Ava_0001 SM00382 ATPases associated with a variety of cellular activities Ava_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Ava_0002 SM00480 DNA polymerase III beta subunit Ava_0012 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_0018 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_0020 SM00028 Tetratricopeptide repeats Ava_0024 SM00387 Histidine kinase-like ATPases Ava_0024 SM00388 His Kinase A (phosphoacceptor) domain Ava_0027 SM00360 RNA recognition motif Ava_0030 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Ava_0030 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Ava_0030 SM00493 Ava_0030 Ava_0034 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ava_0039 SM00320 WD40 repeats Ava_0048 SM00382 ATPases associated with a variety of cellular activities Ava_0049 SM00567 E-Z type HEAT repeats Ava_0053 SM00912 haemagglutination activity domain Ava_0054 SM00028 Tetratricopeptide repeats Ava_0055 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_0055 SM00091 PAS domain Ava_0055 SM00387 Histidine kinase-like ATPases Ava_0058 SM00448 cheY-homologous receiver domain Ava_0059 SM00448 cheY-homologous receiver domain Ava_0060 SM00260 Two component signalling adaptor domain Ava_0061 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Ava_0061 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_0062 SM00073 Histidine Phosphotransfer domain Ava_0062 SM00260 Two component signalling adaptor domain Ava_0062 SM00387 Histidine kinase-like ATPases Ava_0062 SM00448 cheY-homologous receiver domain Ava_0062 SM01231 Ava_0062 Ava_0064 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0064 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_0064 SM00091 PAS domain Ava_0064 SM00387 Histidine kinase-like ATPases Ava_0064 SM00448 cheY-homologous receiver domain Ava_0065 SM00448 cheY-homologous receiver domain Ava_0066 SM00387 Histidine kinase-like ATPases Ava_0066 SM00388 His Kinase A (phosphoacceptor) domain Ava_0066 SM00448 cheY-homologous receiver domain Ava_0067 SM00382 ATPases associated with a variety of cellular activities Ava_0068 SM00382 ATPases associated with a variety of cellular activities Ava_0069 SM00382 ATPases associated with a variety of cellular activities Ava_0076 SM00382 ATPases associated with a variety of cellular activities Ava_0083 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0083 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_0083 SM00387 Histidine kinase-like ATPases Ava_0083 SM00388 His Kinase A (phosphoacceptor) domain Ava_0084 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_0085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_0091 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Ava_0091 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0091 SM00091 PAS domain Ava_0123 SM00052 Putative diguanylate phosphodiesterase Ava_0123 SM00267 diguanylate cyclase Ava_0123 SM00448 cheY-homologous receiver domain Ava_0124 SM00387 Histidine kinase-like ATPases Ava_0124 SM00448 cheY-homologous receiver domain Ava_0126 SM00382 ATPases associated with a variety of cellular activities Ava_0126 SM00393 Putative single-stranded nucleic acids-binding domain Ava_0128 SM00360 RNA recognition motif Ava_0135 SM00318 Staphylococcal nuclease homologues Ava_0137 SM00938 Nitrogen regulatory protein P-II Ava_0140 SM00382 ATPases associated with a variety of cellular activities Ava_0140 SM01086 C-terminal, D2-small domain, of ClpB protein Ava_0141 SM00387 Histidine kinase-like ATPases Ava_0144 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_0145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_0147 SM01230 Ava_0147 Ava_0153 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_0154 SM00829 Enoylreductase Ava_0172 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Ava_0173 SM00320 WD40 repeats Ava_0176 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Ava_0176 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Ava_0178 SM00382 ATPases associated with a variety of cellular activities Ava_0191 SM00382 ATPases associated with a variety of cellular activities Ava_0198 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_0198 SM00091 PAS domain Ava_0198 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_0198 SM00387 Histidine kinase-like ATPases Ava_0198 SM00388 His Kinase A (phosphoacceptor) domain Ava_0198 SM00448 cheY-homologous receiver domain Ava_0204 SM00028 Tetratricopeptide repeats Ava_0216 SM01150 Ava_0216 Ava_0224 SM00267 diguanylate cyclase Ava_0226 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Ava_0227 SM00507 HNH nucleases Ava_0229 SM00028 Tetratricopeptide repeats Ava_0238 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0238 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_0238 SM00091 PAS domain Ava_0238 SM00387 Histidine kinase-like ATPases Ava_0238 SM00388 His Kinase A (phosphoacceptor) domain Ava_0238 SM00448 cheY-homologous receiver domain Ava_0238 SM00862 Transcriptional regulatory protein, C terminal Ava_0239 SM00448 cheY-homologous receiver domain Ava_0243 SM00382 ATPases associated with a variety of cellular activities Ava_0254 SM00327 von Willebrand factor (vWF) type A domain Ava_0277 SM00382 ATPases associated with a variety of cellular activities Ava_0277 SM00962 SRP54-type protein, GTPase domain Ava_0277 SM00963 SRP54-type protein, helical bundle domain Ava_0278 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0278 SM00331 Sigma factor PP2C-like phosphatases Ava_0285 SM00833 Cobalamin synthesis protein cobW C-terminal domain Ava_0286 SM00320 WD40 repeats Ava_0292 SM00710 Parallel beta-helix repeats Ava_0299 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_0299 SM00245 tail specific protease Ava_0301 SM00421 helix_turn_helix, Lux Regulon Ava_0301 SM00448 cheY-homologous receiver domain Ava_0304 SM00331 Sigma factor PP2C-like phosphatases Ava_0304 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Ava_0305 SM00240 Forkhead associated domain Ava_0307 SM00240 Forkhead associated domain Ava_0310 SM01007 Class II Aldolase and Adducin N-terminal domain Ava_0313 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Ava_0313 SM00292 breast cancer carboxy-terminal domain Ava_0313 SM00532 Ligase N family Ava_0314 SM00091 PAS domain Ava_0314 SM00138 Methyltransferase, chemotaxis proteins Ava_0314 SM00387 Histidine kinase-like ATPases Ava_0314 SM00388 His Kinase A (phosphoacceptor) domain Ava_0314 SM00448 cheY-homologous receiver domain Ava_0315 SM00014 Acid phosphatase homologues Ava_0316 SM00567 E-Z type HEAT repeats Ava_0325 SM00382 ATPases associated with a variety of cellular activities Ava_0328 SM00849 Metallo-beta-lactamase superfamily Ava_0330 SM00382 ATPases associated with a variety of cellular activities Ava_0339 SM00930 Ava_0339 Ava_0341 SM00880 Ava_0341 Ava_0344 SM00925 MltA specific insert domain Ava_0347 SM01321 Ava_0347 Ava_0348 SM00028 Tetratricopeptide repeats Ava_0353 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_0353 SM00240 Forkhead associated domain Ava_0354 SM00331 Sigma factor PP2C-like phosphatases Ava_0354 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Ava_0355 SM00091 PAS domain Ava_0355 SM00387 Histidine kinase-like ATPases Ava_0355 SM00388 His Kinase A (phosphoacceptor) domain Ava_0362 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0362 SM00091 PAS domain Ava_0362 SM00387 Histidine kinase-like ATPases Ava_0362 SM00388 His Kinase A (phosphoacceptor) domain Ava_0362 SM00448 cheY-homologous receiver domain Ava_0375 SM00382 ATPases associated with a variety of cellular activities Ava_0379 SM00271 DnaJ molecular chaperone homology domain Ava_0389 SM00507 HNH nucleases Ava_0390 SM01005 Alanine racemase, C-terminal domain Ava_0402 SM00331 Sigma factor PP2C-like phosphatases Ava_0402 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Ava_0404 SM00244 prohibitin homologues Ava_0407 SM01211 Ava_0407 Ava_0413 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_0413 SM00091 PAS domain Ava_0413 SM00387 Histidine kinase-like ATPases Ava_0413 SM00388 His Kinase A (phosphoacceptor) domain Ava_0418 SM00382 ATPases associated with a variety of cellular activities Ava_0419 SM00028 Tetratricopeptide repeats Ava_0425 SM00382 ATPases associated with a variety of cellular activities Ava_0430 SM00859 Semialdehyde dehydrogenase, NAD binding domain Ava_0432 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_0432 SM00245 tail specific protease Ava_0434 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_0434 SM00710 Parallel beta-helix repeats Ava_0440 SM00838 Elongation factor G C-terminus Ava_0441 SM01207 Ava_0441 Ava_0444 SM00530 Helix-turn-helix XRE-family like proteins Ava_0463 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_0464 SM00930 Ava_0464 Ava_0470 SM00382 ATPases associated with a variety of cellular activities Ava_0473 SM00382 ATPases associated with a variety of cellular activities Ava_0483 SM00421 helix_turn_helix, Lux Regulon Ava_0495 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ava_0505 SM00073 Histidine Phosphotransfer domain Ava_0505 SM00260 Two component signalling adaptor domain Ava_0505 SM00387 Histidine kinase-like ATPases Ava_0505 SM00448 cheY-homologous receiver domain Ava_0505 SM01231 Ava_0505 Ava_0506 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Ava_0506 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_0507 SM00260 Two component signalling adaptor domain Ava_0508 SM00448 cheY-homologous receiver domain Ava_0509 SM00448 cheY-homologous receiver domain Ava_0516 SM00878 Biotin carboxylase C-terminal domain Ava_0521 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0521 SM00387 Histidine kinase-like ATPases Ava_0521 SM00388 His Kinase A (phosphoacceptor) domain Ava_0538 SM00448 cheY-homologous receiver domain Ava_0542 SM00028 Tetratricopeptide repeats Ava_0549 SM00316 Ribosomal protein S1-like RNA-binding domain Ava_0549 SM00357 Cold shock protein domain Ava_0549 SM00955 Ava_0549 Ava_0562 SM00563 Phosphate acyltransferases Ava_0575 SM00382 ATPases associated with a variety of cellular activities Ava_0581 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Ava_0581 SM00474 3'-5' exonuclease Ava_0581 SM00475 5'-3' exonuclease Ava_0581 SM00482 DNA polymerase A domain Ava_0582 SM00736 Dystroglycan-type cadherin-like domains. Ava_0583 SM00736 Dystroglycan-type cadherin-like domains. Ava_0586 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_0592 SM00852 Probable molybdopterin binding domain Ava_0599 SM00382 ATPases associated with