locus-tag	class	description
Tery_0001	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Tery_0008	COG0592	DNA-directed DNA polymerase activity
Tery_0013	COG0003	Pfam Anion-transporting ATPase
Tery_0019	COG0129	dihydroxy-acid dehydratase activity
Tery_0021	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Tery_0027	COG1754	DNA topoisomerase type I activity
Tery_0027	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Tery_0043	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Tery_0045	COG1543	Belongs to the glycosyl hydrolase 57 family
Tery_0059	COG0515	serine threonine protein kinase
Tery_0059	COG3266	domain, Protein
Tery_0060	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Tery_0069	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Tery_0071	COG0538	isocitrate dehydrogenase activity
Tery_0080	COG0602	queuosine metabolic process
Tery_0081	COG1803	Methylglyoxal synthase
Tery_0081	COG1597	lipid kinase activity
Tery_0103	COG1741	Belongs to the pirin family
Tery_0104	COG4243	Vitamin k epoxide reductase
Tery_0127	COG0411	ABC transporter
Tery_0129	COG0559	Belongs to the binding-protein-dependent transport system permease family
Tery_0138	COG1295	ribonuclease BN
Tery_0140	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Tery_0142	COG3239	Fatty acid desaturase
Tery_0143	COG1192	Involved in chromosome partitioning
Tery_0146	COG0438	transferase activity, transferring glycosyl groups
Tery_0148	COG1215	transferase activity, transferring glycosyl groups
Tery_0157	COG0142	geranyltranstransferase activity
Tery_0161	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Tery_0162	COG0678	peroxiredoxin activity
Tery_0163	COG0424	maF-like protein
Tery_0168	COG0632	four-way junction helicase activity
Tery_0169	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Tery_0171	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Tery_0173	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
Tery_0178	COG0515	serine threonine protein kinase
Tery_0181	COG2124	cytochrome p450
Tery_0184	COG0515	serine threonine protein kinase
Tery_0184	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_0188	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Tery_0201	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Tery_0205	COG4221	oxidoreductase activity
Tery_0207	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Tery_0209	COG1196	nuclear chromosome segregation
Tery_0209	COG3264	Mechanosensitive ion channel
Tery_0218	COG0058	SHG alpha-glucan phosphorylase activity
Tery_0224	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Tery_0228	COG2319	Wd-40 repeat
Tery_0228	COG1672	PFAM Archaeal ATPase
Tery_0232	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Tery_0235	COG0450	alkyl hydroperoxide reductase
Tery_0237	COG0739	heme binding
Tery_0238	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Tery_0242	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
Tery_0249	COG0116	Belongs to the methyltransferase superfamily
Tery_0258	COG1446	asparaginase
Tery_0262	COG0222	ribosome binding
Tery_0263	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Tery_0264	COG0081	regulation of translation
Tery_0265	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Tery_0266	COG0250	Participates in transcription elongation, termination and antitermination
Tery_0267	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Tery_0268	COG0335	large ribosomal subunit rRNA binding
Tery_0269	COG0697	spore germination
Tery_0270	COG0459	protein refolding
Tery_0273	COG2814	Major facilitator Superfamily
Tery_0276	COG1845	cytochrome c oxidase, subunit III
Tery_0278	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Tery_0281	COG0429	hydrolase of the alpha beta-hydrolase fold
Tery_0283	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Tery_0284	COG2022	thiamine diphosphate biosynthetic process
Tery_0284	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Tery_0286	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Tery_0293	COG0436	Aminotransferase
Tery_0295	COG0308	aminopeptidase N
Tery_0298	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Tery_0299	COG0488	(ABC) transporter
Tery_0301	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Tery_0302	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Tery_0302	COG0426	domain, Protein
Tery_0303	COG2373	Large extracellular alpha-helical protein
Tery_0308	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Tery_0319	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Tery_0324	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Tery_0325	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
Tery_0327	COG2226	methyltransferase
Tery_0331	COG4178	(ABC) transporter
Tery_0332	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Tery_0333	COG1160	GTP binding
Tery_0334	COG2855	membrane
Tery_0335	COG5398	heme oxygenase
Tery_0340	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
Tery_0349	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_0351	COG0596	Alpha beta hydrolase
Tery_0352	COG0156	8-amino-7-oxononanoate synthase activity
Tery_0359	COG2132	Multicopper oxidase
Tery_0364	COG2226	methyltransferase
Tery_0365	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
Tery_0369	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
Tery_0371	COG0697	spore germination
Tery_0376	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Tery_0376	COG0284	orotidine-5'-phosphate decarboxylase activity
Tery_0377	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tery_0394	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Tery_0399	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Tery_0399	COG0438	transferase activity, transferring glycosyl groups
Tery_0402	COG0024	Methionine aminopeptidase
Tery_0406	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Tery_0407	COG1525	nuclease
Tery_0413	COG1573	uracil-dna glycosylase
Tery_0416	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Tery_0425	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Tery_0425	COG1372	Participates in initiation and elongation during chromosome replication
Tery_0428	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Tery_0434	COG0601	transmembrane transport
Tery_0435	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Tery_0441	COG0523	cobalamin synthesis protein
Tery_0442	COG1490	D-aminoacyl-tRNA deacylase activity
Tery_0444	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Tery_0445	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Tery_0446	COG0284	orotidine-5'-phosphate decarboxylase activity
Tery_0449	COG0464	growth
Tery_0450	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Tery_0451	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Tery_0452	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Tery_0453	COG2048	Heterodisulfide reductase, subunit B
Tery_0454	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_0455	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Tery_0457	COG4279	zinc finger
Tery_0460	COG3266	domain, Protein
Tery_0460	COG0515	serine threonine protein kinase
Tery_0461	COG3266	domain, Protein
Tery_0461	COG0515	serine threonine protein kinase
Tery_0462	COG3266	domain, Protein
Tery_0462	COG0515	serine threonine protein kinase
Tery_0463	COG3266	domain, Protein
Tery_0463	COG0515	serine threonine protein kinase
Tery_0466	COG0069	glutamate synthase activity
Tery_0466	COG0070	glutamate synthase
Tery_0466	COG0067	glutamate synthase
Tery_0471	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
Tery_0471	COG0662	Cupin 2, conserved barrel domain protein
Tery_0472	COG0316	Belongs to the HesB IscA family
Tery_0473	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Tery_0474	COG0049	tRNA binding
Tery_0475	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Tery_0476	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Tery_0477	COG0051	transcription antitermination factor activity, RNA binding
Tery_0480	COG0077	Prephenate dehydratase
Tery_0480	COG1605	Chorismate mutase
Tery_0482	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Tery_0483	COG1530	ribonuclease E activity
Tery_0485	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tery_0487	COG0436	Aminotransferase
Tery_0490	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
Tery_0491	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Tery_0495	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Tery_0496	COG1672	PFAM Archaeal ATPase
Tery_0497	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Tery_0499	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Tery_0500	COG0668	transmembrane transport
Tery_0503	COG2912	Transglutaminase-like superfamily
Tery_0504	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Tery_0509	COG0730	response to heat
Tery_0510	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Tery_0511	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Tery_0516	COG0492	ferredoxin-NADP+ reductase activity
Tery_0517	COG1797	cobyrinic acid a,c-diamide synthase activity
Tery_0519	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Tery_0534	COG1716	ATPase activity
Tery_0535	COG0363	glucosamine-6-phosphate deaminase activity
Tery_0543	COG0542	response to heat
Tery_0546	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Tery_0546	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Tery_0559	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Tery_0559	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Tery_0560	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Tery_0562	COG0604	alcohol dehydrogenase
Tery_0562	COG3321	synthase
Tery_0562	COG1028	Short-chain dehydrogenase reductase Sdr
Tery_0563	COG4636	protein conserved in cyanobacteria
Tery_0581	COG0133	tryptophan synthase activity
Tery_0584	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Tery_0585	COG0740	serine-type endopeptidase activity
Tery_0586	COG0544	peptidyl-prolyl cis-trans isomerase activity
Tery_0587	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Tery_0588	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Tery_0589	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
Tery_0592	COG4242	Belongs to the peptidase S51 family
Tery_0596	COG1610	YqeY-like protein
Tery_0597	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Tery_0602	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Tery_0604	COG2267	carboxylic ester hydrolase activity
Tery_0608	COG0784	Response regulator, receiver
Tery_0609	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Tery_0610	COG0859	PFAM glycosyl transferase family 9
Tery_0613	COG2197	response regulator
Tery_0615	COG2205	protein histidine kinase activity
Tery_0615	COG0784	Response regulator, receiver
Tery_0618	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Tery_0618	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
Tery_0619	COG0631	protein serine/threonine phosphatase activity
Tery_0621	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_0621	COG0515	serine threonine protein kinase
Tery_0627	COG1333	cytochrome c biogenesis protein
Tery_0633	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Tery_0639	COG2319	Wd-40 repeat
Tery_0639	COG3903	Transcriptional regulator
Tery_0641	COG1234	tRNA 3'-trailer cleavage
