locus-tag class description E4N72_00005 PF00308 Bacterial dnaA protein E4N72_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4N72_00005 PF11638 DnaA N-terminal domain E4N72_00030 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_00045 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_00050 PF00005 ABC transporter E4N72_00050 PF08402 TOBE domain E4N72_00060 PF02446 4-alpha-glucanotransferase E4N72_00070 PF00011 Hsp20/alpha crystallin family E4N72_00075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4N72_00075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4N72_00080 PF00258 Flavodoxin E4N72_00095 PF13185 GAF domain E4N72_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4N72_00110 PF00005 ABC transporter E4N72_00115 PF00005 ABC transporter E4N72_00115 PF02687 FtsX-like permease family E4N72_00115 PF12704 MacB-like periplasmic core domain E4N72_00120 PF12704 MacB-like periplasmic core domain E4N72_00120 PF02687 FtsX-like permease family E4N72_00120 PF00005 ABC transporter E4N72_00140 PF00291 Pyridoxal-phosphate dependent enzyme E4N72_00140 PF14821 Threonine synthase N terminus E4N72_00155 PF01256 Carbohydrate kinase E4N72_00155 PF03853 YjeF-related protein N-terminus E4N72_00165 PF00365 Phosphofructokinase E4N72_00170 PF00571 CBS domain E4N72_00170 PF00478 IMP dehydrogenase / GMP reductase domain E4N72_00185 PF00588 SpoU rRNA Methylase family E4N72_00190 PF00158 Sigma-54 interaction domain E4N72_00190 PF02954 Bacterial regulatory protein, Fis family E4N72_00190 PF00072 Response regulator receiver domain E4N72_00205 PF08439 Oligopeptidase F E4N72_00205 PF01432 Peptidase family M3 E4N72_00215 PF01165 Ribosomal protein S21 E4N72_00220 PF00753 Metallo-beta-lactamase superfamily E4N72_00225 PF00144 Beta-lactamase E4N72_00240 PF00919 Uncharacterized protein family UPF0004 E4N72_00240 PF04055 Radical SAM superfamily E4N72_00240 PF01938 TRAM domain E4N72_00245 PF07943 Penicillin-binding protein 5, C-terminal domain E4N72_00245 PF00768 D-alanyl-D-alanine carboxypeptidase E4N72_00250 PF01551 Peptidase family M23 E4N72_00260 PF01066 CDP-alcohol phosphatidyltransferase E4N72_00265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4N72_00265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4N72_00290 PF09285 Elongation factor P, C-terminal E4N72_00290 PF08207 Elongation factor P (EF-P) KOW-like domain E4N72_00290 PF01132 Elongation factor P (EF-P) OB domain E4N72_00310 PF02463 RecF/RecN/SMC N terminal domain E4N72_00315 PF02767 DNA polymerase III beta subunit, central domain E4N72_00315 PF02768 DNA polymerase III beta subunit, C-terminal domain E4N72_00315 PF00712 DNA polymerase III beta subunit, N-terminal domain E4N72_00320 PF03102 NeuB family E4N72_00320 PF08666 SAF domain E4N72_00410 PF03553 Na+/H+ antiporter family E4N72_00415 PF00817 impB/mucB/samB family E4N72_00415 PF11799 impB/mucB/samB family C-terminal domain E4N72_00415 PF11798 IMS family HHH motif E4N72_00425 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system E4N72_00460 PF17932 Tetracyclin repressor-like, C-terminal domain E4N72_00460 PF00440 Bacterial regulatory proteins, tetR family E4N72_00495 PF03575 Peptidase family S51 E4N72_00505 PF08241 Methyltransferase domain E4N72_00515 PF17922 Tetracyclin repressor-like, C-terminal domain E4N72_00515 PF00440 Bacterial regulatory proteins, tetR family E4N72_00540 PF13173 AAA domain E4N72_00540 PF13635 Domain of unknown function (DUF4143) E4N72_00595 PF07730 Histidine kinase E4N72_00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N72_00595 PF00672 HAMP domain E4N72_00635 PF18766 SWI2/SNF2 ATPase E4N72_00635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4N72_00635 PF11867 Domain of unknown function (DUF3387) E4N72_00660 PF02384 N-6 DNA Methylase E4N72_00665 PF00255 Glutathione peroxidase E4N72_00670 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N72_00675 PF01522 Polysaccharide deacetylase E4N72_00685 PF02801 Beta-ketoacyl synthase, C-terminal domain E4N72_00685 PF00109 Beta-ketoacyl synthase, N-terminal domain E4N72_00700 PF00109 Beta-ketoacyl synthase, N-terminal domain E4N72_00700 PF02801 Beta-ketoacyl synthase, C-terminal domain E4N72_00725 PF00221 Aromatic amino acid lyase E4N72_00730 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ E4N72_00750 PF00501 AMP-binding enzyme E4N72_00750 PF13193 AMP-binding enzyme C-terminal domain E4N72_00755 PF00550 Phosphopantetheine attachment site E4N72_00760 PF00550 Phosphopantetheine attachment site E4N72_00765 PF13193 AMP-binding enzyme C-terminal domain E4N72_00765 PF00501 AMP-binding enzyme E4N72_00765 PF01553 Acyltransferase E4N72_00805 PF02681 Divergent PAP2 family E4N72_00815 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4N72_00815 PF13237 4Fe-4S dicluster domain E4N72_00815 PF13375 RnfC Barrel sandwich hybrid domain E4N72_00815 PF10531 SLBB domain E4N72_00840 PF13505 Outer membrane protein beta-barrel domain E4N72_00850 PF16193 AAA C-terminal domain E4N72_00850 PF12002 MgsA AAA+ ATPase C terminal E4N72_00850 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_00870 PF13732 Domain of unknown function (DUF4162) E4N72_00870 PF00005 ABC transporter E4N72_00875 PF00881 Nitroreductase family E4N72_00885 PF01592 NifU-like N terminal domain E4N72_00895 PF16325 Peptidase family U32 C-terminal domain E4N72_00895 PF01136 Peptidase family U32 E4N72_00900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4N72_00900 PF03484 tRNA synthetase B5 domain E4N72_00920 PF03143 Elongation factor Tu C-terminal domain E4N72_00920 PF03144 Elongation factor Tu domain 2 E4N72_00920 PF00009 Elongation factor Tu GTP binding domain E4N72_00925 PF00338 Ribosomal protein S10p/S20e E4N72_00930 PF00297 Ribosomal protein L3 E4N72_00935 PF00573 Ribosomal protein L4/L1 family E4N72_00940 PF00276 Ribosomal protein L23 E4N72_00945 PF03947 Ribosomal Proteins L2, C-terminal domain E4N72_00945 PF00181 Ribosomal Proteins L2, RNA binding domain E4N72_00950 PF00203 Ribosomal protein S19 E4N72_00955 PF00237 Ribosomal protein L22p/L17e E4N72_00960 PF07650 KH domain E4N72_00960 PF00189 Ribosomal protein S3, C-terminal domain E4N72_00965 PF00252 Ribosomal protein L16p/L10e E4N72_00970 PF00831 Ribosomal L29 protein E4N72_00975 PF00366 Ribosomal protein S17 E4N72_00980 PF00238 Ribosomal protein L14p/L23e E4N72_00985 PF00467 KOW motif E4N72_00985 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4N72_00990 PF00281 Ribosomal protein L5 E4N72_00990 PF00673 ribosomal L5P family C-terminus E4N72_00995 PF00253 Ribosomal protein S14p/S29e E4N72_01000 PF00410 Ribosomal protein S8 E4N72_01005 PF00347 Ribosomal protein L6 E4N72_01010 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4N72_01015 PF00333 Ribosomal protein S5, N-terminal domain E4N72_01015 PF03719 Ribosomal protein S5, C-terminal domain E4N72_01020 PF00327 Ribosomal protein L30p/L7e E4N72_01025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4N72_01030 PF00344 SecY translocase E4N72_01035 PF00444 Ribosomal protein L36 E4N72_01040 PF00416 Ribosomal protein S13/S18 E4N72_01045 PF00411 Ribosomal protein S11 E4N72_01050 PF01000 RNA polymerase Rpb3/RpoA insert domain E4N72_01050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4N72_01050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4N72_01055 PF01196 Ribosomal protein L17 E4N72_01070 PF03448 MgtE intracellular N domain E4N72_01070 PF00571 CBS domain E4N72_01070 PF01769 Divalent cation transporter E4N72_01090 PF00860 Permease family E4N72_01110 PF00933 Glycosyl hydrolase family 3 N terminal domain E4N72_01115 PF02436 Conserved carboxylase domain E4N72_01115 PF00682 HMGL-like E4N72_01115 PF00364 Biotin-requiring enzyme E4N72_01120 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N72_01120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4N72_01125 PF00175 Oxidoreductase NAD-binding domain E4N72_01125 PF00970 Oxidoreductase FAD-binding domain E4N72_01125 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4N72_01130 PF08668 HDOD domain E4N72_01135 PF00005 ABC transporter E4N72_01150 PF03063 Prismane/CO dehydrogenase family E4N72_01155 PF00118 TCP-1/cpn60 chaperonin family E4N72_01160 PF01235 Sodium:alanine symporter family E4N72_01165 PF00501 AMP-binding enzyme E4N72_01170 PF00521 DNA gyrase/topoisomerase IV, subunit A E4N72_01175 PF00356 Bacterial regulatory proteins, lacI family E4N72_01190 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_01195 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_01200 PF00703 Glycosyl hydrolases family 2 E4N72_01200 PF16353 Domain of unknown function(DUF4981) E4N72_01200 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4N72_01200 PF02929 Beta galactosidase small chain E4N72_01200 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4N72_01210 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_01215 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_01220 PF01547 Bacterial extracellular solute-binding protein E4N72_01225 PF07687 Peptidase dimerisation domain E4N72_01225 PF01546 Peptidase family M20/M25/M40 E4N72_01230 PF00271 Helicase conserved C-terminal domain E4N72_01230 PF12300 ATP-dependent RNA helicase RhlB E4N72_01230 PF00270 DEAD/DEAH box helicase E4N72_01235 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N72_01240 PF00595 PDZ domain E4N72_01245 PF09383 NIL domain E4N72_01245 PF00005 ABC transporter E4N72_01250 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_01255 PF04055 Radical SAM superfamily E4N72_01255 PF06969 HemN C-terminal domain E4N72_01260 PF10502 Signal peptidase, peptidase S26 E4N72_01265 PF01668 SmpB protein E4N72_01275 PF06733 DEAD_2 E4N72_01275 PF13307 Helicase C-terminal domain E4N72_01285 PF13361 UvrD-like helicase C-terminal domain E4N72_01285 PF00580 UvrD/REP helicase N-terminal domain E4N72_01345 PF02229 Transcriptional Coactivator p15 (PC4) E4N72_01350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_01350 PF00672 HAMP domain E4N72_01350 PF12729 Four helix bundle sensory module for signal transduction E4N72_01365 PF01546 Peptidase family M20/M25/M40 E4N72_01365 PF07687 Peptidase dimerisation domain E4N72_01370 PF08011 PD-(D/E)XK nuclease superfamily E4N72_01370 PF09820 Predicted AAA-ATPase E4N72_01380 PF00704 Glycosyl hydrolases family 18 E4N72_01380 PF00041 Fibronectin type III domain E4N72_01385 PF00072 Response regulator receiver domain E4N72_01390 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4N72_01395 PF05164 Cell division protein ZapA E4N72_01405 PF00453 Ribosomal protein L20 E4N72_01410 PF01632 Ribosomal protein L35 E4N72_01415 PF00707 Translation initiation factor IF-3, C-terminal domain E4N72_01415 PF05198 Translation initiation factor IF-3, N-terminal domain E4N72_01425 PF00271 Helicase conserved C-terminal domain E4N72_01425 PF00270 DEAD/DEAH box helicase E4N72_01430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4N72_01430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4N72_01435 PF00698 Acyl transferase domain E4N72_01445 PF02801 Beta-ketoacyl synthase, C-terminal domain E4N72_01445 PF00109 Beta-ketoacyl synthase, N-terminal domain E4N72_01450 PF07977 FabA-like domain E4N72_01455 PF01297 Zinc-uptake complex component A periplasmic E4N72_01470 PF03023 Lipid II flippase MurJ E4N72_01475 PF01409 tRNA synthetases class II core domain (F) E4N72_01485 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4N72_01500 PF01713 Smr domain E4N72_01500 PF00488 MutS domain V E4N72_01510 PF02772 S-adenosylmethionine synthetase, central domain E4N72_01510 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4N72_01510 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4N72_01515 PF00209 Sodium:neurotransmitter symporter family E4N72_01520 PF01212 Beta-eliminating lyase E4N72_01525 PF00672 HAMP domain E4N72_01525 PF02743 Cache domain E4N72_01525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_01530 PF00588 SpoU rRNA Methylase family E4N72_01530 