locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Trad_0001 Trad_0001 Trad_0001 166 1500 + chromosomal replication initiator protein DnaA COGs: COG0593 ATPase involved in DNA replication initiation~InterProIPR001957:IPR013317:IPR013159:IPR020591:IPR 010921:IPR003593:IPR018312~KEGG: tth:TTC1608 chromosomal replication initiation protein~PFAM: Chromosomal replication initiator DnaA%3B Chromosomal replication initiator DnaA domain~SMART: Chromosomal replication initiator DnaA domain%3B AAA ATPase~SPTR: B7ABI9 Chromosomal replication initiator protein dnaA~TIGRFAM: chromosomal replication initiator protein DnaA~PFAM: domain%3B Bacterial dnaA protein~TIGRFAM: chromosomal replication initiator protein DnaA gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0001 Trad_0002 Trad_0002 Trad_0002 1830 2921 + DNA polymerase III%2C beta subunit COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)~InterPro IPR001001~KEGG: ddr:Deide_00020 putative DNA-directed DNA polymerase (DNA polymerase III%2C beta subunit)~PFAM: DNA polymerase III beta chain~PRIAM: DNA-directed DNA polymerase~SMART: DNA polymerase III beta chain~SPTR: C1CXJ2 Putative DNA-directed DNA polymerase (DNA polymerase III%2C beta subunit)~TIGRFAM: DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta subunit%2C C-terminal domain%3B DNA polymerase III beta subunit%2C N-terminal domain%3B DNA polymerase III beta subunit%2C central domain~TIGRFAM: DNA polymerase III%2C beta subunit gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0002 Trad_0003 Trad_0003 Trad_0003 3121 4389 + enolase COGs: COG0148 Enolase~InterPro IPR000941:IPR020811:IPR020810:IPR020809~KEGG: dge:Dgeo_0004 phosphopyruvate hydratase~PFAM: Enolase-like~PRIAM: Phosphopyruvate hydratase~SPTR: Q1J2H6 Enolase~TIGRFAM: enolase~PFAM: Enolase%2C N-terminal domain%3B Enolase%2C C-terminal TIM barrel domain~TIGRFAM: phosphopyruvate hydratase gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0003 Trad_0004 Trad_0004 Trad_0004 4389 5840 + pyruvate kinase COGs: COG0469 Pyruvate kinase~InterProIPR001697:IPR015793:IPR015794:IPR015813:IPR 015795:IPR011037:IPR018209~KEGG: ddr:Deide_00040 putative pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta~PRIAM: Pyruvate kinase~SPTR: C1CXJ4 Pyruvate kinase~TIGRFAM: pyruvate kinase~PFAM: Pyruvate kinase%2C barrel domain%3B Pyruvate kinase%2C alpha/beta domain~TIGRFAM: pyruvate kinase gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0004 Trad_0005 Trad_0005 Trad_0005 5962 6411 - ribosomal protein L9 COGs: COG0359 Ribosomal protein L9~InterPro IPR020594:IPR020070:IPR020069:IPR009027~KEGG: ttj:TTHA0242 50S ribosomal protein L9~PFAM: Ribosomal protein L9-like~SPTR: B7A904 Ribosomal protein L9~TIGRFAM: ribosomal protein L9~PFAM: Ribosomal protein L9%2C N-terminal domain%3B Ribosomal protein L9%2C C-terminal domain~TIGRFAM: ribosomal protein L9 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0005 Trad_0006 Trad_0006 Trad_0006 6408 6692 - ribosomal protein S18 COGs: COG0238 Ribosomal protein S18~InterPro IPR001648~KEGG: ddr:Deide_00110 putative 30S ribosomal protein S18~PFAM: ribosomal protein S18~SPTR: C1CXK0 30S ribosomal protein S18~TIGRFAM: ribosomal protein S18~PFAM: Ribosomal protein S18~TIGRFAM: ribosomal protein S18 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0006 Trad_0007 Trad_0007 Trad_0007 6693 7541 - single-strand binding protein COGs: COG0629 Single-stranded DNA-binding protein~InterPro IPR000424:IPR011344:IPR016027:IPR012340~KEGG: dge:Dgeo_0165 single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n~SPTR: C1XJL0 Single-stranded DNA-binding protein~TIGRFAM: single-strand binding protein~PFAM: Single-strand binding protein family~TIGRFAM: single stranded DNA-binding protein (ssb) gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0007 Trad_0008 Trad_0008 Trad_0008 7590 7940 - ribosomal protein S6 COGs: COG0360 Ribosomal protein S6~InterPro IPR000529:IPR020814:IPR014717~KEGG: dge:Dgeo_0166 30S ribosomal protein S6~PFAM: Ribosomal protein S6%2C bacterial-like~SPTR: C1XS83 SSU ribosomal protein S6P~TIGRFAM: ribosomal protein S6~PFAM: Ribosomal protein S6~TIGRFAM: ribosomal protein S6 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0008 Trad_0009 Trad_0009 Trad_0009 8116 8838 + SNARE associated Golgi protein-like protein COGs: COG0398 conserved hypothetical protein~InterPro IPR015414~KEGG: hau:Haur_1237 SNARE associated Golgi protein~PFAM: SNARE associated Golgi protein~SPTR: A9B1K0 SNARE associated Golgi protein~PFAM: SNARE associated Golgi protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0009 Trad_0010 Trad_0010 Trad_0010 9119 9415 - YCII-related protein InterPro IPR005545:IPR011008~KEGG: YCII-related domain protein %3B K09780 hypothetical protein~PFAM: YCII-related~SPTR: C4CYG7 Uncharacterized conserved protein~PFAM: YCII-related domain gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0010 Trad_0011 Trad_0011 Trad_0011 9656 11530 + chaperone protein DnaK COGs: COG0443 Molecular chaperone~InterPro IPR012725:IPR013126:IPR001023:IPR018181~KEGG: tth:TTC1127 molecular chaperone DnaK~PFAM: Heat shock protein 70~SPTR: C1XQY4 Chaperone protein DnaK~TIGRFAM: chaperone protein DnaK~PFAM: Hsp70 protein~TIGRFAM: chaperone protein DnaK gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0011 Trad_0012 Trad_0012 Trad_0012 11532 12236 + GrpE protein COGs: COG0576 Molecular chaperone GrpE (heat shock protein)~InterPro IPR000740:IPR009012:IPR013805~KEGG: dge:Dgeo_2077 GrpE protein~PFAM: GrpE protein~SPTR: Q1IWL3 Protein grpE~PFAM: GrpE gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0012 Trad_0013 Trad_0013 Trad_0013 12280 13263 + heat shock protein DnaJ domain protein COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~InterProIPR001623:IPR002939:IPR003095:IPR008971:IPR 018253~KEGG: dge:Dgeo_2078 chaperone DnaJ-like protein~PFAM: heat shock protein DnaJ domain protein%3B chaperone DnaJ domain protein~SMART: heat shock protein DnaJ domain protein~SPTR: Q1IWL2 Chaperone DnaJ-like protein~PFAM: DnaJ domain%3B DnaJ C terminal region gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0013 Trad_0014 Trad_0014 Trad_0014 13462 14658 + PpiC-type peptidyl-prolyl cis-trans isomerase COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase~InterPro IPR000297~KEGG: dra:DR_1063 peptidyl-prolyl cis-trans isomerase C~PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~SPTR: Q9RVG6 Peptidyl-prolyl cis-trans isomerase C~PFAM: PPIC-type PPIASE domain gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0014 Trad_0015 Trad_0015 Trad_0015 14789 15418 - pyridoxamine 5'-phosphate oxidase COGs: COG0259 Pyridoxamine-phosphate oxidase~InterProIPR000659:IPR011576:IPR019576:IPR009002:IPR 012349:IPR019740~KEGG: bte:BTH_I0717 pyridoxamine 5'-phosphate oxidase~PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding%3B Pyridoxine 5'-phosphate oxidase%2C dimerisation-like~PRIAM: Pyridoxal 5'-phosphate synthase~SPTR: Q2T0M6 Pyridoxine/pyridoxamine 5'-phosphate oxidase~TIGRFAM: pyridoxamine 5'-phosphate oxidase~PFAM: Pyridoxamine 5'-phosphate oxidase%3B Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region~TIGRFAM: pyridoxamine-phosphate oxidase gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0015 Trad_0016 Trad_0016 Trad_0016 15524 15817 + conserved hypothetical protein KEGG: KLTH0F15928p~SPTR: C5DJF2 KLTH0F15928p gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0016 Trad_0017 Trad_0017 Trad_0017 15908 18022 + protein of unknown function DUF255 COGs: COG1331 Highly conserved protein containing a thioredoxin domain~InterPro IPR004879:IPR008928:IPR012336:IPR012335~KEGG: rxy:Rxyl_2540 hypothetical protein~PFAM: protein of unknown function DUF255~SPTR: Q1AT21 Putative uncharacterized protein~PFAM: Protein of unknown function%2C DUF255 gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0017 Trad_0018 Trad_0018 Trad_0018 18109 20448 + conserved hypothetical protein KEGG: ttj:TTHA0999 hypothetical protein~SPTR: C1XVZ8 ATP-dependent exonuclease V beta subunit%2C helicase and exonuclease domain-containing gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0018 Trad_0019 Trad_0019 Trad_0019 20445 23219 + UvrD/REP helicase COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)~InterPro IPR014016:IPR014017:IPR000212~KEGG: ttj:TTHA0998 ATP-dependent DNA helicase~PFAM: UvrD/REP helicase~SPTR: C1XVZ8 ATP-dependent exonuclease V beta subunit%2C helicase and exonuclease domain-containing~PFAM: UvrD/REP helicase gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0019 Trad_0020 Trad_0020 Trad_0020 23227 24087 - hypothetical protein KEGG: sus:Acid_6160 allergen V5/TPX-1 family protein~SPTR: Q01TD4 Allergen V5/Tpx-1 family protein gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0020 