locus_tag old_locus_tag gene Name start end strand product note type ID NCBI 5S_rRNA 5S_rRNA 676717 676836 - 5S ribosomal RNA rRNA gene575 http://www.ncbi.nlm.nih.gov/gene/?term= 305818 305891 + tRNA-Ala tRNA Ala anticodon CGC%2C Cove score 74.59 tRNA rna12 http://www.ncbi.nlm.nih.gov/gene/?term= 9278 9351 + tRNA-Ile tRNA Ile anticodon GAT%2C Cove score 79.47 tRNA rna0 http://www.ncbi.nlm.nih.gov/gene/?term= 804530 804603 - tRNA-Thr tRNA Thr anticodon CGT%2C Cove score 74.72 tRNA rna45 http://www.ncbi.nlm.nih.gov/gene/?term= 412225 412295 - tRNA-Cys tRNA Cys anticodon GCA%2C Cove score 64.78 tRNA rna20 http://www.ncbi.nlm.nih.gov/gene/?term= 729455 729530 + tRNA-Phe tRNA Phe anticodon GAA%2C Cove score 74.74 tRNA rna42 http://www.ncbi.nlm.nih.gov/gene/?term= 598812 598883 - tRNA-Gln tRNA Gln anticodon CTG%2C Cove score 56.91 tRNA rna30 http://www.ncbi.nlm.nih.gov/gene/?term= 62170 62241 - tRNA-Thr tRNA Thr anticodon GGT%2C Cove score 73.84 tRNA rna3 http://www.ncbi.nlm.nih.gov/gene/?term= 552644 552717 - tRNA-Val tRNA Val anticodon TAC%2C Cove score 83.83 tRNA rna29 http://www.ncbi.nlm.nih.gov/gene/?term= 62810 62892 - tRNA-Tyr tRNA Tyr anticodon GTA%2C Cove score 64.70 tRNA rna4 http://www.ncbi.nlm.nih.gov/gene/?term= 193214 193289 - tRNA-Glu tRNA Glu anticodon TTC%2C Cove score 54.89 tRNA rna10 http://www.ncbi.nlm.nih.gov/gene/?term= 315950 316020 - tRNA-Gly tRNA Gly anticodon TCC%2C Cove score 77.64 tRNA rna13 http://www.ncbi.nlm.nih.gov/gene/?term= 412138 412209 - tRNA-Val tRNA Val anticodon GAC%2C Cove score 84.77 tRNA rna19 http://www.ncbi.nlm.nih.gov/gene/?term= 733163 733236 - tRNA-Met tRNA Met anticodon CAT%2C Cove score 82.07 tRNA rna43 http://www.ncbi.nlm.nih.gov/gene/?term= 729376 729449 + tRNA-Asp tRNA Asp anticodon GTC%2C Cove score 87.26 tRNA rna41 http://www.ncbi.nlm.nih.gov/gene/?term= 709583 709656 + tRNA-Asp tRNA Asp anticodon GTC%2C Cove score 87.26 tRNA rna37 http://www.ncbi.nlm.nih.gov/gene/?term= 520790 520861 - tRNA-Arg tRNA Arg anticodon CCT%2C Cove score 64.16 tRNA rna27 http://www.ncbi.nlm.nih.gov/gene/?term= 23S_rRNA 23S_rRNA 676889 679989 - 23S ribosomal RNA rRNA gene576 http://www.ncbi.nlm.nih.gov/gene/?term= 464292 464364 + tRNA-Thr tRNA Thr anticodon TGT%2C Cove score 83.11 tRNA rna23 http://www.ncbi.nlm.nih.gov/gene/?term= 521849 521921 - tRNA-Asn tRNA Asn anticodon GTT%2C Cove score 73.50 tRNA rna28 http://www.ncbi.nlm.nih.gov/gene/?term= 479104 479177 + tRNA-Met tRNA Met anticodon CAT%2C Cove score 85.31 tRNA rna24 http://www.ncbi.nlm.nih.gov/gene/?term= 335403 335478 + tRNA-Ala tRNA Ala anticodon GGC%2C Cove score 84.05 tRNA rna15 http://www.ncbi.nlm.nih.gov/gene/?term= 614058 614133 - tRNA-Lys tRNA Lys anticodon CTT%2C Cove score 73.89 tRNA rna31 http://www.ncbi.nlm.nih.gov/gene/?term= 729293 729366 + tRNA-Glu tRNA Glu anticodon TTC%2C Cove score 37.59 tRNA rna40 http://www.ncbi.nlm.nih.gov/gene/?term= 456763 456838 - tRNA-Arg tRNA Arg anticodon CCG%2C Cove score 73.51 tRNA rna22 http://www.ncbi.nlm.nih.gov/gene/?term= 396563 396635 - tRNA-Arg tRNA Arg anticodon TCT%2C Cove score 75.85 tRNA rna16 http://www.ncbi.nlm.nih.gov/gene/?term= 888014 888097 - tRNA-Leu tRNA Leu anticodon CAG%2C Cove score 64.33 tRNA rna52 http://www.ncbi.nlm.nih.gov/gene/?term= 16S_rRNA 16S_rRNA 680284 681809 - 16S ribosomal RNA rRNA gene577 http://www.ncbi.nlm.nih.gov/gene/?term= 839328 839400 + tRNA-Arg tRNA Arg anticodon ACG%2C Cove score 76.90 tRNA rna50 http://www.ncbi.nlm.nih.gov/gene/?term= ssrA ssrA 616144 616510 - gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term= 106618 106694 - tRNA-Pro tRNA Pro anticodon GGG%2C Cove score 78.34 tRNA rna5 http://www.ncbi.nlm.nih.gov/gene/?term= 316230 316303 + tRNA-Pro tRNA Pro anticodon TGG%2C Cove score 86.69 tRNA rna14 http://www.ncbi.nlm.nih.gov/gene/?term= 282872 282944 + tRNA-Glu tRNA Glu anticodon CTC%2C Cove score 56.40 tRNA rna11 http://www.ncbi.nlm.nih.gov/gene/?term= 193050 193125 - tRNA-Phe tRNA Phe anticodon GAA%2C Cove score 74.74 tRNA rna8 http://www.ncbi.nlm.nih.gov/gene/?term= 772144 772216 - tRNA-Lys tRNA Lys anticodon TTT%2C Cove score 82.30 tRNA rna44 http://www.ncbi.nlm.nih.gov/gene/?term= 818979 819052 + tRNA-Pro tRNA Pro anticodon CGG%2C Cove score 81.45 tRNA rna46 http://www.ncbi.nlm.nih.gov/gene/?term= 397480 397552 + tRNA-His tRNA His anticodon GTG%2C Cove score 79.87 tRNA rna17 http://www.ncbi.nlm.nih.gov/gene/?term= 839215 839303 + tRNA-Ser tRNA Ser anticodon GCT%2C Cove score 56.59 tRNA rna49 http://www.ncbi.nlm.nih.gov/gene/?term= 709662 709737 + tRNA-Phe tRNA Phe anticodon GAA%2C Cove score 74.74 tRNA rna38 http://www.ncbi.nlm.nih.gov/gene/?term= 9365 9441 + tRNA-Ala tRNA Ala anticodon TGC%2C Cove score 94.27 tRNA rna1 http://www.ncbi.nlm.nih.gov/gene/?term= 827040 827112 - tRNA-Trp tRNA Trp anticodon CCA%2C Cove score 80.91 tRNA rna47 http://www.ncbi.nlm.nih.gov/gene/?term= 886799 886883 + tRNA-Ser tRNA Ser anticodon GGA%2C Cove score 60.29 tRNA rna51 http://www.ncbi.nlm.nih.gov/gene/?term= 495533 495619 - tRNA-Leu tRNA Leu anticodon GAG%2C Cove score 55.44 tRNA rna25 http://www.ncbi.nlm.nih.gov/gene/?term= 725183 725263 + tRNA-Leu tRNA Leu anticodon TAG%2C Cove score 60.57 tRNA rna39 http://www.ncbi.nlm.nih.gov/gene/?term= 193131 193204 - tRNA-Asp tRNA Asp anticodon GTC%2C Cove score 87.26 tRNA rna9 http://www.ncbi.nlm.nih.gov/gene/?term= 519126 519211 + tRNA-Leu tRNA Leu anticodon CAA%2C Cove score 62.38 tRNA rna26 http://www.ncbi.nlm.nih.gov/gene/?term= 62075 62151 - tRNA-Met tRNA Met anticodon CAT%2C Cove score 95.55 tRNA rna2 http://www.ncbi.nlm.nih.gov/gene/?term= 412340 412411 - tRNA-Gly tRNA Gly anticodon GCC%2C Cove score 81.94 tRNA rna21 http://www.ncbi.nlm.nih.gov/gene/?term= 187804 187874 - tRNA-Gln tRNA Gln anticodon TTG%2C Cove score 59.16 tRNA rna7 http://www.ncbi.nlm.nih.gov/gene/?term= 130466 130552 + tRNA-Ser tRNA Ser anticodon CGA%2C Cove score 52.75 tRNA rna6 http://www.ncbi.nlm.nih.gov/gene/?term= 837870 837954 + tRNA-Ser tRNA Ser anticodon TGA%2C Cove score 57.77 tRNA rna48 http://www.ncbi.nlm.nih.gov/gene/?term= 896275 896348 - tRNA-Leu tRNA Leu anticodon TAA%2C Cove score 55.22 tRNA rna53 http://www.ncbi.nlm.nih.gov/gene/?term= 903296 903369 + tRNA-Gly tRNA Gly anticodon CCC%2C Cove score 72.23 tRNA rna54 http://www.ncbi.nlm.nih.gov/gene/?term= 709498 709573 + tRNA-Glu tRNA Glu anticodon TTC%2C Cove score 54.89 tRNA rna36 http://www.ncbi.nlm.nih.gov/gene/?term= 412019 412090 - tRNA-Val tRNA Val anticodon CAC%2C Cove score 84.28 tRNA rna18 http://www.ncbi.nlm.nih.gov/gene/?term= TW001 TW001 dnaA dnaA 1 1437 + chromosomal replication initiator protein DnaA Similar to Streptomyces coelicolor chromosomal replication initiator protein DnaA or SCO3879 or SCH18.16c SWALL:DNAA_STRCO (SWALL:P27902) (656 aa) fasta scores: E(): 3.8e-67%2C 53.02%25 id in 347 aa%2C and to Micrococcus luteus chromosomal replication initiator protein DnaA SWALL:DNAA_MICLU (SWALL:P21173) (515 aa) fasta scores: E(): 1.1e-64%2C 42.17%25 id in 505 aa gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=TW001 TW002 TW002 dnaN dnaN 1767 2900 + DNA polymerase III%2C beta chain Similar to Streptomyces coelicolor DNA polymerase III%2C beta chain DnaN or SCO3878 or SCH18.15c SWALL:DP3B_STRCO (SWALL:P27903) (376 aa) fasta scores: E(): 7.5e-42%2C 35.46%25 id in 375 aa gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=TW002 TW003 TW003 recF recF 2890 3981 + DNA replication and repair protein recF Similar to Streptomyces coelicolor DNA replication and repair protein RecF or SCO3876 or SCH18.13c SWALL:RECF_STRCO (SWALL:P36176) (373 aa) fasta scores: E(): 3.9e-24%2C 37.16%25 id in 374 aa gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=TW003 TW004 TW004 TW004 4011 4445 + hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO3875 or SCH18.12c SWALL:Y2H5_STRCO (SWALL:P35925) (190 aa) fasta scores: E(): 5.9%2C 24.32%25 id in 111 aa gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=TW004 TW005 TW005 gyrB1 gyrB1 4485 6434 + DNA gyrase subunit B Similar to Bacillus halodurans DNA gyrase subunit B GtrB or BH0006 SWALL:GYRB_BACHD (SWALL:O50627) (637 aa) fasta scores: E(): 1.1e-136%2C 56.74%25 id in 645 aa gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=TW005 TW006 TW006 gyrA1 gyrA1 6438 8897 + DNA gyrase subunit A Similar to Streptomyces coelicolor DNA gyrase subunit A GyrA or SCO3873 or SCH18.10c SWALL:GYRA_STRCO (SWALL:P35885) (857 aa) fasta scores: E(): 1.8e-189%2C 61.26%25 id in 808 aa gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=TW006 TW007 TW007 TW007 8894 9274 + putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO3872 or SCH18.09c SWALL:Q9KXX6 (EMBL:AL357152) (185 aa) fasta scores: E(): 0.0026%2C 30.5%25 id in 118 aa gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=TW007 TW008 TW008 TW008 9640 10332 - conserved hypothetical protein Similar to Thermoanaerobacter tengcongensis thiamine pyrophosphokinase Thi80 or Tte1497 SWALL:Q8R9T9 (EMBL:AE013107) (211 aa) fasta scores: E(): 2.5e-09%2C 29.68%25 id in 192 aa%2C and to Bacillus subtilis YloS protein SWALL:O34664 (EMBL:Z99112) (214 aa) fasta scores: E(): 5.7e-08%2C 30%25 id in 210 aa gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=TW008 TW009 TW009 TW009 10472 11095 + putative integral membrane protein Similar to Streptomyces coelicolor putative membrane protein SCO3855 or SCH69.25c SWALL:Q9XA09 (EMBL:AL079308) (297 aa) fasta scores: E(): 9.4e-13%2C 40%25 id in 155 aa gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=TW009 TW010 TW010 TW010 11133 11342 - putative membrane protein Similar to Streptomyces coelicolor hypothetical protein SCO3854 or SCH69.24 SWALL:Q9XA10 (EMBL:AL079308) (84 aa) fasta scores: E(): 1.4e-08%2C 40%25 id in 55 aa%2C and to Corynebacterium glutamicum hypothetical membrane protein Cgl0040 cgl0040 SWALL:BAB97433 (EMBL:AP005274) (90 aa) fasta scores: E(): 6.5e-06%2C 33.33%25 id in 63 aa gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=TW010 TW011 TW011 TW011 11399 12037 + putative glutamine amidotransferase Similar to Streptomyces coelicolor putative glutamine amidotransferase SCO3851 or SCH69.21c SWALL:Q9XA13 (EMBL:AL079308) (212 aa) fasta scores: E(): 1.8e-29%2C 43.68%25 id in 206 aa%2C and to Escherichia coli para-aminobenzoate synthase glutamine amidotransferase component II PabA or b3360 SWALL:PABA_ECOLI (SWALL:P00903) (187 aa) fasta scores: E(): 5e-24%2C 41.48%25 id in 188 aa gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=TW011 TW012 TW012 TW012 12143 12715 + conserved hypothetical membrane protein Similar to Rhizobium meliloti hypothetical transmembrane protein SMC00853 or R00853 SWALL:Q92RL3 (EMBL:AL591785) (182 aa) fasta scores: E(): 6.7e-26%2C 49.18%25 id in 183 aa gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=TW012 TW013 TW013 TW013 12752 13627 + putative integral membrane heat shock protease Similar to Streptococcus gordonii Challis probable protease HtpX homolog SWALL:HTPX_STRGC (SWALL:O30795) (297 aa) fasta scores: E(): 1.5e-41%2C 42.52%25 id in 301 aa%2C and to Escherichia coli probable protease HtpX or b1829 SWALL:HTPX_ECOLI (SWALL:P23894) (293 aa) fasta scores: E(): 4.9e-17%2C 32.05%25 id in 287 aa gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=TW013 TW014 TW014 TW014 13628 13999 + putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO1562 or SCL11.18 SWALL:Q9L1C0 (EMBL:AL157953) (138 aa) fasta scores: E(): 1.2e-12%2C 41.02%25 id in 117 aa gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=TW014 TW015 TW015 TW015 14121 15404 + WiSP family protein No significant database matches gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=TW015 TW016 TW016 dkgA dkgA 15432 16280 + 2%2C5-diketo-D-gluconic acid reductase A Similar to Yersinia pestis 2%2C5-diketo-D-gluconic acid reductase A DkgA or YPO0676 or y3501 SWALL:DKGA_YERPE (SWALL:Q8ZI40) (277 aa) fasta scores: E(): 5.3e-50%2C 46.71%25 id in 274 aa%2C and to Corynebacterium sp. 2%2C5-diketo-D-gluconic acid reductase A DkgA SWALL:DKGA_CORSP (SWALL:P06632) (277 aa) fasta scores: E(): 1.1e-55%2C 51.5%25 id in 266 aa gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=TW016 TW017 TW017 TW017 16396 18048 - putative phosphomannomutase Similar to Streptomyces coelicolor putative phosphomannomutase SCO4916 or SCK13.08c SWALL:Q9AD82 (EMBL:AL512667) (549 aa) fasta scores: E(): 9.1e-77%2C 44.21%25 id in 536 aa%2C and to Streptococcus thermophilus phosphoglucomutase PgmA SWALL:Q9K560 (EMBL:AJ243290) (572 aa) fasta scores: E(): 1.1e-28%2C 33.27%25 id in 544 aa gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=TW017 TW018 TW018 punA punA 18061 18894 - purine nucleoside phosphorylase Similar to Cellulomonas sp purine nucleoside phosphorylase PunA SWALL:PUNA_CELSP (SWALL:P81989) (282 aa) fasta scores: E(): 6.6e-45%2C 48.33%25 id in 271 aa gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=TW018 TW019 TW019 TW019 18975 20372 + putative oxidoreductase Similar to Corynebacterium glutamicum dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes cgl0688 SWALL:BAB98081 (EMBL:AP005276) (469 aa) fasta scores: E(): 6.5e-76%2C 48.58%25 id in 459 aa%2C and to Bacillus subtilis dihydrolipoamide dehydrogenase PdhD or AceD or CitL SWALL:DLD1_BACSU (SWALL:P21880) (470 aa) fasta scores: E(): 1.6e-35%2C 30.99%25 id in 442 aa gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=TW019 TW020 TW020 TW020 20441 22216 - putative acyl-CoA carboxylase complex A subunit Similar to Streptomyces coelicolor putative acyl-CoA carboxylase complex A subunit AccA1 SWALL:Q9RGQ6 (EMBL:AF113603) (590 aa) fasta scores: E(): 2.3e-110%2C 51.67%25 id in 596 aa%2C and to Mus musculus pyruvate carboxylase%2C mitochondrial precursor SWALL:PYC_MOUSE (SWALL:Q05920) (1178 aa) fasta scores: E(): 1.6e-71%2C 42.26%25 id in 504 aa gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=TW020 TW021 TW021 TW021 22333 22752 - hypothetical protein No significant database matches gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=TW021 TW022 TW022 TW022 22844 23152 + hypothetical protein No significant database matches gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=TW022 TW023 TW023 TW023 23168 23563 + putative integral membrane protein No significant database matches gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=TW023 TW024 TW024 TW024 23661 23798 + putative integral membrane protein Doubtful CDS. No significant database matches gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=TW024 TW025 TW025 pccB pccB 24099 25676 - propionyl-CoA carboxylase beta chain Similar to Saccharopolyspora erythraea propionyl-CoA carboxylase beta chain PccB SWALL:PCCB_SACER (SWALL:P53003) (546 aa) fasta scores: E(): 8.9e-123%2C 62.5%25 id in 520 aa gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=TW025 TW026 TW026 TW026 25738 26484 + putative protein ligase Similar to Mycobacterium tuberculosis BirA or Rv3279c or mtcy71.19c or mt3379 SWALL:P96884 (EMBL:Z92771) (266 aa) fasta scores: E(): 2.8e-16%2C 36.11%25 id in 252 aa%2C and to Bacillus subtilis BirA bifunctional protein [includes: biotin operon repressor%3B biotin--[acetyl-coa-carboxylase] synthetase BirA SWALL:BIRA_BACSU (SWALL:P42975) (325 aa) fasta scores: E(): 1.6e-11%2C 30.4%25 id in 250 aa gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=TW026 TW027 TW027 TW027 26537 26869 - putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO4845 or SC5G8.13 SWALL:Q9KZA1 (EMBL:AL353872) (157 aa) fasta scores: E(): 2.9e-08%2C 41.3%25 id in 92 aa gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=TW027 TW028 TW028 purK purK 26979 28232 + phosphoribosylaminoimidazole carboxylase ATPase subunit PurK Similar to Mycobacterium tuberculosis phosphoribosylaminoimidazole carboxylase ATPase subunit PurK or Rv3276c or mt3376 or mtcy71.16C SWALL:PURK_MYCTU (SWALL:P96881) (429 aa) fasta scores: E(): 1.3e-21%2C 39.43%25 id in 421 aa%2C and to Schizosaccharomyces pombe phosphoribosylaminoimidazole carboxylase Ade6 or Min1 or Spcc1322.13 SWALL:PUR6_SCHPO (SWALL:P15567) (552 aa) fasta scores: E(): 1.5e-14%2C 32.15%25 id in 395 aa gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=TW028 TW029 TW029 purE purE 28311 28853 + phosphoribosylaminoimidazole carboxylase catalytic subunit PurE Similar to Corynebacterium ammoniagenes phosphoribosylaminoimidazole carboxylase catalytic subunit PurE SWALL:PUR6_CORAM (SWALL:Q44679) (177 aa) fasta scores: E(): 7.7e-28%2C 55.09%25 id in 167 aa%2C and to Streptomyces coelicolor phosphoribosylaminoimidazole carboxylase catalytic subunit PurE or SCO3059 or SCBAC19G2.14c SWALL:Q93J44 (EMBL:AL596138) (180 aa) fasta scores: E(): 3.7e-27%2C 54.21%25 id in 166 aa gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=TW029 TW030 TW030 TW030 29078 29476 - putative integral membrane protein No significant database matches gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=TW030 TW032 TW032 TW032 29804 30667 - putative polysaccharide biosynthesis protein Similar to Streptomyces rishiriensis dTDP-4-keto-6-deoxyhexose reductase CouS SWALL:Q9F8T1 (EMBL:AF235050) (288 aa) fasta scores: E(): 4.4e-46%2C 48.52%25 id in 272 aa%2C and to Saccharopolyspora spinosa dTDP-4-dehydrorhamnose reductase Kre SWALL:Q93EJ9 (EMBL:AF355468) (305 aa) fasta scores: E(): 4.2e-36%2C 43.34%25 id in 293 aa gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=TW032 TW033 TW033 TW033 30664 31647 - putative dehydratase Similar to Streptomyces tenebrarius AprE SWALL:Q9F5R6 (EMBL:AF306787) (332 aa) fasta scores: E(): 8.2e-88%2C 64.83%25 id in 327 aa gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=TW033 TW035 TW035 TW035 31892 32515 + putative epimerase Similar to Streptomyces antibioticus dTDP-4-keto-6-deoxyglucose 3%2C5-epimerase SWALL:Q9L6C5 (EMBL:AF237894) (202 aa) fasta scores: E(): 4e-34%2C 50%25 id in 192 aa gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=TW035 TW036 TW036 TW036 32571 33449 + putative nucleotidyl transferase Similar to Streptomyces sphaeroides NovV SWALL:Q9L9E6 (EMBL:AF170880) (297 aa) fasta scores: E(): 6.5e-76%2C 66.78%25 id in 286 aa%2C and to Escherichia coli glucose-1-phosphate thymidylyltransferase RffH or b3789 SWALL:RFFH_ECOLI (SWALL:P27831) (293 aa) fasta scores: E(): 6.6e-69%2C 59.17%25 id in 289 aa gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=TW036 TW037 TW037 TW037 33457 34305 - putative glycosyl transferase Similar to Mycobacterium smegmatis dTDP-rha:a-D-glcnac-diphosphoryl polyprenol%2C a-3-L-rhamnosyl transferase WbbL SWALL:Q9RN50 (EMBL:AF187550) (296 aa) fasta scores: E(): 2.3e-30%2C 36.66%25 id in 270 aa gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=TW037 TW038 TW038 TW038 34302 35108 - putative ABC transport ATP-binding subunit Similar to Myxococcus xanthus O-antigen export system ATP-binding protein RfbB SWALL:RFBB_MYXXA (SWALL:Q50863) (437 aa) fasta scores: E(): 2.3e-30%2C 48.92%25 id in 233 aa gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=TW038 TW039 TW039 TW039 35160 36041 - putative ABC transport integral membrane subunit Similar to Pseudomonas aeruginosa membrane-spanning domain Msd Wzm SWALL:P72162 (EMBL:U63722) (265 aa) fasta scores: E(): 8.6e-21%2C 30.68%25 id in 277 aa%2C and to Myxococcus xanthus O-antigen export system permease protein RfbA SWALL:RFBA_MYXXA (SWALL:Q50862) (260 aa) fasta scores: E(): 1.2e-15%2C 26.83%25 id in 272 aa gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=TW039 TW040 TW040 TW040 36116 37087 + putative glycosyl transferase Similar to Actinobacillus actinomycetemcomitans DNA for glycosyltransferase%2C lytic transglycosylase%2C dTDP-4-rhamnose reductase SWALL:O05379 (EMBL:AB002668) (289 aa) fasta scores: E(): 3.2e-17%2C 30.73%25 id in 257 aa gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=TW040 TW041 TW041 TW041 37195 37551 - putative integral membrane protein No significant database matches gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=TW041 TW042 TW042 TW042 37548 38276 - putative glycosyl transferase Similar to Actinobacillus actinomycetemcomitans putative glycosyltransferase SWALL:Q9AQB2 (EMBL:AF213680) (234 aa) fasta scores: E(): 6.3e-16%2C 28.99%25 id in 238 aa gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=TW042 TW043 TW043 TW043 38634 40475 + putative large integral membrane protein No significant database matches gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=TW043 TW044 TW044 TW044 40712 40825 + hypothetical protein Doubtful CDS. No significant database matches gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=TW044 TW045 TW045 TW045 40845 40934 + putative small membrane protein Doubtful CDS. No significant database matches gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=TW045 TW046 TW046 TW046 41326 41835 + putative integral membrane protein No significant database matches gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=TW046 TW048 TW048 TW048 42189 42587 + putative secreted protein No significant database matches gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=TW048 TW049 TW049 TW049 42584 42982 + putative integral membrane protein No significant database matches gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=TW049 TW051 TW051 TW051 43109 43420 + putative integral membrane protein No significant database matches gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=TW051 TW052 TW052 TW052 43784 44215 + putative secreted protein No significant database matches gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=TW052 TW053 TW053 TW053 44219 44608 + putative integral membrane protein No significant database matches gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=TW053 TW054 TW054 TW054 44860 46251 - putative two component system sensor kinase Similar to Mycobacterium tuberculosis hypothetical protein Rv0758 or mt0783 or mtcy369.03 SWALL:P71815 (EMBL:Z80226) (485 aa) fasta scores: E(): 8.9e-37%2C 31.11%25 id in 466 aa%2C and to Streptomyces coelicolor putative two component system histidine kinase SCO4021 or 2SC10A7.25 SWALL:Q9ADN6 (EMBL:AL583945) (524 aa) fasta scores: E(): 5.5e-27%2C 37.73%25 id in 265 aa gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=TW054 TW055 TW055 TW055 46318 47001 - putative two component system response regulator Similar to Streptomyces coelicolor putative two component system response regulator SCO4020 or 2SC10A7.24 SWALL:Q9ADN7 (EMBL:AL583945) (271 aa) fasta scores: E(): 1.2e-40%2C 50.44%25 id in 226 aa gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=TW055 TW057 TW057 TW057 47266 47643 + cold shock protein B Similar to Streptomyces coelicolor cold shock protein B CspB or SCO4325 or SCD12A.08 SWALL:Q9KXN2 (EMBL:AL357524) (127 aa) fasta scores: E(): 8.1e-16%2C 42.06%25 id in 126 aa%2C and to Pseudomonas fragi cold shock protein CapB SWALL:CAPB_PSEFR (SWALL:P80415) (69 aa) fasta scores: E(): 0.0014%2C 38.09%25 id in 63 aa gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=TW057 TW058 TW058 TW058 47741 47968 + hypothetical protein No significant database matches gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=TW058 TW059 TW059 TW059 47971 48753 + putative sporulation/chromosome partition protein Similar to Streptomyces coelicolor putative partitioning or sporulation protein SCO1772 or SCI51.12c SWALL:Q9S228 (EMBL:AL109848) (340 aa) fasta scores: E(): 9.9e-52%2C 57.14%25 id in 252 aa%2C and to Bacillus subtilis sporulation initiation inhibitor protein Soj SWALL:SOJ_BACSU (SWALL:P37522) (253 aa) fasta scores: E(): 2.6e-38%2C 46.21%25 id in 251 aa gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=TW059 TW060 TW060 TW060 48827 49963 + putative oxidoreductase Similar to Staphylococcus aureus prephenate dehydrogenase TyrA or Mw1252 SWALL:BAB95117 (EMBL:AP004826) (363 aa) fasta scores: E(): 8.9e-10%2C 27.5%25 id in 389 aa gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=TW060 TW061 TW061 TW061 49945 52005 + putative GTP-binding protein Similar to many eg. Streptomyces coelicolor putative GTP binding protein SCO1758 or 2SCI34.11c SWALL:Q9EWW8 (EMBL:AL445403) (492 aa) fasta scores: E(): 8.6e-84%2C 49.49%25 id in 493 aa. N-terminal region contains match to Pfam PF02224 Cytidylate kinase. gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=TW061 TW062 TW062 TW062 52002 53279 - putative chorismate binding enzyme Similar to Pseudomonas putida anthranilate synthase component I TrpE SWALL:TRPE_PSEPU (SWALL:P20579) (493 aa) fasta scores: E(): 5e-16%2C 29.18%25 id in 281 aa gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=TW062 TW063 TW063 TW063 53375 54094 + putative ubiquinone/menaquinone methyltransferase Similar to Streptomyces coelicolor putative ubiquinone/menaquinone methyltransferase SCO4556 or SCD16a.27c SWALL:Q9XAP8 (EMBL:AL078618) (231 aa) fasta scores: E(): 1.6e-29%2C 42.17%25 id in 230 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 ubiquinone/menaquinone biosynthesis methyltransferase UbiE or b3833 or z5355 or ecs4763 SWALL:UBIE_ECOLI (SWALL:P27851) (251 aa) fasta scores: E(): 6.5e-23%2C 36.32%25 id in 245 aa gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=TW063 TW064 TW064 TW064 54106 55122 + putative polyprenyl diphosphate synthase Similar to Streptomyces coelicolor putative transferase SCO4583 or SCD20.01 SWALL:Q9F2X8 (EMBL:AL392148) (336 aa) fasta scores: E(): 3.3e-37%2C 38.19%25 id in 343 aa%2C and to Gluconobacter oxydans decaprenyl diphosphate synthase DdsA SWALL:O82832 (EMBL:AB006850) (315 aa) fasta scores: E(): 2.4e-23%2C 32.55%25 id in 301 aa gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=TW064 TW065 TW065 TW065 55141 56484 + putative ferredoxin/ferredoxin-NADP reductase Similar to Streptomyces coelicolor putative ferredoxin/ferredoxin-NADP reductase SCO0681 or SCF15.02 SWALL:Q9RK35 (EMBL:AL132856) (454 aa) fasta scores: E(): 1.3e-71%2C 43.55%25 id in 450 aa%2C and to Rattus norvegicus NADPH:adrenodoxin oxidoreductase%2C mitochondrial precursor FdxR SWALL:ADRO_RAT (SWALL:P56522) (494 aa) fasta scores: E(): 7.4e-33%2C 35.16%25 id in 455 aa gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=TW065 TW066 TW066 TW066 56824 57795 - putative iron-siderophore binding lipoprotein Similar to Streptomyces coelicolor putative iron-siderophore binding lipoprotein SCO0494 or SCF34.13c SWALL:Q9RK12 (EMBL:AL109974) (350 aa) fasta scores: E(): 7.7e-19%2C 30.97%25 id in 339 aa%2C and to Corynebacterium diphtheriae DtxR/iron regulated lipoprotein precursor Irp1 SWALL:Q46023 (EMBL:U02617) (355 aa) fasta scores: E(): 1e-12%2C 31.02%25 id in 303 aa gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=TW066 TW067 TW067 TW067 57921 58916 - putative iron-siderophore binding lipoprotein Similar to Streptomyces coelicolor putative iron-siderophore binding lipoprotein SCO0494 or SCF34.13c SWALL:Q9RK12 (EMBL:AL109974) (350 aa) fasta scores: E(): 4.2e-19%2C 29.82%25 id in 342 aa%2C and to Mycobacterium smegmatis FxtD SWALL:O87315 (EMBL:AF027770) (420 aa) fasta scores: E(): 2.7e-12%2C 31.09%25 id in 238 aa gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=TW067 TW068 TW068 TW068 59134 59919 - putative iron-siderophore uptake system ATP-binding component Similar to Escherichia coli ferric enterobactin transport ATP-binding protein FepC or b0588 SWALL:FEPC_ECOLI (SWALL:P23878) (271 aa) fasta scores: E(): 8.6e-42%2C 50%25 id in 250 aa gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=TW068 TW069 TW069 TW069 59903 60937 - putative iron-siderophore uptake system integral membrane component Similar to Escherichia coli ferric enterobactin transport system permease protein FepG or b0589 SWALL:FEPG_ECOLI (SWALL:P23877) (330 aa) fasta scores: E(): 1.2e-43%2C 39.93%25 id in 323 aa gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=TW069 TW070 TW070 TW070 60943 61908 - putative iron-siderophore uptake system integral membrane component Similar to Escherichia coli ferric enterobactin transport system permease protein FepD or b0590 SWALL:FEPD_ECOLI (SWALL:P23876) (334 aa) fasta scores: E(): 5.2e-33%2C 40%25 id in 305 aa gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=TW070 TW071 TW071 TW071 62354 62647 + putative regulator Similar to Staphylococcus aureus cadmium efflux system accessory protein homolog cadC SWALL:CADF_STAAU (SWALL:P37374) (121 aa) fasta scores: E(): 3e-07%2C 37.89%25 id in 95 aa gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=TW071 TW072 TW072 lysS lysS 62943 64580 - lysyl-tRNA synthetase Similar to Pyrococcus horikoshii lysyl-tRNA synthetase LysS or ph0224 SWALL:SYK_PYRHO (SWALL:O57963) (523 aa) fasta scores: E(): 2e-56%2C 33.2%25 id in 530 aa gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=TW072 TW073 TW073 panC panC 64669 65535 + pantoate--beta-alanine ligase Similar to Corynebacterium glutamicum pantoate--beta-alanine ligase PanC or cgl0113 SWALL:PANC_CORGL (SWALL:Q9X713) (279 aa) fasta scores: E(): 1.5e-27%2C 39.59%25 id in 293 aa gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=TW073 TW074 TW074 TW074 65832 67328 + putative phospholipase Similar to Escherichia coli cardiolipin synthetase Cls or Nov or b1249 SWALL:CLS_ECOLI (SWALL:P31071) (486 aa) fasta scores: E(): 4.9e-21%2C 30.64%25 id in 496 aa gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=TW074 TW075 TW075 TW075 67380 69902 + putative Clp-family ATP-binding protease/regulator Similar to Bacillus subtilis negative regulator of genetic competence ClpC/MecB SWALL:CLPC_BACSU (SWALL:P37571) (810 aa) fasta scores: E(): 3e-152%2C 56.66%25 id in 810 aa%2C and to Streptomyces coelicolor putative Vlp-family ATP-binding protease SCO3373 or SCE94.24c SWALL:Q9S6T8 (EMBL:AL049628) (841 aa) fasta scores: E(): 7.6e-189%2C 65.87%25 id in 838 aa gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=TW075 TW078 TW078 menD menD 70637 72220 + putative menaquinone biosynthesis protein MenD Similar to Bacillus subtilis menaquinone biosynthesis protein MenD [includes: 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase MenD SWALL:MEND_BACSU (SWALL:P23970) (580 aa) fasta scores: E(): 3.6e-17%2C 28.57%25 id in 525 aa%2C and to Mycobacterium leprae putative 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase / 2-oxoglutarate decarboxylase MenD or ML2270 SWALL:Q9CBB0 (EMBL:AL583925) (556 aa) fasta scores: E(): 1.4e-25%2C 32.95%25 id in 531 aa gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=TW078 TW079 TW079 TW079 72230 72775 + putative secreted protein No significant database matches gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=TW079 TW080 TW080 menA menA 72796 73707 + 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase Similar to Escherichia coli 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase MenA or b3930 SWALL:MENA_ECOLI (SWALL:P32166) (308 aa) fasta scores: E(): 8.9e-17%2C 33.45%25 id in 275 aa%2C and to Mycobacterium tuberculosis probable 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase MenA or Rv0534c or mt0558 or mtcy25d10.13C SWALL:MENA_MYCTU (SWALL:O06400) (292 aa) fasta scores: E(): 2.8e-24%2C 40.63%25 id in 251 aa gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=TW080 TW081 TW081 rpoB rpoB 73945 77412 + DNA-directed RNA polymerase beta chain Previously sequenced as Tropheryma whipplei DNA-directed RNA polymerase beta chain RpoB SWALL:RPOB_TROWH (SWALL:Q93GF2) (1216 aa) fasta scores: E(): 0%2C 99.56%25 id in 1155 aa. Similar to Mycobacterium tuberculosis DNA-directed RNA polymerase beta chain RpoB or Rv0667 or mt0695 or mtci376.08C SWALL:RPOB_MYCTU (SWALL:P47766) (1178 aa) fasta scores: E(): 0%2C 65.56%25 id in 1150 aa gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=TW081 TW082 TW082 rpoC rpoC 77472 81299 + DNA-directed RNA polymerase beta' chain Similar to Aquifex pyrophilus DNA-directed RNA polymerase beta' chain RpoC SWALL:RPOC_AQUPY (SWALL:Q9X6Y2) (1576 aa) fasta scores: E(): 3.4e-124%2C 40.11%25 id in 1573 aa gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=TW082 TW083 TW083 TW083 81523 82884 - putative hydrolase Similar to Synechocystis sp. serine esterase sll1284 SWALL:P73192 (EMBL:D90904) (204 aa) fasta scores: E(): 0.0001%2C 29.01%25 id in 193 aa gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=TW083 TW084 TW084 groS groS 82958 83341 + 10 kDa chaperonin Similar to Streptomyces coelicolor and Streptomyces lividans 10 kDa chaperonin GroS or SCO4761 or SC6G4.39 SWALL:CH10_STRCO (SWALL:P40172) (102 aa) fasta scores: E(): 3.9e-21%2C 68.42%25 id in 95 aa gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=TW084 TW085 TW085 guaB1 guaB1 83392 84867 + inosine-5'-monophosphate dehydrogenase Similar to Bacillus subtilis inosine-5'-monophosphate dehydrogenase GuaB or GnaB SWALL:IMDH_BACSU (SWALL:P21879) (513 aa) fasta scores: E(): 2.1e-87%2C 50.92%25 id in 489 aa gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=TW085 TW086 TW086 guaB2 guaB2 84872 85993 + putative inosine-5'-monophosphate dehydrogenase Similar to Streptomyces coelicolor putative inosine-5'-monophosphate dehydrogenase SCO4771 or SCD63.03 SWALL:Q9L0I6 (EMBL:AL161755) (374 aa) fasta scores: E(): 7.1e-82%2C 58.64%25 id in 370 aa%2C and to Escherichia coli and Escherichia coli O157:H7 inosine-5'-monophosphate dehydrogenase GuaB or b2508 or z3772 or ecs3370 SWALL:IMDH_ECOLI (SWALL:P06981) (488 aa) fasta scores: E(): 7.5e-05%2C 32.94%25 id in 170 aa gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=TW086 TW087 TW087 TW087 85986 86699 + putative membrane protein Similar to Streptomyces coelicolor putative membrane protein SCO1829 or SCI8.14 SWALL:Q9RJ39 (EMBL:AL132644) (290 aa) fasta scores: E(): 0.37%2C 25.79%25 id in 252 aa gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=TW087 TW088 TW088 TW088 86765 87202 + putative membrane protein Similar to Corynebacterium glutamicum hypothetical membrane protein Cgl2499 SWALL:BAB99892 (EMBL:AP005281) (118 aa) fasta scores: E(): 0.0015%2C 31.53%25 id in 130 aa gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=TW088 TW089 TW089 guaA guaA 87199 88710 + GMP synthase [glutamine-hydrolyzing] Similar to Bacillus subtilis GMP synthase [glutamine-hydrolyzing] GuaA SWALL:GUAA_BACSU (SWALL:P29727) (513 aa) fasta scores: E(): 2.2e-94%2C 50.49%25 id in 509 aa gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=TW089 TW090 TW090 TW090 88815 91046 + ATP-dependent DNA helicase Similar to Bacillus subtilis ATP-dependent DNA helicase PcrA SWALL:PCRA_BACSU (SWALL:O34580) (739 aa) fasta scores: E(): 1.1e-72%2C 41.42%25 id in 758 aa gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=TW090 TW092 TW092 TW092 91313 92797 + putative integral membrane protein No significant database matches gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=TW092 TW093 TW093 purN purN 92799 93437 + phosphoribosylglycinamide formyltransferase Similar to Mycobacterium paratuberculosis PurN SWALL:Q9RAJ6 (EMBL:AF191543) (209 aa) fasta scores: E(): 1.5e-21%2C 42.39%25 id in 184 aa and to Escherichia coli phosphoribosylglycinamide formyltransferase PurN or b2500 SWALL:PUR3_ECOLI (SWALL:P08179) (212 aa) fasta scores: E(): 2.1e-17%2C 36.2%25 id in 174 aa gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=TW093 TW094 TW094 purH purH 93477 95105 + bifunctional purine biosynthesis protein PurH Similar to Mycobacterium paratuberculosis PurH SWALL:Q9RAJ5 (EMBL:AF191543) (527 aa) fasta scores: E(): 8.2e-59%2C 50.46%25 id in 543 aa%2C and to Escherichia coli bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase purh or b4006 SWALL:PUR9_ECOLI (SWALL:P15639) (529 aa) fasta scores: E(): 2.6e-27%2C 39.48%25 id in 547 aa gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=TW094 TW095 TW095 TW095 95180 95521 - putative integral membrane protein No significant database matches gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=TW095 TW096 TW096 TW096 95602 96681 + putative integral membrane protein Weakly similar to Streptomyces coelicolor putative integral membrane transport protein SCO0079 or SCJ11.08c SWALL:Q9RI96 (EMBL:AL109949) (407 aa) fasta scores: E(): 2.3e-19%2C 26.37%25 id in 364 aa gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=TW096 TW097 TW097 truB truB 96582 97733 - tRNA pseudouridine synthase B Similar to Escherichia coli and Escherichia coli O157:H7 tRNA pseudouridine synthase B TruB or p35 or b3166 or z4527 or ecs4047 SWALL:TRUB_ECOLI (SWALL:P09171) (314 aa) fasta scores: E(): 2.2e-23%2C 35.24%25 id in 227 aa gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=TW097 TW098 TW098 TW098 97781 98905 + putative metalloprotease Similar to Mycobacterium tuberculosis hypothetical zinc metalloprotease Rv2869c or mt2937 or mtv003.15C SWALL:YS69_MYCTU (SWALL:O33351) (404 aa) fasta scores: E(): 8.7e-11%2C 34.51%25 id in 423 aa gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=TW098 TW099 TW099 dxr dxr 98907 100013 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase Similar to Pseudomonas aeruginosa 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr or pa3650 SWALL:DXR_PSEAE (SWALL:Q9KGU6) (396 aa) fasta scores: E(): 6.2e-42%2C 40.92%25 id in 391 aa gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=TW099 TW100 TW100 TW100 100065 100817 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO3845 or SCH69.15 SWALL:Q9XA19 (EMBL:AL079308) (515 aa) fasta scores: E(): 5.4e-22%2C 35.98%25 id in 239 aa%2C and to Rhizobium loti probable phosphoprotein phosphatase mlr2361 SWALL:Q98IK3 (EMBL:AP002999) (280 aa) fasta scores: E(): 1.4e-20%2C 36.08%25 id in 230 aa gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=TW100 TW101 TW101 TW101 100840 102411 - conserved hypothetical protein (putative ATP-binding) Weakly similar to Methanosarcina acetivorans hypothetical protein Ma1866 SWALL:Q8TPP0 (EMBL:AE010868) (613 aa) fasta scores: E(): 0.0012%2C 22.1%25 id in 579 aa gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=TW101 TW103 TW103 TW103 102673 102936 + putative membrane protein Doubtful CDS. No significant database matches gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=TW103 TW104 TW104 TW104 102921 103964 + putative integral membrane protein No significant database matches gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=TW104 TW105 TW105 TW105 103993 104355 + putative integral membrane protein No significant database matches gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=TW105 TW106 TW106 TW106 104352 105071 + putative ABC transport ATP-binding subunit Similar to Myxococcus xanthus PilH SWALL:O30385 (EMBL:AF003632) (326 aa) fasta scores: E(): 1.1e-12%2C 33.49%25 id in 206 aa%2C and to Streptomyces coelicolor putative ABC transporter ATP-binding protein SCO3633 or SCH10.11 SWALL:Q9X8Q0 (EMBL:AL049754) (311 aa) fasta scores: E(): 2.3e-11%2C 29.61%25 id in 233 aa gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=TW106 TW107 TW107 TW107 105068 105424 + putative integral membrane protein No significant database matches gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=TW107 TW108 TW108 TW108 107600 108649 - putative DNA recombinase Similar to Corynebacterium glutamicum integrase Cgl1419 SWALL:BAB98812 (EMBL:AP005278) (304 aa) fasta scores: E(): 6.6e-16%2C 38.73%25 id in 333 aa%2C and to Pseudomonas aeruginosa integrase Inti1 SWALL:Q9AIL0 (EMBL:AF263519) (337 aa) fasta scores: E(): 4.4e-12%2C 28.75%25 id in 306 aa gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=TW108 TW109 TW109 TW109 110016 110624 - putative NUDIX hydrolase Similar to Streptomyces coelicolor hypothetical protein sco1775 sco1775 or sci51.15C SWALL:Q9S225 (EMBL:AL109848) (211 aa) fasta scores: E(): 6e-27%2C 46.74%25 id in 169 aa%2C and to Bacillus subtilis adp-ribose pyrophosphatase nudF SWALL:ADPP_BACSU (SWALL:P54570) (185 aa) fasta scores: E(): 1.1e-13%2C 33.15%25 id in 184 aa gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=TW109 TW110 TW110 pyrG pyrG 111707 113344 - CTP synthetase Similar to Chlamydia trachomatis CTP synthetase PyrG or Ct183 SWALL:PYRG_CHLTR (SWALL:Q59321) (539 aa) fasta scores: E(): 4.8e-90%2C 48.3%25 id in 532 aa%2C and to Streptomyces coelicolor putative CTP synthetase PyrG or SCO1776 or SCI51.16c SWALL:Q9S224 (EMBL:AL109848) (549 aa) fasta scores: E(): 1.2e-104%2C 58.92%25 id in 538 aa gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=TW110 TW111 TW111 recN recN 115156 116793 - DNA repair protein RecN Similar to Escherichia coli DNA repair protein RecN or RadB or b2616 SWALL:RECN_ECOLI (SWALL:P05824) (553 aa) fasta scores: E(): 2.9e-30%2C 30.23%25 id in 559 aa gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=TW111 TW112 TW112 TW112 116812 117729 - putative ATP-NAD kinase Similar to Streptomyces coelicolor probable inorganic polyphosphate/ATP-NAD kinase PpnK or SCO1781 or SCI51.21c SWALL:PPNK_STRCO (SWALL:Q9S219) (301 aa) fasta scores: E(): 1.2e-29%2C 39.09%25 id in 220 aa gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=TW112 TW113 TW113 TW113 117757 124683 - WiSP family protein No significant database matches gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=TW113 TW114 TW114 rplI rplI 124733 125194 - 50s ribosomal protein L9 Similar to Streptomyces coelicolor 50s ribosomal protein L9 RplI or SCO3909 or SCH24.31 SWALL:RL9_STRCO (SWALL:Q9X8U5) (148 aa) fasta scores: E(): 3.6e-21%2C 44.66%25 id in 150 aa%2C and to Escherichia coli and Escherichia coli O157:H7 50s ribosomal protein l9 RplI or b4203 or z5812 or ecs5179 SWALL:RL9_ECOLI (SWALL:P02418) (149 aa) fasta scores: E(): 1.6e-11%2C 39.73%25 id in 151 aa gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=TW114 TW115 TW115 rpsR rpsR 125191 125442 - 30s ribosomal protein S18 Similar to Streptomyces coelicolor 30s ribosomal protein S18-2 RpsR2 or SCO3425 or SCE9.32c SWALL:R18B_STRCO (SWALL:Q9X8K4) (79 aa) fasta scores: E(): 2.5e-09%2C 52.77%25 id in 72 aa%2C and to Escherichia coli%2C Escherichia coli O157:H7 and Salmonella typhi 30s ribosomal protein S18 RpsR or b4202 or z5811 or ecs5178 or sty4749 SWALL:RS18_ECOLI (SWALL:P02374) (74 aa) fasta scores: E(): 2.1e-05%2C 43.39%25 id in 53 aa gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=TW115 TW116 TW116 ssb1 ssb1 125457 126017 - single-strand binding protein Similar to Escherichia coli and Escherichia coli O157:H7 single-strand binding protein Ssb or ExrB or LexC or b4059 or z5658 or ecs5041 SWALL:SSB_ECOLI (SWALL:P02339) (177 aa) fasta scores: E(): 8.8e-08%2C 27.95%25 id in 186 aa%2C and to Mycobacterium smegmatis single-stranded DNA-binding protein SWALL:Q9AFI5 (EMBL:AF349434) (165 aa) fasta scores: E(): 6.6e-32%2C 68.29%25 id in 123 aa gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=TW116 TW117 TW117 rpsF rpsF 126021 126323 - 30s ribosomal protein S6 Similar to Streptomyces coelicolor 30s ribosomal protein S6 RpsF or SCO3906 or SCH24.28 SWALL:RS6_STRCO (SWALL:Q9X8U2) (96 aa) fasta scores: E(): 9.4e-07%2C 35.86%25 id in 92 aa gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=TW117 TW119 TW119 purC purC 126672 127589 - phosphoribosylaminoimidazole-succinocarboxamide synthase Similar to Streptomyces coelicolor phosphoribosylaminoimidazole-succinocarboxamide synthase PurC or SCO4071 or SCD25.07 SWALL:Q9RKL1 (EMBL:AL118514) (299 aa) fasta scores: E(): 1e-38%2C 40.64%25 id in 310 aa%2C and to Mycobacterium tuberculosis phosphoribosylaminoimidazole-succinocarboxamide synthase PurC or Rv0780 or mt0804 or mtcy369.24 SWALL:PUR7_MYCTU (SWALL:Q59566) (297 aa) fasta scores: E(): 1.6e-28%2C 38.19%25 id in 288 aa gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=TW119 TW120 TW120 menB menB 128106 129023 + naphthoate synthase Similar to Escherichia coli naphthoate synthase MenB or b2262 SWALL:MENB_ECOLI (SWALL:P27290) (285 aa) fasta scores: E(): 1.3e-46%2C 48.76%25 id in 283 aa%2C and to Mycobacterium tuberculosis MenB or Rv0548c or mtcy25d10.27c or mt0573 SWALL:O06414 (EMBL:Z95558) (314 aa) fasta scores: E(): 4.5e-71%2C 63.39%25 id in 295 aa gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=TW120 TW121 TW121 menE menE 129025 130161 + O-succinylbenzoic acid--CoA ligase Similar to Escherichia coli O-succinylbenzoic acid--CoA ligase MenE or b2260 SWALL:MENE_ECOLI (SWALL:P37353) (451 aa) fasta scores: E(): 2.5e-10%2C 28.11%25 id in 345 aa%2C and to Mycobacterium tuberculosis MenE or Rv0542c or mtcy25d10.21c or mt0567 SWALL:O06408 (EMBL:Z95558) (362 aa) fasta scores: E(): 2.5e-29%2C 32.84%25 id in 338 aa gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=TW121 TW124 TW124 ideR ideR 130688 131341 + iron-dependent repressor Similar to Mycobacterium tuberculosis iron-dependent repressor IdeR or DtxR or Rv2711 or mt2784 or mtcy05a6.32 SWALL:IDER_MYCTU (SWALL:Q50495) (230 aa) fasta scores: E(): 6.4e-29%2C 42.98%25 id in 221 aa%2C and to Streptomyces lividans and Streptomyces coelicolor iron repressor DesR or DmdR1 or SCO4394 or SCD10.26 SWALL:Q54343 (EMBL:Z50049) (230 aa) fasta scores: E(): 3.8e-32%2C 47.23%25 id in 199 aa gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=TW124 TW125 TW125 rpmB rpmB 131520 131756 + 50s ribosomal protein L28 Similar to Escherichia coli 50s ribosomal protein l28 RpmB or b3637 or z5061 or ecs4512 SWALL:RL28_ECOLI (SWALL:P02428) (77 aa) fasta scores: E(): 2.9e-10%2C 51.31%25 id in 76 aa gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=TW125 TW126 TW126 rpmG rpmG 131756 131926 + 50s ribosomal protein L33 Similar to Escherichia coli 50s ribosomal protein l33 RpmG or b3636 SWALL:RL33_ECOLI (SWALL:P02436) (54 aa) fasta scores: E(): 3.6e-07%2C 43.13%25 id in 51 aa%2C and to Mycobacterium tuberculosis 50s ribosomal protein l33 type 1 RpmG or Rv2057c or mt2117.1 or mtcy63a.03 SWALL:R331_MYCTU (SWALL:O86356) (54 aa) fasta scores: E(): 3.1e-17%2C 78.84%25 id in 52 aa gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=TW126 TW127 TW127 rpsN rpsN 131927 132232 + 30s ribosomal protein S14 Similar to Escherichia coli 30s ribosomal protein S14 RpsN or b3307 or z4677 or ecs4172 SWALL:RS14_ECOLI (SWALL:P02370) (100 aa) fasta scores: E(): 5.8e-12%2C 47%25 id in 100 aa%2C and to Mycobacterium tuberculosis 30s ribosomal protein S14-2 RpsN2 or Rv2056c or mt2117 or mtcy63a.04 SWALL:R14B_MYCTU (SWALL:O86355) (101 aa) fasta scores: E(): 1.2e-21%2C 61.38%25 id in 101 aa gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=TW127 TW128 TW128 hup hup 132298 132579 + DNA-binding protein HU-alpha Similar to Escherichia coli DNA-binding protein HU-alpha HupA or b4000 or z5576 or ecs4923 SWALL:DBHA_ECOLI (SWALL:P02342) (90 aa) fasta scores: E(): 7.7e-08%2C 37.77%25 id in 90 aa%2C and to Streptomyces coelicolor%2C and Streptomyces lividans DNA-binding protein HU 1 Hup1 or Hup or SCO2950 or SCE59.09 SWALL:DBH1_STRCO (SWALL:O06447) (93 aa) fasta scores: E(): 5.1e-13%2C 50.54%25 id in 91 aa gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=TW128 TW129 TW129 TW129 132629 134734 + putative integral membrane protein Similar to Mycobacterium tuberculosis hypothetical protein Rv0102 or mt0111 or mtcy251.21 SWALL:Y102_MYCTU (SWALL:Q10897) (661 aa) fasta scores: E(): 8.5e-38%2C 31.79%25 id in 478 aa%2C and to Streptomyces coelicolor putative integral membrane protein SCO1215 or 2SCG58.15 SWALL:Q9FC98 (EMBL:AL391017) (316 aa) fasta scores: E(): 3.3e-37%2C 40.13%25 id in 304 aa gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=TW129 TW130 TW130 TW130 134760 136832 + putative helicase regulator Similar to Anabaena sp. hypothetical protein Alr4398 SWALL:Q8YP09 (EMBL:AP003596) (1075 aa) fasta scores: E(): 9.6e-17%2C 26.54%25 id in 584 aa%2C and to Drosophila melanogaster IswI protein or cg8625 SWALL:ISWI_DROME (SWALL:Q24368) (1027 aa) fasta scores: E(): 2.3e-15%2C 26.16%25 id in 474 aa gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=TW130 TW131 TW131 tufA tufA 136972 138165 + elongation factor TU-1 Similar to Escherichia coli elongation factor TU (TufA or b3339) and (TufB or b3980) SWALL:EFTU_ECOLI (SWALL:P02990) (393 aa) fasta scores: E(): 1.1e-103%2C 70.38%25 id in 395 aa%2C and to Micrococcus luteus elongation factor TU Tuf or TufA SWALL:EFTU_MICLU (SWALL:P09953) (396 aa) fasta scores: E(): 6.3e-119%2C 82.02%25 id in 395 aa gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=TW131 TW132 TW132 TW132 138453 140111 - putative integral membrane protein No significant database matches gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=TW132 TW133 TW133 manA manA 140623 141990 + mannose-6-phosphate isomerase Similar to Escherichia coli mannose-6-phosphate isomerase ManA or Pmi or b1613 SWALL:MANA_ECOLI (SWALL:P00946) (391 aa) fasta scores: E(): 2.9e-15%2C 30.23%25 id in 387 aa%2C and to Streptomyces coelicolor mannose-6-phosphate isomerase ManA or SCO3025 or SCE34.06c SWALL:Q9KZL9 (EMBL:AL353862) (383 aa) fasta scores: E(): 1.5e-22%2C 34.36%25 id in 323 aa gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=TW133 TW134 TW134 TW134 142042 142350 + WhiB-like regulatory protein Similar to Streptomyces griseocarneus WhiB-STV protein SWALL:Q06387 (EMBL:X68708) (87 aa) fasta scores: E(): 1.6e-20%2C 80%25 id in 70 aa%2C and to Streptomyces coelicolor regulatory protein WhiB or SCO3034 or SCE34.15C SWALL:Q53963 (EMBL:X62287) (87 aa) fasta scores: E(): 1.6e-20%2C 80%25 id in 70 aa gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=TW134 TW135 TW135 TW135 142512 144908 + putative integral membrane protein Similar to Streptomyces aureofaciens transmembrane protein WhiB2 SWALL:Q53785 (EMBL:L22864) (1219 aa) fasta scores: E(): 1.5e-06%2C 21.76%25 id in 896 aa%2C and to Streptomyces coelicolor putative integral membrane protein SCO3033 or SCE34.14c SWALL:Q9KZL1 (EMBL:AL353862) (1268 aa) fasta scores: E(): 2e-06%2C 24.06%25 id in 939 aa gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=TW135 TW136 TW136 TW136 144961 146340 + putative secreted protein Similar to Streptomyces coelicolor putative secreted protein SCO3032 or SCE34.13c SWALL:Q9KZL2 (EMBL:AL353862) (506 aa) fasta scores: E(): 0.01%2C 24.83%25 id in 294 aa gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=TW136 TW137 TW137 manB manB 146782 148212 + phosphomannomutase Similar to Escherichia coli phosphomannomutase ManB or RfbK or RfbK2 SWALL:RFK9_ECOLI (SWALL:P37755) (456 aa) fasta scores: E(): 4.3e-48%2C 34.44%25 id in 450 aa%2C and to Streptomyces coelicolor phosphomannomutase ManB or SCO3028 or SCE34.09c SWALL:Q9KZL6 (EMBL:AL353862) (454 aa) fasta scores: E(): 6.8e-88%2C 51.96%25 id in 458 aa gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=TW137 TW138 TW138 TW138 148563 149258 + conserved hypothetical protein (possible ATP-binding) Similar to Corynebacterium glutamicum predicted amidophosphoribosyltransferases Cgl0757 SWALL:BAB98150 (EMBL:AP005276) (196 aa) fasta scores: E(): 4.4e-06%2C 23.98%25 id in 196 aa%2C and to Deinococcus radiodurans competence protein ComF%2C putative dr1389 SWALL:Q9RUJ7 (EMBL:AE001984) (219 aa) fasta scores: E(): 2.2e-05%2C 27.17%25 id in 195 aa gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=TW138 TW139 TW139 secA secA 149502 152045 + preprotein translocase SecA subunit Similar to Streptomyces griseus preprotein translocase SecA subunit secA SWALL:SECA_STRGR (SWALL:P95759) (940 aa) fasta scores: E(): 5.6e-138%2C 60.32%25 id in 862 aa gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=TW139 TW140 TW140 TW140 152632 152805 + hypothetical protein Doubtful CDS. No significant database matches gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=TW140 TW141 TW141 TW141 152950 153696 + putative membrane/secreted protein No significant database matches gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=TW141 TW142 TW142 TW142 153705 154487 + putative regulator Similar to Bacillus subtilis sporulation initiation inhibitor protein SoJ SWALL:SOJ_BACSU (SWALL:P37522) (253 aa) fasta scores: E(): 0.00051%2C 30.88%25 id in 136 aa gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=TW142 TW143 TW143 TW143 154735 155181 + hypothetical phase-variable integral membrane protein No significant database matches. Frameshift at potentially variable G(11) tract after aa 70 gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=TW143 TW144 TW144 gcvP gcvP 155275 158181 + glycine dehydrogenase [decarboxylating] Similar to Escherichia coli glycine dehydrogenase [decarboxylating] GcvP or b2903 SWALL:GCSP_ECOLI (SWALL:P33195) (956 aa) fasta scores: E(): 4.4e-106%2C 48.71%25 id in 973 aa%2C and to Mycobacterium tuberculosis probable glycine dehydrogenase [decarboxylating] GcvP or GcvB or Rv1832 or mt1880 or mtcy1a11.11C SWALL:GCSP_MYCTU (SWALL:Q50601) (941 aa) fasta scores: E(): 2e-114%2C 51.27%25 id in 981 aa gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=TW144 TW145 TW145 TW145 158391 159971 + putative ABC transporter substrate-binding protein Similar to Streptomyces coelicolor putative peptide transport system secreted peptide-binding protein SCO5117 or SC9E12.02 SWALL:Q9F353 (EMBL:AL391751) (544 aa) fasta scores: E(): 1.2e-51%2C 33.57%25 id in 551 aa gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=TW145 TW146 TW146 TW146 159968 161569 + putative ABC transporter substrate-binding protein Similar to Streptomyces coelicolor putative peptide transport system secreted peptide-binding protein SCO5117 or SC9E12.02 SWALL:Q9F353 (EMBL:AL391751) (544 aa) fasta scores: E(): 3.3e-48%2C 33.39%25 id in 512 aa gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=TW146 TW147 TW147 TW147 161570 162175 - putative ABC transporter integral membrane subunit Similar to Rhizobium meliloti hypothetical transmembrane protein smc00963 r00889 or smc00963 SWALL:Q92RI2 (EMBL:AL591785) (201 aa) fasta scores: E(): 2.3e-12%2C 34.23%25 id in 184 aa gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=TW147 TW148 TW148 TW148 162302 162985 - putative ABC transporter ATP-binding subunit Similar to Deinococcus radiodurans ABC transporter%2C ATP-binding protein dr2469 SWALL:Q9RRL9 (EMBL:AE002076) (226 aa) fasta scores: E(): 3.2e-27%2C 42.98%25 id in 221 aa gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=TW148 TW149 TW149 TW149 163138 164073 + putative ABC transporter integral membrane subunit Similar to Streptomyces coelicolor putative peptide transport system integral membrane protein SCO5118 or SC9E12.03 SWALL:Q9F352 (EMBL:AL391751) (307 aa) fasta scores: E(): 6.3e-45%2C 42.15%25 id in 306 aa%2C and to Bacillus subtilis oligopeptide transport system permease protein OppB SWALL:OPPB_BACSU (SWALL:P24138) (311 aa) fasta scores: E(): 2.4e-28%2C 34.07%25 id in 314 aa gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=TW149 TW150 TW150 TW150 164075 165040 + putative ABC transporter system integral membrane subunit Similar to Corynebacterium glutamicum ABC-type transporter%2C permease components cgl1992 SWALL:BAB99385 (EMBL:AP005280) (333 aa) fasta scores: E(): 2.3e-50%2C 45.77%25 id in 308 aa%2C and to Bacillus subtilis oligopeptide transport system permease protein OppC or Spo0KC SWALL:OPPC_BACSU (SWALL:P24139) (305 aa) fasta scores: E(): 6.1e-29%2C 31.77%25 id in 299 aa gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=TW150 TW151 TW151 TW151 165037 166665 + putative ABC transporter ATP-binding subunit Similar to Mycobacterium tuberculosis putative peptide ABC transporter ATP-binding protein Rv3663c or mtv025.011c or mt3764 SWALL:O69631 (EMBL:AL022121) (548 aa) fasta scores: E(): 2e-88%2C 52.67%25 id in 543 aa gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=TW151 TW152 TW152 TW152 171897 172667 - putative membrane protein Doubtful CDS. No significant database matches gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=TW152 TW153 TW153 rplM rplM 178288 178713 + 50S ribosomal protein L13 Similar to Escherichia coli 50s ribosomal protein L13 RplM or b3231 or z4589 or ecs4104 or stm3345 or sty3525 SWALL:RL13_ECOLI (SWALL:P02410) (142 aa) fasta scores: E(): 3.8e-25%2C 54.33%25 id in 127 aa%2C and to Streptomyces coelicolor 50s ribosomal protein L13 RplM or SCO4734 or SC6G4.12 SWALL:RL13_STRCO (SWALL:Q53874) (147 aa) fasta scores: E(): 3e-29%2C 52.94%25 id in 136 aa. N-terminus truncated relative to homologues. gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=TW153 TW154 TW154 rpsI rpsI 178713 179177 + 30s ribosomal protein S9 Similar to Escherichia coli 30s ribosomal protein S9 RpsI or b3230 or z4588 or ecs4103 SWALL:RS9_ECOLI (SWALL:P02363) (129 aa) fasta scores: E(): 2.6e-20%2C 51.61%25 id in 124 aa%2C and to Streptomyces coelicolor 30s ribosomal protein S9 RpsI or SCO4735 or SC6G4.13 SWALL:RS9_STRCO (SWALL:Q53875) (170 aa) fasta scores: E(): 2.4e-25%2C 61.6%25 id in 125 aa gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=TW154 TW155 TW155 TW155 179181 180542 + putative phospho-sugar mutase Similar to Streptomyces coelicolor putative phospho-sugar mutase SCO4736 or sc6g4.14 SWALL:Q53876 (EMBL:AL031317) (452 aa) fasta scores: E(): 3.6e-76%2C 50%25 id in 458 aa gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=TW155 TW156 TW156 coaA coaA 180517 181272 - pantothenate kinase Similar to Escherichia coli pantothenate kinase CoaA or Rts or PanK or b3974 or z5545 or ecs4901 SWALL:COAA_ECOLI (SWALL:P15044) (316 aa) fasta scores: E(): 4.5e-12%2C 39.66%25 id in 242 aa gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=TW156 TW157 TW157 TW157 181855 183954 + WiSP family protein No significant database matches. Has possible N-terminal secretion signal sequence and 3 possible membrane spanning regions in the C-terminal portion. Similar to CDS TW161 - TW157 residues 8-275 identical to TW161 residues 7-274%2C though not similar at sequence level TW161 C-terminal portion also contains 3 possible membrane spanning regions. Region following identity with TW161 is an array of small repeats. gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=TW157 TW158 TW158 glmS glmS 184178 186028 + glucosamine--fructose-6-phosphate aminotransferase [isomerizing] Similar to Escherichia coli glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS or b3729 SWALL:GLMS_ECOLI (SWALL:P17169) (608 aa) fasta scores: E(): 9.8e-90%2C 42.23%25 id in 618 aa%2C and to Streptomyces coelicolor glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS or SCO4740 or SC6G4.18 SWALL:GLMS_STRCO (SWALL:O86781) (614 aa) fasta scores: E(): 1.5e-125%2C 53.73%25 id in 616 aa gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=TW158 TW159 TW159 ispE ispE 187878 189107 - 4-diphosphocytidyl-2-c-methyl-D-erythritol kinase Similar to Escherichia coli 4-diphosphocytidyl-2-c-methyl-D-erythritol kinase IspE or Ipk or b1208 or z1979 or ecs1713 SWALL:ISPE_ECOLI (SWALL:P24209) (283 aa) fasta scores: E(): 7.7e-07%2C 28.95%25 id in 221 aa%2C and to Streptomyces coelicolor 4-diphosphocytidyl-2-c-methyl-D-erythritol kinase IspE or SCO3148 or SCE66.27c SWALL:ISPE_STRCO (SWALL:Q9K3R6) (299 aa) fasta scores: E(): 5.9e-21%2C 39.07%25 id in 238 aa. Note possible alternative translational start sites. gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=TW159 TW160 TW160 TW160 191188 192282 + putative membrane protein Similar to Corynebacterium glutamicum uncharacterized membrane proteins cgl2282 SWALL:BAB99675 (EMBL:AP005281) (264 aa) fasta scores: E(): 2.1e-24%2C 43.16%25 id in 278 aa gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=TW160 TW161 TW161 TW161 193769 196159 + WiSP family protein No significant database matches. Has possible N-terminal secretion signal sequence and 3 possible membrane spanning regions in the C-terminal portion. Similar to CDS TW157 - TW161 residues 7-274 identical to TW157 residues 8-275%2C though not similar at sequence level TW157 C-terminal portion also contains 3 possible membrane spanning regions. gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=TW161 TW162 TW162 TW162 197697 199415 - putative ABC transporter (ATP-binding and integral membrane) Similar to Escherichia coli transport ATP-binding protein CydC or MdrA or MdrH or SurB or b0886 SWALL:CYDC_ECOLI (SWALL:P23886) (573 aa) fasta scores: E(): 4.8e-32%2C 27.92%25 id in 573 aa gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=TW162 TW163 TW163 TW163 199447 201318 - putative ABC transporter (ATP-binding and integral membrane) Similar to Clostridium perfringens probable ABC transporter cpe0226 SWALL:Q8XNV6 (EMBL:AP003185) (576 aa) fasta scores: E(): 2.7e-35%2C 26.56%25 id in 576 aa gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=TW163 TW164 TW164 TW164 202542 203240 - putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO2196 or SC5F7.05 or SC3H12.04 SWALL:Q9S2P0 (EMBL:AL096872) (234 aa) fasta scores: E(): 5.7e-15%2C 31.89%25 id in 232 aa gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=TW164 TW165 TW165 TW165 203335 204531 + putative serine/threonine protein kinase Similar to Streptomyces coelicolor putative serine/threonine protein kinase SCO1724 or SCI11.13 SWALL:Q9S2A6 (EMBL:AL096849) (550 aa) fasta scores: E(): 0.0015%2C 30.3%25 id in 165 aa%2C and to Amycolatopsis mediterranei serine/threonine kinase PkmA SWALL:Q9KK90 (EMBL:AF135382) (589 aa) fasta scores: E(): 0.0043%2C 25.59%25 id in 168 aa gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=TW165 TW166 TW166 TW166 205328 207172 + putative transcription factor Similar to Caulobacter crescentus elongation factor TU family protein cc0741 SWALL:Q9AA65 (EMBL:AE005749) (610 aa) fasta scores: E(): 4e-83%2C 43.18%25 id in 616 aa%2C and to Streptomyces coelicolor putative GTP-binding protein SCO5111 or SCBAC31E11.07 SWALL:Q93IU4 (EMBL:AL596043) (635 aa) fasta scores: E(): 8.9e-80%2C 56.85%25 id in 635 aa gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=TW166 TW167 TW167 TW167 207488 208330 + conserved hypothetical protein Has C-terminal similarity to proteins of undefined function. Similar to Streptococcus pyogenes hypothetical protein Spym18_1743 SWALL:AAL98271 (EMBL:AE010084) (153 aa) fasta scores: E(): 1.6e-10%2C 40%25 id in 140 aa gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=TW167 TW169 TW169 TW169 208351 209856 + conserved hypothetical protein Localised similarity to proteins of unknown function. C-terminal similar to Thermoanaerobacter tengcongensis acetyltransferases RimI3 or tte0537 SWALL:Q8RC99 (EMBL:AE013024) (149 aa) fasta scores: E(): 5e-10%2C 37.24%25 id in 145 aa. N-termional similar to Corynebacterium glutamicum inactive homologs of metal-dependent proteases%2C putative molecular chaperones cgl0592 SWALL:BAB97985 (EMBL:AP005275) (225 aa) fasta scores: E(): 0.00017%2C 39.62%25 id in 106 aa gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=TW169 TW170 TW170 gcp gcp 209856 211061 + O-sialoglycoprotein endopeptidase Similar to Pasteurella haemolytica O-sialoglycoprotein endopeptidase Gcp SWALL:GCP_PASHA (SWALL:P36175) (325 aa) fasta scores: E(): 1.5e-13%2C 36.97%25 id in 384 aa%2C and to Streptomyces coelicolor probable O-sialoglycoprotein endopeptidase Gcp or SCO4752 or SC6G4.30 SWALL:GCP_STRCO (SWALL:O86793) (374 aa) fasta scores: E(): 4.3e-20%2C 43.71%25 id in 398 aa gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=TW170 TW171 TW171 TW171 212254 213477 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO3406 or SCE9.13c SWALL:Q9X8I6 (EMBL:AL049841) (352 aa) fasta scores: E(): 2.6e-11%2C 32.66%25 id in 401 aa gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=TW171 TW172 TW172 hpt hpt 213482 213985 + hypoxanthine phosphoribosyltransferase Similar to Salmonella typhimurium hypoxanthine phosphoribosyltransferase Hpt or Stm0170 SWALL:HPRT_SALTY (SWALL:O33799) (178 aa) fasta scores: E(): 7.7e-25%2C 46.01%25 id in 163 aa%2C and to Streptomyces coelicolor putative hypoxanthine phosphoribosyltransferase HprT or SCO3405 or SCE9.12c SWALL:Q9X8I5 (EMBL:AL049841) (187 aa) fasta scores: E(): 7.9e-35%2C 54.81%25 id in 166 aa gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=TW172 TW173 TW173 ftsH ftsH 213988 215988 + FtsH-like putative cell division protein Similar to Streptococcus pneumoniae cell division protein FtsH or sp0013 SWALL:FTSH_STRPN (SWALL:O69076) (652 aa) fasta scores: E(): 2.5e-86%2C 54.38%25 id in 502 aa%2C and to Streptomyces coelicolor cell division protein FtsH homolog FtsH2 or SCO3404 or SCE9.11c SWALL:Q9X8I4 (EMBL:AL049841) (668 aa) fasta scores: E(): 4.5e-119%2C 55.12%25 id in 664 aa gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=TW173 TW174 TW174 folE folE 216002 216547 + GTP cyclohydrolase I Similar to Bacillus subtilis GTP cyclohydrolase I FolE or MtrA SWALL:GCH1_BACSU (SWALL:P19465) (190 aa) fasta scores: E(): 1.9e-12%2C 33.53%25 id in 167 aa%2C and to Bacillus halodurans GTP cyclohydrolase I FolE or MtrA or bh1646 SWALL:GCH1_BACHD (SWALL:Q9KCC7) (188 aa) fasta scores: E(): 2.6e-14%2C 32.25%25 id in 186 aa gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=TW174 TW175 TW175 folP folP 216584 218881 + dihydropteroate synthase Similar to Bacillus subtilis dihydropteroate synthase Sul SWALL:DHPS_BACSU (SWALL:P28822) (285 aa) fasta scores: E(): 8.7e-28%2C 40.61%25 id in 261 aa%2C and to Streptomyces coelicolor putative dihydropteroate synthase FolP or SCO3398 or SCE9.05 SWALL:Q9X8H8 (EMBL:AL049841) (288 aa) fasta scores: E(): 1.7e-38%2C 46.26%25 id in 268 aa gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=TW175 TW176 TW176 TW176 218878 219327 + putative integral membrane protein No significant database matches gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=TW176 TW177 TW177 TW177 219552 220313 + putative ABC transporter ATP-binding subunit Similar to Lactococcus lactis NisF protein NisF SWALL:Q48635 (EMBL:Z29363) (225 aa) fasta scores: E(): 2.3e-15%2C 32.57%25 id in 221 aa gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=TW177 TW178 TW178 TW178 220402 221079 + putative integral membrane protein No significant database matches gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=TW178 TW179 TW179 ung ung 221086 221778 + uracil DNA glycosylase Similar to Streptomyces coelicolor uracil DNA glycosylase Ung or SCO1114 or 2SCG38.07 SWALL:Q9EX12 (EMBL:AL445503) (225 aa) fasta scores: E(): 2.6e-52%2C 59.17%25 id in 218 aa%2C and to Homo sapiens uracil-DNA glycosylase%2C mitochondrial precursor Ung or Dgu or Ung15 SWALL:UNG_HUMAN (SWALL:P13051) (304 aa) fasta scores: E(): 6.1e-26%2C 42.18%25 id in 192 aa gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=TW179 TW180 TW180 ribF ribF 221811 222749 + riboflavin biosynthesis protein RibF [includes: riboflavin kinase] Similar to Escherichia coli riboflavin biosynthesis protein RibF [includes: riboflavin kinase] or b0025 or z0029 or ecs0028 SWALL:RIBF_ECOLI (SWALL:P08391) (313 aa) fasta scores: E(): 8.3e-30%2C 35.33%25 id in 317 aa gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=TW180 TW181 TW181 TW181 223106 223651 + putative secreted protein No significant database matches gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=TW181 TW182 TW182 TW182 223721 224497 + putative integral membrane protein No significant database matches gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=TW182 TW184 TW184 TW184 224723 225307 + putative peptidase Similar to Aeromonas hydrophila type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase tapD] SWALL:LEP4_AERHY (SWALL:P45794) (290 aa) fasta scores: E(): 1.5e-05%2C 29.44%25 id in 197 aa%2C and to Escherichia coli leader peptidase HopD SWALL:HOPD_ECOLI (SWALL:O68932) (155 aa) fasta scores: E(): 0.0017%2C 32.7%25 id in 159 aa gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=TW184 TW186 TW186 TW186 225473 226039 + putative integral membrane protein gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=TW186 TW187 TW187 TW187 226082 226408 + ferredoxin Similar to Streptomyces griseus ferredoxin SWALL:FER_STRGR (SWALL:P13279) (105 aa) fasta scores: E(): 1.8e-33%2C 79.2%25 id in 101 aa gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=TW187 TW188 TW188 TW188 226431 227699 + putative integral membrane protein Weakly similar to Streptomyces coelicolor putative integral membrane protein SCO1752 or 2SCI34.05 SWALL:Q9EWX4 (EMBL:AL445403) (396 aa) fasta scores: E(): 4.1e-05%2C 24.72%25 id in 364 aa gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=TW188 TW189 TW189 TW189 228065 228706 + putative membrane protein No significant database matches. Possible coiled-coil region at residues 42-80. gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=TW189 TW190 TW190 mdmC mdmC 228948 229565 - putative O-methyltransferase Similar to Streptomyces mycarofaciens O-methyltransferase MdmC SWALL:MDMC_STRMY (SWALL:Q00719) (221 aa) fasta scores: E(): 8e-05%2C 28.57%25 id in 175 aa gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=TW190 TW191 TW191 TW191 229601 229825 + putative secreted protein N-terminus similar to that of Caulobacter crescentus hypothetical protein Cc2002 SWALL:Q9A6T1 (EMBL:AE005873) (200 aa) fasta scores: E(): 5.2%2C 31.91%25 id in 47 aa gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=TW191 TW192 TW192 TW192 229953 230495 + possible integral membrane protein No significant database matches gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=TW192 TW193 TW193 TW193 230519 231298 + possible integral membrane protein No significant database matches gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=TW193 TW194 TW194 aroA aroA 231435 232766 - 3-phosphoshikimate 1-carboxyvinyltransferase Similar to Mycobacterium tuberculosis 3-phosphoshikimate 1-carboxyvinyltransferase AroA or Rv3227 or mt3324 or mtcy20b11.02 SWALL:AROA_MYCTU (SWALL:P22487) (450 aa) fasta scores: E(): 1.6e-52%2C 42.4%25 id in 441 aa gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=TW194 TW195 TW195 recG recG 232840 234861 + ATP-dependent DNA helicase RecG Similar to Staphylococcus aureus ATP-dependent DNA helicase RecG SWALL:RECG_STAAU (SWALL:O50581) (686 aa) fasta scores: E(): 3.9e-62%2C 32.43%25 id in 666 aa gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=TW195 TW196 TW196 coaD coaD 234982 235512 + phosphopantetheine adenylyltransferase Similar to Escherichia coli phosphopantetheine adenylyltransferase CoaD or KdtB or b3634 or z5058 or ecs4509 SWALL:COAD_ECOLI (SWALL:P23875) (159 aa) fasta scores: E(): 3.8e-06%2C 33.13%25 id in 169 aa gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=TW196 TW197 TW197 TW197 235965 236714 - putative membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO3849 or SCH69.19c SWALL:Q9XA15 (EMBL:AL079308) (253 aa) fasta scores: E(): 9.6e-09%2C 25.6%25 id in 250 aa gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=TW197 TW198 TW198 rpmF rpmF 236982 237179 + 50s ribosomal protein L32 Similar to Bacillus stearothermophilus 50s ribosomal protein L32 RpmF SWALL:RL32_BACST (SWALL:P07840) (56 aa) fasta scores: E(): 4.3%2C 34.92%25 id in 63 aa%2C and to Mycobacterium tuberculosis 50s ribosomal protein L32 RpmF or Rv0979.1c or mt1007 or mtv044.07c.1 SWALL:RL32_MYCTU (SWALL:P58287) (57 aa) fasta scores: E(): 0.00062%2C 55.1%25 id in 49 aa gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=TW198 TW199 TW199 rnc rnc 237204 237851 + ribonuclease