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4N72_01545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4N72_01555 PF13478 XdhC Rossmann domain E4N72_01555 PF02625 XdhC and CoxI family E4N72_01560 PF02446 4-alpha-glucanotransferase E4N72_01565 PF16363 GDP-mannose 4,6 dehydratase E4N72_01625 PF04024 PspC domain E4N72_01635 PF03551 Transcriptional regulator PadR-like family E4N72_01650 PF01791 DeoC/LacD family aldolase E4N72_01655 PF00962 Adenosine/AMP deaminase E4N72_01660 PF13932 GidA associated domain E4N72_01660 PF01134 Glucose inhibited division protein A E4N72_01670 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4N72_01670 PF17864 RuvB AAA lid domain E4N72_01670 PF05491 RuvB C-terminal winged helix domain E4N72_01675 PF02743 Cache domain E4N72_01675 PF00672 HAMP domain E4N72_01675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_01680 PF02609 Exonuclease VII small subunit E4N72_01685 PF01119 DNA mismatch repair protein, C-terminal domain E4N72_01685 PF08676 MutL C terminal dimerisation domain E4N72_01690 PF05872 Bacterial protein of unknown function (DUF853) E4N72_01700 PF04542 Sigma-70 region 2 E4N72_01700 PF04539 Sigma-70 region 3 E4N72_01700 PF04545 Sigma-70, region 4 E4N72_01735 PF00171 Aldehyde dehydrogenase family E4N72_01740 PF01614 Bacterial transcriptional regulator E4N72_01740 PF09339 IclR helix-turn-helix domain E4N72_01745 PF00849 RNA pseudouridylate synthase E4N72_01745 PF01479 S4 domain E4N72_01760 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4N72_01760 PF00578 AhpC/TSA family E4N72_01770 PF01743 Poly A polymerase head domain E4N72_01770 PF12627 Probable RNA and SrmB- binding site of polymerase A E4N72_01770 PF13735 tRNA nucleotidyltransferase domain 2 putative E4N72_01780 PF01613 Flavin reductase like domain E4N72_01785 PF10415 Fumarase C C-terminus E4N72_01785 PF00206 Lyase E4N72_01790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4N72_01805 PF01081 KDPG and KHG aldolase E4N72_01810 PF00654 Voltage gated chloride channel E4N72_01815 PF00860 Permease family E4N72_01820 PF00860 Permease family E4N72_01830 PF12804 MobA-like NTP transferase domain E4N72_01835 PF02653 Branched-chain amino acid transport system / permease component E4N72_01840 PF02653 Branched-chain amino acid transport system / permease component E4N72_01845 PF00005 ABC transporter E4N72_01850 PF02608 ABC transporter substrate-binding protein PnrA-like E4N72_01855 PF00708 Acylphosphatase E4N72_01865 PF08543 Phosphomethylpyrimidine kinase E4N72_01870 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4N72_01870 PF00591 Glycosyl transferase family, a/b domain E4N72_01870 PF02885 Glycosyl transferase family, helical bundle domain E4N72_01875 PF02272 DHHA1 domain E4N72_01875 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4N72_01875 PF17768 RecJ OB domain E4N72_01875 PF01368 DHH family E4N72_01880 PF07687 Peptidase dimerisation domain E4N72_01880 PF01546 Peptidase family M20/M25/M40 E4N72_01885 PF00571 CBS domain E4N72_01885 PF03471 Transporter associated domain E4N72_01890 PF00571 CBS domain E4N72_01890 PF03471 Transporter associated domain E4N72_01890 PF01595 Cyclin M transmembrane N-terminal domain E4N72_01895 PF00288 GHMP kinases N terminal domain E4N72_01895 PF08544 GHMP kinases C terminal E4N72_01895 PF10509 Galactokinase galactose-binding signature E4N72_01900 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4N72_01900 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4N72_01900 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4N72_01900 PF10371 Domain of unknown function E4N72_01900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4N72_01950 PF13276 HTH-like domain E4N72_01950 PF13333 Integrase core domain E4N72_01950 PF00665 Integrase core domain E4N72_01985 PF01161 Phosphatidylethanolamine-binding protein E4N72_01995 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_01995 PF10431 C-terminal, D2-small domain, of ClpB protein E4N72_01995 PF07724 AAA domain (Cdc48 subfamily) E4N72_01995 PF17871 AAA lid domain E4N72_01995 PF02861 Clp amino terminal domain, pathogenicity island component E4N72_02005 PF02386 Cation transport protein E4N72_02010 PF03746 LamB/YcsF family E4N72_02020 PF02682 Carboxyltransferase domain, subdomain C and D E4N72_02025 PF02626 Carboxyltransferase domain, subdomain A and B E4N72_02035 PF01025 GrpE E4N72_02040 PF00012 Hsp70 protein E4N72_02045 PF01556 DnaJ C terminal domain E4N72_02045 PF00684 DnaJ central domain E4N72_02045 PF00226 DnaJ domain E4N72_02075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4N72_02075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4N72_02080 PF00270 DEAD/DEAH box helicase E4N72_02080 PF00271 Helicase conserved C-terminal domain E4N72_02085 PF02559 CarD-like/TRCF domain E4N72_02085 PF00270 DEAD/DEAH box helicase E4N72_02085 PF00271 Helicase conserved C-terminal domain E4N72_02085 PF03461 TRCF domain E4N72_02085 PF17757 UvrB interaction domain E4N72_02090 PF00027 Cyclic nucleotide-binding domain E4N72_02090 PF13545 Crp-like helix-turn-helix domain E4N72_02100 PF02811 PHP domain E4N72_02105 PF01027 Inhibitor of apoptosis-promoting Bax1 E4N72_02120 PF02503 Polyphosphate kinase middle domain E4N72_02120 PF13090 Polyphosphate kinase C-terminal domain 2 E4N72_02120 PF17941 Polyphosphate kinase C-terminal domain 1 E4N72_02120 PF13089 Polyphosphate kinase N-terminal domain E4N72_02125 PF01204 Trehalase E4N72_02130 PF02637 GatB domain E4N72_02130 PF02934 GatB/GatE catalytic domain E4N72_02160 PF02896 PEP-utilising enzyme, TIM barrel domain E4N72_02160 PF00391 PEP-utilising enzyme, mobile domain E4N72_02160 PF05524 PEP-utilising enzyme, N-terminal E4N72_02165 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E4N72_02165 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4N72_02170 PF03390 2-hydroxycarboxylate transporter family E4N72_02175 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E4N72_02180 PF04223 Citrate lyase, alpha subunit (CitF) E4N72_02185 PF03328 HpcH/HpaI aldolase/citrate lyase family E4N72_02190 PF06857 Malonate decarboxylase delta subunit (MdcD) E4N72_02195 PF08218 Citrate lyase ligase C-terminal domain E4N72_02210 PF13416 Bacterial extracellular solute-binding protein E4N72_02215 PF00595 PDZ domain E4N72_02215 PF03572 Peptidase family S41 E4N72_02220 PF04452 RNA methyltransferase E4N72_02230 PF01636 Phosphotransferase enzyme family E4N72_02235 PF07075 Protein of unknown function (DUF1343) E4N72_02240 PF09820 Predicted AAA-ATPase E4N72_02240 PF08011 PD-(D/E)XK nuclease superfamily E4N72_02260 PF00468 Ribosomal protein L34 E4N72_02270 PF01809 Putative membrane protein insertion efficiency factor E4N72_02275 PF02096 60Kd inner membrane protein E4N72_02275 PF14849 YidC periplasmic domain E4N72_02280 PF14804 Jag N-terminus E4N72_02280 PF01424 R3H domain E4N72_02290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4N72_02295 PF02699 Preprotein translocase subunit E4N72_02300 PF02355 Protein export membrane protein E4N72_02305 PF02355 Protein export membrane protein E4N72_02320 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4N72_02325 PF00753 Metallo-beta-lactamase superfamily E4N72_02330 PF00375 Sodium:dicarboxylate symporter family E4N72_02335 PF02887 Pyruvate kinase, alpha/beta domain E4N72_02335 PF00224 Pyruvate kinase, barrel domain E4N72_02335 PF00391 PEP-utilising enzyme, mobile domain E4N72_02350 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain E4N72_02350 PF09297 NADH pyrophosphatase zinc ribbon domain E4N72_02350 PF00293 NUDIX domain E4N72_02360 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4N72_02365 PF01921 tRNA synthetases class I (K) E4N72_02380 PF00209 Sodium:neurotransmitter symporter family E4N72_02385 PF00579 tRNA synthetases class I (W and Y) E4N72_02395 PF01048 Phosphorylase superfamily E4N72_02400 PF00849 RNA pseudouridylate synthase E4N72_02400 PF01479 S4 domain E4N72_02405 PF00300 Histidine phosphatase superfamily (branch 1) E4N72_02425 PF02511 Thymidylate synthase complementing protein E4N72_02430 PF04545 Sigma-70, region 4 E4N72_02430 PF04539 Sigma-70 region 3 E4N72_02430 PF04542 Sigma-70 region 2 E4N72_02430 PF03979 Sigma-70 factor, region 1.1 E4N72_02430 PF00140 Sigma-70 factor, region 1.2 E4N72_02435 PF00166 Chaperonin 10 Kd subunit E4N72_02450 PF00579 tRNA synthetases class I (W and Y) E4N72_02455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4N72_02455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4N72_02460 PF13742 OB-fold nucleic acid binding domain E4N72_02460 PF02601 Exonuclease VII, large subunit E4N72_02470 PF01264 Chorismate synthase E4N72_02495 PF00730 HhH-GPD superfamily base excision DNA repair protein E4N72_02510 PF01554 MatE E4N72_02520 PF08245 Mur ligase middle domain E4N72_02520 PF02875 Mur ligase family, glutamate ligase domain E4N72_02520 PF01225 Mur ligase family, catalytic domain E4N72_02540 PF01497 Periplasmic binding protein E4N72_02545 PF03459 TOBE domain E4N72_02555 PF02608 ABC transporter substrate-binding protein PnrA-like E4N72_02560 PF00005 ABC transporter E4N72_02570 PF02653 Branched-chain amino acid transport system / permease component E4N72_02575 PF01156 Inosine-uridine preferring nucleoside hydrolase E4N72_02580 PF00294 pfkB family carbohydrate kinase E4N72_02585 PF00356 Bacterial regulatory proteins, lacI family E4N72_02590 PF02554 Carbon starvation protein CstA E4N72_02595 PF07478 D-ala D-ala ligase C-terminus E4N72_02595 PF01820 D-ala D-ala ligase N-terminus E4N72_02605 PF07238 PilZ domain E4N72_02610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N72_02610 PF02403 Seryl-tRNA synthetase N-terminal domain E4N72_02615 PF02901 Pyruvate formate lyase-like E4N72_02615 PF01228 Glycine radical E4N72_02620 PF04055 Radical SAM superfamily E4N72_02630 PF00871 Acetokinase family E4N72_02635 PF02653 Branched-chain amino acid transport system / permease component E4N72_02640 PF02653 Branched-chain amino acid transport system / permease component E4N72_02645 PF00005 ABC transporter E4N72_02650 PF02608 ABC transporter substrate-binding protein PnrA-like E4N72_02655 PF00266 Aminotransferase class-V E4N72_02670 PF00586 AIR synthase related protein, N-terminal domain E4N72_02670 PF02769 AIR synthase related protein, C-terminal domain E4N72_02675 PF03030 Inorganic H+ pyrophosphatase E4N72_02735 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4N72_02735 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4N72_02735 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4N72_02740 PF13476 AAA domain E4N72_02745 PF00149 Calcineurin-like phosphoesterase E4N72_02745 PF12320 Type 5 capsule protein repressor C-terminal domain E4N72_02750 PF08359 YsiA-like protein, C-terminal region E4N72_02750 PF00440 Bacterial regulatory proteins, tetR family E4N72_02755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4N72_02755 PF00391 PEP-utilising enzyme, mobile domain E4N72_02760 PF01554 MatE E4N72_02765 PF00133 tRNA synthetases class I (I, L, M and V) E4N72_02765 PF08264 Anticodon-binding domain of tRNA E4N72_02780 PF01381 Helix-turn-helix E4N72_02780 PF06114 IrrE N-terminal-like domain E4N72_02780 PF09856 Predicted transcriptional regulator (DUF2083) E4N72_02800 PF00483 Nucleotidyl transferase E4N72_02805 PF02576 RimP N-terminal domain E4N72_02805 PF17384 RimP C-terminal SH3 domain E4N72_02810 PF00575 S1 RNA binding domain E4N72_02810 PF13184 NusA-like KH domain E4N72_02810 PF08529 NusA N-terminal domain E4N72_02815 PF00009 Elongation factor Tu GTP binding domain E4N72_02815 PF11987 Translation-initiation factor 2 E4N72_02815 PF04760 Translation initiation factor IF-2, N-terminal region E4N72_02820 PF02033 Ribosome-binding factor A E4N72_02825 PF16198 tRNA pseudouridylate synthase B C-terminal domain E4N72_02825 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4N72_02830 PF06574 FAD synthetase E4N72_02830 PF01687 Riboflavin kinase E4N72_02835 PF00312 