Trad_0021 Trad_0021 Trad_0021 24171 24596 + ribosomal protein L19 COGs: COG0335 Ribosomal protein L19~InterPro IPR001857:IPR018257~KEGG: ddr:Deide_07240 putative 50S ribosomal protein L19~PFAM: ribosomal protein L19~SPTR: C1D158 50S ribosomal protein L19~TIGRFAM: ribosomal protein L19~PFAM: Ribosomal protein L19~TIGRFAM: ribosomal protein L19%2C bacterial type gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0021 Trad_0022 Trad_0022 Trad_0022 24921 25226 + ribosomal protein L21 COGs: COG0261 Ribosomal protein L21~InterPro IPR001787~KEGG: ttj:TTHA1783 50S ribosomal protein L21~PFAM: ribosomal protein L21~SPTR: P60492 50S ribosomal protein L21~TIGRFAM: ribosomal protein L21~PFAM: Ribosomal prokaryotic L21 protein~TIGRFAM: ribosomal protein L21 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0022 Trad_0023 Trad_0023 Trad_0023 25247 25522 + ribosomal protein L27 COGs: COG0211 Ribosomal protein L27~InterPro IPR001684:IPR018261~KEGG: dge:Dgeo_2217 50S ribosomal protein L27~PFAM: ribosomal protein L27~SPTR: Q1IW73 50S ribosomal protein L27~TIGRFAM: ribosomal protein L27~PFAM: Ribosomal L27 protein~TIGRFAM: ribosomal protein L27 gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0023 Trad_0024 Trad_0024 Trad_0024 25757 27157 + GTP-binding protein Obg/CgtA COGs: COG0536 GTPase~InterProIPR014100:IPR005225:IPR015349:IPR006169:IPR 002917:IPR006073:IPR006074~KEGG: dge:Dgeo_2218 GTPase ObgE~PFAM: GTP1/OBG sub domain protein%3B GTP-binding protein HSR1-related%3B GTP1/OBG domain protein~SPTR: Q1IW72 GTPase obg~TIGRFAM: GTP-binding protein Obg/CgtA%3B small GTP-binding protein%3B Obg family GTPase CgtA~PFAM: GTPase of unknown function%3B GTP1/OBG%3B Domain of unknown function (DUF1967)~TIGRFAM: Obg family GTPase CgtA%3B Obg family GTPase CgtA%2C C-terminal extension%3B small GTP-binding protein domain gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0024 Trad_0025 Trad_0025 Trad_0025 27179 27751 + nicotinate (nicotinamide) nucleotide adenylyltransferase COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase~InterPro IPR004821:IPR005248:IPR004820:IPR014729~KEGG: ttj:TTHA1780 nicotinic acid mononucleotide adenylyltransferase~PFAM: cytidylyltransferase~PRIAM: Nicotinate-nucleotide adenylyltransferase~SPTR: B7A5T9 Nicotinate (Nicotinamide) nucleotide adenylyltransferase~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: Cytidylyltransferase~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0025 Trad_0026 Trad_0026 Trad_0026 27726 28319 + metal dependent phosphohydrolase COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism~InterPro IPR005249:IPR006674:IPR003607~KEGG: tth:TTC1420 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: C1XI98 Metal dependent phosphohydrolase~PFAM: HD domain~TIGRFAM: conserved hypothetical protein TIGR00488 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0026 Trad_0027 Trad_0027 Trad_0027 28380 29675 + cell envelope-related transcriptional attenuator COGs: COG1316 Transcriptional regulator~InterPro IPR004474~KEGG: dra:DR_2581 LytR/CspA/Psr family protein~PFAM: cell envelope-related transcriptional attenuator~SPTR: C1XI97 Cell envelope-related function transcriptional attenuator common domain~TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: Cell envelope-related transcriptional attenuator domain~TIGRFAM: cell envelope-related function transcriptional attenuator common domain gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0027 Trad_0028 Trad_0028 Trad_0028 29707 30069 + iojap-like protein COGs: COG0799 Iojap protein~InterPro IPR004394~KEGG: ttj:TTHA1777 hypothetical protein~PFAM: Iojap-related protein~SPTR: C1XSQ3 Iojap-related protein~TIGRFAM: iojap-like protein~PFAM: Domain of unknown function DUF143~TIGRFAM: iojap-related protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0028 Trad_0029 Trad_0029 Trad_0029 30075 30413 + protein of unknown function UPF0102 COGs: COG0792 endonuclease distantly related to Holliday junction resolvase~InterPro IPR003509:IPR011335~KEGG: ttj:TTHA0372 hypothetical protein~PFAM: protein of unknown function UPF0102~SPTR: B7A9I8 Putative uncharacterized protein~PFAM: Uncharacterised protein family UPF0102 gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0029 Trad_0030 Trad_0030 Trad_0030 30523 31134 + N-(5'phosphoribosyl)anthranilate isomerase (PRAI) COGs: COG0135 Phosphoribosylanthranilate isomerase~InterPro IPR001240:IPR011060:IPR013785~KEGG: gem:GM21_2257 phosphoribosylanthranilate isomerase~PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)~SPTR: C1XXV7 N-(5'-phosphoribosyl)anthranilate isomerase~PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0030 Trad_0031 Trad_0031 Trad_0031 31517 33187 + Methylcrotonoyl-CoA carboxylase COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)~InterPro IPR011762:IPR011763:IPR000022~KEGG: dge:Dgeo_0811 propionyl-CoA carboxylase~PFAM: carboxyl transferase~PRIAM: Methylcrotonoyl-CoA carboxylase~SPTR: C1XQB4 Acetyl-CoA carboxylase%2C carboxyltransferase component (Subunits alpha and beta)~PFAM: Carboxyl transferase domain gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0031 Trad_0032 Trad_0032 Trad_0032 33208 33705 - conserved hypothetical protein KEGG: aca:ACP_0152 hypothetical protein~SPTR: C1F8M4 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF664) gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0032 Trad_0033 Trad_0033 Trad_0033 34154 35818 + conserved hypothetical protein InterPro IPR011933~KEGG: rca:Rcas_1973 hypothetical protein~SPTR: A7NKP1 Conserved hypothetical membrane protein~TIGRFAM: conserved hypothetical protein~PFAM: Aerotolerance regulator N-terminal~TIGRFAM: N-terminal double-transmembrane domain gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0033 Trad_0034 Trad_0034 Trad_0034 35882 36205 + protein of unknown function DUF59 COGs: COG2151 metal-sulfur cluster biosynthetic protein~InterPro IPR002744~KEGG: ddr:Deide_11230 hypothetical protein~PFAM: protein of unknown function DUF59~SPTR: C1XNG6 Predicted metal-sulfur cluster biosynthetic enzyme~PFAM: Domain of unknown function DUF59 gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0034 Trad_0035 Trad_0035 Trad_0035 36240 36698 - protein of unknown function DUF163 COGs: COG1576 conserved hypothetical protein~InterPro IPR003742~KEGG: pth:PTH_2857 hypothetical protein~PFAM: protein of unknown function DUF163~SPTR: A5CY81 Ribosomal RNA large subunit methyltransferase H~PFAM: Predicted SPOUT methyltransferase~TIGRFAM: conserved hypothetical protein TIGR00246 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0035 Trad_0036 Trad_0036 Trad_0036 36717 37586 - thymidylate synthase%2C flavin-dependent COGs: COG1351 alternative thymidylate synthase~InterPro IPR003669~KEGG: ttj:TTHA1096 FAD-dependent thymidylate synthase~PFAM: thymidylate synthase complementing protein ThyX~SPTR: C8PQF4 Thymidylate synthase%2C flavin-dependent~TIGRFAM: thymidylate synthase%2C flavin-dependent~PFAM: Thymidylate synthase complementing protein~TIGRFAM: thymidylate synthase%2C flavin-dependent gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0036 Trad_0037 Trad_0037 Trad_0037 38205 41105 + S-layer domain protein InterPro IPR001119~KEGG: tth:TTC1532 S-layer protein~PFAM: S-layer domain protein~SPTR: P35830 S-layer protein~PFAM: S-layer homology domain gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0037 Trad_0038 Trad_0038 Trad_0038 41250 41918 + transferase hexapeptide repeat containing protein COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)~InterPro IPR001451:IPR011004:IPR018357~KEGG: dtu:Dtur_1633 transferase hexapeptide repeat containing protein~SPTR: B8E332 Transferase hexapeptide repeat containing protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0038 Trad_0039 Trad_0039 Trad_0039 41950 42600 + Rhomboid family protein COGs: COG0705 membrane protein~InterPro IPR002610~KEGG: ttj:TTHA1474 hypothetical protein~PFAM: Rhomboid family protein~SPTR: B7ABV4 Rhomboid family protein~PFAM: Rhomboid family gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0039 Trad_0040 Trad_0040 Trad_0040 42660 43328 + hypothetical protein KEGG: cyn:Cyan7425_4038 hypothetical protein~SPTR: B8HVP0 Putative uncharacterized protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0040 Trad_0041 Trad_0041 Trad_0041 43486 44058 - ribosomal subunit interface protein COGs: COG1544 Ribosome-associated protein Y (PSrp-1)~InterPro IPR003489~KEGG: dge:Dgeo_1384 sigma 54 modulation protein/ribosomal protein S30EA~PFAM: sigma 54 modulation protein/ribosomal protein S30EA~SPTR: Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA~TIGRFAM: ribosomal subunit interface protein~PFAM: Sigma 54 modulation protein / S30EA ribosomal protein~TIGRFAM: ribosomal subunit interface protein gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0041 Trad_0042 Trad_0042 Trad_0042 44472 44816 + transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845:IPR011991~KEGG: ddr:Deide_2p00101 putative transcriptional regulator%2C ArsR family~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: C1XMQ5 Transcriptional regulator%2C ArsR family~PFAM: Bacterial regulatory protein%2C arsR family gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0042 Trad_0043 Trad_0043 Trad_0043 44820 45608 + cation efflux protein COGs: COG1230 Co/Zn/Cd efflux system component~InterPro IPR006121:IPR002524~KEGG: prw:PsycPRwf_0699 cation efflux protein~PFAM: cation efflux protein~SPTR: A2TNV0 Integral membrane protein~PFAM: Cation efflux family%3B Heavy-metal-associated domain gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0043 Trad_0044 Trad_0044 Trad_0044 45840 47465 + conserved hypothetical protein COGs: COG3666 Transposase and inactivated derivatives~KEGG: ana:alr7249 hypothetical protein~SPTR: Q8YKP4 Alr7249 protein~PFAM: Transposase domain (DUF772) gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0044 Trad_0045 Trad_0045 Trad_0045 47715 47954 - cell division topological specificity factor MinE COGs: COG0851 Septum formation topological specificity factor~InterPro IPR005527~KEGG: ttj:TTHA1242 cell division inhibitor MinE~PFAM: Septum formation topological specificity factor MinE~SPTR: C1XUL0 Cell division topological specificity factor MinE~TIGRFAM: cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE~TIGRFAM: cell division topological specificity factor MinE gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0045 Trad_0046 Trad_0046 Trad_0046 47954 48760 - septum site-determining protein MinD COGs: COG2894 Septum formation inhibitor-activating ATPase~InterPro IPR010223:IPR002586~KEGG: ttj:TTHA1243 septum site-determining protein MinD~PFAM: Cobyrinic acid ac-diamide synthase~SPTR: C1XUL1 Septum site-determining protein MinD~TIGRFAM: septum site-determining protein MinD~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: septum site-determining protein MinD gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0046 Trad_0047 Trad_0047 Trad_0047 49011 52331 - UvrD/REP helicase COGs: COG0210 Superfamily I DNA and RNA helicase~InterProIPR006141:IPR014016:IPR014017:IPR000212:IPR 003586~KEGG: dge:Dgeo_0868 UvrD/REP helicase~PFAM: UvrD/REP helicase~SMART: Hedgehog/intein hint domain protein~SPTR: B4VQT2 UvrD/REP helicase subfamily~PFAM: UvrD/REP helicase~TIGRFAM: intein N-terminal splicing region%3B intein C-terminal splicing region gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0047 Trad_0048 Trad_0048 Trad_0048 52380 53330 - DNA-3-methyladenine glycosylase II COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase~InterPro IPR011257~KEGG: mac:MA3207 DNA-3-methyladenine glycosylase II~SPTR: Q8TL35 DNA-3-methyladenine glycosylase II gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0048 Trad_0049 Trad_0049 Trad_0049 53391 53957 + Protein of unknown function DUF2227%2C metal-binding protein COGs: COG2389 Uncharacterized metal-binding protein~InterPro IPR019250~KEGG: dra:DR_1889 hypothetical protein~PFAM: Protein of unknown function DUF2227%2C metal-binding~SPTR: C1XUS9 Uncharacterized metal-binding protein~PFAM: Uncharacterized metal-binding protein (DUF2227) gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0049 Trad_0050 Trad_0050 Trad_0050 54053 55123 + extracellular solute-binding protein family 1 COGs: COG0687 Spermidine/putrescine-binding periplasmic protein~InterPro IPR006059:IPR001188~KEGG: cyc:PCC7424_1221 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: B7K7A1 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0050 Trad_0051 Trad_0051 Trad_0051 55170 56282 + spermidine/putrescine ABC transporter ATPase subunit COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterProIPR003439:IPR005893:IPR013611:IPR008995:IPR 003593:IPR017871~KEGG: sti:Sthe_1276 spermidine/putrescine ABC transporter ATPase subunit~PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~SPTR: D1C394 Spermidine/putrescine ABC transporter ATPase subunit~TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit~PFAM: ABC transporter%3B TOBE domain~TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0051 Trad_0052 Trad_0052 Trad_0052 56350 58404 - TRAP transporter%2C 4TM/12TM fusion protein COGs: COG4666 TRAP-type uncharacterized transport system fused permease components~InterPro IPR011853:IPR010656~KEGG: amt:Amet_4705 TRAP transporter%2C 4TM/12TM fusion protein~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit~SPTR: A3JCL7 Hypothetical permease~TIGRFAM: TRAP transporter%2C 4TM/12TM fusion protein~PFAM: DctM-like transporters~TIGRFAM: TRAP transporter%2C 4TM/12TM fusion protein gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0052 Trad_0053 Trad_0053 Trad_0053 58401 58889 - Domain of unknown function DUF1850 InterPro IPR015001~KEGG: bbe:BBR47_09150 hypothetical protein~PFAM: Domain of unknown function DUF1850~SPTR: A3VFZ1 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF1850) gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0053 Trad_0054 Trad_0054 Trad_0054 58893 59861 - TRAP transporter solute receptor%2C TAXI family COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component~InterPro IPR011852:IPR015168~KEGG: afu:AF0635 immunogenic protein (bcsp31-2)~PFAM: NMT1/THI5 like domain protein~SPTR: A3JCL9 Immunogenic protein~TIGRFAM: TRAP transporter solute receptor%2C TAXI family~PFAM: NMT1/THI5 like~TIGRFAM: TRAP transporter solute receptor%2C TAXI family gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0054 Trad_0055 Trad_0055 Trad_0055 59968 61209 - L-carnitine dehydratase/bile acid-inducible protein F COGs: COG1804 acyl-CoA transferase/carnitine dehydratase~InterPro IPR003673~KEGG: ttj:TTHA1887 CaiB/BaiF family protein~PFAM: L-carnitine dehydratase/bile acid-inducible protein F~SPTR: C1XSG3 Predicted acyl-CoA transferase/carnitine dehydratase~manually curated~PFAM: CoA-transferase family III gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0055 Trad_0056 Trad_0056 Trad_0056 61421 62080 + hypothetical protein KEGG: tro:trd_A0513 hypothetical protein~SPTR: B9L3Z9 Putative uncharacterized protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0056 Trad_0057 Trad_0057 Trad_0057 62206 63411 + acyl-CoA dehydrogenase domain protein COGs: COG1960 Acyl-CoA dehydrogenase~InterProIPR006092:IPR006091:IPR006090:IPR009100:IPR 009075:IPR013786:IPR013764:IPR006089~KEGG: tth:TTC0435 glutaryl-CoA dehydrogenase~PFAM: acyl-CoA dehydrogenase domain protein~SPTR: Q72KT2 Glutaryl-CoA dehydrogenase~PFAM: Acyl-CoA dehydrogenase%2C C-terminal domain%3B Acyl-CoA dehydrogenase%2C middle domain%3B Acyl-CoA dehydrogenase%2C N-terminal domain gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0057 Trad_0058 Trad_0058 Trad_0058 63493 64578 + peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase InterPro IPR005079~KEGG: hoh:Hoch_4555 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase~PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase~SPTR: A6GBF3 Peptidase C45%2C acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase~PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0058 Trad_0059 Trad_0059 Trad_0059 64594 65226 + GCN5-related N-acetyltransferase InterPro IPR000182:IPR016181~KEGG: rca:Rcas_0119 hypothetical protein~PFAM: GCN5-related N-acetyltransferase~SPTR: A7NFM9 Putative uncharacterized protein~PFAM: Acetyltransferase (GNAT) family gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0059 Trad_0060 Trad_0060 Trad_0060 65211 66380 + FAD dependent oxidoreductase COGs: COG0665 Glycine/D-amino acid oxidase (deaminating)~InterPro IPR006076~KEGG: ddr:Deide_1p00040 putative FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase~SPTR: C1XF90 Glycine/D-amino acid oxidase%2C deaminating~PFAM: FAD dependent oxidoreductase gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0060 Trad_0061 Trad_0061 Trad_0061 66399 67307 + ornithine cyclodeaminase/mu-crystallin COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog~InterPro IPR003462:IPR016040~KEGG: rxy:Rxyl_2927 ornithine cyclodeaminase~PFAM: ornithine cyclodeaminase/mu-crystallin~SPTR: Q1ARZ1 Ornithine cyclodeaminase~PFAM: Ornithine cyclodeaminase/mu-crystallin family gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0061 Trad_0062 Trad_0062 Trad_0062 67338 68495 - arginine biosynthesis bifunctional protein ArgJ COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase)~InterPro IPR002813:IPR016117~KEGG: ddr:Deide_10200 putative arginine biosynthesis bifunction~PFAM: arginine biosynthesis protein ArgJ~PRIAM: Amino-acid N-acetyltransferase~SPTR: C1CUN5 Putative Arginine