a variety of cellular activities Ava_0612 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0612 SM00387 Histidine kinase-like ATPases Ava_0612 SM00388 His Kinase A (phosphoacceptor) domain Ava_0613 SM00387 Histidine kinase-like ATPases Ava_0613 SM00388 His Kinase A (phosphoacceptor) domain Ava_0615 SM00448 cheY-homologous receiver domain Ava_0615 SM00862 Transcriptional regulatory protein, C terminal Ava_0622 SM00382 ATPases associated with a variety of cellular activities Ava_0638 SM00091 PAS domain Ava_0638 SM00267 diguanylate cyclase Ava_0638 SM01080 Ava_0638 Ava_0639 SM00756 Ava_0639 Ava_0641 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_0642 SM00487 DEAD-like helicases superfamily Ava_0642 SM00490 helicase superfamily c-terminal domain Ava_0646 SM00849 Metallo-beta-lactamase superfamily Ava_0647 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0647 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_0647 SM00091 PAS domain Ava_0647 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_0647 SM00387 Histidine kinase-like ATPases Ava_0647 SM00388 His Kinase A (phosphoacceptor) domain Ava_0648 SM00052 Putative diguanylate phosphodiesterase Ava_0648 SM00448 cheY-homologous receiver domain Ava_0649 SM00387 Histidine kinase-like ATPases Ava_0649 SM00388 His Kinase A (phosphoacceptor) domain Ava_0649 SM00448 cheY-homologous receiver domain Ava_0659 SM00382 ATPases associated with a variety of cellular activities Ava_0661 SM00421 helix_turn_helix, Lux Regulon Ava_0661 SM00448 cheY-homologous receiver domain Ava_0662 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0662 SM00331 Sigma factor PP2C-like phosphatases Ava_0662 SM00448 cheY-homologous receiver domain Ava_0666 SM00028 Tetratricopeptide repeats Ava_0668 SM00474 3'-5' exonuclease Ava_0673 SM00382 ATPases associated with a variety of cellular activities Ava_0679 SM00052 Putative diguanylate phosphodiesterase Ava_0679 SM00267 diguanylate cyclase Ava_0682 SM00155 Phospholipase D. Active site motifs. Ava_0694 SM01382 Ava_0694 Ava_0694 SM01383 Ava_0694 Ava_0697 SM00322 K homology RNA-binding domain Ava_0701 SM01374 Ava_0701 Ava_0702 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Ava_0711 SM00316 Ribosomal protein S1-like RNA-binding domain Ava_0715 SM00662 RNA polymerases D Ava_0721 SM00937 Ava_0721 Ava_0722 SM00382 ATPases associated with a variety of cellular activities Ava_0725 SM00235 Zinc-dependent metalloprotease Ava_0730 SM01133 Ava_0730 Ava_0737 SM00382 ATPases associated with a variety of cellular activities Ava_0740 SM00062 Bacterial periplasmic substrate-binding proteins Ava_0758 SM00470 ParB-like nuclease domain Ava_0762 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_0774 SM00062 Bacterial periplasmic substrate-binding proteins Ava_0782 SM01094 CpcD/allophycocyanin linker domain Ava_0791 SM00448 cheY-homologous receiver domain Ava_0792 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_0792 SM00387 Histidine kinase-like ATPases Ava_0792 SM00388 His Kinase A (phosphoacceptor) domain Ava_0797 SM00358 Double-stranded RNA binding motif Ava_0797 SM00535 Ribonuclease III family Ava_0799 SM00387 Histidine kinase-like ATPases Ava_0814 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_0814 SM00245 tail specific protease Ava_0816 SM00382 ATPases associated with a variety of cellular activities Ava_0820 SM00240 Forkhead associated domain Ava_0821 SM00240 Forkhead associated domain Ava_0828 SM00052 Putative diguanylate phosphodiesterase Ava_0828 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_0828 SM00267 diguanylate cyclase Ava_0856 SM00853 MutL C terminal dimerisation domain Ava_0856 SM01340 Ava_0856 Ava_0864 SM00271 DnaJ molecular chaperone homology domain Ava_0873 SM00387 Histidine kinase-like ATPases Ava_0873 SM00388 His Kinase A (phosphoacceptor) domain Ava_0876 SM00382 ATPases associated with a variety of cellular activities Ava_0881 SM00173 Ras subfamily of RAS small GTPases Ava_0881 SM00175 Rab subfamily of small GTPases Ava_0893 SM00986 Uracil DNA glycosylase superfamily Ava_0893 SM00987 UreE urease accessory protein, C-terminal domain Ava_0894 SM00028 Tetratricopeptide repeats Ava_0901 SM00028 Tetratricopeptide repeats Ava_0910 SM00382 ATPases associated with a variety of cellular activities Ava_0910 SM01086 C-terminal, D2-small domain, of ClpB protein Ava_0916 SM00271 DnaJ molecular chaperone homology domain Ava_0918 SM00271 DnaJ molecular chaperone homology domain Ava_0924 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Ava_0928 SM00028 Tetratricopeptide repeats Ava_0928 SM00271 DnaJ molecular chaperone homology domain Ava_0934 SM00855 Phosphoglycerate mutase family Ava_0945 SM00382 ATPases associated with a variety of cellular activities Ava_0951 SM00487 DEAD-like helicases superfamily Ava_0951 SM00490 helicase superfamily c-terminal domain Ava_0954 SM00829 Enoylreductase Ava_0957 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Ava_0961 SM00481 DNA polymerase alpha chain like domain Ava_0967 SM00925 MltA specific insert domain Ava_0972 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_0973 SM01057 Eukaryotic-type carbonic anhydrase Ava_0974 SM00360 RNA recognition motif Ava_0982 SM00318 Staphylococcal nuclease homologues Ava_0984 SM00028 Tetratricopeptide repeats Ava_0984 SM00271 DnaJ molecular chaperone homology domain Ava_0988 SM00382 ATPases associated with a variety of cellular activities Ava_0989 SM00062 Bacterial periplasmic substrate-binding proteins Ava_0989 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Ava_0990 SM00947 Carbonic anhydrase Ava_0991 SM00947 Carbonic anhydrase Ava_0993 SM00232 JAB/MPN domain Ava_0994 SM00450 Rhodanese Homology Domain Ava_0996 SM00567 E-Z type HEAT repeats Ava_1003 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1003 SM00387 Histidine kinase-like ATPases Ava_1003 SM00388 His Kinase A (phosphoacceptor) domain Ava_1004 SM00448 cheY-homologous receiver domain Ava_1005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_1005 SM00091 PAS domain Ava_1005 SM00387 Histidine kinase-like ATPases Ava_1005 SM00388 His Kinase A (phosphoacceptor) domain Ava_1005 SM00448 cheY-homologous receiver domain Ava_1008 SM00382 ATPases associated with a variety of cellular activities Ava_1009 SM00028 Tetratricopeptide repeats Ava_1012 SM00363 S4 RNA-binding domain Ava_1017 SM01248 Ava_1017 Ava_1020 SM01247 Ava_1020 Ava_1021 SM00387 Histidine kinase-like ATPases Ava_1021 SM00388 His Kinase A (phosphoacceptor) domain Ava_1021 SM00448 cheY-homologous receiver domain Ava_1023 SM00046 Diacylglycerol kinase catalytic domain (presumed) Ava_1024 SM00382 ATPases associated with a variety of cellular activities Ava_1025 SM00382 ATPases associated with a variety of cellular activities Ava_1029 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1029 SM00073 Histidine Phosphotransfer domain Ava_1029 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_1029 SM00091 PAS domain Ava_1029 SM00387 Histidine kinase-like ATPases Ava_1029 SM00388 His Kinase A (phosphoacceptor) domain Ava_1029 SM00448 cheY-homologous receiver domain Ava_1030 SM00267 diguanylate cyclase Ava_1030 SM00448 cheY-homologous receiver domain Ava_1049 SM00897 FIST N domain Ava_1049 SM01204 Ava_1049 Ava_1050 SM01093 Ava_1050 Ava_1061 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1065 SM00327 von Willebrand factor (vWF) type A domain Ava_1066 SM00327 von Willebrand factor (vWF) type A domain Ava_1077 SM00899 Ava_1077 Ava_1080 SM00890 Domain of unknown function Ava_1086 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1086 SM00091 PAS domain Ava_1086 SM00387 Histidine kinase-like ATPases Ava_1086 SM00388 His Kinase A (phosphoacceptor) domain Ava_1086 SM00448 cheY-homologous receiver domain Ava_1089 SM00829 Enoylreductase Ava_1097 SM00382 ATPases associated with a variety of cellular activities Ava_1102 SM00448 cheY-homologous receiver domain Ava_1103 SM00327 von Willebrand factor (vWF) type A domain Ava_1105 SM00028 Tetratricopeptide repeats Ava_1114 SM00858 Ava_1114 Ava_1118 SM00382 ATPases associated with a variety of cellular activities Ava_1126 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_1128 SM00382 ATPases associated with a variety of cellular activities Ava_1129 SM00382 ATPases associated with a variety of cellular activities Ava_1133 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1134 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_1137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_1138 SM00091 PAS domain Ava_1138 SM00342 helix_turn_helix, arabinose operon control protein Ava_1149 SM00387 Histidine kinase-like ATPases Ava_1149 SM00388 His Kinase A (phosphoacceptor) domain Ava_1153 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_1156 SM00487 DEAD-like helicases superfamily Ava_1162 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1168 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1168 SM00387 Histidine kinase-like ATPases Ava_1168 SM00388 His Kinase A (phosphoacceptor) domain Ava_1172 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_1172 SM00924 MgtE intracellular N domain Ava_1175 SM00387 Histidine kinase-like ATPases Ava_1178 SM00028 Tetratricopeptide repeats Ava_1184 SM00530 Helix-turn-helix XRE-family like proteins Ava_1188 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_1188 SM00382 ATPases associated with a variety of cellular activities Ava_1197 SM00487 DEAD-like helicases superfamily Ava_1197 SM00490 helicase superfamily c-terminal domain Ava_1204 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ava_1210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1210 SM00387 Histidine kinase-like ATPases Ava_1223 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1234 SM00382 ATPases associated with a variety of cellular activities Ava_1238 SM00825 Beta-ketoacyl synthase Ava_1248 SM00382 ATPases associated with a variety of cellular activities Ava_1258 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1262 SM00382 ATPases associated with a variety of cellular activities Ava_1263 SM00448 cheY-homologous receiver domain Ava_1263 SM00862 Transcriptional regulatory protein, C terminal Ava_1271 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Ava_1271 SM01232 Ava_1271 Ava_1280 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1281 SM00316 Ribosomal protein S1-like RNA-binding domain Ava_1285 SM00464 Found in ATP-dependent protease La (LON) Ava_1286 SM01403 Ava_1286 Ava_1288 SM00838 Elongation factor G C-terminus Ava_1288 SM00889 