locus-tag	class	description
TrVGV298_000047	COG0277	FAD linked oxidase domain protein
TrVGV298_000063	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
TrVGV298_000094	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TrVGV298_000116	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_000119	COG2843	Capsule synthesis protein
TrVGV298_000152	COG0181	hydroxymethylbilane synthase activity
TrVGV298_000181	COG2070	2-Nitropropane dioxygenase
TrVGV298_000197	COG1643	Atp-dependent helicase
TrVGV298_000210	COG0154	amidase activity
TrVGV298_000228	COG2175	clavaminate synthase activity
TrVGV298_000342	COG1012	belongs to the aldehyde dehydrogenase family
TrVGV298_000454	COG0454	-acetyltransferase
TrVGV298_000454	COG0456	acetyltransferase
TrVGV298_000469	COG0523	cobalamin synthesis protein
TrVGV298_000486	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrVGV298_000559	COG2272	Belongs to the type-B carboxylesterase lipase family
TrVGV298_000678	COG0724	RNA recognition motif
TrVGV298_000796	COG4581	dead DEAH box helicase
TrVGV298_000839	COG0626	cystathionine gamma-synthase activity
TrVGV298_000853	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TrVGV298_000867	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TrVGV298_000947	COG3961	Belongs to the TPP enzyme family
TrVGV298_000992	COG0183	Belongs to the thiolase family
TrVGV298_001003	COG0706	membrane insertase activity
TrVGV298_001021	COG1222	aaa ATPase
TrVGV298_001038	COG0151	Belongs to the GarS family
TrVGV298_001060	COG0227	Belongs to the bacterial ribosomal protein bL28 family
TrVGV298_001090	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
TrVGV298_001121	COG0626	cystathionine gamma-synthase activity
TrVGV298_001202	COG0657	acetylesterase activity
TrVGV298_001203	COG0017	Asparaginyl-tRNA synthetase
TrVGV298_001323	COG2030	dehydratase
TrVGV298_001389	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
TrVGV298_001455	COG0489	protein tyrosine kinase activity
TrVGV298_001495	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TrVGV298_001562	COG1119	ATPase activity
TrVGV298_001615	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TrVGV298_001615	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TrVGV298_001915	COG2815	serine threonine protein kinase
TrVGV298_001915	COG0515	serine threonine protein kinase
TrVGV298_001921	COG0644	oxidoreductase
TrVGV298_001987	COG2814	Major facilitator Superfamily
TrVGV298_001987	COG0477	Major facilitator Superfamily
TrVGV298_001993	COG0596	Alpha beta hydrolase
TrVGV298_002016	COG4221	oxidoreductase activity
TrVGV298_002016	COG0604	alcohol dehydrogenase
TrVGV298_002016	COG3321	synthase
TrVGV298_002016	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TrVGV298_002020	COG3961	Belongs to the TPP enzyme family
TrVGV298_002029	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_002047	COG0366	Alpha amylase catalytic
TrVGV298_002092	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TrVGV298_002092	COG1017	nitric oxide dioxygenase activity
TrVGV298_002093	COG0596	Alpha beta hydrolase
TrVGV298_002146	COG0154	amidase activity
TrVGV298_002172	COG0419	ATPase involved in DNA repair
TrVGV298_002187	COG2814	Major facilitator Superfamily
TrVGV298_002234	COG0833	amino acid
TrVGV298_002252	COG1024	Enoyl-CoA hydratase
TrVGV298_002287	COG1960	acyl-CoA dehydrogenase activity
TrVGV298_002306	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TrVGV298_002324	COG1063	alcohol dehydrogenase
TrVGV298_002379	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TrVGV298_002407	COG1902	pentaerythritol trinitrate reductase activity
TrVGV298_002424	COG2072	flavoprotein involved in K transport
TrVGV298_002429	COG0473	3-isopropylmalate dehydrogenase activity
TrVGV298_002429	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
TrVGV298_002432	COG0508	dehydrogenase complex catalyzes the overall conversion of
TrVGV298_002432	COG0596	Alpha beta hydrolase
TrVGV298_002444	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_002536	COG2146	nitrite reductase [NAD(P)H] activity
TrVGV298_002536	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TrVGV298_002554	COG1335	isochorismatase
TrVGV298_002616	COG1228	amidohydrolase
TrVGV298_002628	COG0596	Alpha beta hydrolase
TrVGV298_002662	COG1643	Atp-dependent helicase
