2 255 2.6E-77 T 14-10-2018 IPR016636 3-oxo-5-alpha-steroid 4-dehydrogenase GO:0003865|GO:0008202|GO:0016020|GO:0055114 KEGG: 00140+1.3.1.22|KEGG: 00905+1.3.1.22|MetaCyc: PWY-6032|MetaCyc: PWY-7455|Reactome: R-HSA-193048 JO41_05500 32166c9c0035d8e43581f577993414df 471 Gene3D G3DSA:3.40.710.10 62 336 2.5E-74 T 14-10-2018 JO41_05500 32166c9c0035d8e43581f577993414df 471 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 105 116 8.1E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JO41_05500 32166c9c0035d8e43581f577993414df 471 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 189 202 8.1E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JO41_05500 32166c9c0035d8e43581f577993414df 471 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 162 179 8.1E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JO41_05500 32166c9c0035d8e43581f577993414df 471 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 73 311 1.2E-58 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JO41_05500 32166c9c0035d8e43581f577993414df 471 SUPERFAMILY SSF56601 68 338 9.45E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JO41_05500 32166c9c0035d8e43581f577993414df 471 SUPERFAMILY SSF69189 398 451 3.34E-5 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JO41_11120 c024d014efb268e9f693909d2ce19080 396 Pfam PF05893 Acyl-CoA reductase (LuxC) 75 393 5.3E-29 T 14-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 JO41_11120 c024d014efb268e9f693909d2ce19080 396 SUPERFAMILY SSF53720 28 182 1.06E-6 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JO41_03160 9555720bfa1de0fa4a644e4769d6a089 130 Pfam PF04892 VanZ like family 42 119 3.4E-10 T 14-10-2018 IPR006976 VanZ-like JO41_03415 f7eb1b8d1dee68933db454eda493b58c 257 SUPERFAMILY SSF53271 93 255 7.6E-15 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JO41_03415 f7eb1b8d1dee68933db454eda493b58c 257 Gene3D G3DSA:3.40.50.2020 145 256 5.0E-12 T 14-10-2018 JO41_05545 1dce98d1a540bd8a88af0cca6beb0d66 582 Gene3D G3DSA:3.40.1350.10 420 579 2.7E-19 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JO41_05545 1dce98d1a540bd8a88af0cca6beb0d66 582 Pfam PF09002 Domain of unknown function (DUF1887) 228 570 1.2E-18 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 JO41_05545 1dce98d1a540bd8a88af0cca6beb0d66 582 SUPERFAMILY SSF52980 209 572 2.25E-35 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO41_02460 b67c310699fd712e57086e899c2f57f1 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 416 1.1E-52 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_02460 b67c310699fd712e57086e899c2f57f1 458 Pfam PF01554 MatE 26 189 1.5E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_02460 b67c310699fd712e57086e899c2f57f1 458 Pfam PF01554 MatE 263 410 1.8E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_02460 b67c310699fd712e57086e899c2f57f1 458 PIRSF PIRSF006603 1 456 9.8E-74 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_01630 878a1c83fe551072af0fae329654ba0f 305 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 235 7.8E-64 T 14-10-2018 JO41_01630 878a1c83fe551072af0fae329654ba0f 305 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 305 3.2E-45 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_11995 1c18ee6bac97d5b28d85e64a368a1143 78 SUPERFAMILY SSF47336 31 72 2.62E-6 T 14-10-2018 IPR036736 ACP-like superfamily JO41_11995 1c18ee6bac97d5b28d85e64a368a1143 78 Gene3D G3DSA:1.10.1200.10 1 75 2.0E-9 T 14-10-2018 IPR036736 ACP-like superfamily JO41_04260 ebfe7d5a78aa017c5797dafcf67e2c6d 476 SUPERFAMILY SSF48208 5 405 2.55E-60 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JO41_04260 ebfe7d5a78aa017c5797dafcf67e2c6d 476 Gene3D G3DSA:1.50.10.10 23 385 2.3E-50 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JO41_04260 ebfe7d5a78aa017c5797dafcf67e2c6d 476 Pfam PF01204 Trehalase 181 337 8.2E-11 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 JO41_02845 03a1e9e43df8560fd7e52ea187626cda 287 SUPERFAMILY SSF51261 26 150 3.56E-8 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_02845 03a1e9e43df8560fd7e52ea187626cda 287 Pfam PF01551 Peptidase family M23 47 142 1.4E-8 T 14-10-2018 IPR016047 Peptidase M23 JO41_02845 03a1e9e43df8560fd7e52ea187626cda 287 Gene3D G3DSA:2.70.70.10 14 150 1.3E-13 T 14-10-2018 IPR011055 Duplicated hybrid motif JO41_11405 baaddca998faa0870d0e5a4528fdd64c 234 Gene3D G3DSA:1.10.3720.10 14 226 1.1E-39 T 14-10-2018 IPR035906 MetI-like superfamily JO41_11405 baaddca998faa0870d0e5a4528fdd64c 234 SUPERFAMILY SSF161098 17 211 1.31E-38 T 14-10-2018 IPR035906 MetI-like superfamily JO41_11405 baaddca998faa0870d0e5a4528fdd64c 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 224 4.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_05425 3b05cb42f038c151d6ef2d30b36bce3d 166 Pfam PF05258 Protein of unknown function (DUF721) 7 94 5.6E-12 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 JO41_10230 6addec88d1f60cf9d4d85b808bc9b4f7 205 Pfam PF09335 SNARE associated Golgi protein 37 152 1.8E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein JO41_02805 f88c8b938a97ed1c2f72de3ff14cc587 309 SUPERFAMILY SSF52777 60 297 1.19E-8 T 14-10-2018 JO41_00485 93d58dd36578d03711a4e7d14d801b46 63 Gene3D G3DSA:3.30.920.30 1 60 3.3E-22 T 14-10-2018 IPR038570 HicA superfamily JO41_00485 93d58dd36578d03711a4e7d14d801b46 63 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 60 7.5E-20 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 JO41_00485 93d58dd36578d03711a4e7d14d801b46 63 SUPERFAMILY SSF54786 1 62 3.1E-17 T 14-10-2018 JO41_10790 46c4db54c025ee5043563d6d3364ca7b 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 52 7.0E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_10790 46c4db54c025ee5043563d6d3364ca7b 188 SUPERFAMILY SSF46689 3 68 2.84E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JO41_10790 46c4db54c025ee5043563d6d3364ca7b 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_10790 46c4db54c025ee5043563d6d3364ca7b 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JO41_10790 46c4db54c025ee5043563d6d3364ca7b 188 Gene3D G3DSA:1.10.357.10 1 188 1.5E-24 T 14-10-2018 JO41_02470 9a2cda83cdccf4945d44da35e9bde22f 276 Gene3D G3DSA:3.30.420.10 105 258 1.2E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_02470 9a2cda83cdccf4945d44da35e9bde22f 276 SUPERFAMILY SSF53098 103 256 1.5E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_02470 9a2cda83cdccf4945d44da35e9bde22f 276 Pfam PF00665 Integrase core domain 107 221 4.4E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JO41_05185 a437f9b38bd6ab7efc87447e13537992 551 SMART SM00287 487 550 0.0039 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type JO41_05185 a437f9b38bd6ab7efc87447e13537992 551 Gene3D G3DSA:2.30.30.40 490 549 2.0E-7 T 14-10-2018 JO41_01005 8973698cc175c9092ca7407e68f7f98f 588 Pfam PF01973 Protein of unknown function DUF115 232 382 1.2E-19 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_04125 6cbbe3e7f514640a52921e3e0aee3419 512 Pfam PF11855 Protein of unknown function (DUF3375) 14 511 4.7E-78 T 14-10-2018 IPR021804 Protein of unknown function DUF3375 JO41_11290 2bf87cf68b4a734216486156c96fb533 379 Pfam PF00092 von Willebrand factor type A domain 230 369 3.7E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A JO41_11290 2bf87cf68b4a734216486156c96fb533 379 Gene3D G3DSA:3.40.50.410 