locus-tag	class	description
TrAtP1_000019	COG0662	Cupin 2, conserved barrel domain protein
TrAtP1_000050	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
TrAtP1_000062	COG1902	pentaerythritol trinitrate reductase activity
TrAtP1_000083	COG1397	ADP-ribosylglycohydrolase
TrAtP1_000101	COG1216	Glycosyl transferase, family 2
TrAtP1_000136	COG5383	Protein conserved in bacteria
TrAtP1_000256	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_000267	COG1434	Gram-negative-bacterium-type cell wall biogenesis
TrAtP1_000287	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
TrAtP1_000296	COG0488	(ABC) transporter
TrAtP1_000653	COG0363	glucosamine-6-phosphate deaminase activity
TrAtP1_000782	COG0009	L-threonylcarbamoyladenylate synthase
TrAtP1_000978	COG0483	inositol monophosphate 1-phosphatase activity
TrAtP1_001058	COG0494	nUDIX hydrolase
TrAtP1_001080	COG2814	Major facilitator Superfamily
TrAtP1_001121	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TrAtP1_001212	COG0657	acetylesterase activity
TrAtP1_001213	COG0017	Asparaginyl-tRNA synthetase
TrAtP1_001489	COG0489	protein tyrosine kinase activity
TrAtP1_001534	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TrAtP1_001646	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TrAtP1_001683	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TrAtP1_001683	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TrAtP1_001710	COG3250	beta-galactosidase activity
TrAtP1_001712	COG1388	LysM domain
TrAtP1_001712	COG1705	Flagellar rod assembly protein muramidase FlgJ
TrAtP1_001842	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
TrAtP1_001936	COG0154	amidase activity
TrAtP1_002045	COG0515	serine threonine protein kinase
TrAtP1_002045	COG2815	serine threonine protein kinase
TrAtP1_002055	COG0644	oxidoreductase
TrAtP1_002167	COG0604	alcohol dehydrogenase
TrAtP1_002253	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TrAtP1_002253	COG1017	nitric oxide dioxygenase activity
TrAtP1_002347	COG2070	2-Nitropropane dioxygenase
TrAtP1_002394	COG3321	synthase
TrAtP1_002394	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_002394	COG0604	alcohol dehydrogenase
TrAtP1_002453	COG4221	oxidoreductase activity
TrAtP1_002502	COG1472	Belongs to the glycosyl hydrolase 3 family
TrAtP1_002533	COG1024	Enoyl-CoA hydratase
TrAtP1_002537	COG3938	Belongs to the proline racemase family
TrAtP1_002539	COG0531	amino acid
TrAtP1_002585	COG3268	Saccharopine dehydrogenase
TrAtP1_002621	COG2723	6-phospho-beta-galactosidase activity
TrAtP1_002631	COG2828	Protein conserved in bacteria
TrAtP1_002635	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrAtP1_002653	COG0402	S-adenosylhomocysteine deaminase activity
TrAtP1_002676	COG2986	histidine ammonia-lyase
TrAtP1_002706	COG2169	Transcriptional regulator
TrAtP1_002706	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TrAtP1_002712	COG0515	serine threonine protein kinase
TrAtP1_002743	COG0702	epimerase
TrAtP1_002890	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
TrAtP1_002919	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
TrAtP1_002950	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrAtP1_003006	COG0438	transferase activity, transferring glycosyl groups
TrAtP1_003031	COG0288	reversible hydration of carbon dioxide
TrAtP1_003103	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
TrAtP1_003220	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
TrAtP1_003545	COG0557	exoribonuclease II activity
TrAtP1_003580	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TrAtP1_003629	COG1012	belongs to the aldehyde dehydrogenase family
TrAtP1_003705	COG0101	tRNA pseudouridine synthase activity
TrAtP1_003715	COG1024	Enoyl-CoA hydratase
TrAtP1_003738	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
TrAtP1_003762	COG1222	aaa ATPase
TrAtP1_003792	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
TrAtP1_003864	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrAtP1_004025	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrAtP1_004028	COG5285	phytanoyl-CoA dioxygenase
TrAtP1_004095	COG2153	protein acetylation
TrAtP1_004184	COG0339	signal peptide processing
TrAtP1_004203	COG0513	Belongs to the DEAD box helicase family
TrAtP1_004228	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
TrAtP1_004276	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrAtP1_004277	COG1218	3'(2'),5'-bisphosphate nucleotidase
TrAtP1_004344	COG2890	protein-(glutamine-N5) methyltransferase activity
TrAtP1_004437	COG0673	inositol 2-dehydrogenase activity
TrAtP1_004516	COG1643	Atp-dependent helicase
TrAtP1_004544	COG0484	heat shock protein binding
TrAtP1_004585	COG0439	Biotin carboxylase
TrAtP1_004631	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
TrAtP1_004767	COG2351	hydroxyisourate hydrolase activity
TrAtP1_005018	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TrAtP1_005018	COG3320	Male sterility
TrAtP1_005019	COG0833	amino acid