III Similar to Escherichia coli ribonuclease III Rnc or b2567 or z3848 or ecs3433 SWALL:RNC_ECOLI (SWALL:P05797) (226 aa) fasta scores: E(): 3e-18%2C 35%25 id in 220 aa%2C and to Streptomyces coelicolor ribonuclease III Rnc or SCO5572 or SC7A1.16 SWALL:RNC_STRCO (SWALL:Q9ZBQ7) (272 aa) fasta scores: E(): 3.9e-26%2C 42.05%25 id in 214 aa gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=TW199 TW200 TW200 TW200 237969 239126 + putative ABC transporter branched chain amino acid binding protein Similar to Pseudomonas aeruginosa leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein precursor BraC or pa1074 SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 3.2e-22%2C 28.78%25 id in 337 aa gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=TW200 TW201 TW201 TW201 239174 240178 + putative ABC transporter branched chain amino acid transport permease Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivH or b3457 or z4827 or ecs4304 SWALL:LIVH_ECOLI (SWALL:P08340) (308 aa) fasta scores: E(): 1.1e-30%2C 42.05%25 id in 302 aa gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=TW201 TW202 TW202 TW202 240175 241269 + putative ABC transporter branched chain amino acid transport permease Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivM or b3456 SWALL:LIVM_ECOLI (SWALL:P22729) (425 aa) fasta scores: E(): 2.9e-14%2C 36.19%25 id in 326 aa gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=TW202 TW203 TW203 TW203 241271 242053 + putative branched chain amino acid ABC transporter ATP-binding subunit Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or b3455 or z4825 or ecs4302 SWALL:LIVG_ECOLI (SWALL:P22730) (255 aa) fasta scores: E(): 4.7e-36%2C 47.43%25 id in 253 aa gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=TW203 TW204 TW204 TW204 242078 242761 + putative branched chain amino acid ABC transporter ATP-binding subunit Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or b3454 SWALL:LIVF_ECOLI (SWALL:P22731) (237 aa) fasta scores: E(): 1.4e-33%2C 52.42%25 id in 227 aa gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=TW204 TW205 TW205 ftsY ftsY 242928 243596 + putative SRP54-type protein Similar to Escherichia coli cell division protein FtsY or b3464 SWALL:FTSY_ECOLI (SWALL:P10121) (497 aa) fasta scores: E(): 4.8e-30%2C 47.32%25 id in 224 aa gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=TW205 TW206 TW206 rpsJ rpsJ 243756 244064 + 30S ribosomal protein S10 Similar to Mycobacterium tuberculosis 30s ribosomal protein S10 RpsJ or RpsX or Rv0700 or mt0727 or mtcy210.19 SWALL:RS10_MYCTU (SWALL:P95048) (101 aa) fasta scores: E(): 7.7e-28%2C 70.29%25 id in 101 aa gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=TW206 TW207 TW207 rplC rplC 244074 244706 + 50S ribosomal protein L3 Similar to Escherichia coli 50s ribosomal protein L3 RplC or b3320 or z4691 or ecs4185 SWALL:RL3_ECOLI (SWALL:P02386) (209 aa) fasta scores: E(): 2.1e-32%2C 49.26%25 id in 205 aa gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=TW207 TW208 TW208 rplD rplD 244696 245442 + 50s ribosomal protein L4 Similar to Bacillus stearothermophilus 50s ribosomal protein L4 RplD SWALL:RL4_BACST (SWALL:P28601) (207 aa) fasta scores: E(): 6.1e-28%2C 41.62%25 id in 197 aa gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=TW208 TW209 TW209 rplW rplW 245439 245750 + 50s ribosomal protein L23 Similar to Mycobacterium bovis 50s ribosomal protein L23 RplW SWALL:RL23_MYCBO (SWALL:O06046) (100 aa) fasta scores: E(): 8.8e-19%2C 69.31%25 id in 88 aa%2C and to Thermus thermophilus ribosomal protein L23 SWALL:Q9RA57 (EMBL:AF094532) (96 aa) fasta scores: E(): 1.4e-11%2C 51.76%25 id in 85 aa gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=TW209 TW210 TW210 rplB rplB 245758 246591 + 50s ribosomal protein l2 Similar to Escherichia coli 50s ribosomal protein l2 RplB or b3317 or z4688 or ecs4182 SWALL:RL2_ECOLI (SWALL:P02387) (272 aa) fasta scores: E(): 6e-60%2C 56.93%25 id in 274 aa gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=TW210 TW211 TW211 rpsS rpsS 246596 246877 + 30s ribosomal protein s19 Similar to Escherichia coli 30s ribosomal protein S19 RpsS or b3316 or z4687 or ecs4181 SWALL:RS19_ECOLI (SWALL:P02375) (91 aa) fasta scores: E(): 6.9e-26%2C 67.39%25 id in 92 aa gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=TW211 TW212 TW212 rplV rplV 246877 247236 + 50s ribosomal protein l22 Similar to Escherichia coli 50s ribosomal protein L22 RplV or EryB or b3315 or z4686 or ecs4180 or stm3435 or sty4363 SWALL:RL22_ECOLI (SWALL:P02423) (110 aa) fasta scores: E(): 2.2e-13%2C 45.37%25 id in 108 aa gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=TW212 TW213 TW213 rpsC rpsC 247239 247901 + 30s ribosomal protein S3 Similar to Escherichia coli 30s ribosomal protein S3 RpsC or b3314 or z4685 or ecs4179 or stm3434 or sty4364 SWALL:RS3_ECOLI (SWALL:P02352) (232 aa) fasta scores: E(): 7.2e-36%2C 50.72%25 id in 207 aa gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=TW213 TW214 TW214 rplP rplP 247898 248329 + 50s ribosomal protein L16 Similar to Bacillus subtilis 50s ribosomal protein L16 RplP SWALL:RL16_BACSU (SWALL:P14577) (144 aa) fasta scores: E(): 2.4e-32%2C 56.61%25 id in 136 aa gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=TW214 TW215 TW215 rpmC rpmC 248316 248555 + 50s ribosomal protein L29 Similar to Escherichia coli 50s ribosomal protein L29 RpmC or b3312 or z4683 or ecs4177 SWALL:RL29_ECOLI (SWALL:P02429) (63 aa) fasta scores: E(): 0.0011%2C 40%25 id in 60 aa%2C and to Streptomyces coelicolor 50s ribosomal protein L29 RpmC or SCO4710 or SCD31.35 SWALL:RL29_STRCO (SWALL:Q9L0D2) (74 aa) fasta scores: E(): 9.1e-12%2C 54.93%25 id in 71 aa gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=TW215 TW216 TW216 rpsQ rpsQ 248552 248812 + 30S ribosomal protein S17 Similar to Escherichia coli 30s ribosomal protein S17 RpsQ or NeaA or b3311 or z4681 or ecs4176 SWALL:RS17_ECOLI (SWALL:P02373) (83 aa) fasta scores: E(): 2.3e-12%2C 49.35%25 id in 77 aa gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=TW216 TW217 TW217 rplN rplN 248910 249281 + 50s ribosomal protein L14 Similar to Bacillus stearothermophilus 50s ribosomal protein L14 RplN SWALL:RL14_BACST (SWALL:P04450) (122 aa) fasta scores: E(): 1e-30%2C 72.35%25 id in 123 aa gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=TW217 TW218 TW218 rplX rplX 249284 249625 + 50S ribosomal protein L24 Similar to Bacillus stearothermophilus 50s ribosomal protein L24 RplX SWALL:RL24_BACST (SWALL:P04455) (103 aa) fasta scores: E(): 1.9e-11%2C 42.85%25 id in 112 aa gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=TW218 TW219 TW219 rplE rplE 249622 250173 + 50S ribosomal protein L5 Similar to Escherichia coli 50s ribosomal protein L5 RplE or b3308 or z4678 or ecs4173 SWALL:RL5_ECOLI (SWALL:P02389) (178 aa) fasta scores: E(): 1.3e-37%2C 54.23%25 id in 177 aa gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=TW219 TW220 TW220 rpsH rpsH 250203 250601 + 30S ribosomal protein S8 Similar to Bacillus stearothermophilus 30s ribosomal protein S8 RpsH SWALL:RS8_BACST (SWALL:P56209) (130 aa) fasta scores: E(): 2.1e-25%2C 57.81%25 id in 128 aa gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=TW220 TW221 TW221 rplF rplF 250595 251140 + 50S ribosomal protein L6 Similar to Bacillus stearothermophilus 50s ribosomal protein L6 RplF SWALL:RL6_BACST (SWALL:P02391) (177 aa) fasta scores: E(): 1.3e-31%2C 54.8%25 id in 177 aa gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=TW221 TW222 TW222 rplR rplR 251137 251496 + 50S ribosomal protein L18 Similar to Bacillus stearothermophilus 50s ribosomal protein L18 RplR SWALL:RL18_BACST (SWALL:P09415) (120 aa) fasta scores: E(): 8.7e-20%2C 52.54%25 id in 118 aa gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=TW222 TW223 TW223 rpsE rpsE 251493 252353 + 30s ribosomal protein S5 Similar to Bacillus stearothermophilus 30s ribosomal protein S5 RpsE SWALL:RS5_BACST (SWALL:P02357) (166 aa) fasta scores: E(): 5.9e-26%2C 62.32%25 id in 146 aa. Has an unusually long N-terminal extension relative to homologues so may use a downstream alternative translational start site. gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=TW223 TW224 TW224 rplO rplO 252558 253001 + 50s ribosomal protein L15 Similar to Bacillus stearothermophilus 50s ribosomal protein L15 RplO SWALL:RL15_BACST (SWALL:P04452) (146 aa) fasta scores: E(): 3.1e-15%2C 44.75%25 id in 143 aa gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=TW224 TW225 TW225 secY secY 253023 254348 + preprotein translocase SecY subunit Similar to Streptomyces griseus preprotein translocase SecY subunit SWALL:SECY_STRGR (SWALL:Q59916) (437 aa) fasta scores: E(): 2.9e-97%2C 57.52%25 id in 445 aa gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=TW225 TW226 TW226 adk adk 254348 254908 + adenylate kinase Similar to Xanthomonas campestris adenylate kinase Adk or Xcc3291 SWALL:AAM42561 (EMBL:AE012446) (187 aa) fasta scores: E(): 3.3e-21%2C 37.96%25 id in 187 aa%2C and to Homo sapiens adenylate kinase isoenzyme 1 Ak1 SWALL:KAD1_HUMAN (SWALL:P00568) (194 aa) fasta scores: E(): 3.7e-14%2C 32.78%25 id in 183 aa gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=TW226 TW227 TW227 TW227 254911 255774 + putative aminotransferase Similar to Bacillus licheniformis D-alanine aminotransferase Dat SWALL:DAAA_BACLI (SWALL:P54692) (283 aa) fasta scores: E(): 5.1e-11%2C 29.91%25 id in 244 aa gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=TW227 TW228 TW228 infA infA 255844 256065 + translation initiation factor IF-1 Similar to Escherichia coli translation initiation factor IF-1 InfA or b0884 or z1228 or ecs0969 or stm0953 or sty0951 SWALL:IF1_ECOLI (SWALL:P02998) (71 aa) fasta scores: E(): 3.7e-16%2C 65.27%25 id in 72 aa gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=TW228 TW229 TW229 rpmJ rpmJ 256068 256187 + 50S ribosomal protein L36 Similar to Thermus thermophilus 50s ribosomal protein L36 RpmJ or Rpl36 SWALL:RL36_THETH (SWALL:P80256) (37 aa) fasta scores: E(): 3.8e-10%2C 70.27%25 id in 37 aa gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=TW229 TW230 TW230 rpsM rpsM 256222 256596 + 30S ribosomal protein S13 Similar to Synechococcus sp. 30s ribosomal protein S13 RpsM or Rps13 SWALL:RS13_SYNP6 (SWALL:O24708) (125 aa) fasta scores: E(): 6.5e-27%2C 61.78%25 id in 123 aa gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=TW230 TW231 TW231 rpsK rpsK 256600 256992 + 30S ribosomal protein S11 Similar to Escherichia coli 30s ribosomal protein S11 RpsK or b3297 or z4667 or ecs4162 SWALL:RS11_ECOLI (SWALL:P02366) (128 aa) fasta scores: E(): 7.1e-26%2C 56.69%25 id in 127 aa gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=TW231 TW232 TW232 rpoA rpoA 257011 257994 + DNA-directed RNA polymerase alpha chain Similar to Streptomyces coelicolor DNA-directed RNA polymerase alpha chain RpoA or SCO4729 or SC6G4.07 SWALL:RPOA_STRCO (SWALL:P72404) (340 aa) fasta scores: E(): 9.7e-75%2C 63.91%25 id in 327 aa gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=TW232 TW233 TW233 rplQ rplQ 258010 258549 + 50S ribosomal protein L17 Similar to Bacillus stearothermophilus 50s ribosomal protein L17 RplQ SWALL:RL17_BACST (SWALL:P07843) (119 aa) fasta scores: E(): 3.8e-13%2C 47.7%25 id in 109 aa gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=TW233 TW234 TW234 truA truA 258575 259378 + tRNA pseudouridine synthase A Similar to Escherichia coli tRNA pseudouridine synthase A TruA or HisT or AsuC or LeuK or b2318 SWALL:TRUA_ECOLI (SWALL:P07649) (270 aa) fasta scores: E(): 5.1e-18%2C 32.27%25 id in 251 aa%2C and to Streptomyces coelicolor tRNA pseudouridine synthase A TruA or SCO4731 or SC6G4.09 SWALL:TRUA_STRCO (SWALL:O86776) (284 aa) fasta scores: E(): 4.5e-34%2C 40.59%25 id in 271 aa gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=TW234 TW235 TW235 TW235 259491 260606 - putative MRP-family ATP-binding protein Similar to Mycobacterium tuberculosis Mrp protein homolog or rv1229c or mt1267 or mtci61.12c or mtv006.01C SWALL:MRP_MYCTU (SWALL:O33225) (381 aa) fasta scores: E(): 1.2e-45%2C 43.83%25 id in 365 aa gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=TW235 TW236 TW236 TW236 260614 261108 - conserved hypothetical membrane protein Similar to Mycobacterium tuberculosis hypothetical protein Rv1231c or mtv006.03c or mt1269 SWALL:O86314 (EMBL:Z98260) (180 aa) fasta scores: E(): 1.4e-09%2C 39.25%25 id in 135 aa gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=TW236 TW237 TW237 TW237 261095 262342 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5154 or SCP8.17c SWALL:Q9FBK4 (EMBL:AL390975) (433 aa) fasta scores: E(): 6.5e-37%2C 38.06%25 id in 423 aa gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=TW237 TW238 TW238 TW238 262339 263508 - Xaa-Pro aminopeptidase Similar to Streptomyces coelicolor Xaa-Pro aminopeptidase I PepP1 or SCO3970 or SCBAC25e3.07c SWALL:AMP1_STRCO (SWALL:Q05813) (490 aa) fasta scores: E(): 6.8e-55%2C 43.76%25 id in 409 aa%2C and to Escherichia coli Xaa-Pro aminopeptidase PepP or b2908 SWALL:AMPP_ECOLI (SWALL:P15034) (440 aa) fasta scores: E(): 1.9e-26%2C 35.63%25 id in 275 aa gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=TW238 TW240 TW240 TW240 263951 264562 + hypothetical protein No significant database matches gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=TW240 TW241 TW241 TW241 264653 264874 - conserved hypothetical protein Similar to Corynebacterium glutamicum hypothetical protein Cgl0772 SWALL:BAB98165 (EMBL:AP005276) (75 aa) fasta scores: E(): 0.0016%2C 34.72%25 id in 72 aa%3B~No significant database matches gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=TW241 TW242 TW242 TW242 264900 267881 + putative ATP-dependent DNA helicase subunit Similar to Streptomyces coelicolor putative ATP-dependent DNA helicase SCO5183 or 2SC3B6.07 SWALL:Q9FCK5 (EMBL:AL390968) (1159 aa) fasta scores: E(): 2.7e-07%2C 24.49%25 id in 1139 aa gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=TW242 TW243 TW243 TW243 267878 270799 + putative ATP-dependent DNA helicase subunit Similar to Streptomyces coelicolor putative ATP-dependent DNA helicase SCO5184 or 2SC3B6.08 SWALL:Q9FCK4 (EMBL:AL390968) (1222 aa) fasta scores: E(): 9.9e-16%2C 26.61%25 id in 1161 aa%2C and to Escherichia coli DNA helicase II UvrB or MutU or PdeB or Rad or Recl or b3813 SWALL:UVRD_ECOLI (SWALL:P03018) (720 aa) fasta scores: E(): 2.8e-09%2C 24.25%25 id in 800 aa gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=TW243 TW244 TW244 TW244 270823 271998 - putative transferase Weakly similar to Escherichia coli macrolide 2'-phosphotransferase I MphA SWALL:Q47396 (EMBL:D16251) (301 aa) fasta scores: E(): 1.4e-07%2C 26.1%25 id in 226 aa gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=TW244 TW245 TW245 TW245 272079 273836 + putative ATP-dependent DNA helicase Similar to Streptomyces coelicolor putative ATP-dependent DNA helicase SCO5188 or 2SC3B6.12 SWALL:Q9FCK0 (EMBL:AL390968) (785 aa) fasta scores: E(): 2.7e-40%2C 35.14%25 id in 606 aa%2C and to Escherichia coli DNA helicase II UvrD or MutU or PdeB or Rad or Recl or b3813 SWALL:UVRD_ECOLI (SWALL:P03018) (720 aa) fasta scores: E(): 1.5e-19%2C 25.47%25 id in 636 aa gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=TW245 TW246 TW246 TW246 273875 275149 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5199 or 2SC3B6.23c SWALL:Q9FCI9 (EMBL:AL390968) (487 aa) fasta scores: E(): 1.7e-38%2C 32.7%25 id in 425 aa gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=TW246 TW247 TW247 ftsZ ftsZ 275690 276775 + cell division protein FtsZ Similar to Streptomyces coelicolor cell division protein FtsZ or SCO2082 or SC4A10.15c SWALL:FTSZ_STRCO (SWALL:P45500) (399 aa) fasta scores: E(): 4.9e-88%2C 77.28%25 id in 339 aa gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=TW247 TW248 TW248 TW248 276892 277263 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO1749 or 2SCI34.02 SWALL:Q9EWX7 (EMBL:AL445403) (146 aa) fasta scores: E(): 3.5e-07%2C 35.33%25 id in 133 aa gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=TW248 TW249 TW249 TW249 277348 277875 + putative cell division protein Similar to Bacillus subtilis minicell-associated protein DivIVA SWALL:P71021 (EMBL:U60901) (164 aa) fasta scores: E(): 0.031%2C 27.32%25 id in 161 aa gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=TW249 TW250 TW250 lspA lspA 277872 278324 + lipoprotein signal peptidase Similar to Staphylococcus aureus lipoprotein signal peptidase LspA or Lsp SWALL:LSPA_STAAU (SWALL:P31024) (163 aa) fasta scores: E(): 1.9e-07%2C 35.82%25 id in 134 aa%2C and to Bacillus halodurans lipoprotein signal peptidase LspA or Lsp or bh2543 SWALL:LSPA_BACHD (SWALL:Q9K9V2) (156 aa) fasta scores: E(): 3.5e-09%2C 36.48%25 id in 148 aa gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=TW250 TW251 TW251 TW251 278405 279316 + putative pseudouridine synthase Similar to Streptomyces coelicolor putative ribosomal large subunit pseudouridine synthase SCO2073 or SC4A10.06c SWALL:Q9S2X8 (EMBL:AL109663) (314 aa) fasta scores: E(): 2.5e-42%2C 49.55%25 id in 224 aa gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=TW251 TW252 TW252 dnaE dnaE 279326 282820 + DNA polymerase III alpha subunit Similar to Escherichia coli DNA polymerase III alpha subunit DnaE or PolC or b0184 SWALL:DP3A_ECOLI (SWALL:P10443) (1160 aa) fasta scores: E(): 2.8e-112%2C 36.11%25 id in 1188 aa gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=TW252 TW253 TW253 TW253 283033 283935 + conserved integral membrane protein. Similar to Streptomyces coelicolor putative integral membrane protein SCO0892 or SCM1.25c SWALL:Q9RD18 (EMBL:AL133422) (316 aa) fasta scores: E(): 8.5e-37%2C 42.12%25 id in 292 aa gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=TW253 TW254 TW254 murA murA 283980 285305 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase Similar to Bacillus subtilis UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 MurAa or MurA SWALL:MUA1_BACSU (SWALL:P70965) (436 aa) fasta scores: E(): 3.9e-41%2C 35.94%25 id in 434 aa%2C and to Streptomyces coelicolor UDP-N-acetylglucosamine transferase MurA or SCO2949 or SCE59.08 SWALL:Q9L1U5 (EMBL:AL138851) (448 aa) fasta scores: E(): 5e-102%2C 58.73%25 id in 441 aa gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=TW254 TW255 TW255 TW255 285371 286027 + conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical 27.0 kDa protein Rv2182c or mtv021.15c or mt2237 SWALL:O53516 (EMBL:AL021957) (247 aa) fasta scores: E(): 6.9e-07%2C 26.92%25 id in 208 aa gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=TW255 TW256 TW256 gpsA gpsA 286002 286979 + glycerol-3-phosphate dehydrogenase Similar to Bacillus subtilis glycerol-3-phosphate dehydrogenase GpsA or GlyC SWALL:GPDA_BACSU (SWALL:P46919) (345 aa) fasta scores: E(): 1.2e-31%2C 36.94%25 id in 314 aa%2C and to Streptomyces coelicolor glycerol-3-phosphate dehydrogenase GpsA or SCO5559 or SC7A1.03 SWALL:GPDA_STRCO (SWALL:Q9ZBS0) (336 aa) fasta scores: E(): 1.6e-39%2C 43.59%25 id in 312 aa gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=TW256 TW257 TW257 ddlA ddlA 286979 288022 + D-alanine--D-alanine ligase A Similar to Escherichia coli%2C and Escherichia coli O157:H7 D-alanine--D-alanine ligase A DdlA or b0381 or z0477 or ecs0431 SWALL:DDLA_ECOLI (SWALL:P23844) (364 aa) fasta scores: E(): 5.1e-32%2C 32.86%25 id in 353 aa gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=TW257 TW258 TW258 TW258 288036 288500 - conserved hypothetical lipoprotein Weakly similar to Streptomyces coelicolor hypothetical protein SCO3628 or SCH10.06c SWALL:Q9X8P5 (EMBL:AL049754) (163 aa) fasta scores: E(): 3.8e-07%2C 32.79%25 id in 125 aa gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=TW258 TW259 TW259 TW259 288527 289912 - putative lipoamide acyltransferase Similar to Bacillus subtilis lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex BfmB SWALL:ODB2_BACSU (SWALL:P37942) (424 aa) fasta scores: E(): 1.6e-33%2C 34.64%25 id in 459 aa%2C and to Streptomyces seoulensis dihydrolipoamide acetyltransferase PdhB SWALL:Q9Z6I4 (EMBL:AF047034) (612 aa) fasta scores: E(): 1.3e-48%2C 41.3%25 id in 477 aa gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=TW259 TW260 TW260 acoL acoL 290066 291418 - dihydrolipoamide dehydrogenase Similar to Bacillus subtilis dihydrolipoamide dehydrogenase AcoL SWALL:DLD3_BACSU (SWALL:O34324) (458 aa) fasta scores: E(): 2.9e-46%2C 35.07%25 id in 459 aa gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=TW260 TW261 TW261 TW261 291425 292933 - putative aminopeptidase Similar to Rickettsia prowazekii cytosol aminopeptidase PepA or Rp142 SWALL:AMPA_RICPR (SWALL:P27888) (500 aa) fasta scores: E(): 5.4e-43%2C 35.72%25 id in 459 aa gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=TW261 TW262 TW262 glyQS glyQS 293012 296086 - glycyl-tRNA synthetase Similar to Chlamydia pneumoniae glycyl-tRNA synthetase GlyQS or GlyQ or cpn0946 or cp0913 SWALL:SYG_CHLPN (SWALL:Q9Z6W0) (1010 aa) fasta scores: E(): 8.9e-78%2C 30.52%25 id in 1055 aa%2C and to Arabidopsis thaliana aminoacyl-t-RNA synthetase precursor Edd1 SWALL:O23150 (EMBL:AJ003069) (1067 aa) fasta scores: E(): 1.1e-100%2C 39.47%25 id in 1021 aa gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=TW262 TW263 TW263 hrdB hrdB 296144 297307 + RNA polymerase principal sigma factor hrdb Similar to Streptomyces coelicolor RNA polymerase principal sigma factor HrdB or SCO5820 or SC5B8.10 SWALL:HRDB_STRCO (SWALL:P18183) (511 aa) fasta scores: E(): 2.2e-90%2C 68.31%25 id in 385 aa gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=TW263 TW264 TW264 TW264 297309 298694 + conserved hypothetical protein (possible murein ligase) Similar to Mycobacterium tuberculosis hypothetical 43.4 kDa protein Rv3712 or mtv025.060 or mt3815 SWALL:O69679 (EMBL:AL022121) (413 aa) fasta scores: E(): 1.4e-18%2C 31.18%25 id in 388 aa. Weak similarity to murein ligases. gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=TW264 TW265 TW265 TW265 298685 299464 + conserved hypothetical protein Weakly similar to many eg. Staphylococcus aureus hypothetical protein sav1891 sav1891 or sa1707 or mw1832 SWALL:Q99SZ5 (EMBL:AP003363) (243 aa) fasta scores: E(): 9e-10%2C 25.12%25 id in 203 aa gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=TW265 TW266 TW266 alr1 alr1 299448 300608 - alanine racemase I Provides the d-alanine required for cell wall biosynthesis. Similar to Streptomyces coelicolor alanine racemase Alr or SCO4745 or SC6G4.23 SWALL:ALR_STRCO (SWALL:O86786) (391 aa) fasta scores: E(): 1.2e-19%2C 29.5%25 id in 400 aa%2C and to Lactobacillus plantarum alanine racemase Alr SWALL:ALR_LACPL (SWALL:O08445) (375 aa) fasta scores: E(): 0.0001%2C 24.13%25 id in 377 aa gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=TW266 TW267 TW267 alr2 alr2 300658 301320 - alanine racemase II Provides the d-alanine required for cell wall biosynthesis. Similar to the C-terminal region of alanine racemases eg. Corynebacterium glutamicum alanine racemase Alr or cgl0588 SWALL:BAB97981 (EMBL:AY077456) (361 aa) fasta scores: E(): 1.8e-07%2C 34.82%25 id in 112 aa. gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=TW267 TW268 TW268 gyrB2 gyrB2 301377 303365 + DNA gyrase subunit B Similar to Streptomyces sphaeroides DNA gyrase subunit B%2C novobiocin-sensitive GyrBS SWALL:GYBS_STRSH (SWALL:P50075) (684 aa) fasta scores: E(): 1.7e-98%2C 43%25 id in 665 aa gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=TW268 TW269 TW269 ptrB ptrB 303376 305618 - protease ii Pseudogene. Similar to Escherichia coli protease II PtrB or Tlp or b1845 SWALL:PTRB_ECOLI (SWALL:P24555) (686 aa) fasta scores: E(): 9.4e-45%2C 30.41%25 id in 720 aa%2C and to Moraxella lacunata protease II PtrB SWALL:PTRB_MORLA (SWALL:Q59536) (690 aa) fasta scores: E(): 1.2e-52%2C 33.6%25 id in 729 aa pseudogene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=TW269 TW272 TW272 gnd gnd 305928 307358 + 6-phosphogluconate dehydrogenase%2C decarboxylating Similar to Escherichia coli 6-phosphogluconate dehydrogenase%2C decarboxylating Gnd or b2029 SWALL:6PGD_ECOLI (SWALL:P00350) (468 aa) fasta scores: E(): 1.8e-86%2C 49.57%25 id in 468 aa gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=TW272 TW273 TW273 gyrA1 gyrA1 307631 310096 - DNA gyrase subunit A Similar to Clostridium acetobutylicum DNA gyrase subunit A GyrA or cac0007 SWALL:GYRA_CLOAB (SWALL:P94605) (830 aa) fasta scores: E(): 7.6e-93%2C 36.54%25 id in 799 aa gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=TW273 TW274 TW274 TW274 310102 311025 - conserved DNA-binding protein Similar to Streptomyces coelicolor hypothetical protein SCO5855 or SC9B10.22c SWALL:O50529 (EMBL:AL009204) (352 aa) fasta scores: E(): 0.00048%2C 28.57%25 id in 350 aa gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=TW274 TW275 TW275 TW275 311166 311444 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5864 or SC2E9.05 SWALL:O54130 (EMBL:AL021530) (98 aa) fasta scores: E(): 8.6e-13%2C 49.48%25 id in 97 aa gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=TW275 TW276 TW276 TW276 311511 311978 - putative membrane protein Similar to Mycobacterium leprae u1764i ml1027 putative membrane protein SWALL:Q49991 (EMBL:U15181) (157 aa) fasta scores: E(): 2.4e-10%2C 33.76%25 id in 154 aa gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=TW276 TW277 TW277 dut dut 312051 312491 + deoxyuridine 5'-triphosphate nucleotidohydrolase Similar to Streptomyces coelicolor deoxyuridine 5'-triphosphate nucleotidohydrolase Dut or SCO5868 or SC2E9.09 SWALL:DUT_STRCO (SWALL:O54134) (183 aa) fasta scores: E(): 5.6e-21%2C 50%25 id in 130 aa gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=TW277 TW278 TW278 TW278 312484 313059 + conserved hypothetical protein Weak and partial similarity to Streptomyces coelicolor hypothetical protein SCO5869 or SC2E9.10 SWALL:O54135 (EMBL:AL021530) (250 aa) fasta scores: E(): 2.5e-19%2C 40%25 id in 175 aa gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=TW278 TW279 TW279 TW279 313063 313719 + putative integral membrane protein Similar to Streptomyces coelicolor hypothetical protein sSCO5874 or SC2E9.15 SWALL:O54140 (EMBL:AL021530) (272 aa) fasta scores: E(): 7.4e-13%2C 28.72%25 id in 188 aa gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=TW279 TW280 TW280 Dxs Dxs 313747 315636 + 1-deoxy-D-xylulose 5-phosphate synthase Similar to Streptomyces sp. 1-deoxy-D-xylulose 5-phosphate synthase Dxs SWALL:DXS_STRC1 (SWALL:Q9RBN6) (631 aa) fasta scores: E(): 3.4e-117%2C 49.75%25 id in 621 aa gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=TW280 TW281 TW281 tig tig 316355 317668 + trigger factor Similar to Escherichia coli trigger factor Tig or b0436 or z0541 or ecs0490 SWALL:TIG_ECOLI (SWALL:P22257) (432 aa) fasta scores: E(): 2.8e-12%2C 25.55%25 id in 407 aa%2C and to Streptomyces coelicolor trigger factor Tig or SCO2620 or SCC80.05c SWALL:Q9F314 (EMBL:AL442143) (468 aa) fasta scores: E(): 6.4e-24%2C 30.9%25 id in 453 aa gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=TW281 TW282 TW282 TW282 317665 318867 + putative integral membrane protein No significant database matches gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=TW282 TW283 TW283 clpP1 clpP1 318864 319406 + ATP-dependent Clp protease proteolytic subunit 1 Similar to Streptomyces coelicolor ATP-dependent Clp protease proteolytic subunit 1 ClpP1 or SCO2619 or SCC80.04c SWALL:CLP1_STRCO (SWALL:Q9F315) (219 aa) fasta scores: E(): 5.1e-39%2C 58.82%25 id in 170 aa gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=TW283 TW284 TW284 clpP2 clpP2 319418 320041 + ATP dependent Clp protease proteolytic subunit 2 Similar to Streptomyces coelicolor ATP-dependent Clp protease proteolytic subunit 2 ClpP2 or SCO2618 or SCC80.03c SWALL:CLP2_STRCO (SWALL:Q9ZH58) (218 aa) fasta scores: E(): 3e-48%2C 67%25 id in 197 aa gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=TW284 TW285 TW285 clpX clpX 320051 321322 + ATP dependent Clp Protease ATP binding subunit Similar to Bacillus subtilis ATP-dependent Clp protease ATP-binding subunit ClpX SWALL:CLPX_BACSU (SWALL:P50866) (420 aa) fasta scores: E(): 6.7e-66%2C 56.89%25 id in 406 aa gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=TW285 TW286 TW286 TW286 321314 323884 - class I tRNA synthetase (I%2C L%2C M and V) Similar to Rickettsia conorii valyl-tRNA synthetase ValS or rc1053 SWALL:Q92GR9 (EMBL:AE008656) (812 aa) fasta scores: E(): 3.5e-56%2C 39.75%25 id in 825 aa%2C and to Thermotoga maritima isoleucyl-tRNA synthetase IleS or tm1361 SWALL:SYI_THEMA (SWALL:P46213) (919 aa) fasta scores: E(): 2.7e-24%2C 24.4%25 id in 881 aa gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=TW286 TW287 TW287 TW287 324081 327251 + class I tRNA synthetase (I%2C L%2C M and V) Similar to Mycobacterium tuberculosis isoleucyl-tRNA synthetase IleS or Rv1536 or mt1587 or mtcy48.29C SWALL:SYI_MYCTU (SWALL:Q10765) (1041 aa) fasta scores: E(): 0%2C 52.58%25 id in 1046 aa%2C and to Methanosarcina barkeri isoleucyl-tRNA synthetase IleS SWALL:Q9P9L9 (EMBL:AF208389) (1058 aa) fasta scores: E(): 3.3e-65%2C 30.23%25 id in 1065 aa gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=TW287 TW288 TW288 fgs fgs 327361 328722 + folylpolyglutamate synthase Similar to Lactobacillus casei folylpolyglutamate synthase Fgs SWALL:FOLC_LACCA (SWALL:P15925) (428 aa) fasta scores: E(): 6.4e-22%2C 33.23%25 id in 343 aa%2C and to Corynebacterium glutamicum folylpolyglutamate synthase cgl2375 SWALL:BAB99768 (EMBL:AP005281) (458 aa) fasta scores: E(): 5.6e-47%2C 37.14%25 id in 455 aa gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=TW288 TW289 TW289 TW289 328727 329056 + putative membrane protein Similar to Streptomyces coelicolor putative membrane protein SCO2613 or SCC88.24c SWALL:Q9L1G5 (EMBL:AL139298) (118 aa) fasta scores: E(): 0.83%2C 28.84%25 id in 104 aa gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=TW289 TW290 TW290 ndk ndk 329121 329531 + nucleoside diphosphate kinase Similar to Streptomyces coelicolor nucleoside diphosphate kinase Ndk or SCO2612 or SCC88.23c SWALL:NDK_STRCO (SWALL:P50589) (137 aa) fasta scores: E(): 5.6e-23%2C 48.52%25 id in 136 aa%2C and to Dictyostelium discoideum nucleoside diphosphate kinase%2C cytosolic NdkB or NdkC or Gip17 SWALL:NDKC_DICDI (SWALL:P22887) (155 aa) fasta scores: E(): 3e-24%2C 48.5%25 id in 134 aa gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=TW290 TW291 TW291 rne rne 329749 331398 + ribonuclease E Similar to Escherichia coli ribonuclease E Rne or Ams or Hmp1 or b1084 SWALL:RNE_ECOLI (SWALL:P21513) (1061 aa) fasta scores: E(): 9.7e-38%2C 36.25%25 id in 411 aa%2C and to Streptomyces coelicolor hypothetical protein SCO2599 or SCC88.10c SWALL:Q9L1H8 (EMBL:AL139298) (1340 aa) fasta scores: E(): 1.6e-58%2C 44.28%25 id in 560 aa gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=TW291 TW292 TW292 rplU rplU 331522 331836 + 50s ribosomal protein L21 Similar to Mycobacterium tuberculosis 50s ribosomal protein L21 RplU or Rv2442c or mt2518 or mtcy428.04 SWALL:RL21_MYCTU (SWALL:P71907) (104 aa) fasta scores: E(): 9.8e-15%2C 50.5%25 id in 99 aa%2C and to Escherichia coli 50s ribosomal protein L21 RplU or b3186 or z4549 or ecs4065 SWALL:RL21_ECOLI (SWALL:P02422) (103 aa) fasta scores: E(): 0.00059%2C 29.7%25 id in 101 aa gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=TW292 TW293 TW293 rpmA rpmA 331877 332125 + 50s ribosomal protein L27 Similar to Escherichia coli 50s ribosomal protein l27 RpmA or b3185 or z4547 or ecs4064 SWALL:RL27_ECOLI (SWALL:P02427) (84 aa) fasta scores: E(): 1.5e-15%2C 59.75%25 id in 82 aa gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=TW293 TW294 TW294 obg obg 332125 333462 + GTP-binding protein Similar to Streptomyces coelicolor Obg or SCO2595 or SCC88.06c SWALL:P95722 (EMBL:D87915) (478 aa) fasta scores: E(): 9.7e-75%2C 50.34%25 id in 441 aa gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=TW294 TW295 TW295 TW295 333528 333767 + putative membrane protein No significant database matches gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=TW295 TW296 TW296 nadD nadD 333790 334350 + nicotinate-nucleotide adenylyltransferase Similar to Escherichia coli nicotinate-nucleotide adenylyltransferase NadD or b0639 SWALL:NADD_ECOLI (SWALL:P52085) (213 aa) fasta scores: E(): 1e-11%2C 32.19%25 id in 205 aa%2C and to Streptomyces coelicolor probable nicotinate-nucleotide adenylyltransferase NadD or SCO2579 or SCC123.17c SWALL:NADD_STRCO (SWALL:Q9RDK7) (188 aa) fasta scores: E(): 2.1e-46%2C 62.36%25 id in 186 aa gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=TW296 TW297 TW297 TW297 334343 335269 + putative membrane protein No significant database matches gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=TW297 TW298 TW298 TW298 335653 336300 + conserved hypothetical protein C-terminal portion similar to that of Corynebacterium glutamicum hypothetical protein Cgl1342 cgl1342 SWALL:BAB98735 (EMBL:AP005278) (285 aa) fasta scores: E(): 2.1e-09%2C 40%25 id in 120 aa gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=TW298 TW299 TW299 TW299 336318 337370 + putative integral membrane protein (possible nuclease activity) Similar to Streptococcus pneumoniae R6 hypothetical 37.7 kDa protein spr0510 SWALL:AAK99314 (EMBL:AE008430) (333 aa) fasta scores: E(): 4.6e-13%2C 26.08%25 id in 322 aa gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=TW299 TW300 TW300 TW300 337674 338228 - putative DNA-binding/repair enzyme Similar to Bacillus subtilis methylated-DNA--protein-cysteine methyltransferase Ogt or Dat or Dat1 SWALL:OGT_BACSU (SWALL:P11742) (165 aa) fasta scores: E(): 4.4e-12%2C 44.62%25 id in 121 aa gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=TW300 TW301 TW301 lipA lipA 338230 339285 - lipoic acid synthetase Similar to Streptomyces coelicolor lipoic acid synthetase LipA or SCO2194 or SC5F7.07 or SC3H12.02 SWALL:LIPA_STRCO (SWALL:Q9S2P2) (317 aa) fasta scores: E(): 4.3e-85%2C 68.59%25 id in 312 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 lipoic acid synthetase LipA or Lip or b0628 or z0773 or ecs0666 SWALL:LIPA_ECOLI (SWALL:P25845) (321 aa) fasta scores: E(): 4.9e-43%2C 41.31%25 id in 305 aa gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=TW301 TW302 TW302 lipB lipB 339304 339981 - lipoate-protein ligase B Similar to Escherichia coli lipoate-protein ligase B LipB or b0630 SWALL:LIPB_ECOLI (SWALL:P30976) (213 aa) fasta scores: E(): 2.4e-13%2C 30.08%25 id in 226 aa%2C and to Mycobacterium tuberculosis lipoate-protein ligase B LipB or Rv2217 or mt2274 or mtcy190.28 SWALL:LIPB_MYCTU (SWALL:Q10404) (230 aa) fasta scores: E(): 6.1e-32%2C 48.24%25 id in 199 aa gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=TW302 TW303 TW303 ffh ffh 340094 341434 + signal recognition particle protein Similar to Escherichia coli signal recognition particle protein Ffh or b2610 or z3904 or ecs3473 SWALL:SR54_ECOLI (SWALL:P07019) (453 aa) fasta scores: E(): 1.1e-33%2C 34.89%25 id in 447 aa gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=TW303 TW304 TW304 rpsP rpsP 341630 342076 + 30s ribosomal protein S16 Similar to Bacillus subtilis 30s ribosomal protein S16 RpsP SWALL:RS16_BACSU (SWALL:P21474) (89 aa) fasta scores: E(): 1.9e-10%2C 52.43%25 id in 82 aa%2C and to Streptomyces coelicolor 30s ribosomal protein S16 RpsP or SCO5591 or