155 336 3.8E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_11290 2bf87cf68b4a734216486156c96fb533 379 SUPERFAMILY SSF53300 228 375 4.45E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_07820 8cafdd0ac15f710acf26be85651539f2 291 Pfam PF02517 CAAX protease self-immunity 131 236 4.1E-8 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO41_10220 590b719163fcaa905054b4055bdb6e2a 367 Gene3D G3DSA:1.25.40.10 14 365 1.5E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_09915 4897182100b0348e58b5ef5d8415e071 382 Gene3D G3DSA:1.20.1270.370 12 220 2.5E-63 T 14-10-2018 JO41_09915 4897182100b0348e58b5ef5d8415e071 382 Gene3D G3DSA:3.40.50.11890 30 156 2.5E-63 T 14-10-2018 JO41_09915 4897182100b0348e58b5ef5d8415e071 382 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 38 376 1.2E-44 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit JO41_09915 4897182100b0348e58b5ef5d8415e071 382 Gene3D G3DSA:3.40.50.11900 233 381 7.2E-33 T 14-10-2018 JO41_01340 771aa1d66a30eb0193a0f27d1d9bb285 120 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 40 117 2.4E-14 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO41_01340 771aa1d66a30eb0193a0f27d1d9bb285 120 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 117 5.5E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JO41_02790 ac38c4bd0ef6b3ec4163adc49a42f90b 124 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 17 119 2.0E-26 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JO41_02790 ac38c4bd0ef6b3ec4163adc49a42f90b 124 Gene3D G3DSA:3.30.1330.40 7 120 6.4E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO41_02790 ac38c4bd0ef6b3ec4163adc49a42f90b 124 Pfam PF07736 Chorismate mutase type I 12 119 2.8E-25 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JO41_02790 ac38c4bd0ef6b3ec4163adc49a42f90b 124 SUPERFAMILY SSF55298 12 121 4.08E-24 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JO41_01855 746933a8e52cae3a141c108235582f73 233 Pfam PF00849 RNA pseudouridylate synthase 9 177 4.6E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_01855 746933a8e52cae3a141c108235582f73 233 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 55 69 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_01855 746933a8e52cae3a141c108235582f73 233 SUPERFAMILY SSF55120 2 231 5.6E-51 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JO41_01855 746933a8e52cae3a141c108235582f73 233 Gene3D G3DSA:3.30.2350.10 2 232 6.3E-51 T 14-10-2018 JO41_09120 c773be9a752ec3cd46736c56920048aa 287 Pfam PF00892 EamA-like transporter family 156 283 5.8E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO41_09120 c773be9a752ec3cd46736c56920048aa 287 Pfam PF00892 EamA-like transporter family 10 141 7.7E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JO41_09120 c773be9a752ec3cd46736c56920048aa 287 SUPERFAMILY SSF103481 44 143 3.01E-13 T 14-10-2018 JO41_09120 c773be9a752ec3cd46736c56920048aa 287 SUPERFAMILY SSF103481 188 283 1.31E-13 T 14-10-2018 JO41_05455 b407a715b1ed3eec7c68c80ef936cee1 198 Gene3D G3DSA:1.20.120.1760 3 188 4.8E-9 T 14-10-2018 JO41_05455 b407a715b1ed3eec7c68c80ef936cee1 198 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 75 4.3E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO41_05455 b407a715b1ed3eec7c68c80ef936cee1 198 PIRSF PIRSF000847 1 198 3.5E-45 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JO41_05455 b407a715b1ed3eec7c68c80ef936cee1 198 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 191 6.4E-42 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JO41_05455 b407a715b1ed3eec7c68c80ef936cee1 198 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO41_10495 cc3de00742e1f124cd4b99fdeed6cdb3 92 SUPERFAMILY SSF47598 2 44 7.12E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JO41_06930 356f3a8e570a598329ef0197209d58b5 131 Gene3D G3DSA:3.10.450.50 5 130 8.3E-25 T 14-10-2018 JO41_06930 356f3a8e570a598329ef0197209d58b5 131 Pfam PF12680 SnoaL-like domain 10 113 3.8E-9 T 14-10-2018 IPR037401 SnoaL-like domain JO41_06930 356f3a8e570a598329ef0197209d58b5 131 SUPERFAMILY SSF54427 1 127 3.38E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily JO41_03595 21a59dd8bfb23c9498ba3c515e777083 542 Gene3D G3DSA:3.40.50.300 24 225 1.3E-6 T 14-10-2018 JO41_03595 21a59dd8bfb23c9498ba3c515e777083 542 Pfam PF09820 Predicted AAA-ATPase 10 298 8.5E-101 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO41_03595 21a59dd8bfb23c9498ba3c515e777083 542 SUPERFAMILY SSF52540 31 209 4.78E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03595 21a59dd8bfb23c9498ba3c515e777083 542 Pfam PF08011 PD-(D/E)XK nuclease superfamily 444 537 4.7E-24 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO41_09930 2b2761de02ae97b30cc665cd1d634713 319 ProDom PD416840 MEMBRANE A ANTIGEN TREPONEMAL TMPA PRECURSOR PALMITATE SIGNAL LIPOPROTEIN PROTEIN 5 303 7.0E-49 T 14-10-2018 JO41_04050 8acc4f84b932972e674cbcea4cf90c5c 286 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 8 281 2.6E-91 T 14-10-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family JO41_08795 4c5fbd72cdf90fc837c4f32bced5b5ce 919 SUPERFAMILY SSF52540 218 451 1.13E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_08795 4c5fbd72cdf90fc837c4f32bced5b5ce 919 Pfam PF12705 PD-(D/E)XK nuclease superfamily 635 912 9.9E-27 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JO41_08795 4c5fbd72cdf90fc837c4f32bced5b5ce 919 SUPERFAMILY SSF52980 635 830 2.41E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JO41_05905 415329a90639a5271011a01ca7af6c20 148 Gene3D G3DSA:3.40.930.10 1 148 4.3E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JO41_05905 415329a90639a5271011a01ca7af6c20 148 SUPERFAMILY SSF55804 1 148 2.22E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JO41_05905 415329a90639a5271011a01ca7af6c20 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 8.5E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JO41_10615 761cb800991e84accd172d2a31bd8f88 194 Pfam PF02417 Chromate transporter 10 173 5.5E-43 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 JO41_03095 26b19dc73b7f4e404464e500accee762 305 Pfam PF14897 EpsG family 1 301 1.5E-53 T 14-10-2018 JO41_00645 79fc9013791f465df21dec8cdcc981bb 105 Pfam PF00085 Thioredoxin 2 103 2.9E-20 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 JO41_00645 79fc9013791f465df21dec8cdcc981bb 105 Gene3D G3DSA:3.40.30.10 1 105 3.1E-23 T 14-10-2018 JO41_00645 79fc9013791f465df21dec8cdcc981bb 105 SUPERFAMILY SSF52833 2 105 3.63E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JO41_00645 79fc9013791f465df21dec8cdcc981bb 105 PIRSF PIRSF000077 1 105 6.3E-22 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JO41_03625 b707b39d07617441e4cf9db8449ed4d0 281 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 15 279 1.3E-41 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_03625 b707b39d07617441e4cf9db8449ed4d0 281 Pfam PF12784 PD-(D/E)XK nuclease family transposase 14 235 8.9E-58 T 14-10-2018 JO41_12685 3e88ce0a9c9d82805d40e180b9f45159 492 Pfam PF07083 Protein of unknown function (DUF1351) 209 364 1.0E-24 T 14-10-2018 IPR009785 Lactobacillus prophage Lj928, Orf309 JO41_11605 5617c2a77212bd40e01735f912ddabc2 320 Gene3D G3DSA:3.80.10.10 31 176 1.5E-43 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_11605 5617c2a77212bd40e01735f912ddabc2 320 Pfam PF13306 Leucine