locus-tag	class	description
TrVFT333_000093	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
TrVFT333_000110	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TrVFT333_000127	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TrVFT333_000150	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_000153	COG2843	Capsule synthesis protein
TrVFT333_000185	COG0181	hydroxymethylbilane synthase activity
TrVFT333_000213	COG2070	2-Nitropropane dioxygenase
TrVFT333_000240	COG0154	amidase activity
TrVFT333_000367	COG1012	belongs to the aldehyde dehydrogenase family
TrVFT333_000475	COG0454	-acetyltransferase
TrVFT333_000475	COG0456	acetyltransferase
TrVFT333_000489	COG0523	cobalamin synthesis protein
TrVFT333_000508	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrVFT333_000576	COG2272	Belongs to the type-B carboxylesterase lipase family
TrVFT333_000669	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TrVFT333_000854	COG0626	cystathionine gamma-synthase activity
TrVFT333_000869	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TrVFT333_000884	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TrVFT333_000963	COG3961	Belongs to the TPP enzyme family
TrVFT333_001011	COG0183	Belongs to the thiolase family
TrVFT333_001022	COG0706	membrane insertase activity
TrVFT333_001076	COG0227	Belongs to the bacterial ribosomal protein bL28 family
TrVFT333_001103	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
TrVFT333_001134	COG0626	cystathionine gamma-synthase activity
TrVFT333_001211	COG0657	acetylesterase activity
TrVFT333_001271	COG0194	GDP metabolic process
TrVFT333_001332	COG2030	dehydratase
TrVFT333_001451	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
TrVFT333_001461	COG0489	protein tyrosine kinase activity
TrVFT333_001503	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TrVFT333_001568	COG1119	ATPase activity
TrVFT333_001580	COG0017	Asparaginyl-tRNA synthetase
TrVFT333_001581	COG0513	Belongs to the DEAD box helicase family
TrVFT333_001619	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TrVFT333_001619	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TrVFT333_001795	COG0417	DNA replication proofreading
TrVFT333_001914	COG0644	oxidoreductase
TrVFT333_001980	COG0477	Major facilitator Superfamily
TrVFT333_001980	COG2814	Major facilitator Superfamily
TrVFT333_001985	COG0596	Alpha beta hydrolase
TrVFT333_002009	COG2814	Major facilitator Superfamily
TrVFT333_002013	COG3961	Belongs to the TPP enzyme family
TrVFT333_002022	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_002084	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TrVFT333_002084	COG1017	nitric oxide dioxygenase activity
TrVFT333_002085	COG0596	Alpha beta hydrolase
TrVFT333_002136	COG0154	amidase activity
TrVFT333_002165	COG0419	ATPase involved in DNA repair
TrVFT333_002180	COG2814	Major facilitator Superfamily
TrVFT333_002238	COG1024	Enoyl-CoA hydratase
TrVFT333_002265	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TrVFT333_002271	COG1960	acyl-CoA dehydrogenase activity
TrVFT333_002288	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TrVFT333_002330	COG1397	ADP-ribosylglycohydrolase
TrVFT333_002331	COG2814	Major facilitator Superfamily
TrVFT333_002350	COG0251	oxidation-reduction process
TrVFT333_002355	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TrVFT333_002379	COG1902	pentaerythritol trinitrate reductase activity
TrVFT333_002397	COG2072	flavoprotein involved in K transport
TrVFT333_002402	COG0473	3-isopropylmalate dehydrogenase activity
TrVFT333_002402	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
TrVFT333_002405	COG0508	dehydrogenase complex catalyzes the overall conversion of
TrVFT333_002405	COG0596	Alpha beta hydrolase
TrVFT333_002417	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_002498	COG1132	(ABC) transporter
TrVFT333_002519	COG2146	nitrite reductase [NAD(P)H] activity
TrVFT333_002519	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TrVFT333_002537	COG1335	isochorismatase
TrVFT333_002599	COG1228	amidohydrolase
TrVFT333_002616	COG0596	Alpha beta hydrolase
TrVFT333_002651	COG1643	Atp-dependent helicase
TrVFT333_002670	COG0285	dihydrofolate synthase activity
TrVFT333_002712	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_002775	COG3903	Transcriptional regulator
TrVFT333_002775	COG3629	intracellular signal transduction
TrVFT333_002828	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TrVFT333_002900	COG0142	geranyltranstransferase activity
TrVFT333_003006	COG2169	Transcriptional regulator
TrVFT333_003006	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TrVFT333_003091	COG0513	Belongs to the DEAD box helicase family
TrVFT333_003184	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrVFT333_003240	COG1024	Enoyl-CoA hydratase
TrVFT333_003267	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
TrVFT333_003286	COG4122	O-methyltransferase activity
TrVFT333_003345	COG0515	serine threonine protein kinase