Tery_0642	COG2385	sporulation resulting in formation of a cellular spore
Tery_0644	COG0497	DNA recombination
Tery_0651	COG0009	L-threonylcarbamoyladenylate synthase
Tery_0652	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
Tery_0659	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_0660	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Tery_0664	COG1049	propionate catabolic process, 2-methylcitrate cycle
Tery_0667	COG0170	dolichyl monophosphate biosynthetic process
Tery_0675	COG0745	RESPONSE REGULATOR receiver
Tery_0677	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Tery_0678	COG0271	Belongs to the BolA IbaG family
Tery_0680	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Tery_0682	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Tery_0683	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Tery_0684	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
Tery_0685	COG3409	Peptidoglycan-binding domain 1 protein
Tery_0685	COG3429	Glucose-6-phosphate dehydrogenase subunit
Tery_0686	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Tery_0687	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Tery_0688	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Tery_0692	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
Tery_0696	COG1028	Short-chain dehydrogenase reductase Sdr
Tery_0697	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Tery_0699	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Tery_0703	COG0489	protein tyrosine kinase activity
Tery_0706	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Tery_0708	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Tery_0714	COG2198	Histidine kinase
Tery_0714	COG0643	Histidine kinase
Tery_0715	COG2203	Gaf domain
Tery_0715	COG0840	transmembrane signaling receptor activity
Tery_0718	COG0784	Response regulator, receiver
Tery_0721	COG3958	Transketolase
Tery_0722	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Tery_0723	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Tery_0723	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Tery_0725	COG0482	sulfurtransferase activity
Tery_0727	COG1657	PFAM Prenyltransferase squalene oxidase
Tery_0728	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
Tery_0730	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Tery_0731	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Tery_0733	COG0792	nuclease activity
Tery_0735	COG0358	DNA primase activity
Tery_0737	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Tery_0738	COG0552	protein localization to endoplasmic reticulum
Tery_0739	COG2208	phosphoserine phosphatase activity
Tery_0742	COG1035	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
Tery_0744	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Tery_0744	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Tery_0746	COG0831	urea catabolic process
Tery_0747	COG0832	Belongs to the urease beta subunit family
Tery_0748	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Tery_0749	COG0829	nickel cation binding
Tery_0751	COG0830	nickel cation binding
Tery_0752	COG0804	urea catabolic process
Tery_0754	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Tery_0756	COG0483	inositol monophosphate 1-phosphatase activity
Tery_0758	COG0124	histidyl-tRNA synthetase
Tery_0762	COG0501	Belongs to the peptidase M48B family
Tery_0767	COG0303	'Molybdopterin
Tery_0770	COG0426	domain, Protein
Tery_0770	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Tery_0784	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Tery_0798	COG0375	protein maturation
Tery_0799	COG4211	Belongs to the binding-protein-dependent transport system permease family
Tery_0800	COG1129	ABC transporter
Tery_0802	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Tery_0804	COG0463	Glycosyl transferase, family 2
Tery_0808	COG0242	peptide deformylase activity
Tery_0812	COG1511	domain protein
Tery_0812	COG3264	Mechanosensitive ion channel
Tery_0827	COG1803	Methylglyoxal synthase
Tery_0827	COG1597	lipid kinase activity
Tery_0828	COG1132	(ABC) transporter
Tery_0832	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Tery_0836	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
Tery_0838	COG3659	wide pore channel activity
Tery_0845	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
Tery_0847	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Tery_0858	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_0858	COG0515	serine threonine protein kinase
Tery_0863	COG1331	Highly conserved protein containing a thioredoxin domain
Tery_0865	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Tery_0866	COG1429	ligase activity, forming nitrogen-metal bonds
Tery_0871	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Tery_0875	COG0003	Pfam Anion-transporting ATPase
Tery_0876	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Tery_0878	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
Tery_0879	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Tery_0882	COG0137	argininosuccinate synthase activity
Tery_0883	COG1216	Glycosyl transferase, family 2
Tery_0886	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Tery_0887	COG0401	homolog of Blt101
Tery_0888	COG2314	TM2 domain
Tery_0889	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Tery_0892	COG0681	Belongs to the peptidase S26 family
Tery_0893	COG0443	Heat shock 70 kDa protein
Tery_0905	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
Tery_0907	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Tery_0907	COG0519	Catalyzes the synthesis of GMP from XMP
Tery_0909	COG0405	Gamma-glutamyltransferase
Tery_0910	COG0574	Belongs to the PEP-utilizing enzyme family
Tery_0910	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Tery_0911	COG1040	competence protein
Tery_0918	COG2385	sporulation resulting in formation of a cellular spore
Tery_0920	COG1366	Belongs to the anti-sigma-factor antagonist family
Tery_0921	COG0745	RESPONSE REGULATOR receiver
Tery_0937	COG3903	Transcriptional regulator
Tery_0937	COG2319	Wd-40 repeat
Tery_0938	COG1615	UPF0182 protein
Tery_0943	COG3850	Histidine kinase
Tery_0943	COG3437	response regulator, receiver
Tery_0943	COG4999	Histidine kinase
Tery_0943	COG2205	protein histidine kinase activity
Tery_0945	COG3118	belongs to the thioredoxin family
Tery_0948	COG1494	fructose-1,6-bisphosphatase
Tery_0949	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Tery_0956	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Tery_0957	COG1088	dTDP-glucose 4,6-dehydratase activity
Tery_0958	COG2843	Capsule synthesis protein
Tery_0966	COG0612	Peptidase, M16
Tery_0968	COG0825	malonyl-CoA metabolic process
Tery_0969	COG0302	gtp cyclohydrolase
Tery_0970	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Tery_0972	COG5002	protein histidine kinase activity
Tery_0974	COG1070	Carbohydrate kinase
Tery_1003	COG0702	epimerase
Tery_1005	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Tery_1011	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Tery_1015	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Tery_1018	COG0083	homoserine kinase activity
Tery_1020	COG2252	PERMEase
Tery_1022	COG0371	Dehydrogenase
Tery_1023	COG0436	Aminotransferase
Tery_1030	COG0515	serine threonine protein kinase
Tery_1030	COG2815	serine threonine protein kinase
Tery_1036	COG2815	serine threonine protein kinase
Tery_1036	COG0515	serine threonine protein kinase
Tery_1037	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Tery_1041	COG0066	3-isopropylmalate dehydratase activity
Tery_1043	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Tery_1047	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_1057	COG0659	secondary active sulfate transmembrane transporter activity
Tery_1058	COG0659	secondary active sulfate transmembrane transporter activity
Tery_1062	COG1214	PFAM Peptidase M22, glycoprotease
Tery_1064	COG0617	tRNA 3'-terminal CCA addition
Tery_1067	COG2226	methyltransferase
Tery_1069	COG2223	nitrite transmembrane transporter activity
Tery_1070	COG0243	molybdopterin cofactor binding
Tery_1071	COG2337	Toxic component of a toxin-antitoxin (TA) module
Tery_1073	COG1410	methionine synthase
Tery_1073	COG0646	methionine synthase
Tery_1074	COG3706	GGDEF domain
Tery_1074	COG0745	RESPONSE REGULATOR receiver
Tery_1075	COG0384	phenazine biosynthesis protein PhzF
Tery_1084	COG0033	Phosphoglucomutase
Tery_1095	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Tery_1098	COG1442	glycosyl transferase family 8
Tery_1099	COG0438	transferase activity, transferring glycosyl groups
Tery_1105	COG0571	ribonuclease III activity
Tery_1106	COG0312	modulator of DNA gyrase
Tery_1113	COG0415	Belongs to the DNA photolyase family
Tery_1114	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
Tery_1121	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Tery_1124	COG0494	nUDIX hydrolase
Tery_1126	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Tery_1127	COG3751	2OG-Fe(II) oxygenase superfamily
Tery_1128	COG0138	bifunctional purine biosynthesis protein purh
Tery_1135	COG0438	transferase activity, transferring glycosyl groups
Tery_1136	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Tery_1137	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Tery_1138	COG0793	Belongs to the peptidase S41A family
Tery_1141	COG0105	UTP biosynthetic process
Tery_1142	COG1166	arginine decarboxylase activity
Tery_1143	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Tery_1149	COG0629	single-stranded DNA binding
Tery_1150	COG1077	Cell shape determining protein MreB Mrl
Tery_1153	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Tery_1158	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Tery_1160	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Tery_1161	COG0052	Belongs to the universal ribosomal protein uS2 family
Tery_1165	COG0489	protein tyrosine kinase activity
Tery_1166	COG0408	coproporphyrinogen oxidase activity
Tery_1170	COG0739	heme binding
Tery_1173	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Tery_1175	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Tery_1194	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Tery_1195	COG4956	integral membrane protein (PIN domain superfamily)
Tery_1201	COG0463	Glycosyl transferase, family 2
Tery_1206	COG2045	Belongs to the ComB family
Tery_1209	COG3275	phosphorelay sensor kinase activity
Tery_1214	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Tery_1228	COG1122	ATPase activity
Tery_1232	COG2154	pterin-4-alpha-carbinolamine dehydratase
Tery_1233	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Tery_1234	COG3659	wide pore channel activity
Tery_1235	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Tery_1240	COG0484	heat shock protein binding
Tery_1244	COG2304	oxidoreductase activity
Tery_1246	COG0740	serine-type endopeptidase activity
Tery_1250	COG0484	heat shock protein binding
Tery_1252	COG0530	calcium, potassium:sodium antiporter activity
Tery_1259	COG0012	GTP binding
Tery_1276	COG1982	Orn Lys Arg decarboxylase major
Tery_1291	COG0575	Belongs to the CDS family
Tery_1293	COG1187	pseudouridine synthase activity
Tery_1294	COG1426	Protein conserved in bacteria
Tery_1296	COG1640	4-alpha-glucanotransferase