rich repeats (6 copies) 217 293 2.4E-14 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_11605 5617c2a77212bd40e01735f912ddabc2 320 Pfam PF13306 Leucine rich repeats (6 copies) 119 205 7.0E-17 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_11605 5617c2a77212bd40e01735f912ddabc2 320 Pfam PF13306 Leucine rich repeats (6 copies) 39 91 4.2E-13 T 14-10-2018 IPR026906 Leucine rich repeat 5 JO41_11605 5617c2a77212bd40e01735f912ddabc2 320 SUPERFAMILY SSF52058 44 283 9.52E-15 T 14-10-2018 JO41_11605 5617c2a77212bd40e01735f912ddabc2 320 Gene3D G3DSA:3.80.10.10 178 311 1.4E-28 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_01685 9e03f44701f31f8b687fb0dee7ece41d 260 Pfam PF01925 Sulfite exporter TauE/SafE 13 248 7.4E-39 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JO41_03720 729e0b412dc37c75720ce7369e44c488 661 Gene3D G3DSA:3.40.50.300 6 259 4.0E-86 T 14-10-2018 JO41_03720 729e0b412dc37c75720ce7369e44c488 661 Pfam PF13361 UvrD-like helicase C-terminal domain 263 609 1.7E-72 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JO41_03720 729e0b412dc37c75720ce7369e44c488 661 Gene3D G3DSA:1.10.10.160 109 175 4.0E-86 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JO41_03720 729e0b412dc37c75720ce7369e44c488 661 Gene3D G3DSA:3.40.50.300 266 626 5.5E-115 T 14-10-2018 JO41_03720 729e0b412dc37c75720ce7369e44c488 661 SUPERFAMILY SSF52540 4 635 4.21E-159 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_03720 729e0b412dc37c75720ce7369e44c488 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 152 258 3.5E-34 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JO41_03720 729e0b412dc37c75720ce7369e44c488 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 124 1.8E-36 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JO41_03720 729e0b412dc37c75720ce7369e44c488 661 Gene3D G3DSA:1.10.486.10 369 538 5.5E-115 T 14-10-2018 JO41_08610 9b6a6f2f84613e3a8b0f026d43412662 515 Pfam PF01266 FAD dependent oxidoreductase 3 377 1.6E-68 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JO41_08610 9b6a6f2f84613e3a8b0f026d43412662 515 Gene3D G3DSA:3.30.9.10 86 338 1.8E-125 T 14-10-2018 JO41_08610 9b6a6f2f84613e3a8b0f026d43412662 515 Gene3D G3DSA:1.10.10.1100 408 485 2.2E-22 T 14-10-2018 JO41_08610 9b6a6f2f84613e3a8b0f026d43412662 515 SUPERFAMILY SSF51905 1 379 4.32E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_08610 9b6a6f2f84613e3a8b0f026d43412662 515 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 475 9.3E-17 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JO41_08610 9b6a6f2f84613e3a8b0f026d43412662 515 Gene3D G3DSA:3.50.50.60 3 372 1.8E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JO41_08610 9b6a6f2f84613e3a8b0f026d43412662 515 SUPERFAMILY SSF54373 243 334 1.57E-7 T 14-10-2018 JO41_12305 4e8e686c9b6cd9f9eaed471c0e70a4ae 146 Pfam PF15560 Immunity protein 12 1 138 6.2E-87 T 14-10-2018 IPR029088 Immunity protein 12 JO41_01870 cd2f52b112756c4ee5321286e3ebd28f 399 Pfam PF00665 Integrase core domain 184 293 1.3E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JO41_01870 cd2f52b112756c4ee5321286e3ebd28f 399 SUPERFAMILY SSF53098 183 319 1.08E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_01870 cd2f52b112756c4ee5321286e3ebd28f 399 Gene3D G3DSA:3.30.420.10 186 337 2.7E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_10425 90a99e046ee54b2d8f776e01d3634203 245 Pfam PF02361 Cobalt transport protein 16 213 5.4E-18 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO41_01080 36a2e9e7c982b9383cbb3d40ca36a814 93 Gene3D G3DSA:3.30.2310.20 1 93 7.2E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_01080 36a2e9e7c982b9383cbb3d40ca36a814 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 15 93 1.2E-23 T 14-10-2018 IPR007711 Toxin HigB-1 JO41_01080 36a2e9e7c982b9383cbb3d40ca36a814 93 SUPERFAMILY SSF143011 15 93 3.4E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JO41_09380 a65749670ec98f9636e61d570c226b10 201 SUPERFAMILY SSF53474 4 201 1.52E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_09380 a65749670ec98f9636e61d570c226b10 201 Gene3D G3DSA:3.40.50.1820 2 198 6.7E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_05055 86944fef656aa705620874c989573383 90 Gene3D G3DSA:3.40.1620.40 5 59 3.7E-6 T 14-10-2018 JO41_05055 86944fef656aa705620874c989573383 90 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 60 1.4E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JO41_05055 86944fef656aa705620874c989573383 90 SUPERFAMILY SSF143120 7 84 4.71E-11 T 14-10-2018 IPR036165 YefM-like superfamily JO41_02235 10fa47f6b5b7f8b10a9f2a7149ccf124 84 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 9 72 2.5E-9 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB JO41_01575 a5d23562f77b8ea37a177f255f25ddc6 559 Pfam PF17239 Family of unknown function (DUF5312) 8 518 2.6E-9 T 14-10-2018 IPR035196 Protein of unknown function DUF5312 JO41_00605 da17276e1b56174dc1fc615b03417515 335 SMART SM00909 229 320 2.5E-23 T 14-10-2018 IPR019606 GerMN domain JO41_00605 da17276e1b56174dc1fc615b03417515 335 Pfam PF10646 Sporulation and spore germination 202 316 4.9E-19 T 14-10-2018 IPR019606 GerMN domain JO41_12840 58030f3a8aa13b946b106b100bebe666 289 ProDom PD566665 CAPSID GP34 MAIN MAJOR LJ928 STRUCTURAL PROPHAGE GP34-LIKE LIN2390 DIRECT 28 270 1.0E-21 T 14-10-2018 JO41_08205 58030f3a8aa13b946b106b100bebe666 289 ProDom PD566665 CAPSID GP34 MAIN MAJOR LJ928 STRUCTURAL PROPHAGE GP34-LIKE LIN2390 DIRECT 28 270 1.0E-21 T 14-10-2018 JO41_07540 fccdb8ff0b66cfe8fd413a76c6f753f7 149 SUPERFAMILY SSF46785 4 133 7.26E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_07540 fccdb8ff0b66cfe8fd413a76c6f753f7 149 Gene3D G3DSA:1.10.10.10 1 80 4.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_07540 fccdb8ff0b66cfe8fd413a76c6f753f7 149 Pfam PF01475 Ferric uptake regulator family 8 128 4.4E-22 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JO41_07540 fccdb8ff0b66cfe8fd413a76c6f753f7 149 Gene3D G3DSA:3.30.1490.190 84 143 1.3E-17 T 14-10-2018 JO41_11635 7c7e361c938aea3e42a2979314f40d7c 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 12 196 2.2E-58 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_11635 7c7e361c938aea3e42a2979314f40d7c 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 10 196 6.3E-44 T 14-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane JO41_04150 17f67a2f40bc02254af61982dd7a0e7a 194 Pfam PF13835 Domain of unknown function (DUF4194) 11 184 1.6E-31 T 14-10-2018 IPR025449 Protein of unknown function DUF4194 JO41_07805 41dce3a801d92fe9a2f23e7011f0c113 133 Gene3D G3DSA:3.40.50.1010 1 131 5.5E-34 T 14-10-2018 JO41_07805 41dce3a801d92fe9a2f23e7011f0c113 133 Pfam PF01850 PIN domain 2 123 2.3E-14 T 14-10-2018 IPR002716 PIN domain JO41_07805 41dce3a801d92fe9a2f23e7011f0c113 133 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 129 9.881 T 14-10-2018 IPR022907 VapC family GO:0004540 JO41_07805 41dce3a801d92fe9a2f23e7011f0c113 133 SUPERFAMILY SSF88723 1 131 5.89E-34 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_10405 e081a6f8919df4139cdcac183cbc8793 733 Pfam PF03235 Protein of unknown function DUF262 8 226 2.3E-32 T 14-10-2018 IPR004919 Domain of unknown function DUF262 JO41_10405 e081a6f8919df4139cdcac183cbc8793 733 Pfam PF07510 Protein of unknown function (DUF1524) 432 566 1.8E-25 