TrVFT333_003598	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
TrVFT333_003644	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
TrVFT333_003644	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TrVFT333_003686	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_003741	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TrVFT333_003826	COG1872	DUF167
TrVFT333_003842	COG1388	LysM domain
TrVFT333_003842	COG3942	CHAP domain
TrVFT333_003883	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrVFT333_003906	COG0667	Aldo Keto reductase
TrVFT333_003915	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TrVFT333_003927	COG1012	belongs to the aldehyde dehydrogenase family
TrVFT333_003929	COG3507	Belongs to the glycosyl hydrolase 43 family
TrVFT333_003959	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrVFT333_004015	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrVFT333_004025	COG0656	L-ascorbic acid biosynthetic process
TrVFT333_004106	COG0183	Belongs to the thiolase family
TrVFT333_004119	COG0006	proline dipeptidase activity
TrVFT333_004155	COG0037	tRNA processing
TrVFT333_004183	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TrVFT333_004184	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TrVFT333_004207	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TrVFT333_004244	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
TrVFT333_004263	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrVFT333_004270	COG1131	(ABC) transporter
TrVFT333_004270	COG1716	ATPase activity
TrVFT333_004270	COG0842	Transport permease protein
TrVFT333_004271	COG0842	Transport permease protein
TrVFT333_004271	COG1131	(ABC) transporter
TrVFT333_004271	COG1716	ATPase activity
TrVFT333_004272	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
TrVFT333_004348	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_004465	COG0667	Aldo Keto reductase
TrVFT333_004475	COG1546	Belongs to the CinA family
TrVFT333_004475	COG1058	Belongs to the CinA family
TrVFT333_004481	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_004502	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_004507	COG0657	acetylesterase activity
TrVFT333_004545	COG1252	NADH dehydrogenase
TrVFT333_004591	COG0439	Biotin carboxylase
TrVFT333_004610	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_004647	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TrVFT333_004647	COG0574	Belongs to the PEP-utilizing enzyme family
TrVFT333_004658	COG1194	a g-specific adenine glycosylase
TrVFT333_004751	COG1228	amidohydrolase
TrVFT333_004752	COG0405	Gamma-glutamyltransferase
TrVFT333_004753	COG2814	Major facilitator Superfamily
TrVFT333_004762	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
TrVFT333_004775	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_004777	COG2070	2-Nitropropane dioxygenase
TrVFT333_004793	COG2814	Major facilitator Superfamily
TrVFT333_004796	COG1252	NADH dehydrogenase
TrVFT333_004799	COG0833	amino acid
TrVFT333_004898	COG0339	signal peptide processing
TrVFT333_004956	COG3185	4-Hydroxyphenylpyruvate dioxygenase
TrVFT333_004974	COG2153	protein acetylation
TrVFT333_005067	COG0515	serine threonine protein kinase
TrVFT333_005126	COG1234	tRNA 3'-trailer cleavage
TrVFT333_005221	COG2890	protein-(glutamine-N5) methyltransferase activity
TrVFT333_005381	COG1643	Atp-dependent helicase
TrVFT333_005427	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TrVFT333_005436	COG0484	heat shock protein binding
TrVFT333_005440	COG1902	pentaerythritol trinitrate reductase activity
TrVFT333_005565	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TrVFT333_005611	COG3153	acetyltransferase
TrVFT333_005611	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrVFT333_005644	COG2351	hydroxyisourate hydrolase activity
TrVFT333_005720	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
TrVFT333_005784	COG0515	serine threonine protein kinase
TrVFT333_005792	COG1643	Atp-dependent helicase
TrVFT333_005827	COG0180	Tryptophanyl-tRNA synthetase
TrVFT333_005891	COG3119	arylsulfatase activity
TrVFT333_006045	COG4221	oxidoreductase activity
TrVFT333_006166	COG0076	glutamate decarboxylase activity
TrVFT333_006184	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_006244	COG4221	oxidoreductase activity
TrVFT333_006292	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TrVFT333_006294	COG3772	lysozyme
TrVFT333_006296	COG2267	carboxylic ester hydrolase activity
TrVFT333_006338	COG0625	glutathione transferase activity
TrVFT333_006363	COG0191	fructose-bisphosphate aldolase activity
TrVFT333_006364	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TrVFT333_006372	COG0656	L-ascorbic acid biosynthetic process
TrVFT333_006437	COG1053	succinate dehydrogenase
TrVFT333_006507	COG2271	Major facilitator Superfamily
TrVFT333_006514	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
TrVFT333_006523	COG1063	alcohol dehydrogenase
TrVFT333_006534	COG0596	Alpha beta hydrolase
TrVFT333_006575	COG0402	S-adenosylhomocysteine deaminase activity