Elongation factor G, domain IV Ava_1304 SM00271 DnaJ molecular chaperone homology domain Ava_1307 SM00327 von Willebrand factor (vWF) type A domain Ava_1308 SM00327 von Willebrand factor (vWF) type A domain Ava_1315 SM00257 Lysin motif Ava_1322 SM00955 Ava_1322 Ava_1325 SM00487 DEAD-like helicases superfamily Ava_1325 SM00490 helicase superfamily c-terminal domain Ava_1327 SM01321 Ava_1327 Ava_1328 SM00490 helicase superfamily c-terminal domain Ava_1331 SM00382 ATPases associated with a variety of cellular activities Ava_1335 SM00155 Phospholipase D. Active site motifs. Ava_1339 SM00320 WD40 repeats Ava_1343 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_1343 SM00091 PAS domain Ava_1343 SM00387 Histidine kinase-like ATPases Ava_1343 SM00388 His Kinase A (phosphoacceptor) domain Ava_1343 SM00448 cheY-homologous receiver domain Ava_1351 SM00271 DnaJ molecular chaperone homology domain Ava_1352 SM00327 von Willebrand factor (vWF) type A domain Ava_1352 SM00609 Vault protein Inter-alpha-Trypsin domain Ava_1359 SM00327 von Willebrand factor (vWF) type A domain Ava_1369 SM00849 Metallo-beta-lactamase superfamily Ava_1369 SM00903 Flavin reductase like domain Ava_1371 SM00849 Metallo-beta-lactamase superfamily Ava_1371 SM00903 Flavin reductase like domain Ava_1373 SM00633 Glycosyl hydrolase family 10 Ava_1390 SM00912 haemagglutination activity domain Ava_1397 SM00244 prohibitin homologues Ava_1398 SM00244 prohibitin homologues Ava_1404 SM00567 E-Z type HEAT repeats Ava_1409 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Ava_1423 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1423 SM00448 cheY-homologous receiver domain Ava_1427 SM00642 Alpha-amylase domain Ava_1428 SM00642 Alpha-amylase domain Ava_1429 SM00642 Alpha-amylase domain Ava_1429 SM01065 Starch binding domain Ava_1433 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_1433 SM00382 ATPases associated with a variety of cellular activities Ava_1436 SM00967 RNA 2'-O ribose methyltransferase substrate binding Ava_1438 SM00849 Metallo-beta-lactamase superfamily Ava_1438 SM00903 Flavin reductase like domain Ava_1439 SM00849 Metallo-beta-lactamase superfamily Ava_1439 SM00903 Flavin reductase like domain Ava_1444 SM00028 Tetratricopeptide repeats Ava_1447 SM00448 cheY-homologous receiver domain Ava_1447 SM00862 Transcriptional regulatory protein, C terminal Ava_1452 SM00382 ATPases associated with a variety of cellular activities Ava_1465 SM00646 Ava_1465 Ava_1466 SM00646 Ava_1466 Ava_1473 SM00460 Transglutaminase/protease-like homologues Ava_1475 SM00072 Guanylate kinase homologues. Ava_1486 SM00388 His Kinase A (phosphoacceptor) domain Ava_1491 SM00861 Transketolase, pyrimidine binding domain Ava_1493 SM00173 Ras subfamily of RAS small GTPases Ava_1493 SM00175 Rab subfamily of small GTPases Ava_1493 SM00364 Leucine-rich repeats, bacterial type Ava_1493 SM00365 Leucine-rich repeat, SDS22-like subfamily Ava_1493 SM00369 Leucine-rich repeats, typical (most populated) subfamily Ava_1494 SM00530 Helix-turn-helix XRE-family like proteins Ava_1495 SM00382 ATPases associated with a variety of cellular activities Ava_1496 SM01234 Ava_1496 Ava_1498 SM00448 cheY-homologous receiver domain Ava_1498 SM00862 Transcriptional regulatory protein, C terminal Ava_1505 SM00316 Ribosomal protein S1-like RNA-binding domain Ava_1519 SM00382 ATPases associated with a variety of cellular activities Ava_1534 SM00316 Ribosomal protein S1-like RNA-binding domain Ava_1534 SM00732 Likely ribonuclease with RNase H fold. Ava_1536 SM00382 ATPases associated with a variety of cellular activities Ava_1541 SM00320 WD40 repeats Ava_1549 SM00240 Forkhead associated domain Ava_1552 SM00028 Tetratricopeptide repeats Ava_1556 SM00320 WD40 repeats Ava_1558 SM00421 helix_turn_helix, Lux Regulon Ava_1558 SM00448 cheY-homologous receiver domain Ava_1559 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_1559 SM00091 PAS domain Ava_1559 SM00387 Histidine kinase-like ATPases Ava_1559 SM00388 His Kinase A (phosphoacceptor) domain Ava_1560 SM00448 cheY-homologous receiver domain Ava_1561 SM00387 Histidine kinase-like ATPases Ava_1561 SM00388 His Kinase A (phosphoacceptor) domain Ava_1561 SM00448 cheY-homologous receiver domain Ava_1562 SM00387 Histidine kinase-like ATPases Ava_1562 SM00388 His Kinase A (phosphoacceptor) domain Ava_1562 SM00448 cheY-homologous receiver domain Ava_1564 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1564 SM00073 Histidine Phosphotransfer domain Ava_1564 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_1564 SM00091 PAS domain Ava_1564 SM00387 Histidine kinase-like ATPases Ava_1564 SM00388 His Kinase A (phosphoacceptor) domain Ava_1564 SM00448 cheY-homologous receiver domain Ava_1566 SM00331 Sigma factor PP2C-like phosphatases Ava_1566 SM00448 cheY-homologous receiver domain Ava_1582 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_1590 SM01133 Ava_1590 Ava_1591 SM00028 Tetratricopeptide repeats Ava_1592 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_1598 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1600 SM00382 ATPases associated with a variety of cellular activities Ava_1603 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Ava_1603 SM00481 DNA polymerase alpha chain like domain Ava_1609 SM00822 Ava_1609 Ava_1609 SM00823 Phosphopantetheine attachment site Ava_1610 SM00823 Phosphopantetheine attachment site Ava_1611 SM00823 Phosphopantetheine attachment site Ava_1612 SM00823 Phosphopantetheine attachment site Ava_1612 SM00825 Beta-ketoacyl synthase Ava_1612 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_1613 SM00823 Phosphopantetheine attachment site Ava_1613 SM01294 Ava_1613 Ava_1617 SM00382 ATPases associated with a variety of cellular activities Ava_1622 SM00382 ATPases associated with a variety of cellular activities Ava_1624 SM00320 WD40 repeats Ava_1626 SM00448 cheY-homologous receiver domain Ava_1627 SM00448 cheY-homologous receiver domain Ava_1628 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_1628 SM00091 PAS domain Ava_1628 SM00387 Histidine kinase-like ATPases Ava_1628 SM00388 His Kinase A (phosphoacceptor) domain Ava_1629 SM00448 cheY-homologous receiver domain Ava_1629 SM00862 Transcriptional regulatory protein, C terminal Ava_1638 SM00382 ATPases associated with a variety of cellular activities Ava_1644 SM00752 Horizontally Transferred TransMembrane Domain Ava_1647 SM00823 Phosphopantetheine attachment site Ava_1647 SM01294 Ava_1647 Ava_1655 SM00861 Transketolase, pyrimidine binding domain Ava_1662 SM00450 Rhodanese Homology Domain Ava_1678 SM00028 Tetratricopeptide repeats Ava_1679 SM00360 RNA recognition motif Ava_1700 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_1700 SM01324 Ava_1700 Ava_1708 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_1714 SM00382 ATPases associated with a variety of cellular activities Ava_1716 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_1716 SM00091 PAS domain Ava_1716 SM00387 Histidine kinase-like ATPases Ava_1716 SM00388 His Kinase A (phosphoacceptor) domain Ava_1716 SM00448 cheY-homologous receiver domain Ava_1719 SM00387 Histidine kinase-like ATPases Ava_1719 SM00388 His Kinase A (phosphoacceptor) domain Ava_1730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_1731 SM00478 endonuclease III Ava_1731 SM00525 Ava_1731 Ava_1750 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_1751 SM00836 DALR anticodon binding domain Ava_1753 SM00382 ATPases associated with a variety of cellular activities Ava_1756 SM00382 ATPases associated with a variety of cellular activities Ava_1767 SM00411 bacterial (prokaryotic) histone like domain Ava_1777 SM00448 cheY-homologous receiver domain Ava_1777 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ava_1779 SM00450 Rhodanese Homology Domain Ava_1784 SM00881 CoA binding domain Ava_1792 SM00450 Rhodanese Homology Domain Ava_1793 SM00849 Metallo-beta-lactamase superfamily Ava_1794 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_1795 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1797 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_1802 SM00849 Metallo-beta-lactamase superfamily Ava_1802 SM00903 Flavin reductase like domain Ava_1803 SM00849 Metallo-beta-lactamase superfamily Ava_1803 SM00903 Flavin reductase like domain Ava_1809 SM01001 AIR carboxylase Ava_1816 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_1820 SM00363 S4 RNA-binding domain Ava_1830 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_1832 SM00933 Ava_1832 Ava_1837 SM00864 Tubulin/FtsZ family, GTPase domain Ava_1837 SM00865 Tubulin/FtsZ family, C-terminal domain Ava_1841 SM00320 WD40 repeats Ava_1870 SM00322 K homology RNA-binding domain Ava_1877 SM00382 ATPases associated with a variety of cellular activities Ava_1878 SM00448 cheY-homologous receiver domain Ava_1878 SM00862 Transcriptional regulatory protein, C terminal Ava_1882 SM00710 Parallel beta-helix repeats Ava_1886 SM00230 Calpain-like thiol protease family. Ava_1888 SM00567 E-Z type HEAT repeats Ava_1889 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_1893 SM00851 MGS-like domain Ava_1893 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ava_1901 SM00831 Cation transporter/ATPase, N-terminus Ava_1902 SM00382 ATPases associated with a variety of cellular activities Ava_1904 SM00831 Cation transporter/ATPase, N-terminus Ava_1908 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Ava_1914 SM00474 3'-5' exonuclease Ava_1915 SM00450 Rhodanese Homology Domain Ava_1917 SM00448 cheY-homologous receiver domain Ava_1917 SM00862 Transcriptional regulatory protein, C terminal Ava_1922 SM00448 cheY-homologous receiver domain Ava_1922 SM00862 Transcriptional regulatory protein, C terminal Ava_1933 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ava_1941 SM00382 ATPases associated with a variety of cellular activities Ava_1942 SM00382 ATPases associated with a variety of cellular activities Ava_1944 SM00448 cheY-homologous receiver domain Ava_1944 SM00862 Transcriptional regulatory protein, C terminal Ava_1945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_1945 SM00387 Histidine kinase-like ATPases Ava_1945 SM00388 His Kinase A (phosphoacceptor) domain Ava_1946 SM01004 Delta-aminolevulinic acid dehydratase Ava_1948 SM00833 Cobalamin synthesis protein cobW C-terminal domain Ava_1952 SM00487 DEAD-like helicases superfamily Ava_1952 SM00490 helicase superfamily c-terminal domain Ava_1954 SM00387 Histidine kinase-like ATPases Ava_1954 SM00388 His Kinase A (phosphoacceptor) domain Ava_1955 SM00382 ATPases associated with a variety of cellular activities Ava_1972 SM01118 Ava_1972 Ava_1975 SM00347 helix_turn_helix multiple antibiotic resistance protein Ava_1980 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_1980 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_1980 SM00387 Histidine kinase-like ATPases Ava_1980 SM00388 His Kinase A (phosphoacceptor) domain Ava_1984 SM00360 RNA recognition motif Ava_1993 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ava_1994 SM01400 Ava_1994 Ava_2004 SM00028 Tetratricopeptide repeats Ava_2016 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Ava_2017 SM00642 Alpha-amylase domain Ava_2022 SM00271 DnaJ molecular chaperone homology domain Ava_2027 SM00387 Histidine kinase-like ATPases Ava_2028 SM00421 helix_turn_helix, Lux Regulon Ava_2028 SM00448 cheY-homologous receiver domain Ava_2045 SM00382 ATPases associated with a variety of cellular activities Ava_2050 SM00382 ATPases associated with a variety of cellular activities Ava_2053 SM00788 Adenylosuccinate synthetase Ava_2058 SM00487 DEAD-like helicases superfamily Ava_2058 SM00490 helicase superfamily c-terminal domain Ava_2078 SM00852 Probable molybdopterin binding domain Ava_2084 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2104 SM00320 WD40 repeats Ava_2109 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2109 SM01080 Ava_2109 Ava_2111 SM00917 LeuA allosteric (dimerisation) domain Ava_2113 SM00487 DEAD-like helicases superfamily Ava_2113 SM00490 helicase superfamily c-terminal domain Ava_2118 SM00904 Riboflavin kinase Ava_2124 SM00957 SecA DEAD-like domain Ava_2124 SM00958 SecA preprotein cross-linking domain Ava_2125 SM00487 DEAD-like helicases superfamily Ava_2125 SM00490 helicase superfamily c-terminal domain Ava_2125 SM00507 HNH nucleases Ava_2131 SM00028 Tetratricopeptide repeats Ava_2141 SM00563 Phosphate acyltransferases Ava_2147 SM00320 WD40 repeats Ava_2148 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_2148 SM00387 Histidine kinase-like ATPases Ava_2148 SM00388 His Kinase A (phosphoacceptor) domain Ava_2148 SM00448 cheY-homologous receiver domain Ava_2149 SM00387 Histidine kinase-like ATPases Ava_2149 SM00388 His Kinase A (phosphoacceptor) domain Ava_2149 SM00448 cheY-homologous receiver domain Ava_2150 SM00387 Histidine kinase-like ATPases Ava_2150 SM00448 cheY-homologous receiver domain Ava_2151 SM00897 FIST N domain Ava_2151 SM01204 Ava_2151 Ava_2152 SM00387 Histidine kinase-like ATPases Ava_2162 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_2165 SM00947 Carbonic anhydrase Ava_2167 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Ava_2170 SM00354 helix_turn _helix lactose operon repressor Ava_2172 SM00382 ATPases associated with a variety of cellular activities Ava_2176 SM00387 Histidine kinase-like ATPases Ava_2176 SM00388 His Kinase A (phosphoacceptor) domain Ava_2177 SM00855 Phosphoglycerate mutase family Ava_2183 SM00320 WD40 repeats Ava_2184 SM00320 WD40 repeats Ava_2187 SM00382 ATPases associated with a variety of cellular activities Ava_2189 SM00487 DEAD-like helicases superfamily Ava_2189 SM00490 helicase superfamily c-terminal domain Ava_2195 SM00530 Helix-turn-helix XRE-family like proteins Ava_2199 SM00487 DEAD-like helicases superfamily Ava_2199 SM00490 helicase superfamily c-terminal domain Ava_2212 SM00028 Tetratricopeptide repeats Ava_2215 SM00382 ATPases associated with a variety of cellular activities Ava_2221 SM00873 B3/4 domain Ava_2221 SM00874 tRNA synthetase B5 domain Ava_2221 SM00896 Ferredoxin-fold anticodon binding domain Ava_2222 SM00670 Large family of predicted nucleotide-binding domains Ava_2223 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_2224 SM00382 ATPases associated with a variety of cellular activities Ava_2234 SM00382 ATPases associated with a variety of cellular activities Ava_2239 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Ava_2239 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2239 SM00387 Histidine kinase-like ATPases Ava_2239 SM00388 His Kinase A (phosphoacceptor) domain Ava_2239 SM00448 cheY-homologous receiver domain Ava_2251 SM00382 ATPases associated with a variety of cellular activities Ava_2253 SM00493 Ava_2253 Ava_2254 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2254 SM00421 helix_turn_helix, Lux Regulon Ava_2268 SM00287 Bacterial SH3 domain homologues Ava_2268 SM00646 Ava_2268 Ava_2293 SM00382 ATPases associated with a variety of cellular activities Ava_2298 SM00382 ATPases associated with a variety of cellular activities Ava_2303 SM00382 ATPases associated with a variety of cellular activities Ava_2310 SM00563 Phosphate acyltransferases Ava_2312 SM00909 Sporulation and spore germination Ava_2313 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_2315 SM00841 Elongation factor P, C-terminal Ava_2315 SM01185 Ava_2315 Ava_2318 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ava_2323 SM00226 Low molecular weight phosphatase family Ava_2324 SM00421 helix_turn_helix, Lux Regulon Ava_2324 SM00448 cheY-homologous receiver domain Ava_2328 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2328 SM00388 His Kinase A (phosphoacceptor) domain Ava_2335 SM00382 ATPases associated with a variety of cellular activities Ava_2335 SM01086 C-terminal, D2-small domain, of ClpB protein Ava_2347 SM00829 Enoylreductase Ava_2349 SM00912 haemagglutination activity domain Ava_2350 SM00912 haemagglutination activity domain Ava_2351 SM00912 haemagglutination activity domain Ava_2352 SM00912 haemagglutination activity domain Ava_2353 SM00912 haemagglutination activity domain Ava_2357 SM01359 Ava_2357 Ava_2357 SM01360 Ava_2357 Ava_2361 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_2361 SM01091 Transporter associated domain Ava_2380 SM00852 Probable molybdopterin binding domain Ava_2398 SM00382 ATPases associated with a variety of cellular activities Ava_2402 SM01080 Ava_2402 Ava_2410 SM00257 Lysin motif Ava_2411 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_2419 SM00448 cheY-homologous receiver domain Ava_2420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_2420 SM00091 PAS domain Ava_2420 SM00387 Histidine kinase-like ATPases Ava_2420 SM00388 His Kinase A (phosphoacceptor) domain Ava_2420 SM00448 cheY-homologous receiver domain Ava_2421 SM00267 diguanylate cyclase Ava_2421 SM00448 cheY-homologous receiver domain Ava_2421 SM00862 Transcriptional regulatory protein, C terminal Ava_2430 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_2430 SM00924 MgtE intracellular N domain Ava_2435 SM00382 ATPases associated with a variety of cellular activities Ava_2439 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_2439 SM00387 Histidine kinase-like ATPases Ava_2439 SM00388 His Kinase A (phosphoacceptor) domain Ava_2440 SM00448 cheY-homologous receiver domain Ava_2440 SM00862 Transcriptional regulatory protein, C terminal Ava_2444 SM00382 ATPases associated with a variety of cellular activities Ava_2458 SM00919 Malic enzyme, NAD binding domain Ava_2458 SM01274 Ava_2458 Ava_2459 SM00333 Tudor domain Ava_2461 SM01240 Ava_2461 Ava_2466 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_2466 SM00387 Histidine kinase-like ATPases Ava_2473 SM00240 Forkhead associated domain Ava_2480 SM00382 ATPases associated with a variety of cellular activities Ava_2491 SM00091 PAS domain Ava_2491 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_2499 SM00320 WD40 repeats Ava_2507 SM00271 DnaJ molecular chaperone homology domain Ava_2514 SM00382 ATPases associated with a variety of cellular activities Ava_2517 SM00387 Histidine kinase-like ATPases Ava_2517 SM00433 TopoisomeraseII Ava_2519 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2524 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2524 SM00387 Histidine kinase-like ATPases Ava_2524 SM00388 His Kinase A (phosphoacceptor) domain Ava_2527 SM01350 Ava_2527 Ava_2528 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2530 SM00912 haemagglutination activity domain Ava_2551 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Ava_2551 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Ava_2552 SM00649 Ribosomal protein L11/L12 Ava_2562 SM00387 Histidine kinase-like ATPases Ava_2562 SM00388 His Kinase A (phosphoacceptor) domain Ava_2562 SM00448 cheY-homologous receiver domain Ava_2563 SM00387 Histidine kinase-like ATPases Ava_2563 SM00388 His Kinase A (phosphoacceptor) domain Ava_2563 SM00448 cheY-homologous receiver domain Ava_2563 SM01080 Ava_2563 Ava_2565 SM00028 Tetratricopeptide repeats Ava_2580 SM00028 Tetratricopeptide repeats Ava_2588 SM00470 ParB-like nuclease domain Ava_2590 SM00825 Beta-ketoacyl synthase Ava_2590 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_2591 SM00822 Ava_2591 Ava_2592 SM00825 Beta-ketoacyl synthase Ava_2593 SM00825 Beta-ketoacyl synthase Ava_2593 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_2595 SM00823 Phosphopantetheine attachment site Ava_2599 SM00382 ATPases associated with a variety of cellular activities Ava_2623 SM01094 CpcD/allophycocyanin linker domain Ava_2629 SM00320 WD40 repeats Ava_2630 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_2635 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Ava_2651 SM00463 Small MutS-related domain Ava_2651 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Ava_2651 SM00534 ATPase domain of DNA mismatch repair MUTS family Ava_2653 SM01240 Ava_2653 Ava_2673 SM00382 ATPases associated with a variety of cellular activities Ava_2675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_2675 SM00091 PAS domain Ava_2675 SM00387 Histidine kinase-like ATPases Ava_2675 SM00388 His Kinase A (phosphoacceptor) domain Ava_2675 SM00448 cheY-homologous receiver domain Ava_2682 SM00382 ATPases associated with a variety of cellular activities Ava_2684 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2696 SM00341 Helicase and RNase D C-terminal Ava_2696 SM00421 helix_turn_helix, Lux Regulon Ava_2696 SM00487 DEAD-like helicases superfamily Ava_2696 SM00490 helicase superfamily c-terminal domain Ava_2696 SM00956 Ava_2696 Ava_2710 SM00052 Putative diguanylate phosphodiesterase Ava_2710 SM00091 PAS domain Ava_2710 SM00267 diguanylate cyclase Ava_2712 SM00855 Phosphoglycerate mutase family Ava_2724 SM00563 Phosphate acyltransferases Ava_2730 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_2731 SM00563 Phosphate acyltransferases Ava_2736 SM00028 Tetratricopeptide repeats Ava_2736 SM00271 DnaJ molecular chaperone