TrVGV298_002726	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_002752	COG1073	alpha beta
TrVGV298_002912	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
TrVGV298_002921	COG0142	geranyltranstransferase activity
TrVGV298_003030	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TrVGV298_003030	COG2169	Transcriptional regulator
TrVGV298_003118	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
TrVGV298_003161	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TrVGV298_003204	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrVGV298_003217	COG0285	dihydrofolate synthase activity
TrVGV298_003253	COG1196	nuclear chromosome segregation
TrVGV298_003260	COG1024	Enoyl-CoA hydratase
TrVGV298_003287	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
TrVGV298_003340	COG2957	Belongs to the agmatine deiminase family
TrVGV298_003368	COG0515	serine threonine protein kinase
TrVGV298_003559	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
TrVGV298_003619	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
TrVGV298_003680	COG0328	RNA-DNA hybrid ribonuclease activity
TrVGV298_003707	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_003764	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TrVGV298_003852	COG1872	DUF167
TrVGV298_003871	COG1388	LysM domain
TrVGV298_003871	COG3942	CHAP domain
TrVGV298_003918	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TrVGV298_003943	COG0667	Aldo Keto reductase
TrVGV298_003966	COG1012	belongs to the aldehyde dehydrogenase family
TrVGV298_003970	COG3507	Belongs to the glycosyl hydrolase 43 family
TrVGV298_004038	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TrVGV298_004175	COG0183	Belongs to the thiolase family
TrVGV298_004190	COG0006	proline dipeptidase activity
TrVGV298_004214	COG1131	(ABC) transporter
TrVGV298_004261	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
TrVGV298_004267	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TrVGV298_004292	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TrVGV298_004332	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
TrVGV298_004346	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
TrVGV298_004350	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrVGV298_004361	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
TrVGV298_004448	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_004504	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_004554	COG0085	RNA polymerase activity
TrVGV298_004583	COG0667	Aldo Keto reductase
TrVGV298_004602	COG1058	Belongs to the CinA family
TrVGV298_004602	COG1546	Belongs to the CinA family
TrVGV298_004608	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_004629	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_004634	COG0657	acetylesterase activity
TrVGV298_004749	COG1252	NADH dehydrogenase
TrVGV298_004790	COG0154	amidase activity
TrVGV298_004799	COG1902	pentaerythritol trinitrate reductase activity
TrVGV298_004820	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_004832	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_004857	COG0574	Belongs to the PEP-utilizing enzyme family
TrVGV298_004857	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TrVGV298_004868	COG1194	a g-specific adenine glycosylase
TrVGV298_004889	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
TrVGV298_004903	COG1132	(ABC) transporter
TrVGV298_004953	COG1228	amidohydrolase
TrVGV298_004954	COG0405	Gamma-glutamyltransferase
TrVGV298_004961	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
TrVGV298_004965	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
TrVGV298_004978	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_004980	COG2070	2-Nitropropane dioxygenase
TrVGV298_004996	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrVGV298_005007	COG1252	NADH dehydrogenase
TrVGV298_005010	COG0833	amino acid
TrVGV298_005026	COG3781	membrane
TrVGV298_005094	COG0513	Belongs to the DEAD box helicase family
TrVGV298_005173	COG3185	4-Hydroxyphenylpyruvate dioxygenase
TrVGV298_005192	COG2153	protein acetylation
TrVGV298_005297	COG1362	aminopeptidase activity
TrVGV298_005343	COG1234	tRNA 3'-trailer cleavage
TrVGV298_005411	COG4336	lyase activity
TrVGV298_005441	COG2890	protein-(glutamine-N5) methyltransferase activity
TrVGV298_005526	COG1051	belongs to the nudix hydrolase family