Ribosomal protein S15 E4N72_02840 PF01138 3' exoribonuclease family, domain 1 E4N72_02840 PF00013 KH domain E4N72_02840 PF00575 S1 RNA binding domain E4N72_02840 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4N72_02840 PF03725 3' exoribonuclease family, domain 2 E4N72_02845 PF00692 dUTPase E4N72_02865 PF00773 RNB domain E4N72_02880 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4N72_02890 PF13478 XdhC Rossmann domain E4N72_02890 PF02625 XdhC and CoxI family E4N72_02900 PF00583 Acetyltransferase (GNAT) family E4N72_02905 PF02502 Ribose/Galactose Isomerase E4N72_02915 PF00005 ABC transporter E4N72_02915 PF08021 Siderophore-interacting FAD-binding domain E4N72_02915 PF04954 Siderophore-interacting protein E4N72_02915 PF00664 ABC transporter transmembrane region E4N72_02920 PF00664 ABC transporter transmembrane region E4N72_02920 PF00005 ABC transporter E4N72_02925 PF00155 Aminotransferase class I and II E4N72_02930 PF06826 Predicted Permease Membrane Region E4N72_02945 PF08241 Methyltransferase domain E4N72_03000 PF01661 Macro domain E4N72_03025 PF00440 Bacterial regulatory proteins, tetR family E4N72_03025 PF17925 Tetracyclin repressor-like, C-terminal domain E4N72_03035 PF00392 Bacterial regulatory proteins, gntR family E4N72_03040 PF00005 ABC transporter E4N72_03050 PF13173 AAA domain E4N72_03050 PF13635 Domain of unknown function (DUF4143) E4N72_03060 PF03963 Flagellar hook capping protein - N-terminal region E4N72_03065 PF00460 Flagella basal body rod protein E4N72_03065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N72_03065 PF07559 Flagellar basal body protein FlaE E4N72_03075 PF01618 MotA/TolQ/ExbB proton channel family E4N72_03080 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4N72_03080 PF00691 OmpA family E4N72_03085 PF03748 Flagellar basal body-associated protein FliL E4N72_03090 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4N72_03090 PF02154 Flagellar motor switch protein FliM E4N72_03095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4N72_03095 PF04509 CheC-like family E4N72_03105 PF00813 FliP family E4N72_03110 PF01313 Bacterial export proteins, family 3 E4N72_03115 PF01311 Bacterial export proteins, family 1 E4N72_03120 PF01312 FlhB HrpN YscU SpaS Family E4N72_03125 PF00771 FHIPEP family E4N72_03130 PF00448 SRP54-type protein, GTPase domain E4N72_03135 PF10609 NUBPL iron-transfer P-loop NTPase E4N72_03145 PF01554 MatE E4N72_03150 PF07859 alpha/beta hydrolase fold E4N72_03155 PF01136 Peptidase family U32 E4N72_03155 PF16325 Peptidase family U32 C-terminal domain E4N72_03165 PF00270 DEAD/DEAH box helicase E4N72_03165 PF00271 Helicase conserved C-terminal domain E4N72_03165 PF17191 RecG wedge domain E4N72_03170 PF01327 Polypeptide deformylase E4N72_03175 PF02911 Formyl transferase, C-terminal domain E4N72_03175 PF00551 Formyl transferase E4N72_03190 PF13649 Methyltransferase domain E4N72_03210 PF01032 FecCD transport family E4N72_03215 PF00005 ABC transporter E4N72_03230 PF10135 Rod binding protein E4N72_03235 PF00460 Flagella basal body rod protein E4N72_03235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N72_03240 PF00460 Flagella basal body rod protein E4N72_03240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N72_03245 PF04851 Type III restriction enzyme, res subunit E4N72_03245 PF00271 Helicase conserved C-terminal domain E4N72_03250 PF01048 Phosphorylase superfamily E4N72_03255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4N72_03260 PF08501 Shikimate dehydrogenase substrate binding domain E4N72_03260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4N72_03260 PF01488 Shikimate / quinate 5-dehydrogenase E4N72_03270 PF04468 PSP1 C-terminal conserved region E4N72_03285 PF04225 Opacity-associated protein A LysM-like domain E4N72_03285 PF01551 Peptidase family M23 E4N72_03295 PF02223 Thymidylate kinase E4N72_03305 PF01103 Surface antigen E4N72_03305 PF07244 Surface antigen variable number repeat E4N72_03315 PF01624 MutS domain I E4N72_03315 PF05188 MutS domain II E4N72_03315 PF05192 MutS domain III E4N72_03315 PF05190 MutS family domain IV E4N72_03315 PF00488 MutS domain V E4N72_03320 PF13187 4Fe-4S dicluster domain E4N72_03330 PF01551 Peptidase family M23 E4N72_03330 PF10145 Phage-related minor tail protein E4N72_03330 PF01464 Transglycosylase SLT domain E4N72_03345 PF03590 Aspartate-ammonia ligase E4N72_03370 PF13407 Periplasmic binding protein domain E4N72_03370 PF18610 Periplasmic binding protein domain E4N72_03375 PF00005 ABC transporter E4N72_03380 PF02653 Branched-chain amino acid transport system / permease component E4N72_03400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain E4N72_03400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain E4N72_03405 PF00378 Enoyl-CoA hydratase/isomerase E4N72_03410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E4N72_03410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E4N72_03415 PF00571 CBS domain E4N72_03415 PF03471 Transporter associated domain E4N72_03415 PF01595 Cyclin M transmembrane N-terminal domain E4N72_03430 PF02203 Tar ligand binding domain homologue E4N72_03430 PF00672 HAMP domain E4N72_03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_03445 PF01588 Putative tRNA binding domain E4N72_03445 PF09334 tRNA synthetases class I (M) E4N72_03455 PF06421 GTP-binding protein LepA C-terminus E4N72_03455 PF00009 Elongation factor Tu GTP binding domain E4N72_03455 PF14492 Elongation Factor G, domain II E4N72_03455 PF00679 Elongation factor G C-terminus E4N72_03455 PF03144 Elongation factor Tu domain 2 E4N72_03465 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_03470 PF08264 Anticodon-binding domain of tRNA E4N72_03470 PF00133 tRNA synthetases class I (I, L, M and V) E4N72_03470 PF10458 Valyl tRNA synthetase tRNA binding arm E4N72_03490 PF01973 Protein of unknown function DUF115 E4N72_03525 PF02899 Phage integrase, N-terminal SAM-like domain E4N72_03525 PF00589 Phage integrase family E4N72_03530 PF01131 DNA topoisomerase E4N72_03530 PF01396 Topoisomerase DNA binding C4 zinc finger E4N72_03530 PF01751 Toprim domain E4N72_03535 PF17782 DprA winged helix domain E4N72_03535 PF02481 DNA recombination-mediator protein A E4N72_03550 PF00849 RNA pseudouridylate synthase E4N72_03565 PF00005 ABC transporter E4N72_03570 PF01458 Uncharacterized protein family (UPF0051) E4N72_03580 PF00266 Aminotransferase class-V E4N72_03585 PF13277 YmdB-like protein E4N72_03590 PF00085 Thioredoxin E4N72_03600 PF04072 Leucine carboxyl methyltransferase E4N72_03610 PF03606 C4-dicarboxylate anaerobic carrier E4N72_03615 PF00696 Amino acid kinase family E4N72_03620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4N72_03620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4N72_03630 PF05746 DALR anticodon binding domain E4N72_03630 PF00750 tRNA synthetases class I (R) E4N72_03630 PF03485 Arginyl tRNA synthetase N terminal domain E4N72_03635 PF01882 Protein of unknown function DUF58 E4N72_03645 PF06445 GyrI-like small molecule binding domain E4N72_03645 PF12833 Helix-turn-helix domain E4N72_03655 PF02146 Sir2 family E4N72_03665 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_03670 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_03675 PF07364 Metallopeptidase family M81 E4N72_03675 PF07171 MlrC C-terminus E4N72_03685 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4N72_03685 PF00753 Metallo-beta-lactamase superfamily E4N72_03690 PF03239 Iron permease FTR1 family E4N72_03695 PF10634 Fe2+ transport protein E4N72_03710 PF00005 ABC transporter E4N72_03710 PF02687 FtsX-like permease family E4N72_03710 PF12704 MacB-like periplasmic core domain E4N72_03715 PF00005 ABC transporter E4N72_03720 PF13635 Domain of unknown function (DUF4143) E4N72_03720 PF13173 AAA domain E4N72_03740 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) E4N72_03740 PF07581 The GLUG motif E4N72_03825 PF00005 ABC transporter E4N72_03825 PF17912 MalK OB fold domain E4N72_03825 PF03459 TOBE domain E4N72_03830 PF03806 AbgT putative transporter family E4N72_03835 PF00664 ABC transporter transmembrane region E4N72_03835 PF00005 ABC transporter E4N72_03840 PF00664 ABC transporter transmembrane region E4N72_03840 PF00005 ABC transporter E4N72_03845 PF02743 Cache domain E4N72_03845 PF00672 HAMP domain E4N72_03845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_03855 PF01641 SelR domain E4N72_03855 PF01625 Peptide methionine sulfoxide reductase E4N72_03860 PF13419 Haloacid dehalogenase-like hydrolase E4N72_03865 PF00892 EamA-like transporter family E4N72_03870 PF00849 RNA pseudouridylate synthase E4N72_03870 PF01479 S4 domain E4N72_03885 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_03890 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_03895 PF00005 ABC transporter E4N72_03910 PF01048 Phosphorylase superfamily E4N72_03950 PF01555 DNA methylase E4N72_03995 PF00270 DEAD/DEAH box helicase E4N72_03995 PF00570 HRDC domain E4N72_03995 PF16124 RecQ zinc-binding E4N72_03995 PF09382 RQC domain E4N72_03995 PF00271 Helicase conserved C-terminal domain E4N72_04035 PF13419 Haloacid dehalogenase-like hydrolase E4N72_04040 PF00924 Mechanosensitive ion channel E4N72_04040 PF05552 Conserved TM helix E4N72_04050 PF00580 UvrD/REP helicase N-terminal domain E4N72_04050 PF13361 UvrD-like helicase C-terminal domain E4N72_04060 PF01420 Type I restriction modification DNA specificity domain E4N72_04070 PF01381 Helix-turn-helix E4N72_04085 PF02661 Fic/DOC family E4N72_04085 PF12728 Helix-turn-helix domain E4N72_04090 PF02899 Phage integrase, N-terminal SAM-like domain E4N72_04090 PF00589 Phage integrase family E4N72_04100 PF01420 Type I restriction modification DNA specificity domain E4N72_04105 PF03543 Yersinia/Haemophilus virulence surface antigen E4N72_04105 PF13018 Extended Signal Peptide of Type V secretion system E4N72_04105 PF13332 Hemagglutinin repeat E4N72_04105 PF02661 Fic/DOC family E4N72_04105 PF05860 haemagglutination activity domain E4N72_04110 PF02384 N-6 DNA Methylase E4N72_04115 PF08463 EcoEI R protein C-terminal E4N72_04115 PF00271 Helicase conserved C-terminal domain E4N72_04115 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4N72_04115 PF04851 Type III restriction enzyme, res subunit E4N72_04150 PF08323 Starch synthase catalytic domain E4N72_04150 PF00534 Glycosyl transferases group 1 E4N72_04165 PF02390 Putative methyltransferase E4N72_04175 PF00849 RNA pseudouridylate synthase E4N72_04180 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4N72_04185 PF00814 Glycoprotease family E4N72_04190 PF00672 HAMP domain E4N72_04190 PF01966 HD domain E4N72_04195 PF02599 Global regulator protein family E4N72_04200 PF02623 FliW protein E4N72_04205 PF00700 Bacterial flagellin C-terminal helical region E4N72_04205 PF00669 Bacterial flagellin N-terminal helical region E4N72_04210 PF07196 Flagellin hook IN motif E4N72_04210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N72_04220 PF03313 Serine dehydratase alpha chain E4N72_04225 PF01842 ACT domain E4N72_04225 PF03315 Serine dehydratase beta chain E4N72_04230 PF01212 Beta-eliminating lyase E4N72_04235 PF01545 Cation efflux family E4N72_04235 PF16916 Dimerisation domain of Zinc Transporter E4N72_04265 PF12146 Serine aminopeptidase, S33 E4N72_04295 PF14102 Capsule biosynthesis CapC E4N72_04310 PF00381 PTS HPr component phosphorylation site E4N72_04315 PF07475 HPr Serine kinase C-terminal domain E4N72_04315 PF02603 HPr Serine kinase N terminus E4N72_04325 PF00128 Alpha amylase, catalytic domain E4N72_04325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4N72_04330 PF00343 Carbohydrate phosphorylase E4N72_04340 PF00334 Nucleoside diphosphate kinase E4N72_04345 PF00448 SRP54-type protein, GTPase domain E4N72_04345 PF02881 SRP54-type protein, helical bundle domain E4N72_04345 PF02978 Signal peptide binding domain E4N72_04355 PF00156 Phosphoribosyl transferase domain E4N72_04360 PF13635 