locus-tag	class	description
TrAFT101_000032	PF03807	NADP oxidoreductase coenzyme F420-dependent
TrAFT101_000032	PF14748	Pyrroline-5-carboxylate reductase dimerisation
TrAFT101_000048	PF00891	O-methyltransferase domain
TrAFT101_000070	PF00282	Pyridoxal-dependent decarboxylase conserved domain
TrAFT101_000071	PF00282	Pyridoxal-dependent decarboxylase conserved domain
TrAFT101_000090	PF12833	Helix-turn-helix domain
TrAFT101_000090	PF02805	Metal binding domain of Ada
TrAFT101_000113	PF00180	Isocitrate/isopropylmalate dehydrogenase
TrAFT101_000113	PF03737	Aldolase/RraA
TrAFT101_000226	PF08240	Alcohol dehydrogenase GroES-like domain
TrAFT101_000226	PF00107	Zinc-binding dehydrogenase
TrAFT101_000266	PF08240	Alcohol dehydrogenase GroES-like domain
TrAFT101_000266	PF00107	Zinc-binding dehydrogenase
TrAFT101_000355	PF00561	alpha/beta hydrolase fold
TrAFT101_000360	PF01179	Copper amine oxidase, enzyme domain
TrAFT101_000360	PF02728	Copper amine oxidase, N3 domain
TrAFT101_000363	PF00970	Oxidoreductase FAD-binding domain
TrAFT101_000363	PF00175	Oxidoreductase NAD-binding domain 
TrAFT101_000363	PF00042	Globin
TrAFT101_000432	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TrAFT101_000432	PF00205	Thiamine pyrophosphate enzyme, central domain
TrAFT101_000432	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TrAFT101_000507	PF00145	C-5 cytosine-specific DNA methylase
TrAFT101_000669	PF01931	Protein of unknown function DUF84
TrAFT101_000862	PF00294	pfkB family carbohydrate kinase
TrAFT101_000862	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
TrAFT101_000863	PF01872	RibD C-terminal domain
TrAFT101_000863	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
TrAFT101_001007	PF03583	Secretory lipase 
TrAFT101_001024	PF10609	NUBPL iron-transfer P-loop NTPase
TrAFT101_001260	PF07859	alpha/beta hydrolase fold
TrAFT101_001493	PF01842	ACT domain
TrAFT101_001493	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
TrAFT101_001493	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
TrAFT101_001669	PF02146	Sir2 family
TrAFT101_001707	PF00561	alpha/beta hydrolase fold
TrAFT101_001748	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
TrAFT101_001868	PF00701	Dihydrodipicolinate synthetase family
TrAFT101_002235	PF03747	ADP-ribosylglycohydrolase
TrAFT101_002285	PF07992	Pyridine nucleotide-disulphide oxidoreductase
TrAFT101_002287	PF01116	Fructose-bisphosphate aldolase class-II
TrAFT101_002314	PF03534	Salmonella virulence plasmid 65kDa B protein
TrAFT101_002314	PF12256	Insecticide toxin TcdB middle/N-terminal region
TrAFT101_002314	PF12255	Insecticide toxin TcdB middle/C-terminal region
TrAFT101_002315	PF18413	Neuraminidase-like domain
TrAFT101_002315	PF18276	Tc toxin complex TcA C-terminal TcB-binding domain
TrAFT101_002412	PF02805	Metal binding domain of Ada
TrAFT101_002412	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
TrAFT101_002412	PF12833	Helix-turn-helix domain
TrAFT101_002412	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
TrAFT101_002439	PF00106	short chain dehydrogenase
TrAFT101_002477	PF12697	Alpha/beta hydrolase family
TrAFT101_002588	PF02798	Glutathione S-transferase, N-terminal domain
TrAFT101_002641	PF01266	FAD dependent oxidoreductase
TrAFT101_002715	PF03702	Anhydro-N-acetylmuramic acid kinase
TrAFT101_002867	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
TrAFT101_002916	PF00108	Thiolase, N-terminal domain
TrAFT101_002916	PF02803	Thiolase, C-terminal domain
TrAFT101_003005	PF00248	Aldo/keto reductase family
TrAFT101_003038	PF02637	GatB domain
TrAFT101_003038	PF02934	GatB/GatE catalytic domain
TrAFT101_003111	PF04616	Glycosyl hydrolases family 43
TrAFT101_003111	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
TrAFT101_003139	PF08242	Methyltransferase domain
TrAFT101_003224	PF02594	Uncharacterised ACR, YggU family COG1872
TrAFT101_003326	PF00753	Metallo-beta-lactamase superfamily
TrAFT101_003326	PF16123	Hydroxyacylglutathione hydrolase C-terminus
TrAFT101_003593	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
TrAFT101_003633	PF00814	Glycoprotease family
TrAFT101_003661	PF00378	Enoyl-CoA hydratase/isomerase
TrAFT101_003768	PF07286	Protein of unknown function (DUF1445)
TrAFT101_003884	PF00011	Hsp20/alpha crystallin family