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 JO41_01595 b115777452f3aed905f81259c4ae102b 267 Gene3D G3DSA:3.40.190.10 111 216 1.0E-96 T 14-10-2018 JO41_01595 b115777452f3aed905f81259c4ae102b 267 Gene3D G3DSA:3.40.190.10 33 258 1.0E-96 T 14-10-2018 JO41_01595 b115777452f3aed905f81259c4ae102b 267 Pfam PF03180 NLPA lipoprotein 31 266 5.7E-92 T 14-10-2018 IPR004872 Lipoprotein NlpA family JO41_01595 b115777452f3aed905f81259c4ae102b 267 PIRSF PIRSF002854 1 267 1.4E-104 T 14-10-2018 IPR004872 Lipoprotein NlpA family JO41_01595 b115777452f3aed905f81259c4ae102b 267 SUPERFAMILY SSF53850 31 265 7.6E-78 T 14-10-2018 JO41_01455 1b3c5eace69831692715d797324d4ce4 95 SUPERFAMILY SSF69754 1 94 3.92E-16 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JO41_01455 1b3c5eace69831692715d797324d4ce4 95 Gene3D G3DSA:3.30.160.100 1 93 2.0E-13 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JO41_01455 1b3c5eace69831692715d797324d4ce4 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 6.0E-13 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JO41_02260 565dee74c5381632599244248f57a46a 228 Pfam PF01076 Plasmid recombination enzyme 1 187 4.0E-28 T 14-10-2018 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 JO41_02260 565dee74c5381632599244248f57a46a 228 Gene3D G3DSA:3.30.930.30 3 180 1.0E-38 T 14-10-2018 JO41_04890 df5e77e24681ff37a293c22b5609dec3 97 Pfam PF03683 Uncharacterised protein family (UPF0175) 24 88 1.6E-7 T 14-10-2018 IPR005368 Uncharacterised protein family UPF0175 JO41_01880 43e94613daa762c5ddf82f7318ec79ea 218 Pfam PF06226 Protein of unknown function (DUF1007) 17 218 1.0E-44 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 JO41_04850 2fe525d4cbcc9c1a4c447b30674e92c0 86 Gene3D G3DSA:1.10.1220.10 1 50 3.7E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JO41_04850 2fe525d4cbcc9c1a4c447b30674e92c0 86 Pfam PF04221 RelB antitoxin 5 53 2.7E-9 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_04850 2fe525d4cbcc9c1a4c447b30674e92c0 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 54 9.4E-17 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ JO41_00735 55d52b91a0ae58cba516c1f348235273 77 Pfam PF12668 Protein of unknown function (DUF3791) 12 71 1.4E-16 T 14-10-2018 IPR024269 Protein of unknown function DUF3791 JO41_12515 30ff69ee6dbfcdacf4481d595caf62a2 426 Pfam PF12704 MacB-like periplasmic core domain 30 228 2.7E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_12515 30ff69ee6dbfcdacf4481d595caf62a2 426 Pfam PF02687 FtsX-like permease family 294 418 3.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_10590 9c9d8598e4f027de0d604cbd9d59fd7d 137 Gene3D G3DSA:1.25.40.10 26 133 2.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_10590 9c9d8598e4f027de0d604cbd9d59fd7d 137 SUPERFAMILY SSF48452 36 104 9.36E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_06815 49c41e3abeab524e59a46a4f6d6bc8ff 252 Pfam PF04536 TPM domain 35 157 1.4E-37 T 14-10-2018 IPR007621 TPM domain JO41_06815 49c41e3abeab524e59a46a4f6d6bc8ff 252 Gene3D G3DSA:3.10.310.50 23 165 7.5E-47 T 14-10-2018 JO41_04505 06bc4a4bb9b0c09666f1d30751b307ff 222 Pfam PF06912 Protein of unknown function (DUF1275) 15 214 3.4E-39 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 JO41_12290 83b868d8af20652dc26e2acb53f413a8 497 SUPERFAMILY SSF52058 167 351 6.12E-7 T 14-10-2018 JO41_12290 83b868d8af20652dc26e2acb53f413a8 497 Gene3D G3DSA:3.80.10.10 139 374 2.2E-8 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_10620 6cdbc19b4484b1ab572fa06652f7a053 187 Pfam PF02417 Chromate transporter 6 183 8.2E-40 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 JO41_06260 a49181639b79924369ae9762c422095f 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 259 6.7E-70 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JO41_06260 a49181639b79924369ae9762c422095f 269 Pfam PF08543 Phosphomethylpyrimidine kinase 11 259 7.4E-76 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 JO41_06260 a49181639b79924369ae9762c422095f 269 SUPERFAMILY SSF53613 3 264 1.23E-63 T 14-10-2018 IPR029056 Ribokinase-like JO41_06260 a49181639b79924369ae9762c422095f 269 Gene3D G3DSA:3.40.1190.20 1 267 7.5E-74 T 14-10-2018 IPR029056 Ribokinase-like JO41_03560 d530e0654172324d5433909c6afb1ad4 659 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 104 2.5E-16 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 JO41_03560 d530e0654172324d5433909c6afb1ad4 659 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 384 640 2.4E-53 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 JO41_06170 c570b813604328263b907a7ba8bef951 103 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 12 90 1.7E-19 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system JO41_06170 c570b813604328263b907a7ba8bef951 103 Gene3D G3DSA:3.10.450.530 2 93 2.2E-17 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily JO41_06515 46321f3970405425876a7b9e3632080f 429 PIRSF PIRSF011588 1 429 5.0E-207 T 14-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 JO41_06515 46321f3970405425876a7b9e3632080f 429 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 1 426 1.1E-196 T 14-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 JO41_10400 03fd3ad7bd1d195c0a3a4c38ae5d2e2e 1046 SUPERFAMILY SSF53098 581 1046 4.3E-62 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JO41_10400 03fd3ad7bd1d195c0a3a4c38ae5d2e2e 1046 Gene3D G3DSA:3.30.420.10 795 1044 3.9E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JO41_10400 03fd3ad7bd1d195c0a3a4c38ae5d2e2e 1046 Pfam PF13289 SIR2-like domain 138 258 2.0E-15 T 14-10-2018 IPR039444 SIR2-like domain JO41_10400 03fd3ad7bd1d195c0a3a4c38ae5d2e2e 1046 SUPERFAMILY SSF52467 27 239 1.59E-13 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JO41_06165 49eadb1977b92ec949cd9bef51776b15 89 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 24 77 4.3E-8 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JO41_01735 89adf23f4d3e14f9d95fcc71a3680d4f 264 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 13 262 9.6E-50 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA JO41_01735 89adf23f4d3e14f9d95fcc71a3680d4f 264 Pfam PF12784 PD-(D/E)XK nuclease family transposase 16 177 1.7E-16 T 14-10-2018 JO41_00965 a2d8c25f65de47d8aa36483c2575c401 470 PIRSF PIRSF006603 1 460 1.0E-49 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_00965 a2d8c25f65de47d8aa36483c2575c401 470 Pfam PF01554 MatE 25 186 2.1E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_00965 a2d8c25f65de47d8aa36483c2575c401 470 Pfam PF01554 MatE 263 420 4.0E-8 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_10630 05ba651e636a54f5a4963cb5449ef68e 492 Pfam PF07556 Protein of unknown function (DUF1538) 272 482 2.1E-59 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 JO41_10630 05ba651e636a54f5a4963cb5449ef68e 492 Pfam PF07556 Protein of unknown function (DUF1538) 18 228 1.7E-56 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 JO41_01545 10e8094ce2d65f5937b2833da444bb80 208 Pfam PF02677 Uncharacterized BCR, COG1636 28 206 2.3E-62 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 JO41_07060 53419cafc52fb08bcb6cd2e9d1481579 431 Pfam PF03390 2-hydroxycarboxylate transporter family 10 425 1.4E-142 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 JO41_07060 53419cafc52fb08bcb6cd2e9d1481579 431 PIRSF PIRSF005348 1 431 2.7E-148 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 JO41_00040 1332c028faca433eaf94ed434dcb2af9 123 SUPERFAMILY SSF46785 19 99 9.52E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JO41_00040 1332c028faca433eaf94ed434dcb2af9 123 Pfam PF09639 YjcQ protein 20 102 2.1E-17 T 14-10-2018 IPR018597 Bacteriophage Tuc2009, YjcQ JO41_00040 1332c028faca433eaf94ed434dcb2af9 123 Gene3D G3DSA:1.10.10.10 17 101 7.