Domain of unknown function (DUF4143) E4N72_04360 PF13173 AAA domain E4N72_04370 PF00132 Bacterial transferase hexapeptide (six repeats) E4N72_04375 PF00483 Nucleotidyl transferase E4N72_04380 PF16363 GDP-mannose 4,6 dehydratase E4N72_04385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4N72_04390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4N72_04390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4N72_04390 PF00205 Thiamine pyrophosphate enzyme, central domain E4N72_04395 PF00682 HMGL-like E4N72_04395 PF07836 DmpG-like communication domain E4N72_04400 PF13419 Haloacid dehalogenase-like hydrolase E4N72_04405 PF16363 GDP-mannose 4,6 dehydratase E4N72_04425 PF01501 Glycosyl transferase family 8 E4N72_04425 PF00535 Glycosyl transferase family 2 E4N72_04430 PF00535 Glycosyl transferase family 2 E4N72_04440 PF00534 Glycosyl transferases group 1 E4N72_04440 PF13439 Glycosyltransferase Family 4 E4N72_04450 PF00483 Nucleotidyl transferase E4N72_04455 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E4N72_04470 PF04321 RmlD substrate binding domain E4N72_04475 PF16363 GDP-mannose 4,6 dehydratase E4N72_04495 PF09820 Predicted AAA-ATPase E4N72_04495 PF08011 PD-(D/E)XK nuclease superfamily E4N72_04520 PF12704 MacB-like periplasmic core domain E4N72_04520 PF02687 FtsX-like permease family E4N72_04520 PF00005 ABC transporter E4N72_04525 PF00005 ABC transporter E4N72_04540 PF13847 Methyltransferase domain E4N72_04545 PF00176 SNF2 family N-terminal domain E4N72_04545 PF00271 Helicase conserved C-terminal domain E4N72_04545 PF12419 SNF2 Helicase protein E4N72_04560 PF01706 FliG C-terminal domain E4N72_04560 PF14842 FliG N-terminal domain E4N72_04560 PF14841 FliG middle domain E4N72_04565 PF08367 Peptidase M16C associated E4N72_04565 PF00675 Insulinase (Peptidase family M16) E4N72_04565 PF05193 Peptidase M16 inactive domain E4N72_04570 PF00204 DNA gyrase B E4N72_04570 PF00986 DNA gyrase B subunit, carboxyl terminus E4N72_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N72_04570 PF01751 Toprim domain E4N72_04585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4N72_04595 PF02629 CoA binding domain E4N72_04595 PF06971 Putative DNA-binding protein N-terminus E4N72_04600 PF10672 S-adenosylmethionine-dependent methyltransferase E4N72_04600 PF01170 Putative RNA methylase family UPF0020 E4N72_04600 PF02926 THUMP domain E4N72_04610 PF01702 Queuine tRNA-ribosyltransferase E4N72_04625 PF01967 MoaC family E4N72_04715 PF10124 Mu-like prophage major head subunit gpT E4N72_04740 PF13401 AAA domain E4N72_04740 PF01471 Putative peptidoglycan binding domain E4N72_04810 PF01555 DNA methylase E4N72_04820 PF03237 Terminase-like family E4N72_04870 PF02743 Cache domain E4N72_04870 PF00672 HAMP domain E4N72_04870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_04875 PF16868 NMT1-like family E4N72_04885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4N72_04910 PF00162 Phosphoglycerate kinase E4N72_04945 PF17239 Family of unknown function (DUF5312) E4N72_04950 PF01739 CheR methyltransferase, SAM binding domain E4N72_04950 PF03705 CheR methyltransferase, all-alpha domain E4N72_04955 PF01339 CheB methylesterase E4N72_04955 PF00072 Response regulator receiver domain E4N72_04970 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_04975 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_04990 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4N72_04990 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4N72_04990 PF00703 Glycosyl hydrolases family 2 E4N72_04990 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 E4N72_05010 PF13193 AMP-binding enzyme C-terminal domain E4N72_05010 PF00501 AMP-binding enzyme E4N72_05015 PF02690 Na+/Pi-cotransporter E4N72_05020 PF00391 PEP-utilising enzyme, mobile domain E4N72_05020 PF02896 PEP-utilising enzyme, TIM barrel domain E4N72_05020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4N72_05045 PF12102 Domain of unknown function (DUF3578) E4N72_05045 PF07728 AAA domain (dynein-related subfamily) E4N72_05120 PF03167 Uracil DNA glycosylase superfamily E4N72_05125 PF18074 Primosomal protein N C-terminal domain E4N72_05125 PF17764 3′ DNA-binding domain (3′BD) E4N72_05125 PF00271 Helicase conserved C-terminal domain E4N72_05125 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4N72_05125 PF00270 DEAD/DEAH box helicase E4N72_05130 PF01238 Phosphomannose isomerase type I E4N72_05170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4N72_05170 PF03819 MazG nucleotide pyrophosphohydrolase domain E4N72_05180 PF04960 Glutaminase E4N72_05210 PF03932 CutC family E4N72_05225 PF02954 Bacterial regulatory protein, Fis family E4N72_05225 PF00989 PAS fold E4N72_05225 PF00158 Sigma-54 interaction domain E4N72_05240 PF00795 Carbon-nitrogen hydrolase E4N72_05245 PF10509 Galactokinase galactose-binding signature E4N72_05245 PF08544 GHMP kinases C terminal E4N72_05260 PF03477 ATP cone domain E4N72_05260 PF00317 Ribonucleotide reductase, all-alpha domain E4N72_05260 PF02867 Ribonucleotide reductase, barrel domain E4N72_05265 PF01230 HIT domain E4N72_05270 PF08544 GHMP kinases C terminal E4N72_05270 PF00288 GHMP kinases N terminal domain E4N72_05275 PF04026 SpoVG E4N72_05285 PF01386 Ribosomal L25p family E4N72_05285 PF14693 Ribosomal protein TL5, C-terminal domain E4N72_05290 PF01171 PP-loop family E4N72_05300 PF13180 PDZ domain E4N72_05305 PF02386 Cation transport protein E4N72_05310 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_05315 PF08402 TOBE domain E4N72_05315 PF00005 ABC transporter E4N72_05325 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase E4N72_05330 PF00999 Sodium/hydrogen exchanger family E4N72_05335 PF08241 Methyltransferase domain E4N72_05350 PF02652 L-lactate permease E4N72_05355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N72_05365 PF03129 Anticodon binding domain E4N72_05365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4N72_05365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N72_05375 PF00912 Transglycosylase E4N72_05375 PF17092 Penicillin-binding protein OB-like domain E4N72_05375 PF00905 Penicillin binding protein transpeptidase domain E4N72_05395 PF00448 SRP54-type protein, GTPase domain E4N72_05395 PF02881 SRP54-type protein, helical bundle domain E4N72_05405 PF02687 FtsX-like permease family E4N72_05405 PF12704 MacB-like periplasmic core domain E4N72_05410 PF00005 ABC transporter E4N72_05420 PF01547 Bacterial extracellular solute-binding protein E4N72_05425 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_05430 PF08402 TOBE domain E4N72_05430 PF00005 ABC transporter E4N72_05440 PF01367 5'-3' exonuclease, C-terminal SAM fold E4N72_05440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4N72_05440 PF01612 3'-5' exonuclease E4N72_05440 PF00476 DNA polymerase family A E4N72_05455 PF13545 Crp-like helix-turn-helix domain E4N72_05455 PF00027 Cyclic nucleotide-binding domain E4N72_05460 PF01565 FAD binding domain E4N72_05460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4N72_05465 PF09190 DALR domain E4N72_05465 PF01406 tRNA synthetases class I (C) catalytic domain E4N72_05470 PF04542 Sigma-70 region 2 E4N72_05470 PF04539 Sigma-70 region 3 E4N72_05470 PF04545 Sigma-70, region 4 E4N72_05480 PF01841 Transglutaminase-like superfamily E4N72_05485 PF00696 Amino acid kinase family E4N72_05490 PF00226 DnaJ domain E4N72_05490 PF01556 DnaJ C terminal domain E4N72_05490 PF00684 DnaJ central domain E4N72_05495 PF01176 Translation initiation factor 1A / IF-1 E4N72_05515 PF00834 Ribulose-phosphate 3 epimerase family E4N72_05535 PF04551 GcpE protein E4N72_05545 PF02540 NAD synthase E4N72_05570 PF01783 Ribosomal L32p protein family E4N72_05575 PF00550 Phosphopantetheine attachment site E4N72_05580 PF00035 Double-stranded RNA binding motif E4N72_05580 PF14622 Ribonuclease-III-like E4N72_05585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_05585 PF02743 Cache domain E4N72_05585 PF00672 HAMP domain E4N72_05590 PF01430 Hsp33 protein E4N72_05610 PF00258 Flavodoxin E4N72_05610 PF00753 Metallo-beta-lactamase superfamily E4N72_05610 PF00301 Rubredoxin E4N72_05615 PF01012 Electron transfer flavoprotein domain E4N72_05615 PF00766 Electron transfer flavoprotein FAD-binding domain E4N72_05620 PF02770 Acyl-CoA dehydrogenase, middle domain E4N72_05620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4N72_05620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4N72_05625 PF00989 PAS fold E4N72_05625 PF02954 Bacterial regulatory protein, Fis family E4N72_05625 PF00158 Sigma-54 interaction domain E4N72_05635 PF00378 Enoyl-CoA hydratase/isomerase E4N72_05645 PF02515 CoA-transferase family III E4N72_05650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4N72_05650 PF02770 Acyl-CoA dehydrogenase, middle domain E4N72_05650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4N72_05655 PF00766 Electron transfer flavoprotein FAD-binding domain E4N72_05655 PF13237 4Fe-4S dicluster domain E4N72_05655 PF01012 Electron transfer flavoprotein domain E4N72_05665 PF18269 T3SS EscN ATPase C-terminal domain E4N72_05665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N72_05665 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4N72_05670 PF02108 Flagellar assembly protein FliH E4N72_05675 PF01706 FliG C-terminal domain E4N72_05675 PF14841 FliG middle domain E4N72_05675 PF14842 FliG N-terminal domain E4N72_05680 PF01514 Secretory protein of YscJ/FliF family E4N72_05680 PF08345 Flagellar M-ring protein C-terminal E4N72_05685 PF02049 Flagellar hook-basal body complex protein FliE E4N72_05690 PF00460 Flagella basal body rod protein E4N72_05690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N72_05700 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_05700 PF07724 AAA domain (Cdc48 subfamily) E4N72_05705 PF00227 Proteasome subunit E4N72_05710 PF03051 Peptidase C1-like family E4N72_05720 PF01926 50S ribosome-binding GTPase E4N72_05725 PF00342 Phosphoglucose isomerase E4N72_05730 PF00953 Glycosyl transferase family 4 E4N72_05735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4N72_05735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4N72_05740 PF08011 PD-(D/E)XK nuclease superfamily E4N72_05740 PF09820 Predicted AAA-ATPase E4N72_05745 PF03989 DNA gyrase C-terminal domain, beta-propeller E4N72_05745 PF00521 DNA gyrase/topoisomerase IV, subunit A E4N72_05750 PF00204 DNA gyrase B E4N72_05750 PF00986 DNA gyrase B subunit, carboxyl terminus E4N72_05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N72_05750 PF01751 Toprim domain E4N72_05755 PF00872 Transposase, Mutator family E4N72_05760 PF00872 Transposase, Mutator family E4N72_05770 PF01381 Helix-turn-helix E4N72_05790 PF01555 DNA methylase E4N72_05895 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_05895 PF17862 AAA+ lid domain E4N72_05895 PF01434 Peptidase family M41 E4N72_05990 PF13654 AAA domain E4N72_05990 PF05362 Lon protease (S16) C-terminal proteolytic domain E4N72_06010 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_06015 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_06030 PF13580 SIS domain E4N72_06035 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4N72_06040 PF16314 Domain of unknown function (DUF4954) E4N72_06060 PF00072 Response regulator receiver domain E4N72_06060 PF00158 Sigma-54 interaction domain E4N72_06060 PF02954 Bacterial regulatory protein, Fis family E4N72_06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N72_06065 PF00512 His Kinase A (phospho-acceptor) domain E4N72_06065 PF00989 PAS fold E4N72_06070 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E4N72_06075 PF00075 RNase H E4N72_06080 PF00793 DAHP synthetase I family E4N72_06085 PF01594 AI-2E family transporter E4N72_06090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4N72_06095 PF01979 Amidohydrolase family E4N72_06115 PF02463 RecF/RecN/SMC N terminal domain E4N72_06120 PF01513 ATP-NAD kinase