SC2E1.08 SWALL:RS16_STRCO (SWALL:O69879) (139 aa) fasta scores: E(): 6.5e-19%2C 53.78%25 id in 119 aa gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=TW304 TW305 TW305 TW305 342073 342303 + conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2908c or mt2976 or mtcy274.40C SWALL:YT08_MYCTU (SWALL:Q10826) (80 aa) fasta scores: E(): 1.4e-07%2C 46.91%25 id in 81 aa gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=TW305 TW306 TW306 rimM rimM 342303 342851 + probable 16s rRNA processing protein RimM Similar to Mycobacterium tuberculosis probable 16s rRNA processing protein RimM or Rv2907c or mt2975 or mtcy274.38C SWALL:RIMM_MYCTU (SWALL:Q10824) (176 aa) fasta scores: E(): 1.5e-10%2C 30.72%25 id in 179 aa gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=TW306 TW307 TW307 trmD trmD 342884 343588 + tRNA (guanine-N1)-methyltransferase Similar to Escherichia coli tRNA (guanine-N1)-methyltransferase TrmB or b2607 or z3901 or ecs3470 SWALL:TRMD_ECOLI (SWALL:P07020) (255 aa) fasta scores: E(): 4.3e-30%2C 42.29%25 id in 227 aa%2C and to Mycobacterium tuberculosis tRNA (guanine-N1)-methyltransferase TrmB or rv2906c or mt2974 or mtcy274.37C SWALL:TRMD_MYCTU (SWALL:Q10797) (230 aa) fasta scores: E(): 7.9e-41%2C 49.55%25 id in 226 aa gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=TW307 TW308 TW308 rplS rplS 343681 344028 + 50s ribosomal protein L19 Similar to Escherichia coli 50s ribosomal protein L19 RplS or b2606 or z3900 or ecs3469 SWALL:RL19_ECOLI (SWALL:P02420) (114 aa) fasta scores: E(): 4.3e-18%2C 50.94%25 id in 106 aa gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=TW308 TW309 TW309 sipS sipS 344025 344717 + signal peptidase I Similar to Bacillus subtilis signal peptidase I SipS SWALL:LEPS_BACSU (SWALL:P28628) (184 aa) fasta scores: E(): 1.5e-06%2C 29.64%25 id in 199 aa%2C and to Streptomyces lividans signal peptidase I sipX SWALL:O86869 (EMBL:Z86111) (320 aa) fasta scores: E(): 8.4e-30%2C 46%25 id in 213 aa gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=TW309 TW311 TW311 TW311 344979 345098 + hypothetical protein Doubtful CDS. No significant database matches gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=TW311 TW312 TW312 TW312 345350 345712 + conserved hypothetical protein Similar to Thermotoga maritima hypothetical protein Tm0253 SWALL:Y253_THEMA (SWALL:Q9WY95) (108 aa) fasta scores: E(): 9.1e-09%2C 41.5%25 id in 106 aa gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=TW312 TW313 TW313 TW313 345709 347244 + conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2897c or mt2965 or mtcy274.28C SWALL:YS97_MYCTU (SWALL:Q10818) (503 aa) fasta scores: E(): 1.9e-61%2C 43.77%25 id in 514 aa gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=TW313 TW314 TW314 TW314 347316 348461 + putative DNA processing protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2896c or mt2964 or mtcy274.27C SWALL:YS96_MYCTU (SWALL:Q10817) (389 aa) fasta scores: E(): 9.6e-28%2C 40.07%25 id in 272 aa%2C and to Haemophilus influenzae Smf protein or DprA or hi0985 SWALL:SMF_HAEIN (SWALL:P43862) (373 aa) fasta scores: E(): 8e-16%2C 30.63%25 id in 284 aa gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=TW314 TW315 TW315 TW315 348498 349418 + putative DNA recombinase Similar to Mycobacterium tuberculosis probable integrase/recombinase XerC or Rv2894c or mt2962 or mtcy274.25C SWALL:XERC_MYCTU (SWALL:Q10815) (298 aa) fasta scores: E(): 2.2e-35%2C 43.18%25 id in 301 aa%2C and to Pseudomonas fluorescens Sss/XerC protein SWALL:O05324 (EMBL:Y12268) (299 aa) fasta scores: E(): 4.6e-29%2C 36.11%25 id in 288 aa gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=TW315 TW316 TW316 TW316 349918 350202 + hypothetical protein Doubtful CDS. No significant database matches gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=TW316 TW317 TW317 TW317 350217 350912 - hypothetical protein No significant database matches gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=TW317 TW318 TW318 rpsB rpsB 351125 351988 + 30s ribosomal protein S2 Similar to Streptomyces coelicolor 30s ribosomal protein S2 RpsB or SCO5624 or SC2E1.41 SWALL:RS2_STRCO (SWALL:O31212) (310 aa) fasta scores: E(): 1.5e-50%2C 51.56%25 id in 287 aa%2C and to Spirulina platensis 30s ribosomal protein s2 rpsB SWALL:RS2_SPIPL (SWALL:P34831) (251 aa) fasta scores: E(): 1.1e-39%2C 45.71%25 id in 245 aa gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=TW318 TW319 TW319 tsf tsf 352019 352840 + elongation factor Ts Similar to Streptomyces coelicolor elongation factor Ts Tsf or SCO5625 or SC2E1.42 SWALL:EFTS_STRCO (SWALL:O31213) (278 aa) fasta scores: E(): 3e-39%2C 45.48%25 id in 277 aa gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=TW319 TW320 TW320 pyrH pyrH 352851 353546 + uridylate kinase Similar to Escherichia coli uridylate kinase PyrH or SmbA or b0171 or z0182 or ecs0173 SWALL:PYRH_ECOLI (SWALL:P29464) (240 aa) fasta scores: E(): 1.2e-29%2C 44.63%25 id in 233 aa%2C and to Streptomyces coelicolor uridylate kinase PyrH or SCO5626 or SC2E1.43 SWALL:O69913 (EMBL:AL023797) (253 aa) fasta scores: E(): 1.5e-46%2C 61.3%25 id in 230 aa gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=TW320 TW321 TW321 frr frr 353710 354255 + ribosome recycling factor Similar to Pseudomonas aeruginosa ribosome recycling factor Frr or pa3653 SWALL:RRF_PSEAE (SWALL:O82853) (185 aa) fasta scores: E(): 9.4e-15%2C 35.59%25 id in 177 aa%2C and to Streptomyces coelicolor ribosome recycling factor Frr or SCO5627 or SC6A9.40C SWALL:RRF_STRCO (SWALL:O86770) (185 aa) fasta scores: E(): 2.1e-21%2C 42.45%25 id in 179 aa gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=TW321 TW322 TW322 TW322 354324 355133 + putative integral membrane phospholipid biosynthetic nucleotidyltransferase Similar to Streptomyces coelicolor putative integral membrane protein SCO5628 or SC6A9.39C SWALL:O86769 (EMBL:AL031035) (391 aa) fasta scores: E(): 1.7e-18%2C 35.44%25 id in 268 aa%2C and to Escherichia coli phosphatidate cytidylyltransferase CdsA or Cds or b0175 or z0186 or ecs0177 SWALL:CDSA_ECOLI (SWALL:P06466) (249 aa) fasta scores: E(): 1.5e-15%2C 33.85%25 id in 192 aa gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=TW322 TW323 TW323 xthA1 xthA1 355281 356120 + exodeoxyribonuclease III Similar to Escherichia coli exodeoxyribonuclease III XthA or Xth or b1749 SWALL:EX3_ECOLI (SWALL:P09030) (268 aa) fasta scores: E(): 6.8e-14%2C 28.96%25 id in 290 aa%2C and to Streptomyces coelicolor putative exonuclease SCO6341 or SC3A7.09 SWALL:O86610 (EMBL:AL031155) (259 aa) fasta scores: E(): 6.4e-24%2C 40.07%25 id in 272 aa gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=TW323 TW324 TW324 TW324 356139 356681 + hypothetical protein No significant database matches gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=TW324 TW325 TW325 TW325 356911 357549 - putative secreted protein Similar to Streptomyces coelicolor putative secreted protein SCO5029 or SCK7.02 SWALL:Q9FBP7 (EMBL:AL391754) (238 aa) fasta scores: E(): 1.2e-14%2C 47.36%25 id in 114 aa gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=TW325 TW327 TW327 groEL groEL 357802 359424 + 60 kDa chaperonin Similar to Tropheryma whipplei 60 kDa chaperonin groL or groEL SWALL:CH60_TROWH (SWALL:Q9KJC0) (540 aa) fasta scores: E(): 4.7e-183%2C 99.81%25 id in 540 aa%2C and to Streptomyces albus G 60 kDa chaperonin 2 GroL2 or GroEL2 SWALL:CH62_STRAL (SWALL:Q00768) (539 aa) fasta scores: E(): 1.1e-139%2C 75.37%25 id in 540 aa gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=TW327 TW328 TW328 TW328 359486 360241 - putative integral membrane protein No significant database matches gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=TW328 TW329 TW329 hom hom 360443 361912 + homoserine dehydrogenase Similar to Corynebacterium glutamicum homoserine dehydrogenase Hom or ThrA or cgl1183 SWALL:DHOM_CORGL (SWALL:P08499) (445 aa) fasta scores: E(): 6.7e-54%2C 43.56%25 id in 443 aa gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=TW329 TW330 TW330 thrC thrC 361919 362971 + threonine synthase Similar to Bacillus sp. threonine synthase ThrC SWALL:THRC_BACSP (SWALL:P09123) (352 aa) fasta scores: E(): 4.9e-61%2C 49.14%25 id in 350 aa gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=TW330 TW331 TW331 thrB thrB 363012 364019 + homoserine kinase Similar to Clostridium acetobutylicum homoserine kinase ThrB or cac1235 SWALL:KHSE_CLOAB (SWALL:Q97JN8) (296 aa) fasta scores: E(): 6.2e-11%2C 30.18%25 id in 318 aa%2C and to Streptomyces coelicolor homoserine kinase ThrB or SCO5356 or SCBAC5H2.25 SWALL:KHSE_STRCO (SWALL:Q9ADB2) (309 aa) fasta scores: E(): 1e-16%2C 42.67%25 id in 321 aa gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=TW331 TW332 TW332 rho rho 364090 365454 + transcription termination factor Rho Similar to Streptomyces lividans transcription termination factor Rho SWALL:RHO_STRLI (SWALL:P52157) (707 aa) fasta scores: E(): 1.5e-46%2C 39.79%25 id in 387 aa%2C and to Micrococcus luteus transcription termination factor Rho SWALL:RHO_MICLU (SWALL:P52154) (690 aa) fasta scores: E(): 7.1e-48%2C 41.96%25 id in 386 aa%2C and to Staphylococcus aureus transcription termination factor Rho SWALL:Q9AGF7 (EMBL:AF333962) (443 aa) fasta scores: E(): 1.3e-39%2C 39.36%25 id in 348 aa gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=TW332 TW333 TW333 prfA prfA 365530 366573 + peptide chain release factor 1 Similar to Escherichia coli peptide chain release factor 1 PrfA or SueB or Uar or b1211 or z1982 or ecs1716 SWALL:RF1_ECOLI (SWALL:P07011) (360 aa) fasta scores: E(): 1.3e-47%2C 44.41%25 id in 322 aa%2C and to Streptomyces coelicolor peptide chain release factor 1 PrfA or SCO5360 or 2SC6G5.04 SWALL:RF1_STRCO (SWALL:Q9K4E4) (358 aa) fasta scores: E(): 3.2e-74%2C 55.11%25 id in 352 aa gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=TW333 TW334 TW334 TW334 366577 367434 + putative peptide chain release factor methyltransferase Similar to Escherichia coli protein methyltransferase HemK or b1212 SWALL:HEMK_ECOLI (SWALL:P37186) (277 aa) fasta scores: E(): 1.1e-18%2C 30.03%25 id in 273 aa gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=TW334 TW335 TW335 TW335 367483 368160 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5362 or 2SC6G5.06 SWALL:Q9K4E2 (EMBL:AL359152) (215 aa) fasta scores: E(): 9.1e-23%2C 44.44%25 id in 189 aa gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=TW335 TW336 TW336 TW336 368207 369307 + putative glycosyl transferase Similar to Mycobacterium tuberculosis putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe or rv1302 or mt1341 or mtcy373.22 SWALL:RFE_MYCTU (SWALL:Q10606) (404 aa) fasta scores: E(): 3.8e-34%2C 34.98%25 id in 363 aa%2C and to Yersinia enterocolitica WbcO protein SWALL:Q56918 (EMBL:Z47767) (341 aa) fasta scores: E(): 1.6e-10%2C 27.18%25 id in 320 aa gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=TW336 TW337 TW337 atpI atpI 369348 369785 + ATP synthase protein I Similar to Streptomyces coelicolor ATP synthase protein I AtpI or SCO5366 or 2SC6G5.10 SWALL:ATPZ_STRCO (SWALL:P50015) (144 aa) fasta scores: E(): 5.9%2C 20.63%25 id in 126 aa gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=TW337 TW338 TW338 atpB atpB 369786 370601 + ATP synthase A chain Similar to Streptomyces lividans ATP synthase A chain AtpB SWALL:ATP6_STRLI (SWALL:P50012) (281 aa) fasta scores: E(): 9.7e-26%2C 34.2%25 id in 269 aa%2C and to Brevibacterium flavum H+-ATPase A subunit atpB SWALL:Q9ETX4 (EMBL:AB048368) (322 aa) fasta scores: E(): 1.5e-41%2C 48.88%25 id in 270 aa gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=TW338 TW339 TW339 atpE atpE 370645 370872 + ATP synthase C chain Similar to Bacillus subtilis ATP synthase C chain AtpE SWALL:ATPL_BACSU (SWALL:P37815) (70 aa) fasta scores: E(): 6.5e-07%2C 49.18%25 id in 61 aa gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=TW339 TW340 TW340 atpF atpF 370894 371412 + ATP synthase B chain Similar to Streptomyces lividans ATP synthase B chain AtpF SWALL:ATPF_STRLI (SWALL:P50013) (181 aa) fasta scores: E(): 1.2e-10%2C 32.31%25 id in 164 aa gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=TW340 TW341 TW341 atpH atpH 371402 372190 + ATP synthase delta chain Similar to Streptomyces lividans ATP synthase delta chain AtpH SWALL:ATPD_STRLI (SWALL:P50008) (272 aa) fasta scores: E(): 3.2e-08%2C 27.27%25 id in 264 aa gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=TW341 TW342 TW342 atpA atpA 372201 373829 + ATP synthase alpha chain Similar to Streptomyces lividans ATP synthase alpha chain AtpA SWALL:ATPA_STRLI (SWALL:P50001) (528 aa) fasta scores: E(): 3.5e-126%2C 64.96%25 id in 508 aa gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=TW342 TW343 TW343 atpG atpG 373849 374859 + ATP synthase gamma chain Similar to Streptomyces lividans ATP synthase gamma chain AtpG SWALL:ATPG_STRLI (SWALL:P50007) (302 aa) fasta scores: E(): 4.5e-22%2C 43.07%25 id in 332 aa gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=TW343 TW344 TW344 atpD atpD 374908 376332 + ATP synthase beta chain Similar to Streptomyces lividans ATP synthase beta chain AtpD SWALL:ATPB_STRCO (SWALL:P50004) (477 aa) fasta scores: E(): 1.2e-122%2C 72.89%25 id in 476 aa gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=TW344 TW345 TW345 atpC atpC 376334 376618 + ATP synthase epsilon chain Similar to Streptomyces lividans ATP synthase epsilon chain AtpC SWALL:ATPE_STRCO (SWALL:P50011) (123 aa) fasta scores: E(): 7.2e-05%2C 35.48%25 id in 93 aa gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=TW345 TW346 TW346 rpsO rpsO 376790 377062 + 30s ribosomal protein S15 Similar to Escherichia coli 30s ribosomal protein S15 RpsO or SecC or b3165 SWALL:RS15_ECOLI (SWALL:P02371) (88 aa) fasta scores: E(): 7.7e-15%2C 58.22%25 id in 79 aa gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=TW346 TW347 TW347 pnp pnp 377107 379314 + mRNA processing exonuclease Similar to Streptomyces antibioticus guanosine pentaphosphate synthetase GpsI SWALL:Q53597 (EMBL:U19858) (740 aa) fasta scores: E(): 1.3e-101%2C 60.97%25 id in 738 aa%2C and to Yersinia enterocolitica polyribonucleotide nucleotidyltransferase Pnp SWALL:PNP_YEREN (SWALL:O34275) (706 aa) fasta scores: E(): 1.7e-59%2C 42.11%25 id in 729 aa gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=TW347 TW348 TW348 TW348 379342 380280 + putative cation efflux protein Similar to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcD SWALL:CZCD_ALCEU (SWALL:P13512) (316 aa) fasta scores: E(): 8e-25%2C 34.72%25 id in 288 aa%2C and to Escherichia coli zinc transporter ZitB or b0752 SWALL:ZITB_ECOLI (SWALL:P75757) (313 aa) fasta scores: E(): 1.6e-24%2C 31.92%25 id in 307 aa gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=TW348 TW349 TW349 TW349 380264 381343 - conserved hypothetical integral membrane protein Similar to Clostridium acetobutylicum predicted permease cac1677 SWALL:Q97IG4 (EMBL:AE007677) (341 aa) fasta scores: E(): 4.9e-14%2C 25.91%25 id in 328 aa gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=TW349 TW350 TW350 TW350 381354 383045 - putative low complexity hydrophilic protein N-terminal region similar to that of Streptomyces reticuli AbpS protein SWALL:O07481 (EMBL:Z97071) (311 aa) fasta scores: E(): 3.2e-06%2C 26.68%25 id in 296 aa gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=TW350 TW351 TW351 TW351 383069 384745 + putative integral membrane protein No significant database matches gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=TW351 TW352 TW352 TW352 384742 385893 + putative aminotransferase Similar to Rhodobacter sphaeroides cysteine desulfurase NifS SWALL:NIFS_RHOSH (SWALL:Q01179) (387 aa) fasta scores: E(): 6.7e-25%2C 31.34%25 id in 386 aa%2C and to Methanosarcina thermophila probable cysteine desulfurase IscS or NifS SWALL:ISCS_METTE (SWALL:P57795) (404 aa) fasta scores: E(): 1.2e-19%2C 32.29%25 id in 387 aa gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=TW352 TW353 TW353 trmU trmU 385916 386995 + probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Similar to Streptomyces coelicolor probable t TrmU or SCO5488 or SC2A11.22 SWALL:TRMU_STRCO (SWALL:O86583) (376 aa) fasta scores: E(): 6.8e-81%2C 57.45%25 id in 362 aa gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=TW353 TW354 TW354 ligA ligA 386982 388868 + DNA ligase Similar to Rhodothermus marinus DNA ligase LigA or Lig SWALL:DNLJ_RHOMR (SWALL:P49421) (712 aa) fasta scores: E(): 2.1e-36%2C 35.52%25 id in 625 aa gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=TW354 TW355 TW355 gatC gatC 389007 389309 + glutamyl-tRNA(gln) amidotransferase subunit C Similar to Bacillus subtilis glutamyl-tRNA(gln) amidotransferase subunit C GatC SWALL:GATC_BACSU (SWALL:O06492) (96 aa) fasta scores: E(): 0.43%2C 28.86%25 id in 97 aa gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=TW355 TW356 TW356 gatA gatA 389299 390780 + glutamyl-tRNA (gln) amidotransferase subunit A Similar to Bacillus subtilis glutamyl-tRNA (gln) amidotransferase subunit A GatA SWALL:GATA_BACSU (SWALL:O06491) (485 aa) fasta scores: E(): 3.1e-69%2C 44.44%25 id in 477 aa gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=TW356 TW357 TW357 gatB gatB 390777 392291 + glutamyl-tRNA (gln) amidotransferase subunit B Similar to Streptomyces coelicolor glutamyl-tRNA (gln) amidotransferase subunit B GatB or SCO5501 or SC8D9.13 SWALL:GATB_STRCO (SWALL:Q9Z578) (504 aa) fasta scores: E(): 4.3e-90%2C 47.02%25 id in 504 aa gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=TW357 TW358 TW358 TW358 392340 393296 - putative membrane protein Weakly similar to Streptomyces coelicolor putative membrane protein SCO7017 or SC1H10.06c SWALL:Q9L038 (EMBL:AL352956) (301 aa) fasta scores: E(): 0.034%2C 23.64%25 id in 313 aa gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=TW358 TW360 TW360 TW360 393620 394174 + putative integral membrane protein Similar to Corynebacterium glutamicum ABC-type transporter%2C permease components cgl1078 SWALL:BAB98471 (EMBL:AP005277) (196 aa) fasta scores: E(): 4.9e-17%2C 37.12%25 id in 167 aa gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=TW360 TW361 TW361 TW361 394242 395789 + putative ABC transporter ATP-binding subunit Similar to Staphylococcus aureus Mw0959 protein SWALL:BAB94824 (EMBL:AP004825) (466 aa) fasta scores: E(): 1.1e-17%2C 29.5%25 id in 505 aa%2C and to Escherichia coli taurine transport ATP-binding protein TauB or SsiB or b0366 SWALL:TAUB_ECOLI (SWALL:Q47538) (255 aa) fasta scores: E(): 2e-10%2C 30.73%25 id in 218 aa gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=TW361 TW362 TW362 TW362 395780 396508 + putative ABC transporter integral membrane subunit Similar to Corynebacterium glutamicum ABC-type transporter%2C permease components cgl1080 SWALL:BAB98473 (EMBL:AP005277) (251 aa) fasta scores: E(): 1.9e-14%2C 28.8%25 id in 243 aa gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=TW362 TW363 TW363 TW363 396636 396851 - putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO4848 or SC5G8.16 SWALL:Q9KZ98 (EMBL:AL353872) (79 aa) fasta scores: E(): 1.2%2C 31.74%25 id in 63 aa gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=TW363 TW364 TW364 orn orn 396883 397437 + oligoribonuclease Similar to Streptomyces coelicolor oligoribonuclease Orn or OrnA or SCO2793 or 2SCC13.01 SWALL:ORN_STRCO (SWALL:P57666) (200 aa) fasta scores: E(): 8.3e-30%2C 51.76%25 id in 170 aa gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=TW364 TW365 TW365 nadE nadE 397571 398386 + NH(3)-dependent NAD(+) synthetase Similar to Bacillus subtilis NH(3)-dependent NAD(+) synthetase NadE or OutB SWALL:NADE_BACSU (SWALL:P08164) (271 aa) fasta scores: E(): 1.1e-55%2C 55.26%25 id in 266 aa gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=TW365 TW366 TW366 TW366 398438 399064 - putative membrane protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=TW366 TW367 TW367 ssb2 ssb2 399273 399719 + single-strand DNA binding protein Similar to Streptomyces coelicolor putative single-strand DNA binding protein SCO2683 or SCC61A.04c SWALL:Q9KYI9 (EMBL:AL356595) (156 aa) fasta scores: E(): 2.4e-10%2C 41.07%25 id in 112 aa%2C and to Mycobacterium tuberculosis single-strand binding protein Ssb or rv0054 or mt0060 or mtcy21d4.17 SWALL:SSB_MYCTU (SWALL:P71711) (164 aa) fasta scores: E(): 1.6e-07%2C 30.08%25 id in 113 aa gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=TW367 TW368 TW368 TW368 399868 400374 + putative secreted protein No significant database matches. Note possible alternative downstream start codons gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=TW368 TW369 TW369 TW369 400381 402051 + putative ABC transporter ATP-binding protein Strongly conserved. Similar to Streptomyces coelicolor putative ABC transpoter ATP-binding protein SCO2677 or SC6D10.20c SWALL:Q9L244 (EMBL:AL138538) (547 aa) fasta scores: E(): 2.2e-112%2C 66.23%25 id in 545 aa%2C and to Escherichia coli O157:H7 ABC transporter ATP-binding protein YjjK or b4391 or z5993 or ecs5349 SWALL:YJJK_ECOLI (SWALL:P37797) (554 aa) fasta scores: E(): 5.3e-84%2C 50.82%25 id in 547 aa gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=TW369 TW370 TW370 TW370 402051 402527 + hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO2676 or SC6D10.19c SWALL:Q9L245 (EMBL:AL138538) (136 aa) fasta scores: E(): 3.1e-05%2C 34.64%25 id in 153 aa gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=TW370 TW371 TW371 pepN pepN 402731 405247 - aminopeptidase N Similar to Streptomyces lividans aminopeptidase N PepN SWALL:AMPN_STRLI (SWALL:Q11010) (857 aa) fasta scores: E(): 8.4e-69%2C 39.86%25 id in 858 aa gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=TW371 TW372 TW372 TW372 405395 406006 + conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2466c or mtv008.22C SWALL:O53193 (EMBL:AL021246) (207 aa) fasta scores: E(): 1e-25%2C 41.91%25 id in 198 aa gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=TW372 TW373 TW373 rpiB rpiB 406008 406475 + ribose 5-phosphate isomerase B Similar to Escherichia coli ribose 5-phosphate isomerase B RpiB or b4090 SWALL:RPIB_ECOLI (SWALL:P37351) (149 aa) fasta scores: E(): 1e-09%2C 32.21%25 id in 149 aa%2C and to Streptomyces coelicolor putative isomerase SCO2627 or SC8E4.02c SWALL:Q9L206 (EMBL:AL138661) (159 aa) fasta scores: E(): 1.8e-28%2C 57.43%25 id in 148 aa gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=TW373 TW374 TW374 nei nei 406503 407387 + endonuclease VIII Similar to Escherichia coli endonuclease VIII Nei or b0714 SWALL:END8_ECOLI (SWALL:P50465) (262 aa) fasta scores: E(): 6.4e-06%2C 24.34%25 id in 304 aa%2C and to Streptomyces coelicolor putative DNA repair hydrolase SCC80.11c or SCO2626 SWALL:Q9F308 (EMBL:AL442143) (306 aa) fasta scores: E(): 7.3e-12%2C 31.26%25 id in 323 aa gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=TW374 TW375 TW375 TW375 407389 407862 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5756 or SC7C7.11 SWALL:O86816 (EMBL:AL031031) (156 aa) fasta scores: E(): 3.8e-12%2C 37.68%25 id in 138 aa gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=TW375 TW376 TW376 TW376 407992 409074 - putative ribonuclease Similar to Corynebacterium glutamicum ribonuclease D cgl1901 SWALL:BAB99294 (EMBL:AP005280) (421 aa) fasta scores: E(): 2.8e-23%2C 33.97%25 id in 365 aa%2C and to Escherichia coli ribonuclease D Rnd or b1804 SWALL:RND_ECOLI (SWALL:P09155) (375 aa) fasta scores: E(): 0.003%2C 25.5%25 id in 247 aa gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=TW376 TW377 TW377 TW377 409148 409699 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO6030 or SC1C3.18c SWALL:O69860 (EMBL:AL023702) (238 aa) fasta scores: E(): 7.3e-15%2C 34.1%25 id in 173 aa gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=TW377 TW378 TW378 TW378 409719 410414 - conserved hypothetical protein Weakly similar to Sulfolobus tokodaii hypothetical protein St0285 SWALL:Q975Z3 (EMBL:AP000982) (213 aa) fasta scores: E(): 0.001%2C 29.19%25 id in 161 aa gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=TW378 TW379 TW379 TW379 410411 410809 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv3284 or mt3383 or mtcy71.24 SWALL:YW84_MYCTU (SWALL:P96889) (143 aa) fasta scores: E(): 7.6e-19%2C 45.86%25 id in 133 aa gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=TW379 TW380 TW380 TW380 410908 411816 - putative thiosulfate sulfurtransferase Similar to Mycobacterium tuberculosis putative thiosulfate sulfurtransferase SseA or Rv3283 or mt3382 or mtcy71.23 SWALL:THT2_MYCTU (SWALL:P96888) (297 aa) fasta scores: E(): 2.1e-65%2C 56.33%25 id in 284 aa%2C and to Saccharopolyspora erythraea putative thiosulfate sulfurtransferase CysA SWALL:THTR_SACER (SWALL:P16385) (281 aa) fasta scores: E(): 3.2e-54%2C 51.67%25 id in 269 aa gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=TW380 TW381 TW381 TW381 412536 413744 - putative secreted protein Short C-terminal region similar to that of Streptomyces coelicolor hypothetical protein SCO2326 or SCC53.17 SWALL:Q9KXJ4 (EMBL:AL357591) (154 aa) fasta scores: E(): 1.6e-13%2C 51.54%25 id in 97 aa gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=TW381 TW382 TW382 TW382 413741 414856 - putative integral membrane protein. Similar to Streptomyces coelicolor putative integral membrane protein SCO0796 or SCF43.07 SWALL:Q9RD81 (EMBL:AL136502) (419 aa) fasta scores: E(): 6.6e-08%2C 22%25 id in 359 aa gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=TW382 TW383 TW383 TW383 414883 416610 - putative membrane protein C-terminal region similar to Corynebacterium glutamicum hypothetical protein Cgl2257 SWALL:BAB99650 (EMBL:AP005281) (344 aa) fasta scores: E(): 5.7e-32%2C 38.72%25 id in 315 aa. N-terminal region similar to Escherichia coli DedA protein or b2317 or z3579 or ecs3201 SWALL:DEDA_ECOLI (SWALL:P09548) (219 aa) fasta scores: E(): 1.4e-09%2C 28.65%25 id in 178 aa gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=TW383 TW384 TW384 trpE trpE 416640 418070 + anthranilate synthase component I Similar to Sulfolobus solfataricus anthranilate synthase component I TrpE or Sso0893 SWALL:TRPE_SULSO (SWALL:Q06128) (421 aa) fasta scores: E(): 5.8e-35%2C 42.96%25 id in 263 aa%2C and to Streptomyces coelicolor anthranilate synthase component I TrpE or SCO3214 or SCE8.07c SWALL:TRPE_STRCO (SWALL:Q9Z4W7) (511 aa) fasta scores: E(): 5.1e-33%2C 32.27%25 id in 474 aa gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=TW384 TW385 TW385 leuS leuS 418111 420531 + leucyl-tRNA synthetase Similar to Escherichia coli leucyl-tRNA synthetase LeuS or b0642 SWALL:SYL_ECOLI (SWALL:P07813) (860 aa) fasta scores: E(): 2.5e-64%2C 37.77%25 id in 863 aa gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=TW385 TW386 TW386 TW386 420613 421194 + putative DNA uptake protein Similar to Thermoanaerobacter tengcongensis DNA uptake protein and related DNA-binding proteins ComEA or tte0926 SWALL:Q8RB96 (EMBL:AE013058) (196 aa) fasta scores: E(): 8.4e-06%2C 42.64%25 id in 136 aa%2C and to Bacillus subtilis ComE operon protein 1 ComEA or ComE1 SWALL:CME1_BACSU (SWALL:P39694) (205 aa) fasta scores: E(): 0.00054%2C 33.5%25 id in 197 aa gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=TW386 TW387 TW387 TW387 421191 422609 + putative DNA uptake protein Similar to N-terminal portion of Bacillus subtilis ComE operon protein 3 ComEC or ComE3 SWALL:CME3_BACSU (SWALL:P39695) (776 aa) fasta scores: E(): 4.4e-06%2C 24.23%25 id in 487 aa gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=TW387 TW388 TW388 TW388 422606 423442 + putative DNA uptake protein Similar to C-terminal portion of Bacillus subtilis comE operon protein 3 ComEC or ComE3 SWALL:CME3_BACSU (SWALL:P39695) (776 aa) fasta scores: E(): 2e-10%2C 24.83%25 id in 298 aa gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=TW388 TW389 TW389 TW389 423503 424432 + conserved hypothetical protein Weakly similar to Corynebacterium glutamicum predicted DNA polymerase III delta subunit cgl2346 SWALL:BAB99739 (EMBL:AP005281) (325 aa) fasta scores: E(): 4.6e-15%2C 25.23%25 id in 325 aa gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=TW389 TW390 TW390 TW390 424690 425814 - hypothetical protein No significant database matches gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=TW390 TW391 TW391 TW391 425857 427077 - hypothetical protein No significant database matches gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=TW391 TW392 TW392 rpsD rpsD 427160 427777 + 30s ribosomal protein S4 Similar to Bacillus stearothermophilus 30s ribosomal protein S4 RpsD SWALL:RS4_BACST (SWALL:P81288) (198 aa) fasta scores: E(): 4.9e-25%2C 45.4%25 id in 196 aa gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=TW392 TW393 TW393 alaS alaS 427986 430628 + alanyl-tRNA synthetase Similar to Escherichia coli alanyl-tRNA synthetase AlaS or LovB or b2697 SWALL:SYA_ECOLI (SWALL:P00957) (876 aa) fasta scores: E(): 2.3e-77%2C 36.58%25 id in 902 aa gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=TW393 TW394 TW394 TW394 430659 431096 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO1500 or SC9C5.24c SWALL:Q9KXQ0 (EMBL:AL357523) (167 aa) fasta scores: E(): 1.3e-08%2C 38.06%25 id in 134 aa gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=TW394 TW395 TW395 TW395 431279 432280 + conserved hypothetical protein (possibly secreted) Similar to Neisseria meningitidis hypothetical protein Nmb0669 SWALL:Q9K0E0 (EMBL:AE002421) (331 aa) fasta scores: E(): 7e-21%2C 30.97%25 id in 339 aa gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=TW395 TW396 TW396 aroE aroE 432281 433228 + shikimate 5-dehydrogenase Similar to Neisseria polysaccharea shikimate 5-dehydrogenase AroE SWALL:AROE_NEIPO (SWALL:P95399) (269 aa) fasta scores: E(): 0.0029%2C 36.73%25 id in 98 aa%2C and to Xylella fastidiosa shikimate 5-dehydrogenase xf0624 SWALL:Q9PFN3 (EMBL:AE003908) (282 aa) fasta scores: E(): 2e-05%2C 34.14%25 id in 123 aa gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=TW396 TW397 TW397 aroC aroC 433349 434551 + chorismate synthase Similar to Staphylococcus aureus chorismate synthase AroC SWALL:AROC_STAAU (SWALL:Q59803) (388 aa) fasta scores: E(): 8.8e-59%2C 43.04%25 id in 381 aa gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=TW397 TW398 TW398 aroK aroK 434582 435082 + shikimate kinase Similar to Lactococcus lactis shikimate kinase AroK SWALL:AROK_LACLC (SWALL:P43906) (162 aa) fasta scores: E(): 2.1e-08%2C 30.81%25 id in 159 aa gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=TW398 TW399 TW399 aroB aroB 435142 436284 + 3-dehydroquinate synthase Similar to Escherichia coli 3-dehydroquinate synthase AroB or b3389 SWALL:AROB_ECOLI (SWALL:P07639) (362 aa) fasta scores: E(): 1e-23%2C 37.93%25 id in 290 aa%2C and to Corynebacterium glutamicum 3-dehydroquinate synthase AroB or cgl1621 SWALL:AROB_CORGL (SWALL:Q9X5D2) (366 aa) fasta scores: E(): 1.4e-40%2C 40.51%25 id in 311 aa gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=TW399 TW400 TW400 aroQ aroQ 436368 436817 + 3-dehydroquinate dehydratase Similar to Actinobacillus pleuropneumoniae 3-dehydroquinate dehydratase AroQ SWALL:AROQ_ACTPL (SWALL:P43877) (154 aa) fasta scores: E(): 5.2e-19%2C 45.51%25 id in 145 aa gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=TW400 TW401 TW401 efp efp 436842 437399 + elongation factor P Similar to Escherichia coli elongation factor P Efp or b4147 or z5752 or ecs5128 SWALL:EFP_ECOLI (SWALL:P33398) (187 aa) fasta scores: E(): 9.8e-21%2C 37.01%25 id in 181 aa%2C and to Corynebacterium glutamicum elongation factor P Efp or cgl1619 SWALL:EFP_CORGL (SWALL:Q45288) (187 aa) fasta scores: E(): 2.1e-37%2C 54.89%25 id in 184 aa gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=TW401 TW402 TW402 pyrC pyrC 437412 438698 + dihydroorotase Similar to Bacillus caldolyticus dihydroorotase PyrC SWALL:PYRC_BACCL (SWALL:P46538) (427 aa) fasta scores: E(): 1.7e-44%2C 37.46%25 id in 387 aa gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=TW402 TW403 TW403 carA carA 438740 439885 + carbamoyl-phosphate synthase small chain Similar to Sulfolobus solfataricus carbamoyl-phosphate synthase small chain CarA or Sso0640 SWALL:CARA_SULSO (SWALL:Q59968) (367 aa) fasta scores: E(): 1.2e-37%2C 34.21%25 id in 380 aa%2C and to Streptomyces coelicolor carbamoyl-phosphate synthase small chain CarA or PyrAa or SCO1484 or SC9C5.08c SWALL:CARA_STRCO (SWALL:Q9KXR5) (380 aa) fasta scores: E(): 3.4e-74%2C 52.29%25 id in 371 aa gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=TW403 TW404 TW404 carB carB 439872 443183 + carbamoyl-phosphate synthase large chain Similar to Escherichia coli carbamoyl-phosphate synthase large chain CarB or PyrA or b0033 SWALL:CARB_ECOLI (SWALL:P00968) (1072 aa) fasta scores: E(): 9.4e-176%2C 49.22%25 id in 1099 aa gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=TW404 TW405 TW405 pyrF pyrF 443180 444091 + orotidine 5'-phosphate decarboxylase Similar to Mycobacterium smegmatis orotidine 5'-phosphate decarboxylase PyrF SWALL:PYRF_MYCSM (SWALL:O08323) (276 aa) fasta scores: E(): 4.1e-22%2C 38.79%25 id in 281 aa%2C and to Myxococcus xanthus orotidine 5'-phosphate decarboxylase PyrF or UraA SWALL:PYRF_MYXXA (SWALL:P24220) (288 aa) fasta scores: E(): 3.4e-16%2C 30.43%25 id in 276 aa gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=TW405 TW406 TW406 gmk gmk 444443 445024 + guanylate kinase Similar to Escherichia coli guanylate kinase Gmk or SpoR or b3648 SWALL:KGUA_ECOLI (SWALL:P24234) (207 aa) fasta scores: E(): 4.2e-19%2C 39.42%25 id in 175 aa%2C and to Streptomyces coelicolor guanylate kinase Gmk or SCO1479 or SC9C5.03c SWALL:KGUA_STRCO (SWALL:Q9KXS0) (197 aa) fasta scores: E(): 2e-31%2C 50.55%25 id in 180 aa. Note possible alternative upstream translational start sites. gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=TW406 TW407 TW407 rpoZ rpoZ 445147 445404 + DNA-directed RNA polymerase omega chain Similar to Thermus aquaticus DNA-directed RNA polymerase omega chain RpoZ SWALL:RPOZ_THEAQ (SWALL:Q9EVV4) (98 aa) fasta scores: E(): 2.9%2C 29.16%25 id in 72 aa%2C and to Streptomyces coelicolor probable DNA-directed RNA polymerase omega chain RpoZ or SCO1478 or SC9C5.02c SWALL:RPOZ_STRCO (SWALL:Q9KXS1) (90 aa) fasta scores: E(): 3e-10%2C 56.71%25 id in 67 aa gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=TW407 TW408 TW408 TW408 445401 446633 + putative flavoprotein Similar to many predicted flavoproteins eg. Mycobacterium tuberculosis DNA/pantothenate metabolism flavoprotein homolog Dfp or rv1391 or mt1436 or mtcy21b4.08 SWALL:DFP_MYCTU (SWALL:P71661) (418 aa) fasta scores: E(): 7.4e-51%2C 42.05%25 id in 409 aa gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=TW408 TW409 TW409 metK metK 446643 447830 + S-adenosylmethionine synthetase Similar to Bacillus subtilis S-adenosylmethionine synthetase MetK or MetE SWALL:METK_BACSU (SWALL:P54419) (400 aa) fasta scores: E(): 1.3e-77%2C 52.8%25 id in 392 aa gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=TW409 TW410 TW410 TW410 447831 449705 + conserved hypothetical protein Similar to Mycobacterium tuberculosis putative primosomal protein N' PriA or Rv1402 or mt1446 or mtcy21b4.19 SWALL:PRIA_MYCTU (SWALL:P71670) (655 aa) fasta scores: E(): 2.5e-18%2C 30.1%25 id in 598 aa gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=TW410 TW411 TW411 fmt fmt 449695 450654 + methionyl-tRNA formyltransferase