TrAtP1_005052	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
TrAtP1_005071	COG2814	Major facilitator Superfamily
TrAtP1_005073	COG1228	amidohydrolase
TrAtP1_005143	COG1404	Belongs to the peptidase S8 family
TrAtP1_005172	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TrAtP1_005173	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_005205	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TrAtP1_005242	COG3507	Belongs to the glycosyl hydrolase 43 family
TrAtP1_005292	COG0402	S-adenosylhomocysteine deaminase activity
TrAtP1_005303	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TrAtP1_005346	COG0129	dihydroxy-acid dehydratase activity
TrAtP1_005440	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TrAtP1_005505	COG3509	depolymerase
TrAtP1_005766	COG0443	Heat shock 70 kDa protein
TrAtP1_005927	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_005967	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
TrAtP1_005967	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TrAtP1_006258	COG1335	isochorismatase
TrAtP1_006315	COG2072	flavoprotein involved in K transport
TrAtP1_006316	COG2072	flavoprotein involved in K transport
TrAtP1_006396	COG1012	belongs to the aldehyde dehydrogenase family
TrAtP1_006429	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrAtP1_006522	COG0513	Belongs to the DEAD box helicase family
TrAtP1_006539	COG1012	belongs to the aldehyde dehydrogenase family
TrAtP1_006559	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
TrAtP1_006594	COG2815	serine threonine protein kinase
TrAtP1_006594	COG0515	serine threonine protein kinase
TrAtP1_006632	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
TrAtP1_006656	COG2169	Transcriptional regulator
TrAtP1_006656	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TrAtP1_006784	COG0142	geranyltranstransferase activity
TrAtP1_006946	COG1073	alpha beta
TrAtP1_007048	COG1643	Atp-dependent helicase
TrAtP1_007083	COG1228	amidohydrolase
TrAtP1_007089	COG0405	Gamma-glutamyltransferase
TrAtP1_007116	COG0625	glutathione transferase activity
TrAtP1_007195	COG0302	gtp cyclohydrolase
TrAtP1_007253	COG1794	racemase activity, acting on amino acids and derivatives
TrAtP1_007309	COG0604	alcohol dehydrogenase
TrAtP1_007398	COG2267	carboxylic ester hydrolase activity
TrAtP1_007425	COG0673	inositol 2-dehydrogenase activity
TrAtP1_007427	COG0473	3-isopropylmalate dehydrogenase activity
TrAtP1_007428	COG0596	Alpha beta hydrolase
TrAtP1_007431	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_007448	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
TrAtP1_007449	COG0798	PFAM Bile acid sodium symporter
TrAtP1_007466	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TrAtP1_007545	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
TrAtP1_007561	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TrAtP1_007569	COG1012	belongs to the aldehyde dehydrogenase family
TrAtP1_007582	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TrAtP1_007588	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
TrAtP1_007605	COG0656	L-ascorbic acid biosynthetic process
TrAtP1_007762	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
TrAtP1_007789	COG0833	amino acid
TrAtP1_007853	COG0542	response to heat
TrAtP1_007865	COG0513	Belongs to the DEAD box helicase family
TrAtP1_007881	COG1794	racemase activity, acting on amino acids and derivatives
TrAtP1_007941	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
TrAtP1_007991	COG0123	including yeast histone deacetylase and acetoin utilization protein
TrAtP1_007994	COG1643	Atp-dependent helicase
TrAtP1_008143	COG1872	DUF167
TrAtP1_008221	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrAtP1_008239	COG0500	methyltransferase
TrAtP1_008249	COG0667	Aldo Keto reductase
TrAtP1_008253	COG2814	Major facilitator Superfamily
TrAtP1_008298	COG0017	Asparaginyl-tRNA synthetase
TrAtP1_008394	COG0656	L-ascorbic acid biosynthetic process
TrAtP1_008485	COG0183	Belongs to the thiolase family
TrAtP1_008528	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
TrAtP1_008610	COG2217	Heavy metal translocating P-type atpase
TrAtP1_008631	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TrAtP1_008656	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
TrAtP1_008659	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TrAtP1_008721	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
TrAtP1_008726	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrAtP1_008730	COG0657	acetylesterase activity
TrAtP1_008739	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
TrAtP1_008862	COG1902	pentaerythritol trinitrate reductase activity
TrAtP1_008988	COG1063	alcohol dehydrogenase
TrAtP1_009004	COG3527	Alpha-acetolactate decarboxylase
TrAtP1_009042	COG4221	oxidoreductase activity
TrAtP1_009265	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TrAtP1_009300	COG2272	Belongs to the type-B carboxylesterase lipase family