E4N72_06125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4N72_06130 PF01584 CheW-like domain E4N72_06155 PF02743 Cache domain E4N72_06155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_06155 PF00672 HAMP domain E4N72_06165 PF01425 Amidase E4N72_06170 PF02934 GatB/GatE catalytic domain E4N72_06170 PF02637 GatB domain E4N72_06175 PF00072 Response regulator receiver domain E4N72_06175 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N72_06180 PF04773 FecR protein E4N72_06190 PF00753 Metallo-beta-lactamase superfamily E4N72_06190 PF12706 Beta-lactamase superfamily domain E4N72_06215 PF07687 Peptidase dimerisation domain E4N72_06215 PF01546 Peptidase family M20/M25/M40 E4N72_06230 PF01032 FecCD transport family E4N72_06235 PF00005 ABC transporter E4N72_06255 PF01979 Amidohydrolase family E4N72_06260 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4N72_06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N72_06265 PF00403 Heavy-metal-associated domain E4N72_06275 PF00005 ABC transporter E4N72_06280 PF04304 Protein of unknown function (DUF454) E4N72_06290 PF03372 Endonuclease/Exonuclease/phosphatase family E4N72_06300 PF01740 STAS domain E4N72_06305 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain E4N72_06305 PF07228 Stage II sporulation protein E (SpoIIE) E4N72_06310 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_06310 PF01434 Peptidase family M41 E4N72_06310 PF17862 AAA+ lid domain E4N72_06320 PF02580 D-Tyr-tRNA(Tyr) deacylase E4N72_06325 PF01195 Peptidyl-tRNA hydrolase E4N72_06330 PF00154 recA bacterial DNA recombination protein E4N72_06335 PF00005 ABC transporter E4N72_06350 PF02824 TGS domain E4N72_06350 PF04607 Region found in RelA / SpoT proteins E4N72_06350 PF13291 ACT domain E4N72_06360 PF17827 PrmC N-terminal domain E4N72_06360 PF05175 Methyltransferase small domain E4N72_06365 PF00472 RF-1 domain E4N72_06365 PF03462 PCRF domain E4N72_06370 PF12796 Ankyrin repeats (3 copies) E4N72_06380 PF00578 AhpC/TSA family E4N72_06385 PF02683 Cytochrome C biogenesis protein transmembrane region E4N72_06390 PF03466 LysR substrate binding domain E4N72_06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4N72_06395 PF01476 LysM domain E4N72_06395 PF00877 NlpC/P60 family E4N72_06395 PF08239 Bacterial SH3 domain E4N72_06400 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4N72_06400 PF00578 AhpC/TSA family E4N72_06405 PF02075 Crossover junction endodeoxyribonuclease RuvC E4N72_06415 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4N72_06420 PF00117 Glutamine amidotransferase class-I E4N72_06420 PF00958 GMP synthase C terminal domain E4N72_06425 PF00809 Pterin binding enzyme E4N72_06430 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4N72_06440 PF01648 4'-phosphopantetheinyl transferase superfamily E4N72_06445 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4N72_06450 PF01416 tRNA pseudouridine synthase E4N72_06455 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4N72_06455 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4N72_06460 PF01554 MatE E4N72_06465 PF01037 Lrp/AsnC ligand binding domain E4N72_06470 PF00155 Aminotransferase class I and II E4N72_06480 PF00005 ABC transporter E4N72_06480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N72_06485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N72_06485 PF00005 ABC transporter E4N72_06490 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_06495 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_06500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N72_06530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4N72_06530 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N72_06540 PF02632 BioY family E4N72_06545 PF00005 ABC transporter E4N72_06555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_06555 PF00672 HAMP domain E4N72_06555 PF02743 Cache domain E4N72_06565 PF03033 Glycosyltransferase family 28 N-terminal domain E4N72_06565 PF04101 Glycosyltransferase family 28 C-terminal domain E4N72_06575 PF09115 DNA polymerase III, delta subunit, C terminal E4N72_06595 PF00772 DnaB-like helicase N terminal domain E4N72_06595 PF03796 DnaB-like helicase C terminal domain E4N72_06600 PF03948 Ribosomal protein L9, C-terminal domain E4N72_06600 PF01281 Ribosomal protein L9, N-terminal domain E4N72_06605 PF01084 Ribosomal protein S18 E4N72_06610 PF00436 Single-strand binding protein family E4N72_06615 PF01250 Ribosomal protein S6 E4N72_06625 PF00672 HAMP domain E4N72_06625 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N72_06635 PF02401 LytB protein E4N72_06640 PF00266 Aminotransferase class-V E4N72_06645 PF01761 3-dehydroquinate synthase E4N72_06655 PF02527 rRNA small subunit methyltransferase G E4N72_06660 PF00849 RNA pseudouridylate synthase E4N72_06660 PF01479 S4 domain E4N72_06665 PF14542 GCN5-related N-acetyl-transferase E4N72_06705 PF01145 SPFH domain / Band 7 family E4N72_06715 PF00117 Glutamine amidotransferase class-I E4N72_06715 PF06418 CTP synthase N-terminus E4N72_06730 PF03548 Outer membrane lipoprotein carrier protein LolA E4N72_06740 PF00919 Uncharacterized protein family UPF0004 E4N72_06740 PF04055 Radical SAM superfamily E4N72_06740 PF18693 TRAM domain E4N72_06755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4N72_06755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N72_06755 PF03129 Anticodon binding domain E4N72_06775 PF03841 L-seryl-tRNA selenium transferase E4N72_06775 PF12390 Selenocysteine synthase N terminal E4N72_06780 PF00009 Elongation factor Tu GTP binding domain E4N72_06780 PF09106 Elongation factor SelB, winged helix E4N72_06780 PF09107 Elongation factor SelB, winged helix E4N72_06780 PF09105 Elongation factor SelB, winged helix E4N72_06780 PF03144 Elongation factor Tu domain 2 E4N72_06790 PF05681 Fumarate hydratase (Fumerase) E4N72_06790 PF05683 Fumarase C-terminus E4N72_06795 PF02616 Segregation and condensation protein ScpA E4N72_06800 PF04079 Segregation and condensation complex subunit ScpB E4N72_06805 PF00849 RNA pseudouridylate synthase E4N72_06805 PF01479 S4 domain E4N72_06810 PF03099 Biotin/lipoate A/B protein ligase family E4N72_06810 PF02237 Biotin protein ligase C terminal domain E4N72_06815 PF00929 Exonuclease E4N72_06820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4N72_06820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4N72_06820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4N72_06820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4N72_06825 PF06470 SMC proteins Flexible Hinge Domain E4N72_06825 PF02463 RecF/RecN/SMC N terminal domain E4N72_06835 PF13525 Outer membrane lipoprotein E4N72_06840 PF03880 DbpA RNA binding domain E4N72_06850 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4N72_06850 PF01078 Magnesium chelatase, subunit ChlI E4N72_06855 PF01192 RNA polymerase Rpb6 E4N72_06875 PF01973 Protein of unknown function DUF115 E4N72_06895 PF01266 FAD dependent oxidoreductase E4N72_06895 PF04324 BFD-like [2Fe-2S] binding domain E4N72_06900 PF04324 BFD-like [2Fe-2S] binding domain E4N72_06900 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N72_06910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4N72_06910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4N72_06925 PF01476 LysM domain E4N72_06925 PF01464 Transglycosylase SLT domain E4N72_06930 PF13488 Glycine zipper E4N72_06930 PF00691 OmpA family E4N72_06940 PF07075 Protein of unknown function (DUF1343) E4N72_06945 PF00933 Glycosyl hydrolase family 3 N terminal domain E4N72_06945 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4N72_06950 PF03577 Peptidase family C69 E4N72_06955 PF16657 Maltogenic Amylase, C-terminal domain E4N72_06955 PF02903 Alpha amylase, N-terminal ig-like domain E4N72_06955 PF00128 Alpha amylase, catalytic domain E4N72_06960 PF02909 Tetracyclin repressor-like, C-terminal domain E4N72_06960 PF00440 Bacterial regulatory proteins, tetR family E4N72_06965 PF00005 ABC transporter E4N72_06970 PF01381 Helix-turn-helix E4N72_06975 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB E4N72_06980 PF00535 Glycosyl transferase family 2 E4N72_06990 PF00291 Pyridoxal-phosphate dependent enzyme E4N72_06990 PF14821 Threonine synthase N terminus E4N72_06995 PF04002 RadC-like JAB domain E4N72_07010 PF00753 Metallo-beta-lactamase superfamily E4N72_07010 PF01613 Flavin reductase like domain E4N72_07015 PF01588 Putative tRNA binding domain E4N72_07020 PF00664 ABC transporter transmembrane region E4N72_07020 PF00005 ABC transporter E4N72_07025 PF00664 ABC transporter transmembrane region E4N72_07025 PF00005 ABC transporter E4N72_07035 PF00005 ABC transporter E4N72_07060 PF00440 Bacterial regulatory proteins, tetR family E4N72_07060 PF08361 MAATS-type transcriptional repressor, C-terminal region E4N72_07070 PF00348 Polyprenyl synthetase E4N72_07075 PF01728 FtsJ-like methyltransferase E4N72_07080 PF00679 Elongation factor G C-terminus E4N72_07080 PF03764 Elongation factor G, domain IV E4N72_07080 PF00009 Elongation factor Tu GTP binding domain E4N72_07080 PF03144 Elongation factor Tu domain 2 E4N72_07080 PF14492 Elongation Factor G, domain II E4N72_07085 PF00672 HAMP domain E4N72_07085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_07085 PF02743 Cache domain E4N72_07105 PF03702 Anhydro-N-acetylmuramic acid kinase E4N72_07115 PF02080 TrkA-C domain E4N72_07115 PF02254 TrkA-N domain E4N72_07120 PF13091 PLD-like domain E4N72_07130 PF01351 Ribonuclease HII E4N72_07160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4N72_07160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4N72_07165 PF03006 Haemolysin-III related E4N72_07170 PF01197 Ribosomal protein L31 E4N72_07175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N72_07175 PF07497 Rho termination factor, RNA-binding domain E4N72_07175 PF07498 Rho termination factor, N-terminal domain E4N72_07180 PF18146 Damage-inducible protein CinA KH domain E4N72_07180 PF00994 Probable molybdopterin binding domain E4N72_07180 PF02464 Competence-damaged protein E4N72_07190 PF00795 Carbon-nitrogen hydrolase E4N72_07195 PF00216 Bacterial DNA-binding protein E4N72_07200 PF01649 Ribosomal protein S20 E4N72_07210 PF04620 Flagellar filament outer layer protein Flaa E4N72_07220 PF01520 N-acetylmuramoyl-L-alanine amidase E4N72_07225 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4N72_07225 PF02844 Phosphoribosylglycinamide synthetase, N domain E4N72_07225 PF02843 Phosphoribosylglycinamide synthetase, C domain E4N72_07230 PF02348 Cytidylyltransferase E4N72_07240 PF13186 Iron-sulfur cluster-binding domain E4N72_07255 PF00072 Response regulator receiver domain E4N72_07265 PF01584 CheW-like domain E4N72_07280 PF00085 Thioredoxin E4N72_07285 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N72_07290 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_07295 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_07305 PF00128 Alpha amylase, catalytic domain E4N72_07305 PF02903 Alpha amylase, N-terminal ig-like domain E4N72_07305 PF16657 Maltogenic Amylase, C-terminal domain E4N72_07310 PF13416 Bacterial extracellular solute-binding protein E4N72_07315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4N72_07315 PF00128 Alpha amylase, catalytic domain E4N72_07315 PF03714 Bacterial pullanase-associated domain E4N72_07320 PF01743 Poly A polymerase head domain E4N72_07320 PF12626 Polymerase A arginine-rich C-terminus E4N72_07320 PF12627 Probable RNA and SrmB- binding site of polymerase A E4N72_07325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4N72_07335 PF16811 TRAP transporter T-component E4N72_07345 PF00375 Sodium:dicarboxylate symporter family E4N72_07365 PF01047 MarR family E4N72_07385 PF00664 ABC transporter transmembrane region E4N72_07385 PF00005 ABC transporter E4N72_07385 PF08021 Siderophore-interacting FAD-binding domain E4N72_07385 PF04954 Siderophore-interacting protein E4N72_07395 PF00005 ABC transporter E4N72_07395 