Similar to Escherichia coli methionyl-tRNA formyltransferase Fmt or b3288 SWALL:FMT_ECOLI (SWALL:P23882) (314 aa) fasta scores: E(): 1.9e-19%2C 32.57%25 id in 307 aa%2C and to Streptomyces coelicolor methionyl-trna formyltransferase fmt or sco1473 or scl6.30C SWALL:Q9L0Y6 (EMBL:AL159139) (310 aa) fasta scores: E(): 4e-26%2C 34.81%25 id in 316 aa gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=TW411 TW413 TW413 rpe rpe 450954 451613 + D-ribulose-5-phosphate 3-epimerase Similar to Streptomyces coelicolor ribulose-phosphate 3-epimerase Rpe or SCO1464 or SCl6.21c SWALL:RPE_STRCO (SWALL:Q9L0Z5) (228 aa) fasta scores: E(): 3.3e-32%2C 44.97%25 id in 209 aa%2C and to Oryza sativa D-ribulose-5-phosphate 3-epimerase SWALL:Q9SE42 (EMBL:AF189365) (228 aa) fasta scores: E(): 8.5e-23%2C 36.57%25 id in 216 aa gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=TW413 TW414 TW414 TW414 451660 452754 - putative sugar-1-phosphate nucleotidyltransferase Similar to Escherichia coli mannose-1-phosphate guanylyltransferase ManC or RfbM SWALL:RFM7_ECOLI (SWALL:P37741) (464 aa) fasta scores: E(): 2.1e-32%2C 33.51%25 id in 367 aa%2C and to Deinococcus radiodurans mannose-1-phosphate guanylyltransferase dra0032 SWALL:Q9RZC2 (EMBL:AE001862) (372 aa) fasta scores: E(): 2.4e-38%2C 35.09%25 id in 359 aa gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=TW414 TW415 TW415 pstS pstS 452949 454019 + ABC transporter phosphate-binding lipoprotein Similar to Mycobacterium tuberculosis phosphate-binding protein 2 precursor PstS2 or rv0932c or mt0959 or mtcy08d9.07 SWALL:PST2_MYCTU (SWALL:O05870) (370 aa) fasta scores: E(): 2.1e-28%2C 32.94%25 id in 340 aa gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=TW415 TW416 TW416 pstC pstC 454102 455001 + phosphate ABC transporter permease Similar to Mycobacterium tuberculosis phosphate transport system permease protein PstC-2 or Rv0929 or mt0956 or mtcy21c12.23 SWALL:PSC2_MYCTU (SWALL:O86344) (324 aa) fasta scores: E(): 2.8e-30%2C 40.83%25 id in 289 aa%2C and to Escherichia coli phosphate transport system permease protein PstC or PhoW or b3727 or z5218 or ecs4663 SWALL:PSTC_ECOLI (SWALL:P07653) (319 aa) fasta scores: E(): 6.4e-25%2C 34.01%25 id in 294 aa gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=TW416 TW417 TW417 pstA pstA 455068 455961 + phosphate ABC transporter permease Similar to Mycobacterium tuberculosis phosphate transport system permease protein PstA-1 or Rv0930 or mt0957 or mtcy21c12.24 SWALL:PSA1_MYCTU (SWALL:O86345) (305 aa) fasta scores: E(): 6.3e-39%2C 43.35%25 id in 286 aa%2C and to Escherichia coli phosphate transport system permease protein PstA or PhoT or b3726 SWALL:PSTA_ECOLI (SWALL:P07654) (296 aa) fasta scores: E(): 1.7e-29%2C 37.5%25 id in 280 aa gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=TW417 TW418 TW418 TW418 455972 456745 + phosphate ABC transporter ATP-binding protein Similar to Mycobacterium smegmatis putative ABC transporter nucleotide binding subunit Mtp1 SWALL:O68469 (EMBL:AF045938) (258 aa) fasta scores: E(): 4.9e-48%2C 57.52%25 id in 259 aa%2C and to Bacillus subtilis hypothetical ABC transporter ATP-binding protein YqgJ yqgJ SWALL:YQGJ_BACSU (SWALL:P46341) (269 aa) fasta scores: E(): 7.5e-40%2C 50.78%25 id in 256 aa gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=TW418 TW419 TW419 argS argS 456981 458633 + arginyl-tRNA synthetase Similar to Corynebacterium glutamicum arginyl-tRNA synthetase ArgS or cgl1179 SWALL:SYR_CORGL (SWALL:P35868) (550 aa) fasta scores: E(): 1.2e-80%2C 40.61%25 id in 554 aa gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=TW419 TW420 TW420 TW420 458872 459096 + hypothetical protein Doubtful CDS. No significant database matches gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=TW420 TW421 TW421 TW421 459221 459703 + putative CarD-family transcriptional regulator Similar to Streptomyces coelicolor putative transcriptional factor regulator SCO4232 or SCD8A.05 SWALL:Q9L0Q9 (EMBL:AL160331) (160 aa) fasta scores: E(): 4.3e-32%2C 66.03%25 id in 159 aa%2C and to Myxococcus xanthus CarD protein SWALL:Q50887 (EMBL:Z56280) (316 aa) fasta scores: E(): 1.1e-09%2C 28.48%25 id in 158 aa gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=TW421 TW422 TW422 TW422 459710 460978 + putative terpenoid biosynthesis bifunctional enzyme Fusion protein. N-terminal region similar to Streptomyces coelicolor 2-c-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD or SCO4233 or SCD8A.06 SWALL:ISPD_STRCO (SWALL:Q9L0Q8) (270 aa) fasta scores: E(): 1.5e-12%2C 36.05%25 id in 233 aa Full length similarity to Rhizobium meliloti IspD/IspF bifunctional enzyme [includes: 2-c-methyl-D-erythritol 4- phosphate cytidylyltransferase ispdf or r01456 or smc01040 SWALL:ISDF_RHIME (SWALL:Q92Q90) (434 aa) fasta scores: E(): 5.7e-11%2C 28.7%25 id in 425 aa. C-terminal region similar to Escherichia coli 2-c-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase IspF or MecS or b2746 or z4054 or ecs3600 SWALL:ISPF_ECOLI (SWALL:P36663) (159 aa) fasta scores: E(): 3.9e-10%2C 35.52%25 id in 152 aa gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=TW422 TW423 TW423 cysS1 cysS1 461063 462463 + cysteinyl-tRNA synthetase Similar to Escherichia coli cysteinyl-tRNA synthetase CysS or b0526 SWALL:SYC_ECOLI (SWALL:P21888) (461 aa) fasta scores: E(): 7.6e-57%2C 38.75%25 id in 467 aa gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=TW423 TW424 TW424 TW424 462460 463251 + putative rRNA methyltransferase Similar to Mycobacterium leprae putative methyltransferase Ml0324 SWALL:Q9CCW4 (EMBL:AL583918) (278 aa) fasta scores: E(): 2.3e-30%2C 41.29%25 id in 247 aa%2C and to Bacillus subtilis hypothetical tRNA/rRNA methyltransferase YacO SWALL:YACO_BACSU (SWALL:Q06753) (249 aa) fasta scores: E(): 2.1e-23%2C 33.19%25 id in 244 aa gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=TW424 TW425 TW425 TW425 463366 464247 + putative secreted protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2969c or mt3047 or mtcy349.18 SWALL:O33272 (EMBL:Z83018) (261 aa) fasta scores: E(): 8.8e-05%2C 29.31%25 id in 249 aa gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=TW425 TW426 TW426 TW426 464516 464956 + putative integral membrane protein No significant database matches gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=TW426 TW428 TW428 zwf zwf 465159 466622 - glucose-6-phosphate 1-dehydrogenase Similar to Actinobacillus actinomycetemcomitans glucose-6-phosphate 1-dehydrogenase Zwf SWALL:G6PD_ACTAC (SWALL:P77809) (494 aa) fasta scores: E(): 8e-67%2C 37.96%25 id in 482 aa%2C and to Homo sapiens glucose-6-phosphate dehydrogenase G6pD SWALL:Q96PQ2 (EMBL:AF277315) (515 aa) fasta scores: E(): 2.2e-58%2C 36.67%25 id in 469 aa gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=TW428 TW429 TW429 pgi pgi 466665 468308 - glucose-6-phosphate isomerase Similar to Synechocystis sp. glucose-6-phosphate isomerase pgi or slr1349 SWALL:G6PI_SYNY3 (SWALL:P52983) (531 aa) fasta scores: E(): 4.8e-07%2C 26.91%25 id in 353 aa gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=TW429 TW430 TW430 tal tal 468325 469419 - transaldolase Similar to Mycobacterium tuberculosis transaldolase Tal or Rv1448c or mt1495 or mtcy493.06 SWALL:TAL_MYCTU (SWALL:O06812) (373 aa) fasta scores: E(): 2.6e-72%2C 54.14%25 id in 362 aa%2C and to Solanum tuberosum transaldolase pottal1 SWALL:O04894 (EMBL:U95923) (438 aa) fasta scores: E(): 5.1e-49%2C 44.22%25 id in 355 aa gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=TW430 TW431 TW431 tkt tkt 469409 471505 - transketolase Similar to Mycobacterium tuberculosis transketolase Tkt or Rv1449c or mt1496 or mtcy493.05 SWALL:TKT_MYCTU (SWALL:O06811) (700 aa) fasta scores: E(): 4.7e-157%2C 59.42%25 id in 690 aa%2C and to Saccharomyces cerevisiae transketolase 1 Tkl1 or ypr074c or yp9499.29C SWALL:TKT1_YEAST (SWALL:P23254) (679 aa) fasta scores: E(): 1.2e-97%2C 43.34%25 id in 676 aa gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=TW431 TW432 TW432 TW432 471644 472546 + putative cytochrome synthase Similar to Streptomyces coelicolor putative cytochrome oxidase assembly factor SCO1934 or SCC22.16c SWALL:Q9XAC2 (EMBL:AL096839) (340 aa) fasta scores: E(): 5.1e-53%2C 48.11%25 id in 291 aa%2C and to Bradyrhizobium japonicum putative heme O synthase CoxE SWALL:Q9RM98 (EMBL:AJ242592) (314 aa) fasta scores: E(): 8.3e-35%2C 37.01%25 id in 281 aa. Note considerable overlap with downstream converging CDS. gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=TW432 TW433 TW433 TW433 472470 473525 - putative cytochrome synthase Similar to Bacillus stearothermophilus heme O oxygenase CtaA SWALL:P94346 (EMBL:D70843) (320 aa) fasta scores: E(): 0.00037%2C 26.71%25 id in 146 aa%2C and to Bacillus subtilis cytochrome aa3 controlling protein CtaA SWALL:CTAA_BACSU (SWALL:P12946) (306 aa) fasta scores: E(): 0.031%2C 20.94%25 id in 296 aa gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=TW433 TW434 TW434 TW434 473664 475085 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO1925 or scc22.07C SWALL:Q9XAD1 (EMBL:AL096839) (473 aa) fasta scores: E(): 3.4e-141%2C 74.13%25 id in 464 aa%2C and to Escherichia coli SufB protein or b1683 SWALL:SUFB_ECOLI (SWALL:P77522) (495 aa) fasta scores: E(): 3.1e-61%2C 38.7%25 id in 478 aa gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=TW434 TW435 TW435 TW435 475078 476226 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO1924 or SCC22.06c SWALL:Q9XAD2 (EMBL:AL096839) (394 aa) fasta scores: E(): 1.5e-45%2C 37.46%25 id in 379 aa gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=TW435 TW436 TW436 TW436 476251 476553 + putative dioxygenase 2Fe-2S ferredoxin subunit Similar to Escherichia coli 3-phenylpropionate dioxygenase ferredoxin subunit HcaC or PhdB or HcaA3 or b2540 or z3811 or ecs3406 SWALL:HCAC_ECOLI (SWALL:P77266) (106 aa) fasta scores: E(): 3.4e-14%2C 45.91%25 id in 98 aa%2C and to Pseudomonas putida benzene 1%2C2-dioxygenase system ferredoxin component BedB SWALL:BEDB_PSEPU (SWALL:Q07947) (107 aa) fasta scores: E(): 7.7e-11%2C 39.78%25 id in 93 aa gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=TW436 TW437 TW437 TW437 476687 477436 + putative ABC transporter ATP-binding subunit Similar to Streptomyces coelicolor putative ABC transporter ATP-binding subunit SCO1922 or SCC22.04c SWALL:Q9XAD4 (EMBL:AL096839) (254 aa) fasta scores: E(): 2.5e-55%2C 70.04%25 id in 247 aa%2C and to Cyanidium caldarium probable ATP-dependent transporter Ycf16 or Ycf33 SWALL:ABCX_CYACA (SWALL:Q9TLX1) (254 aa) fasta scores: E(): 8e-32%2C 48.19%25 id in 249 aa gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=TW437 TW438 TW438 TW438 477461 477811 + conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv1466 or mtv007.13 or mt1513 SWALL:O53157 (EMBL:AL021184) (115 aa) fasta scores: E(): 3.6e-18%2C 52.52%25 id in 99 aa gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=TW438 TW439 TW439 TW439 477896 478753 - putative membrane protein Weakly similar to Streptomyces coelicolor putative membrane protein SCO1829 or SCI8.14 SWALL:Q9RJ39 (EMBL:AL132644) (290 aa) fasta scores: E(): 5.4e-10%2C 27.75%25 id in 263 aa gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=TW439 TW440 TW440 uppS1 uppS1 479180 479956 - undecaprenyl pyrophosphate synthetase Similar to Micrococcus luteus undecaprenyl pyrophosphate synthetase UppS SWALL:UPPS_MICLU (SWALL:O82827) (249 aa) fasta scores: E(): 1.8e-23%2C 33.47%25 id in 239 aa%2C and to Mycobacterium leprae possible undecaprenyl pyrophosphate synthetase ml2467 SWALL:Q9CB36 (EMBL:AL583925) (262 aa) fasta scores: E(): 9e-36%2C 43.24%25 id in 259 aa gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=TW440 TW441 TW441 TW441 480076 481632 + putative sugar ABC transporter ATP-binding subunit Similar to Bacillus stearothermophilus L-arabinose transport ATP-binding protein AraG SWALL:ARAG_BACST (SWALL:Q9S472) (513 aa) fasta scores: E(): 5e-88%2C 55.07%25 id in 512 aa%2C and to Escherichia coli D-allose transport ATP-binding protein AlsA or b4087 SWALL:ALSA_ECOLI (SWALL:P32721) (510 aa) fasta scores: E(): 3.8e-48%2C 36.54%25 id in 509 aa gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=TW441 TW442 TW442 TW442 481622 482845 + putative sugar ABC transporter permease subunit Similar to Bacillus stearothermophilus L-arabinose membrane permease AraH SWALL:Q9S471 (EMBL:AF160811) (407 aa) fasta scores: E(): 3.6e-55%2C 42.32%25 id in 378 aa%2C and to Bacillus subtilis ribose transport system permease protein RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: E(): 2.6e-15%2C 29.34%25 id in 368 aa gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=TW442 TW443 TW443 TW443 482886 483956 + putative sugar ABC transporter substrate-binding lipoprotein subunit Similar to Agrobacterium tumefaciens multiple sugar-binding periplasmic receptor ChvE precursor or atu2348 or agr_c_4267 SWALL:CHVE_AGRT5 (SWALL:P25548) (354 aa) fasta scores: E(): 4.6e-43%2C 42.68%25 id in 328 aa%2C and to Escherichia coli D-xylose-binding periplasmic protein precursor XylF or XylT or b3566 SWALL:XYLF_ECOLI (SWALL:P37387) (330 aa) fasta scores: E(): 1.8e-10%2C 34.19%25 id in 310 aa gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=TW443 TW444 TW444 TW444 484012 484953 + putative carboxypeptidase Similar to Streptomyces clavuligerus Pbp2 protein or PbpA SWALL:O54201 (EMBL:AJ001743) (696 aa) fasta scores: E(): 7.8e-10%2C 32.36%25 id in 207 aa%2C and to Bacillus subtilis penicillin-binding protein DacF precursor SWALL:DACF_BACSU (SWALL:P38422) (389 aa) fasta scores: E(): 0.0009%2C 23.07%25 id in 299 aa gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=TW444 TW445 TW445 adh adh 485059 486129 - alcohol dehydrogenase Similar to Alcaligenes eutrophus alcohol dehydrogenase Adh SWALL:ADH_ALCEU (SWALL:P14940) (366 aa) fasta scores: E(): 3.4e-24%2C 35.13%25 id in 370 aa gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=TW445 TW446 TW446 TW446 486396 487262 + putative TatD-family DNase Similar to Escherichia coli putative deoxyribonuclease YcfH or b1100 or z1739 or ecs1478 SWALL:YCFH_ECOLI (SWALL:P37346) (265 aa) fasta scores: E(): 5.3e-15%2C 30.38%25 id in 283 aa gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=TW446 TW447 TW447 TW447 487588 488229 + putative integral membrane protein No significant database matches. Frameshifted at potentially variable G(11) tract after aa 14. Contain 6x PTT(S/V) repeat at residue 153-176. gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=TW447 TW449 TW449 TW449 488391 488660 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO2947 or SCE59.06c SWALL:Q9L1U7 (EMBL:AL138851) (97 aa) fasta scores: E(): 2.5e-08%2C 48.27%25 id in 58 aa gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=TW449 TW450 TW450 TW450 488661 489437 - putative oxidoreductase Similar to Ralstonia solanacearum probable dehydrogenase oxidoreductase protein Rsp0305 or rs05466 SWALL:Q8XT12 (EMBL:AL646077) (255 aa) fasta scores: E(): 1.2e-07%2C 32.06%25 id in 237 aa%2C and to Escherichia coli 7-alpha-hydroxysteroid dehydrogenase HdhA or HsdA or b1619 or z2624 or ecs2327 SWALL:HDHA_ECOLI (SWALL:P25529) (255 aa) fasta scores: E(): 2.4e-05%2C 28.63%25 id in 234 aa gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=TW450 TW451 TW451 tatC tatC 489434 490156 - sec-independent protein translocase protein TatC Similar to Pseudomonas stutzeri TatC protein SWALL:Q9AKS0 (EMBL:AJ299712) (267 aa) fasta scores: E(): 8.5e-12%2C 31.12%25 id in 241 aa%2C and to Streptomyces lividans twin arginine translocation pathway TatC SWALL:Q9F2H3 (EMBL:AJ251149) (301 aa) fasta scores: E(): 5.9e-19%2C 35.1%25 id in 245 aa gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=TW451 TW452 TW452 tatA tatA 490167 490448 - sec-independent protein translocase protein TatA Similar to Escherichia coli sec-independent protein translocase protein TatA or MttA1 or b3836 or z5358 or ecs4766 SWALL:TATA_ECOLI (SWALL:O65938) (89 aa) fasta scores: E(): 0.11%2C 28.57%25 id in 91 aa%2C and to Helicobacter pylori sec-independent protein translocase protein TatA/E homolog TatA or hp0320 SWALL:TATA_HELPY (SWALL:O25088) (79 aa) fasta scores: E(): 0.00039%2C 31.25%25 id in 80 aa gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=TW452 TW453 TW453 TW453 490453 491337 - putative drug-binding lipoprotein Similar to Streptomyces chrysomallus FKBP-33 precursor FkbB SWALL:Q53919 (EMBL:Z34523) (312 aa) fasta scores: E(): 1.8e-12%2C 36.29%25 id in 281 aa gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=TW453 TW454 TW454 TW454 491355 492323 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO1651 or SCI41.34c SWALL:Q9RJ57 (EMBL:AL132648) (300 aa) fasta scores: E(): 7.6e-17%2C 35.97%25 id in 303 aa gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=TW454 TW455 TW455 TW455 492381 493271 + conserved hypothetical protein Similar to Mycobacterium leprae hypothetical protein Ml1306 SWALL:Q9CC38 (EMBL:AL583921) (274 aa) fasta scores: E(): 1.7e-30%2C 36.36%25 id in 275 aa gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=TW455 TW456 TW456 cysS2 cysS2 493213 494565 - cysteinyl-tRNA synthetase Similar to Escherichia coli cysteinyl-tRNA synthetase CysS or b0526 SWALL:SYC_ECOLI (SWALL:P21888) (461 aa) fasta scores: E(): 2e-23%2C 32.06%25 id in 315 aa%2C and to Streptomyces coelicolor putative cysteinyl-trna synthetase sco1663 or sci52.05C SWALL:Q9ADA4 (EMBL:AL590507) (409 aa) fasta scores: E(): 6e-44%2C 40.22%25 id in 348 aa gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=TW456 TW457 TW457 upk upk 494619 495458 - putative undecaprenol kinase Similar to Staphylococcus aureus putative undecaprenol kinase Upk or BacA or mw0645 SWALL:BAB94510 (EMBL:AP004824) (291 aa) fasta scores: E(): 6.4e-18%2C 27.93%25 id in 290 aa%2C and to Streptomyces coelicolor putative undecaprenol kinase 2 Upk2 or BacA2 or SCO1326 or 2SCG61.08 SWALL:UPK2_STRCO (SWALL:Q9K407) (291 aa) fasta scores: E(): 1.4e-25%2C 32.98%25 id in 285 aa gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=TW457 TW458 TW458 rpmE rpmE 495667 495918 - 50s ribosomal protein L31 Similar to Streptomyces coelicolor 50s ribosomal protein L31 type B-2 RpmE3 or SCO3427 or SCE9.34c SWALL:R31C_STRCO (SWALL:Q9X8K6) (84 aa) fasta scores: E(): 9.3e-17%2C 55.55%25 id in 81 aa%2C and to Guillardia theta chloroplast 50s ribosomal protein l31 rpl31 SWALL:RK31_GUITH (SWALL:O46917) (72 aa) fasta scores: E(): 0.00065%2C 35.06%25 id in 77 aa gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=TW458 TW459 TW459 fabG fabG 496060 496776 - 3-oxoacyl-[acyl-carrier protein] reductase Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or b1093 SWALL:FABG_ECOLI (SWALL:P25716) (244 aa) fasta scores: E(): 1.5e-33%2C 43.51%25 id in 239 aa%2C and to Streptomyces coelicolor probable 3-oxacyl- FabG or SCO1815 or SCI28.09c SWALL:Q9S274 (EMBL:AL096844) (234 aa) fasta scores: E(): 1.3e-42%2C 51.93%25 id in 233 aa gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=TW459 TW460 TW460 TW460 496780 497955 - putative glycosyltransferase Similar to Methanosarcina mazei glycosyltransferase mm1142 SWALL:AAM30838 (EMBL:AE013343) (379 aa) fasta scores: E(): 3.6e-24%2C 29.59%25 id in 392 aa%2C and to Arabidopsis thaliana sulfolipid synthase Sqd2 SWALL:Q8S4F6 (EMBL:AF454354) (510 aa) fasta scores: E(): 2.8e-11%2C 27.91%25 id in 283 aa gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=TW460 TW461 TW461 TW461 498160 498927 - putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO0973 or SCM11.28 SWALL:Q9RIT4 (EMBL:AL133278) (419 aa) fasta scores: E(): 2.9e-09%2C 28.63%25 id in 234 aa gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=TW461 TW462 TW462 def def 499172 499777 + peptide deformylase Similar to Thermus thermophilus peptide Deformylase Def SWALL:DEF_THETH (SWALL:P43522) (192 aa) fasta scores: E(): 6.4e-15%2C 38.69%25 id in 168 aa%2C and to Mycobacterium leprae peptide deformylase Def or ml1929 SWALL:DEF_MYCLE (SWALL:Q9CBI2) (197 aa) fasta scores: E(): 8.2e-20%2C 39.6%25 id in 202 aa gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=TW462 TW463 TW463 TW463 499790 500608 - probable prolipoprotein diacylglyceryl transferase. gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=TW463 TW464 TW464 pgl pgl 500720 501478 + 6-phosphogluconolactonase Similar to Mycobacterium tuberculosis 6-phosphogluconolactonase Pgl or DevB or Rv1445c or mt1492 or mtcy493.09 SWALL:6PGL_MYCTU (SWALL:O06814) (247 aa) fasta scores: E(): 8.5e-26%2C 34.41%25 id in 247 aa%2C and to Actinobacillus actinomycetemcomitans 6-phosphogluconolactonase Pgl or DevB SWALL:6PGL_ACTAC (SWALL:P70715) (232 aa) fasta scores: E(): 6.4e-17%2C 31.93%25 id in 238 aa gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=TW464 TW465 TW465 ppa1 ppa1 501475 501954 - inorganic pyrophosphatase Similar to Bacillus stearothermophilus inorganic pyrophosphatase Ppa or pmk2ppA SWALL:IPYR_BACST (SWALL:O05724) (164 aa) fasta scores: E(): 5.1e-27%2C 44.3%25 id in 158 aa gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=TW465 TW467 TW467 TW467 501957 502484 - putative membrane protein No significant database matches gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=TW467 TW468 TW468 TW468 502797 503162 - conserved hypothetical protein Similar to Streptomyces coelicolor putative electron transport protein SCO1943 or SCC54.03c SWALL:Q9Z522 (EMBL:AL035591) (111 aa) fasta scores: E(): 3.2e-11%2C 44.34%25 id in 106 aa gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=TW468 TW469 TW469 secG secG 503234 503530 - protein-export membrane protein SecG Similar to Streptomyces coelicolor protein-export membrane protein SecG or SCO1944 or SCC54.04c SWALL:SECG_STRCO (SWALL:Q9Z521) (102 aa) fasta scores: E(): 7.6e-10%2C 50.66%25 id in 75 aa%2C and to Escherichia coli protein-export membrane protein SecG or b3175 or z4537 or ecs4054 SWALL:SECG_ECOLI (SWALL:P33582) (110 aa) fasta scores: E(): 0.22%2C 32.83%25 id in 67 aa gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=TW469 TW470 TW470 tpiA tpiA 503561 504442 - triosephosphate isomerase Similar to Corynebacterium glutamicum triosephosphate isomerase TpiA or Tpi or cgl1586 SWALL:TPIS_CORGL (SWALL:P19583) (259 aa) fasta scores: E(): 1e-15%2C 35%25 id in 280 aa gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=TW470 TW471 TW471 pgk pgk 504444 505631 - phosphoglycerate kinase Similar to Streptomyces coelicolor phosphoglycerate kinase Pgk or SCO1946 or SCC54.06c SWALL:PGK_STRCO (SWALL:Q9Z519) (403 aa) fasta scores: E(): 2.7e-64%2C 47.81%25 id in 389 aa%2C and to Thermotoga maritima bifunctional Pgk/Tim [includes: phosphoglycerate kinase pgk/tpi or tm0689 SWALL:PGKT_THEMA (SWALL:P36204) (654 aa) fasta scores: E(): 1.3e-55%2C 45.47%25 id in 387 aa gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=TW471 TW472 TW472 gap gap 505638 506651 - glyceraldehyde 3-phosphate dehydrogenase Similar to Corynebacterium glutamicum glyceraldehyde 3-phosphate dehydrogenase Gap or cgl1588 SWALL:G3P_CORGL (SWALL:Q01651) (336 aa) fasta scores: E(): 2.2e-80%2C 59.58%25 id in 339 aa gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=TW472 TW473 TW473 sodA sodA 506673 507281 - superoxide dismutase Similar to Propionibacterium freudenreichii shermanii superoxide dismutase [mn/fe] sodA SWALL:SODM_PROFR (SWALL:P80293) (201 aa) fasta scores: E(): 9.6e-47%2C 61.53%25 id in 195 aa gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=TW473 TW474 TW474 TW474 507366 508325 - conserved hypothetical protein Similar to Streptomyces coelicolor WhiA SWALL:Q9S4Y1 (EMBL:AF106003) (330 aa) fasta scores: E(): 5e-40%2C 42.71%25 id in 309 aa gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=TW474 TW475 TW475 uvrC uvrC 508335 510158 - excinuclease ABC subunit C Similar to Escherichia coli excinuclease ABC subunit C UvrC or b1913 SWALL:UVRC_ECOLI (SWALL:P07028) (610 aa) fasta scores: E(): 2.9e-48%2C 32.72%25 id in 608 aa%2C and to Streptomyces coelicolor excinuclease ABC subunit C UvrC or SCO1953 or SCC54.13c SWALL:UVRC_STRCO (SWALL:Q9Z512) (728 aa) fasta scores: E(): 5.2e-62%2C 36.6%25 id in 672 aa gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=TW475 TW476 TW476 uvrA uvrA 510167 513013 - excinuclease ABC subunit A Similar to Escherichia coli excinuclease ABC subunit A UvrA or DinE or b4058 SWALL:UVRA_ECOLI (SWALL:P07671) (940 aa) fasta scores: E(): 2e-109%2C 48.39%25 id in 965 aa gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=TW476 TW477 TW477 uvrB uvrB 513025 515058 - excinuclease ABC subunit B Similar to Escherichia coli excinuclease ABC subunit B UvrB or b0779 or z0998 or ecs0857 SWALL:UVRB_ECOLI (SWALL:P07025) (673 aa) fasta scores: E(): 3.1e-133%2C 55.19%25 id in 674 aa gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=TW477 TW478 TW478 coaE coaE 515051 515791 - dephospho-CoA kinase Similar to Bacillus subtilis dephospho-CoA kinase CoaE SWALL:COAE_BACSU (SWALL:O34932) (197 aa) fasta scores: E(): 1.3e-06%2C 30.15%25 id in 199 aa gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=TW478 TW479 TW479 rpsA rpsA 515795 517216 - 30s ribosomal protein S1 Similar to Escherichia coli 30s ribosomal protein S1 RpsA or SsyF or b0911 or z1257 or ecs0994 SWALL:RS1_ECOLI (SWALL:P02349) (557 aa) fasta scores: E(): 2.4e-47%2C 42.69%25 id in 349 aa%2C and to Streptomyces coelicolor 30s ribosomal protein S1 RpsA or SCO1998 or SC7H2.12c SWALL:Q9S2K5 (EMBL:AL109732) (502 aa) fasta scores: E(): 3.1e-103%2C 58.33%25 id in 468 aa gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=TW479 TW480 TW480 polA polA 517394 518464 - DNA polymerase I Similar to Mycobacterium tuberculosis DNA polymerase I PolA or Rv1629 or mt1665 or mtcy01b2.21 SWALL:DPO1_MYCTU (SWALL:Q07700) (904 aa) fasta scores: E(): 1.4e-36%2C 42.91%25 id in 268 aa gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=TW480 TW481 TW481 TW481 518480 519088 - putative two-component system response regulator Similar to Streptomyces coelicolor putative response regulator SCO2013 or SC7H2.27c SWALL:Q9S2J0 (EMBL:AL109732) (218 aa) fasta scores: E(): 3.7e-35%2C 53.51%25 id in 185 aa%2C and to Streptomyces coelicolor AbsA2 or SCO3226 or SCE8.19 SWALL:Q53894 (EMBL:U51332) (222 aa) fasta scores: E(): 7.4e-11%2C 43.47%25 id in 115 aa%2C and to Bacillus subtilis chemotaxis protein CheY homolog or CheB SWALL:CHEY_BACSU (SWALL:P24072) (119 aa) fasta scores: E(): 1.2e-10%2C 38.59%25 id in 114 aa gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=TW481 TW482 TW482 pyk pyk 519320 520735 - pyruvate kinase Similar to Corynebacterium glutamicum pyruvate kinase Pyk or cgl2089 SWALL:KPYK_CORGL (SWALL:Q46078) (475 aa) fasta scores: E(): 1.1e-83%2C 50.63%25 id in 470 aa gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=TW482 TW483 TW483 TW483 520865 521758 - NLP/P60-family protein C-terminal region similar to those from proteins of undefined function eg. Clostridium acetobutylicum starch degrading enzyme precursor SWALL:Q45834 (EMBL:X70334) (503 aa) fasta scores: E(): 2.7e-11%2C 38.51%25 id in 148 aa gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=TW483 TW484 TW484 dnaG dnaG 522062 523873 - DNA primase Similar to Mycobacterium smegmatis DNA primase DnaG SWALL:PRIM_MYCSM (SWALL:O52200) (636 aa) fasta scores: E(): 1.1e-43%2C 36.34%25 id in 630 aa%2C and to Escherichia coli DNA primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): 5.1e-37%2C 34.7%25 id in 438 aa gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=TW484 TW485 TW485 dgt dgt 523870 525309 - deoxyguanosinetriphosphate triphosphohydrolase Similar to Escherichia coli deoxyguanosinetriphosphate triphosphohydrolase Dgt or b0160 SWALL:DGTP_ECOLI (SWALL:P15723) (504 aa) fasta scores: E(): 0.016%2C 26.32%25 id in 452 aa%2C and to Mycobacterium smegmatis deoxyguanosinetriphosphate triphosphohydrolase-like protein Dgt SWALL:DGT1_MYCSM (SWALL:O52199) (428 aa) fasta scores: E(): 2.9e-33%2C 42.72%25 id in 440 aa gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=TW485 TW486 TW486 uppS2 uppS2 525319 526068 - undecaprenyl pyrophosphate synthetase Similar to Mycobacterium tuberculosis undecaprenyl pyrophosphate synthetase UppS or Rv2361c or mt2430 or mtcy27.19 SWALL:UPPS_MYCTU (SWALL:O05837) (296 aa) fasta scores: E(): 2.8e-53%2C 54.89%25 id in 235 aa%2C and to Micrococcus luteus undecaprenyl pyrophosphate synthetase UppS SWALL:UPPS_MICLU (SWALL:O82827) (249 aa) fasta scores: E(): 1.8e-33%2C 38.03%25 id in 234 aa gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=TW486 TW487 TW487 recO recO 526096 526839 - DNA repair protein RecO Similar to Escherichia coli DNA repair protein RecO or b2565 or z3846 or ecs3431 SWALL:RECO_ECOLI (SWALL:P15027) (242 aa) fasta scores: E(): 0.051%2C 26.27%25 id in 236 aa%2C and to Streptomyces coelicolor DNA repair protein RecO or SCO2510 or SCC121.13c SWALL:RECO_STRCO (SWALL:Q9L2H3) (251 aa) fasta scores: E(): 9.8e-24%2C 38.36%25 id in 245 aa gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=TW487 TW488 TW488 era era 526847 527752 - GTP-binding protein Similar to Streptococcus gordonii Challis GTP-binding protein Era or Sgg SWALL:ERA_STRGC (SWALL:O24756) (299 aa) fasta scores: E(): 2e-31%2C 38.81%25 id in 286 aa gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=TW488 TW489 TW489 TW489 527739 528254 - conserved hypothetical protein Similar to Mycobacterium leprae hypothetical protein Ml0628 or b1937_f1_21 SWALL:YN67_MYCLE (SWALL:Q49752) (178 aa) fasta scores: E(): 3.3e-15%2C 35.61%25 id in 146 aa gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=TW489 TW490 TW490 TW490 528251 528574 - conserved hypothetical protein Similar to Synechocystis sp. hypothetical hit-like protein Slr1234 SWALL:YHIT_SYNY3 (SWALL:P73481) (114 aa) fasta scores: E(): 6.7e-15%2C 43.13%25 id in 102 aa gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=TW490 TW491 TW491 TW491 528610 529317 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2372c or mt2441 or mtcy27.08 SWALL:YN72_MYCTU (SWALL:O05826) (262 aa) fasta scores: E(): 9.5e-16%2C 30.24%25 id in 248 aa gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=TW491 TW492 TW492 dnaJ1 dnaJ1 529351 530397 - chaperone protein DnaJ Similar to Escherichia coli chaperone protein DnaJ or GroP or b0015 SWALL:DNAJ_ECOLI (SWALL:P08622) (375 aa) fasta scores: E(): 1.7e-31%2C 34.85%25 id in 373 aa gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=TW492 TW493 TW493 TW493 530842 531444 - hypothetical protein No significant database matches gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=TW493 TW494 TW494 lepA lepA 531458 533263 - GTP-binding protein LepA Similar to Escherichia coli GTP-binding protein LepA or b2569 or z3851 or ecs3435 SWALL:LEPA_ECOLI (SWALL:P07682) (599 aa) fasta scores: E(): 5.7e-114%2C 49.83%25 id in 592 aa gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=TW494 TW495 TW495 rpsT rpsT 533550 533837 + 30s ribosomal protein S20 Similar to Escherichia coli 30s ribosomal protein S20 RpsT or b0023 or z0027 or ecs0026 SWALL:RS20_ECOLI (SWALL:P02378) (86 aa) fasta scores: E(): 0.0017%2C 34.14%25 id in 82 aa%2C and to Streptomyces coelicolor 30s ribosomal protein S20 RpsT or SCO2563 or SCC123.01 SWALL:RS20_STRCO (SWALL:Q9RDM3) (88 aa) fasta scores: E(): 1.7e-14%2C 62.06%25 id in 87 aa gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=TW495 TW496 TW496 relA relA 533898 536120 - GTP pyrophosphokinase Similar to Corynebacterium glutamicum GTP pyrophosphokinase RelA or cgl1653 SWALL:RELA_CORGL (SWALL:O87331) (760 aa) fasta scores: E(): 2e-124%2C 43.98%25 id in 732 aa%2C and to Escherichia coli GTP pyrophosphokinase RelA or b2784 or z4099 or ecs3644 SWALL:RELA_ECOLI (SWALL:P11585) (744 aa) fasta scores: E(): 3.3e-79%2C 34.23%25 id in 739 aa gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=TW496 TW497 TW497 TW497 536344 536976 - hypothetical protein No significant database matches gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=TW497 TW498 TW498 secF secF 537313 538281 - protein-export membrane protein SecF Similar to Streptomyces coelicolor protein-export membrane protein SecF or SCO1515 or SCL2.05c SWALL:SECF_STRCO (SWALL:Q53956) (373 aa) fasta scores: E(): 2.7e-43%2C 42.15%25 id in 325 aa%2C and to Escherichia coli protein-export membrane protein SecF or b0409 or z0508 or ecs0460 SWALL:SECF_ECOLI (SWALL:P19674) (323 aa) fasta scores: E(): 4.9e-19%2C 29.41%25 id in 323 aa gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=TW498 TW499 TW499 secD secD 538281 539903 - protein-export membrane protein SecD Similar to Streptomyces coelicolor protein-export membrane protein SecD or SCO1516 or SCL2.06c SWALL:SECD_STRCO (SWALL:Q53955) (570 aa) fasta scores: E(): 3e-52%2C 40.21%25 id in 552 aa%2C and to Corynebacterium glutamicum SecD SWALL:Q9AE07 (EMBL:AF038651) (637 aa) fasta scores: E(): 7.8e-32%2C 31.01%25 id in 590 aa gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=TW499 TW500 TW500 TW500 539982 540473 - putative secreted protein Similar to Streptomyces coelicolor putative secreted protein SCO1517 or SCL2.07c SWALL:Q9L292 (EMBL:AL137778) (169 aa) fasta scores: E(): 0.038%2C 25.74%25 id in 167 aa gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=TW500 TW501 TW501 ruvB ruvB 540495 541490 - holliday junction DNA helicase RuvB Similar to Escherichia coli holliday junction DNA helicase RuvB or b1860 or z2912 or ecs2570 SWALL:RUVB_ECOLI (SWALL:P08577) (336 aa) fasta scores: E(): 3.6e-57%2C 54.4%25 id in 318 aa gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=TW501 TW502 TW502 ruvA ruvA 541501 542025 - holliday junction DNA helicase RuvA Similar to Thermus thermophilus holliday junction DNA helicase RuvA SWALL:RUVA_THETH (SWALL:Q9F1Q3) (191 aa) fasta scores: E(): 1e-15%2C 38.23%25 id in 170 aa gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=TW502 TW503 TW503 ruvC ruvC 542124 542675 - crossover junction endodeoxyribonuclease RuvC Similar to Escherichia coli crossover junction endodeoxyribonuclease RuvC or b1863 or z2915 or ecs2573 SWALL:RUVC_ECOLI (SWALL:P24239) (172 aa) fasta scores: E(): 2e-07%2C 27.38%25 id in 168 aa%2C and to Mycobacterium leprae crossover junction endodeoxyribonuclease RuvC or ml0481 or b1177_c3_226 SWALL:RUVC_MYCLE (SWALL:P40834) (188 aa) fasta scores: E(): 1.6e-20%2C 40%25 id in 185 aa gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=TW503 TW504 TW504 TW504 542666 543424 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2603c or mt2678 or mtci270a.02 SWALL:YQ03_MYCTU (SWALL:O33214) (251 aa) fasta scores: E(): 5.5e-43%2C 52.01%25 id in 248 aa gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=TW504 TW505 TW505 TW505 543467 544033 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO1522 or SCL2.12c SWALL:Q9L287 (EMBL:AL137778) (202 aa) fasta scores: E(): 1.2e-25%2C 47.02%25 id in 185 aa gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=TW505 TW506 TW506 TW506 544033 544896 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2606c or mt2681 or mtcy1a10.27 SWALL:YQ06_MYCTU (SWALL:O06208) (299 aa) fasta scores: E(): 1.6e-67%2C 68.51%25 id in 289 aa gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=TW506 TW507 TW507 TW507 544909 545445 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical HIT family protein SCL2.20c or SCO1530 SWALL:Q9L279 (EMBL:AL137778) (186 aa) fasta scores: E(): 7.6e-35%2C 50%25 id in 168 aa gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=TW507 TW508 TW508 thrS