homology domain Ava_2751 SM00448 cheY-homologous receiver domain Ava_2766 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_2766 SM01091 Transporter associated domain Ava_2767 SM00487 DEAD-like helicases superfamily Ava_2767 SM00490 helicase superfamily c-terminal domain Ava_2767 SM00982 Ava_2767 Ava_2767 SM01058 CarD-like/TRCF domain Ava_2771 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2771 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_2771 SM00091 PAS domain Ava_2771 SM00387 Histidine kinase-like ATPases Ava_2771 SM00388 His Kinase A (phosphoacceptor) domain Ava_2771 SM00448 cheY-homologous receiver domain Ava_2776 SM00318 Staphylococcal nuclease homologues Ava_2777 SM01011 Aminopeptidase P, N-terminal domain Ava_2784 SM00937 Ava_2784 Ava_2787 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Ava_2791 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2803 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2803 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2803 SM00387 Histidine kinase-like ATPases Ava_2806 SM01080 Ava_2806 Ava_2808 SM00028 Tetratricopeptide repeats Ava_2809 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2810 SM00912 haemagglutination activity domain Ava_2811 SM00912 haemagglutination activity domain Ava_2813 SM00347 helix_turn_helix multiple antibiotic resistance protein Ava_2817 SM00320 WD40 repeats Ava_2825 SM00450 Rhodanese Homology Domain Ava_2827 SM00563 Phosphate acyltransferases Ava_2830 SM00382 ATPases associated with a variety of cellular activities Ava_2833 SM01006 Siderophore biosynthesis protein domain Ava_2836 SM01006 Siderophore biosynthesis protein domain Ava_2845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2845 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2845 SM00387 Histidine kinase-like ATPases Ava_2851 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_2851 SM00320 WD40 repeats Ava_2852 SM00382 ATPases associated with a variety of cellular activities Ava_2854 SM00434 DNA Topoisomerase IV Ava_2855 SM00448 cheY-homologous receiver domain Ava_2856 SM00028 Tetratricopeptide repeats Ava_2860 SM00382 ATPases associated with a variety of cellular activities Ava_2891 SM00320 WD40 repeats Ava_2902 SM00487 DEAD-like helicases superfamily Ava_2902 SM00490 helicase superfamily c-terminal domain Ava_2902 SM01142 Ava_2902 Ava_2907 SM01207 Ava_2907 Ava_2923 SM00448 cheY-homologous receiver domain Ava_2924 SM00363 S4 RNA-binding domain Ava_2927 SM01094 CpcD/allophycocyanin linker domain Ava_2928 SM00567 E-Z type HEAT repeats Ava_2929 SM00567 E-Z type HEAT repeats Ava_2932 SM01094 CpcD/allophycocyanin linker domain Ava_2933 SM01094 CpcD/allophycocyanin linker domain Ava_2934 SM00567 E-Z type HEAT repeats Ava_2944 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_2944 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_2944 SM00091 PAS domain Ava_2944 SM00387 Histidine kinase-like ATPases Ava_2944 SM00388 His Kinase A (phosphoacceptor) domain Ava_2953 SM01001 AIR carboxylase Ava_2961 SM00382 ATPases associated with a variety of cellular activities Ava_2963 SM00382 ATPases associated with a variety of cellular activities Ava_2965 SM00822 Ava_2965 Ava_2971 SM00320 WD40 repeats Ava_2975 SM00028 Tetratricopeptide repeats Ava_2980 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Ava_2987 SM01329 Ava_2987 Ava_2989 SM00219 Tyrosine kinase, catalytic domain Ava_3003 SM00091 PAS domain Ava_3003 SM00387 Histidine kinase-like ATPases Ava_3003 SM00388 His Kinase A (phosphoacceptor) domain Ava_3003 SM00448 cheY-homologous receiver domain Ava_3004 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3004 SM00091 PAS domain Ava_3004 SM00387 Histidine kinase-like ATPases Ava_3005 SM00448 cheY-homologous receiver domain Ava_3006 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_3009 SM00387 Histidine kinase-like ATPases Ava_3009 SM00388 His Kinase A (phosphoacceptor) domain Ava_3009 SM00448 cheY-homologous receiver domain Ava_3015 SM01116 Ava_3015 Ava_3017 SM00382 ATPases associated with a variety of cellular activities Ava_3018 SM00244 prohibitin homologues Ava_3020 SM00382 ATPases associated with a variety of cellular activities Ava_3033 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3033 SM00387 Histidine kinase-like ATPases Ava_3033 SM00388 His Kinase A (phosphoacceptor) domain Ava_3036 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3037 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_3043 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_3043 SM00091 PAS domain Ava_3043 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_3043 SM00387 Histidine kinase-like ATPases Ava_3043 SM00388 His Kinase A (phosphoacceptor) domain Ava_3043 SM00448 cheY-homologous receiver domain Ava_3046 SM00890 Domain of unknown function Ava_3052 SM01018 B12 binding domain Ava_3056 SM00028 Tetratricopeptide repeats Ava_3066 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_3066 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_3072 SM00421 helix_turn_helix, Lux Regulon Ava_3073 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_3078 SM00320 WD40 repeats Ava_3079 SM00320 WD40 repeats Ava_3081 SM00358 Double-stranded RNA binding motif Ava_3081 SM00535 Ribonuclease III family Ava_3084 SM00327 von Willebrand factor (vWF) type A domain Ava_3084 SM00382 ATPases associated with a variety of cellular activities Ava_3089 SM00448 cheY-homologous receiver domain Ava_3104 SM00248 ankyrin repeats Ava_3120 SM00857 Resolvase, N terminal domain Ava_3124 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_3132 SM00360 RNA recognition motif Ava_3135 SM00710 Parallel beta-helix repeats Ava_3156 SM00028 Tetratricopeptide repeats Ava_3159 SM00387 Histidine kinase-like ATPases Ava_3159 SM00388 His Kinase A (phosphoacceptor) domain Ava_3166 SM00448 cheY-homologous receiver domain Ava_3170 SM00267 diguanylate cyclase Ava_3170 SM00448 cheY-homologous receiver domain Ava_3171 SM00387 Histidine kinase-like ATPases Ava_3171 SM00388 His Kinase A (phosphoacceptor) domain Ava_3171 SM01248 Ava_3171 Ava_3177 SM00028 Tetratricopeptide repeats Ava_3178 SM00710 Parallel beta-helix repeats Ava_3186 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Ava_3186 SM00534 ATPase domain of DNA mismatch repair MUTS family Ava_3187 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_3187 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_3190 SM00382 ATPases associated with a variety of cellular activities Ava_3195 SM00257 Lysin motif Ava_3204 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3216 SM00917 LeuA allosteric (dimerisation) domain Ava_3225 SM00905 Dihydroneopterin aldolase Ava_3226 SM00091 PAS domain Ava_3226 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_3226 SM00387 Histidine kinase-like ATPases Ava_3226 SM00388 His Kinase A (phosphoacceptor) domain Ava_3227 SM01209 Ava_3227 Ava_3227 SM01210 Ava_3227 Ava_3234 SM00267 diguanylate cyclase Ava_3243 SM00530 Helix-turn-helix XRE-family like proteins Ava_3253 SM00487 DEAD-like helicases superfamily Ava_3253 SM00490 helicase superfamily c-terminal domain Ava_3255 SM00028 Tetratricopeptide repeats Ava_3259 SM00507 HNH nucleases Ava_3265 SM00736 Dystroglycan-type cadherin-like domains. Ava_3273 SM00487 DEAD-like helicases superfamily Ava_3274 SM00966 SpoVT / AbrB like domain Ava_3275 SM00320 WD40 repeats Ava_3277 SM00487 DEAD-like helicases superfamily Ava_3277 SM00490 helicase superfamily c-terminal domain Ava_3279 SM00316 Ribosomal protein S1-like RNA-binding domain Ava_3279 SM00322 K homology RNA-binding domain Ava_3281 SM00732 Likely ribonuclease with RNase H fold. Ava_3283 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_3283 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_3286 SM00382 ATPases associated with a variety of cellular activities Ava_3288 SM00244 prohibitin homologues Ava_3294 SM00838 Elongation factor G C-terminus Ava_3294 SM00889 Elongation factor G, domain IV Ava_3295 SM00028 Tetratricopeptide repeats Ava_3297 SM01004 Delta-aminolevulinic acid dehydratase Ava_3300 SM00360 RNA recognition motif Ava_3308 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3310 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3340 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_3340 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_3347 SM00382 ATPases associated with a variety of cellular activities Ava_3362 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_3362 SM00387 Histidine kinase-like ATPases Ava_3362 SM00388 His Kinase A (phosphoacceptor) domain Ava_3366 SM00419 helix_turn_helix, cAMP Regulatory protein Ava_3368 SM00387 Histidine kinase-like ATPases Ava_3368 SM00388 His Kinase A (phosphoacceptor) domain Ava_3369 SM00448 cheY-homologous receiver domain Ava_3369 SM00862 Transcriptional regulatory protein, C terminal Ava_3382 SM00331 Sigma factor PP2C-like phosphatases Ava_3382 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Ava_3384 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3392 SM00831 Cation transporter/ATPase, N-terminus Ava_3393 SM00460 Transglutaminase/protease-like homologues Ava_3402 SM00448 cheY-homologous receiver domain Ava_3407 SM00833 Cobalamin synthesis protein cobW C-terminal domain Ava_3410 SM00998 Adenylosuccinate lyase C-terminus Ava_3413 SM00028 Tetratricopeptide repeats Ava_3424 SM00562 Ava_3424 Ava_3430 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Ava_3430 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Ava_3436 SM00393 Putative single-stranded nucleic acids-binding domain Ava_3439 SM00849 Metallo-beta-lactamase superfamily Ava_3440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_3440 SM00245 tail specific protease Ava_3449 SM00062 Bacterial periplasmic substrate-binding proteins Ava_3450 SM00028 Tetratricopeptide repeats Ava_3452 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_3452 SM00387 Histidine kinase-like ATPases Ava_3452 SM00388 His Kinase A (phosphoacceptor) domain Ava_3453 SM00448 cheY-homologous receiver domain Ava_3453 SM00862 Transcriptional regulatory protein, C terminal Ava_3459 SM00822 Ava_3459 Ava_3462 SM00028 Tetratricopeptide repeats Ava_3464 SM00465 GIY-YIG type nucleases (URI domain) Ava_3467 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_3467 SM00091 PAS domain Ava_3467 SM00387 Histidine kinase-like ATPases Ava_3467 SM00388 His Kinase A (phosphoacceptor) domain Ava_3467 SM00448 cheY-homologous receiver domain Ava_3471 SM00421 helix_turn_helix, Lux Regulon Ava_3473 SM00028 