PF00664 ABC transporter transmembrane region E4N72_07400 PF04607 Region found in RelA / SpoT proteins E4N72_07415 PF01926 50S ribosome-binding GTPase E4N72_07415 PF10396 GTP-binding protein TrmE N-terminus E4N72_07415 PF12631 MnmE helical domain E4N72_07420 PF05191 Adenylate kinase, active site lid E4N72_07430 PF01098 Cell cycle protein E4N72_07435 PF03717 Penicillin-binding Protein dimerisation domain E4N72_07435 PF00905 Penicillin binding protein transpeptidase domain E4N72_07470 PF03979 Sigma-70 factor, region 1.1 E4N72_07470 PF00140 Sigma-70 factor, region 1.2 E4N72_07470 PF04542 Sigma-70 region 2 E4N72_07470 PF04539 Sigma-70 region 3 E4N72_07470 PF04545 Sigma-70, region 4 E4N72_07475 PF08275 DNA primase catalytic core, N-terminal domain E4N72_07475 PF01807 CHC2 zinc finger E4N72_07480 PF02618 YceG-like family E4N72_07500 PF01297 Zinc-uptake complex component A periplasmic E4N72_07510 PF00005 ABC transporter E4N72_07515 PF00950 ABC 3 transport family E4N72_07520 PF00950 ABC 3 transport family E4N72_07525 PF04463 Protein of unknown function (DUF523) E4N72_07530 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_07530 PF07724 AAA domain (Cdc48 subfamily) E4N72_07530 PF17871 AAA lid domain E4N72_07530 PF02861 Clp amino terminal domain, pathogenicity island component E4N72_07530 PF10431 C-terminal, D2-small domain, of ClpB protein E4N72_07535 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4N72_07545 PF00953 Glycosyl transferase family 4 E4N72_07550 PF00899 ThiF family E4N72_07555 PF00691 OmpA family E4N72_07560 PF00121 Triosephosphate isomerase E4N72_07610 PF00860 Permease family E4N72_07625 PF00163 Ribosomal protein S4/S9 N-terminal domain E4N72_07625 PF01479 S4 domain E4N72_07640 PF01168 Alanine racemase, N-terminal domain E4N72_07650 PF01316 Arginine repressor, DNA binding domain E4N72_07650 PF02863 Arginine repressor, C-terminal domain E4N72_07655 PF02547 Queuosine biosynthesis protein E4N72_07665 PF01368 DHH family E4N72_07665 PF02272 DHHA1 domain E4N72_07675 PF02938 GAD domain E4N72_07675 PF00152 tRNA synthetases class II (D, K and N) E4N72_07675 PF01336 OB-fold nucleic acid binding domain E4N72_07680 PF00152 tRNA synthetases class II (D, K and N) E4N72_07705 PF01966 HD domain E4N72_07705 PF00013 KH domain E4N72_07705 PF12072 Domain of unknown function (DUF3552) E4N72_07730 PF17762 HTH domain found in ParB protein E4N72_07730 PF02195 ParB-like nuclease domain E4N72_07735 PF13614 AAA domain E4N72_07740 PF05362 Lon protease (S16) C-terminal proteolytic domain E4N72_07740 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4N72_07740 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_07745 PF02132 RecR protein E4N72_07745 PF13662 Toprim domain E4N72_07750 PF02575 YbaB/EbfC DNA-binding family E4N72_07760 PF12169 DNA polymerase III subunits gamma and tau domain III E4N72_07760 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E4N72_07760 PF12170 DNA polymerase III tau subunit V interacting with alpha E4N72_07765 PF01381 Helix-turn-helix E4N72_07770 PF01555 DNA methylase E4N72_07775 PF04851 Type III restriction enzyme, res subunit E4N72_07780 PF17863 AAA lid domain E4N72_07780 PF07726 ATPase family associated with various cellular activities (AAA) E4N72_07785 PF00456 Transketolase, thiamine diphosphate binding domain E4N72_07785 PF02779 Transketolase, pyrimidine binding domain E4N72_07790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_07790 PF12729 Four helix bundle sensory module for signal transduction E4N72_07790 PF00672 HAMP domain E4N72_07805 PF17131 Outer membrane lipoprotein-sorting protein E4N72_07815 PF00440 Bacterial regulatory proteins, tetR family E4N72_07825 PF14353 CpXC protein E4N72_07830 PF17820 PDZ domain E4N72_07830 PF02163 Peptidase family M50 E4N72_07835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4N72_07835 PF13288 DXP reductoisomerase C-terminal domain E4N72_07835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4N72_07845 PF01255 Putative undecaprenyl diphosphate synthase E4N72_07850 PF01765 Ribosome recycling factor E4N72_07855 PF00889 Elongation factor TS E4N72_07860 PF00318 Ribosomal protein S2 E4N72_07865 PF02545 Maf-like protein E4N72_07870 PF04011 LemA family E4N72_07880 PF01979 Amidohydrolase family E4N72_07885 PF03313 Serine dehydratase alpha chain E4N72_07890 PF00375 Sodium:dicarboxylate symporter family E4N72_07915 PF00561 alpha/beta hydrolase fold E4N72_07950 PF00814 Glycoprotease family E4N72_07965 PF06832 Penicillin-Binding Protein C-terminus Family E4N72_07965 PF00912 Transglycosylase E4N72_07965 PF00905 Penicillin binding protein transpeptidase domain E4N72_07970 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E4N72_07970 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E4N72_07970 PF01835 MG2 domain E4N72_07970 PF17962 Bacterial macroglobulin domain 6 E4N72_07970 PF07703 Alpha-2-macroglobulin bait region domain E4N72_07970 PF00207 Alpha-2-macroglobulin family E4N72_07970 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E4N72_07995 PF00005 ABC transporter E4N72_07995 PF17760 UvrA interaction domain E4N72_07995 PF17755 UvrA DNA-binding domain E4N72_08000 PF00300 Histidine phosphatase superfamily (branch 1) E4N72_08010 PF16258 Domain of unknown function (DUF4912) E4N72_08020 PF00999 Sodium/hydrogen exchanger family E4N72_08025 PF00207 Alpha-2-macroglobulin family E4N72_08025 PF07703 Alpha-2-macroglobulin bait region domain E4N72_08025 PF01835 MG2 domain E4N72_08030 PF08011 PD-(D/E)XK nuclease superfamily E4N72_08030 PF09820 Predicted AAA-ATPase E4N72_08080 PF00905 Penicillin binding protein transpeptidase domain E4N72_08080 PF00912 Transglycosylase E4N72_08080 PF17092 Penicillin-binding protein OB-like domain E4N72_08090 PF02742 Iron dependent repressor, metal binding and dimerisation domain E4N72_08090 PF01325 Iron dependent repressor, N-terminal DNA binding domain E4N72_08095 PF00886 Ribosomal protein S16 E4N72_08105 PF01782 RimM N-terminal domain E4N72_08110 PF01746 tRNA (Guanine-1)-methyltransferase E4N72_08115 PF01245 Ribosomal protein L19 E4N72_08130 PF00072 Response regulator receiver domain E4N72_08135 PF02021 Uncharacterised protein family UPF0102 E4N72_08155 PF08264 Anticodon-binding domain of tRNA E4N72_08155 PF00133 tRNA synthetases class I (I, L, M and V) E4N72_08155 PF13603 Leucyl-tRNA synthetase, Domain 2 E4N72_08155 PF09334 tRNA synthetases class I (M) E4N72_08165 PF00301 Rubredoxin E4N72_08170 PF01554 MatE E4N72_08190 PF03471 Transporter associated domain E4N72_08190 PF00571 CBS domain E4N72_08195 PF02130 Uncharacterized protein family UPF0054 E4N72_08200 PF07698 7TM receptor with intracellular HD hydrolase E4N72_08200 PF07697 7TM-HD extracellular E4N72_08200 PF01966 HD domain E4N72_08205 PF02562 PhoH-like protein E4N72_08215 PF00293 NUDIX domain E4N72_08230 PF01475 Ferric uptake regulator family E4N72_08240 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E4N72_08245 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E4N72_08250 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4N72_08255 PF03616 Sodium/glutamate symporter E4N72_08260 PF01039 Carboxyl transferase domain E4N72_08265 PF01144 Coenzyme A transferase E4N72_08270 PF01144 Coenzyme A transferase E4N72_08275 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit E4N72_08280 PF00364 Biotin-requiring enzyme E4N72_08290 PF03616 Sodium/glutamate symporter E4N72_08295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4N72_08295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4N72_08300 PF02743 Cache domain E4N72_08300 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N72_08300 PF00672 HAMP domain E4N72_08320 PF01661 Macro domain E4N72_08325 PF00365 Phosphofructokinase E4N72_08330 PF02875 Mur ligase family, glutamate ligase domain E4N72_08330 PF08245 Mur ligase middle domain E4N72_08335 PF00849 RNA pseudouridylate synthase E4N72_08340 PF00849 RNA pseudouridylate synthase E4N72_08350 PF00398 Ribosomal RNA adenine dimethylase E4N72_08360 PF13958 Toxin ToxN, type III toxin-antitoxin system E4N72_08365 PF07581 The GLUG motif E4N72_08365 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) E4N72_08380 PF03062 MBOAT, membrane-bound O-acyltransferase family E4N72_08390 PF01145 SPFH domain / Band 7 family E4N72_08395 PF01145 SPFH domain / Band 7 family E4N72_08400 PF02556 Preprotein translocase subunit SecB E4N72_08415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4N72_08415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4N72_08420 PF07715 TonB-dependent Receptor Plug Domain E4N72_08420 PF00593 TonB dependent receptor E4N72_08435 PF00082 Subtilase family E4N72_08455 PF02472 Biopolymer transport protein ExbD/TolR E4N72_08460 PF01618 MotA/TolQ/ExbB proton channel family E4N72_08470 PF10609 NUBPL iron-transfer P-loop NTPase E4N72_08480 PF01790 Prolipoprotein diacylglyceryl transferase E4N72_08490 PF02872 5'-nucleotidase, C-terminal domain E4N72_08490 PF17936 Bacterial Ig domain E4N72_08490 PF00149 Calcineurin-like phosphoesterase E4N72_08520 PF02272 DHHA1 domain E4N72_08520 PF01411 tRNA synthetases class II (A) E4N72_08520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4N72_08530 PF02151 UvrB/uvrC motif E4N72_08530 PF08459 UvrC Helix-hairpin-helix N-terminal E4N72_08530 PF01541 GIY-YIG catalytic domain E4N72_08540 PF01925 Sulfite exporter TauE/SafE E4N72_08545 PF02381 MraZ protein, putative antitoxin-like E4N72_08550 PF01795 MraW methylase family E4N72_08560 PF08245 Mur ligase middle domain E4N72_08560 PF01225 Mur ligase family, catalytic domain E4N72_08560 PF02875 Mur ligase family, glutamate ligase domain E4N72_08565 PF01098 Cell cycle protein E4N72_08570 PF03799 Cell division protein FtsQ E4N72_08570 PF08478 POTRA domain, FtsQ-type E4N72_08575 PF02491 SHS2 domain inserted in FTSA E4N72_08580 PF12327 FtsZ family, C-terminal domain E4N72_08580 PF00091 Tubulin/FtsZ family, GTPase domain E4N72_08590 PF02899 Phage integrase, N-terminal SAM-like domain E4N72_08590 PF00589 Phage integrase family E4N72_08595 PF00291 Pyridoxal-phosphate dependent enzyme E4N72_08630 PF10996 Beta-Casp domain E4N72_08630 PF00753 Metallo-beta-lactamase superfamily E4N72_08630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4N72_08635 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4N72_08635 PF00588 SpoU rRNA Methylase family E4N72_08640 PF00588 SpoU rRNA Methylase family E4N72_08640 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4N72_08645 PF00391 PEP-utilising enzyme, mobile domain E4N72_08645 PF02896 PEP-utilising enzyme, TIM barrel domain E4N72_08660 PF13519 von Willebrand factor type A domain E4N72_08665 PF18663 Pallilysin beta barrel domain E4N72_08670 PF02803 Thiolase, C-terminal domain E4N72_08670 PF00108 Thiolase, N-terminal domain E4N72_08675 PF04073 Aminoacyl-tRNA editing domain E4N72_08680 PF00534 Glycosyl transferases group 1 E4N72_08680 PF08323 Starch synthase catalytic domain E4N72_08685 PF00501 AMP-binding enzyme E4N72_08690 PF03477 ATP cone domain E4N72_08700 PF00465 Iron-containing alcohol dehydrogenase E4N72_08710 PF04343 Protein of unknown function, DUF488 E4N72_08720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N72_08720 PF04073 Aminoacyl-tRNA editing domain E4N72_08720 PF03129 Anticodon binding domain E4N72_08725 PF07009 NusG domain II E4N72_08735 PF01168 Alanine racemase, N-terminal domain E4N72_08735 PF00842 Alanine racemase, C-terminal domain E4N72_08760 PF01207 Dihydrouridine synthase (Dus) E4N72_08765 PF01026 TatD related DNase E4N72_08770 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain E4N72_08770 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain E4N72_08780 PF02719 Polysaccharide biosynthesis protein E4N72_08785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4N72_08790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4N72_08790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4N72_08800 PF00941 FAD binding domain in