Tery_1301	COG3781	membrane
Tery_1306	COG0443	Heat shock 70 kDa protein
Tery_1307	COG2217	Heavy metal translocating P-type atpase
Tery_1310	COG0681	Belongs to the peptidase S26 family
Tery_1312	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Tery_1313	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Tery_1314	COG0511	ligase activity, forming carbon-carbon bonds
Tery_1318	COG0442	prolyl-tRNA aminoacylation
Tery_1323	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Tery_1325	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Tery_1328	COG0114	fumarate hydratase activity
Tery_1340	COG0463	Glycosyl transferase, family 2
Tery_1344	COG1091	dTDP-4-dehydrorhamnose reductase activity
Tery_1348	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Tery_1350	COG0154	amidase activity
Tery_1352	COG2274	protein secretion by the type I secretion system
Tery_1360	COG1216	Glycosyl transferase, family 2
Tery_1360	COG0438	transferase activity, transferring glycosyl groups
Tery_1365	COG2255	four-way junction helicase activity
Tery_1366	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Tery_1366	COG0723	plastoquinol--plastocyanin reductase activity
Tery_1369	COG1982	Orn Lys Arg decarboxylase major
Tery_1372	COG1215	transferase activity, transferring glycosyl groups
Tery_1380	COG0149	triose-phosphate isomerase activity
Tery_1381	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Tery_1384	COG0601	transmembrane transport
Tery_1417	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
Tery_1418	COG2205	protein histidine kinase activity
Tery_1418	COG2202	Pas domain
Tery_1421	COG0617	tRNA 3'-terminal CCA addition
Tery_1422	COG4636	protein conserved in cyanobacteria
Tery_1430	COG2255	four-way junction helicase activity
Tery_1435	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Tery_1438	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
Tery_1440	COG2319	Wd-40 repeat
Tery_1440	COG3903	Transcriptional regulator
Tery_1441	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Tery_1457	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Tery_1458	COG2113	Glycine betaine
Tery_1459	COG2113	Glycine betaine
Tery_1460	COG0359	binds to the 23S rRNA
Tery_1462	COG1372	Participates in initiation and elongation during chromosome replication
Tery_1462	COG1372	Participates in initiation and elongation during chromosome replication
Tery_1462	COG0305	Participates in initiation and elongation during chromosome replication
Tery_1462	COG0305	Participates in initiation and elongation during chromosome replication
Tery_1470	COG5002	protein histidine kinase activity
Tery_1471	COG0151	Belongs to the GarS family
Tery_1473	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Tery_1476	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Tery_1480	COG2226	methyltransferase
Tery_1490	COG2226	methyltransferase
Tery_1492	COG0438	transferase activity, transferring glycosyl groups
Tery_1492	COG1216	Glycosyl transferase, family 2
Tery_1504	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Tery_1508	COG0163	prenyltransferase activity
Tery_1509	COG0163	prenyltransferase activity
Tery_1511	COG0557	exoribonuclease II activity
Tery_1519	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Tery_1522	COG0297	glycogen (starch) synthase activity
Tery_1523	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Tery_1530	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Tery_1532	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
Tery_1534	COG1305	Transglutaminase-like
Tery_1539	COG0438	transferase activity, transferring glycosyl groups
Tery_1540	COG0730	response to heat
Tery_1541	COG1185	polyribonucleotide nucleotidyltransferase activity
Tery_1543	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Tery_1543	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Tery_1544	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
Tery_1551	COG1196	nuclear chromosome segregation
Tery_1553	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
Tery_1555	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Tery_1562	COG2217	Heavy metal translocating P-type atpase
Tery_1564	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Tery_1565	COG0470	DNA polymerase III
Tery_1567	COG4802	Ferredoxin thioredoxin reductase catalytic beta chain
Tery_1571	COG0514	ATP-dependent DNA helicase (RecQ)
Tery_1572	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
Tery_1574	COG4451	ribulose bisphosphate carboxylase, small
Tery_1574	COG0464	growth
Tery_1576	COG0713	ATP synthesis coupled electron transport
Tery_1577	COG0839	Belongs to the complex I subunit 6 family
Tery_1578	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_1579	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Tery_1580	COG0372	Belongs to the citrate synthase family
Tery_1581	COG2062	phosphohistidine phosphatase, SixA
Tery_1583	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Tery_1584	COG0328	RNA-DNA hybrid ribonuclease activity
Tery_1589	COG1304	FMN binding
Tery_1590	COG0616	signal peptide processing
Tery_1597	COG1192	Involved in chromosome partitioning
Tery_1602	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Tery_1603	COG0285	dihydrofolate synthase activity
Tery_1610	COG0776	regulation of translation
Tery_1611	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Tery_1613	COG1408	metallophosphoesterase
Tery_1614	COG1006	Multisubunit Na H antiporter MnhC subunit
Tery_1624	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_1627	COG0515	serine threonine protein kinase
Tery_1627	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_1631	COG0475	glutathione-regulated potassium exporter activity
Tery_1632	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Tery_1635	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Tery_1638	COG1247	-acetyltransferase
Tery_1640	COG0454	-acetyltransferase
Tery_1642	COG2890	protein-(glutamine-N5) methyltransferase activity
Tery_1643	COG0009	L-threonylcarbamoyladenylate synthase
Tery_1644	COG2205	protein histidine kinase activity
Tery_1645	COG0456	acetyltransferase
Tery_1657	COG0443	Heat shock 70 kDa protein
Tery_1661	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Tery_1661	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Tery_1663	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Tery_1665	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
Tery_1666	COG0716	FMN binding
Tery_1668	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_1668	COG0515	serine threonine protein kinase
Tery_1669	COG4191	Histidine kinase
Tery_1671	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Tery_1687	COG3588	fructose-bisphosphate aldolase
Tery_1692	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Tery_1699	COG0492	ferredoxin-NADP+ reductase activity
Tery_1703	COG2192	nodulation
Tery_1704	COG0495	leucyl-tRNA aminoacylation
Tery_1710	COG0534	Mate efflux family protein
Tery_1714	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Tery_1715	COG0702	epimerase
Tery_1722	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_1722	COG0515	serine threonine protein kinase
Tery_1723	COG0515	serine threonine protein kinase
Tery_1723	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_1724	COG1032	radical SAM domain protein
Tery_1725	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
Tery_1727	COG0515	serine threonine protein kinase
Tery_1727	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Tery_1731	COG0515	serine threonine protein kinase
Tery_1731	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Tery_1737	COG0438	transferase activity, transferring glycosyl groups
Tery_1743	COG3000	fatty acid hydroxylase
Tery_1743	COG0300	oxidoreductase activity
Tery_1748	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Tery_1749	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Tery_1750	COG0443	Heat shock 70 kDa protein
Tery_1751	COG0484	heat shock protein binding
Tery_1759	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
Tery_1761	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
Tery_1768	COG0484	heat shock protein binding
Tery_1769	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Tery_1774	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Tery_1781	COG0109	protoheme IX farnesyltransferase activity
Tery_1788	COG0004	ammonium transporteR
Tery_1792	COG0483	inositol monophosphate 1-phosphatase activity
Tery_1795	COG4221	oxidoreductase activity
Tery_1797	COG2267	carboxylic ester hydrolase activity
Tery_1798	COG0739	heme binding
Tery_1799	COG0723	plastoquinol--plastocyanin reductase activity
Tery_1806	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Tery_1811	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Tery_1812	COG0805	protein transport
Tery_1813	COG1672	PFAM Archaeal ATPase
Tery_1813	COG2319	Wd-40 repeat
Tery_1816	COG0416	fatty acid biosynthetic process
Tery_1817	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Tery_1823	COG0644	oxidoreductase
Tery_1827	COG0123	including yeast histone deacetylase and acetoin utilization protein
Tery_1829	COG1022	Amp-dependent synthetase and ligase
Tery_1831	COG0508	dehydrogenase complex catalyzes the overall conversion of
Tery_1834	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
Tery_1837	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
Tery_1840	COG0768	penicillin binding
Tery_1842	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
Tery_1843	COG1473	amidohydrolase
Tery_1845	COG0572	uridine kinase
Tery_1846	COG4106	trans-aconitate 2-methyltransferase activity
Tery_1849	COG0564	pseudouridine synthase activity
Tery_1850	COG0440	acetolactate synthase activity
Tery_1854	COG4636	protein conserved in cyanobacteria
Tery_1857	COG1316	TRANSCRIPTIONal
Tery_1860	COG1959	2 iron, 2 sulfur cluster binding
Tery_1861	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
Tery_1862	COG0714	Associated with various cellular activities
Tery_1863	COG0724	RNA recognition motif
Tery_1864	COG0196	riboflavin kinase activity
Tery_1870	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Tery_1872	COG1104	cysteine desulfurase activity
Tery_1876	COG0754	glutathionylspermidine amidase activity
Tery_1877	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Tery_1879	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Tery_1881	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Tery_1882	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Tery_1885	COG4231	catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
Tery_1889	COG0587	DNA-directed DNA polymerase activity
Tery_1889	COG0587	DNA-directed DNA polymerase activity
Tery_1901	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
Tery_1904	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Tery_1905	COG0587	DNA-directed DNA polymerase activity
Tery_1907	COG0501	Belongs to the peptidase M48B family
Tery_1913	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Tery_1914	COG0673	inositol 2-dehydrogenase activity
Tery_1917	COG4245	von Willebrand factor, type A
Tery_1925	COG0489	protein tyrosine kinase activity
Tery_1926	COG1012	belongs to the aldehyde dehydrogenase family
Tery_1937	COG0142	geranyltranstransferase activity