Tetratricopeptide repeats Ava_3483 SM00028 Tetratricopeptide repeats Ava_3502 SM00487 DEAD-like helicases superfamily Ava_3503 SM00382 ATPases associated with a variety of cellular activities Ava_3507 SM00028 Tetratricopeptide repeats Ava_3508 SM00185 Armadillo/beta-catenin-like repeats Ava_3508 SM00567 E-Z type HEAT repeats Ava_3512 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Ava_3516 SM00859 Semialdehyde dehydrogenase, NAD binding domain Ava_3517 SM01192 Ava_3517 Ava_3517 SM01193 Ava_3517 Ava_3526 SM00387 Histidine kinase-like ATPases Ava_3535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3535 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3535 SM00387 Histidine kinase-like ATPases Ava_3536 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_3539 SM01228 Ava_3539 Ava_3541 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_3541 SM00091 PAS domain Ava_3541 SM00387 Histidine kinase-like ATPases Ava_3542 SM00091 PAS domain Ava_3557 SM00831 Cation transporter/ATPase, N-terminus Ava_3561 SM00836 DALR anticodon binding domain Ava_3561 SM01016 Arginyl tRNA synthetase N terminal dom Ava_3565 SM00831 Cation transporter/ATPase, N-terminus Ava_3584 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3588 SM00382 ATPases associated with a variety of cellular activities Ava_3596 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3596 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3596 SM00387 Histidine kinase-like ATPases Ava_3603 SM00382 ATPases associated with a variety of cellular activities Ava_3603 SM00994 ClpX C4-type zinc finger Ava_3603 SM01086 C-terminal, D2-small domain, of ClpB protein Ava_3606 SM00859 Semialdehyde dehydrogenase, NAD binding domain Ava_3607 SM01130 Ava_3607 Ava_3608 SM00849 Metallo-beta-lactamase superfamily Ava_3616 SM00387 Histidine kinase-like ATPases Ava_3616 SM00388 His Kinase A (phosphoacceptor) domain Ava_3616 SM00448 cheY-homologous receiver domain Ava_3627 SM00883 Chaperonin 10 Kd subunit Ava_3628 SM00421 helix_turn_helix, Lux Regulon Ava_3628 SM00448 cheY-homologous receiver domain Ava_3638 SM00382 ATPases associated with a variety of cellular activities Ava_3643 SM00237 Domains in Na-Ca exchangers and integrin-beta4 Ava_3645 SM00861 Transketolase, pyrimidine binding domain Ava_3646 SM00825 Beta-ketoacyl synthase Ava_3651 SM00855 Phosphoglycerate mutase family Ava_3655 SM00382 ATPases associated with a variety of cellular activities Ava_3658 SM00487 DEAD-like helicases superfamily Ava_3658 SM00490 helicase superfamily c-terminal domain Ava_3661 SM01248 Ava_3661 Ava_3668 SM01266 Ava_3668 Ava_3669 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_3669 SM00091 PAS domain Ava_3669 SM00267 diguanylate cyclase Ava_3669 SM00448 cheY-homologous receiver domain Ava_3686 SM00842 Cell division protein FtsA Ava_3689 SM00965 Secretin and TonB N terminus short domain Ava_3692 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_3702 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_3704 SM00382 ATPases associated with a variety of cellular activities Ava_3712 SM00226 Low molecular weight phosphatase family Ava_3715 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ava_3717 SM00833 Cobalamin synthesis protein cobW C-terminal domain Ava_3718 SM00840 Ava_3718 Ava_3721 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3721 SM00387 Histidine kinase-like ATPases Ava_3723 SM00331 Sigma factor PP2C-like phosphatases Ava_3723 SM00448 cheY-homologous receiver domain Ava_3729 SM00028 Tetratricopeptide repeats Ava_3732 SM00316 Ribosomal protein S1-like RNA-binding domain Ava_3734 SM00345 helix_turn_helix gluconate operon transcriptional repressor Ava_3735 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Ava_3735 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3735 SM00091 PAS domain Ava_3737 SM00912 haemagglutination activity domain Ava_3764 SM00822 Ava_3764 Ava_3771 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3771 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_3771 SM00091 PAS domain Ava_3771 SM00387 Histidine kinase-like ATPases Ava_3771 SM00388 His Kinase A (phosphoacceptor) domain Ava_3771 SM00448 cheY-homologous receiver domain Ava_3775 SM00448 cheY-homologous receiver domain Ava_3776 SM00448 cheY-homologous receiver domain Ava_3777 SM00260 Two component signalling adaptor domain Ava_3778 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3778 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Ava_3779 SM00073 Histidine Phosphotransfer domain Ava_3779 SM00260 Two component signalling adaptor domain Ava_3779 SM00387 Histidine kinase-like ATPases Ava_3779 SM00448 cheY-homologous receiver domain Ava_3779 SM01231 Ava_3779 Ava_3780 SM00226 Low molecular weight phosphatase family Ava_3784 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Ava_3784 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Ava_3784 SM00493 Ava_3784 Ava_3790 SM00400 zinc finger Ava_3790 SM00493 Ava_3790 Ava_3791 SM00646 Ava_3791 Ava_3804 SM00732 Likely ribonuclease with RNase H fold. Ava_3807 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Ava_3816 SM00255 Toll - interleukin 1 - resistance Ava_3818 SM00798 AICARFT/IMPCHase bienzyme Ava_3818 SM00851 MGS-like domain Ava_3819 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_3819 SM00091 PAS domain Ava_3819 SM00387 Histidine kinase-like ATPases Ava_3819 SM00388 His Kinase A (phosphoacceptor) domain Ava_3819 SM00448 cheY-homologous receiver domain Ava_3828 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_3850 SM00387 Histidine kinase-like ATPases Ava_3850 SM00388 His Kinase A (phosphoacceptor) domain Ava_3851 SM00421 helix_turn_helix, Lux Regulon Ava_3851 SM00448 cheY-homologous receiver domain Ava_3852 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3852 SM00387 Histidine kinase-like ATPases Ava_3852 SM00388 His Kinase A (phosphoacceptor) domain Ava_3853 SM00448 cheY-homologous receiver domain Ava_3854 SM00387 Histidine kinase-like ATPases Ava_3854 SM00388 His Kinase A (phosphoacceptor) domain Ava_3854 SM00448 cheY-homologous receiver domain Ava_3862 SM00422 helix_turn_helix, mercury resistance Ava_3865 SM00387 Histidine kinase-like ATPases Ava_3865 SM00388 His Kinase A (phosphoacceptor) domain Ava_3867 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3867 SM00320 WD40 repeats Ava_3868 SM00052 Putative diguanylate phosphodiesterase Ava_3868 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_3868 SM00091 PAS domain Ava_3868 SM00267 diguanylate cyclase Ava_3869 SM00342 helix_turn_helix, arabinose operon control protein Ava_3878 SM01080 Ava_3878 Ava_3886 SM00062 Bacterial periplasmic substrate-binding proteins Ava_3886 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Ava_3891 SM00028 Tetratricopeptide repeats Ava_3894 SM01152 Ava_3894 Ava_3903 SM00961 Ribulose bisphosphate carboxylase, small chain Ava_3905 SM00961 Ribulose bisphosphate carboxylase, small chain Ava_3941 SM00899 Ava_3941 Ava_3943 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_3943 SM01093 Ava_3943 Ava_3944 SM00248 ankyrin repeats Ava_3952 SM00845 GatB domain Ava_3963 SM00996 S-adenosyl-L-homocysteine hydrolase Ava_3963 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Ava_3971 SM00530 Helix-turn-helix XRE-family like proteins Ava_3975 SM00387 Histidine kinase-like ATPases Ava_3975 SM00388 His Kinase A (phosphoacceptor) domain Ava_3975 SM00448 cheY-homologous receiver domain Ava_3976 SM00387 Histidine kinase-like ATPases Ava_3976 SM00448 cheY-homologous receiver domain Ava_3985 SM00822 Ava_3985 Ava_3985 SM00823 Phosphopantetheine attachment site Ava_3985 SM00825 Beta-ketoacyl synthase Ava_3985 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_3985 SM01294 Ava_3985 Ava_3986 SM00822 Ava_3986 Ava_3986 SM00823 Phosphopantetheine attachment site Ava_3986 SM00825 Beta-ketoacyl synthase Ava_3986 SM00826 Ava_3986 Ava_3986 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_3986 SM01294 Ava_3986 Ava_3987 SM00823 Phosphopantetheine attachment site Ava_3987 SM01294 Ava_3987 Ava_3995 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_3995 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_3995 SM00387 Histidine kinase-like ATPases Ava_3995 SM00388 His Kinase A (phosphoacceptor) domain Ava_4000 SM00477 DNA/RNA non-specific endonuclease Ava_4000 SM00892 DNA/RNA non-specific endonuclease Ava_4022 SM00028 Tetratricopeptide repeats Ava_4036 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Ava_4038 SM00382 ATPases associated with a variety of cellular activities Ava_4042 SM00530 Helix-turn-helix XRE-family like proteins Ava_4055 SM00530 Helix-turn-helix XRE-family like proteins Ava_4066 SM00062 Bacterial periplasmic substrate-binding proteins Ava_4073 SM00185 Armadillo/beta-catenin-like repeats Ava_4073 SM00567 E-Z type HEAT repeats Ava_4079 SM00450 Rhodanese Homology Domain Ava_4083 SM00831 Cation transporter/ATPase, N-terminus Ava_4085 SM00448 cheY-homologous receiver domain Ava_4085 SM00862 Transcriptional regulatory protein, C terminal Ava_4086 SM00387 Histidine kinase-like ATPases Ava_4086 SM00388 His Kinase A (phosphoacceptor) domain Ava_4087 SM00831 Cation transporter/ATPase, N-terminus Ava_4090 SM00357 Cold shock protein domain Ava_4096 SM00421 helix_turn_helix, Lux Regulon Ava_4096 SM00448 cheY-homologous receiver domain Ava_4099 SM00823 Phosphopantetheine attachment site Ava_4101 SM00823 Phosphopantetheine attachment site Ava_4101 SM00824 Thioesterase Ava_4105 SM00382 ATPases associated with a variety of cellular activities Ava_4108 SM00823 Phosphopantetheine attachment site Ava_4108 SM00825 Beta-ketoacyl synthase Ava_4108 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_4109 SM00823 Phosphopantetheine attachment site Ava_4109 SM01294 Ava_4109 Ava_4115 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ava_4123 SM01400 Ava_4123 Ava_4131 SM00912 haemagglutination activity domain Ava_4135 SM00387 Histidine kinase-like ATPases Ava_4135 SM00388 His Kinase A (phosphoacceptor) domain Ava_4135 SM00448 cheY-homologous receiver domain Ava_4135 SM01080 Ava_4135 Ava_4136 SM00387 Histidine kinase-like ATPases Ava_4136 SM00448 cheY-homologous receiver domain Ava_4137 SM00028 Tetratricopeptide repeats Ava_4138 SM00382 ATPases associated with a variety of cellular activities Ava_4146 SM00062 Bacterial periplasmic substrate-binding proteins Ava_4147 SM00382 ATPases associated with a variety of cellular activities Ava_4149 SM00267 diguanylate cyclase Ava_4149 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_4151 SM00382 