molybdopterin dehydrogenase E4N72_08805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4N72_08805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4N72_08810 PF01205 Uncharacterized protein family UPF0029 E4N72_08810 PF09186 Domain of unknown function (DUF1949) E4N72_08815 PF01330 RuvA N terminal domain E4N72_08880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N72_08885 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_08890 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N72_08890 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_08895 PF00005 ABC transporter E4N72_08895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N72_08900 PF00005 ABC transporter E4N72_08900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N72_08915 PF01343 Peptidase family S49 E4N72_08935 PF04542 Sigma-70 region 2 E4N72_08935 PF08281 Sigma-70, region 4 E4N72_08960 PF00005 ABC transporter E4N72_08975 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term E4N72_08975 PF12833 Helix-turn-helix domain E4N72_08980 PF03824 High-affinity nickel-transport protein E4N72_08990 PF00830 Ribosomal L28 family E4N72_09010 PF00005 ABC transporter E4N72_09015 PF12683 Protein of unknown function (DUF3798) E4N72_09030 PF00877 NlpC/P60 family E4N72_09035 PF00501 AMP-binding enzyme E4N72_09035 PF13193 AMP-binding enzyme C-terminal domain E4N72_09040 PF00672 HAMP domain E4N72_09040 PF02743 Cache domain E4N72_09040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_09045 PF02687 FtsX-like permease family E4N72_09045 PF12704 MacB-like periplasmic core domain E4N72_09045 PF00005 ABC transporter E4N72_09050 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4N72_09055 PF01725 Ham1 family E4N72_09065 PF03180 NLPA lipoprotein E4N72_09080 PF02424 ApbE family E4N72_09090 PF00274 Fructose-bisphosphate aldolase class-I E4N72_09105 PF02677 Epoxyqueuosine reductase QueH E4N72_09110 PF12848 ABC transporter E4N72_09110 PF00005 ABC transporter E4N72_09110 PF16326 ABC transporter C-terminal domain E4N72_09115 PF08239 Bacterial SH3 domain E4N72_09145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4N72_09150 PF00209 Sodium:neurotransmitter symporter family E4N72_09155 PF01709 Transcriptional regulator E4N72_09165 PF00465 Iron-containing alcohol dehydrogenase E4N72_09170 PF01653 NAD-dependent DNA ligase adenylation domain E4N72_09170 PF00533 BRCA1 C Terminus (BRCT) domain E4N72_09170 PF03120 NAD-dependent DNA ligase OB-fold domain E4N72_09175 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4N72_09180 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4N72_09195 PF00177 Ribosomal protein S7p/S5e E4N72_09200 PF00164 Ribosomal protein S12/S23 E4N72_09205 PF04997 RNA polymerase Rpb1, domain 1 E4N72_09205 PF00623 RNA polymerase Rpb1, domain 2 E4N72_09205 PF04983 RNA polymerase Rpb1, domain 3 E4N72_09205 PF05000 RNA polymerase Rpb1, domain 4 E4N72_09205 PF04998 RNA polymerase Rpb1, domain 5 E4N72_09210 PF04563 RNA polymerase beta subunit E4N72_09210 PF04561 RNA polymerase Rpb2, domain 2 E4N72_09210 PF10385 RNA polymerase beta subunit external 1 domain E4N72_09210 PF00562 RNA polymerase Rpb2, domain 6 E4N72_09210 PF04560 RNA polymerase Rpb2, domain 7 E4N72_09210 PF04565 RNA polymerase Rpb2, domain 3 E4N72_09215 PF00542 Ribosomal protein L7/L12 C-terminal domain E4N72_09215 PF16320 Ribosomal protein L7/L12 dimerisation domain E4N72_09220 PF00466 Ribosomal protein L10 E4N72_09225 PF00687 Ribosomal protein L1p/L10e family E4N72_09230 PF00298 Ribosomal protein L11, RNA binding domain E4N72_09230 PF03946 Ribosomal protein L11, N-terminal domain E4N72_09235 PF00467 KOW motif E4N72_09235 PF02357 Transcription termination factor nusG E4N72_09240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4N72_09250 PF00471 Ribosomal protein L33 E4N72_09270 PF02325 YGGT family E4N72_09275 PF02811 PHP domain E4N72_09275 PF14579 Helix-hairpin-helix motif E4N72_09275 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4N72_09275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4N72_09280 PF01470 Pyroglutamyl peptidase E4N72_09290 PF00574 Clp protease E4N72_09305 PF10502 Signal peptidase, peptidase S26 E4N72_09310 PF02743 Cache domain E4N72_09310 PF00672 HAMP domain E4N72_09310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_09325 PF04055 Radical SAM superfamily E4N72_09340 PF00106 short chain dehydrogenase E4N72_09345 PF00258 Flavodoxin E4N72_09355 PF03606 C4-dicarboxylate anaerobic carrier E4N72_09360 PF12705 PD-(D/E)XK nuclease superfamily E4N72_09385 PF01012 Electron transfer flavoprotein domain E4N72_09385 PF00766 Electron transfer flavoprotein FAD-binding domain E4N72_09390 PF01012 Electron transfer flavoprotein domain E4N72_09395 PF02770 Acyl-CoA dehydrogenase, middle domain E4N72_09395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4N72_09395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4N72_09400 PF00171 Aldehyde dehydrogenase family E4N72_09405 PF01699 Sodium/calcium exchanger protein E4N72_09410 PF04452 RNA methyltransferase E4N72_09420 PF00271 Helicase conserved C-terminal domain E4N72_09420 PF04851 Type III restriction enzyme, res subunit E4N72_09420 PF02151 UvrB/uvrC motif E4N72_09420 PF12344 Ultra-violet resistance protein B E4N72_09420 PF17757 UvrB interaction domain E4N72_09435 PF01467 Cytidylyltransferase-like E4N72_09435 PF01966 HD domain E4N72_09440 PF01467 Cytidylyltransferase-like E4N72_09445 PF01926 50S ribosome-binding GTPase E4N72_09445 PF01018 GTP1/OBG E4N72_09450 PF01016 Ribosomal L27 protein E4N72_09460 PF00829 Ribosomal prokaryotic L21 protein E4N72_09480 PF01171 PP-loop family E4N72_09500 PF03471 Transporter associated domain E4N72_09500 PF00999 Sodium/hydrogen exchanger family E4N72_09500 PF02080 TrkA-C domain E4N72_09505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4N72_09505 PF02779 Transketolase, pyrimidine binding domain E4N72_09505 PF02780 Transketolase, C-terminal domain E4N72_09510 PF01263 Aldose 1-epimerase E4N72_09515 PF01991 ATP synthase (E/31 kDa) subunit E4N72_09525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N72_09525 PF16886 ATPsynthase alpha/beta subunit N-term extension E4N72_09525 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4N72_09530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N72_09530 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4N72_09535 PF01813 ATP synthase subunit D E4N72_09560 PF08279 HTH domain E4N72_09560 PF13280 WYL domain E4N72_09595 PF00004 ATPase family associated with various cellular activities (AAA) E4N72_09595 PF17862 AAA+ lid domain E4N72_09595 PF01434 Peptidase family M41 E4N72_09615 PF00113 Enolase, C-terminal TIM barrel domain E4N72_09615 PF03952 Enolase, N-terminal domain E4N72_09620 PF01042 Endoribonuclease L-PSP E4N72_09635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4N72_09640 PF17845 FbpC C-terminal regulatory nucleotide binding domain E4N72_09640 PF00005 ABC transporter E4N72_09645 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_09655 PF00994 Probable molybdopterin binding domain E4N72_09670 PF00700 Bacterial flagellin C-terminal helical region E4N72_09670 PF00669 Bacterial flagellin N-terminal helical region E4N72_09685 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4N72_09690 PF02504 Fatty acid synthesis protein E4N72_09695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4N72_09700 PF00730 HhH-GPD superfamily base excision DNA repair protein E4N72_09710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4N72_09710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4N72_09715 PF01266 FAD dependent oxidoreductase E4N72_09720 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N72_09720 PF04324 BFD-like [2Fe-2S] binding domain E4N72_09725 PF18755 Restriction Enzyme Adenine Methylase Associated E4N72_09725 PF01555 DNA methylase E4N72_09735 PF01336 OB-fold nucleic acid binding domain E4N72_09735 PF00152 tRNA synthetases class II (D, K and N) E4N72_09740 PF00156 Phosphoribosyl transferase domain E4N72_09745 PF02875 Mur ligase family, glutamate ligase domain E4N72_09745 PF08245 Mur ligase middle domain E4N72_09755 PF00005 ABC transporter E4N72_09755 PF00664 ABC transporter transmembrane region E4N72_09760 PF00005 ABC transporter E4N72_09775 PF03840 Preprotein translocase SecG subunit E4N72_09780 PF00563 EAL domain E4N72_09780 PF01590 GAF domain E4N72_09780 PF00990 Diguanylate cyclase, GGDEF domain E4N72_09780 PF00360 Phytochrome region E4N72_09785 PF00679 Elongation factor G C-terminus E4N72_09785 PF14492 Elongation Factor G, domain II E4N72_09785 PF03764 Elongation factor G, domain IV E4N72_09785 PF00009 Elongation factor Tu GTP binding domain E4N72_09785 PF03144 Elongation factor Tu domain 2 E4N72_09790 PF00365 Phosphofructokinase E4N72_09805 PF13393 Histidyl-tRNA synthetase E4N72_09810 PF00575 S1 RNA binding domain E4N72_09815 PF02954 Bacterial regulatory protein, Fis family E4N72_09815 PF00072 Response regulator receiver domain E4N72_09815 PF00158 Sigma-54 interaction domain E4N72_09830 PF00672 HAMP domain E4N72_09830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_09830 PF02743 Cache domain E4N72_09835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_09835 PF16591 Helical bimodular sensor domain E4N72_09835 PF00672 HAMP domain E4N72_09855 PF00572 Ribosomal protein L13 E4N72_09860 PF00380 Ribosomal protein S9/S16 E4N72_09865 PF02631 RecX family E4N72_09870 PF04536 TPM domain E4N72_09885 PF07687 Peptidase dimerisation domain E4N72_09885 PF01546 Peptidase family M20/M25/M40 E4N72_09890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4N72_09890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4N72_09895 PF00950 ABC 3 transport family E4N72_09905 PF02086 D12 class N6 adenine-specific DNA methyltransferase E4N72_09910 PF07650 KH domain E4N72_09910 PF01926 50S ribosome-binding GTPase E4N72_09915 PF04060 Putative Fe-S cluster E4N72_09920 PF02508 Rnf-Nqr subunit, membrane protein E4N72_09925 PF02508 Rnf-Nqr subunit, membrane protein E4N72_09930 PF04205 FMN-binding domain E4N72_09935 PF03116 NQR2, RnfD, RnfE family E4N72_09945 PF07055 Enoyl reductase FAD binding domain E4N72_09945 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4N72_09945 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4N72_09950 PF00364 Biotin-requiring enzyme E4N72_09955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4N72_09955 PF02785 Biotin carboxylase C-terminal domain E4N72_09955 PF00289 Biotin carboxylase, N-terminal domain E4N72_09960 PF01039 Carboxyl transferase domain E4N72_09965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4N72_09975 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_09980 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_10005 PF01979 Amidohydrolase family E4N72_10010 PF13382 Adenine deaminase C-terminal domain E4N72_10010 PF01979 Amidohydrolase family E4N72_10015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4N72_10015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4N72_10020 PF00941 FAD binding domain in molybdopterin dehydrogenase E4N72_10020 PF03450 CO dehydrogenase flavoprotein C-terminal domain E4N72_10025 PF00111 2Fe-2S iron-sulfur cluster binding domain E4N72_10025 PF01799 [2Fe-2S] binding domain E4N72_10030 PF04055 Radical SAM superfamily E4N72_10030 PF00919 Uncharacterized protein family UPF0004 E4N72_10045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E4N72_10045 PF00056 lactate/malate dehydrogenase, NAD binding domain E4N72_10050 PF17131 Outer membrane lipoprotein-sorting protein E4N72_10075 PF00892 EamA-like transporter family E4N72_10080 PF13460 NAD(P)H-binding E4N72_10085 PF01638 HxlR-like helix-turn-helix E4N72_10105 PF00005 ABC transporter E4N72_10105 PF17755 UvrA DNA-binding domain E4N72_10105 PF17760 UvrA interaction domain E4N72_10115 PF00664 ABC transporter transmembrane region E4N72_10115 PF00005 ABC transporter E4N72_10115 PF08021 Siderophore-interacting