TrVGV298_005536	COG0673	inositol 2-dehydrogenase activity
TrVGV298_005571	COG0823	Involved in the tonB-independent uptake of proteins
TrVGV298_005598	COG1643	Atp-dependent helicase
TrVGV298_005643	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TrVGV298_005652	COG0484	heat shock protein binding
TrVGV298_005654	COG0354	folic acid binding
TrVGV298_005657	COG1902	pentaerythritol trinitrate reductase activity
TrVGV298_005829	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrVGV298_005829	COG3153	acetyltransferase
TrVGV298_005864	COG2351	hydroxyisourate hydrolase activity
TrVGV298_005939	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
TrVGV298_006013	COG0123	including yeast histone deacetylase and acetoin utilization protein
TrVGV298_006016	COG1643	Atp-dependent helicase
TrVGV298_006040	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TrVGV298_006068	COG2755	lipolytic protein G-D-S-L family
TrVGV298_006114	COG3119	arylsulfatase activity
TrVGV298_006189	COG2813	Specifically methylates the guanine in position
TrVGV298_006189	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TrVGV298_006200	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TrVGV298_006278	COG4221	oxidoreductase activity
TrVGV298_006415	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_006480	COG4221	oxidoreductase activity
TrVGV298_006487	COG0156	8-amino-7-oxononanoate synthase activity
TrVGV298_006533	COG3772	lysozyme
TrVGV298_006535	COG2267	carboxylic ester hydrolase activity
TrVGV298_006561	COG1011	Hydrolase
TrVGV298_006582	COG0625	glutathione transferase activity
TrVGV298_006611	COG0702	epimerase
TrVGV298_006613	COG0656	L-ascorbic acid biosynthetic process
TrVGV298_006725	COG1063	alcohol dehydrogenase
TrVGV298_006736	COG0596	Alpha beta hydrolase
TrVGV298_006774	COG0402	S-adenosylhomocysteine deaminase activity
TrVGV298_006861	COG2130	NADP-dependent
TrVGV298_006888	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TrVGV298_006953	COG0662	Cupin 2, conserved barrel domain protein
TrVGV298_006974	COG0156	8-amino-7-oxononanoate synthase activity
TrVGV298_007108	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
TrVGV298_007119	COG1231	oxidoreductase activity
TrVGV298_007135	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
TrVGV298_007195	COG2814	Major facilitator Superfamily
TrVGV298_007203	COG0596	Alpha beta hydrolase
TrVGV298_007233	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TrVGV298_007239	COG0666	response to abiotic stimulus
TrVGV298_007346	COG2815	serine threonine protein kinase
TrVGV298_007346	COG0515	serine threonine protein kinase
TrVGV298_007418	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
TrVGV298_007419	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TrVGV298_007428	COG0154	amidase activity
TrVGV298_007443	COG0604	alcohol dehydrogenase
TrVGV298_007498	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
TrVGV298_007554	COG0513	Belongs to the DEAD box helicase family
TrVGV298_007565	COG0542	response to heat
TrVGV298_007581	COG2124	cytochrome p450
TrVGV298_007682	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_007698	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_007773	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TrVGV298_007778	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
TrVGV298_007809	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TrVGV298_007820	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
TrVGV298_007883	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TrVGV298_007903	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
TrVGV298_007905	COG3537	Alpha-1,2-mannosidase
TrVGV298_007906	COG1063	alcohol dehydrogenase
TrVGV298_007919	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_007923	COG0596	Alpha beta hydrolase
TrVGV298_007925	COG0473	3-isopropylmalate dehydrogenase activity
TrVGV298_007937	COG4221	oxidoreductase activity
TrVGV298_007949	COG0167	dihydroorotate dehydrogenase activity
TrVGV298_007995	COG0318	PFAM AMP-dependent synthetase and ligase
TrVGV298_008002	COG3961	Belongs to the TPP enzyme family
TrVGV298_008066	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_008104	COG0596	Alpha beta hydrolase
TrVGV298_008114	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
TrVGV298_008131	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