TrAFT101_004007	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
TrAFT101_004012	PF00226	DnaJ domain
TrAFT101_004012	PF00684	DnaJ central domain
TrAFT101_004012	PF01556	DnaJ C terminal domain
TrAFT101_004181	PF00082	Subtilase family
TrAFT101_004402	PF07690	Major Facilitator Superfamily
TrAFT101_004493	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
TrAFT101_004493	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
TrAFT101_004493	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
TrAFT101_004502	PF00005	ABC transporter
TrAFT101_004502	PF00664	ABC transporter transmembrane region
TrAFT101_004574	PF00668	Condensation domain
TrAFT101_004574	PF00550	Phosphopantetheine attachment site
TrAFT101_004574	PF13193	AMP-binding enzyme C-terminal domain
TrAFT101_004574	PF00501	AMP-binding enzyme
TrAFT101_004606	PF01425	Amidase
TrAFT101_004610	PF01791	DeoC/LacD family aldolase
TrAFT101_004620	PF00561	alpha/beta hydrolase fold
TrAFT101_004767	PF04229	GrpB protein
TrAFT101_005090	PF00012	Hsp70 protein
TrAFT101_005483	PF07690	Major Facilitator Superfamily
TrAFT101_005582	PF07690	Major Facilitator Superfamily
TrAFT101_005691	PF00701	Dihydrodipicolinate synthetase family
TrAFT101_005893	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
TrAFT101_005893	PF12833	Helix-turn-helix domain
TrAFT101_005893	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
TrAFT101_005893	PF02805	Metal binding domain of Ada
TrAFT101_006006	PF00348	Polyprenyl synthetase
TrAFT101_006163	PF07690	Major Facilitator Superfamily
TrAFT101_006171	PF03060	Nitronate monooxygenase
TrAFT101_006371	PF01261	Xylose isomerase-like TIM barrel
TrAFT101_006399	PF00150	Cellulase (glycosyl hydrolase family 5)
TrAFT101_006445	PF08531	Alpha-L-rhamnosidase N-terminal domain
TrAFT101_006445	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain
TrAFT101_006445	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
TrAFT101_006445	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain
TrAFT101_006447	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
TrAFT101_006464	PF00282	Pyridoxal-dependent decarboxylase conserved domain
TrAFT101_006491	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
TrAFT101_006491	PF12833	Helix-turn-helix domain
TrAFT101_006491	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
TrAFT101_006491	PF02805	Metal binding domain of Ada
TrAFT101_006515	PF01370	NAD dependent epimerase/dehydratase family
TrAFT101_006594	PF00144	Beta-lactamase
TrAFT101_006826	PF00890	FAD binding domain
TrAFT101_007173	PF00271	Helicase conserved C-terminal domain
TrAFT101_007173	PF00270	DEAD/DEAH box helicase
TrAFT101_007173	PF08148	DSHCT (NUC185) domain
TrAFT101_007231	PF08676	MutL C terminal dimerisation domain
TrAFT101_007231	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
TrAFT101_007231	PF01119	DNA mismatch repair protein, C-terminal domain
TrAFT101_007403	PF01557	Fumarylacetoacetate (FAA) hydrolase family
TrAFT101_007417	PF14698	Argininosuccinate lyase C-terminal
TrAFT101_007417	PF00206	Lyase
TrAFT101_007418	PF14698	Argininosuccinate lyase C-terminal
TrAFT101_007418	PF00206	Lyase
TrAFT101_007534	PF01513	ATP-NAD kinase
TrAFT101_007929	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
TrAFT101_007929	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
TrAFT101_007986	PF00561	alpha/beta hydrolase fold
TrAFT101_007986	PF08386	TAP-like protein
TrAFT101_008057	PF00107	Zinc-binding dehydrogenase
TrAFT101_008057	PF08240	Alcohol dehydrogenase GroES-like domain
TrAFT101_008099	PF00296	Luciferase-like monooxygenase
TrAFT101_008111	PF00291	Pyridoxal-phosphate dependent enzyme
TrAFT101_008112	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
TrAFT101_008112	PF07992	Pyridine nucleotide-disulphide oxidoreductase
TrAFT101_008124	PF07470	Glycosyl Hydrolase Family 88
TrAFT101_008179	PF07883	Cupin domain
TrAFT101_008191	PF00975	Thioesterase domain
TrAFT101_008191	PF00668	Condensation domain
TrAFT101_008191	PF08241	Methyltransferase domain
TrAFT101_008191	PF00391	PEP-utilising enzyme, mobile domain
TrAFT101_008191	PF00550	Phosphopantetheine attachment site
TrAFT101_008191	PF13193	AMP-binding enzyme C-terminal domain
TrAFT101_008191	PF00501	AMP-binding enzyme
TrAFT101_008193	PF00501	AMP-binding enzyme