ATPases associated with a variety of cellular activities Ava_4154 SM00062 Bacterial periplasmic substrate-binding proteins Ava_4156 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_4165 SM00487 DEAD-like helicases superfamily Ava_4181 SM00912 haemagglutination activity domain Ava_4183 SM00028 Tetratricopeptide repeats Ava_4184 SM00255 Toll - interleukin 1 - resistance Ava_4184 SM01080 Ava_4184 Ava_4208 SM00663 RNA polymerase I subunit A N-terminus Ava_4216 SM00240 Forkhead associated domain Ava_4222 SM01234 Ava_4222 Ava_4225 SM00382 ATPases associated with a variety of cellular activities Ava_4228 SM00710 Parallel beta-helix repeats Ava_4230 SM00382 ATPases associated with a variety of cellular activities Ava_4237 SM00422 helix_turn_helix, mercury resistance Ava_4260 SM00530 Helix-turn-helix XRE-family like proteins Ava_4264 SM00861 Transketolase, pyrimidine binding domain Ava_4266 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Ava_4267 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4267 SM00387 Histidine kinase-like ATPases Ava_4267 SM00388 His Kinase A (phosphoacceptor) domain Ava_4273 SM00959 Rho termination factor, N-terminal domain Ava_4293 SM00448 cheY-homologous receiver domain Ava_4295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Ava_4295 SM00465 GIY-YIG type nucleases (URI domain) Ava_4303 SM00363 S4 RNA-binding domain Ava_4303 SM01390 Ava_4303 Ava_4305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_4305 SM00387 Histidine kinase-like ATPases Ava_4305 SM00388 His Kinase A (phosphoacceptor) domain Ava_4314 SM00248 ankyrin repeats Ava_4323 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_4325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4325 SM00091 PAS domain Ava_4325 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_4325 SM00387 Histidine kinase-like ATPases Ava_4326 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4326 SM00091 PAS domain Ava_4326 SM00387 Histidine kinase-like ATPases Ava_4326 SM00388 His Kinase A (phosphoacceptor) domain Ava_4326 SM00448 cheY-homologous receiver domain Ava_4342 SM00382 ATPases associated with a variety of cellular activities Ava_4343 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4343 SM00091 PAS domain Ava_4343 SM00387 Histidine kinase-like ATPases Ava_4343 SM00388 His Kinase A (phosphoacceptor) domain Ava_4343 SM00448 cheY-homologous receiver domain Ava_4344 SM00448 cheY-homologous receiver domain Ava_4345 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4345 SM00091 PAS domain Ava_4345 SM00387 Histidine kinase-like ATPases Ava_4345 SM00388 His Kinase A (phosphoacceptor) domain Ava_4347 SM00448 cheY-homologous receiver domain Ava_4347 SM00862 Transcriptional regulatory protein, C terminal Ava_4348 SM00382 ATPases associated with a variety of cellular activities Ava_4348 SM01086 C-terminal, D2-small domain, of ClpB protein Ava_4358 SM00382 ATPases associated with a variety of cellular activities Ava_4358 SM00962 SRP54-type protein, GTPase domain Ava_4358 SM00963 SRP54-type protein, helical bundle domain Ava_4365 SM00382 ATPases associated with a variety of cellular activities Ava_4366 SM01011 Aminopeptidase P, N-terminal domain Ava_4383 SM00382 ATPases associated with a variety of cellular activities Ava_4389 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_4389 SM00876 Biotin and Thiamin Synthesis associated domain Ava_4391 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4393 SM00729 Elongator protein 3, MiaB family, Radical SAM Ava_4396 SM00646 Ava_4396 Ava_4401 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4401 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4401 SM00091 PAS domain Ava_4401 SM00387 Histidine kinase-like ATPases Ava_4410 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Ava_4412 SM00535 Ribonuclease III family Ava_4413 SM00967 RNA 2'-O ribose methyltransferase substrate binding Ava_4425 SM00052 Putative diguanylate phosphodiesterase Ava_4425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4425 SM00240 Forkhead associated domain Ava_4425 SM00267 diguanylate cyclase Ava_4427 SM00829 Enoylreductase Ava_4431 SM00448 cheY-homologous receiver domain Ava_4432 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4432 SM00091 PAS domain Ava_4432 SM00387 Histidine kinase-like ATPases Ava_4432 SM00388 His Kinase A (phosphoacceptor) domain Ava_4432 SM00448 cheY-homologous receiver domain Ava_4433 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4433 SM00387 Histidine kinase-like ATPases Ava_4433 SM00388 His Kinase A (phosphoacceptor) domain Ava_4437 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_4438 SM00382 ATPases associated with a variety of cellular activities Ava_4452 SM00872 Alpha mannosidase, middle domain Ava_4454 SM00563 Phosphate acyltransferases Ava_4457 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4457 SM00387 Histidine kinase-like ATPases Ava_4457 SM00388 His Kinase A (phosphoacceptor) domain Ava_4460 SM00507 HNH nucleases Ava_4464 SM00434 DNA Topoisomerase IV Ava_4467 SM00877 Ava_4467 Ava_4469 SM00961 Ribulose bisphosphate carboxylase, small chain Ava_4471 SM00877 Ava_4471 Ava_4472 SM00877 Ava_4472 Ava_4476 SM00567 E-Z type HEAT repeats Ava_4479 SM00642 Alpha-amylase domain Ava_4489 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4489 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4489 SM00387 Histidine kinase-like ATPases Ava_4489 SM00388 His Kinase A (phosphoacceptor) domain Ava_4492 SM00028 Tetratricopeptide repeats Ava_4503 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4503 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4503 SM00387 Histidine kinase-like ATPases Ava_4503 SM00388 His Kinase A (phosphoacceptor) domain Ava_4504 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4504 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4504 SM00387 Histidine kinase-like ATPases Ava_4504 SM00388 His Kinase A (phosphoacceptor) domain Ava_4507 SM00450 Rhodanese Homology Domain Ava_4510 SM01093 Ava_4510 Ava_4511 SM00363 S4 RNA-binding domain Ava_4512 SM00382 ATPases associated with a variety of cellular activities Ava_4513 SM00382 ATPases associated with a variety of cellular activities Ava_4518 SM00421 helix_turn_helix, Lux Regulon Ava_4518 SM00448 cheY-homologous receiver domain Ava_4520 SM01321 Ava_4520 Ava_4528 SM00860 SMI1 / KNR4 family Ava_4532 SM00861 Transketolase, pyrimidine binding domain Ava_4537 SM00567 E-Z type HEAT repeats Ava_4542 SM00382 ATPases associated with a variety of cellular activities Ava_4543 SM00382 ATPases associated with a variety of cellular activities Ava_4544 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Ava_4548 SM00567 E-Z type HEAT repeats Ava_4550 SM00100 Cyclic nucleotide-monophosphate binding domain Ava_4554 SM00028 Tetratricopeptide repeats Ava_4561 SM00507 HNH nucleases Ava_4572 SM00382 ATPases associated with a variety of cellular activities Ava_4589 SM00984 UDP binding domain Ava_4610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_4616 SM00642 Alpha-amylase domain Ava_4621 SM01236 Ava_4621 Ava_4631 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4631 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4631 SM00091 PAS domain Ava_4631 SM00387 Histidine kinase-like ATPases Ava_4631 SM00388 His Kinase A (phosphoacceptor) domain Ava_4631 SM00448 cheY-homologous receiver domain Ava_4634 SM00988 UreE urease accessory protein, N-terminal domain Ava_4641 SM00244 prohibitin homologues Ava_4642 SM00360 RNA recognition motif Ava_4645 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Ava_4645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4645 SM00240 Forkhead associated domain Ava_4651 SM01387 Ava_4651 Ava_4654 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ava_4657 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ava_4660 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_4660 SM01093 Ava_4660 Ava_4664 SM00881 CoA binding domain Ava_4670 SM00448 cheY-homologous receiver domain Ava_4673 SM00093 SERine Proteinase INhibitors Ava_4680 SM00487 DEAD-like helicases superfamily Ava_4680 SM00490 helicase superfamily c-terminal domain Ava_4681 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4682 SM00320 WD40 repeats Ava_4686 SM00054 EF-hand, calcium binding motif Ava_4689 SM00968 SMC proteins Flexible Hinge Domain Ava_4696 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4696 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_4696 SM00387 Histidine kinase-like ATPases Ava_4696 SM00388 His Kinase A (phosphoacceptor) domain Ava_4696 SM00448 cheY-homologous receiver domain Ava_4698 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Ava_4698 SM01080 Ava_4698 Ava_4701 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4701 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4701 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_4701 SM00387 Histidine kinase-like ATPases Ava_4701 SM00388 His Kinase A (phosphoacceptor) domain Ava_4701 SM00448 cheY-homologous receiver domain Ava_4702 SM00387 Histidine kinase-like ATPases Ava_4702 SM00388 His Kinase A (phosphoacceptor) domain Ava_4702 SM00448 cheY-homologous receiver domain Ava_4709 SM00877 Ava_4709 Ava_4710 SM00877 Ava_4710 Ava_4711 SM00930 Ava_4711 Ava_4716 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4716 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4716 SM00387 Histidine kinase-like ATPases Ava_4716 SM00388 His Kinase A (phosphoacceptor) domain Ava_4723 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4723 SM00387 Histidine kinase-like ATPases Ava_4723 SM00388 His Kinase A (phosphoacceptor) domain Ava_4725 SM00237 Domains in Na-Ca exchangers and integrin-beta4 Ava_4726 SM00237 Domains in Na-Ca exchangers and integrin-beta4 Ava_4733 SM00327 von Willebrand factor (vWF) type A domain Ava_4734 SM00530 Helix-turn-helix XRE-family like proteins Ava_4740 SM00091 PAS domain Ava_4740 SM00342 helix_turn_helix, arabinose operon control protein Ava_4741 SM00823 Phosphopantetheine attachment site Ava_4742 SM00825 Beta-ketoacyl synthase Ava_4742 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_4744 SM00822 Ava_4744 Ava_4744 SM00823 Phosphopantetheine attachment site Ava_4745 SM00825 Beta-ketoacyl synthase Ava_4745 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_4747 SM00825 Beta-ketoacyl synthase Ava_4747 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_4749 SM00822 Ava_4749 Ava_4750 SM00825 Beta-ketoacyl synthase Ava_4750 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_4753 