Tery_1940	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Tery_1952	COG0330	HflC and HflK could
Tery_1954	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Tery_1955	COG0047	phosphoribosylformylglycinamidine synthase activity
Tery_1956	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Tery_1957	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Tery_1958	COG0735	belongs to the Fur family
Tery_1959	COG0860	N-Acetylmuramoyl-L-alanine amidase
Tery_1959	COG3409	Peptidoglycan-binding domain 1 protein
Tery_1962	COG0336	Belongs to the RNA methyltransferase TrmD family
Tery_1966	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Tery_1973	COG0156	8-amino-7-oxononanoate synthase activity
Tery_1984	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Tery_1984	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Tery_1986	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
Tery_1991	COG2226	methyltransferase
Tery_1993	COG0398	Pfam SNARE associated Golgi protein
Tery_1995	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Tery_1998	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Tery_1999	COG4597	amino acid ABC transporter
Tery_2000	COG0765	amino acid transport
Tery_2001	COG1126	abc transporter atp-binding protein
Tery_2004	COG2094	Belongs to the DNA glycosylase MPG family
Tery_2007	COG0167	dihydroorotate dehydrogenase activity
Tery_2011	COG3118	belongs to the thioredoxin family
Tery_2018	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Tery_2022	COG4372	Transposase
Tery_2024	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Tery_2028	COG0131	Imidazoleglycerol-phosphate dehydratase
Tery_2033	COG0515	serine threonine protein kinase
Tery_2033	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_2037	COG1404	Belongs to the peptidase S8 family
Tery_2039	COG0189	ligase activity
Tery_2040	COG4067	protein conserved in archaea
Tery_2040	COG0189	ligase activity
Tery_2041	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Tery_2046	COG1525	nuclease
Tery_2047	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Tery_2050	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_2051	COG3266	domain, Protein
Tery_2051	COG0515	serine threonine protein kinase
Tery_2053	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Tery_2054	COG0277	FAD linked oxidase domain protein
Tery_2056	COG0247	lactate metabolic process
Tery_2060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_2062	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
Tery_2064	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_2064	COG0515	serine threonine protein kinase
Tery_2065	COG0154	amidase activity
Tery_2067	COG0438	transferase activity, transferring glycosyl groups
Tery_2072	COG0730	response to heat
Tery_2078	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Tery_2083	COG0756	dUTP diphosphatase activity
Tery_2084	COG2131	deaminase
Tery_2089	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
Tery_2090	COG0768	penicillin binding
Tery_2092	COG0741	lytic transglycosylase activity
Tery_2096	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
Tery_2098	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Tery_2102	COG1253	flavin adenine dinucleotide binding
Tery_2105	COG2211	Major facilitator Superfamily
Tery_2107	COG2815	serine threonine protein kinase
Tery_2107	COG0515	serine threonine protein kinase
Tery_2108	COG3852	Histidine kinase
Tery_2109	COG0318	PFAM AMP-dependent synthetase and ligase
Tery_2112	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Tery_2114	COG3903	Transcriptional regulator
Tery_2114	COG2319	Wd-40 repeat
Tery_2116	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
Tery_2121	COG0670	Belongs to the BI1 family
Tery_2123	COG1376	ErfK ybiS ycfS ynhG family protein
Tery_2124	COG1376	ErfK ybiS ycfS ynhG family protein
Tery_2125	COG0217	transcriptional regulatory protein
Tery_2136	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Tery_2140	COG2010	Cytochrome c
Tery_2142	COG0742	ribosomal rna small subunit methyltransferase
Tery_2143	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Tery_2144	COG0571	ribonuclease III activity
Tery_2147	COG0297	glycogen (starch) synthase activity
Tery_2156	COG4106	trans-aconitate 2-methyltransferase activity
Tery_2157	COG0802	atpase or kinase
Tery_2158	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Tery_2163	COG0391	Required for morphogenesis under gluconeogenic growth conditions
Tery_2164	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Tery_2173	COG2226	methyltransferase
Tery_2177	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Tery_2179	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Tery_2181	COG0406	alpha-ribazole phosphatase activity
Tery_2191	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Tery_2196	COG1404	Belongs to the peptidase S8 family
Tery_2198	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Tery_2199	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Tery_2200	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Tery_2201	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Tery_2203	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Tery_2204	COG0356	it plays a direct role in the translocation of protons across the membrane
Tery_2206	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Tery_2209	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Tery_2209	COG0237	dephospho-CoA kinase activity
Tery_2210	COG0237	dephospho-CoA kinase activity
Tery_2210	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Tery_2214	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_2215	COG0673	inositol 2-dehydrogenase activity
Tery_2216	COG0784	Response regulator, receiver
Tery_2216	COG2205	protein histidine kinase activity
Tery_2221	COG2022	thiamine diphosphate biosynthetic process
Tery_2224	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
Tery_2228	COG0515	serine threonine protein kinase
Tery_2228	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Tery_2229	COG2255	four-way junction helicase activity
Tery_2240	COG0516	GMP reductase activity
Tery_2240	COG0517	IMP dehydrogenase activity
Tery_2246	COG0017	Asparaginyl-tRNA synthetase
Tery_2250	COG4783	chaperone-mediated protein folding
Tery_2252	COG2226	methyltransferase
Tery_2253	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Tery_2254	COG0121	glutamine amidotransferase
Tery_2262	COG1088	dTDP-glucose 4,6-dehydratase activity
Tery_2263	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Tery_2267	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
Tery_2274	COG0668	transmembrane transport
Tery_2275	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Tery_2279	COG5322	oxidoreductase activity
Tery_2280	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
Tery_2283	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Tery_2292	COG2319	Wd-40 repeat
Tery_2292	COG3903	Transcriptional regulator
Tery_2301	COG2119	membrane
Tery_2302	COG2119	membrane
Tery_2305	COG0745	RESPONSE REGULATOR receiver
Tery_2306	COG1132	(ABC) transporter
Tery_2308	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Tery_2310	COG0505	Belongs to the CarA family
Tery_2313	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Tery_2314	COG0596	Alpha beta hydrolase
Tery_2316	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Tery_2319	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Tery_2337	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_2342	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Tery_2347	COG0643	Histidine kinase
Tery_2347	COG2198	Histidine kinase
Tery_2348	COG0515	serine threonine protein kinase
Tery_2348	COG3266	domain, Protein
Tery_2349	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_2352	COG2239	Acts as a magnesium transporter
Tery_2354	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Tery_2362	COG1404	Belongs to the peptidase S8 family
Tery_2366	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Tery_2367	COG0631	protein serine/threonine phosphatase activity
Tery_2368	COG4245	von Willebrand factor, type A
Tery_2371	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Tery_2380	COG3596	GTP binding
Tery_2384	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Tery_2388	COG4968	Prepilin-type N-terminal cleavage methylation domain
Tery_2390	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Tery_2392	COG0628	permease
Tery_2396	COG1832	CoA-binding protein
Tery_2400	COG4783	chaperone-mediated protein folding
Tery_2401	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Tery_2403	COG1187	pseudouridine synthase activity
Tery_2406	COG0793	Belongs to the peptidase S41A family
Tery_2407	COG0521	Mo-molybdopterin cofactor biosynthetic process
Tery_2411	COG1131	(ABC) transporter
Tery_2416	COG0251	oxidation-reduction process
Tery_2424	COG0693	protein deglycase activity
Tery_2425	COG0481	GTPase activity
Tery_2427	COG0484	heat shock protein binding
Tery_2432	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Tery_2433	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
Tery_2435	COG0019	diaminopimelate decarboxylase activity
Tery_2437	COG0542	response to heat
Tery_2440	COG0625	glutathione transferase activity
Tery_2445	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Tery_2446	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Tery_2448	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
Tery_2449	COG1063	alcohol dehydrogenase
Tery_2450	COG1365	unkown
Tery_2451	COG2175	clavaminate synthase activity
Tery_2454	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Tery_2455	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
Tery_2456	COG0343	queuine tRNA-ribosyltransferase activity
Tery_2458	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
Tery_2462	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Tery_2464	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Tery_2471	COG2319	Wd-40 repeat
Tery_2471	COG4249	Peptidase C14 caspase catalytic subunit p20
Tery_2474	COG1053	succinate dehydrogenase
Tery_2477	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Tery_2486	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Tery_2488	COG1304	FMN binding
Tery_2490	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Tery_2492	COG1410	methionine synthase
Tery_2492	COG0646	methionine synthase
Tery_2494	COG0616	signal peptide processing
Tery_2495	COG0697	spore germination
Tery_2501	COG2971	BadF BadG BcrA BcrD
Tery_2502	COG0539	negative regulation of cytoplasmic translation
Tery_2503	COG0412	Dienelactone hydrolase
Tery_2504	COG1725	Transcriptional regulator
Tery_2510	COG0390	transport system, permease component
Tery_2512	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Tery_2514	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Tery_2528	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Tery_2529	COG1007	ATP synthesis coupled electron transport
Tery_2533	COG1074	ATP-dependent DNA helicase activity
Tery_2534	COG2205	protein histidine kinase activity
Tery_2535	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Tery_2536	COG0228	four-way junction DNA binding
Tery_2537	COG1837	Belongs to the UPF0109 family
Tery_2538	COG1702	phosphate starvation-inducible protein PhoH