biosynthesis bifunction~TIGRFAM: arginine biosynthesis bifunctional protein ArgJ~PFAM: ArgJ family~TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0062 Trad_0063 Trad_0063 Trad_0063 68492 69571 - N-acetyl-gamma-glutamyl-phosphate reductase COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase~InterPro IPR000706:IPR000534:IPR012280:IPR016040~KEGG: ttj:TTHA1197 N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase NAD - binding%3B Semialdehyde dehydrogenase dimerisation region~PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase~SPTR: Q5SJ17 N-acetyl-gamma-glutamyl-phosphate reductase~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase%2C common form gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0063 Trad_0064 Trad_0064 Trad_0064 69568 70512 - ornithine carbamoyltransferase COGs: COG0078 Ornithine carbamoyltransferase~InterPro IPR002292:IPR006132:IPR006131:IPR006130~KEGG: dge:Dgeo_1605 ornithine carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region%3B aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain~PRIAM: Ornithine carbamoyltransferase~SPTR: C1XTU2 Ornithine carbamoyltransferase~TIGRFAM: ornithine carbamoyltransferase~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain~TIGRFAM: ornithine carbamoyltransferase gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0064 Trad_0065 Trad_0065 Trad_0065 70645 71310 - peptidase A24A prepilin type IV InterPro IPR000045~KEGG: dra:DR_2065 prepilin peptidase%2C type IV~PFAM: peptidase A24A prepilin type IV~SPTR: Q9RSQ9 Prepilin peptidase%2C type IV~PFAM: Type IV leader peptidase family gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0065 Trad_0066 Trad_0066 Trad_0066 71298 71837 - peptidase A24A domain protein COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase~InterPro IPR010627:IPR000045~KEGG: ddr:Deide_21130 putative prepilin peptidase (type 4 prepilin-like proteins leader peptide-processing enzyme) (peptidase A24A-like protein)~PFAM: peptidase A24A domain protein%3B peptidase A24A prepilin type IV~SPTR: C1CYV7 Putative Prepilin peptidase (Type 4 prepilin-like proteins leader peptide-processing enzyme) (Peptidase A24A-like protein)~PFAM: Bacterial Peptidase A24 N-terminal domain%3B Type IV leader peptidase family gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0066 Trad_0067 Trad_0067 Trad_0067 71963 72499 + outer membrane chaperone Skp (OmpH) InterPro IPR005632~KEGG: tth:TTC0475 putative cationic outer membrane protein OmpH~PFAM: outer membrane chaperone Skp (OmpH)~SPTR: Q72K52 Putative cationic outer membrane protein ompH~PFAM: Outer membrane protein (OmpH-like) gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0067 Trad_0068 Trad_0068 Trad_0068 72597 73340 - tRNA (guanine-N1)-methyltransferase COGs: COG0336 tRNA-(guanine-N1)-methyltransferase~InterPro IPR002649:IPR016009~KEGG: dra:DR_2011 tRNA (guanine-N1)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase~PRIAM: tRNA (guanine-N(1)-)-methyltransferase~SPTR: C1XQ20 tRNA (guanine-N(1)-)-methyltransferase~TIGRFAM: tRNA (guanine-N1)-methyltransferase~PFAM: tRNA (Guanine-1)-methyltransferase~TIGRFAM: tRNA (guanine-N1)-methyltransferase gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0068 Trad_0069 Trad_0069 Trad_0069 73398 73913 - 16S rRNA processing protein RimM COGs: COG0806 RimM protein required for 16S rRNA processing~InterPro IPR011961:IPR002676:IPR011033~KEGG: ttj:TTHA1033 16S rRNA-processing protein RimM~PFAM: RimM protein~SPTR: Q5SJH5 Ribosome maturation factor rimM~TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM N-terminal domain~TIGRFAM: 16S rRNA processing protein RimM gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0069 Trad_0070 Trad_0070 Trad_0070 73917 74150 - conserved hypothetical protein COGs: COG1837 RNA-binding protein (contains KH domain)~InterPro IPR004088:IPR009019~KEGG: dge:Dgeo_1484 hypothetical protein~SPTR: B6GBS1 Putative uncharacterized protein~PFAM: KH domain gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0070 Trad_0071 Trad_0071 Trad_0071 74224 74538 - ribosomal protein S16 COGs: COG0228 Ribosomal protein S16~InterPro IPR000307~KEGG: ttj:TTHA1035 30S ribosomal protein S16~PFAM: ribosomal protein S16~SPTR: B7A7I5 Ribosomal protein S16~TIGRFAM: ribosomal protein S16~PFAM: Ribosomal protein S16~TIGRFAM: ribosomal protein S16 gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0071 Trad_0072 Trad_0072 Trad_0072 74651 75970 - signal recognition particle protein COGs: COG0541 Signal recognition particle GTPase~InterProIPR004780:IPR013822:IPR000897:IPR004125:IPR 003593~KEGG: dge:Dgeo_1440 signal recognition particle protein~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle%3B Signal peptide binding (SRP54) M- domain protein~SMART: AAA ATPase~SPTR: C1XNM7 Signal recognition particle subunit FFH/SRP54 (Srp54)~TIGRFAM: signal recognition particle protein~PFAM: SRP54-type protein%2C GTPase domain%3B SRP54-type protein%2C helical bundle domain%3B Signal peptide binding domain~TIGRFAM: signal recognition particle protein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0072 Trad_0073 Trad_0073 Trad_0073 76103 77494 + Tetratricopeptide TPR_2 repeat protein InterProIPR019734:IPR013026:IPR001440:IPR013105:IPR 011990~KEGG: dra:DR_0121 hypothetical protein~PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein~SPTR: C1XZG9 Tetratricopeptide repeat protein gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0073 Trad_0074 Trad_0074 Trad_0074 77555 78085 + Lipoprotein LpqB%2C GerMN domain protein COGs: COG5401 Spore germination protein~InterPro IPR019606~KEGG: sti:Sthe_0621 spore germination protein-like protein~PFAM: Lipoprotein LpqB%2C GerMN domain~SPTR: D1C1E1 Spore germination protein-like protein~PFAM: Sporulation and spore germination gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0074 Trad_0075 Trad_0075 Trad_0075 78565 80490 + PpiC-type peptidyl-prolyl cis-trans isomerase InterPro IPR000297~KEGG: ttj:TTHA0352 peptidyl-prolyl cis-trans isomerase~PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~SPTR: B7ABE7 PpiC-type peptidyl-prolyl cis-trans isomerase~PFAM: PPIC-type PPIASE domain gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0075 Trad_0076 Trad_0076 Trad_0076 80609 82168 + phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)~InterPro IPR002695:IPR011607:IPR013982~KEGG: ttj:TTHA0930 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme formylation region%3B MGS domain protein~PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase~SMART: AICARFT/IMPCHase bienzyme formylation region~SPTR: Q72K86 Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme%3B MGS-like domain~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0076 Trad_0077 Trad_0077 Trad_0077 82597 86307 + ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent COGs: COG1372 Intein/homing endonuclease~InterProIPR006141:IPR004042:IPR013344:IPR013509:IPR 000788:IPR006142:IPR003587:IPR003586:IPR003006~KEGG: dra:DR_2374 ribonucleoside-diphosphate reductase-related protein~PFAM: ribonucleotide reductase large subunit%3B Ribonucleotide reductase large subunit domain protein~SMART: Hedgehog/intein hint domain protein~SPTR: Q9RRW1 Ribonucleoside-diphosphate reductase~TIGRFAM: ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~PFAM: Ribonucleotide reductase%2C all-alpha domain%3B Ribonucleotide reductase%2C barrel domain~TIGRFAM: intein N-terminal splicing region%3B ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent%3B intein C-terminal splicing region gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0077 Trad_0078 Trad_0078 Trad_0078 91876 94434 - peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209:IPR007280~KEGG: dra:DR_A0283 serine protease~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B peptidase domain protein~SPTR: Q9RYM8 Probable subtilase-type serine protease DR_A0283~PFAM: Bacterial pre-peptidase C-terminal domain%3B Subtilase family gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0078 Trad_0079 Trad_0079 Trad_0079 94444 96117 - hypothetical protein InterPro IPR008969:IPR014766~KEGG: ttj:TTHA0285 hypothetical protein~SPTR: B7A934 Putative uncharacterized protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0079 Trad_0080 Trad_0080 Trad_0080 96612 98525 + arginine decarboxylase COGs: COG1166 Arginine decarboxylase (spermidine biosynthesis)~InterPro IPR002985:IPR000183~KEGG: ddr:Deide_04410 putative arginine decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~SPTR: C1D018 Arginine decarboxylase~TIGRFAM: arginine decarboxylase~PFAM: Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain%3B Pyridoxal-dependent decarboxylase%2C pyridoxal binding domain~TIGRFAM: arginine decarboxylase%2C biosynthetic gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0080 Trad_0081 Trad_0081 Trad_0081 98907 99905 - Mg2 transporter protein CorA family protein COGs: COG0598 Mg2+ and Co2+ transporter~InterPro IPR002523~KEGG: dge:Dgeo_0150 Mg2+ transporter protein%2C CorA-like protein~PFAM: Mg2 transporter protein CorA family protein~SPTR: Q1J231 Mg2+ transporter protein%2C CorA-like protein~PFAM: CorA-like Mg2+ transporter protein~TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0081 Trad_0082 Trad_0082 Trad_0082 100057 100626 + Clp domain protein COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterPro IPR004176~KEGG: dge:Dgeo_1215 ATPase AAA-2~PFAM: Clp domain protein~SPTR: Q1IZ22 ATPase AAA-2~PFAM: Clp amino terminal domain gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0082 Trad_0083 Trad_0083 Trad_0083 100630 101475 + imidazoleglycerol phosphate synthase%2C cyclase subunit COGs: COG0107 Imidazoleglycerol-phosphate synthase~InterPro IPR004651:IPR006062:IPR011060:IPR013785~KEGG: dra:DR_0732 imidazole glycerol phosphate synthase subunit HisF~PFAM: histidine biosynthesis protein~SPTR: B9XMG0 Imidazole glycerol phosphate synthase subunit hisF~TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit~PFAM: Histidine biosynthesis protein~TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0083 Trad_0084 Trad_0084 Trad_0084 101472 101669 + conserved hypothetical protein KEGG: cyh:Cyan8802_1845 hypothetical protein~SPTR: C0GV20 Putative uncharacterized protein gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0084 Trad_0085 Trad_0085 Trad_0085 101662 101997 + conserved hypothetical protein InterPro IPR011067~KEGG: cyh:Cyan8802_1846 hypothetical protein~SPTR: C7QV65 Putative uncharacterized protein~manually curated~PFAM: PemK-like protein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0085 Trad_0086 Trad_0086 Trad_0086 101994 103136 + Cys/Met metabolism pyridoxal-phosphate-dependent protein COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR000277:IPR015424:IPR015421:IPR015422~KEGG: rca:Rcas_3473 cystathionine gamma-synthase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~SPTR: A7NPM7 Cystathionine gamma-synthase~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0086 Trad_0087 Trad_0087 Trad_0087 103138 103794 + phosphoribulokinase / uridine kinase family COGs: COG1072 Panthothenate kinase~KEGG: ara:Arad_12443 phosphoribulokinase / uridine kinase family~SPTR: C1RLE1 Putative uncharacterized protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0087 Trad_0088 Trad_0088 Trad_0088 103897 104907 + deoxyhypusine synthase COGs: COG1899 Deoxyhypusine synthase~InterPro IPR002773~KEGG: rca:Rcas_3399 deoxyhypusine synthase~PFAM: deoxyhypusine synthase~SPTR: A7NPF3 Deoxyhypusine synthase~PFAM: Deoxyhypusine synthase~TIGRFAM: deoxyhypusine synthase gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0088 Trad_0089 Trad_0089 Trad_0089 104929 105201 - conserved hypothetical protein KEGG: noc:Noc_0436 hypothetical protein~SPTR: Q3JDY6 Putative uncharacterized protein gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0089 Trad_0090 Trad_0090 Trad_0090 105351 106108 - pseudogene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0090 Trad_0091 Trad_0091 Trad_0091 106240 106836 - transcriptional regulator%2C TetR family InterPro IPR001647:IPR009057:IPR012287~KEGG: hau:Haur_1751 TetR family transcriptional regulator~PFAM: regulatory protein TetR~SPTR: Q0YPN1 Regulatory protein%2C TetR~PFAM: Bacterial regulatory proteins%2C tetR family gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0091 Trad_0092 Trad_0092 Trad_0092 106937 108148 + putative cytochrome P450 COGs: COG2124 Cytochrome P450~InterPro IPR002397:IPR001128:IPR006162:IPR017972~KEGG: hoh:Hoch_4349 putative cytochrome P450~SPTR: D0LMD7 Putative cytochrome P450~PFAM: Cytochrome P450 gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0092 Trad_0093 Trad_0093 Trad_0093 108295 108822 + conserved hypothetical protein KEGG: aba:Acid345_4635 hypothetical protein~SPTR: C4CXI2 Predicted membrane protein%2C COG3918 gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0093 Trad_0094 Trad_0094 Trad_0094 108991 110190 + alanine dehydrogenase/PNT domain protein COGs: COG3288 NAD/NADP transhydrogenase alpha subunit~InterPro IPR007886:IPR007698:IPR016040:IPR008143~KEGG: ote:Oter_4580 NAD(P) transhydrogenase subunit alpha~PFAM: alanine dehydrogenase/PNT domain protein~SPTR: B4CXA0 NAD(P)(+) transhydrogenase (AB-specific)~PFAM: Alanine dehydrogenase/PNT%2C C-terminal domain%3B Alanine dehydrogenase/PNT%2C N-terminal domain~TIGRFAM: NAD(P) transhydrogenase%2C alpha subunit gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0094 Trad_0095 Trad_0095 Trad_0095 110174 110473 + putative NAD(P) transhydrogenase subunit alpha COGs: COG3288 NAD/NADP transhydrogenase alpha subunit~KEGG: ote:Oter_4579 putative NAD(P) transhydrogenase subunit alpha~SPTR: B5JJ24 Putative uncharacterized protein gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0095 Trad_0096 Trad_0096 Trad_0096 110475 111866 + NAD(P)(+) transhydrogenase (AB-specific) COGs: COG1282 NAD/NADP transhydrogenase beta subunit~InterPro IPR012136:IPR004003~KEGG: ote:Oter_4578 NAD(P)(+) transhydrogenase (AB-specific)~PFAM: NAD(P) transhydrogenase beta subunit~PRIAM: NAD(P)(+) transhydrogenase (AB-specific)~SPTR: A0YCU4 NAD(P) transhydrogenase subunit beta~PFAM: NAD(P) transhydrogenase beta subunit gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0096 Trad_0097 Trad_0097 Trad_0097 112874 114700 + Lytic transglycosylase catalytic COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains)~InterProIPR019734:IPR013026:IPR011717:IPR008258:IPR 011990~KEGG: ttj:TTHA1471 putative transglycosylase~PFAM: Lytic transglycosylase catalytic%3B Tetratricopeptide TPR_4~SPTR: Q72IM5 Putative uncharacterized protein~PFAM: Transglycosylase SLT domain gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0097 Trad_0098 Trad_0098 Trad_0098 114727 115251 + conserved hypothetical protein InterPro IPR018062~KEGG: npu:Npun_F2200 hypothetical protein~SPTR: B2J699 Putative uncharacterized protein~PFAM: HPP family gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0098 Trad_0099 Trad_0099 Trad_0099 115273 115779 - NUDIX hydrolase InterPro IPR000086:IPR015797~KEGG: tro:trd_A0271 NUDIX hydrolase%2C putative~PFAM: NUDIX hydrolase~SPTR: D1C9D6 NUDIX hydrolase~PFAM: NUDIX domain gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0099 Trad_0100 Trad_0100 Trad_0100 115882 117804 - polysaccharide biosynthesis protein CapD COGs: COG1086 nucleoside-diphosphate sugar epimerase~InterPro IPR003781:IPR003869:IPR016040~KEGG: cts:Ctha_2155 polysaccharide biosynthesis protein CapD~PFAM: polysaccharide biosynthesis protein CapD%3B CoA-binding domain protein~SPTR: B3QVK6 Polysaccharide biosynthesis protein CapD~PFAM: Polysaccharide biosynthesis protein gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0100 Trad_0101 Trad_0101 Trad_0101 118411 119424 + GCN5-related N-acetyltransferase InterPro IPR000182:IPR016181~KEGG: chl:Chy400_2316 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: C1XFQ1 Sortase-like acyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0101 Trad_0102 Trad_0102 Trad_0102 119684 120367 + sugar transferase COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR003362~KEGG: pca:Pcar_1529 putative YVfC-like sugar transferase~PFAM: sugar transferase~SPTR: Q3A4D2 Putative YVfC-like sugar transferase~PFAM: Bacterial sugar transferase gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0102 Trad_0103 Trad_0103 Trad_0103 120364 121449 + protein of unknown function DUF201 COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)~InterPro IPR011761:IPR003806~KEGG: reu:Reut_A2484 carbamoyl phosphate synthase-like protein~PFAM: protein of unknown function DUF201~SPTR: Q46YD8 Putative uncharacterized protein~PFAM: ATP-grasp domain gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0103 Trad_0104 Trad_0104 Trad_0104 121468 122526 + hypothetical protein KEGG: gbm:Gbem_1795 hypothetical protein~SPTR: B9ZER4 Putative uncharacterized protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0104 Trad_0105 Trad_0105 Trad_0105 122523 123722 - cobalamin synthesis protein P47K COGs: COG0523 Putative GTPase (G3E family)~InterPro IPR003495:IPR011629~KEGG: rca:Rcas_2945 cobalamin synthesis protein P47K~PFAM: cobalamin synthesis protein P47K%3B cobalamin synthesis CobW domain protein~SPTR: A7NN74 Cobalamin synthesis protein P47K~PFAM: Cobalamin synthesis protein cobW C-terminal domain%3B CobW/HypB/UreG%2C nucleotide-binding domain gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0105 Trad_0106 Trad_0106 Trad_0106 124197 125171 - ribonucleotide reductase COGs: COG0208 Ribonucleotide reductase beta subunit~InterPro