TrVGV298_008143	COG2814	Major facilitator Superfamily
TrVGV298_008143	COG0477	Major facilitator Superfamily
TrVGV298_008154	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TrVGV298_008169	COG1404	Belongs to the peptidase S8 family
TrVGV298_008201	COG0604	alcohol dehydrogenase
TrVGV298_008201	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_008201	COG3321	synthase
TrVGV298_008203	COG3250	beta-galactosidase activity
TrVGV298_008214	COG2828	Protein conserved in bacteria
TrVGV298_008256	COG0302	gtp cyclohydrolase
TrVGV298_008269	COG1902	pentaerythritol trinitrate reductase activity
TrVGV298_008291	COG1397	ADP-ribosylglycohydrolase
TrVGV298_008352	COG1418	mRNA catabolic process
TrVGV298_008371	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_008387	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TrVGV298_008406	COG3250	beta-galactosidase activity
TrVGV298_008426	COG1434	Gram-negative-bacterium-type cell wall biogenesis
TrVGV298_008444	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
TrVGV298_008615	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
TrVGV298_008621	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
TrVGV298_008627	COG0477	Major facilitator Superfamily
TrVGV298_008696	COG0174	glutamine synthetase
TrVGV298_008706	COG0363	glucosamine-6-phosphate deaminase activity
TrVGV298_008719	COG2272	Belongs to the type-B carboxylesterase lipase family
TrVGV298_008730	COG0513	Belongs to the DEAD box helicase family
TrVGV298_008823	COG0515	serine threonine protein kinase
TrVGV298_008853	COG0009	L-threonylcarbamoyladenylate synthase
TrVGV298_008894	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TrVGV298_008994	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TrVGV298_009022	COG0483	inositol monophosphate 1-phosphatase activity
TrVGV298_009094	COG0494	nUDIX hydrolase
TrVGV298_009254	COG0515	serine threonine protein kinase
TrVGV298_009254	COG2815	serine threonine protein kinase
TrVGV298_009256	COG0321	lipoyl(octanoyl) transferase activity
TrVGV298_009307	COG0542	response to heat
TrVGV298_009355	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
TrVGV298_009360	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
TrVGV298_009440	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
TrVGV298_009474	COG0604	alcohol dehydrogenase
TrVGV298_009474	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_009474	COG3321	synthase
TrVGV298_009481	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrVGV298_009481	COG3153	acetyltransferase
TrVGV298_009517	COG1017	nitric oxide dioxygenase activity
TrVGV298_009517	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TrVGV298_009519	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_009546	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TrVGV298_009555	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
TrVGV298_009562	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
TrVGV298_009563	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_009593	COG0672	)-iron permease
TrVGV298_009609	COG1368	sulfuric ester hydrolase activity
TrVGV298_009625	COG2084	Dehydrogenase
TrVGV298_009664	COG0596	Alpha beta hydrolase
TrVGV298_009699	COG0446	pyridine nucleotide-disulphide oxidoreductase
TrVGV298_009719	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
TrVGV298_009745	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TrVGV298_009745	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TrVGV298_009745	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
TrVGV298_009745	COG3321	synthase
TrVGV298_009759	COG0784	Response regulator, receiver
TrVGV298_009759	COG2205	protein histidine kinase activity
TrVGV298_009761	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TrVGV298_009779	COG0076	glutamate decarboxylase activity
TrVGV298_009789	COG0406	alpha-ribazole phosphatase activity
TrVGV298_009794	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TrVGV298_009806	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TrVGV298_009821	COG0154	amidase activity
TrVGV298_009846	COG0300	oxidoreductase activity
TrVGV298_009989	COG2015	COG2015, Alkyl sulfatase and related hydrolases
TrVGV298_010045	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
TrVGV298_010158	COG0513	Belongs to the DEAD box helicase family