Tery_2545	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
Tery_2546	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
Tery_2556	COG2815	serine threonine protein kinase
Tery_2556	COG0515	serine threonine protein kinase
Tery_2559	COG0716	FMN binding
Tery_2563	COG3794	PFAM blue (type 1) copper domain protein
Tery_2565	COG0501	Belongs to the peptidase M48B family
Tery_2567	COG0656	L-ascorbic acid biosynthetic process
Tery_2583	COG0352	thiamine-phosphate diphosphorylase activity
Tery_2586	COG0542	response to heat
Tery_2587	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Tery_2594	COG0515	serine threonine protein kinase
Tery_2594	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_2595	COG4636	protein conserved in cyanobacteria
Tery_2596	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Tery_2597	COG0204	Acyl-transferase
Tery_2599	COG1012	belongs to the aldehyde dehydrogenase family
Tery_2601	COG3128	pkhd-type hydroxylase
Tery_2603	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Tery_2604	COG1316	TRANSCRIPTIONal
Tery_2606	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Tery_2607	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Tery_2607	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Tery_2609	COG3266	domain, Protein
Tery_2609	COG0515	serine threonine protein kinase
Tery_2622	COG3932	Exopolysaccharide synthesis, ExoD
Tery_2623	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Tery_2625	COG2046	Belongs to the sulfate adenylyltransferase family
Tery_2627	COG0363	glucosamine-6-phosphate deaminase activity
Tery_2630	COG1028	Short-chain dehydrogenase reductase Sdr
Tery_2639	COG0435	Glutathione S-transferase
Tery_2642	COG3536	Protein conserved in bacteria
Tery_2643	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Tery_2649	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Tery_2652	COG1012	belongs to the aldehyde dehydrogenase family
Tery_2653	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Tery_2657	COG0778	Nitroreductase
Tery_2660	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Tery_2661	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Tery_2662	COG1546	Belongs to the CinA family
Tery_2662	COG1058	Belongs to the CinA family
Tery_2664	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Tery_2666	COG1480	7TM receptor with intracellular HD hydrolase
Tery_2667	COG2003	Belongs to the UPF0758 family
Tery_2668	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
Tery_2669	COG0667	Aldo Keto reductase
Tery_2674	COG2059	Chromate
Tery_2678	COG0556	nucleotide-excision repair
Tery_2683	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
Tery_2684	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Tery_2686	COG2010	Cytochrome c
Tery_2687	COG2010	Cytochrome c
Tery_2688	COG3206	protein involved in exopolysaccharide biosynthesis
Tery_2688	COG0489	protein tyrosine kinase activity
Tery_2695	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Tery_2696	COG0596	Alpha beta hydrolase
Tery_2702	COG0628	permease
Tery_2703	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Tery_2704	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Tery_2705	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Tery_2707	COG1216	Glycosyl transferase, family 2
Tery_2707	COG0438	transferase activity, transferring glycosyl groups
Tery_2714	COG0315	cyclic pyranopterin monophosphate synthase activity
Tery_2717	COG0436	Aminotransferase
Tery_2723	COG0728	peptidoglycan biosynthetic process
Tery_2725	COG1489	DNA binding
Tery_2728	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Tery_2729	COG0784	Response regulator, receiver
Tery_2729	COG2205	protein histidine kinase activity
Tery_2732	COG3265	gluconokinase activity
Tery_2735	COG2197	response regulator
Tery_2740	COG0140	phosphoribosyl-ATP diphosphatase activity
Tery_2740	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Tery_2741	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Tery_2743	COG1666	GTP binding
Tery_2747	COG0857	belongs to the CobB CobQ family
Tery_2749	COG1215	transferase activity, transferring glycosyl groups
Tery_2750	COG0045	succinate-CoA ligase (ADP-forming) activity
Tery_2751	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Tery_2767	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_2769	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Tery_2771	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Tery_2772	COG2124	cytochrome p450
Tery_2773	COG0612	Peptidase, M16
Tery_2779	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Tery_2780	COG1122	ATPase activity
Tery_2782	COG0310	cobalt ion transport
Tery_2788	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Tery_2793	COG0148	phosphopyruvate hydratase activity
Tery_2798	COG0726	polysaccharide deacetylase
Tery_2799	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Tery_2799	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Tery_2800	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Tery_2802	COG1177	transmembrane transport
Tery_2803	COG1176	ABC-type spermidine putrescine transport system, permease component I
Tery_2804	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
Tery_2805	COG3842	ATPase activity
Tery_2810	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Tery_2815	COG3842	ATPase activity
Tery_2816	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
Tery_2817	COG1177	transmembrane transport
Tery_2818	COG1176	ABC-type spermidine putrescine transport system, permease component I
Tery_2822	COG1649	PFAM Uncharacterised BCR, COG1649
Tery_2828	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
Tery_2829	COG0515	serine threonine protein kinase
Tery_2829	COG3266	domain, Protein
Tery_2831	COG0515	serine threonine protein kinase
Tery_2834	COG0194	GDP metabolic process
Tery_2835	COG2052	Domain of unknown function (DUF370)
Tery_2837	COG0175	sulfate reduction
Tery_2838	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
Tery_2839	COG0571	ribonuclease III activity
Tery_2840	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Tery_2841	COG0445	tRNA wobble uridine modification
Tery_2842	COG0347	Belongs to the P(II) protein family
Tery_2845	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Tery_2856	COG1216	Glycosyl transferase, family 2
Tery_2865	COG1234	tRNA 3'-trailer cleavage
Tery_2866	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Tery_2869	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Tery_2870	COG0193	aminoacyl-tRNA hydrolase activity
Tery_2872	COG0504	CTP synthase activity
Tery_2875	COG1940	carbohydrate kinase activity
Tery_2877	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Tery_2878	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
Tery_2885	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
Tery_2893	COG1472	Belongs to the glycosyl hydrolase 3 family
Tery_2895	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Tery_2898	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_2902	COG0745	RESPONSE REGULATOR receiver
Tery_2904	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Tery_2909	COG2715	membrane protein required for spore maturation
Tery_2911	COG0432	Pfam Uncharacterised protein family UPF0047
Tery_2912	COG1106	Psort location Cytoplasmic, score
Tery_2914	COG1028	Short-chain dehydrogenase reductase Sdr
Tery_2915	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Tery_2922	COG1266	CAAX protease self-immunity
Tery_2924	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Tery_2926	COG0469	pyruvate kinase activity
Tery_2928	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Tery_2933	COG0758	DNA mediated transformation
Tery_2933	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Tery_2937	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Tery_2938	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Tery_2939	COG0085	RNA polymerase activity
Tery_2940	COG0084	hydrolase, TatD family'
Tery_2950	COG1215	transferase activity, transferring glycosyl groups
Tery_2957	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Tery_2959	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Tery_2970	COG1181	Belongs to the D-alanine--D-alanine ligase family
Tery_2971	COG1181	Belongs to the D-alanine--D-alanine ligase family
Tery_2974	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Tery_2982	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Tery_2983	COG0254	rRNA binding
Tery_2985	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Tery_2986	COG0101	tRNA pseudouridine synthase activity
Tery_2987	COG0203	ribosomal protein L17
Tery_2988	COG0202	RNA polymerase activity
Tery_2989	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Tery_2990	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Tery_2991	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Tery_2993	COG0563	adenylate kinase activity
Tery_2994	COG0201	protein transport
Tery_2995	COG0200	Binds to the 23S rRNA
Tery_2997	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Tery_2998	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Tery_2999	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Tery_3000	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Tery_3001	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Tery_3002	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Tery_3003	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Tery_3004	COG0255	Belongs to the universal ribosomal protein uL29 family
Tery_3005	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Tery_3006	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Tery_3007	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Tery_3008	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Tery_3009	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Tery_3010	COG0089	rRNA binding
Tery_3011	COG0088	Forms part of the polypeptide exit tunnel
Tery_3012	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Tery_3015	COG3854	ATPases associated with a variety of cellular activities
Tery_3017	COG1045	serine acetyltransferase
Tery_3023	COG0596	Alpha beta hydrolase
Tery_3036	COG0515	serine threonine protein kinase
Tery_3038	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Tery_3038	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
Tery_3040	COG0463	Glycosyl transferase, family 2
Tery_3042	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Tery_3046	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_3050	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Tery_3053	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Tery_3061	COG0071	Belongs to the small heat shock protein (HSP20) family
Tery_3063	COG0071	Belongs to the small heat shock protein (HSP20) family
Tery_3064	COG0071	Belongs to the small heat shock protein (HSP20) family
Tery_3082	COG0582	viral genome integration into host DNA
Tery_3084	COG0582	viral genome integration into host DNA
Tery_3086	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Tery_3089	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Tery_3105	COG0517	IMP dehydrogenase activity
Tery_3105	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Tery_3118	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Tery_3119	COG2124	cytochrome p450