thrS 545454 547376 - threonyl-tRNA synthetase Similar to Thermus thermophilus threonyl-tRNA synthetase ThrS SWALL:SYT_THETH (SWALL:P56881) (659 aa) fasta scores: E(): 1e-99%2C 42.13%25 id in 617 aa gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=TW508 TW509 TW509 glnA glnA 547499 548923 + glutamine synthetase Similar to Escherichia coli glutamine synthetase GlnA or b3870 or z5406 or ecs4792 SWALL:GLNA_ECOLI (SWALL:P06711) (468 aa) fasta scores: E(): 2.2e-89%2C 48.62%25 id in 471 aa gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=TW509 TW510 TW510 panB panB 548929 549738 + 3-methyl-2-oxobutanoate hydroxymethyltransferase Similar to Escherichia coli 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB or b0134 SWALL:PANB_ECOLI (SWALL:P31057) (264 aa) fasta scores: E(): 3.1e-30%2C 38.4%25 id in 263 aa gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=TW510 TW511 TW511 map map 549738 550607 + methionine aminopeptidase Similar to Escherichia coli methionine aminopeptidase Map or b0168 or z0178 or ecs0170 SWALL:AMPM_ECOLI (SWALL:P07906) (264 aa) fasta scores: E(): 1.6e-41%2C 46.15%25 id in 247 aa%2C and to Streptomyces coelicolor methionine aminopeptidase Map3 or SCO2266 or SCC75A.12 SWALL:Q9RKR2 (EMBL:AL133220) (285 aa) fasta scores: E(): 1.2e-64%2C 57.34%25 id in 279 aa gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=TW511 TW512 TW512 TW512 551089 551790 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2229c or mt2288 or mtcy427.10C SWALL:YM29_MYCTU (SWALL:Q10513) (245 aa) fasta scores: E(): 5.6e-06%2C 24.78%25 id in 234 aa gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=TW512 TW513 TW513 TW513 551783 552622 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO2301 or SCC30.09c SWALL:YN01_STRCO (SWALL:Q9L012) (285 aa) fasta scores: E(): 4.7e-28%2C 36.74%25 id in 283 aa gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=TW513 TW514 TW514 TW514 552783 553241 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2238c or mt2298 or mtcy427.19C SWALL:YM38_MYCTU (SWALL:Q10520) (153 aa) fasta scores: E(): 4.5e-19%2C 43.33%25 id in 150 aa gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=TW514 TW515 TW515 aceE aceE 553337 556156 + pyruvate dehydrogenase E1 component Similar to Escherichia coli pyruvate dehydrogenase E1 component AceE or b0114 or z0124 or ecs0118 SWALL:ODP1_ECOLI (SWALL:P06958) (886 aa) fasta scores: E(): 3.9e-128%2C 45.16%25 id in 921 aa%2C and to Streptomyces coelicolor pyruvate dehydrogenase E1 component SCO2371 or SCC8A.29 SWALL:Q9KY19 (EMBL:AL356892) (918 aa) fasta scores: E(): 1.1e-198%2C 53.66%25 id in 928 aa. Has an insertion in the N-terminal region relative to homologues. gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=TW515 TW516 TW516 fabD fabD 556140 557159 + malonyl coa:acyl carrier protein malonyltransferase Similar to Streptomyces coelicolor malonyl CoA:acyl carrier protein malonyltransferase FabD or SCO2387 or SC4A7.15 SWALL:P72391 (EMBL:X86475) (316 aa) fasta scores: E(): 3.4e-29%2C 43.08%25 id in 318 aa gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=TW516 TW517 TW517 fabH fabH 557173 558141 + 3-oxoacyl-[acyl-carrier-protein] synthase III Similar to Mycobacterium tuberculosis 3-oxoacyl-[acyl-carrier-protein] synthase III FabH or Rv0533c or mt0557 or mtcy25d10.12C SWALL:FABH_MYCTU (SWALL:O06399) (335 aa) fasta scores: E(): 3e-43%2C 43.51%25 id in 324 aa%2C and to Streptomyces glaucescens FabH protein fabH SWALL:Q54206 (EMBL:L43074) (333 aa) fasta scores: E(): 1.5e-47%2C 45.34%25 id in 322 aa gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=TW517 TW518 TW518 acp acp 558218 558466 + acyl carrier protein Similar to Streptomyces coelicolor acyl carrier protein AcpP or SCO2389 or SC4A7.17 SWALL:P72393 (EMBL:X86475) (82 aa) fasta scores: E(): 2.3e-11%2C 46.34%25 id in 82 aa gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=TW518 TW519 TW519 fabF fabF 558467 559702 + 3-oxoacyl-[acyl-carrier-protein] synthase II Similar to Synechocystis sp. 3-oxoacyl-[acyl-carrier-protein] synthase II FabF or sll1069 SWALL:FABF_SYNY3 (SWALL:P73283) (416 aa) fasta scores: E(): 9.8e-58%2C 42.05%25 id in 409 aa gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=TW519 TW520 TW520 TW520 559792 560274 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO2391 or SC4A7.19c SWALL:Q9RDP6 (EMBL:AL133423) (164 aa) fasta scores: E(): 4e-22%2C 41.33%25 id in 150 aa gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=TW520 TW521 TW521 qcrB qcrB 560351 561961 - ubiquinol-cytochrome C reductase cytochrome B subunit Similar to Streptomyces coelicolor ubiquinol-cytochrome C reductase cytochrome B subunit QcrB or SCO2148 or SC6G10.21c SWALL:QCRB_STRCO (SWALL:Q9X806) (545 aa) fasta scores: E(): 1.2e-113%2C 54.15%25 id in 517 aa%2C and to Corynebacterium glutamicum cytochrome B subunit CytB or QcrB SWALL:Q9F481 (EMBL:AB047851) (539 aa) fasta scores: E(): 2.1e-92%2C 50.33%25 id in 455 aa gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=TW521 TW522 TW522 qcrA qcrA 561961 562944 - ubiquinol-cytochrome C reductase iron-sulfur subunit Similar to Streptomyces coelicolor ubiquinol-cytochrome C reductase iron-sulfur subunit QcrA or SCO2149 or SC6G10.22c SWALL:QCRA_STRCO (SWALL:Q9X807) (353 aa) fasta scores: E(): 2.2e-55%2C 45.84%25 id in 325 aa%2C and to Corynebacterium glutamicum rieske iron-sulfur protein QcrA or cgl2190 SWALL:BAB99583 (EMBL:AJ306418) (408 aa) fasta scores: E(): 1.6e-21%2C 31.75%25 id in 381 aa gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=TW522 TW523 TW523 qcrC qcrC 562998 563822 - cytochrome C heme-binding subunit Similar to Streptomyces coelicolor cytochrome C heme-binding subunit QcrC or SCO2150 or SC6G10.23c SWALL:Q9X808 (EMBL:AL049497) (269 aa) fasta scores: E(): 6.1e-43%2C 49.03%25 id in 259 aa%2C and to Corynebacterium glutamicum cytochrome cc1 subunit qcrC SWALL:Q9F483 (EMBL:AB047851) (283 aa) fasta scores: E(): 2e-20%2C 43.79%25 id in 274 aa gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=TW523 TW524 TW524 ctaE ctaE 563822 564445 - cytochrome c oxidase subunit III Similar to Corynebacterium glutamicum cytochrome c oxidase subunit III CtaE or cgl2192 SWALL:Q9AEL8 (EMBL:AJ306418) (205 aa) fasta scores: E(): 7.2e-24%2C 47.93%25 id in 194 aa gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=TW524 TW525 TW525 TW525 564534 564953 - putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO2154 or SC6G10.27c SWALL:Q9X812 (EMBL:AL049497) (132 aa) fasta scores: E(): 2.7e-10%2C 33.07%25 id in 130 aa gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=TW525 TW526 TW526 ctaD ctaD 564974 566605 - cytochrome c oxidase subunit I Similar to Corynebacterium glutamicum cytochrome c oxidase subunit I CtaD SWALL:Q93HZ5 (EMBL:AB052748) (584 aa) fasta scores: E(): 2.6e-138%2C 63.18%25 id in 527 aa gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=TW526 TW527 TW527 ctaC ctaC 566617 567489 - putative cytochrome c oxidase subunit II Similar to Paracoccus denitrificans cytochrome c oxidase polypeptide II precursor CtaC or CtaB or CoiI SWALL:COX2_PARDE (SWALL:P08306) (298 aa) fasta scores: E(): 1.3e-17%2C 26.49%25 id in 268 aa gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=TW527 TW528 TW528 TW528 567559 567903 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO2161 or SC6G10.34c SWALL:Q9X819 (EMBL:AL049497) (118 aa) fasta scores: E(): 6.3e-29%2C 70.27%25 id in 111 aa gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=TW528 TW529 TW529 TW529 567920 569260 - putative peptidase Similar to Streptomyces coelicolor putative peptidase SCO1074 or SCG22.20 SWALL:Q9K425 (EMBL:AL359779) (451 aa) fasta scores: E(): 4.9e-47%2C 37.09%25 id in 434 aa gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=TW529 TW530 TW530 TW530 569392 569913 + putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO2169 or SC5F7.32 SWALL:Q9S2R7 (EMBL:AL096872) (251 aa) fasta scores: E(): 5e-15%2C 36.14%25 id in 166 aa gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=TW530 TW531 TW531 rnhA rnhA 569929 570414 + ribonuclease HI Similar to Escherichia coli ribonuclease HI RnhA or Rnh or DasF or HerA or SdrA or b0214 or z0239 or ecs0210 SWALL:RNH_ECOLI (SWALL:P00647) (155 aa) fasta scores: E(): 2.9e-15%2C 40.58%25 id in 138 aa gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=TW531 TW532 TW532 pyrD pyrD 570529 571521 - dihydroorotate dehydrogenase Similar to Escherichia coli dihydroorotate dehydrogenase PyrD or b0945 or z1294 or ecs1029 SWALL:PYRD_ECOLI (SWALL:P05021) (336 aa) fasta scores: E(): 3.7e-35%2C 37.88%25 id in 322 aa%2C and to Streptomyces coelicolor dihydroorotate dehydrogenase PyrD or SCO1482 or SC9C5.06c SWALL:Q9KXR7 (EMBL:AL357523) (368 aa) fasta scores: E(): 1.7e-45%2C 45.58%25 id in 340 aa gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=TW532 TW533 TW533 TW533 571543 571986 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv2718c or mt2791 or mtcy05a6.39C SWALL:YR18_MYCTU (SWALL:O07217) (154 aa) fasta scores: E(): 7.5e-31%2C 56.55%25 id in 145 aa gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=TW533 TW534 TW534 TW534 571987 572463 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv1830 or mt1879 or mtcy1a11.13C SWALL:YI30_MYCTU (SWALL:Q50603) (225 aa) fasta scores: E(): 3.4e-28%2C 60.28%25 id in 141 aa gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=TW534 TW535 TW535 TW535 572506 573183 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO1383 or SC1A8a.03c SWALL:Q9KZP9 (EMBL:AL353861) (246 aa) fasta scores: E(): 2.9e-11%2C 35.02%25 id in 197 aa gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=TW535 TW536 TW536 TW536 573189 573620 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv1827 or mt1875 or mtcy1a11.16C SWALL:YI27_MYCTU (SWALL:Q50606) (162 aa) fasta scores: E(): 1.2e-22%2C 64.35%25 id in 101 aa gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=TW536 TW537 TW537 TW537 573636 574154 - putative integral membrane protein No significant database matches gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=TW537 TW539 TW539 TW539 574357 574854 + hypothetical protein Doubtful CDS. No significant database matches gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=TW539 TW540 TW540 ftsQ ftsQ 574920 575669 - cell division protein Similar to Streptomyces coelicolor cell division protein FtsQ or SCO2083 or SC4A10.16c SWALL:FTSQ_STRCO (SWALL:P45518) (264 aa) fasta scores: E(): 0.011%2C 26.33%25 id in 243 aa%2C and to Corynebacterium glutamicum cell division protein ftsq homolog ftsq or divb or cgl2156 SWALL:FTSQ_CORGL (SWALL:P94336) (222 aa) fasta scores: E(): 9.8e-11%2C 26.26%25 id in 217 aa gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=TW540 TW541 TW541 murC murC 575696 577123 - UDP-N-acetylmuramate--alanine ligase Similar to Streptomyces coelicolor UDP-N-acetylmuramate--alanine ligase MurC or SCO6060 or SC9B1.07 SWALL:MURC_STRCO (SWALL:Q9X827) (462 aa) fasta scores: E(): 1.1e-48%2C 35.83%25 id in 466 aa%2C and to Escherichia coli UDP-N-acetylmuramate--alanine ligase MurC or b0091 SWALL:MURC_ECOLI (SWALL:P17952) (491 aa) fasta scores: E(): 4.7e-41%2C 31.78%25 id in 475 aa gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=TW541 TW542 TW542 murG murG 577126 578196 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase Similar to Streptomyces coelicolor UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase MurG or SCO2084 or SC4A10.17C SWALL:MURG_STRCO (SWALL:Q9ZBA5) (364 aa) fasta scores: E(): 4e-42%2C 38.42%25 id in 367 aa%2C and to Escherichia coli UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase MurG or b0090 SWALL:MURG_ECOLI (SWALL:P17443) (354 aa) fasta scores: E(): 3.3e-26%2C 34.46%25 id in 354 aa gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=TW542 TW543 TW543 ftsW ftsW 578196 579308 - cell division protein FtsW Similar to Streptomyces coelicolor cell division protein FtsW or SCO2085 or SC4A10.18c SWALL:Q9ZBA6 (EMBL:U10879) (456 aa) fasta scores: E(): 2.7e-36%2C 35.22%25 id in 369 aa%2C and to Escherichia coli cell division protein FtsW or b0089 or z0099 or ecs0093 SWALL:FTSW_ECOLI (SWALL:P16457) (414 aa) fasta scores: E(): 5e-27%2C 30.79%25 id in 354 aa gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=TW543 TW544 TW544 murD murD 579308 580750 - UDP-N-acetylmuramoylalanine--D-glutamate ligase Similar to Streptomyces coelicolor UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD SWALL:Q9ZBA7 (EMBL:U10879) (221 aa) fasta scores: E(): 1e-18%2C 35%25 id in 220 aa%2C and to Escherichia coli UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD or b0088 SWALL:MURD_ECOLI (SWALL:P14900) (437 aa) fasta scores: E(): 8.2e-11%2C 30.21%25 id in 470 aa gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=TW544 TW545 TW545 murE murE 580752 582281 - UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase Similar to Streptomyces coelicolor UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelateligase MurE or SCO2089 or SC4A10.22c SWALL:MURE_STRCO (SWALL:Q9S2W7) (506 aa) fasta scores: E(): 2.7e-44%2C 33.52%25 id in 528 aa%2C and to Escherichia coli UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelateligase MurE or b0085 SWALL:MURE_ECOLI (SWALL:P22188) (494 aa) fasta scores: E(): 2.9e-29%2C 29.76%25 id in 467 aa gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=TW545 TW546 TW546 mraY mraY 582278 583387 - phospho-N-acetylmuramoyl-pentapeptide-transferase Similar to Streptomyces coelicolor phospho-N-acetylmuramoyl-pentapeptide-transferase MraY or MurX or SCO2087 or SC4A10.20c SWALL:MRAY_STRCO (SWALL:P56833) (363 aa) fasta scores: E(): 4.9e-55%2C 47.45%25 id in 373 aa%2C and to Escherichia coli phospho-N-acetylmuramoyl-pentapeptide-transferase MraY or MurX or b0087 SWALL:MRAY_ECOLI (SWALL:P15876) (360 aa) fasta scores: E(): 7.4e-25%2C 36.03%25 id in 358 aa gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=TW546 TW547 TW547 murF murF 583384 584778 - probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase Similar to Streptomyces toyocaensis probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase MurF or MurX SWALL:MURF_STRTO (SWALL:O33804) (443 aa) fasta scores: E(): 2.5e-30%2C 31.44%25 id in 442 aa%2C and to Escherichia coli UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase MurF or Mra or b0086 SWALL:MURF_ECOLI (SWALL:P11880) (452 aa) fasta scores: E(): 3.3e-28%2C 31.41%25 id in 382 aa gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=TW547 TW548 TW548 pbp pbp 584800 586545 - penicillin-binding protein Similar to Bacillus subtilis penicillin-binding protein 2b PbpB SWALL:PBPB_BACSU (SWALL:Q07868) (716 aa) fasta scores: E(): 2.4e-32%2C 27.68%25 id in 596 aa%2C and to Streptomyces coelicolor FtsI SWALL:Q9Z5V7 (EMBL:AF123319) (651 aa) fasta scores: E(): 8.1e-44%2C 30.62%25 id in 604 aa gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=TW548 TW549 TW549 TW549 586618 587073 - putative membrane protein Similar to Streptomyces coelicolor putative membrane protein SCO2091 or SC4A10.24c SWALL:Q9S2W5 (EMBL:AL109663) (206 aa) fasta scores: E(): 0.0016%2C 34.44%25 id in 90 aa gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=TW549 TW550 TW550 mraW mraW 587070 588023 - S-adenosyl-methyltransferase Similar to Streptococcus pneumoniae S-adenosyl-methyltransferase MraW or sp0334 SWALL:MRAW_STRPN (SWALL:Q97SK1) (316 aa) fasta scores: E(): 2.9e-39%2C 40.06%25 id in 312 aa%2C and to Escherichia coli S-adenosyl-methyltransferase MraW or b0082 or z0092 or ecs0086 SWALL:MRAW_ECOLI (SWALL:P18595) (313 aa) fasta scores: E(): 4e-34%2C 39.68%25 id in 315 aa gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=TW550 TW551 TW551 mraZ mraZ 588073 588501 - conserved hypothetical protein MraZ Similar to Bacillus halodurans protein MraZ or bh2576 SWALL:MRAZ_BACHD (SWALL:Q9K9R9) (143 aa) fasta scores: E(): 3.3e-20%2C 41%25 id in 139 aa%2C and to Escherichia coli protein MraZ or b0081 SWALL:MRAZ_ECOLI (SWALL:P22186) (152 aa) fasta scores: E(): 2.6e-05%2C 29.77%25 id in 131 aa gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=TW551 TW552 TW552 TW552 588579 589076 - WiSP family protein No significant database matches gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=TW552 TW553 TW553 TW553 589163 589504 - putative membrane protein No significant database matches gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=TW553 TW554 TW554 TW554 589617 590681 + putative polyprenyl diphosphate synthase Similar to Brevibacterium linens ggpp synthase CrtE SWALL:Q9KK76 (EMBL:AF139916) (385 aa) fasta scores: E(): 2.2e-08%2C 28.82%25 id in 333 aa%2C and to Aeropyrum pernix farnesylgeranyl diphosphate synthase Fgs SWALL:Q9UWR6 (EMBL:AB025791) (318 aa) fasta scores: E(): 2.3e-07%2C 28.42%25 id in 299 aa gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=TW554 TW555 TW555 TW555 590691 592496 + putative eukaryotic-type serine/threonine protein kinase Similar to Streptomyces coelicolor eukaryotic-type protain kinase PkaF SWALL:Q9ZNB3 (EMBL:AB019394) (629 aa) fasta scores: E(): 2.5e-38%2C 33.07%25 id in 638 aa gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=TW555 TW556 TW556 aroH aroH 592766 594133 - phospho-2-dehydro-3-deoxyheptonate aldolase Similar to Streptomyces coelicolor phospho-2-dehydro-3-deoxyheptonate aldolase AroH or SCO2115 or SC6E10.09c SWALL:AROF_STRCO (SWALL:P80574) (449 aa) fasta scores: E(): 3.3e-106%2C 59.17%25 id in 436 aa gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=TW556 TW557 TW557 TW557 594117 594782 - putative acyltransferase Similar to Streptomyces coelicolor putative acyltransferase SCO1228 or 2SCG1.03 SWALL:Q9FCD9 (EMBL:AL391014) (240 aa) fasta scores: E(): 7.8e-41%2C 47.03%25 id in 219 aa%2C and to Limnanthes alba 1-acyl-sn-glycerol-3-phosphate acyltransferase SWALL:PLSC_LIMAL (SWALL:Q42868) (281 aa) fasta scores: E(): 2.4e-07%2C 30%25 id in 160 aa gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=TW557 TW558 TW558 glk glk 594860 595777 - glucokinase Similar to Streptomyces coelicolor glucokinase GlkA or Glk or SCO2126 or SC6E10.20c SWALL:GLK_STRCO (SWALL:P40184) (317 aa) fasta scores: E(): 9.5e-28%2C 39.22%25 id in 311 aa gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=TW558 TW559 TW559 TW559 595831 598080 - WiSP family protein No significant database matches. Probably membrane spanning. Contains 4 x 100bp (approx) repeat sequence in the C-terminal region from residue 324-736 approx. gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=TW559 TW560 TW560 TW560 598196 598759 - conserved putative integral membrane protein (BioY-family) Similar to Rhizobium meliloti hypothetical transmembrane protein Smc00964 SWALL:Q92RI3 (EMBL:AL591785) (187 aa) fasta scores: E(): 1.6e-25%2C 49.42%25 id in 174 aa%2C and to Bacillus sphaericus biotin synthesis associated protein BioY SWALL:BIOY_BACSH (SWALL:P22819) (196 aa) fasta scores: E(): 4.6e-08%2C 30.05%25 id in 183 aa gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=TW560 TW561 TW561 TW561 598981 599292 - WiSP family protein No significant database matches gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=TW561 TW562 TW562 TW562 599498 600619 - putative oxidoreductase Weak but full length similarity to many oxidoreductases eg. Deinococcus radiodurans pyridine nucleotide-disulphide oxidoreductase%2C class II dr0412 SWALL:Q9RXA3 (EMBL:AE001901) (324 aa) fasta scores: E(): 7.1e-07%2C 23.26%25 id in 361 aa%2C and Borrelia burgdorferi thioredoxin reductase TrxB or bb0515 SWALL:TRXB_BORBU (SWALL:P94284) (326 aa) fasta scores: E(): 0.4%2C 22.43%25 id in 361 aa gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=TW562 TW563 TW563 gltX gltX 600620 602062 - glutamyl-tRNA synthetase Similar to Mycobacterium tuberculosis glutamyl-tRNA synthetase GltX or GltS or Rv2992c or mt3070 or mtv012.06C SWALL:SYE_MYCTU (SWALL:O53241) (490 aa) fasta scores: E(): 1.1e-104%2C 54.62%25 id in 476 aa%2C and to Bacillus stearothermophilus glutamyl-tRNA synthetase GltX SWALL:SYE_BACST (SWALL:P22249) (489 aa) fasta scores: E(): 3.8e-53%2C 34.84%25 id in 485 aa gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=TW563 TW564 TW564 ilvE ilvE 602111 603196 - branched-chain amino acid aminotransferase Similar to Mycobacterium tuberculosis probable branched-chain amino acid aminotransferase IlvE or Rv2210c or mt2266 or mtcy190.21C SWALL:ILVE_MYCTU (SWALL:Q10399) (368 aa) fasta scores: E(): 1.2e-62%2C 47.01%25 id in 368 aa%2C and to Rattus norvegicus branched-chain amino acid aminotransferase%2C cytosolic BcaT1 SWALL:BCAT_RAT (SWALL:P54690) (411 aa) fasta scores: E(): 2.8e-39%2C 35.38%25 id in 373 aa gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=TW564 TW565 TW565 ilvC ilvC 603297 604298 - ketol-acid reductoisomerase Similar to Streptomyces avermitilis ketol-acid reductoisomerase IlvC SWALL:ILVC_STRAW (SWALL:Q59818) (333 aa) fasta scores: E(): 1.5e-74%2C 59.25%25 id in 324 aa gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=TW565 TW566 TW566 ilvN ilvN 604367 604609 - acetohydroxy acid synthase%2C small subunit Similar to Corynebacterium glutamicum acetohydroxy acid synthase%2C small subunit IlvN or LivS or cgl1272 SWALL:Q57091 (EMBL:L09232) (172 aa) fasta scores: E(): 1.9e-06%2C 45.12%25 id in 82 aa gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=TW566 TW567 TW567 ilvB ilvB 604602 606347 - acetolactate synthase Similar to Mycobacterium avium acetolactate synthase ilvB SWALL:ILVB_MYCAV (SWALL:Q59498) (621 aa) fasta scores: E(): 4.5e-127%2C 57.38%25 id in 582 aa. Note truncated N-terminus relative to homologues. gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=TW567 TW568 TW568 ilvD ilvD 606392 608101 - dihydroxy-acid dehydratase Similar to Mycobacterium tuberculosis dihydroxy-acid dehydratase IlvD or Rv0189c or mt0199 or mtci28.28C SWALL:ILVD_MYCTU (SWALL:O07433) (575 aa) fasta scores: E(): 1.2e-153%2C 71.5%25 id in 558 aa%2C and to Saccharomyces cerevisiae dihydroxy-acid dehydratase%2C mitochondrial precursor Ilv3 or yjr016c or j1450 SWALL:ILV3_YEAST (SWALL:P39522) (585 aa) fasta scores: E(): 1.3e-93%2C 46.69%25 id in 559 aa%2C and to Lactococcus lactis dihydroxy-acid dehydratase IlvD or ll1223 SWALL:ILVD_LACLA (SWALL:Q02139) (570 aa) fasta scores: E(): 5.8e-84%2C 43.26%25 id in 564 aa gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=TW568 TW569 TW569 ksgA ksgA 616652 617908 - dimethyladenosine transferase Localised similarity to a family of proteins which includes Escherichia coli dimethyladenosine transferase KsgA%2C a protein involved in ribosome function. C-terminal region similar to Escherichia coli dimethyladenosine transferase KsgA or rsma or b0051 SWALL:KSGA_ECOLI (SWALL:P06992) (273 aa) fasta scores: E(): 2e-11%2C 34.19%25 id in 155 aa. N-terminal region contains ribosomal RNA adenine dimethylases signature similar to Mycobacterium tuberculosis KsgA or Rv1010 or mtci237.27 or mt1039 SWALL:O05595 (EMBL:Z94752) blast scores: E(): 9e-27%2C score: 304 35%25 id. gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=TW569 TW570 TW570 TW570 617905 622575 - WiSP family protein No significant database matches. 4x degenerate repeat at residue 650-1066. Exact 4x repeat at residue 1198-1555. Threonine-rich region residue 111-1171. gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=TW570 TW571 TW571 smpB smpB 623081 623716 - ssrA-binding protein Similar to Streptomyces coelicolor ssrA-binding protein SmpB or SCO2966 or SCE59.25c SWALL:Q9L1S9 (EMBL:AL138851) (159 aa) fasta scores: E(): 2.9e-23%2C 47.02%25 id in 151 aa%2C and to Mycobacterium tuberculosis ssra-binding protein smpb or rv3100c or mt3184 or mtcy164.11C SWALL:SSRP_MYCTU (SWALL:P96294) (160 aa) fasta scores: E(): 6.8e-21%2C 44.21%25 id in 147 aa gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=TW571 TW572 TW572 ftsX ftsX 623728 624639 - cell division protein FtsX Similar to Mycobacterium tuberculosis cell division protein FtsX homolog or Rv3101c or mt3185 or mtcy164.12C SWALL:FTSX_MYCTU (SWALL:P96293) (297 aa) fasta scores: E(): 6.8e-15%2C 27.96%25 id in 304 aa%2C and to Streptomyces coelicolor putative cell division protein SCO2968 or SCE59.27c SWALL:Q9L1S7 (EMBL:AL138851) (305 aa) fasta scores: E(): 6.1e-37%2C 37.7%25 id in 305 aa gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=TW572 TW573 TW573 ftsE ftsE 624654 626954 - cell division ATP-binding protein FtsE Similar to Escherichia coli cell division ATP-binding protein FtsE or b3463 or z4837 or ecs4312 SWALL:FTSE_ECOLI (SWALL:P10115) (222 aa) fasta scores: E(): 4.8e-30%2C 50%25 id in 214 aa%2C and to Mycobacterium tuberculosis FtsE SWALL:P96292 (EMBL:X70031) (195 aa) fasta scores: E(): 5e-31%2C 58.42%25 id in 190 aa gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=TW573 TW574 TW574 prfB prfB 627148 628278 - peptide chain release factor 2 Similar to Bacillus subtilis peptide chain release factor 2 PrfB SWALL:RF2_BACSU (SWALL:P28367) (366 aa) fasta scores: E(): 5.7e-50%2C 40.33%25 id in 362 aa gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=TW574 TW575 TW575 TW575 628384 629523 + putative integral membrane transport protein Weakly similar to Listeria monocytogenes hypothetical protein Lmo1250 SWALL:Q8Y7M4 (EMBL:AL591978) (401 aa) fasta scores: E(): 4.4e-09%2C 21.61%25 id in 384 aa%2C and to Escherichia coli tetracycline resistance protein%2C class B TetA SWALL:TCR2_ECOLI (SWALL:P02980) (401 aa) fasta scores: E(): 1.3e-06%2C 21.82%25 id in 339 aa gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=TW575 TW576 TW576 pyrB pyrB 634418 635638 - aspartate carbamoyltransferase Similar to Methanococcus jannaschii aspartate carbamoyltransferase PyrB or mj1581 SWALL:PYRB_METJA (SWALL:Q58976) (306 aa) fasta scores: E(): 2.6e-39%2C 43.59%25 id in 312 aa%2C and to Burkholderia cepacia aspartate transcarbamoylase PyrB SWALL:Q9F9H3 (EMBL:AF192346) (431 aa) fasta scores: E(): 2e-55%2C 42.1%25 id in 399 aa%2C and to C-terminal region of Mesocricetus auratus Cad protein [includes: glutamine-dependent carbamoyl-phosphate synthase Cad SWALL:PYR1_MESAU (SWALL:P08955) (2225 aa) fasta scores: E(): 4.8e-40%2C 40.38%25 id in 312 aa gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=TW576 TW577 TW577 TW577 644368 644865 - putative membrane protein No significant database matches gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=TW577 TW578 TW578 TW578 644981 645415 - putative membrane/secreted protein No significant database matches gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=TW578 TW579 TW579 TW579 645415 645834 - putative membrane protein Weakly similar to Rhizobium loti hypothetical protein Mll7596 mll7596 SWALL:Q985N7 (EMBL:AP003012) (148 aa) fasta scores: E(): 0.017%2C 29.41%25 id in 119 aa gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=TW579 TW580 TW580 TW580 645831 646019 - putative membrane protein No significant database matches gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=TW580 TW581 TW581 TW581 646082 646978 - putative membrane protein No significant database matches gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=TW581 TW582 TW582 TW582 646975 647859 - putative membrane protein No significant database matches gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=TW582 TW583 TW583 TW583 647813 649147 - TadA-like protein Similar to Pseudomonas aeruginosa probable type II secretion system protein Pa4302 SWALL:Q9HW98 (EMBL:AE004846) (421 aa) fasta scores: E(): 1.5e-39%2C 38.72%25 id in 346 aa%2C and to Actinobacillus actinomycetemcomitans tight adherance protein TadA SWALL:Q9XC06 (EMBL:AF152598) (426 aa) fasta scores: E(): 7.5e-36%2C 35.04%25 id in 371 aa gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=TW583 TW584 TW584 TW584 655551 657386 + putative peptidoglycan synthesis protein Similar to Mycobacterium tuberculosis GlmU or Rv1018c or mt1046 or mtcy10g2.31 SWALL:P96382 (EMBL:Z92539) (513 aa) fasta scores: E(): 1.9e-42%2C 33%25 id in 606 aa%2C and to Bacillus subtilis UDP-N-acetylglucosamine pyrophosphorylase GcaD or Tms or Tms-26 SWALL:GCAD_BACSU (SWALL:P14192) (456 aa) fasta scores: E(): 4e-35%2C 28.04%25 id in 592 aa%2C and to Escherichia coli bifunctional GlmU protein [includes: UDP-N-acetylglucosamine pyrophosphorylase GlmU or b3730 or z5228 or ecs4672 SWALL:GLMU_ECOLI (SWALL:P17114) (456 aa) fasta scores: E(): 1.3e-25%2C 27.48%25 id in 593 aa gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=TW584 TW585 TW585 prsA prsA 657383 658429 + ribose-phosphate pyrophosphokinase Similar to Escherichia coli ribose-phosphate pyrophosphokinase PrsA or Prs or b1207 or z1978 or ecs1712 SWALL:KPRS_ECOLI (SWALL:P08330) (314 aa) fasta scores: E(): 1.4e-45%2C 44.9%25 id in 314 aa%2C and to Mycobacterium tuberculosis PrsA or Rv1017c or mtcy10g2.32 or mt1045 SWALL:P96383 (EMBL:Z92539) (326 aa) fasta scores: E(): 1.2e-60%2C 53.65%25 id in 315 aa gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=TW585 TW586 TW586 ispG ispG 658576 659718 + 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase Similar to Escherichia coli 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase IspG or GcpE or b2515 or z3778 or ecs3377 SWALL:ISPG_ECOLI (SWALL:P27433) (372 aa) fasta scores: E(): 1.8e-53%2C 44.28%25 id in 341 aa%2C and to Streptomyces coelicolor 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase 2 IspG2 or GcpE2 or SCO5696 or SC5H4.20 SWALL:ISG2_STRCO (SWALL:Q9KYR9) (385 aa) fasta scores: E(): 2e-103%2C 71.65%25 id in 381 aa gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=TW586 TW587 TW587 TW587 659799 660323 - putative membrane protein No significant database matches gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=TW587 TW588 TW588 proS proS 660811 662616 + prolyl-tRNA synthetase Similar to Escherichia coli prolyl-tRNA synthetase ProS or DrpA or b0194 SWALL:SYP_ECOLI (SWALL:P16659) (572 aa) fasta scores: E(): 2.9e-38%2C 37%25 id in 600 aa%2C and to Mycobacterium tuberculosis prolyl-tRNA synthetase ProS or Rv2845c or mt2911 or mtcy24a1.12 SWALL:SYP_MYCTU (SWALL:O05814) (582 aa) fasta scores: E(): 2.1e-55%2C 45.81%25 id in 598 aa gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=TW588 TW589 TW589 mfd mfd 662858 666604 - transcription-repair coupling factor Similar to Escherichia coli transcription-repair coupling factor Mfd or b1114 SWALL:MFD_ECOLI (SWALL:P30958) (1148 aa) fasta scores: E(): 1.1e-100%2C 32.02%25 id in 1168 aa%2C and to Streptomyces coelicolor putative transcriptional-repair coupling factor SCO3109 or SCE41.18c SWALL:Q9F2P1 (EMBL:AL442120) (1184 aa) fasta scores: E(): 3.8e-136%2C 39.79%25 id in 1161 aa gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=TW589 TW590 TW590 TW590 667703 669169 - putative membrane protein Weakly similar to other putative membrane proteins eg. Vibrio cholerae hypothetical protein Vc2671 SWALL:Q9KNR0 (EMBL:AE004332) (460 aa) fasta scores: E(): 8.7e-09%2C 23.44%25 id in 482 aa gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=TW590 TW591 TW591 TW591 669363 670142 - putative membrane protein Weakly similar to other putative membrane proteins eg. Archaeoglobus fulgidus daunorubicin resistance membrane protein af1883 SWALL:O28396 (EMBL:AE000972) (251 aa) fasta scores: E(): 0.0039%2C 24.51%25 id in 257 aa gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=TW591 TW592 TW592 TW592 670145 671137 - putative ABC transporter ATP-binding subunit Similar to many putative ABC transporter ATP-binding proteins eg. Caulobacter crescentus ABC transporter%2C ATP-binding protein cc1147 SWALL:Q9A947 (EMBL:AE005793) (328 aa) fasta scores: E(): 4.3e-20%2C 32.18%25 id in 289 aa gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=TW592 TW593 TW593 TW593 671258 671836 - putative secreted protein No significant database matches gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=TW593 TW594 TW594 TW594 671969 672631 - ABC transporter ATP-binding protein Similar to Fusobacterium nucleatum ABC transporter ATP-binding protein Fn1352 SWALL:Q8RDY9 (EMBL:AE010640) (224 aa) fasta scores: E(): 7.7e-18%2C 35.61%25 id in 219 aa%2C and to Escherichia coli cell division ATP-binding protein FtsE or b3463 or z4837 or ecs4312 SWALL:FTSE_ECOLI (SWALL:P10115) (222 aa) fasta scores: E(): 8.4e-15%2C 32.86%25 id in 216 aa gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=TW594 TW595 TW595 TW595 672632 673525 - putative membrane protein No significant database matches gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=TW595 TW596 TW596 TW596 673535 674707 - putative membrane protein Similar to Pseudomonas aeruginosa hypothetical protein Pa2988 SWALL:Q9HZL6 (EMBL:AE004724) (416 aa) fasta scores: E(): 0.00022%2C 24.59%25 id in 374 aa gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=TW596 TW597 TW597 TW597 674949 675440 + putative integral membrane protein No significant database matches gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=TW597 TW598 TW598 TW598 675726 675839 + hypothetical protein Doubtful CDS. No significant database matches gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=TW598 TW599 TW599 TW599 675851 675955 + hypothetical protein Doubtful CDS. No significant database matches gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=TW599 TW600 TW600 TW600 676009 676287 + hypothetical protein Doubtful CDS. No significant database matches. Contains variable length tandem repeat. gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=TW600 TW602 TW602 TW602 682344 683117 - putative membrane protein Doubtful CDS. No significant database matches gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=TW602 TW603 TW603 tyrS tyrS 683275 684690 - tyrosyl-tRNA synthetase Similar to Escherichia coli tyrosyl-tRNA synthetase TyrS or b1637 or z2650 or ecs2346 SWALL:SYY_ECOLI (SWALL:P00951) (423 aa) fasta scores: E(): 6.5e-61%2C 48.43%25 id in 351 aa%2C and to Streptomyces coelicolor tyrosyl-tRNA synthetase TyrS or SCO1818 or SCI8.03 SWALL:Q9RJ50 (EMBL:AL132644) (422 aa) fasta scores: E(): 1.2e-78%2C 49.35%25 id in 464 aa gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=TW603 TW604 TW604 pheT pheT 684889 687774 - phenylalanyl-tRNA synthetase beta chain Similar to Escherichia coli phenylalanyl-tRNA synthetase beta chain PheT or b1713 SWALL:SYFB_ECOLI (SWALL:P07395) (795 aa) fasta scores: E(): 2.6e-45%2C 28.75%25 id in 845 aa%2C and to Mycobacterium tuberculosis phenylalanyl-tRNA synthetase beta chain PheT or Rv1650 or mt1688 or mtcy06h11.15 SWALL:SYFB_MYCTU (SWALL:P94985) (831 aa) fasta scores: E(): 1.1e-50%2C 32.78%25 id in 976 aa gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=TW604 TW605 TW605 pheS pheS 687857 688867 - phenylalanyl-tRNA synthetase alpha chain Similar to Escherichia coli phenylalanyl-tRNA synthetase alpha chain PheS or b1714 SWALL:SYFA_ECOLI (SWALL:P08312) (327 aa) fasta scores: E(): 5.7e-45%2C 38.88%25 id in 324 aa%2C and to Mycobacterium tuberculosis phenylalanyl-tRNA synthetase alpha chain PheS or Rv1649 or mt1687 or mtcy06h11.14 SWALL:SYFA_MYCTU (SWALL:P94984) (341 aa) fasta scores: E(): 4.3e-60%2C 47.54%25 id in 326 aa gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=TW605 TW606 TW606 rplT rplT 689251 689661 - 50s ribosomal protein L20 Similar to Escherichia coli 50s ribosomal protein L20 RplT or PdzA or b1716 or z2745 or ecs2423 or stm1336 or sty1775 SWALL:RL20_ECOLI (SWALL:P02421) (117 aa) fasta scores: E(): 2.7e-20%2C 53.91%25 id in 115 aa gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=TW606 