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JO41_09865 f8fa3c2d43955a8df4e77718b77948ed 402 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 4 400 23.014 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO41_09865 f8fa3c2d43955a8df4e77718b77948ed 402 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 4 398 3.3E-114 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO41_09865 f8fa3c2d43955a8df4e77718b77948ed 402 Pfam PF03616 Sodium/glutamate symporter 5 365 7.1E-118 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO41_04790 b615a252f690daf5375fb0ce3fd4581a 407 Pfam PF02687 FtsX-like permease family 304 400 1.0E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JO41_04790 b615a252f690daf5375fb0ce3fd4581a 407 Pfam PF12704 MacB-like periplasmic core domain 19 242 6.6E-25 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JO41_12265 a89fdea59493afdbda2bfd091c470cc3 237 Pfam PF14025 Protein of unknown function (DUF4241) 46 231 2.1E-60 T 14-10-2018 IPR025335 Protein of unknown function DUF4241 JO41_04905 9a0eca5ba544402fab212a45b61ca4af 170 SUPERFAMILY SSF109854 4 143 1.16E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO41_04905 9a0eca5ba544402fab212a45b61ca4af 170 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 7.1E-59 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 JO41_04905 9a0eca5ba544402fab212a45b61ca4af 170 PIRSF PIRSF031551 1 170 2.8E-64 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 JO41_04905 9a0eca5ba544402fab212a45b61ca4af 170 Gene3D G3DSA:1.20.120.450 1 169 6.8E-60 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JO41_01305 7945c2c07ca934877b0e7312c2821189 70 Pfam PF10047 Protein of unknown function (DUF2281) 6 69 5.4E-12 T 14-10-2018 IPR018739 Domain of unknown function DUF2281 JO41_05365 3b40304b146fb99844982be9286f4744 138 Pfam PF13470 PIN domain 5 115 5.7E-14 T 14-10-2018 IPR002716 PIN domain JO41_05365 3b40304b146fb99844982be9286f4744 138 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 5 114 1.8E-13 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component JO41_05365 3b40304b146fb99844982be9286f4744 138 Gene3D G3DSA:3.40.50.1010 5 96 2.2E-5 T 14-10-2018 JO41_05365 3b40304b146fb99844982be9286f4744 138 SUPERFAMILY SSF88723 1 120 2.3E-8 T 14-10-2018 IPR029060 PIN-like domain superfamily JO41_07220 8b99e2eb14db92f2dd3cbf184bdd4631 650 Pfam PF01973 Protein of unknown function DUF115 227 400 9.3E-36 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_09140 1e96458cabad61d20030c3be185b1b45 375 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 325 2.8E-16 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_08085 178113df2de5033b08c80786d94a4a6a 568 Pfam PF08011 PD-(D/E)XK nuclease superfamily 499 563 1.4E-13 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO41_08085 178113df2de5033b08c80786d94a4a6a 568 Gene3D G3DSA:3.40.50.300 22 229 3.2E-5 T 14-10-2018 JO41_08085 178113df2de5033b08c80786d94a4a6a 568 Pfam PF09820 Predicted AAA-ATPase 8 293 7.5E-101 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO41_08085 178113df2de5033b08c80786d94a4a6a 568 SUPERFAMILY SSF52540 38 226 4.04E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04485 5b2e6e6c07859359528e6374e9f4c194 673 Pfam PF13598 Domain of unknown function (DUF4139) 212 505 8.7E-11 T 14-10-2018 IPR037291 Domain of unknown function DUF4139 JO41_03230 3e8a7bd4f13a078a02d531b09db4bd08 502 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 326 439 5.4E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain JO41_03230 3e8a7bd4f13a078a02d531b09db4bd08 502 Pfam PF02554 Carbon starvation protein CstA 158 285 1.0E-21 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 JO41_03230 3e8a7bd4f13a078a02d531b09db4bd08 502 Pfam PF02554 Carbon starvation protein CstA 4 143 8.1E-31 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 JO41_06715 86a994b7d192934b3a58c014eb476376 260 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 211 9.2E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06715 86a994b7d192934b3a58c014eb476376 260 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 188 9.2E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06715 86a994b7d192934b3a58c014eb476376 260 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 134 152 9.2E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06715 86a994b7d192934b3a58c014eb476376 260 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 100 114 9.2E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06715 86a994b7d192934b3a58c014eb476376 260 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 222 231 9.2E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06715 86a994b7d192934b3a58c014eb476376 260 Gene3D G3DSA:3.90.226.10 1 250 5.2E-75 T 14-10-2018 JO41_06715 86a994b7d192934b3a58c014eb476376 260 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 252 2.4E-96 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_06715 86a994b7d192934b3a58c014eb476376 260 Pfam PF01039 Carboxyl transferase domain 34 211 5.6E-16 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JO41_06715 86a994b7d192934b3a58c014eb476376 260 SUPERFAMILY SSF52096 2 254 1.85E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JO41_06715 86a994b7d192934b3a58c014eb476376 260 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 252 34.874 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JO41_05295 d292bfcedc3cf4e5d0a15b54b1772595 537 Pfam PF03553 Na+/H+ antiporter family 156 508 9.5E-51 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JO41_05705 8ea374a72ee40e38f634c9c1669cb4bc 511 Pfam PF17239 Family of unknown function (DUF5312) 98 500 1.1E-13 T 14-10-2018 IPR035196 Protein of unknown function DUF5312 JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 Pfam PF00005 ABC transporter 327 468 4.4E-5 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 SMART SM00382 28 218 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 Gene3D G3DSA:3.40.50.300 311 547 2.6E-26 T 14-10-2018 JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 Gene3D G3DSA:3.40.50.300 1 245 1.1E-47 T 14-10-2018 JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 Pfam PF00005 ABC transporter 20 171 6.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 SUPERFAMILY SSF52540 322 526 1.52E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_04110 3eb0f56e86fb6d5e479437ca452609d4 548 SUPERFAMILY SSF52540 3 231 7.29E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JO41_05280 2cc55563f800451b23d42ec92662c213 298 Pfam PF04018 Domain of unknown function (DUF368) 14 255 2.0E-46 T 14-10-2018 IPR007163 Protein of unknown function DUF368 JO41_12600 9d68f3a9b852573884511d48dac02502 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 304 1.