Tery_3126	COG0667	Aldo Keto reductase
Tery_3130	COG1834	amidinotransferase
Tery_3133	COG1902	pentaerythritol trinitrate reductase activity
Tery_3145	COG0631	protein serine/threonine phosphatase activity
Tery_3150	COG0515	serine threonine protein kinase
Tery_3150	COG2815	serine threonine protein kinase
Tery_3151	COG0542	response to heat
Tery_3157	COG1505	serine-type exopeptidase activity
Tery_3161	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Tery_3162	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Tery_3163	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Tery_3164	COG0745	RESPONSE REGULATOR receiver
Tery_3169	COG0134	indole-3-glycerol-phosphate synthase activity
Tery_3171	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Tery_3173	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Tery_3174	COG0686	Belongs to the AlaDH PNT family
Tery_3177	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Tery_3180	COG0438	transferase activity, transferring glycosyl groups
Tery_3181	COG0318	PFAM AMP-dependent synthetase and ligase
Tery_3182	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Tery_3183	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
Tery_3184	COG0321	lipoyl(octanoyl) transferase activity
Tery_3185	COG0629	single-stranded DNA binding
Tery_3188	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Tery_3191	COG1994	Peptidase M50
Tery_3191	COG0517	IMP dehydrogenase activity
Tery_3210	COG5002	protein histidine kinase activity
Tery_3211	COG2211	Major facilitator Superfamily
Tery_3212	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Tery_3213	COG1672	PFAM Archaeal ATPase
Tery_3213	COG2319	Wd-40 repeat
Tery_3215	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Tery_3219	COG1121	(ABC) transporter
Tery_3222	COG3842	ATPase activity
Tery_3223	COG1178	ABC-type Fe3 transport system permease component
Tery_3224	COG1429	ligase activity, forming nitrogen-metal bonds
Tery_3225	COG0463	Glycosyl transferase, family 2
Tery_3229	COG3240	lipase activity
Tery_3238	COG1215	transferase activity, transferring glycosyl groups
Tery_3241	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_3242	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Tery_3243	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Tery_3244	COG2198	Histidine kinase
Tery_3244	COG0643	Histidine kinase
Tery_3246	COG0840	transmembrane signaling receptor activity
Tery_3248	COG0745	RESPONSE REGULATOR receiver
Tery_3249	COG0784	Response regulator, receiver
Tery_3251	COG0037	tRNA processing
Tery_3252	COG0431	NADPH-dependent FMN reductase
Tery_3253	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_3264	COG0514	ATP-dependent DNA helicase (RecQ)
Tery_3268	COG0750	zinc metalloprotease
Tery_3269	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Tery_3270	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Tery_3274	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Tery_3275	COG0798	PFAM Bile acid sodium symporter
Tery_3280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Tery_3282	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Tery_3284	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Tery_3293	COG0436	Aminotransferase
Tery_3296	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Tery_3297	COG0631	protein serine/threonine phosphatase activity
Tery_3298	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Tery_3301	COG1193	negative regulation of DNA recombination
Tery_3302	COG0772	Belongs to the SEDS family
Tery_3306	COG0516	GMP reductase activity
Tery_3311	COG3118	belongs to the thioredoxin family
Tery_3312	COG3118	belongs to the thioredoxin family
Tery_3313	COG0300	oxidoreductase activity
Tery_3315	COG3781	membrane
Tery_3318	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Tery_3319	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Tery_3325	COG1587	Uroporphyrinogen-III synthase
Tery_3336	COG0631	protein serine/threonine phosphatase activity
Tery_3337	COG0515	serine threonine protein kinase
Tery_3337	COG2815	serine threonine protein kinase
Tery_3342	COG0322	excinuclease ABC activity
Tery_3343	COG0023	Translation Initiation Factor
Tery_3345	COG0515	serine threonine protein kinase
Tery_3345	COG3266	domain, Protein
Tery_3351	COG0739	heme binding
Tery_3352	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Tery_3352	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Tery_3355	COG0747	negative chemotaxis
Tery_3358	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Tery_3360	COG0316	Belongs to the HesB IscA family
Tery_3360	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
Tery_3371	COG0463	Glycosyl transferase, family 2
Tery_3371	COG0457	Tetratricopeptide repeat
Tery_3372	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Tery_3373	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Tery_3374	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
Tery_3375	COG0589	response to stress
Tery_3376	COG0126	phosphoglycerate kinase activity
Tery_3377	COG1840	ABC-type Fe3 transport system, periplasmic component
Tery_3380	COG0542	response to heat
Tery_3382	COG0850	regulation of cytokinetic process
Tery_3383	COG2894	cell division
Tery_3384	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Tery_3385	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Tery_3386	COG0355	proton-transporting ATP synthase activity, rotational mechanism
Tery_3391	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Tery_3394	COG0488	(ABC) transporter
Tery_3395	COG2204	response regulator
Tery_3400	COG0515	serine threonine protein kinase
Tery_3402	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
Tery_3404	COG0735	belongs to the Fur family
Tery_3406	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Tery_3407	COG1131	(ABC) transporter
Tery_3411	COG0006	proline dipeptidase activity
Tery_3422	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
Tery_3423	COG2815	serine threonine protein kinase
Tery_3423	COG0515	serine threonine protein kinase
Tery_3424	COG3937	granule-associated protein
Tery_3425	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Tery_3435	COG0110	maltose O-acetyltransferase activity
Tery_3437	COG3118	belongs to the thioredoxin family
Tery_3438	COG1028	Short-chain dehydrogenase reductase Sdr
Tery_3440	COG0205	6-phosphofructokinase activity
Tery_3441	COG0525	valine-tRNA ligase activity
Tery_3446	COG1012	belongs to the aldehyde dehydrogenase family
Tery_3453	COG0300	oxidoreductase activity
Tery_3454	COG1253	flavin adenine dinucleotide binding
Tery_3459	COG3209	COG3209 Rhs family protein
Tery_3461	COG4581	dead DEAH box helicase
Tery_3466	COG3751	2OG-Fe(II) oxygenase superfamily
Tery_3481	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Tery_3482	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Tery_3484	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_3490	COG0542	response to heat
Tery_3493	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Tery_3494	COG0745	RESPONSE REGULATOR receiver
Tery_3499	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_3500	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_3501	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tery_3510	COG2815	serine threonine protein kinase
Tery_3510	COG0515	serine threonine protein kinase
Tery_3512	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tery_3514	COG3586	endonuclease activity
Tery_3517	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_3523	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Tery_3525	COG0436	Aminotransferase
Tery_3530	COG0514	ATP-dependent DNA helicase (RecQ)
Tery_3531	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Tery_3533	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Tery_3534	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Tery_3539	COG0581	inorganic phosphate transmembrane transporter activity
Tery_3540	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Tery_3544	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Tery_3545	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Tery_3558	COG1836	PFAM Integral membrane protein DUF92
Tery_3559	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Tery_3567	COG1073	alpha beta
Tery_3575	COG4191	Histidine kinase
Tery_3583	COG1401	restriction endodeoxyribonuclease activity
Tery_3593	COG0574	Belongs to the PEP-utilizing enzyme family
Tery_3593	COG3848	Pyruvate phosphate dikinase
Tery_3603	COG1803	Methylglyoxal synthase
Tery_3609	COG1215	transferase activity, transferring glycosyl groups
Tery_3616	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Tery_3620	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Tery_3622	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
Tery_3623	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Tery_3629	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Tery_3645	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Tery_3654	COG0572	uridine kinase
Tery_3661	COG1252	NADH dehydrogenase
Tery_3679	COG2259	Doxx family
Tery_3681	COG0515	serine threonine protein kinase
Tery_3681	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_3683	COG1205	dead DEAH box helicase
Tery_3683	COG1111	helicase
Tery_3684	COG0113	porphobilinogen synthase activity
Tery_3686	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
Tery_3688	COG3977	Valine--pyruvate aminotransferase
Tery_3690	COG1473	amidohydrolase
Tery_3691	COG4603	Belongs to the binding-protein-dependent transport system permease family
Tery_3693	COG2124	cytochrome p450
Tery_3694	COG0058	SHG alpha-glucan phosphorylase activity
Tery_3699	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
Tery_3707	COG0439	Biotin carboxylase
Tery_3709	COG0515	serine threonine protein kinase
Tery_3710	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_3719	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Tery_3725	COG1472	Belongs to the glycosyl hydrolase 3 family
Tery_3728	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Tery_3729	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Tery_3730	COG0557	exoribonuclease II activity
Tery_3731	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Tery_3732	COG0513	Belongs to the DEAD box helicase family
Tery_3733	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tery_3745	COG2082	Precorrin-8x methylmutase
Tery_3746	COG1122	ATPase activity
Tery_3755	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_3757	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Tery_3765	COG0351	phosphomethylpyrimidine kinase
Tery_3766	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Tery_3771	COG4249	Peptidase C14 caspase catalytic subunit p20
Tery_3771	COG2319	Wd-40 repeat
Tery_3772	COG0357	Ribosomal RNA small subunit methyltransferase G
Tery_3777	COG0644	oxidoreductase
Tery_3778	COG0233	cytoplasmic translational termination
Tery_3779	COG0528	UMP kinase activity
Tery_3780	COG0010	Belongs to the arginase family
Tery_3782	COG1132	(ABC) transporter
Tery_3784	COG0463	Glycosyl transferase, family 2
Tery_3786	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Tery_3790	COG5002	protein histidine kinase activity
Tery_3792	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Tery_3794	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Tery_3795	COG0393	Putative heavy-metal-binding