TW607 TW607 rpmI rpmI 689691 689888 - 50s ribosomal protein L35 Similar to Escherichia coli 50s ribosomal protein L35 RpmI or b1717 or z2746 or ecs2424 or stm1335 or sty1776 SWALL:RL35_ECOLI (SWALL:P07085) (64 aa) fasta scores: E(): 0.0013%2C 39.62%25 id in 53 aa%2C and to Streptomyces coelicolor 50s ribosomal protein L35 RpmI or SCO1599 or SCI35.21c SWALL:RL35_STRCO (SWALL:O88059) (64 aa) fasta scores: E(): 9.6e-14%2C 62.5%25 id in 64 aa gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=TW607 TW608 TW608 infC infC 689959 690507 - translation initiation factor IF-3 Similar to Escherichia coli translation initiation factor IF-3 InfC or Fit or b1718 or z2747 or ecs2425 SWALL:IF3_ECOLI (SWALL:P02999) (180 aa) fasta scores: E(): 1.2e-23%2C 44.84%25 id in 165 aa gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=TW608 TW610 TW610 metT metT 691441 693909 - putative methionine synthase Similar to Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase CimS or at5g17920 or mpi7.9 SWALL:METE_ARATH (SWALL:O50008) (765 aa) fasta scores: E(): 3.5e-41%2C 35.44%25 id in 680 aa%2C and to Thermotoga maritima 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE or tm1286 SWALL:METE_THEMA (SWALL:Q9X112) (734 aa) fasta scores: E(): 1.5e-48%2C 33.65%25 id in 731 aa gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=TW610 TW611 TW611 TW611 694598 694954 - putative membrane protein No significant database matches gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=TW611 TW612 TW612 TW612 694956 697502 - conserved hypothetical protein containing putative glycosyltransferase domain Similar to Clostridium acetobutylicum glycosyltransferase domain containing protein Cac2327 SWALL:Q97GN9 (EMBL:AE007733) (1044 aa) fasta scores: E(): 2.9e-67%2C 33.03%25 id in 666 aa C-terminal region similar to Clostridium acetobutylicum diverged glycosyltransferase domain containing protein Cac2326 SWALL:Q97GP0 (EMBL:AE007733) (436 aa) fasta scores: E(): 1.6e-59%2C 37.91%25 id in 451 aa. N-terminal region contains match to Pfam entry PF00534 Glycosyl transferases group 1 and is similar to Porphyromonas gingivalis orf1%2C orf2 and orf3 genes SWALL:P72199 (EMBL:U60208) (322 aa) fasta scores: E(): 0.36%2C 24.01%25 id in 279 aa gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=TW612 TW613 TW613 rbfA rbfA 697504 698094 - ribosome-binding factor A Similar to Escherichia coli ribosome-binding factor A RbfA or p15b or b3167 or z4528 or ecs4048 SWALL:RBFA_ECOLI (SWALL:P09170) (132 aa) fasta scores: E(): 0.0053%2C 27.82%25 id in 115 aa%2C and to Corynebacterium glutamicum ribosome-binding factor A cgl1984 SWALL:BAB99377 (EMBL:AP005280) (149 aa) fasta scores: E(): 1.2e-10%2C 38.25%25 id in 149 aa%2C and to Streptococcus agalactiae ribosome binding factor A RbfA SWALL:Q9ZF19 (EMBL:AJ003164) (122 aa) fasta scores: E(): 0.0027%2C 31.57%25 id in 114 aa gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=TW613 TW614 TW614 infB infB 698201 700612 - translation initiation factor IF-2 Similar to Bacillus stearothermophilus translation initiation factor IF-2 InfB SWALL:IF2_BACST (SWALL:P04766) (741 aa) fasta scores: E(): 1.5e-79%2C 44.84%25 id in 796 aa gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=TW614 TW615 TW615 nusA nusA 700744 701703 - N utilization transcriptional termination/antitermination factor Similar to Escherichia coli N utilization substance protein A NusA or b3169 or z4530 or ecs4050 SWALL:NUSA_ECOLI (SWALL:P03003) (495 aa) fasta scores: E(): 5.1e-25%2C 29.24%25 id in 342 aa%2C and to Thermus thermophilus N utilization substance protein A homolog NusA SWALL:NUSA_THETH (SWALL:P48514) (387 aa) fasta scores: E(): 2.4e-31%2C 39.2%25 id in 278 aa gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=TW615 TW616 TW616 TW616 702163 702450 - hypothetical protein Doubtful CDS. No significant database matches gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=TW616 TW617 TW617 TW617 702560 703195 - putative integral membrane protein Similar to Corynebacterium glutamicum uncharacterized Acr cgl0233 SWALL:BAB97626 (EMBL:AP005274) (246 aa) fasta scores: E(): 1.8e-21%2C 35.64%25 id in 202 aa%2C and to Chlamydia pneumoniae conserved hypothetical bacterial membrane protein cpn1045 or cpj1045 SWALL:Q9Z6L4 (EMBL:AE001685) (230 aa) fasta scores: E(): 3.2e-11%2C 28.98%25 id in 207 aa gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=TW617 TW618 TW618 ppa2 ppa2 703479 703958 - inorganic pyrophosphatase Similar to Escherichia coli inorganic pyrophosphatase Ppa or b4226 or z5837 or ecs5204 SWALL:IPYR_ECO57 (SWALL:P17288) (175 aa) fasta scores: E(): 4.4e-26%2C 48.12%25 id in 160 aa gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=TW618 TW619 TW619 TW619 703961 704488 - putative membrane protein No significant database matches gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=TW619 TW620 TW620 tgt tgt 704564 705778 + queuine tRNA-ribosyltransferase Similar to Escherichia coli queuine tRNA-ribosyltransferase Tgt or b0406 or z0505 or ecs0457 SWALL:TGT_ECO57 (SWALL:P19675) (375 aa) fasta scores: E(): 1.2e-33%2C 37.77%25 id in 368 aa%2C and to Zymomonas mobilis queuine tRNA-ribosyltransferase Tgt SWALL:TGT_ZYMMO (SWALL:P28720) (385 aa) fasta scores: E(): 6.2e-35%2C 37.05%25 id in 394 aa gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=TW620 TW621 TW621 TW621 705782 706750 - proline/alanine-rich repetetive membrane anchored protein No significant database matches gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=TW621 TW622 TW622 TW622 707270 708502 - putative NLP/P60 family secreted protein C-terminal region similar to others eg. Streptomyces coelicolor putative NLP/P60 family secreted protein SCO4561 or SCD16A.22 SWALL:Q9XAQ3 (EMBL:AL078618) (277 aa) fasta scores: E(): 3.5e-11%2C 33.33%25 id in 207 aa gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=TW622 TW623 TW623 TW623 709006 709233 - hypothetical protein Doubtful CDS. No significant database matches gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=TW623 TW624 TW624 TW624 709750 710373 - putative membrane protein No significant database matches. Pro/Ala/Ser/Thr-rich. gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=TW624 TW625 TW625 TW625 710513 712633 - WiSP family protein No significant database matches. Pro/Ala/Ser/Thr-rich. gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=TW625 TW626 TW626 miaA miaA 712844 713704 - tRNA delta (2)-isopentenylpyrophosphate transferase Similar to Escherichia coli tRNA delta (2)-isopentenylpyrophosphate transferase MiaA or TrpX or b4171 SWALL:MIAA_SHIFL (SWALL:P16384) (316 aa) fasta scores: E(): 2.9e-18%2C 29.49%25 id in 278 aa%2C and to Streptomyces coelicolor trna delta (2)-isopentenylpyrophosphate transferase MiaA or SCO5791 or SC4H2.12 SWALL:MIAA_STRCO (SWALL:O69967) (312 aa) fasta scores: E(): 7.8e-35%2C 42.59%25 id in 270 aa gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=TW626 TW627 TW627 TW627 713825 715237 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5787 or SC4H2.08 SWALL:O69963 (EMBL:AL022268) (505 aa) fasta scores: E(): 2.5e-120%2C 65.12%25 id in 476 aa%2C and to Escherichia coli hypothetical protein YleA or b0661 or z0810 or ecs0699 SWALL:YLEA_ECO57 (SWALL:P77645) (474 aa) fasta scores: E(): 3.6e-59%2C 41.04%25 id in 441 aa gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=TW627 TW628 TW628 recA recA 715252 716565 - recombinase A Similar to Streptomyces lividans RecA protein SWALL:RECA_STRLI (SWALL:P48294) (374 aa) fasta scores: E(): 1.5e-86%2C 70.27%25 id in 370 aa gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=TW628 TW629 TW629 pgsA pgsA 716760 717365 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Similar to Bacillus subtilis CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA SWALL:PGSA_BACSU (SWALL:P46322) (193 aa) fasta scores: E(): 3.8e-11%2C 40.54%25 id in 148 aa gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=TW629 TW630 TW630 TW630 717488 717835 - hypothetical protein No significant database matches gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=TW630 TW631 TW631 TW631 717893 720118 - FtsK/SpoIIIE homologue Similar to Streptomyces coelicolor Ftsk homolog SCO5750 or SC7C7.05 SWALL:O86810 (EMBL:AL031031) (929 aa) fasta scores: E(): 1.9e-111%2C 46.58%25 id in 848 aa%2C and to Bacillus subtilis stage III sporulation protein E SpoIIIE SWALL:SP3E_BACSU (SWALL:P21458) (787 aa) fasta scores: E(): 1e-79%2C 46.84%25 id in 491 aa gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=TW631 TW632 TW632 TW632 720115 721752 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5745 or SC9A10.09 SWALL:O86842 (EMBL:AL031260) (561 aa) fasta scores: E(): 1.8e-112%2C 53.95%25 id in 543 aa gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=TW632 TW633 TW633 TW633 721883 722605 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO5743 or SC9A10.07 SWALL:O86840 (EMBL:AL031260) (246 aa) fasta scores: E(): 4.4e-51%2C 59.82%25 id in 234 aa%2C and to Dictyostelium discoideum Thy1 protein ThyA or Thy1 SWALL:THY1_DICDI (SWALL:P15808) (260 aa) fasta scores: E(): 4.5e-14%2C 32.36%25 id in 207 aa gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=TW633 TW634 TW634 TW634 722670 723827 - putative membrane protein No significant database matches gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=TW634 TW636 TW636 TW636 724543 724776 + putative WhiB-family regulator Similar to Streptomyces coelicolor hypothetical protein WblE or SCO5240 or 2SC7G11.02c SWALL:Q9X952 (EMBL:AJ239087) (85 aa) fasta scores: E(): 2.3e-20%2C 64.28%25 id in 84 aa%2C and to Streptomyces griseocarneus WhiB-STV protein SWALL:Q06387 (EMBL:X68708) (87 aa) fasta scores: E(): 1.4e-08%2C 43.83%25 id in 73 aa%2C and to Mycobacterium smegmatis WhmD SWALL:Q9S426 (EMBL:AF164439) (129 aa) fasta scores: E(): 1.4e-08%2C 45.07%25 id in 71 aa gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=TW636 TW637 TW637 TW637 725478 725921 - hypothetical protein Doubtful CDS. No significant database matches. Pro/Ala-rich. gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=TW637 TW638 TW638 TW638 725920 726630 + putative integral membrane protein Similar to Streptomyces coelicolor possible membrane protein SCO3411 or SCE9.18c SWALL:Q9X8J1 (EMBL:AL049841) (303 aa) fasta scores: E(): 7.9e-28%2C 41.03%25 id in 212 aa%2C and to Escherichia coli DedA protein or b2317 or z3579 or ecs3201 SWALL:DEDA_ECO57 (SWALL:P09548) (219 aa) fasta scores: E(): 2.2e-21%2C 34.27%25 id in 213 aa gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=TW638 TW639 TW639 TW639 726584 727165 - conserved hypothetical protein Similar to Streptomyces coelicolor Ham1 protein homolog SCO2902 or SCE19A.02c SWALL:HAM1_STRCO (SWALL:Q9S2H9) (200 aa) fasta scores: E(): 2e-25%2C 42.78%25 id in 194 aa gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=TW639 TW640 TW640 rph rph 727191 727961 - ribonuclease PH Similar to Escherichia coli ribonuclease PH Rph or b3643 SWALL:RNPH_ECOLI (SWALL:P03842) (238 aa) fasta scores: E(): 5.3e-42%2C 49.57%25 id in 236 aa%2C and to Bifidobacterium longum NCC2705 probable ribonuclease PH bl0286 SWALL:AAN24126 (EMBL:AE014647) (258 aa) fasta scores: E(): 3.3e-46%2C 54.39%25 id in 239 aa gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=TW640 TW641 TW641 TW641 727985 729313 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO2917 or SCE19A.17 SWALL:Q9S2G4 (EMBL:AL096852) (448 aa) fasta scores: E(): 3.7e-64%2C 48.91%25 id in 415 aa. Note overlap with downstream tRNA. gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=TW641 TW642 TW642 TW642 729543 731621 - WiSP family protein No significant database matches. Rep6. Frameshifted at potentially variable C(11) tract after aa 24 gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=TW642 TW643 TW643 TW643 731763 733025 - putative membrane protein No significant database matches. Note possible downstream alternative start codons. gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=TW643 TW644 TW644 TW644 733276 736152 - putative integral membrane protein Similar to Streptomyces coelicolor hypothetical protein SCO5204 or 2SC3B6.28 or SC7E4.01 SWALL:YGA4_STRCO (SWALL:Q9FCI4) (1000 aa) fasta scores: E(): 6.2e-99%2C 40.08%25 id in 978 aa%2C and to Bifidobacterium longum NCC2705 narrowly conserved hypothetical protein bl1029 SWALL:AAN24835 (EMBL:AE014726) (1066 aa) fasta scores: E(): 2.9e-86%2C 42.56%25 id in 1015 aa gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=TW644 TW645 TW645 TW645 736186 737220 - putative secreted protein Similar to Corynebacterium glutamicum predicted secreted protein containing a PDZ domain cgl0783 SWALL:Q8NS96 (EMBL:AP005276) (350 aa) fasta scores: E(): 5.2e-19%2C 29.67%25 id in 310 aa gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=TW645 TW646 TW646 pdhD pdhD 737310 738668 - dihydrolipoamide dehydrogenase Similar to Bacillus stearothermophilus dihydrolipoamide dehydrogenase PdhD SWALL:DLD1_BACST (SWALL:P11959) (470 aa) fasta scores: E(): 4e-32%2C 28.26%25 id in 460 aa%2C and to Corynebacterium glutamicum dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes cgl2003 SWALL:Q8NP23 (EMBL:AP005280) (465 aa) fasta scores: E(): 8e-36%2C 40.42%25 id in 470 aa gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=TW646 TW647 TW647 pyc pyc 738673 742068 - pyruvate carboxylase Similar to Mycobacterium smegmatis pyruvate carboxylase Pyc SWALL:Q9F843 (EMBL:AF262949) (1127 aa) fasta scores: E(): 0%2C 59.06%25 id in 1131 aa%2C and to Saccharomyces cerevisiae pyruvate carboxylase 1 Pyc1 or Pyv or ygl062W SWALL:PYC1_YEAST (SWALL:P11154) (1178 aa) fasta scores: E(): 2.9e-168%2C 47.21%25 id in 1150 aa gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=TW647 TW648 TW648 parA2 parA2 742132 742905 + chromosome partitioning protein Similar to Caulobacter crescentus chromosome partitioning protein ParA or cc3753 SWALL:PARA_CAUCR (SWALL:O05189) (267 aa) fasta scores: E(): 2.8e-13%2C 30.34%25 id in 234 aa%2C and to Streptomyces coelicolor ParA SWALL:Q9RFM1 (EMBL:AF187159) (357 aa) fasta scores: E(): 2.8e-11%2C 29.2%25 id in 226 aa gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=TW648 TW649 TW649 TW649 742928 743734 - putative integral membrane protein No significant database matches gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=TW649 TW651 TW651 TW651 743942 745456 - putative histidine kinase Similar to many predicted histidine kinases eg. Bifidobacterium longum NCC2705 histidine kinase-like protein bl1012 SWALL:AAN24820 (EMBL:AE014724) (510 aa) fasta scores: E(): 6.6e-53%2C 35.72%25 id in 459 aa gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=TW651 TW652 TW652 gabT gabT 746050 747348 - 4-aminobutyrate aminotransferase Similar to Escherichia coli 4-aminobutyrate aminotransferase GabT or b2662 SWALL:GABT_ECOLI (SWALL:P22256) (426 aa) fasta scores: E(): 2.6e-54%2C 38.88%25 id in 414 aa%2C and to Streptomyces coelicolor putative 4-aminobutyrate aminotransferase GabT or SCO5676 or SC8B7.02 SWALL:O86823 (EMBL:AL031225) (444 aa) fasta scores: E(): 5.6e-65%2C 46.92%25 id in 439 aa gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=TW652 TW653 TW653 folD folD 747349 748224 - FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5)%3B methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Similar to Bacillus subtilis FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5)%3B methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] FolD SWALL:FOLD_BACSU (SWALL:P54382) (283 aa) fasta scores: E(): 1.9e-37%2C 42.4%25 id in 283 aa%2C and to Streptomyces coelicolor bifunctional protein FolD or SCO4824 or SC2A6.09 SWALL:Q9K3J6 (EMBL:AL389898) (284 aa) fasta scores: E(): 1.9e-46%2C 46.45%25 id in 282 aa gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=TW653 TW655 TW655 glyA glyA 748409 749695 - serine hydroxymethyltransferase Similar to Methylobacterium extorquens serine hydroxymethyltransferase GlyA SWALL:GLYA_METEX (SWALL:P50435) (434 aa) fasta scores: E(): 1.3e-75%2C 54.06%25 id in 394 aa gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=TW655 TW656 TW656 TW656 749768 750331 - conserved hypothetical protein Similar to Clostridium perfringens hypothetical protein Cpe1730 SWALL:Q8XJM6 (EMBL:AP003191) (185 aa) fasta scores: E(): 1.7e-16%2C 38.17%25 id in 186 aa%2C and to Escherichia coli putative methylase YhhF or b3465 SWALL:YHHF_ECOLI (SWALL:P10120) (198 aa) fasta scores: E(): 1.1e-11%2C 36.26%25 id in 182 aa gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=TW656 TW658 TW658 gcvH gcvH 750975 751340 - probable glycine cleavage system H protein Similar to Streptomyces coelicolor probable glycine cleavage system H protein GcvH or SCO5471 or SC2A11.05c SWALL:GCSH_STRCO (SWALL:O86566) (125 aa) fasta scores: E(): 3.4e-16%2C 44.26%25 id in 122 aa gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=TW658 TW659 TW659 gcvT gcvT 751396 752466 - aminomethyltransferase gcvT Similar to Escherichia coli aminomethyltransferase GcvT or b2905 SWALL:GCST_ECOLI (SWALL:P27248) (363 aa) fasta scores: E(): 2.1e-27%2C 34.9%25 id in 361 aa%2C and to Streptomyces coelicolor probable aminomethyltransferase GcvT or SCO5472 or SC2A11.06c SWALL:GCST_STRCO (SWALL:O86567) (372 aa) fasta scores: E(): 1.9e-39%2C 43.81%25 id in 372 aa gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=TW659 TW661 TW661 TW661 752772 753806 - conserved ATP/GTP binding protein Similar to Corynebacterium glutamicum predicted GTPase cgl1032 SWALL:Q8NRL6 (EMBL:AP005277) (361 aa) fasta scores: E(): 1.4e-30%2C 55.3%25 id in 358 aa%2C and to Yersinia pestis hypothetical protein Ypo2010 SWALL:Q8ZEY5 (EMBL:AJ414151) (363 aa) fasta scores: E(): 2e-25%2C 43.17%25 id in 359 aa gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=TW661 TW662 TW662 TW662 753874 755175 + putative secreted protein Similar to Zymomonas mobilis DNA recombination protein RmuC homolog SWALL:RMUC_ZYMMO (SWALL:Q9REQ3) (448 aa) fasta scores: E(): 2.3e-22%2C 27.41%25 id in 383 aa gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=TW662 TW663 TW663 TW663 755247 755717 - putative integral membrane protein No significant database matches gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=TW663 TW664 TW664 ispH ispH 755714 756655 - IspH protein Similar to Escherichia coli IspH protein or LytB or b0029 or z0034 or ecs0032 SWALL:BAB96598 (EMBL:AY062212) (316 aa) fasta scores: E(): 2.5e-51%2C 49.83%25 id in 309 aa%2C and to Mycobacterium tuberculosis IspH protein 1 or LytB1 or Rv1110 or mt1141 or mtv017.63 SWALL:ISH1_MYCTU (SWALL:O53458) (335 aa) fasta scores: E(): 8.4e-75%2C 67.41%25 id in 310 aa gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=TW664 TW665 TW665 xseA xseA 756796 758010 + exodeoxyribonuclease VII large subunit Similar to Escherichia coli exodeoxyribonuclease VII large subunit XseA or b2509 SWALL:EX7L_ECOLI (SWALL:P04994) (456 aa) fasta scores: E(): 1.1e-20%2C 26.72%25 id in 434 aa%2C and to Streptomyces coelicolor probable exodeoxyribonuclease VII large subunit XseA or SCO5056 or SCK7.29c SWALL:EX7L_STRCO (SWALL:Q9FBM3) (402 aa) fasta scores: E(): 2.3e-50%2C 39.33%25 id in 389 aa gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=TW665 TW666 TW666 xseB xseB 758059 758424 + probable exodeoxyribonuclease VII small subunit Similar to Streptomyces coelicolor probable exodeoxyribonuclease VII small subunit XseB or SCO5055 or SCK7.28c SWALL:EX7S_STRCO (SWALL:Q9FBM4) (88 aa) fasta scores: E(): 0.0014%2C 40.62%25 id in 64 aa%2C and to Paracoccus zeaxanthinifaciens exonuclease VII small subunit XseB SWALL:CAD24424 (EMBL:AJ431697) (78 aa) fasta scores: E(): 2.7%2C 37.25%25 id in 51 aa gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=TW666 TW667 TW667 TW667 758459 759691 - putative integral membrane sugar transport protein Similar to Escherichia coli probable glucarate transporter GudP or b2789 SWALL:GUDP_ECOLI (SWALL:Q46916) (450 aa) fasta scores: E(): 2.4e-37%2C 32.04%25 id in 415 aa gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=TW667 TW668 TW668 TW668 760086 761030 - putative PfkB-family carbohydrate kinase. Similar to Haloferax sp. 2-keto-3-deoxygluconate kinase SWALL:P94803 (EMBL:U70664) (318 aa) fasta scores: E(): 3.1e-23%2C 32.43%25 id in 296 aa%2C and to Bacillus stearothermophilus 2-keto-3-deoxy-gluconate kinase KdgK SWALL:Q9ZFM1 (EMBL:AF098273) (314 aa) fasta scores: E(): 3.5e-12%2C 28.3%25 id in 265 aa gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=TW668 TW669 TW669 sgaE sgaE 761023 761682 - putative sugar isomerase Similar to Escherichia coli probable sugar isomerase SgaE or b4198 SWALL:SGAE_ECOLI (SWALL:P39306) (228 aa) fasta scores: E(): 4e-21%2C 47.95%25 id in 196 aa gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=TW669 TW670 TW670 sgaU sgaU 761688 762542 - putative sugar isomerase Similar to Escherichia coli putative hexulose-6-phosphate isomerase SgaU or b4197 SWALL:SGAU_ECOLI (SWALL:P39305) (284 aa) fasta scores: E(): 2.2e-35%2C 36.72%25 id in 275 aa gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=TW670 TW671 TW671 sgaH sgaH 762568 763248 - probable hexulose-6-phosphate synthase Similar to Escherichia coli probable hexulose-6-phosphate synthase SgaH or b4196 SWALL:SGAH_ECOLI (SWALL:P39304) (216 aa) fasta scores: E(): 9.8e-33%2C 46.75%25 id in 216 aa gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=TW671 TW672 TW672 TW672 763248 764228 - conserved hypothetical protein Similar to Mycoplasma pulmonis hypothetical protein Mypu_5930 SWALL:Q98PX6 (EMBL:AL445565) (351 aa) fasta scores: E(): 4.9e-39%2C 36.02%25 id in 322 aa gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=TW672 TW673 TW673 pth pth 764591 765151 - peptidyl-tRNA hydrolase Similar to Bacillus subtilis peptidyl-tRNA hydrolase SpoVC or Pth SWALL:PTH_BACSU (SWALL:P37470) (188 aa) fasta scores: E(): 1.6e-21%2C 41.27%25 id in 172 aa%2C and to Staphylococcus aureus peptidyl-tRNA hydrolase Pth SWALL:AAK61416 (EMBL:AY035553) (190 aa) fasta scores: E(): 5e-19%2C 37.95%25 id in 166 aa gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=TW673 TW674 TW674 TW674 765382 766143 - putative integral membrane protein No significant database matches gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=TW674 TW675 TW675 TW675 766167 766376 - hypothetical protein Doubtful CDS. No significant database matches gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=TW675 TW676 TW676 TW676 766453 766824 + putative integral membrane protein No significant database matches gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=TW676 TW677 TW677 rplY rplY 766845 767408 - 50s ribosomal protein L25 Similar to Escherichia coli 50s ribosomal protein L25 RplY or b2185 SWALL:RL25_ECOLI (SWALL:P02426) (94 aa) fasta scores: E(): 0.0016%2C 33.7%25 id in 89 aa%2C and to Mycobacterium tuberculosis probable 50s ribosomal protein L25 RplY or Rv1015c or mt1043 or mtcy10g2.34 SWALL:RL25_MYCTU (SWALL:P96385) (215 aa) fasta scores: E(): 9.5e-17%2C 38.28%25 id in 175 aa gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=TW677 TW678 TW678 pgm pgm 767545 768210 - phosphoglycerate mutase Similar to Zymomonas mobilis phosphoglycerate mutase Gpm or Pgm SWALL:PMGY_ZYMMO (SWALL:P30798) (228 aa) fasta scores: E(): 3.5e-37%2C 52.33%25 id in 214 aa gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=TW678 TW679 TW679 TW679 768256 769221 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv0811c or mtv043.03c or mt0832 SWALL:O53825 (EMBL:AL022004) (368 aa) fasta scores: E(): 2.9e-17%2C 32.1%25 id in 352 aa gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=TW679 TW680 TW680 TW680 769353 769517 - putative membrane protein Doubtful CDS. No significant database matches gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=TW680 TW681 TW681 TW681 769550 770104 - putative integral membrane protein Similar to Corynebacterium glutamicum hypothetical membrane protein Cgl0809 SWALL:Q8NS70 (EMBL:AP005276) (196 aa) fasta scores: E(): 3.4e-15%2C 41.73%25 id in 127 aa gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=TW681 TW682 TW682 TW682 770211 771188 + putative acetyltransferase Similar to Streptomyces coelicolor putative acetyltransferase SCO4151 or SCD84.18c SWALL:Q9KZV0 (EMBL:AL353816) (309 aa) fasta scores: E(): 5.2e-15%2C 31.9%25 id in 257 aa%2C and to Streptomyces lavendulae streptothricin acetyltransferase Sta SWALL:STA_STRLA (SWALL:P08457) (189 aa) fasta scores: E(): 0.58%2C 27.38%25 id in 84 aa gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=TW682 TW683 TW683 TW683 771236 772135 + conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical 34.7 kDa protein mutt1 or rv2985 or mtcy349.02c or mt3063 SWALL:P95110 (EMBL:Z83018) (317 aa) fasta scores: E(): 0.013%2C 29.66%25 id in 300 aa gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=TW683 TW684 TW684 mscL mscL 772508 773119 + large-conductance mechanosensitive channel Similar to Mycobacterium tuberculosis large-conductance mechanosensitive channel MscL or Rv0985c or mt1013 or mtv044.13C SWALL:MSCL_MYCTU (SWALL:O53898) (151 aa) fasta scores: E(): 1.2e-06%2C 37.62%25 id in 101 aa gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=TW684 TW685 TW685 TW685 773383 774351 + putative ABC-transporter periplasmic solute-binding subunit Similar to Synechocystis sp. periplasmic-binding protein MntC or sll1598 SWALL:Q55280 (EMBL:L34630) (330 aa) fasta scores: E(): 6.3e-36%2C 38.06%25 id in 289 aa gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=TW685 TW686 TW686 TW686 774394 775203 + putative ABC transporter ATP-binding subunit Similar to Synechocystis sp. manganese transport system ATP-binding protein MntA or sll1599 SWALL:MNTA_SYNY3 (SWALL:Q55281) (260 aa) fasta scores: E(): 6.6e-34%2C 46.18%25 id in 236 aa gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=TW686 TW687 TW687 TW687 775284 776138 + putative ABC transporter integral membrane subunit Similar to Synechocystis sp. manganese transport system membrane protein MntB or sll1600 SWALL:MNTB_SYNY3 (SWALL:Q55282) (306 aa) fasta scores: E(): 6.7e-40%2C 43.41%25 id in 258 aa gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=TW687 TW688 TW688 TW688 776233 778524 + WiSP family protein No significant database matches. gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=TW688 TW689 TW689 TW689 778689 779474 - putative integral membrane protein No significant database matches gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=TW689 TW690 TW690 TW690 779537 780148 + conserved hypothetical protein Similar to Aquifex aeolicus hypothetical protein Aq_1731 SWALL:O67621 (EMBL:AE000753) (186 aa) fasta scores: E(): 2.9e-10%2C 33.71%25 id in 175 aa gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=TW690 TW691 TW691 TW691 780347 783865 - conserved large hypothetical protein Weak but full length similarity to Bifidobacterium longum NCC2705 large hypothetical protein bl1552 SWALL:AAN25344 (EMBL:AE014790) (1207 aa) fasta scores: E(): 1.3e-24%2C 23.73%25 id in 1201 aa gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=TW691 TW692 TW692 TW692 784091 786109 + putative integral membrane protein Similar to Deinococcus radiodurans hypothetical protein Dr2265 SWALL:Q9RS62 (EMBL:AE002059) (725 aa) fasta scores: E(): 2.1e-42%2C 42.99%25 id in 728 aa gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=TW692 TW693 TW693 TW693 786619 787059 + putative integral membrane protein No significant database matches gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=TW693 TW694 TW694 fusA fusA 787370 789475 - elongation factor G Similar to Thermus thermophilus elongation factor G FusA or Fus SWALL:EFG_THETH (SWALL:P13551) (691 aa) fasta scores: E(): 1.5e-146%2C 59.45%25 id in 698 aa gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=TW694 TW695 TW695 rpsG rpsG 789511 789981 - 30S ribosomal protein S7 Similar to Mycobacterium smegmatis 30s ribosomal protein S7 RpsG SWALL:RS7_MYCSM (SWALL:P41193) (155 aa) fasta scores: E(): 3.1e-38%2C 66.45%25 id in 155 aa gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=TW695 TW696 TW696 rpsL rpsL 789981 790355 - 30S ribosomal protein S12 Similar to Mycobacterium tuberculosis 30s ribosomal protein S12 RpsL or Rps12 or Rv0682 or mt0710 or mtv040.10 SWALL:RS12_MYCTU (SWALL:P41196) (124 aa) fasta scores: E(): 3.6e-37%2C 81.3%25 id in 123 aa gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=TW696 TW697 TW697 TW697 790518 790790 + hypothetical protein Doubtful CDS. No significant database matches gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=TW697 TW698 TW698 TW698 791029 791394 + putative membrane protein No significant database matches gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=TW698 TW699 TW699 greA greA 791384 791872 + transcription elongation factor GreA Similar to Escherichia coli transcription elongation factor GreA or b3181 SWALL:GREA_ECOLI (SWALL:P21346) (158 aa) fasta scores: E(): 1.6e-05%2C 30.76%25 id in 143 aa%2C and to Mycobacterium tuberculosis transcription elongation factor GreA or Rv1080c or mt1111 or mtv017.33C SWALL:GREA_MYCTU (SWALL:O53428) (164 aa) fasta scores: E(): 7.4e-18%2C 42.33%25 id in 163 aa gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=TW699 TW700 TW700 tdcB tdcB 791981 793264 - threonine dehydratase Similar to Salmonella typhimurium threonine dehydratase catabolic TdcB or stm3244 SWALL:THD2_SALTY (SWALL:P11954) (329 aa) fasta scores: E(): 3.5e-20%2C 36.93%25 id in 333 aa%2C and to Streptomyces coelicolor putative amino acid deaminase SCO4962 or 2SCK31.22 SWALL:Q9EWG3 (EMBL:AL512667) (409 aa) fasta scores: E(): 2.8e-30%2C 41.66%25 id in 420 aa gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=TW700 TW701 TW701 TW701 793275 794258 - ribonucleotide-diphosphate reductase small chain Similar to Chlamydia muridarum ribonucleoside-diphosphate reductase beta chain NrdB or tc0215 SWALL:RIR2_CHLMU (SWALL:Q9PL92) (346 aa) fasta scores: E(): 3.4e-43%2C 36.39%25 id in 316 aa%2C and to Schizosaccharomyces pombe ribonucleoside-diphosphate reductase small chain Suc22 or spbc25d12.04 SWALL:RIR2_SCHPO (SWALL:P36603) (391 aa) fasta scores: E(): 1.7e-10%2C 27.47%25 id in 313 aa gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=TW701 TW702 TW702 TW702 794354 796732 - ribonucleotide-diphosphate reductase large chain Similar to White spot syndrome virus ribonucleotide reductase large subunit rr1 SWALL:Q91PK3 (EMBL:AF132669) (848 aa) fasta scores: E(): 3.8e-74%2C 32.54%25 id in 799 aa%2C and to Trypanosoma brucei brucei ribonucleoside-diphosphate reductase large chain Rnr1 SWALL:RIR1_TRYBB (SWALL:O15909) (838 aa) fasta scores: E(): 1.4e-73%2C 32.9%25 id in 778 aa gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=TW702 TW703 TW703 TW703 796846 798072 + putative integral membrane protein No significant database matches gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=TW703 TW704 TW704 TW704 798257 799102 + putative exodeoxyribonuclease Similar to Corynebacterium glutamicum exonuclease III cgl0671 SWALL:Q8NSK0 (EMBL:AP005276) (304 aa) fasta scores: E(): 1.6e-10%2C 39.87%25 id in 316 aa%2C and to Bos taurus DNA-(apurinic or apyrimidinic site) lyase ApeX1 or ApeX or Ape or Bap1 SWALL:APE1_BOVIN (SWALL:P23196) (317 aa) fasta scores: E(): 0.002%2C 28.67%25 id in 286 aa gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=TW704 TW705 TW705 trpS trpS 799092 800099 + tryptophanyl-tRNA synthetase Similar to Escherichia coli tryptophanyl-tRNA synthetase TrpS or b3384 SWALL:SYW_ECOLI (SWALL:P00954) (334 aa) fasta scores: E(): 2.8e-51%2C 44.51%25 id in 328 aa%2C and to Streptomyces coelicolor tryptophanyl-tRNA synthetase TrpS2 or SCO4839 or SC5G8.07 SWALL:Q9KZA7 (EMBL:AL353872) (339 aa) fasta scores: E(): 8.7e-65%2C 52.58%25 id in 329 aa gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=TW705 TW706 TW706 ribD ribD 800071 801186 + riboflavin biosynthesis protein RibD Similar to Escherichia coli riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (riboflavin-specific deaminase)%3B 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (htp reductase)] RibD or RibG or b0414 SWALL:RIBD_ECOLI (SWALL:P25539) (367 aa) fasta scores: E(): 4.6e-20%2C 33.52%25 id in 358 aa gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=TW706 TW707 TW707 ribE ribE 801259 801903 + riboflavin synthase alpha chain Similar to Bacillus subtilis riboflavin synthase alpha chain RibE or RibB SWALL:RISA_BACSU (SWALL:P16440) (215 aa) fasta scores: E(): 6.3e-11%2C 32.86%25 id in 213 aa%2C and to Streptococcus agalactiae hypothetical protein gbs0768 SWALL:CAD46412 (EMBL:AL766847) (216 aa) fasta scores: E(): 6.7e-13%2C 36.15%25 id in 213 aa gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=TW707 TW708 TW708 ribB ribB 801930 802577 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase Similar to Escherichia coli 3%2C4-dihydroxy-2-butanone 4-phosphate synthase RibB SWALL:RIBB_ECO57 (SWALL:P24199) (217 aa) fasta scores: E(): 2.6e-29%2C 43.78%25 id in 201 aa%2C and to Streptomyces coelicolor 3%2C4-dihydroxy-2-butanone 4-phosphate synthase RibA or SCO1441 or SC6D7A.04c SWALL:Q9EWJ8 (EMBL:AL450443) (429 aa) fasta scores: E(): 1.6e-32%2C 47%25 id in 200 aa gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=TW708 TW709 TW709 ribA ribA 802594 803229 + GTP cyclohydrolase II Similar to Streptomyces coelicolor GTP cyclohydrolase II RibA or SCO6655 or SC5A7.05 SWALL:GCH2_STRCO (SWALL:O88011) (221 aa) fasta scores: E(): 5.3e-34%2C 52.12%25 id in 188 aa%2C and to Arabidopsis thaliana GTP cyclohydrolase II SWALL:GCH2_ARATH (SWALL:P47924) (245 aa) fasta scores: E(): 1.3e-31%2C 47.54%25 id in 183 aa gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=TW709 TW710 TW710 ribH ribH 803253 803723 + 6%2C7-dimethyl-8-ribityllumazine synthase Similar to Aquifex aeolicus 6%2C7-dimethyl-8-ribityllumazine synthase RibH or aq_132 SWALL:RISB_AQUAE (SWALL:O66529) (154 aa) fasta scores: E(): 1.7e-11%2C 36.69%25 id in 139 aa gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=TW710 TW711 TW711 pncA pncA 803796 804407 - pyrazinamidase/nicotinamidase Similar to Mycobacterium tuberculosis pyrazinamidase/nicotinamidase PncA or Rv2043c or mtv018.30c or mt2103 SWALL:Q50575 (EMBL:U59967) (186 aa) fasta scores: E(): 1.6e-28%2C 43.85%25 id in 187 aa gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=TW711 TW712 TW712 TW712 804753 806291 - putative secreted proteinase Similar to Streptomyces lividans proteinase slpE SWALL:Q54399 (EMBL:L42759) (513 aa) fasta scores: E(): 1.6e-39%2C 34.32%25 id in 536 aa gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=TW712 TW713 TW713 TW713 806432 807667 - putative DNA polymerase Similar to Streptomyces coelicolor putative DNA polymerase SCO3541 or SCH5.03C SWALL:Q9X906 (EMBL:AL035636) (401 aa) fasta scores: E(): 1.2e-25%2C 30.36%25 id in 359 aa gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=TW713 TW714 TW714 TW714 807832 808431 - putative nucleotide kinase Similar to Bacillus halodurans thymidylate kinase tmk or bh0042 SWALL:KTHY_BACHD (SWALL:Q9KGL9) (210 aa) fasta scores: E(): 1.9e-21%2C 40.39%25 id in 203 aa gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=TW714 TW715 TW715 topA topA 808491 811016 - DNA topoisomerase I Similar to Escherichia coli DNA topoisomerase I TopA or SupX or b1274 SWALL:TOP1_ECOLI (SWALL:P06612) (865 aa) fasta scores: E(): 3e-47%2C 36.55%25 id in 766 aa%2C and to Bifidobacterium longum NCC2705 DNA