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JO41_12600 9d68f3a9b852573884511d48dac02502 306 SUPERFAMILY SSF161098 94 289 2.22E-22 T 14-10-2018 IPR035906 MetI-like superfamily JO41_12600 9d68f3a9b852573884511d48dac02502 306 Gene3D G3DSA:1.10.3720.10 93 301 3.3E-21 T 14-10-2018 IPR035906 MetI-like superfamily JO41_02745 d2f10e909ec7866c2a2e7544e357b0fc 148 Pfam PF02623 FliW protein 19 137 2.9E-40 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 JO41_02745 d2f10e909ec7866c2a2e7544e357b0fc 148 SUPERFAMILY SSF141457 1 141 4.58E-45 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily JO41_02745 d2f10e909ec7866c2a2e7544e357b0fc 148 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 25.639 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 JO41_02745 d2f10e909ec7866c2a2e7544e357b0fc 148 Gene3D G3DSA:2.30.290.10 1 146 6.8E-50 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily JO41_04770 053b18ca9e3067d10e3d286dd821af46 482 SUPERFAMILY SSF56954 3 471 6.93E-10 T 14-10-2018 JO41_04770 053b18ca9e3067d10e3d286dd821af46 482 Gene3D G3DSA:1.20.1600.10 207 477 1.3E-10 T 14-10-2018 JO41_12315 ddf5fc87dad5173766533fc88d88303d 100 Gene3D G3DSA:1.25.40.10 1 95 2.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12315 ddf5fc87dad5173766533fc88d88303d 100 SMART SM00028 40 73 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12315 ddf5fc87dad5173766533fc88d88303d 100 SMART SM00028 3 36 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12315 ddf5fc87dad5173766533fc88d88303d 100 Pfam PF13181 Tetratricopeptide repeat 4 34 3.6E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JO41_12315 ddf5fc87dad5173766533fc88d88303d 100 SUPERFAMILY SSF48452 2 67 4.55E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_12260 b780999d026163007558b4d5ffbd18d1 221 Pfam PF14094 Domain of unknown function (DUF4272) 8 217 6.3E-69 T 14-10-2018 IPR025368 Protein of unknown function DUF4272 JO41_08990 00618d6fc7711e3e796e093b1710b6a4 107 SUPERFAMILY SSF118010 1 104 1.12E-22 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily JO41_08990 00618d6fc7711e3e796e093b1710b6a4 107 Pfam PF04327 Cysteine protease Prp 1 100 6.1E-20 T 14-10-2018 IPR007422 Cysteine protease Prp JO41_08990 00618d6fc7711e3e796e093b1710b6a4 107 Gene3D G3DSA:3.30.70.1490 1 107 3.0E-20 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily JO41_09900 252e69507222628d9bb398a7a0e1e9f7 416 Pfam PF03616 Sodium/glutamate symporter 7 378 2.1E-95 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO41_09900 252e69507222628d9bb398a7a0e1e9f7 416 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 6 410 20.754 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JO41_06505 d46fb8041c94e503127c78fceae75668 268 Pfam PF06738 Putative threonine/serine exporter 25 261 1.2E-62 T 14-10-2018 IPR010619 Putative threonine/serine exporter JO41_00740 f10d98ef4c167d975b56710ed1082a4b 161 Pfam PF13151 Protein of unknown function (DUF3990) 1 150 1.4E-47 T 14-10-2018 IPR025051 Protein of unknown function DUF3990 JO41_01525 fe5b85878c9a615951797ae552e745ed 362 Pfam PF01594 AI-2E family transporter 13 350 1.8E-37 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like JO41_06005 fb5e59f2459d9e16f523c3baf0e60904 130 SUPERFAMILY SSF54637 2 125 1.06E-41 T 14-10-2018 IPR029069 HotDog domain superfamily JO41_06005 fb5e59f2459d9e16f523c3baf0e60904 130 Gene3D G3DSA:3.10.129.10 1 130 1.5E-44 T 14-10-2018 JO41_06005 fb5e59f2459d9e16f523c3baf0e60904 130 PIRSF PIRSF014972 1 130 7.5E-43 T 14-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase JO41_08645 dceb24903b5f4f5d356ec9329a15fdc2 412 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 97 363 9.7E-76 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 JO41_08645 dceb24903b5f4f5d356ec9329a15fdc2 412 SUPERFAMILY SSF101960 107 371 3.27E-60 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JO41_08645 dceb24903b5f4f5d356ec9329a15fdc2 412 Pfam PF01458 Uncharacterized protein family (UPF0051) 120 345 6.0E-48 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JO41_11750 fd94a03679fab2931c795b8320cd3777 162 Pfam PF02674 Colicin V production protein 6 145 5.0E-26 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 JO41_04835 2205aba80309610bd08a6113504ba196 459 Pfam PF01554 MatE 267 409 3.1E-7 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_04835 2205aba80309610bd08a6113504ba196 459 Pfam PF01554 MatE 23 187 5.5E-30 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JO41_00635 3d89b4614ba559016dadbbb996f7ebd6 109 Pfam PF04723 Glycine reductase complex selenoprotein A 1 101 1.4E-51 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 JO41_00635 3d89b4614ba559016dadbbb996f7ebd6 109 PIRSF PIRSF000181 1 109 8.4E-51 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 JO41_05125 cb97e5c382714d34f479daee7594614a 333 Pfam PF03773 Predicted permease 7 323 1.5E-60 T 14-10-2018 IPR005524 Predicted permease DUF318 JO41_00225 e3e0dee65e533935ae063a64d2096937 88 Gene3D G3DSA:3.40.1690.10 5 86 8.6E-21 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JO41_00225 e3e0dee65e533935ae063a64d2096937 88 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 78 8.2E-18 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JO41_00225 e3e0dee65e533935ae063a64d2096937 88 SUPERFAMILY SSF160544 6 82 9.29E-20 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JO41_05870 edba220ab64209a9758840444c9c5c3b 114 Pfam PF06123 Inner membrane protein CreD 25 103 1.6E-15 T 14-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD JO41_10815 8a25f0a1c3215e151bc574b0ebb770dd 194 Gene3D G3DSA:1.20.120.1760 11 186 4.0E-5 T 14-10-2018 JO41_10815 8a25f0a1c3215e151bc574b0ebb770dd 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 56 78 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO41_10815 8a25f0a1c3215e151bc574b0ebb770dd 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 15 78 1.2E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JO41_00640 ca4ba591277ab0e31f1f5bcbec0a01f8 42 Pfam PF04723 Glycine reductase complex selenoprotein A 3 42 1.6E-17 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 JO41_09595 b317a49091d76233cba40c263ea96aa1 500 Pfam PF01973 Protein of unknown function DUF115 215 367 2.2E-26 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like JO41_06575 c33eafdea7f3cfaf16245b90b8b5dd1a 96 Pfam PF14751 Domain of unknown function (DUF4474) 7 74 1.1E-5 T 14-10-2018 IPR029322 Domain of unknown function DUF4474 JO41_05405 764040f86d1a299c1bbd4d8cccd84afe 141 Gene3D G3DSA:1.10.287.110 68 140 2.1E-6 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_05405 764040f86d1a299c1bbd4d8cccd84afe 141 SUPERFAMILY SSF46565 33 126 7.72E-9 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JO41_08380 7fa1c8f51b805795ab54f834af58c629 201 Pfam PF05565 Siphovirus Gp157 3 166 3.9E-23 T 14-10-2018 IPR008840 Siphovirus Gp157 JO41_07375 d31b43fb56842a831f0d0381bb22c433 282 SUPERFAMILY SSF52047 68 278 1.1E-12 T 14-10-2018 JO41_07375 d31b43fb56842a831f0d0381bb22c433 282 Gene3D G3DSA:3.80.10.10 25 281 4.1E-18 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JO41_09475 34db1f8972f785994ced88850946ed48 229 Pfam PF04347 Flagellar biosynthesis protein, FliO 94 177 2.4E-9 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 JO41_03075 6e30fb45ca939f48d1a3e3ed4c169854 338 Pfam PF13807 G-rich domain on putative tyrosine kinase 240 312 1.6E-7 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain JO41_08050 f59e23574050533c521955aa8446d13f 519 SUPERFAMILY