TrVFT333_006610	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TrVFT333_006683	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TrVFT333_006747	COG0515	serine threonine protein kinase
TrVFT333_006747	COG2815	serine threonine protein kinase
TrVFT333_006748	COG0662	Cupin 2, conserved barrel domain protein
TrVFT333_006768	COG0156	8-amino-7-oxononanoate synthase activity
TrVFT333_006859	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
TrVFT333_006883	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
TrVFT333_006910	COG1793	dna ligase
TrVFT333_006940	COG2814	Major facilitator Superfamily
TrVFT333_006992	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrVFT333_007170	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
TrVFT333_007171	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TrVFT333_007179	COG0154	amidase activity
TrVFT333_007247	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
TrVFT333_007292	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
TrVFT333_007299	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
TrVFT333_007304	COG0513	Belongs to the DEAD box helicase family
TrVFT333_007312	COG3265	gluconokinase activity
TrVFT333_007394	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrVFT333_007435	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_007452	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_007537	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
TrVFT333_007563	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TrVFT333_007573	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
TrVFT333_007628	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TrVFT333_007646	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
TrVFT333_007648	COG3537	Alpha-1,2-mannosidase
TrVFT333_007649	COG1063	alcohol dehydrogenase
TrVFT333_007662	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_007665	COG0596	Alpha beta hydrolase
TrVFT333_007666	COG0473	3-isopropylmalate dehydrogenase activity
TrVFT333_007677	COG4221	oxidoreductase activity
TrVFT333_007689	COG0167	dihydroorotate dehydrogenase activity
TrVFT333_007731	COG0318	PFAM AMP-dependent synthetase and ligase
TrVFT333_007737	COG3961	Belongs to the TPP enzyme family
TrVFT333_007799	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_007839	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TrVFT333_007840	COG1472	Belongs to the glycosyl hydrolase 3 family
TrVFT333_007861	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
TrVFT333_007873	COG0477	Major facilitator Superfamily
TrVFT333_007873	COG2814	Major facilitator Superfamily
TrVFT333_007875	COG3661	Belongs to the glycosyl hydrolase 67 family
TrVFT333_007935	COG3250	beta-galactosidase activity
TrVFT333_007945	COG2828	Protein conserved in bacteria
TrVFT333_007983	COG0302	gtp cyclohydrolase
TrVFT333_008020	COG1397	ADP-ribosylglycohydrolase
TrVFT333_008083	COG1418	mRNA catabolic process
TrVFT333_008103	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_008156	COG1434	Gram-negative-bacterium-type cell wall biogenesis
TrVFT333_008174	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
TrVFT333_008186	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
TrVFT333_008352	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
TrVFT333_008364	COG0513	Belongs to the DEAD box helicase family
TrVFT333_008426	COG0174	glutamine synthetase
TrVFT333_008435	COG0363	glucosamine-6-phosphate deaminase activity
TrVFT333_008449	COG2272	Belongs to the type-B carboxylesterase lipase family
TrVFT333_008460	COG0513	Belongs to the DEAD box helicase family
TrVFT333_008714	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TrVFT333_008740	COG0483	inositol monophosphate 1-phosphatase activity
TrVFT333_008813	COG0494	nUDIX hydrolase
TrVFT333_008971	COG2815	serine threonine protein kinase
TrVFT333_008971	COG0515	serine threonine protein kinase
TrVFT333_008973	COG0321	lipoyl(octanoyl) transferase activity
TrVFT333_008998	COG2828	Protein conserved in bacteria
TrVFT333_009077	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
TrVFT333_009153	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
TrVFT333_009164	COG0833	amino acid
TrVFT333_009231	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TrVFT333_009231	COG1017	nitric oxide dioxygenase activity
TrVFT333_009233	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_009257	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrVFT333_009265	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
TrVFT333_009270	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
TrVFT333_009271	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_009300	COG0672	)-iron permease
TrVFT333_009316	COG1368	sulfuric ester hydrolase activity
TrVFT333_009331	COG2084	Dehydrogenase
TrVFT333_009348	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TrVFT333_009416	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
TrVFT333_009439	COG3321	synthase
TrVFT333_009439	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