Tery_3799	COG1124	(ABC) transporter
Tery_3801	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Tery_3802	COG2205	protein histidine kinase activity
Tery_3804	COG4251	negative regulation of phosphorylation
Tery_3807	COG0701	Predicted permease
Tery_3810	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Tery_3811	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Tery_3812	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Tery_3818	COG0438	transferase activity, transferring glycosyl groups
Tery_3819	COG0604	alcohol dehydrogenase
Tery_3819	COG3321	synthase
Tery_3822	COG0604	alcohol dehydrogenase
Tery_3822	COG0604	alcohol dehydrogenase
Tery_3822	COG3321	synthase
Tery_3822	COG3321	synthase
Tery_3826	COG0492	ferredoxin-NADP+ reductase activity
Tery_3828	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Tery_3831	COG0095	Lipoate-protein ligase
Tery_3833	COG2226	methyltransferase
Tery_3834	COG0174	glutamine synthetase
Tery_3836	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
Tery_3843	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Tery_3849	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Tery_3849	COG4451	ribulose bisphosphate carboxylase, small
Tery_3850	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
Tery_3851	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
Tery_3852	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
Tery_3853	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Tery_3858	COG2211	Major facilitator Superfamily
Tery_3860	COG2267	carboxylic ester hydrolase activity
Tery_3863	COG1672	PFAM Archaeal ATPase
Tery_3863	COG2319	Wd-40 repeat
Tery_3866	COG0752	glycyl-tRNA synthetase alpha subunit
Tery_3869	COG2319	Wd-40 repeat
Tery_3869	COG4249	Peptidase C14 caspase catalytic subunit p20
Tery_3875	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
Tery_3877	COG0419	ATPase involved in DNA repair
Tery_3881	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Tery_3882	COG0569	domain protein
Tery_3883	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Tery_3884	COG2226	methyltransferase
Tery_3887	COG0360	Binds together with S18 to 16S ribosomal RNA
Tery_3909	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Tery_3912	COG5002	protein histidine kinase activity
Tery_3916	COG1191	sigma factor activity
Tery_3920	COG0135	phosphoribosylanthranilate isomerase activity
Tery_3922	COG0517	IMP dehydrogenase activity
Tery_3922	COG1994	Peptidase M50
Tery_3923	COG2319	Wd-40 repeat
Tery_3925	COG3046	protein related to deoxyribodipyrimidine photolyase
Tery_3929	COG2081	HI0933 family
Tery_3930	COG1773	rubredoxin
Tery_3931	COG0726	polysaccharide deacetylase
Tery_3932	COG2319	Wd-40 repeat
Tery_3934	COG2319	Wd-40 repeat
Tery_3948	COG1090	epimerase
Tery_3951	COG0316	Belongs to the HesB IscA family
Tery_3954	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Tery_3957	COG1492	cobalamin metabolic process
Tery_3959	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Tery_3961	COG1372	Participates in initiation and elongation during chromosome replication
Tery_3961	COG0187	DNA topoisomerase II activity
Tery_3962	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Tery_3967	COG0471	metal ion transport
Tery_3968	COG0529	Catalyzes the synthesis of activated sulfate
Tery_3973	COG4399	Belongs to the UPF0754 family
Tery_3976	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Tery_3978	COG0195	Participates in both transcription termination and antitermination
Tery_3979	COG0779	Required for maturation of 30S ribosomal subunits
Tery_3985	COG0018	arginyl-trna synthetase
Tery_3990	COG0745	RESPONSE REGULATOR receiver
Tery_3991	COG2066	Belongs to the glutaminase family
Tery_3992	COG1028	Short-chain dehydrogenase reductase Sdr
Tery_3993	COG0004	ammonium transporteR
Tery_3995	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
Tery_4000	COG0784	Response regulator, receiver
Tery_4001	COG0628	permease
Tery_4002	COG0215	cysteine-tRNA ligase activity
Tery_4011	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Tery_4011	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Tery_4012	COG0443	Heat shock 70 kDa protein
Tery_4013	COG0484	heat shock protein binding
Tery_4026	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Tery_4027	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Tery_4029	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Tery_4030	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Tery_4031	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Tery_4044	COG1104	cysteine desulfurase activity
Tery_4050	COG2205	protein histidine kinase activity
Tery_4054	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_4055	COG3903	Transcriptional regulator
Tery_4055	COG2319	Wd-40 repeat
Tery_4058	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Tery_4060	COG0515	serine threonine protein kinase
Tery_4060	COG3266	domain, Protein
Tery_4064	COG0824	Thioesterase
Tery_4067	COG0318	PFAM AMP-dependent synthetase and ligase
Tery_4068	COG4948	Mandelate Racemase Muconate Lactonizing
Tery_4069	COG0596	Alpha beta hydrolase
Tery_4070	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Tery_4071	COG1575	Belongs to the MenA family. Type 1 subfamily
Tery_4077	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
Tery_4078	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Tery_4080	COG1842	Phage shock protein A
Tery_4081	COG1842	Phage shock protein A
Tery_4082	COG1842	Phage shock protein A
Tery_4089	COG0590	tRNA wobble adenosine to inosine editing
Tery_4091	COG0277	FAD linked oxidase domain protein
Tery_4093	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Tery_4095	COG0463	Glycosyl transferase, family 2
Tery_4096	COG1252	NADH dehydrogenase
Tery_4099	COG0191	fructose-bisphosphate aldolase activity
Tery_4101	COG2843	Capsule synthesis protein
Tery_4103	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Tery_4109	COG0517	IMP dehydrogenase activity
Tery_4109	COG4175	Glycine betaine
Tery_4110	COG4176	ABC-type proline glycine betaine transport system permease component
Tery_4115	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Tery_4122	COG1216	Glycosyl transferase, family 2
Tery_4124	COG0438	transferase activity, transferring glycosyl groups
Tery_4126	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Tery_4132	COG1045	serine acetyltransferase
Tery_4135	COG2906	2 iron, 2 sulfur cluster binding
Tery_4135	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
Tery_4135	COG0822	iron-sulfur transferase activity
Tery_4136	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
Tery_4139	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Tery_4147	COG0725	ABC transporter, periplasmic molybdate-binding protein
Tery_4148	COG3842	ATPase activity
Tery_4154	COG0784	Response regulator, receiver
Tery_4154	COG2198	Histidine kinase
Tery_4154	COG5002	protein histidine kinase activity
Tery_4169	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Tery_4170	COG0494	nUDIX hydrolase
Tery_4172	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Tery_4174	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
Tery_4177	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Tery_4180	COG3772	lysozyme
Tery_4181	COG0330	HflC and HflK could
Tery_4182	COG3185	4-Hydroxyphenylpyruvate dioxygenase
Tery_4185	COG0123	including yeast histone deacetylase and acetoin utilization protein
Tery_4186	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
Tery_4187	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Tery_4189	COG3852	Histidine kinase
Tery_4190	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Tery_4190	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
Tery_4195	COG2264	protein methyltransferase activity
Tery_4196	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Tery_4205	COG0673	inositol 2-dehydrogenase activity
Tery_4206	COG0189	ligase activity
Tery_4207	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Tery_4209	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Tery_4209	COG0574	Belongs to the PEP-utilizing enzyme family
Tery_4217	COG1181	Belongs to the D-alanine--D-alanine ligase family
Tery_4220	COG1733	regulation of RNA biosynthetic process
Tery_4221	COG4251	negative regulation of phosphorylation
Tery_4222	COG0784	Response regulator, receiver
Tery_4223	COG0745	RESPONSE REGULATOR receiver
Tery_4224	COG2198	Histidine kinase
Tery_4224	COG0643	Histidine kinase
Tery_4227	COG2201	protein-glutamate methylesterase activity
Tery_4230	COG1192	Involved in chromosome partitioning
Tery_4231	COG5001	Diguanylate cyclase
Tery_4231	COG4251	negative regulation of phosphorylation
Tery_4231	COG2203	Gaf domain
Tery_4231	COG3706	GGDEF domain
Tery_4233	COG1074	ATP-dependent DNA helicase activity
Tery_4237	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Tery_4241	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Tery_4243	COG0443	Heat shock 70 kDa protein
Tery_4265	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Tery_4276	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Tery_4279	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Tery_4282	COG0783	Belongs to the Dps family
Tery_4284	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
Tery_4298	COG3437	response regulator, receiver
Tery_4298	COG0784	Response regulator, receiver
Tery_4304	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Tery_4305	COG0235	Class ii aldolase
Tery_4311	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Tery_4313	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Tery_4314	COG2226	methyltransferase
Tery_4316	COG3429	Glucose-6-phosphate dehydrogenase subunit
Tery_4316	COG3409	Peptidoglycan-binding domain 1 protein
Tery_4323	COG0745	RESPONSE REGULATOR receiver
Tery_4326	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Tery_4327	COG0459	protein refolding
Tery_4328	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
Tery_4329	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
Tery_4332	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Tery_4333	COG0583	DNA-binding transcription factor activity
Tery_4335	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Tery_4342	COG0612	Peptidase, M16
Tery_4348	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Tery_4349	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
Tery_4351	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_4351	COG0515	serine threonine protein kinase
Tery_4352	COG0157	Belongs to the NadC ModD family
Tery_4355	COG0719	Fe-S assembly protein
Tery_4356	COG0396	ATPase activity
Tery_4357	COG0719	Fe-S assembly protein
Tery_4358	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Tery_4368	COG0540	Belongs to the ATCase OTCase family
Tery_4369	COG0314	molybdopterin synthase activity
Tery_4370	COG1595	DNA-templated transcription, initiation
Tery_4376	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Tery_4384	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
Tery_4385	COG1615	UPF0182 protein
Tery_4387	COG2264	protein methyltransferase activity
Tery_4391	COG1509	lysine 2,3-aminomutase activity
Tery_4395	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Tery_4397	COG0484	heat shock protein binding