SSF51735 2 296 1.4E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JO41_08050 f59e23574050533c521955aa8446d13f 519 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 164 3.3E-15 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JO41_01330 1cf5bf287aa98fb2e52c25d2cb89dfd0 139 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 139 2.9E-38 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JO41_01330 1cf5bf287aa98fb2e52c25d2cb89dfd0 139 PIRSF PIRSF002889 1 139 1.8E-21 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JO41_11110 dff43bab59a077f85c502baf93ec3628 158 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 153 5.0E-16 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related JO41_11110 dff43bab59a077f85c502baf93ec3628 158 Gene3D G3DSA:2.30.110.10 1 156 2.7E-42 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JO41_11110 dff43bab59a077f85c502baf93ec3628 158 SUPERFAMILY SSF50475 1 155 8.64E-43 T 14-10-2018 JO41_06520 cb76350243ead87515ca9f9ab929522c 345 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 2 345 1.2E-155 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO41_06520 cb76350243ead87515ca9f9ab929522c 345 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 3 345 1.6E-140 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO41_03515 f208a255a10f0ca154e29ec00ac60774 379 SUPERFAMILY SSF48452 106 204 9.01E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_03515 f208a255a10f0ca154e29ec00ac60774 379 Gene3D G3DSA:1.25.40.10 76 239 1.6E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JO41_05740 f3c81e176efa4a5384c9ca016a32d428 343 Pfam PF13303 Phosphotransferase system, EIIC 22 341 2.1E-107 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JO41_00450 b943a2a6470af1418479870dfad15fd8 724 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 92 667 3.8E-62 T 14-10-2018 IPR019934 Conserved hypothetical protein CHP03545 JO41_10685 276224f422e406124dfaa99edce2a938 274 Pfam PF02591 C4-type zinc ribbon domain 200 232 4.9E-12 T 14-10-2018 IPR003743 C4-type zinc ribbon domain JO41_02365 8ad4e4c774347a44b7dfdcf6c7b5a5e8 141 Pfam PF04519 Polymer-forming cytoskeletal 14 110 1.3E-22 T 14-10-2018 IPR007607 Bactofilin A/B JO41_02365 8ad4e4c774347a44b7dfdcf6c7b5a5e8 141 SUPERFAMILY SSF51161 10 108 1.61E-5 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JO41_09430 ec84756dd2e8d248549053fb66547da5 443 Pfam PF02120 Flagellar hook-length control protein FliK 318 396 6.4E-13 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal JO41_09430 ec84756dd2e8d248549053fb66547da5 443 Gene3D G3DSA:3.30.750.140 284 408 6.3E-9 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily JO41_08505 976d2ae491515ce4a4d010e2fcd060a0 473 Pfam PF03606 C4-dicarboxylate anaerobic carrier 44 469 4.3E-98 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 JO41_07660 f2fb53d066d22bcc9527aedcc40192b8 250 SMART SM00563 73 192 1.4E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO41_07660 f2fb53d066d22bcc9527aedcc40192b8 250 Pfam PF01553 Acyltransferase 71 185 3.0E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JO41_07660 f2fb53d066d22bcc9527aedcc40192b8 250 SUPERFAMILY SSF69593 25 244 7.72E-24 T 14-10-2018 JO41_03965 4424dcf76acc60acf8b639c42670aae7 522 Pfam PF09822 ABC-type uncharacterized transport system 40 302 3.1E-36 T 14-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 JO41_02375 29ef7f06e670262d0d74c7aa8bc4a1a7 307 Pfam PF04468 PSP1 C-terminal conserved region 98 181 1.1E-22 T 14-10-2018 IPR007557 PSP1, C-terminal JO41_11320 081101d91ae72de8327876b7d9a6568c 226 Pfam PF16258 Domain of unknown function (DUF4912) 82 190 3.3E-15 T 14-10-2018 IPR032585 Protein of unknown function DUF4912 JO41_08975 31b4016261d16edd2853a9067d9ddec5 353 Gene3D G3DSA:1.10.1760.20 2 160 3.0E-8 T 14-10-2018 JO41_08975 31b4016261d16edd2853a9067d9ddec5 353 Pfam PF07456 Heptaprenyl diphosphate synthase component I 13 154 2.8E-34 T 14-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I JO41_00745 4c33904be1b2e1f80afc3d51c613d9d6 70 Pfam PF12668 Protein of unknown function (DUF3791) 15 64 1.2E-6 T 14-10-2018 IPR024269 Protein of unknown function DUF3791 JO41_09435 7291c66d0e303fbdd8afc4dfaf0a8599 159 Pfam PF03963 Flagellar hook capping protein - N-terminal region 43 97 6.0E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein JO41_06330 75fc92f1ffdf3c4c92701fdb27aad82d 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 304 2.7E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_11230 01866daeb095ec88ac0b402b04181d5a 223 Pfam PF14353 CpXC protein 4 133 4.0E-22 T 14-10-2018 IPR025682 CpXC domain JO41_04320 7a7c0e3f275954ef812029c561330763 132 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 86 6.2E-20 T 14-10-2018 JO41_08885 fb3a60adaa45d50cb192524cdd8c5323 174 Pfam PF10135 Rod binding protein 121 169 3.3E-11 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal JO41_03010 273222da62312d789dce6773ce967d9c 478 Pfam PF00474 Sodium:solute symporter family 33 426 1.2E-48 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JO41_03010 273222da62312d789dce6773ce967d9c 478 Gene3D G3DSA:1.20.1730.10 4 476 2.0E-89 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JO41_05955 e8d082c9d434a5d3452fe22bb8f6041c 307 Pfam PF13349 Putative adhesin 77 263 2.2E-16 T 14-10-2018 IPR025164 Putative adhesin JO41_10725 1e6ee25b7e5b6dc5821914b9f12ca34a 229 Pfam PF10719 Late competence development protein ComFB 4 91 4.8E-17 T 14-10-2018 IPR019657 Late competence development protein ComFB JO41_06225 de89917a6f8647860a4e41f0d6c57a12 85 Gene3D G3DSA:1.20.1280.290 7 85 2.7E-7 T 14-10-2018 JO41_06225 de89917a6f8647860a4e41f0d6c57a12 85 Pfam PF03083 Sugar efflux transporter for intercellular exchange 8 82 9.8E-8 T 14-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 JO41_07195 1fb78a952ae8b137f3b1b050da7180d8 226 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 12 222 9.6E-53 T 14-10-2018 IPR006214 Bax inhibitor 1-related JO41_02530 7f44c1558c8c75dfb0fb2afc36d1352f 120 Pfam PF11756 Nitrous oxide-stimulated promoter 6 118 4.4E-34 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA JO41_02530 7f44c1558c8c75dfb0fb2afc36d1352f 120 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 107 2.0E-21 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA JO41_00430 a6fefe1adfb417203736916023c0c6c0 516 Pfam PF03806 AbgT putative transporter family 12 513 3.5E-184 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 JO41_11185 96d15bb28116073bf257b226628abdcb 245 Pfam PF10895 Domain of unknown function (DUF2715) 33 245 1.8E-6 T 14-10-2018 IPR024471 Protein of unknown function DUF2715 JO41_05585 b421786c963dada81806826517f12306 1247 Pfam PF09823 Domain of unknown function (DUF2357) 82 213 9.8E-10 T 14-10-2018 IPR018633 Domain of unknown function DUF2357 JO41_07885 fc77e1b5a122a12996a212d4c0f648f6 371 SUPERFAMILY SSF53850 51 349 1.13E-8 T 14-10-2018 JO41_06325 9f878a75bab88edf1e8d36402e98b435 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 309 2.3E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_00315 1dfb19bd9ac3b48c4f1853034f115cdd 540 Pfam PF09820 Predicted AAA-ATPase 8 295 2.0E-96 T 14-10-2018 IPR018631 AAA-ATPase-like domain JO41_00315 1dfb19bd9ac3b48c4f1853034f115cdd 540 Pfam PF08011 PD-(D/E)XK nuclease superfamily 442 535 8.3E-23 T 