TrVGV298_010194	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
TrVGV298_010345	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
TrVGV298_010451	COG0667	Aldo Keto reductase
TrVGV298_010462	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
TrVGV298_010481	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
TrVGV298_010506	COG0175	sulfate reduction
TrVGV298_010510	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TrVGV298_010510	COG1648	precorrin-2 dehydrogenase activity
TrVGV298_010632	COG1131	(ABC) transporter
TrVGV298_010656	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TrVGV298_010656	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TrVGV298_010705	COG0823	Involved in the tonB-independent uptake of proteins
TrVGV298_010763	COG1643	Atp-dependent helicase
TrVGV298_010774	COG1073	alpha beta
TrVGV298_010776	COG1073	alpha beta
TrVGV298_010779	COG3791	Glutathione-dependent formaldehyde-activating
TrVGV298_010785	COG0477	Major facilitator Superfamily
TrVGV298_010838	COG0515	serine threonine protein kinase
TrVGV298_010841	COG0163	prenyltransferase activity
TrVGV298_010861	COG1024	Enoyl-CoA hydratase
TrVGV298_010884	COG2815	serine threonine protein kinase
TrVGV298_010884	COG0515	serine threonine protein kinase
TrVGV298_010895	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TrVGV298_010899	COG4106	trans-aconitate 2-methyltransferase activity
TrVGV298_010925	COG2267	carboxylic ester hydrolase activity
TrVGV298_010958	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_010962	COG0154	amidase activity
TrVGV298_010993	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
TrVGV298_011003	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_011009	COG2226	methyltransferase
TrVGV298_011011	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
TrVGV298_011016	COG2130	NADP-dependent
TrVGV298_011037	COG3321	synthase
TrVGV298_011037	COG0604	alcohol dehydrogenase
TrVGV298_011044	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TrVGV298_011052	COG2814	Major facilitator Superfamily
TrVGV298_011052	COG0477	Major facilitator Superfamily
TrVGV298_011114	COG0702	epimerase
TrVGV298_011229	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
TrVGV298_011284	COG0438	transferase activity, transferring glycosyl groups
TrVGV298_011305	COG0288	reversible hydration of carbon dioxide
TrVGV298_011404	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
TrVGV298_011414	COG3850	Histidine kinase
TrVGV298_011414	COG4999	Histidine kinase
TrVGV298_011414	COG2205	protein histidine kinase activity
TrVGV298_011414	COG3437	response regulator, receiver
TrVGV298_011436	COG1028	Short-chain dehydrogenase reductase Sdr
TrVGV298_011469	COG0517	IMP dehydrogenase activity
TrVGV298_011469	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
TrVGV298_011559	COG2890	protein-(glutamine-N5) methyltransferase activity
TrVGV298_011592	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
TrVGV298_011636	COG2072	flavoprotein involved in K transport
TrVGV298_011659	COG2319	Wd-40 repeat
TrVGV298_011701	COG0829	nickel cation binding
TrVGV298_011704	COG3119	arylsulfatase activity
TrVGV298_011714	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
TrVGV298_011739	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
TrVGV298_011743	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
TrVGV298_011771	COG0515	serine threonine protein kinase
TrVGV298_011771	COG2815	serine threonine protein kinase
TrVGV298_011776	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TrVGV298_011866	COG1132	(ABC) transporter
TrVGV298_011870	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
TrVGV298_011870	COG2124	cytochrome p450
TrVGV298_011974	COG0431	NADPH-dependent FMN reductase
TrVGV298_012006	COG1228	amidohydrolase
TrVGV298_012008	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
TrVGV298_012100	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TrVGV298_012127	COG0193	aminoacyl-tRNA hydrolase activity
TrVGV298_012145	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
TrVGV298_012166	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TrVGV298_012204	COG1902	pentaerythritol trinitrate reductase activity
TrVGV298_012216	COG1335	isochorismatase
TrVGV298_012217	COG0596	Alpha beta hydrolase
TrVGV298_012242	COG1028	Short-chain dehydrogenase reductase Sdr