Tery_4399	COG1131	(ABC) transporter
Tery_4402	COG1132	(ABC) transporter
Tery_4403	COG0473	3-isopropylmalate dehydrogenase activity
Tery_4408	COG4451	ribulose bisphosphate carboxylase, small
Tery_4410	COG1850	ribulose-bisphosphate carboxylase activity
Tery_4411	COG0515	serine threonine protein kinase
Tery_4411	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_4416	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_4421	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
Tery_4422	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
Tery_4423	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Tery_4426	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Tery_4430	COG2027	D-alanyl-D-alanine carboxypeptidase
Tery_4431	COG1131	(ABC) transporter
Tery_4431	COG1716	ATPase activity
Tery_4431	COG0842	Transport permease protein
Tery_4441	COG2226	methyltransferase
Tery_4443	COG2166	iron-sulfur cluster assembly
Tery_4447	COG2205	protein histidine kinase activity
Tery_4447	COG5002	protein histidine kinase activity
Tery_4447	COG0784	Response regulator, receiver
Tery_4448	COG0811	peptide transport
Tery_4449	COG0848	biopolymer transport protein
Tery_4456	COG0668	transmembrane transport
Tery_4457	COG0432	Pfam Uncharacterised protein family UPF0047
Tery_4458	COG2133	pyrroloquinoline quinone binding
Tery_4461	COG0778	Nitroreductase
Tery_4462	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Tery_4462	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Tery_4465	COG3659	wide pore channel activity
Tery_4466	COG3659	wide pore channel activity
Tery_4467	COG3266	domain, Protein
Tery_4467	COG0515	serine threonine protein kinase
Tery_4468	COG2363	Small membrane protein
Tery_4469	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Tery_4470	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Tery_4471	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Tery_4474	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
Tery_4476	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
Tery_4477	COG0004	ammonium transporteR
Tery_4479	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Tery_4480	COG1136	(ABC) transporter
Tery_4481	COG0751	glycine-tRNA ligase activity
Tery_4482	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Tery_4486	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Tery_4490	COG0024	Methionine aminopeptidase
Tery_4491	COG0745	RESPONSE REGULATOR receiver
Tery_4492	COG3239	Fatty acid desaturase
Tery_4493	COG0159	tryptophan synthase activity
Tery_4502	COG0824	Thioesterase
Tery_4509	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Tery_4511	COG0435	Glutathione S-transferase
Tery_4518	COG0793	Belongs to the peptidase S41A family
Tery_4522	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
Tery_4525	COG0270	DNA (cytosine-5-)-methyltransferase activity
Tery_4529	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Tery_4537	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Tery_4537	COG1605	Chorismate mutase
Tery_4538	COG0415	Belongs to the DNA photolyase family
Tery_4539	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Tery_4543	COG1028	Short-chain dehydrogenase reductase Sdr
Tery_4544	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Tery_4565	COG3335	DDE superfamily endonuclease
Tery_4567	COG0460	homoserine dehydrogenase
Tery_4570	COG0402	S-adenosylhomocysteine deaminase activity
Tery_4572	COG0739	heme binding
Tery_4574	COG0562	UDP-galactopyranose mutase
Tery_4580	COG0457	Tetratricopeptide repeat
Tery_4583	COG0604	alcohol dehydrogenase
Tery_4589	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Tery_4594	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_4599	COG0006	proline dipeptidase activity
Tery_4602	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Tery_4604	COG1381	Involved in DNA repair and RecF pathway recombination
Tery_4608	COG0113	porphobilinogen synthase activity
Tery_4615	COG0438	transferase activity, transferring glycosyl groups
Tery_4616	COG0302	gtp cyclohydrolase
Tery_4617	COG0523	cobalamin synthesis protein
Tery_4618	COG2010	Cytochrome c
Tery_4621	COG0181	hydroxymethylbilane synthase activity
Tery_4625	COG2319	Wd-40 repeat
Tery_4625	COG4249	Peptidase C14 caspase catalytic subunit p20
Tery_4627	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Tery_4630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Tery_4632	COG1619	proteins homologs of microcin C7 resistance protein MccF
Tery_4633	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Tery_4635	COG0653	protein targeting
Tery_4639	COG0799	negative regulation of ribosome biogenesis
Tery_4648	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Tery_4649	COG0339	signal peptide processing
Tery_4651	COG0827	DNA restriction-modification system
Tery_4655	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Tery_4659	COG1834	amidinotransferase
Tery_4661	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Tery_4663	COG0539	negative regulation of cytoplasmic translation
Tery_4664	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Tery_4668	COG2885	chlorophyll binding
Tery_4669	COG2885	chlorophyll binding
Tery_4671	COG4251	negative regulation of phosphorylation
Tery_4684	COG2091	lysine biosynthetic process via aminoadipic acid
Tery_4685	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
Tery_4689	COG1606	tRNA processing
Tery_4690	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Tery_4692	COG0646	methionine synthase
Tery_4692	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Tery_4693	COG0180	Tryptophanyl-tRNA synthetase
Tery_4696	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Tery_4697	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Tery_4698	COG3608	succinylglutamate desuccinylase aspartoacylase
Tery_4700	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Tery_4701	COG0724	RNA recognition motif
Tery_4702	COG0724	RNA recognition motif
Tery_4703	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Tery_4704	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Tery_4705	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Tery_4707	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Tery_4708	COG0594	ribonuclease P activity
Tery_4710	COG0706	membrane insertase activity
Tery_4713	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tery_4719	COG0747	negative chemotaxis
Tery_4722	COG1691	(AIR) carboxylase
Tery_4731	COG3344	reverse transcriptase
Tery_4741	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
Tery_4747	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Tery_4749	COG5002	protein histidine kinase activity
Tery_4754	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Tery_4756	COG0483	inositol monophosphate 1-phosphatase activity
Tery_4764	COG0537	adenosine 5'-monophosphoramidase activity
Tery_4765	COG0606	chelatase, subunit chli
Tery_4771	COG1216	Glycosyl transferase, family 2
Tery_4774	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Tery_4781	COG0515	serine threonine protein kinase
Tery_4781	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_4782	COG0515	serine threonine protein kinase
Tery_4782	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_4786	COG1115	amino acid carrier protein
Tery_4787	COG1115	amino acid carrier protein
Tery_4790	COG1132	(ABC) transporter
Tery_4793	COG0628	permease
Tery_4795	COG0434	BtpA family
Tery_4796	COG1555	photosystem II stabilization
Tery_4798	COG1968	undecaprenyl-diphosphatase activity
Tery_4802	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Tery_4806	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Tery_4809	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Tery_4815	COG0649	NAD binding
Tery_4816	COG0275	rRNA processing
Tery_4817	COG2204	response regulator
Tery_4821	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Tery_4825	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Tery_4901	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
Tery_4903	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Tery_4907	COG1799	cell septum assembly
Tery_4908	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
Tery_4909	COG0500	methyltransferase
Tery_4912	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_4912	COG0515	serine threonine protein kinase
Tery_4913	COG0515	serine threonine protein kinase
Tery_4913	COG1357	PFAM Pentapeptide repeats (8 copies)
Tery_4937	COG0745	RESPONSE REGULATOR receiver
Tery_4941	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Tery_4942	COG0772	Belongs to the SEDS family
Tery_4944	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Tery_4949	COG0800	Aldolase
Tery_4951	COG0803	Belongs to the bacterial solute-binding protein 9 family
Tery_4952	COG1121	(ABC) transporter
Tery_4953	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Tery_4955	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Tery_4967	COG1240	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
Tery_4967	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
Tery_4979	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_4983	COG2319	Wd-40 repeat
Tery_4983	COG1672	PFAM Archaeal ATPase
Tery_4989	COG3903	Transcriptional regulator
Tery_4989	COG3629	intracellular signal transduction
Tery_4990	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Tery_4994	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
Tery_4995	COG3639	organic phosphonate transmembrane transporter activity
Tery_4996	COG3639	organic phosphonate transmembrane transporter activity
Tery_5000	COG3627	carbon phosphorus lyase activity
Tery_5001	COG4107	phosphonate C-P lyase system protein PhnK
Tery_5002	COG4778	phosphonate C-P lyase system protein PhnL
Tery_5003	COG3454	Phosphonate metabolism
Tery_5008	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Tery_5012	COG1619	proteins homologs of microcin C7 resistance protein MccF
Tery_5014	COG2770	Histidine kinase
Tery_5014	COG2208	phosphoserine phosphatase activity
Tery_5017	COG1366	Belongs to the anti-sigma-factor antagonist family
Tery_5027	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Tery_5028	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
Tery_5029	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Tery_5029	COG0512	Glutamine amidotransferase of anthranilate synthase
Tery_5031	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Tery_5031	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Tery_5032	COG0509	glycine decarboxylation via glycine cleavage system
Tery_5034	COG3956	TIGRFAM MazG family protein
Tery_5038	COG0450	alkyl hydroperoxide reductase
Tery_5041	COG2124	cytochrome p450
Tery_5046	COG1413	lyase activity
Tery_5047	COG1413	lyase activity
Tery_5059	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tery_5060	COG0242	peptide deformylase activity
Tery_5066	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Tery_5067	COG0484	heat shock protein binding
Tery_5068	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Tery_5076	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Tery_5077	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Tery_5078	COG0508	dehydrogenase complex catalyzes the overall conversion of
Tery_5078	COG0022	dehydrogenase e1 component