14-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 JO41_09135 b5c058dafc63e13f271aea71c9b78d14 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 328 1.1E-18 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_01660 723a4e61bdf9b76574b342d8daf801a3 95 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 31 92 1.1E-17 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JO41_04870 5f9a69213cad292ecc17444825c5a361 111 Pfam PF13707 RloB-like protein 15 111 1.2E-16 T 14-10-2018 IPR025591 RloB-like protein JO41_07845 9b1b9d414964426d0c9d4f239ecbedc1 292 Pfam PF14080 Domain of unknown function (DUF4261) 200 280 8.3E-24 T 14-10-2018 IPR025357 Domain of unknown function DUF4261 JO41_03815 8bb805e7015b45d0262467ff44d8bebf 454 SUPERFAMILY SSF111283 24 452 4.05E-63 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JO41_03815 8bb805e7015b45d0262467ff44d8bebf 454 Pfam PF01523 Putative modulator of DNA gyrase 36 312 5.0E-24 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JO41_06425 83e0cc597955d77bbb9d5cc1c63018b2 295 Pfam PF04754 Putative transposase, YhgA-like 13 148 6.3E-6 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like JO41_06580 c0dda8162c365c961bc01f14e26cc463 170 Pfam PF17117 Domain of unknown function (DUF5104) 39 141 6.8E-10 T 14-10-2018 IPR031344 Protein of unknown function DUF5104 JO41_05205 02d40daa6208d1b84c398032c682f64d 89 Pfam PF11823 Protein of unknown function (DUF3343) 5 55 1.4E-12 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 JO41_04175 617da8dba67aaa56d107a409a2ee3d2c 171 Pfam PF03729 Short repeat of unknown function (DUF308) 125 169 5.8E-7 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane JO41_04175 617da8dba67aaa56d107a409a2ee3d2c 171 Pfam PF03729 Short repeat of unknown function (DUF308) 67 138 8.2E-12 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane JO41_04175 617da8dba67aaa56d107a409a2ee3d2c 171 Pfam PF03729 Short repeat of unknown function (DUF308) 11 59 8.7E-12 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane JO41_09395 0e182cfd0c08ca155a83733468364519 275 Pfam PF02517 CAAX protease self-immunity 124 230 5.5E-11 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO41_12130 78c4b59b62c82fb423d42d45c81b49c3 382 Gene3D G3DSA:2.20.28.30 95 135 5.4E-7 T 14-10-2018 JO41_04115 21dc075524283aa352ef181f2f8c4ac3 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 335 1.3E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_04630 4397926a3bba657dacde58bbd95f3a72 213 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 31 195 1.5E-7 T 14-10-2018 IPR019016 CRISPR-associated DxTHG protein JO41_11555 576dd3d6bd2242a0fe1cf0095115a322 128 Pfam PF14387 Domain of unknown function (DUF4418) 11 123 1.4E-28 T 14-10-2018 IPR025531 Protein of unknown function DUF4418 JO41_04520 b203a1f73add13647f26fc74941f1c0e 269 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 15.934 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JO41_04520 b203a1f73add13647f26fc74941f1c0e 269 Pfam PF02673 Bacitracin resistance protein BacA 6 259 8.9E-67 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JO41_01355 d51ae75bf130d888040519e34f510770 312 Pfam PF02108 Flagellar assembly protein FliH 161 288 8.8E-25 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JO41_11520 7d08e86107b5206c89a7f836cdae8bde 65 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 2 47 2.9E-14 T 14-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB JO41_11640 54cb01acba0b717a63befb74f766c8e4 238 Pfam PF02361 Cobalt transport protein 6 196 1.2E-16 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO41_08555 e73ae1a9401f11b875b9d9bd0fea6ae8 349 Gene3D G3DSA:2.30.30.40 45 127 4.8E-5 T 14-10-2018 JO41_03260 14a10343ac41774bf3fc91ff68e650df 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 333 8.3E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JO41_06525 100e659c5bbf7ef51c9cbf67a117f285 74 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 1 74 1.3E-30 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 JO41_09760 7ad142b4f2ea63f9576a7fb7c90471ab 276 Pfam PF02517 CAAX protease self-immunity 127 233 3.0E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JO41_10345 19e3d193aa3cfe3504f4e3b502e49bde 221 Pfam PF02361 Cobalt transport protein 2 187 4.4E-8 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO41_06115 878e7d9e775c0c8ca6fbfe28cc238cd1 201 Gene3D G3DSA:3.40.50.1820 2 199 1.0E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_06115 878e7d9e775c0c8ca6fbfe28cc238cd1 201 SUPERFAMILY SSF53474 4 200 2.59E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JO41_05310 23b43798264103a3e0e0ced4098852f3 297 Gene3D G3DSA:3.40.91.70 1 224 6.6E-86 T 14-10-2018 IPR038373 Restriction endonuclease, type II, HindIII superfamily JO41_05310 23b43798264103a3e0e0ced4098852f3 297 Pfam PF09518 HindIII restriction endonuclease 19 284 1.3E-68 T 14-10-2018 IPR019043 Restriction endonuclease, type II, HindIII JO41_00705 64946a44e47c29c01cc4e07996b3106b 267 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 12 223 1.6E-61 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 JO41_09445 92e274ae81fdbdb604f213e28e0e544a 65 Pfam PF06289 Flagellar protein (FlbD) 1 58 8.5E-21 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like JO41_06205 001cc4163d7874d22c0038a52f89c64e 92 Pfam PF13783 Domain of unknown function (DUF4177) 28 85 6.3E-6 T 14-10-2018 IPR025234 Protein of unknown function DUF4177 JO41_10055 4947b9a86ec34c0133ed7b1253b35c4c 299 Pfam PF14257 Domain of unknown function (DUF4349) 22 288 1.2E-63 T 14-10-2018 IPR025645 Domain of unknown function DUF4349 JO41_02545 4e8e610c7b39582f68e4bbc9ce158963 64 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 45 1.9E-12 T 14-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB JO41_01910 426b3558b6ea690a16133afc70f15352 113 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 42 111 2.1E-19 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JO41_05020 6232ff0fbc3962a72cbfce082c1faeea 592 Pfam PF05262 Borrelia P83/100 protein 289 563 3.5E-52 T 14-10-2018 IPR007926 Borrelia P83100 JO41_05020 6232ff0fbc3962a72cbfce082c1faeea 592 Pfam PF05262 Borrelia P83/100 protein 29 368 6.0E-109 T 14-10-2018 IPR007926 Borrelia P83100 JO41_12530 ab6f333c43974c34d45990cc24a31563 485 Pfam PF08308 PEGA domain 249 312 3.5E-7 T 14-10-2018 IPR013229 PEGA JO41_05550 49bac04ce9e761fed120e0c33f358fb5 156 SUPERFAMILY SSF53300 4 118 8.9E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JO41_04955 b0d43c993d3ebf01f4c48242e53163b1 236 Pfam PF02361 Cobalt transport protein 3 201 5.5E-14 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JO41_10855 ec25bd929999e973b18a547d5cc35ba6 733 Pfam PF03961 Flagellar Assembly Protein A 290 716 1.6E-59 T 14-10-2018 IPR005646 Flagellar assembly protein A JO41_07255 37320b3dbe061f22f04d5c10027f5464 398 Pfam PF00263 Bacterial type II and III secretion system protein 214 372 3.3E-29 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 JO41_00375 978607d3f34225d3d758d3e002668b99 214 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 64 208 4.6E-26 T 14-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase JO41_09215 e4b476df51108e90ea3148342e284582 245 Pfam PF04620 Flagellar filament outer layer protein Flaa 28 219 1.3E-43 T 14-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973