topoisomerase i topA SWALL:AAN24314 (EMBL:AE014668) (1030 aa) fasta scores: E(): 2.9e-49%2C 45.38%25 id in 932 aa gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=TW715 TW716 TW716 TW716 811077 811487 - putative membrane protein No significant database matches gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=TW716 TW717 TW717 TW717 811484 811840 - putative membrane protein No significant database matches gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=TW717 TW718 TW718 TW718 811842 812048 - putative membrane protein No significant database matches gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=TW718 TW719 TW719 TW719 812076 813008 - putative integral membrane protein No significant database matches gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=TW719 TW720 TW720 TW720 812993 813937 - putative TadA-like protein Similar to Corynebacterium glutamicum predicted ATPases involved in pili and flagella biosynthesis%2C VirB11 family cgl0301 SWALL:Q8NTK6 (EMBL:AP005274) (341 aa) fasta scores: E(): 2.9e-40%2C 43.18%25 id in 301 aa%2C and to Actinobacillus actinomycetemcomitans TadA SWALL:Q9XC06 (EMBL:AF152598) (426 aa) fasta scores: E(): 7e-36%2C 37.33%25 id in 308 aa gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=TW720 TW721 TW721 TW721 814114 814572 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv3678c or Mtv025.026c or mt3779 SWALL:O69646 (EMBL:AL022121) (151 aa) fasta scores: E(): 3e-25%2C 55.47%25 id in 146 aa gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=TW721 TW722 TW722 TW722 815134 817764 + putative penicillin-binding protein/transpeptidase Similar to Bifidobacterium longum NCC2705 possible penicillin-binding protein bl1215 SWALL:AAN25022 (EMBL:AE014747) (771 aa) fasta scores: E(): 1e-29%2C 32.76%25 id in 766 aa%2C and to Mycobacterium leprae Pbp1 Pon1 SWALL:P72351 (EMBL:S82044) (821 aa) fasta scores: E(): 1.1e-08%2C 27.82%25 id in 823 aa gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=TW722 TW723 TW723 TW723 817873 818757 + putative secreted protein Similar to Mycobacterium tuberculosis hypothetical protein Rv3683 or mtv025.031 or mt3785 SWALL:O69651 (EMBL:AL022121) (319 aa) fasta scores: E(): 1.1e-45%2C 44.29%25 id in 289 aa gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=TW723 TW724 TW724 asd asd 819127 820140 - aspartate-semialdehyde dehydrogenase Similar to Mycobacterium bovis aspartate-semialdehyde dehydrogenase Asd SWALL:DHAS_MYCBO (SWALL:P47730) (345 aa) fasta scores: E(): 5.7e-62%2C 54.89%25 id in 337 aa gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=TW724 TW725 TW725 lysC lysC 820137 821393 - aspartokinase Similar to Corynebacterium glutamicum aspartokinase LysC or cgl0251 SWALL:AK_CORGL (SWALL:P26512) (421 aa) fasta scores: E(): 9.8e-73%2C 49.4%25 id in 421 aa gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=TW725 TW726 TW726 recR recR 821589 822185 - recombination protein RecR Similar to Bacillus subtilis recombination protein RecR or RecM or RecD SWALL:RECR_BACSU (SWALL:P24277) (198 aa) fasta scores: E(): 1.1e-39%2C 53.09%25 id in 194 aa%2C and to Streptomyces coelicolor recombination protein RecR or SCO3618 or SC66T3.29c SWALL:RECR_STRCO (SWALL:Q9XAI4) (199 aa) fasta scores: E(): 1.1e-52%2C 68.68%25 id in 198 aa gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=TW726 TW727 TW727 dnaX dnaX 822194 823762 - DNA polymerase III subunit gamma/tau Similar to Bacillus subtilis DNA polymerase III subunit gamma/tau DnaX or DnaH SWALL:DP3X_BACSU (SWALL:P09122) (563 aa) fasta scores: E(): 2e-40%2C 36.18%25 id in 362 aa%2C and to Bifidobacterium longum NCC2705 DNA polymerase III subunit gamma/tau DnaX SWALL:AAN24329 (EMBL:AE014670) (970 aa) fasta scores: E(): 1.3e-71%2C 57.61%25 id in 361 aa gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=TW727 TW728 TW728 rplL rplL 823996 824376 - 50s ribosomal protein L7/L12 Similar to Mycobacterium tuberculosis 50s ribosomal protein L7/L12 RplL or Rv0652 or mt0681 or mtcy20h10.33 SWALL:RL7_MYCTU (SWALL:P37381) (130 aa) fasta scores: E(): 7.9e-23%2C 68.46%25 id in 130 aa gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=TW728 TW729 TW729 rplJ rplJ 824388 824888 - 50s ribosomal protein L10 Similar to Streptomyces antibioticus 50s ribosomal protein L10 RplJ SWALL:RL10_STRAT (SWALL:P29343) (176 aa) fasta scores: E(): 9.3e-17%2C 40.99%25 id in 161 aa gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=TW729 TW730 TW730 rplA rplA 825023 825706 - 50S ribosomal protein L1 Similar to Streptomyces sp. 50s ribosomal protein L1 RplA SWALL:RL1_STRSQ (SWALL:Q07976) (242 aa) fasta scores: E(): 9.3e-43%2C 57.14%25 id in 224 aa gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=TW730 TW731 TW731 rplK rplK 825703 826128 - 50S ribosomal protein L11 Similar to Streptomyces lavendulae 50s ribosomal protein L11 RplK or RelC SWALL:RL11_STRLA (SWALL:O87733) (144 aa) fasta scores: E(): 6.8e-36%2C 76.64%25 id in 137 aa gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=TW731 TW732 TW732 nusG nusG 826165 826782 - transcription antitermination protein NusG Similar to Streptomyces griseus transcription antitermination protein NusG SWALL:NUSG_STRGR (SWALL:P36260) (294 aa) fasta scores: E(): 3e-35%2C 48.27%25 id in 203 aa gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=TW732 TW733 TW733 aspC aspC 827185 828399 + aspartate aminotransferase Similar to Bacillus stearothermophilus aspartate aminotransferase aspC SWALL:AAT_BACST (SWALL:Q59228) (393 aa) fasta scores: E(): 7.5e-50%2C 38.71%25 id in 372 aa gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=TW733 TW734 TW734 murB murB 828402 829457 - UDP-N-acetylenolpyruvoylglucosamine reductase Similar to Escherichia coli UDP-N-acetylenolpyruvoylglucosamine reductase MurB or b3972 SWALL:MURB_ECOLI (SWALL:P08373) (342 aa) fasta scores: E(): 1.4e-08%2C 31.05%25 id in 351 aa%2C and to Mycobacterium tuberculosis UDP-N-acetylenolpyruvoylglucosamine reductase MurB or Rv0482 or mt0500 or mtcy20g9.08 SWALL:MURB_MYCTU (SWALL:Q11148) (369 aa) fasta scores: E(): 6.7e-32%2C 38.04%25 id in 368 aa gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=TW734 TW735 TW735 TW735 829742 830185 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO4637 or SCD82.08 SWALL:Q9L0M3 (EMBL:AL160431) (142 aa) fasta scores: E(): 6e-11%2C 38.4%25 id in 138 aa gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=TW735 TW736 TW736 TW736 830331 830753 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein sco4636 sco4636 or scd82.07 SWALL:Q9L0M4 (EMBL:AL160431) (150 aa) fasta scores: E(): 8.7e-08%2C 42.22%25 id in 90 aa gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=TW736 TW737 TW737 purF purF 831128 832588 - amidophosphoribosyltransferase Similar to Escherichia coli amidophosphoribosyltransferase PurF or b2312 SWALL:PUR1_ECOLI (SWALL:P00496) (504 aa) fasta scores: E(): 2.1e-101%2C 54.73%25 id in 486 aa gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=TW737 TW738 TW738 purM purM 832699 833712 - phosphoribosylformylglycinamidine cyclo-ligase Similar to Bacillus subtilis phosphoribosylformylglycinamidine cyclo-ligase PurM or Ath SWALL:PUR5_BACSU (SWALL:P12043) (346 aa) fasta scores: E(): 5e-47%2C 43.96%25 id in 348 aa gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=TW738 TW739 TW739 purD purD 834385 835644 + phosphoribosylamine--glycine ligase Similar to Bacillus subtilis phosphoribosylamine--glycine ligase purD SWALL:PUR2_BACSU (SWALL:P12039) (422 aa) fasta scores: E(): 4.5e-44%2C 41.19%25 id in 420 aa gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=TW739 TW740 TW740 serS serS 835755 837008 + seryl-tRNA synthetase Similar to Staphylococcus aureus seryl-tRNA synthetase SerS SWALL:SYS_STAAU (SWALL:P95689) (428 aa) fasta scores: E(): 1.2e-51%2C 36.19%25 id in 420 aa%2C and to Corynebacterium glutamicum seryl-tRNA synthetase cgl2893 SWALL:Q8NLP6 (EMBL:AP005283) (422 aa) fasta scores: E(): 3.8e-88%2C 53.47%25 id in 417 aa gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=TW740 TW741 TW741 TW741 837031 837822 + conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO4581 or SCD16A.02c SWALL:Q9XAS3 (EMBL:AL078618) (269 aa) fasta scores: E(): 6.9e-07%2C 27.2%25 id in 272 aa gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=TW741 TW742 TW742 TW742 838028 839191 + conserved hypothetical protein Similar to Streptomyces coelicolor putative transcriptional regulator SCO6020 or SC1C3.08c SWALL:O69850 (EMBL:AL023702) (366 aa) fasta scores: E(): 1.1e-30%2C 34.68%25 id in 346 aa gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=TW742 TW743 TW743 hemL hemL 839366 840766 - glutamate-1-semialdehyde 2%2C1-aminomutase Similar to Escherichia coli glutamate-1-semialdehyde 2%2C1-aminomutase HemL or Gsa or PopC or b0154 SWALL:GSA_ECOLI (SWALL:P23893) (426 aa) fasta scores: E(): 2.3e-45%2C 45.47%25 id in 453 aa gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=TW743 TW744 TW744 hemB hemB 840770 841741 - delta-aminolevulinic acid dehydratase Similar to Propionibacterium freudenreichii shermanii delta-aminolevulinic acid dehydratase HemB SWALL:HEM2_PROFR (SWALL:P77923) (332 aa) fasta scores: E(): 2.6e-58%2C 51.41%25 id in 319 aa gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=TW744 TW745 TW745 TW745 841752 842477 - porphyrin biosynthesis protein Similar to Clostridium josui porphyrin biosynthesis protein HemD [includes: uroporphyrin-iii c-methyltransferase (EC 2.1.1.107) (urogen iii methylase)(sumt)(uroporphyrinogen iii methylase) (urom)%3B uroporphyrinogen-iii synthase (EC 4.2.1.75) (uros) (uroporphyrinogen-iii cosynthetase) (hydroxymethylbilane hydrolyase [cyclizing])] SWALL:HEM4_CLOJO (SWALL:Q59294) (504 aa) fasta scores: E(): 0.57%2C 23.22%25 id in 254 aa%2C and to Deinococcus radiodurans uroporphyrinogen-III synthase%2C putative dr0786 SWALL:Q9RW83 (EMBL:AE001933) (257 aa) fasta scores: E(): 1.8e-06%2C 29.08%25 id in 251 aa gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=TW745 TW746 TW746 hemC hemC 842474 843439 - porphobilinogen deaminase Similar to Escherichia coli porphobilinogen deaminase HemC or PopE or b3805 SWALL:HEM3_ECOLI (SWALL:P06983) (313 aa) fasta scores: E(): 1.1e-20%2C 34.84%25 id in 330 aa gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=TW746 TW747 TW747 hemH hemH 843450 844625 - ferrochelatase Similar to Propionibacterium freudenreichii shermanii ferrochelatase HemH SWALL:HEMZ_PROFR (SWALL:P72183) (352 aa) fasta scores: E(): 8.7e-19%2C 38.69%25 id in 367 aa gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=TW747 TW748 TW748 TW748 844622 845269 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO6042 or SC1B5.02 SWALL:O69830 (EMBL:AL023517) (243 aa) fasta scores: E(): 5.8e-36%2C 49.45%25 id in 184 aa gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=TW748 TW749 TW749 hemE hemE 845400 846557 - uroporphyrinogen decarboxylase Similar to Mycobacterium tuberculosis uroporphyrinogen decarboxylase HemE or Rv2678c or mt2752 or mtv010.02C SWALL:DCUP_MYCTU (SWALL:O53231) (357 aa) fasta scores: E(): 5.9e-45%2C 42.81%25 id in 362 aa%2C and to Mus musculus uroporphyrinogen decarboxylase UroD SWALL:Q91VW4 (EMBL:BC008109) (367 aa) fasta scores: E(): 2.9e-36%2C 35.59%25 id in 354 aa gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=TW749 TW750 TW750 hemA hemA 846577 847920 + glutamyl-tRNA reductase Similar to Escherichia coli glutamyl-tRNA reductase HemA or b1210 or z1981 or ecs1715 SWALL:HEM1_ECOLI (SWALL:P13580) (418 aa) fasta scores: E(): 3.1e-12%2C 25.5%25 id in 447 aa%2C and to Mycobacterium tuberculosis glutamyl-tRNA reductase HemA or Rv0509 or mt0530 or mtcy20g9.36 SWALL:HEM1_MYCTU (SWALL:Q11139) (468 aa) fasta scores: E(): 2.5e-19%2C 28.09%25 id in 452 aa gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=TW750 TW751 TW751 TW751 847917 849119 + conserved hypothetical protein Similar to Corynebacterium glutamicum O-succinylbenzoate synthase and related enzymes cgl0466 SWALL:Q8NT44 (EMBL:AP005275) (338 aa) fasta scores: E(): 1e-06%2C 29.63%25 id in 405 aa%2C and to Acinetobacter calcoaceticus muconate cycloisomerase I CatB SWALL:CATB_ACICA (SWALL:Q43931) (370 aa) fasta scores: E(): 0.5%2C 21.71%25 id in 198 aa gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=TW751 TW752 TW752 dnaB dnaB 849132 850457 + replicative DNA helicase Similar to Escherichia coli replicative DNA helicase DnaB or GroP or GrpA or b4052 SWALL:DNAB_ECOLI (SWALL:P03005) (471 aa) fasta scores: E(): 4.2e-57%2C 38.39%25 id in 448 aa%2C and to Streptomyces coelicolor putative replicative DNA helicase DnaB or SCO3911 or SCH24.33 SWALL:Q9X8U7 (EMBL:AL049826) (491 aa) fasta scores: E(): 9.8e-88%2C 53.34%25 id in 433 aa gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=TW752 TW753 TW753 TW753 850732 851337 + putative membrane protein Similar to Oceanobacillus iheyensis hypothetical conserved protein ob2412 SWALL:BAC14368 (EMBL:AP004601) (194 aa) fasta scores: E(): 0.00011%2C 23.56%25 id in 191 aa gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=TW753 TW754 TW754 nagD nagD 851640 852425 + putative N-acetylglucosamine-6-phosphate deacetylase NagD Similar to Escherichia coli NagD protein NagD or b0675 or z0822 or ecs0705 SWALL:NAGD_ECOLI (SWALL:P15302) (250 aa) fasta scores: E(): 1.8e-34%2C 41.46%25 id in 246 aa%2C and to Streptomyces coelicolor hypothetical protein SCO2843 or SCE20.17c SWALL:Q9RDA8 (EMBL:AL136058) (259 aa) fasta scores: E(): 9.8e-58%2C 57.81%25 id in 256 aa gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=TW754 TW755 TW755 pyrE pyrE 852422 853066 - orotate phosphoribosyltransferase Similar to Pyrococcus abyssi orotate phosphoribosyltransferase PyrE or Pab2430 SWALL:PYRE_PYRAB (SWALL:P56814) (182 aa) fasta scores: E(): 8e-18%2C 39.44%25 id in 180 aa%2C and to Streptomyces coelicolor orotate phosphoribosyltransferase PyrE or SCO3650 or SCH10.28c SWALL:PYRE_STRCO (SWALL:Q9X8R7) (182 aa) fasta scores: E(): 3.1e-32%2C 55.55%25 id in 171 aa. Note possible alternative downstream start sites. gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=TW755 TW756 TW756 xthA1 xthA1 853087 853896 + exodeoxyribonuclease III Similar to Escherichia coli exodeoxyribonuclease III XthA or Xth or b1749 SWALL:EX3_ECOLI (SWALL:P09030) (268 aa) fasta scores: E(): 6.5e-17%2C 29.93%25 id in 284 aa%2C and to Caulobacter crescentus exodeoxyribonuclease III cc2011 SWALL:Q9A6S2 (EMBL:AE005874) (262 aa) fasta scores: E(): 4.8e-33%2C 39.41%25 id in 274 aa gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=TW756 TW757 TW757 TW757 853877 854614 - putative integral membrane protein No significant database matches. Note overlap with downstteam CDS. gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=TW757 TW758 TW758 clpB clpB 854662 856761 - heat shock protein ClpB Similar to Streptomyces albus G heat shock protein ClpB SWALL:Q9Z6E4 (EMBL:AF076980) (857 aa) fasta scores: E(): 2.9e-134%2C 59.62%25 id in 686 aa. Note approx 150 residue N-termunal truncation relative to all homologues. gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=TW758 TW759 TW759 hspR hspR 856754 857146 - heat shock regulator protein HspR Similar to Streptomyces coelicolor putative heat shock protein HspR or SCO3668 or SCH44.08c SWALL:HSPR_STRCO (SWALL:P40183) (151 aa) fasta scores: E(): 2.6e-11%2C 40.15%25 id in 132 aa%2C and to Streptomyces albus G HspR SWALL:P96458 (EMBL:U43299) (154 aa) fasta scores: E(): 5.6e-10%2C 39.41%25 id in 137 aa gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=TW759 TW760 TW760 dnaJ2 dnaJ2 857155 858018 - molecular chaperone DnaJ Similar to Streptomyces coelicolor chaperone protein DnaJ or SCO3669 or SCH44.09c SWALL:DNAJ_STRCO (SWALL:P40170) (399 aa) fasta scores: E(): 3.5e-17%2C 30.82%25 id in 399 aa%2C and to Escherichia coli curved DNA-binding protein CbpA or b1000 SWALL:CBPA_ECOLI (SWALL:P36659) (306 aa) fasta scores: E(): 1.5e-20%2C 40.19%25 id in 301 aa%2C and to Escherichia coli chaperone protein DnaJ or GroP or b0015 SWALL:DNAJ_ECOLI (SWALL:P08622) (375 aa) fasta scores: E(): 5.1e-13%2C 31.32%25 id in 348 aa gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=TW760 TW761 TW761 grpE grpE 858011 858580 - heat shock protein GrpE Similar to Streptomyces coelicolor GrpE protein or SCO3670 or SCH44.10c SWALL:GRPE_STRCO (SWALL:Q05562) (225 aa) fasta scores: E(): 1.3e-12%2C 33.16%25 id in 196 aa%2C and to Bacillus thermoglucosidasius GrpE protein SWALL:Q9KWS8 (EMBL:AB017035) (224 aa) fasta scores: E(): 2.8e-08%2C 30.81%25 id in 185 aa%2C and to Leptospira interrogans GrpE protein SWALL:GRPE_LEPIN (SWALL:O51868) (212 aa) fasta scores: E(): 1.6e-07%2C 28.85%25 id in 201 aa gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=TW761 TW762 TW762 dnaK dnaK 858605 860416 - chaperone protein DnaK Similar to Mycobacterium paratuberculosis chaperone protein DnaK SWALL:DNAK_MYCPA (SWALL:Q00488) (622 aa) fasta scores: E(): 2e-134%2C 66.72%25 id in 625 aa gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=TW762 TW763 TW763 TW763 860629 861141 + conserved hypothetical protein (putative deaminase) Similar to many of undefined function eg. Streptomyces coelicolor putative deaminase SCO4038 or 2SCD60.04c SWALL:Q9AK79 (EMBL:AL583944) (143 aa) fasta scores: E(): 4.2e-25%2C 52.11%25 id in 142 aa%2C and to Mycobacterium tuberculosis hypothetical 15.9 kDa protein Rv3752c or mtv025.100c or mt3859 SWALL:O69719 (EMBL:AL022121) (152 aa) fasta scores: E(): 1.3e-24%2C 52%25 id in 150 aa gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=TW763 TW764 TW764 proC proC 861255 862145 + pyrroline-5-carboxylate reductase Similar to Escherichia coli pyrroline-5-carboxylate reductase ProC or b0386 SWALL:PROC_ECOLI (SWALL:P00373) (269 aa) fasta scores: E(): 5.8e-11%2C 25.45%25 id in 275 aa gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=TW764 TW765 TW765 TW765 862538 862864 + hypothetical protein No significant database matches gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=TW765 TW766 TW766 aspS aspS 862885 864183 - aspartyl-tRNA synthetase Similar to Pyrococcus kodakaraensis aspartyl-tRNA synthetase AspS SWALL:SYD_PYRKO (SWALL:Q52428) (438 aa) fasta scores: E(): 1.8e-60%2C 39.63%25 id in 434 aa gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=TW766 TW767 TW767 TW767 864255 864863 + putative phosphoglycerate mutase Similar to Streptomyces coelicolor putative phosphoglycerate mutase SCO4470 or SCD65.13 SWALL:Q9F2R9 (EMBL:AL392176) (233 aa) fasta scores: E(): 9.5e-34%2C 45.12%25 id in 195 aa gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=TW767 TW768 TW768 TW768 864901 865533 + putative lipoprotein No significant database matches gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=TW768 TW769 TW769 ccdA ccdA 865758 866444 + cytochrome c-type biogenesis protein CcdA Similar to Bacillus subtilis cytochrome c-type biogenesis protein CcdA SWALL:CCDA_BACSU (SWALL:P45706) (235 aa) fasta scores: E(): 1.7e-09%2C 26.4%25 id in 231 aa%2C and to Rhodobacter capsulatus c-type cytochrome biogenesis protein CcdA SWALL:Q9LA04 (EMBL:AF156103) (252 aa) fasta scores: E(): 2.7e-12%2C 32.8%25 id in 253 aa gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=TW769 TW770 TW770 TW770 866473 868056 + putative integral membrane protein Similar to Streptomyces coelicolor putative integral membrane protein SCO4474 or SCD65.17 SWALL:Q9F2R5 (EMBL:AL392176) (574 aa) fasta scores: E(): 1.8e-16%2C 37.09%25 id in 523 aa gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=TW770 TW771 TW771 TW771 868063 869034 + putative cytochrome biogenesis protein Similar to Aquifex aeolicus cytochrome c biogenesis protein HemX2 or aq_2043 SWALL:O67831 (EMBL:AE000769) (312 aa) fasta scores: E(): 3.7e-27%2C 33.58%25 id in 262 aa%2C and to Chlamydomonas reinhardtii cytochrome c biogenesis protein CcsA SWALL:CCSA_CHLRE (SWALL:P48269) (353 aa) fasta scores: E(): 4.9e-22%2C 29.43%25 id in 299 aa gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=TW771 TW772 TW772 TW772 869029 871320 - WiSP family protein No significant database matches. Rep6. gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=TW772 TW773 TW773 TW773 871415 871729 - putative membrane protein No significant database matches gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=TW773 TW774 TW774 TW774 871798 872406 - WiSP family protein No significant database matches gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=TW774 TW775 TW775 metG metG 872789 874540 + methionyl-tRNA synthetase Similar to Bacillus stearothermophilus methionyl-tRNA synthetase MetG or MetS SWALL:SYM_BACST (SWALL:P23920) (649 aa) fasta scores: E(): 1e-30%2C 36.62%25 id in 598 aa gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=TW775 TW776 TW776 TW776 875052 881462 - WiSP family protein No significant database matches gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=TW776 TW777 TW777 TW777 881548 882351 - putative glycosyl transferase Similar to Streptomyces coelicolor putative glycosyl transferase SCO1423 or SC6D7.16 SWALL:Q9RKY2 (EMBL:AL133213) (302 aa) fasta scores: E(): 6.1e-44%2C 49.15%25 id in 236 aa%2C and to Mus musculus dolichol-phosphate mannosyltransferase Dpm1 SWALL:DPM1_MOUSE (SWALL:O70152) (260 aa) fasta scores: E(): 3.7e-24%2C 37.6%25 id in 234 aa gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=TW777 TW778 TW778 TW778 882521 882823 + hypothetical protein Doubtful CDS. No significant database matches. Note possible doubtful CDS on opposite strand. gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=TW778 TW779 TW779 TW779 882892 883335 - putative membrane protein Weakly similar to Mycobacterium leprae putative membrane protein Ml2296 SWALL:Q9CB97 (EMBL:AL583925) (181 aa) fasta scores: E(): 0.039%2C 32.06%25 id in 131 aa gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=TW779 TW780 TW780 TW780 883348 883710 - putative secreted protein N-terminus similar to that of Streptomyces coelicolor putative secreted protein SCO2461 or SCC24.32 SWALL:Q9L085 (EMBL:AL163003) (108 aa) fasta scores: E(): 0.73%2C 39.13%25 id in 46 aa gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=TW780 TW781 TW781 TW781 883834 885900 - putative peptidase Similar to many predicted peptidases eg. Mycobacterium tuberculosis zinc metalloprotease Rv0198c or mtv033.06c or mt0208 SWALL:O53649 (EMBL:AL021928) (663 aa) fasta scores: E(): 8e-92%2C 44.16%25 id in 668 aa gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=TW781 TW782 TW782 TW782 885973 886731 + putative hydrolase Similar to Alcaligenes eutrophus phosphoglycolate phosphatase%2C chromosomal CbbZC SWALL:GPHC_ALCEU (SWALL:P40852) (231 aa) fasta scores: E(): 1.1e-12%2C 33.33%25 id in 228 aa gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=TW782 TW783 TW783 TW783 887009 887890 + putative DNA methylase Similar to Rhodobacter sphaeroides modification methylase RsrI RsrIM SWALL:MTR1_RHOSH (SWALL:P14751) (319 aa) fasta scores: E(): 3.3e-14%2C 32.82%25 id in 262 aa gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=TW783 TW784 TW784 TW784 888171 888836 + conserved hypothetical protein Similar to Bifidobacterium longum NCC2705 hypothetical protein with Fha domain bl0583 SWALL:AAN24407 (EMBL:AE014680) (233 aa) fasta scores: E(): 8.6e-05%2C 29.51%25 id in 227 aa gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=TW784 TW785 TW785 TW785 889052 889501 + putative secreted protein Similar to Corynebacterium glutamicum FHA-domain-containing proteins cgl0046 SWALL:Q8NU93 (EMBL:AP005274) (154 aa) fasta scores: E(): 3.9e-10%2C 29.67%25 id in 155 aa gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=TW785 TW786 TW786 TW786 889664 891010 + putative FtsW/RodA/SpoVE family cell cycle protein Similar to Streptomyces coelicolor putative FtsW/RodA/SpoVE family cell cycle protein SCO3846 or SCH69.16 SWALL:Q9XA18 (EMBL:AL079308) (479 aa) fasta scores: E(): 6.7e-49%2C 38.46%25 id in 442 aa%2C and to Bacillus subtilis stage V sporulation protein E SpoVE SWALL:SP5E_BACSU (SWALL:P07373) (366 aa) fasta scores: E(): 6.2e-21%2C 30.13%25 id in 365 aa gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=TW786 TW787 TW787 TW787 891053 892510 + putative penicillin-binding protein Similar to Streptomyces griseus PbpA SWALL:Q9L656 (EMBL:AF241575) (485 aa) fasta scores: E(): 1.3e-40%2C 33.47%25 id in 487 aa gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=TW787 TW788 TW788 TW788 892514 894271 + putative serine/threonine-protein kinase Similar to many predicted serine/threonine-protein kinases eg. Mycobacterium tuberculosis probable serine/threonine-protein kinase PknA or Rv0015c or mt0018 or mtcy10h4.15C SWALL:PKNA_MYCTU (SWALL:P71585) (431 aa) fasta scores: E(): 1.1e-39%2C 44.9%25 id in 363 aa gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=TW788 TW789 TW789 TW789 894276 895928 + putative serine/threonine-protein kinase Similar to many predicted serine/threonine-protein kinases eg. Mycobacterium leprae probable serine/threonine-protein kinase pknb pknb or ml0016 SWALL:PKNB_MYCLE (SWALL:P54744) (622 aa) fasta scores: E(): 7.7e-08%2C 25.27%25 id in 459 aa gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=TW789 TW790 TW790 TW790 896339 897667 - putative NADH dehydrogenase Similar to Streptomyces coelicolor putative dehydrogenase SCO7101 or SC4B10.02 SWALL:Q9FC85 (EMBL:AL391515) (451 aa) fasta scores: E(): 2.8e-78%2C 48.95%25 id in 429 aa%2C and to Escherichia coli NADH dehydrogenase Ndh or b1109 SWALL:DHNA_ECOLI (SWALL:P00393) (433 aa) fasta scores: E(): 5.9e-20%2C 31.05%25 id in 409 aa gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=TW790 TW791 TW791 TW791 897747 898235 - conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein Rv1025 or mt1053 or mtcy10g2.24C SWALL:P96375 (EMBL:Z92539) (163 aa) fasta scores: E(): 1.3e-26%2C 54.11%25 id in 146 aa gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=TW791 TW792 TW792 TW792 898237 898647 - putative secreted protein No significant database matches gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=TW792 TW793 TW793 eno eno 898644 899930 - enolase Similar to Bacillus subtilis Enolase Eno SWALL:ENO_BACSU (SWALL:P37869) (430 aa) fasta scores: E(): 2e-101%2C 62.11%25 id in 425 aa gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=TW793 TW794 TW794 hisS hisS 900245 901525 - histidyl-tRNA synthetase Similar to Xanthomonas axonopodis histidyl-tRNA synthetase HisS or xac1826 SWALL:Q8PLH2 (EMBL:AE011816) (478 aa) fasta scores: E(): 6e-24%2C 28.8%25 id in 427 aa%2C and to Oryza sativa histidyl-trna synthetase SWALL:SYH_ORYSA (SWALL:P93422) (494 aa) fasta scores: E(): 4.9e-19%2C 28.29%25 id in 410 aa gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=TW794 TW795 TW795 TW795 901522 902679 - putative sodium/proton antiporter Similar to Escherichia coli sodium/proton antiporter 1 NhaA or Ant or b0019 SWALL:NHAA_ECOLI (SWALL:P13738) (388 aa) fasta scores: E(): 7.6e-35%2C 35.26%25 id in 380 aa%2C and to Streptomyces coelicolor putative sodium/proton antiporter SCO3564 or SCH5.27 SWALL:Q9X929 (EMBL:AL035636) (474 aa) fasta scores: E(): 3.7e-36%2C 38.24%25 id in 387 aa gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=TW795 TW796 TW796 dcd dcd 902676 903266 - deoxycytidine triphosphate deaminase Similar to Escherichia coli deoxycytidine triphosphate deaminase Dcd or Dus or PaxA or b2065 SWALL:DCD_ECOLI (SWALL:P28248) (193 aa) fasta scores: E(): 1.2e-19%2C 44.97%25 id in 189 aa gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=TW796 TW797 TW797 pdhC pdhC 903614 904936 - dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex Similar to Bacillus subtilis dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex PdhC or AceC SWALL:ODP2_BACSU (SWALL:P21883) (441 aa) fasta scores: E(): 1.5e-29%2C 29.53%25 id in 447 aa%2C and to Streptomyces coelicolor putative dihydrolipoamide acyltransferase component bkdc1 or sco3815 or scgd3.16C SWALL:Q9XA62 (EMBL:AL096822) (469 aa) fasta scores: E(): 1e-39%2C 42.07%25 id in 473 aa gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=TW797 TW798 TW798 pdhB pdhB 904954 905958 - pyruvate dehydrogenase E1 component%2C beta subunit Similar to Bacillus subtilis pyruvate dehydrogenase E1 component%2C beta subunit PdhB or AceB SWALL:ODPB_BACSU (SWALL:P21882) (324 aa) fasta scores: E(): 1.1e-43%2C 41.3%25 id in 322 aa%2C and to Streptomyces coelicolor putative branched-chain alpha keto acid dehydrogenase E1 beta subunit BkdB1 or SCO3816 or SCGD3.17C SWALL:Q9XA61 (EMBL:AL096822) (326 aa) fasta scores: E(): 3.1e-68%2C 57.72%25 id in 317 aa gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=TW798 TW799 TW799 pdhA pdhA 905955 907067 - pyruvate dehydrogenase E1 component%2C alpha subunit Similar to Bacillus subtilis 2-oxoisovalerate dehydrogenase alpha subunit BfmBaa or BfmB1A SWALL:ODBA_BACSU (SWALL:P37940) (330 aa) fasta scores: E(): 4e-30%2C 34.13%25 id in 334 aa%2C and to Streptomyces coelicolor putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit BkdA1 or SCO3817 or SCGD3.18C SWALL:Q9XA60 (EMBL:AL096822) (417 aa) fasta scores: E(): 4.3e-35%2C 44.62%25 id in 363 aa gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=TW799 TW800 TW800 purB purB 907280 908725 + adenylosuccinate lyase Similar to Escherichia coli adenylosuccinate lyase PurB or b1131 SWALL:PUR8_ECOLI (SWALL:P25739) (456 aa) fasta scores: E(): 8.2e-73%2C 43.01%25 id in 451 aa gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=TW800 TW801 TW801 purA purA 908787 910076 + adenylosuccinate synthetase Similar to Escherichia coli adenylosuccinate synthetase PurA or AdeK or b4177 or z5784 or ecs5153 SWALL:PURA_ECOLI (SWALL:P12283) (431 aa) fasta scores: E(): 1.3e-76%2C 46.6%25 id in 427 aa gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=TW801 TW802 TW802 TW802 910180 910497 + putative chorismate mutase Similar to Rhizobium meliloti putative chorismate mutase protein PheAa or r03241 or smc03858 SWALL:Q92L44 (EMBL:AL591793) (111 aa) fasta scores: E(): 3.2e-05%2C 33.7%25 id in 89 aa%2C and to N-terminal portion of Escherichia coli P-protein [includes: chorismate mutase (EC 5.4.99.5) (cm)%3B prephenate dehydratase (EC 4.2.1.51) (pdt)] PheA or b2599 or z3891 or ecs3462 SWALL:PHEA_ECOLI (SWALL:P07022) (386 aa) fasta scores: E(): 0.18%2C 31.76%25 id in 85 aa gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=TW802 TW803 TW803 purL purL 910537 912819 - phosphoribosylformylglycinamidine synthase II Similar to Mycobacterium tuberculosis phosphoribosylformylglycinamidine synthase II PurL or Rv0803 or mt0823 or mtcy07h7a.06C SWALL:PURL_MYCTU (SWALL:P54876) (754 aa) fasta scores: E(): 2.8e-149%2C 54.12%25 id in 739 aa gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=TW803 TW804 TW804 TW804 912816 913088 - hypothetical protein Doubtful CDS. No significant database matches gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=TW804 TW805 TW805 purQ purQ 913300 913980 - phosphoribosylformylglycinamidine synthase I Similar to Lactococcus lactis phosphoribosylformylglycinamidine synthase I PurQ SWALL:PURQ_LACLC (SWALL:Q9ZB07) (226 aa) fasta scores: E(): 3.5e-32%2C 44.49%25 id in 218 aa gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=TW805 TW806 TW806 TW806 913984 914232 - conserved hypothetical protein Similar to many CDSs found directly upstream of purQ eg. Streptomyces coelicolor hypothetical protein SCO4077 or SCD25.13 SWALL:Q9RKK7 (EMBL:AL118514) (90 aa) fasta scores: E(): 1.5e-08%2C 46.34%25 id in 82 aa gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=TW806 TW807 TW807 TW807 914410 915627 + putative glycosyltransferase Similar to many predicted glycosyltransferases eg. Corynebacterium glutamicum predicted glycosyltransferases cgl0401 SWALL:Q8NTA6 (EMBL:AP005275) (418 aa) fasta scores: E(): 2.3e-39%2C 33.97%25 id in 415 aa gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=TW807 TW808 TW808 TW808 915642 916367 - conserved hypothetical protein N-terminal region similar to many eg. Mycobacterium leprae hypothetical protein Ml1495 SWALL:Q9CBX4 (EMBL:AL583922) (308 aa) fasta scores: E(): 1.9e-13%2C 33.19%25 id in 241 aa gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=TW808 TW809 TW809 TW809 916433 917989 + conserved integral membrane protein (possible virulence factor) Similar to Bifidobacterium longum NCC2705 conserved hypothetical membrane protein MviN family bl0651 SWALL:AAN24473 (EMBL:AE014686) (575 aa) fasta scores: E(): 5.4e-29%2C 32.78%25 id in 482 aa%2C and to Vibrio cholerae virulence factor MviN homolog or vc0680 SWALL:MVIN_VIBCH (SWALL:O34238) (525 aa) fasta scores: E(): 7.9e-16%2C 22.96%25 id in 527 aa gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=TW809 TW810 TW810 TW810 918020 919456 + putative RNA nucleotidyltransferase Similar to Streptomyces coelicolor putative RNA nucleotidyltransferase SCO3896 or SCH24.18 SWALL:Q9X8T2 (EMBL:AL049826) (483 aa) fasta scores: E(): 2.3e-97%2C 55.35%25 id in 448 aa%2C and to Bacillus subtilis poly(a) polymerase PapS SWALL:PAPS_BACSU (SWALL:P42977) (397 aa) fasta scores: E(): 5.5e-20%2C 39.9%25 id in 208 aa gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=TW810 TW811 TW811 parB parB 919509 920384 - putative chromosome partitioning protein ParB Similar to Streptomyces coelicolor ParB SWALL:Q9RFM2 (EMBL:AF187159) (368 aa) fasta scores: E(): 9.2e-40%2C 46.38%25 id in 263 aa gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=TW811 TW812 TW812 parA1 parA1 920395 921297 - putative chromosome partitioning protein ParA Similar to Streptomyces coelicolor ParA SWALL:Q9RFM1 (EMBL:AF187159) (357 aa) fasta scores: E(): 2.1e-44%2C 49.49%25 id in 295 aa gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=TW812 TW813 TW813 TW813 921486 923636 - putative metal cation-transporting ATPase Similar to Streptomyces coelicolor probable cation-transporting P-type ATPase SCO2731 or SCC57A.02 SWALL:Q9RDJ4 (EMBL:AL136519) (760 aa) fasta scores: E(): 2.1e-76%2C 42.31%25 id in 761 aa%2C and to Enterococcus hirae probable copper importing ATPase A CopA SWALL:COPA_ENTHR (SWALL:P32113) (727 aa) fasta scores: E(): 1e-65%2C 36.03%25 id in 741 aa gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=TW813 TW814 TW814 TW814 923696 924196 - conserved hypothetical protein Similar to Streptomyces coelicolor JAG-like protein Jag or SCO3884 or SCH24.06 SWALL:O54595 (EMBL:Y16311) (170 aa) fasta scores: E(): 6.7e-10%2C 31.13%25 id in 167 aa gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=TW814 TW815 TW815 TW815 924201 925133 - conserved integral membrane protein Similar to Streptomyces coelicolor inner membrane protein SCO3883 or SCH24.05 SWALL:O54569 (EMBL:Y16311) (431 aa) fasta scores: E(): 1.2e-33%2C 42.25%25 id in 284 aa gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=TW815 TW816 TW816 TW816 925126 925404 - conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein SCO3882 or SCH24.04 SWALL:Y2I2_STRCO (SWALL:O54625) (124 aa) fasta scores: E(): 1.8e-10%2C 52.23%25 id in 67 aa%2C and to Chlamydia pneumoniae hypothetical protein Cpn0592/Cp0156/Cpj0592 SWALL:Y592_CHLPN (SWALL:Q9Z7W2) (103 aa) fasta scores: E(): 1.3e-09%2C 34.61%25 id in 78 aa gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=TW816 TW817 TW817 rnpA rnpA 925397 925735 - ribonuclease P protein component Similar to Bacillus subtilis ribonuclease P protein component RnpA SWALL:RNPA_BACSU (SWALL:P25814) (116 aa) fasta scores: E(): 0.00084%2C 29.8%25 id in 104 aa gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=TW817