SM00091 PAS domain Ava_4753 SM00387 Histidine kinase-like ATPases Ava_4753 SM00388 His Kinase A (phosphoacceptor) domain Ava_4753 SM00448 cheY-homologous receiver domain Ava_4762 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Ava_4764 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4764 SM01080 Ava_4764 Ava_4767 SM00382 ATPases associated with a variety of cellular activities Ava_4772 SM00046 Diacylglycerol kinase catalytic domain (presumed) Ava_4779 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Ava_4779 SM00387 Histidine kinase-like ATPases Ava_4779 SM00388 His Kinase A (phosphoacceptor) domain Ava_4779 SM00448 cheY-homologous receiver domain Ava_4781 SM00138 Methyltransferase, chemotaxis proteins Ava_4783 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4783 SM00091 PAS domain Ava_4783 SM00387 Histidine kinase-like ATPases Ava_4783 SM00388 His Kinase A (phosphoacceptor) domain Ava_4783 SM00448 cheY-homologous receiver domain Ava_4785 SM00116 Domain in cystathionine beta-synthase and other proteins. Ava_4803 SM00028 Tetratricopeptide repeats Ava_4807 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_4807 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4807 SM00091 PAS domain Ava_4807 SM00387 Histidine kinase-like ATPases Ava_4807 SM00388 His Kinase A (phosphoacceptor) domain Ava_4807 SM00448 cheY-homologous receiver domain Ava_4813 SM00320 WD40 repeats Ava_4824 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Ava_4825 SM00028 Tetratricopeptide repeats Ava_4829 SM00382 ATPases associated with a variety of cellular activities Ava_4831 SM01329 Ava_4831 Ava_4833 SM00823 Phosphopantetheine attachment site Ava_4834 SM00823 Phosphopantetheine attachment site Ava_4834 SM00825 Beta-ketoacyl synthase Ava_4834 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Ava_4837 SM00823 Phosphopantetheine attachment site Ava_4845 SM00710 Parallel beta-helix repeats Ava_4855 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4855 SM00320 WD40 repeats Ava_4857 SM00155 Phospholipase D. Active site motifs. Ava_4857 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Ava_4862 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4863 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4867 SM00567 E-Z type HEAT repeats Ava_4867 SM00860 SMI1 / KNR4 family Ava_4870 SM00966 SpoVT / AbrB like domain Ava_4880 SM00849 Metallo-beta-lactamase superfamily Ava_4885 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_4885 SM00091 PAS domain Ava_4885 SM00387 Histidine kinase-like ATPases Ava_4886 SM00650 Ribosomal RNA adenine dimethylases Ava_4889 SM00342 helix_turn_helix, arabinose operon control protein Ava_4889 SM00448 cheY-homologous receiver domain Ava_4894 SM00028 Tetratricopeptide repeats Ava_4896 SM00448 cheY-homologous receiver domain Ava_4898 SM00382 ATPases associated with a variety of cellular activities Ava_4900 SM00831 Cation transporter/ATPase, N-terminus Ava_4907 SM00363 S4 RNA-binding domain Ava_4911 SM00877 Ava_4911 Ava_4914 SM00448 cheY-homologous receiver domain Ava_4914 SM00862 Transcriptional regulatory protein, C terminal Ava_4923 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_4924 SM00240 Forkhead associated domain Ava_4925 SM00382 ATPases associated with a variety of cellular activities Ava_4928 SM00091 PAS domain Ava_4928 SM00387 Histidine kinase-like ATPases Ava_4928 SM00388 His Kinase A (phosphoacceptor) domain Ava_4928 SM00448 cheY-homologous receiver domain Ava_4939 SM00644 Ava_4939 Ava_4945 SM00382 ATPases associated with a variety of cellular activities Ava_4974 SM00028 Tetratricopeptide repeats Ava_4987 SM00382 ATPases associated with a variety of cellular activities Ava_4988 SM00028 Tetratricopeptide repeats Ava_4989 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Ava_4989 SM00954 Region found in RelA / SpoT proteins Ava_4993 SM00382 ATPases associated with a variety of cellular activities Ava_4995 SM00382 ATPases associated with a variety of cellular activities Ava_5002 SM00062 Bacterial periplasmic substrate-binding proteins Ava_5003 SM00062 Bacterial periplasmic substrate-binding proteins Ava_5012 SM00062 Bacterial periplasmic substrate-binding proteins Ava_5027 SM00014 Acid phosphatase homologues Ava_5029 SM00244 prohibitin homologues Ava_5032 SM00320 WD40 repeats Ava_5048 SM00710 Parallel beta-helix repeats Ava_5054 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_5068 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Ava_A0002 SM00331 Sigma factor PP2C-like phosphatases Ava_A0002 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Ava_A0004 SM00327 von Willebrand factor (vWF) type A domain Ava_A0006 SM00327 von Willebrand factor (vWF) type A domain Ava_A0021 SM00470 ParB-like nuclease domain Ava_A0025 SM00857 Resolvase, N terminal domain Ava_A0032 SM00028 Tetratricopeptide repeats Ava_A0032 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_B0002 SM00248 ankyrin repeats Ava_B0006 SM00912 haemagglutination activity domain Ava_B0007 SM00028 Tetratricopeptide repeats Ava_B0009 SM00028 Tetratricopeptide repeats Ava_B0009 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_B0014 SM00507 HNH nucleases Ava_B0028 SM00387 Histidine kinase-like ATPases Ava_B0029 SM00421 helix_turn_helix, Lux Regulon Ava_B0029 SM00448 cheY-homologous receiver domain Ava_B0036 SM00382 ATPases associated with a variety of cellular activities Ava_B0057 SM00507 HNH nucleases Ava_B0066 SM00382 ATPases associated with a variety of cellular activities Ava_B0069 SM00487 DEAD-like helicases superfamily Ava_B0069 SM00490 helicase superfamily c-terminal domain Ava_B0088 SM01252 Ava_B0088 Ava_B0095 SM00320 WD40 repeats Ava_B0101 SM01321 Ava_B0101 Ava_B0106 SM00831 Cation transporter/ATPase, N-terminus Ava_B0112 SM00382 ATPases associated with a variety of cellular activities Ava_B0113 SM00470 ParB-like nuclease domain Ava_B0132 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_B0132 SM00320 WD40 repeats Ava_B0134 SM00327 von Willebrand factor (vWF) type A domain Ava_B0147 SM00028 Tetratricopeptide repeats Ava_B0153 SM00382 ATPases associated with a variety of cellular activities Ava_B0163 SM00382 ATPases associated with a variety of cellular activities Ava_B0167 SM00899 Ava_B0167 Ava_B0168 SM00899 Ava_B0168 Ava_B0191 SM00387 Histidine kinase-like ATPases Ava_B0191 SM00388 His Kinase A (phosphoacceptor) domain Ava_B0191 SM00448 cheY-homologous receiver domain Ava_B0202 SM00220 Serine/Threonine protein kinases, catalytic domain Ava_B0208 SM00387 Histidine kinase-like ATPases Ava_B0208 SM00388 His Kinase A (phosphoacceptor) domain Ava_B0209 SM00421 helix_turn_helix, Lux Regulon Ava_B0209 SM00448 cheY-homologous receiver domain Ava_B0212 SM00382 ATPases associated with a variety of cellular activities Ava_B0213 SM00382 ATPases associated with a variety of cellular activities Ava_B0223 SM00382 ATPases associated with a variety of cellular activities Ava_B0225 SM01004 Delta-aminolevulinic acid dehydratase Ava_B0226 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Ava_B0228 SM00833 Cobalamin synthesis protein cobW C-terminal domain Ava_B0237 SM00382 ATPases associated with a variety of cellular activities Ava_B0238 SM01260 Ava_B0238 Ava_B0265 SM00773 Proposed nucleic acid binding domain Ava_B0267 SM00382 ATPases associated with a variety of cellular activities Ava_B0282 SM00487 DEAD-like helicases superfamily Ava_B0286 SM00479 Ava_B0286 Ava_B0290 SM00318 Staphylococcal nuclease homologues Ava_B0299 SM00028 Tetratricopeptide repeats Ava_B0307 SM00487 DEAD-like helicases superfamily Ava_B0307 SM00490 helicase superfamily c-terminal domain Ava_B0318 SM00530 Helix-turn-helix XRE-family like proteins Ava_B0336 SM00477 DNA/RNA non-specific endonuclease Ava_B0336 SM00892 DNA/RNA non-specific endonuclease Ava_C0002 SM00823 Phosphopantetheine attachment site Ava_C0002 SM00824 Thioesterase Ava_C0008 SM00823 Phosphopantetheine attachment site Ava_C0009 SM00823 Phosphopantetheine attachment site Ava_C0014 SM00382 ATPases associated with a variety of cellular activities Ava_C0015 SM00382 ATPases associated with a variety of cellular activities Ava_C0027 SM00342 helix_turn_helix, arabinose operon control protein Ava_C0030 SM00382 ATPases associated with a variety of cellular activities Ava_C0033 SM00507 HNH nucleases Ava_C0060 SM00487 DEAD-like helicases superfamily Ava_C0060 SM00490 helicase superfamily c-terminal domain Ava_C0075 SM00480 DNA polymerase III beta subunit Ava_C0076 SM00382 ATPases associated with a variety of cellular activities Ava_C0090 SM00411 bacterial (prokaryotic) histone like domain Ava_C0108 SM00829 Enoylreductase Ava_C0109 SM00822 Ava_C0109 Ava_C0115 SM00342 helix_turn_helix, arabinose operon control protein Ava_C0116 SM00421 helix_turn_helix, Lux Regulon Ava_C0116 SM00448 cheY-homologous receiver domain Ava_C0117 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_C0117 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Ava_C0117 SM00091 PAS domain Ava_C0117 SM00387 Histidine kinase-like ATPases Ava_C0122 SM00507 HNH nucleases Ava_C0123 SM00470 ParB-like nuclease domain Ava_C0126 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ava_C0127 SM01092 CO dehydrogenase flavoprotein C-terminal domain Ava_C0132 SM00382 ATPases associated with a variety of cellular activities Ava_C0132 SM01086 C-terminal, D2-small domain, of ClpB protein Ava_C0134 SM00271 DnaJ molecular chaperone homology domain Ava_C0139 SM00749 bacterial OsmY and nodulation domain Ava_C0145 SM00883 Chaperonin 10 Kd subunit Ava_C0152 SM01350 Ava_C0152 Ava_C0156 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Ava_C0156 SM00387 Histidine kinase-like ATPases Ava_C0156 SM00388 His Kinase A (phosphoacceptor) domain Ava_C0156 SM00448 cheY-homologous receiver domain Ava_C0162 SM00448 cheY-homologous receiver domain Ava_C0163 SM00448 cheY-homologous receiver domain Ava_C0163 SM00862 Transcriptional regulatory protein, C terminal Ava_C0192 SM00382 ATPases associated with a variety of cellular activities Ava_C0194 SM00421 helix_turn_helix, Lux Regulon Ava_C0194 SM00448 cheY-homologous receiver domain Ava_C0219 SM00490 helicase superfamily c-terminal domain Ava_C0224 SM00382 ATPases associated with a variety of cellular activities Ava_C0229 SM00530 Helix-turn-helix XRE-family like proteins Ava_C0233 SM00487 DEAD-like helicases superfamily Ava_C0233 SM00490 helicase superfamily c-terminal domain Ava_D0015 SM00411 bacterial (prokaryotic) histone like domain Ava_D0037 SM00530 Helix-turn-helix XRE-family like proteins