TrAtP1_009345	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
TrAtP1_009436	COG2140	Oxalate decarboxylase
TrAtP1_009546	COG0300	oxidoreductase activity
TrAtP1_009626	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TrAtP1_009627	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
TrAtP1_009777	COG0515	serine threonine protein kinase
TrAtP1_009777	COG2815	serine threonine protein kinase
TrAtP1_009805	COG0445	tRNA wobble uridine modification
TrAtP1_009856	COG2124	cytochrome p450
TrAtP1_009934	COG2808	Putative FMN-binding domain
TrAtP1_009953	COG2226	methyltransferase
TrAtP1_009970	COG3119	arylsulfatase activity
TrAtP1_010082	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrAtP1_010116	COG2814	Major facilitator Superfamily
TrAtP1_010128	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_010224	COG3177	Filamentation induced by cAMP protein fic
TrAtP1_010224	COG0666	response to abiotic stimulus
TrAtP1_010383	COG4221	oxidoreductase activity
TrAtP1_010386	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
TrAtP1_010386	COG2124	cytochrome p450
TrAtP1_010391	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
TrAtP1_010402	COG0047	phosphoribosylformylglycinamidine synthase activity
TrAtP1_010402	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
TrAtP1_010502	COG0625	glutathione transferase activity
TrAtP1_010559	COG3961	Belongs to the TPP enzyme family
TrAtP1_010570	COG2267	carboxylic ester hydrolase activity
TrAtP1_010633	COG1073	alpha beta
TrAtP1_010666	COG1335	isochorismatase
TrAtP1_010728	COG0193	aminoacyl-tRNA hydrolase activity
TrAtP1_010794	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
TrAtP1_010845	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrAtP1_010852	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_010862	COG0431	NADPH-dependent FMN reductase
TrAtP1_010868	COG1250	3-hydroxyacyl-CoA dehydrogenase
TrAtP1_010868	COG1024	Enoyl-CoA hydratase
TrAtP1_010884	COG0484	heat shock protein binding
TrAtP1_011057	COG2815	serine threonine protein kinase
TrAtP1_011057	COG0515	serine threonine protein kinase
TrAtP1_011091	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
TrAtP1_011116	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
TrAtP1_011342	COG2272	Belongs to the type-B carboxylesterase lipase family
TrAtP1_011381	COG0626	cystathionine gamma-synthase activity
TrAtP1_011440	COG0512	Glutamine amidotransferase of anthranilate synthase
TrAtP1_011479	COG0523	cobalamin synthesis protein
TrAtP1_011499	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrAtP1_011583	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrAtP1_011702	COG2175	clavaminate synthase activity
TrAtP1_011754	COG0154	amidase activity
TrAtP1_011766	COG0131	Imidazoleglycerol-phosphate dehydratase
TrAtP1_011776	COG1643	Atp-dependent helicase
TrAtP1_011799	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TrAtP1_011838	COG0181	hydroxymethylbilane synthase activity
TrAtP1_011882	COG2843	Capsule synthesis protein
TrAtP1_011915	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TrAtP1_012023	COG1335	isochorismatase
TrAtP1_012032	COG2084	Dehydrogenase
TrAtP1_012053	COG2132	Multicopper oxidase
TrAtP1_012076	COG1028	Short-chain dehydrogenase reductase Sdr
TrAtP1_012113	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrAtP1_012162	COG1073	alpha beta
TrAtP1_012169	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TrAtP1_012173	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrAtP1_012173	COG3153	acetyltransferase
TrAtP1_012197	COG0833	amino acid
TrAtP1_012251	COG1022	Amp-dependent synthetase and ligase
TrAtP1_012326	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
TrAtP1_012343	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
TrAtP1_012379	COG0542	response to heat
TrAtP1_012422	COG0321	lipoyl(octanoyl) transferase activity
TrAtP1_012548	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
TrAtP1_012652	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TrAtP1_012663	COG4122	O-methyltransferase activity
TrAtP1_012695	COG2837	iron assimilation
TrAtP1_012794	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
TrAtP1_012837	COG0560	Phosphoserine phosphatase
TrAtP1_012837	COG3830	Belongs to the UPF0237 family
TrAtP1_012840	COG0175	sulfate reduction
TrAtP1_012962	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TrAtP1_012990	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TrAtP1_012990	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TrAtP1_013044	COG0823	Involved in the tonB-independent uptake of proteins
TrAtP1_013072	COG0667	Aldo Keto reductase
TrAtP1_013091	COG1643	Atp-dependent helicase
TrAtP1_013092	COG1643	Atp-dependent helicase
TrAtP1_013098	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TrAtP1_013178	COG0571	ribonuclease III activity
TrAtP1_013193	COG1024	Enoyl-CoA hydratase
TrAtP1_013237	COG4106	trans-aconitate 2-methyltransferase activity
TrAtP1_013274	COG1064	alcohol dehydrogenase