FAD-binding domain E4N72_10115 PF04954 Siderophore-interacting protein E4N72_10120 PF00664 ABC transporter transmembrane region E4N72_10120 PF00005 ABC transporter E4N72_10155 PF01527 Transposase E4N72_10160 PF09827 CRISPR associated protein Cas2 E4N72_10170 PF13395 HNH endonuclease E4N72_10170 PF18541 RuvC endonuclease subdomain 3 E4N72_10175 PF00440 Bacterial regulatory proteins, tetR family E4N72_10190 PF00005 ABC transporter E4N72_10200 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4N72_10225 PF01032 FecCD transport family E4N72_10230 PF00005 ABC transporter E4N72_10250 PF00005 ABC transporter E4N72_10275 PF00664 ABC transporter transmembrane region E4N72_10275 PF00005 ABC transporter E4N72_10290 PF07728 AAA domain (dynein-related subfamily) E4N72_10290 PF17868 AAA lid domain E4N72_10290 PF12592 Protein of unknown function (DUF3763) E4N72_10305 PF05762 VWA domain containing CoxE-like protein E4N72_10310 PF10114 Sensory domain found in PocR E4N72_10310 PF12833 Helix-turn-helix domain E4N72_10325 PF03601 Conserved hypothetical protein 698 E4N72_10475 PF00664 ABC transporter transmembrane region E4N72_10475 PF00005 ABC transporter E4N72_10490 PF00005 ABC transporter E4N72_10495 PF00664 ABC transporter transmembrane region E4N72_10495 PF00005 ABC transporter E4N72_10505 PF17932 Tetracyclin repressor-like, C-terminal domain E4N72_10505 PF00440 Bacterial regulatory proteins, tetR family E4N72_10520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4N72_10535 PF00210 Ferritin-like domain E4N72_10540 PF01161 Phosphatidylethanolamine-binding protein E4N72_10545 PF04471 Restriction endonuclease E4N72_10545 PF14338 Mrr N-terminal domain E4N72_10550 PF03960 ArsC family E4N72_10560 PF00005 ABC transporter E4N72_10575 PF18073 Rubredoxin metal binding domain E4N72_10575 PF06745 KaiC E4N72_10580 PF00595 PDZ domain E4N72_10585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_10585 PF00672 HAMP domain E4N72_10585 PF02743 Cache domain E4N72_10600 PF01202 Shikimate kinase E4N72_10610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_10610 PF02743 Cache domain E4N72_10610 PF00672 HAMP domain E4N72_10625 PF01475 Ferric uptake regulator family E4N72_10635 PF01252 Signal peptidase (SPase) II E4N72_10660 PF00293 NUDIX domain E4N72_10680 PF03793 PASTA domain E4N72_10680 PF03717 Penicillin-binding Protein dimerisation domain E4N72_10680 PF00905 Penicillin binding protein transpeptidase domain E4N72_10695 PF00072 Response regulator receiver domain E4N72_10700 PF00488 MutS domain V E4N72_10700 PF01713 Smr domain E4N72_10705 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4N72_10705 PF00933 Glycosyl hydrolase family 3 N terminal domain E4N72_10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N72_10725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4N72_10725 PF01926 50S ribosome-binding GTPase E4N72_10730 PF17863 AAA lid domain E4N72_10730 PF07726 ATPase family associated with various cellular activities (AAA) E4N72_10765 PF01008 Initiation factor 2 subunit family E4N72_10845 PF00436 Single-strand binding protein family E4N72_10850 PF03949 Malic enzyme, NAD binding domain E4N72_10850 PF00390 Malic enzyme, N-terminal domain E4N72_10890 PF01464 Transglycosylase SLT domain E4N72_10895 PF02673 Bacitracin resistance protein BacA E4N72_10900 PF01580 FtsK/SpoIIIE family E4N72_10900 PF09397 Ftsk gamma domain E4N72_10900 PF17854 FtsK alpha domain E4N72_10905 PF00474 Sodium:solute symporter family E4N72_10920 PF01029 NusB family E4N72_10925 PF13145 PPIC-type PPIASE domain E4N72_10930 PF01411 tRNA synthetases class II (A) E4N72_10930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4N72_10935 PF01026 TatD related DNase E4N72_10945 PF03330 Lytic transglycolase E4N72_10965 PF01370 NAD dependent epimerase/dehydratase family E4N72_11000 PF00005 ABC transporter E4N72_11040 PF01225 Mur ligase family, catalytic domain E4N72_11040 PF02875 Mur ligase family, glutamate ligase domain E4N72_11040 PF08245 Mur ligase middle domain E4N72_11050 PF10431 C-terminal, D2-small domain, of ClpB protein E4N72_11050 PF07724 AAA domain (Cdc48 subfamily) E4N72_11050 PF06689 ClpX C4-type zinc finger E4N72_11055 PF00574 Clp protease E4N72_11060 PF05698 Bacterial trigger factor protein (TF) C-terminus E4N72_11060 PF05697 Bacterial trigger factor protein (TF) E4N72_11060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4N72_11090 PF00990 Diguanylate cyclase, GGDEF domain E4N72_11095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4N72_11110 PF02465 Flagellar hook-associated protein 2 N-terminus E4N72_11110 PF07195 Flagellar hook-associated protein 2 C-terminus E4N72_11115 PF00669 Bacterial flagellin N-terminal helical region E4N72_11115 PF00700 Bacterial flagellin C-terminal helical region E4N72_11120 PF00669 Bacterial flagellin N-terminal helical region E4N72_11120 PF00700 Bacterial flagellin C-terminal helical region E4N72_11135 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4N72_11135 PF00271 Helicase conserved C-terminal domain E4N72_11135 PF04408 Helicase associated domain (HA2) E4N72_11135 PF00270 DEAD/DEAH box helicase E4N72_11145 PF01515 Phosphate acetyl/butaryl transferase E4N72_11150 PF01043 SecA preprotein cross-linking domain E4N72_11150 PF02810 SEC-C motif E4N72_11150 PF07517 SecA DEAD-like domain E4N72_11150 PF07516 SecA Wing and Scaffold domain E4N72_11165 PF02542 YgbB family E4N72_11170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4N72_11170 PF02542 YgbB family E4N72_11180 PF00005 ABC transporter E4N72_11180 PF00664 ABC transporter transmembrane region E4N72_11185 PF00005 ABC transporter E4N72_11185 PF00664 ABC transporter transmembrane region E4N72_11190 PF03193 RsgA GTPase E4N72_11195 PF01177 Asp/Glu/Hydantoin racemase E4N72_11225 PF00069 Protein kinase domain E4N72_11225 PF03793 PASTA domain E4N72_11240 PF01850 PIN domain E4N72_11245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4N72_11260 PF00149 Calcineurin-like phosphoesterase E4N72_11260 PF02872 5'-nucleotidase, C-terminal domain E4N72_11270 PF00672 HAMP domain E4N72_11270 PF02743 Cache domain E4N72_11270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_11275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_11275 PF02743 Cache domain E4N72_11275 PF00672 HAMP domain E4N72_11285 PF02743 Cache domain E4N72_11285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_11285 PF00672 HAMP domain E4N72_11310 PF01032 FecCD transport family E4N72_11315 PF00005 ABC transporter E4N72_11330 PF14572 Phosphoribosyl synthetase-associated domain E4N72_11330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4N72_11340 PF06874 Firmicute fructose-1,6-bisphosphatase E4N72_11345 PF00005 ABC transporter E4N72_11345 PF12848 ABC transporter E4N72_11365 PF00672 HAMP domain E4N72_11365 PF02743 Cache domain E4N72_11365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_11375 PF01106 NifU-like domain E4N72_11380 PF14492 Elongation Factor G, domain II E4N72_11380 PF00679 Elongation factor G C-terminus E4N72_11380 PF03144 Elongation factor Tu domain 2 E4N72_11380 PF00009 Elongation factor Tu GTP binding domain E4N72_11380 PF03764 Elongation factor G, domain IV E4N72_11405 PF00005 ABC transporter E4N72_11445 PF02743 Cache domain E4N72_11445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_11445 PF00672 HAMP domain E4N72_11485 PF00271 Helicase conserved C-terminal domain E4N72_11485 PF09369 Domain of unknown function (DUF1998) E4N72_11485 PF00270 DEAD/DEAH box helicase E4N72_11490 PF16921 Tex protein YqgF-like domain E4N72_11490 PF09371 Tex-like protein N-terminal domain E4N72_11490 PF00575 S1 RNA binding domain E4N72_11490 PF17674 HHH domain E4N72_11500 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4N72_11505 PF03129 Anticodon binding domain E4N72_11505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N72_11515 PF03009 Glycerophosphoryl diester phosphodiesterase family E4N72_11520 PF00672 HAMP domain E4N72_11520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_11520 PF02743 Cache domain E4N72_11555 PF00268 Ribonucleotide reductase, small chain E4N72_11570 PF03577 Peptidase family C69 E4N72_11595 PF00145 C-5 cytosine-specific DNA methylase E4N72_11600 PF13651 Adenine-specific methyltransferase EcoRI E4N72_11605 PF01022 Bacterial regulatory protein, arsR family E4N72_11610 PF00403 Heavy-metal-associated domain E4N72_11615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4N72_11615 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4N72_11630 PF05958 tRNA (Uracil-5-)-methyltransferase E4N72_11650 PF00155 Aminotransferase class I and II E4N72_11655 PF01370 NAD dependent epimerase/dehydratase family E4N72_11675 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4N72_11675 PF04552 Sigma-54, DNA binding domain E4N72_11675 PF04963 Sigma-54 factor, core binding domain E4N72_11690 PF00581 Rhodanese-like domain E4N72_11695 PF00557 Metallopeptidase family M24 E4N72_11700 PF00684 DnaJ central domain E4N72_11700 PF01556 DnaJ C terminal domain E4N72_11700 PF00226 DnaJ domain E4N72_11710 PF00092 von Willebrand factor type A domain E4N72_11735 PF01206 Sulfurtransferase TusA E4N72_11750 PF03459 TOBE domain E4N72_11750 PF17912 MalK OB fold domain E4N72_11750 PF00005 ABC transporter E4N72_11755 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_11760 PF00528 Binding-protein-dependent transport system inner membrane component E4N72_11765 PF13416 Bacterial extracellular solute-binding protein E4N72_11780 PF00534 Glycosyl transferases group 1 E4N72_11780 PF13439 Glycosyltransferase Family 4 E4N72_11785 PF00534 Glycosyl transferases group 1 E4N72_11785 PF13439 Glycosyltransferase Family 4 E4N72_11790 PF08525 Opacity-associated protein A N-terminal motif E4N72_11790 PF01551 Peptidase family M23 E4N72_11790 PF01476 LysM domain E4N72_11795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4N72_11795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4N72_11795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4N72_11795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4N72_11810 PF03773 Predicted permease E4N72_11815 PF01170 Putative RNA methylase family UPF0020 E4N72_11815 PF02926 THUMP domain E4N72_11825 PF09820 Predicted AAA-ATPase E4N72_11825 PF08011 PD-(D/E)XK nuclease superfamily E4N72_11840 PF00990 Diguanylate cyclase, GGDEF domain E4N72_11845 PF00563 EAL domain E4N72_11845 PF13426 PAS domain E4N72_11845 PF00990 Diguanylate cyclase, GGDEF domain E4N72_11850 PF06071 Protein of unknown function (DUF933) E4N72_11850 PF01926 50S ribosome-binding GTPase E4N72_11860 PF01554 MatE E4N72_11865 PF00005 ABC transporter E4N72_11865 PF00664 ABC transporter transmembrane region E4N72_11870 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4N72_11905 PF00664 ABC transporter transmembrane region E4N72_11905 PF00005 ABC transporter E4N72_11910 PF00183 Hsp90 protein E4N72_11915 PF08546 Ketopantoate reductase PanE/ApbA C terminal E4N72_11915 PF02558 Ketopantoate reductase PanE/ApbA E4N72_11925 PF01467 Cytidylyltransferase-like E4N72_11965 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4N72_11970 PF13361 UvrD-like helicase C-terminal domain E4N72_11970 PF12705 PD-(D/E)XK nuclease superfamily E4N72_11970 PF00580 UvrD/REP helicase N-terminal domain E4N72_11975 PF00664 ABC transporter transmembrane region E4N72_11975 PF00005 ABC transporter E4N72_11985 PF01121 Dephospho-CoA kinase E4N72_11995 PF04225 Opacity-associated protein A LysM-like domain E4N72_11995 PF01551 Peptidase family M23 E4N72_12000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N72_12000 PF00672 HAMP domain E4N72_12000 PF02743 Cache domain E4N72_12005 PF05525 Branched-chain amino acid transport protein E4N72_12010 PF01268 Formate--tetrahydrofolate ligase E4N72_12015 PF12804 MobA-like NTP transferase domain E4N72_12020 PF02028 BCCT, betaine/carnitine/choline family transporter E4N72_12025 PF00155 Aminotransferase class I and II