TrVFT333_009439	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TrVFT333_009439	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TrVFT333_009454	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TrVFT333_009471	COG0076	glutamate decarboxylase activity
TrVFT333_009479	COG0406	alpha-ribazole phosphatase activity
TrVFT333_009484	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TrVFT333_009487	COG0473	3-isopropylmalate dehydrogenase activity
TrVFT333_009496	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TrVFT333_009508	COG0154	amidase activity
TrVFT333_009530	COG2814	Major facilitator Superfamily
TrVFT333_009535	COG0300	oxidoreductase activity
TrVFT333_009649	COG0657	acetylesterase activity
TrVFT333_009682	COG2015	COG2015, Alkyl sulfatase and related hydrolases
TrVFT333_009684	COG2272	Belongs to the type-B carboxylesterase lipase family
TrVFT333_009743	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
TrVFT333_009848	COG0513	Belongs to the DEAD box helicase family
TrVFT333_009882	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
TrVFT333_009916	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
TrVFT333_010053	COG2837	iron assimilation
TrVFT333_010135	COG0667	Aldo Keto reductase
TrVFT333_010146	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
TrVFT333_010184	COG3830	Belongs to the UPF0237 family
TrVFT333_010184	COG0560	Phosphoserine phosphatase
TrVFT333_010187	COG0175	sulfate reduction
TrVFT333_010314	COG1131	(ABC) transporter
TrVFT333_010388	COG0823	Involved in the tonB-independent uptake of proteins
TrVFT333_010408	COG0277	FAD linked oxidase domain protein
TrVFT333_010444	COG1643	Atp-dependent helicase
TrVFT333_010454	COG1073	alpha beta
TrVFT333_010456	COG1073	alpha beta
TrVFT333_010459	COG3791	Glutathione-dependent formaldehyde-activating
TrVFT333_010466	COG0477	Major facilitator Superfamily
TrVFT333_010499	COG3903	Transcriptional regulator
TrVFT333_010499	COG3629	intracellular signal transduction
TrVFT333_010504	COG0277	FAD linked oxidase domain protein
TrVFT333_010519	COG0163	prenyltransferase activity
TrVFT333_010543	COG1024	Enoyl-CoA hydratase
TrVFT333_010563	COG0515	serine threonine protein kinase
TrVFT333_010563	COG2815	serine threonine protein kinase
TrVFT333_010574	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TrVFT333_010578	COG4106	trans-aconitate 2-methyltransferase activity
TrVFT333_010602	COG2267	carboxylic ester hydrolase activity
TrVFT333_010635	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_010640	COG0154	amidase activity
TrVFT333_010685	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_010691	COG2226	methyltransferase
TrVFT333_010698	COG2130	NADP-dependent
TrVFT333_010705	COG0531	amino acid
TrVFT333_010725	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TrVFT333_010778	COG0702	epimerase
TrVFT333_010894	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
TrVFT333_011063	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
TrVFT333_011073	COG3437	response regulator, receiver
TrVFT333_011073	COG3850	Histidine kinase
TrVFT333_011073	COG2205	protein histidine kinase activity
TrVFT333_011073	COG4999	Histidine kinase
TrVFT333_011075	COG0129	dihydroxy-acid dehydratase activity
TrVFT333_011093	COG1028	Short-chain dehydrogenase reductase Sdr
TrVFT333_011126	COG0517	IMP dehydrogenase activity
TrVFT333_011126	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
TrVFT333_011157	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
TrVFT333_011207	COG2890	protein-(glutamine-N5) methyltransferase activity
TrVFT333_011275	COG1160	GTP binding
TrVFT333_011284	COG2072	flavoprotein involved in K transport
TrVFT333_011313	COG4555	ABC transporter
TrVFT333_011345	COG0829	nickel cation binding
TrVFT333_011348	COG3119	arylsulfatase activity
TrVFT333_011357	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
TrVFT333_011381	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
TrVFT333_011385	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
TrVFT333_011414	COG2815	serine threonine protein kinase
TrVFT333_011414	COG0515	serine threonine protein kinase
TrVFT333_011419	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TrVFT333_011510	COG1132	(ABC) transporter
TrVFT333_011621	COG0431	NADPH-dependent FMN reductase
TrVFT333_011654	COG1228	amidohydrolase
TrVFT333_011656	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
TrVFT333_011697	COG0402	S-adenosylhomocysteine deaminase activity
TrVFT333_011719	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
TrVFT333_011739	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TrVFT333_011763	COG0193	aminoacyl-tRNA hydrolase activity
TrVFT333_011780	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
TrVFT333_011800	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TrVFT333_011802	COG0673	inositol 2-dehydrogenase activity
TrVFT333_011835	COG1902	pentaerythritol trinitrate reductase activity
TrVFT333_011848	COG0596	Alpha beta hydrolase