TrAFT101_008193	PF13193	AMP-binding enzyme C-terminal domain
TrAFT101_008193	PF00668	Condensation domain
TrAFT101_008193	PF00550	Phosphopantetheine attachment site
TrAFT101_008194	PF12706	Beta-lactamase superfamily domain
TrAFT101_008204	PF00149	Calcineurin-like phosphoesterase
TrAFT101_008264	PF09587	Bacterial capsule synthesis protein PGA_cap
TrAFT101_008297	PF00108	Thiolase, N-terminal domain
TrAFT101_008297	PF02803	Thiolase, C-terminal domain
TrAFT101_008345	PF01040	UbiA prenyltransferase family
TrAFT101_008387	PF01425	Amidase
TrAFT101_008541	PF00171	Aldehyde dehydrogenase family
TrAFT101_008565	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
TrAFT101_008565	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
TrAFT101_008643	PF02492	CobW/HypB/UreG, nucleotide-binding domain
TrAFT101_008643	PF07683	Cobalamin synthesis protein cobW C-terminal domain
TrAFT101_008718	PF13816	Haem-containing dehydratase
TrAFT101_008760	PF00135	Carboxylesterase family
TrAFT101_009030	PF00043	Glutathione S-transferase, C-terminal domain
TrAFT101_009030	PF13417	Glutathione S-transferase, N-terminal domain
TrAFT101_009081	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
TrAFT101_009081	PF02403	Seryl-tRNA synthetase N-terminal domain
TrAFT101_009206	PF00226	DnaJ domain
TrAFT101_009206	PF01556	DnaJ C terminal domain
TrAFT101_009206	PF00684	DnaJ central domain
TrAFT101_009366	PF00085	Thioredoxin
TrAFT101_009383	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
TrAFT101_009383	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
TrAFT101_009405	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
TrAFT101_009429	PF08240	Alcohol dehydrogenase GroES-like domain
TrAFT101_009429	PF00107	Zinc-binding dehydrogenase
TrAFT101_009474	PF03583	Secretory lipase 
TrAFT101_009584	PF08531	Alpha-L-rhamnosidase N-terminal domain
TrAFT101_009584	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain
TrAFT101_009584	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain
TrAFT101_009584	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
TrAFT101_009595	PF02441	Flavoprotein
TrAFT101_009715	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
TrAFT101_009909	PF01507	Phosphoadenosine phosphosulfate reductase family
TrAFT101_010076	PF01596	O-methyltransferase
TrAFT101_010080	PF00106	short chain dehydrogenase
TrAFT101_010301	PF03099	Biotin/lipoate A/B protein ligase family
TrAFT101_010367	PF01220	Dehydroquinase class II
TrAFT101_010529	PF01613	Flavin reductase like domain
TrAFT101_010535	PF12146	Serine aminopeptidase, S33
TrAFT101_010587	PF00795	Carbon-nitrogen hydrolase
TrAFT101_010639	PF00561	alpha/beta hydrolase fold
TrAFT101_010702	PF00795	Carbon-nitrogen hydrolase
TrAFT101_010758	PF00743	Flavin-binding monooxygenase-like
TrAFT101_010764	PF00248	Aldo/keto reductase family
TrAFT101_010849	PF00106	short chain dehydrogenase
TrAFT101_010878	PF00106	short chain dehydrogenase
TrAFT101_011023	PF00282	Pyridoxal-dependent decarboxylase conserved domain
TrAFT101_011050	PF01370	NAD dependent epimerase/dehydratase family
TrAFT101_011054	PF00043	Glutathione S-transferase, C-terminal domain
TrAFT101_011054	PF02798	Glutathione S-transferase, N-terminal domain
TrAFT101_011172	PF00202	Aminotransferase class-III
TrAFT101_011229	PF00561	alpha/beta hydrolase fold
TrAFT101_011331	PF00958	GMP synthase C terminal domain
TrAFT101_011331	PF02540	NAD synthase
TrAFT101_011331	PF00117	Glutamine amidotransferase class-I
TrAFT101_011355	PF03704	Bacterial transcriptional activator domain
TrAFT101_011355	PF00486	Transcriptional regulatory protein, C terminal
TrAFT101_011355	PF00931	NB-ARC domain
TrAFT101_011361	PF07532	Bacterial Ig-like domain (group 4)
TrAFT101_011423	PF01063	Amino-transferase class IV
TrAFT101_011518	PF00106	short chain dehydrogenase
TrAFT101_011577	PF00011	Hsp20/alpha crystallin family
TrAFT101_011712	PF12894	Anaphase-promoting complex subunit 4 WD40 domain
TrAFT101_011712	PF00400	WD domain, G-beta repeat
TrAFT101_011880	PF08240	Alcohol dehydrogenase GroES-like domain
TrAFT101_011880	PF00107	Zinc-binding dehydrogenase
TrAFT101_011944	PF00561	alpha/beta hydrolase fold
TrAFT101_011945	PF00561	alpha/beta hydrolase fold
TrAFT101_011946	PF00561	alpha/beta hydrolase fold
TrAFT101_011946	PF08386	TAP-like protein