IPR000358:IPR009078:IPR012348~KEGG: sru:SRU_0131 ribonucleoside-diphosphate reductase%2C beta subunit~PFAM: ribonucleotide reductase~SPTR: Q2S697 Ribonucleoside-diphosphate reductase%2C beta subunit~PFAM: Ribonucleotide reductase%2C small chain gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0106 Trad_0107 Trad_0107 Trad_0107 125171 126835 - ribonucleoside-diphosphate reductase%2C alpha chain InterPro IPR013350:IPR000788~KEGG: dno:DNO_0607 ribonucleotide-diphosphate reductase subunit alpha~PFAM: ribonucleotide reductase large subunit~SPTR: C8N7R7 Ribonucleoside-diphosphate reductase%2C alpha subunit~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha chain~PFAM: Ribonucleotide reductase%2C barrel domain~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha chain gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0107 Trad_0108 Trad_0108 Trad_0108 126832 127383 - thioesterase superfamily protein COGs: COG1607 Acyl-CoA hydrolase~InterPro IPR006683~KEGG: sru:SRU_0133 thioesterase family protein~PFAM: thioesterase superfamily protein~SPTR: Q2S695 Thioesterase family protein~PFAM: Thioesterase superfamily gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0108 Trad_0109 Trad_0109 Trad_0109 127720 128070 + hypothetical protein KEGG: SORBIDRAFT_02g000410%3B hypothetical protein~SPTR: C4RIM3 Phosphoribosyltransferase gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0109 Trad_0110 Trad_0110 Trad_0110 128327 129268 + periplasmic binding protein COGs: COG4558 ABC-type hemin transport system periplasmic component~InterPro IPR002491~KEGG: ttj:TTHB220 hemin ABC transporter%2C periplasmic hemin-binding protein~PFAM: periplasmic binding protein~SPTR: C1XQC8 ABC-type hemin transport system%2C periplasmic component~PFAM: Periplasmic binding protein gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0110 Trad_0111 Trad_0111 Trad_0111 129280 130179 + periplasmic binding protein COGs: COG4558 ABC-type hemin transport system periplasmic component~InterPro IPR002491~KEGG: ttj:TTHB220 hemin ABC transporter%2C periplasmic hemin-binding protein~PFAM: periplasmic binding protein~SPTR: C1XQC8 ABC-type hemin transport system%2C periplasmic component~PFAM: Periplasmic binding protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0111 Trad_0112 Trad_0112 Trad_0112 130176 131207 + transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: tth:TT_P0178 hemin transport system permease protein HmuU~PFAM: transport system permease protein~SPTR: C1XW08 ABC-type Fe3+-siderophore transport system%2C permease component~PFAM: FecCD transport family gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0112 Trad_0113 Trad_0113 Trad_0113 131200 132009 + ABC transporter related protein COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components~InterPro IPR003439:IPR003593:IPR017871~KEGG: tth:TT_P0177 transporter~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: B7AB93 ABC transporter related~PFAM: ABC transporter gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0113 Trad_0114 Trad_0114 Trad_0114 132028 132621 + Antibiotic biosynthesis monooxygenase InterPro IPR007138:IPR011008~KEGG: dge:Dgeo_2196 antibiotic biosynthesis monooxygenase~PFAM: Antibiotic biosynthesis monooxygenase~SPTR: A7BZR6 Antibiotic biosynthesis monooxygenase~PFAM: Antibiotic biosynthesis monooxygenase gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0114 Trad_0115 Trad_0115 Trad_0115 132657 133616 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase~InterPro IPR006139:IPR006140:IPR016040~KEGG: gym:GYMC10_5362 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~SPTR: D1C9F2 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0115 Trad_0116 Trad_0116 Trad_0116 133687 134589 - hypothetical protein KEGG: cpb:Cphamn1_0745 hypothetical protein~SPTR: B3ENG8 Putative uncharacterized protein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0116 Trad_0117 Trad_0117 Trad_0117 134586 134768 - conserved hypothetical protein KEGG: dac:Daci_2436 hypothetical protein~SPTR: A9BVK7 Putative uncharacterized protein gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0117 Trad_0118 Trad_0118 Trad_0118 134765 135295 - conserved hypothetical protein COGs: COG4185 conserved hypothetical protein~KEGG: pph:Ppha_0746 hypothetical protein~SPTR: B4SEE8 Putative uncharacterized protein~PFAM: Zeta toxin gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0118 Trad_0119 Trad_0119 Trad_0119 135297 135950 - type III restriction system methylase InterPro IPR002296~KEGG: dge:Dgeo_0927 type III restriction system methylase~SPTR: Q1IZV5 Type III restriction system methylase~PFAM: N-6 DNA Methylase gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0119 Trad_0120 Trad_0120 Trad_0120 136117 137595 - Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR015590:IPR016161:IPR016162:IPR016160~KEGG: sth:STH722 succinate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: Q67RI6 Succinate-semialdehyde dehydrogenase~PFAM: Aldehyde dehydrogenase family~TIGRFAM: succinate-semialdehyde dehydrogenase gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0120 Trad_0121 Trad_0121 Trad_0121 137588 138949 - 4-aminobutyrate aminotransferase COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase~InterPro IPR004632:IPR005814:IPR015424:IPR015421~KEGG: chl:Chy400_3624 aminotransferase class-III~PFAM: aminotransferase class-III~SPTR: C1XG95 4-aminobutyrate aminotransferase~TIGRFAM: 4-aminobutyrate aminotransferase~PFAM: Aminotransferase class-III~TIGRFAM: 4-aminobutyrate aminotransferase%2C prokaryotic type gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0121 Trad_0122 Trad_0122 Trad_0122 139100 140452 - amine oxidase COGs: COG1231 Monoamine oxidase~InterPro IPR002937:IPR001613~KEGG: cag:Cagg_2955 amine oxidase~PFAM: amine oxidase~SPTR: B8G682 Amine oxidase~PFAM: Flavin containing amine oxidoreductase gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0122 Trad_0123 Trad_0123 Trad_0123 140449 141132 - GCN5-related N-acetyltransferase InterPro IPR016181~KEGG: chl:Chy400_3625 GCN5-related N-acetyltransferase~SPTR: B9LDA5 GCN5-related N-acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0123 Trad_0124 Trad_0124 Trad_0124 141722 142576 + binding-protein-dependent transport systems inner membrane component COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I~InterPro IPR000515~KEGG: tro:trd_0522 spermidine/putrescine transport system permease protein PotB~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B9KYH6 Spermidine/putrescine transport system permease protein potB~PFAM: Binding-protein-dependent transport system inner membrane component gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0124 Trad_0125 Trad_0125 Trad_0125 142604 143515 + binding-protein-dependent transport systems inner membrane component COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II~InterPro IPR000515~KEGG: ter:Tery_2817 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q110T1 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0125 Trad_0126 Trad_0126 Trad_0126 143678 144670 + conserved hypothetical protein COGs: COG3181 conserved hypothetical protein~InterPro IPR005064~KEGG: csa:Csal_1453 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: Q1QXK2 Uncharacterized protein UPF0065~PFAM: Tripartite tricarboxylate transporter family receptor gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0126 Trad_0127 Trad_0127 Trad_0127 144676 145116 + putative tricarboxylic transport membrane protein KEGG: csa:Csal_1454 putative tricarboxylic transport membrane protein~SPTR: C1XGJ9 Putative uncharacterized protein~PFAM: Tripartite tricarboxylate transporter TctB family gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0127 Trad_0128 Trad_0128 Trad_0128 145117 146637 + protein of unknown function DUF112 transmembrane COGs: COG3333 conserved hypothetical protein~InterPro IPR002823~KEGG: pmy:Pmen_1455 hypothetical protein~PFAM: protein of unknown function DUF112 transmembrane~SPTR: C1XW64 Uncharacterized conserved protein~PFAM: Tripartite tricarboxylate transporter TctA family gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0128 Trad_0129 Trad_0129 Trad_0129 146641 147564 - diacylglycerol kinase catalytic region COGs: COG1597 Sphingosine kinase~InterPro IPR001206~KEGG: dge:Dgeo_1293 diacylglycerol kinase%2C catalytic region~PFAM: diacylglycerol kinase catalytic region~SMART: diacylglycerol kinase catalytic region~SPTR: Q1IYU5 Diacylglycerol kinase%2C catalytic region~PFAM: Diacylglycerol kinase catalytic domain gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0129 Trad_0130 Trad_0130 Trad_0130 147741 148985 + Glycine hydroxymethyltransferase COGs: COG0112 Glycine/serine hydroxymethyltransferase~InterPro IPR001085:IPR015424:IPR015421:IPR019798~KEGG: dge:Dgeo_0221 serine hydroxymethyltransferase~PFAM: glycine hydroxymethyltransferase~PRIAM: Glycine hydroxymethyltransferase~SPTR: C1XSL7 Serine hydroxymethyltransferase~PFAM: Serine hydroxymethyltransferase gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0130 Trad_0131 Trad_0131 Trad_0131 149277 149573 + hypothetical protein KEGG: rme:Rmet_1197 dihydrolipoamide acetyltransferase~SPTR: Q1LP43 Dihydrolipoamide acetyltransferase gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0131 Trad_0132 Trad_0132 Trad_0132 149906 153217 + alpha amylase catalytic region COGs: COG0366 Glycosidase~InterProIPR006047:IPR006046:IPR017853:IPR013784:IPR 006589:IPR013781~KEGG: dge:Dgeo_1746 alpha amylase%2C catalytic region~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: Q1IXJ3 Alpha amylase%2C catalytic region~PFAM: Alpha amylase%2C catalytic domain gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0132 Trad_0133 Trad_0133 Trad_0133 153273 154724 + cation transporter COGs: COG0168 Trk-type K+ transport systems membrane components~InterPro IPR003445~KEGG: ttj:TTHA1173 trk system potassium uptake protein (TrkG)~PFAM: cation transporter~SPTR: B7A9Q5 Cation transporter~PFAM: Cation transport protein~TIGRFAM: potassium uptake protein%2C TrkH family gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0133 Trad_0134 Trad_0134 Trad_0134 154824 155981 - diaminopimelate decarboxylase COGs: COG0019 Diaminopimelate decarboxylase~InterPro IPR002986:IPR000183:IPR009006~KEGG: dge:Dgeo_0790 diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~SPTR: Q1J092 Diaminopimelate decarboxylase~TIGRFAM: diaminopimelate decarboxylase~PFAM: Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain%3B Pyridoxal-dependent decarboxylase%2C pyridoxal binding domain~TIGRFAM: diaminopimelate decarboxylase gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0134 Trad_0135 Trad_0135 Trad_0135 156021 157358 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG0446 NAD(FAD)-dependent dehydrogenase~InterPro IPR013027:IPR004099:IPR016156:IPR016040~KEGG: ttj:TTHA1835 NADH oxidase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~SPTR: Q5SH95 NADH oxidase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0135 Trad_0136 Trad_0136 Trad_0136 157409 157915 + hypothetical protein KEGG: rrs:RoseRS_3476 anti-sigma-factor antagonist~SPTR: A5UYY1 Anti-sigma-factor antagonist gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0136 Trad_0137 Trad_0137 Trad_0137 158143 159510 + Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR015590:IPR016161:IPR016162:IPR016160~KEGG: rmr:Rmar_2008 aldehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: D0MKH7 Aldehyde Dehydrogenase~PFAM: Aldehyde dehydrogenase family gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0137 Trad_0138 Trad_0138 Trad_0138 159755 160504 + cyclase/dehydrase COGs: COG5637 integral membrane protein~InterPro IPR005031~KEGG: dra:DR_2377 hypothetical protein~PFAM: cyclase/dehydrase~SPTR: Q9RRV8 Putative uncharacterized protein~PFAM: Polyketide cyclase / dehydrase and lipid transport gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0138 Trad_0139 Trad_0139 Trad_0139 160579 163599 - transcription-repair coupling factor COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase)~InterProIPR014021:IPR001650:IPR004576:IPR003711:IPR 011545:IPR005118:IPR014001~KEGG: dra:DR_1532 transcription-repair coupling factor~PFAM: transcription factor CarD%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B TRCF domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: Q9RU62 Transcription-repair coupling factor~TIGRFAM: transcription-repair coupling factor~PFAM: Helicase conserved C-terminal domain%3B TRCF domain%3B CarD-like/TRCF domain%3B DEAD/DEAH box helicase~TIGRFAM: transcription-repair coupling factor (mfd) gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0139 Trad_0140 Trad_0140 Trad_0140 163723 164412 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 COGs: COG0546 phosphatase~InterPro IPR006402:IPR006439:IPR005834:IPR005833~KEGG: npu:Npun_F0767 HAD family hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: B4B5M9 HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED%3B haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0140 Trad_0141 Trad_0141 Trad_0141 164977 165804 - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase COGs: COG0313 methyltransferase~InterPro IPR008189:IPR000878:IPR014777~KEGG: dra:DR_0636 hypothetical protein~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~SPTR: Q9RWN0 Putative uncharacterized protein~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: conserved hypothetical protein TIGR00096 gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0141 Trad_0142 Trad_0142 Trad_0142 165818 166015 - conserved hypothetical protein KEGG: dge:Dgeo_1639 hypothetical protein~SPTR: Q1IXV0 Putative uncharacterized protein gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0142 Trad_0143 Trad_0143 Trad_0143 166002 166448 - conserved hypothetical protein KEGG: dge:Dgeo_1640 hypothetical protein~SPTR: Q1IXU9 Putative uncharacterized protein gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0143 Trad_0144 Trad_0144 Trad_0144 166609 166857 - conserved hypothetical protein KEGG: ddr:Deide_22810 hypothetical protein~SPTR: C1D044 Putative uncharacterized protein gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0144 Trad_0145 Trad_0145 Trad_0145 167118 168002 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR002347:IPR016040:IPR017441~KEGG: hau:Haur_0971 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C1XPG8 Putative uncharacterized protein~PFAM: short chain dehydrogenase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0145 Trad_0146 Trad_0146 Trad_0146 167999 169786 - hypothetical protein InterPro IPR001910~KEGG: pdi:BDI_1655 putative nucleoside hydrolase~SPTR: C4CYY6 Inosine-uridine nucleoside N-ribohydrolase~PFAM: Inosine-uridine preferring nucleoside hydrolase gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0146 Trad_0147 Trad_0147 Trad_0147 169996 172728 - aconitate hydratase 1 COGs: COG1048 Aconitase A~InterProIPR006249:IPR001030:IPR000573:IPR015928:IPR 015931:IPR015932:IPR018136~KEGG: ddr:Deide_07920 putative aconitate hydratase (citrate hydro-lyase) (aconitase)~PFAM: aconitate hydratase domain protein~SPTR: C1D1D2 Putative aconitate hydratase (Citrate hydro-lyase) (Aconitase)~TIGRFAM: aconitate hydratase 1~PFAM: Aconitase C-terminal domain%3B Aconitase family (aconitate hydratase)~TIGRFAM: aconitate hydratase 1 gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0147 Trad_0148 Trad_0148 Trad_0148 172929 173564 + conserved hypothetical protein InterPro IPR011991~KEGG: ddr:Deide_22910 hypothetical protein~SPTR: C1XNB4 Putative uncharacterized protein gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0148 Trad_0149 Trad_0149 Trad_0149 173641 174093 + hypothetical protein KEGG: chl:Chy400_2463 ABC-type sugar transport system periplasmic component-like protein~SPTR: A6NX25 Putative uncharacterized protein gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0149 Trad_0150 Trad_0150 Trad_0150 174418 174750 - thioredoxin COGs: COG3118 Thioredoxin domain-containing protein~InterProIPR017936:IPR005746:IPR013766:IPR006662:IPR 012336:IPR012335:IPR017937~KEGG: dge:Dgeo_1837 thioredoxin~PFAM: Thioredoxin domain~SPTR: Q1IXA2 Thioredoxin~TIGRFAM: thioredoxin~PFAM: Thioredoxin~TIGRFAM: thioredoxin gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0150 Trad_0151 Trad_0151 Trad_0151 174816 175952 - amidohydrolase COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase~InterPro IPR006680~KEGG: ttj:TTHA0872 amidohydrolase family protein~PFAM: amidohydrolase~SPTR: C1XT71 Cytosine deaminase-like metal-dependent hydrolase~PFAM: Amidohydrolase family gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0151 Trad_0152 Trad_0152 Trad_0152 175971 176240 - hypothetical protein KEGG: bha:BH0735 hypothetical protein~SPTR: Q9KEW4 BH0735 protein gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0152 Trad_0153 Trad_0153 Trad_0153 176261 176566 - hypothetical protein InterPro IPR001395~KEGG: bha:BH1011 oxidoreductase~SPTR: Q9KE47 Oxidoreductase gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0153 Trad_0154 Trad_0154 Trad_0154 176576 177142 - protein of unknown function DUF820 COGs: COG4636 conserved hypothetical protein~InterPro IPR008538:IPR012296~KEGG: ttj:TTHA1553 hypothetical protein~PFAM: protein of unknown function DUF820~SPTR: Q1NRE5 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF820) gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0154 Trad_0155 Trad_0155 Trad_0155 177158 178306 - Radical SAM domain protein COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR020050:IPR005244:IPR007197:IPR013785~KEGG: tth:TTC0727 biotin synthase/thiamine biosynthesis enzyme~PFAM: Radical SAM domain protein~SPTR: C1XJJ8 Putative uncharacterized protein~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM domain protein%2C CofH subfamily gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0155 Trad_0156 Trad_0156 Trad_0156 178693 180594 + extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: rlg:Rleg_6804 extracellular solute-binding protein family 5~PFAM: extracellular solute-binding protein family 5~SPTR: Q2CJJ0 Oligopeptide ABC transporter%2C periplasmic oligopeptide-binding protein~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0156 Trad_0157 Trad_0157 Trad_0157 180811 181815 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: rlt:Rleg2_5892 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q2CJI9 Oligopeptide ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0157 Trad_0158 Trad_0158 Trad_0158 181821 182681 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: rle:RL4415 putative transmembrane component of ABC transporter~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q2CJI8 Oligopeptide ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0158 Trad_0159 Trad_0159 Trad_0159 182683 183714 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterProIPR003439:IPR010066:IPR013563:IPR003593:IPR 017871~KEGG: rec:RHECIAT_PA0000147 probable oligopeptide ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: Q2CJI7 Oligopeptide ABC transporter%2C ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0159 Trad_0160 Trad_0160 Trad_0160 183711 184625 + ABC transporter related protein COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR003439:IPR003593:IPR017871~KEGG: rle:RL4413 putative ATP-binding component of ABC transporter~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q2CJI6 Oligopeptide ABC transporter%2C ATP-binding protein~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0160 Trad_0161 Trad_0161 Trad_0161 184660 186132 + alpha-L-arabinofuranosidase domain protein COGs: COG3534 Alpha-L-arabinofuranosidase~InterPro IPR010720:IPR017853~KEGG: rrs:RoseRS_3514 alpha-N-arabinofuranosidase~PFAM: alpha-L-arabinofuranosidase domain protein~SMART: alpha-L-arabinofuranosidase domain protein~SPTR: A5UZ19 Alpha-N-arabinofuranosidase~PFAM: Alpha-L-arabinofuranosidase C-terminus gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0161 Trad_0162 Trad_0162 Trad_0162 186223 187911 + L-ribulokinase COGs: COG1069 Ribulose kinase~InterPro IPR005929:IPR018484:IPR018485:IPR018483~KEGG: hau:Haur_3662 ribulokinase~PFAM: Carbohydrate kinase%2C FGGY-like~SPTR: A9B687 Ribulokinase~TIGRFAM: L-ribulokinase~PFAM: FGGY family of carbohydrate kinases%2C N-terminal domain%3B FGGY family of carbohydrate kinases%2C C-terminal domain~TIGRFAM: L-ribulokinase gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0162 Trad_0163 Trad_0163 Trad_0163 187908 188774 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509:IPR016040~KEGG: ttr:Tter_1321 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: D1CBR3 NAD-dependent epimerase/dehydratase~PFAM: NAD dependent epimerase/dehydratase family gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0163 Trad_0164 Trad_0164 Trad_0164 188774 189406 + GCN5-related N-acetyltransferase InterPro IPR000182:IPR016181~KEGG: dge:Dgeo_1160 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Q1IZ77 GCN5-related N-acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0164 Trad_0165 Trad_0165 Trad_0165 189497 191029 - phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent COGs: COG0696 Phosphoglyceromutase~InterProIPR005995:IPR011258:IPR006124:IPR017850:IPR 017849~KEGG: pth:PTH_2720 phosphoglyceromutase~PFAM: BPG-independent PGAM domain protein%3B metalloenzyme domain protein~PRIAM: Phosphoglycerate mutase~SPTR: B7DUE1 Phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~TIGRFAM: phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~PFAM: Metalloenzyme superfamily%3B BPG-independent PGAM N-terminus (iPGM_N)~TIGRFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0165 Trad_0166 Trad_0166 Trad_0166 191143 191640 - conserved hypothetical protein KEGG: xce:Xcel_1008 hypothetical protein~SPTR: D1BK51 Putative uncharacterized protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0166 Trad_0167 Trad_0167 Trad_0167 191706 192554 - protein of unknown function DUF721 InterPro IPR007922~KEGG: dge:Dgeo_1621 hypothetical protein~PFAM: protein of unknown function DUF721~SPTR: Q1IXW8 Zn-finger containing protein~PFAM: Protein of unknown function (DUF721) gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0167 Trad_0168 Trad_0168 Trad_0168 192567 193625 - DNA replication and repair protein RecF COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway)~InterPro IPR001238:IPR003395:IPR018078~KEGG: dge:Dgeo_1620 recombination protein F~PFAM: SMC domain protein~SPTR: Q1IXW9 DNA replication and repair protein recF~TIGRFAM: DNA replication and repair protein RecF~PFAM: RecF/RecN/SMC N terminal domain~TIGRFAM: recF protein gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0168 Trad_0169 Trad_0169 Trad_0169 193818 194051 + hypothetical protein KEGG: ana:alr3165 bacteriorhodopsin~SPTR: Q8YSC4 Bacteriorhodopsin gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0169 Trad_0170 Trad_0170 Trad_0170 194075 195274 + transposase%2C IS605 OrfB family COGs: COG0675 Transposase and inactivated derivatives~InterPro IPR010095:IPR001959:IPR007087~KEGG: cyc:PCC7424_1224 transposase%2C IS605 OrfB family~PFAM: putative transposase IS891/IS1136/IS1341 family%3B transposase IS605 OrfB~SPTR: B5W808 Transposase%2C IS605 OrfB family~TIGRFAM: transposase%2C IS605 OrfB family~PFAM: Putative transposase DNA-binding domain%3B Probable transposase~TIGRFAM: transposase%2C IS605 OrfB family%2C central region gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0170 Trad_0171 Trad_0171 Trad_0171 195277 195801 + rhodopsin COGs: COG5524 Bacteriorhodopsin~InterPro IPR001425:IPR018229~KEGG: cyc:PCC7424_3927 rhodopsin~PFAM: rhodopsin~SPTR: B7KKH0 Rhodopsin~PFAM: Bacteriorhodopsin-like protein gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0171 Trad_0172 Trad_0172 Trad_0172 196095 196941 + pseudogene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0172 Trad_0173 Trad_0173 Trad_0173 197059 197430 - holo-acyl-carrier-protein synthase COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)~InterPro IPR002582:IPR004568:IPR008278~KEGG: dge:Dgeo_1927 phosphopantethiene-protein transferase domain-contain protein~PFAM: 4'-phosphopantetheinyl transferase~SPTR: C1XXM0 Phosphopantethiene--protein transferase~TIGRFAM: holo-acyl-carrier-protein synthase~PFAM: 4'-phosphopantetheinyl transferase superfamily~TIGRFAM: phosphopantethiene--protein transferase domain%3B holo-[acyl-carrier-protein] synthase gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0173 Trad_0174 Trad_0174 Trad_0174 197439 198122 - ribose 5-phosphate isomerase COGs: COG0120 Ribose 5-phosphate isomerase~InterPro IPR004788~KEGG: rca:Rcas_2980 ribose-5-phosphate isomerase A~PFAM: Ribose 5-phosphate isomerase~PRIAM: Ribose-5-phosphate isomerase~SPTR: C1XT84 Ribose-5-phosphate isomerase~TIGRFAM: ribose 5-phosphate isomerase~manually curated~PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A)~TIGRFAM: ribose 5-phosphate isomerase gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0174 Trad_0175 Trad_0175 Trad_0175 198258 198731 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG1225 Peroxiredoxin~InterPro IPR017936:IPR000866:IPR012336:IPR012335~KEGG: ttj:TTHA1300 bacterioferritin comigratory protein%2C thiol peroxidase%2C putative~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Q5SIR4 Bacterioferritin comigratory protein%2C thiol peroxidase%2C putative~PFAM: AhpC/TSA family gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0175 Trad_0176 Trad_0176 Trad_0176 198828 201416 + ATP-dependent chaperone ClpB COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterProIPR017730:IPR004176:IPR003959:IPR013093:IPR 019489:IPR001270:IPR003593:IPR018368~KEGG: ttj:TTHA1487 ATP-dependent Clp protease%2C ATP-binding subunit ClpB~PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B Clp domain protein%3B Clp ATPase-like~SMART: AAA ATPase~SPTR: C1XQZ8 ATP-dependent chaperone ClpB~TIGRFAM: ATP-dependent chaperone ClpB~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B Clp amino terminal domain%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent chaperone ClpB gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0176 Trad_0177 Trad_0177 Trad_0177 201501 203174 - Glycerol-3-phosphate dehydrogenase COGs: COG0578 Glycerol-3-phosphate dehydrogenase~InterPro IPR006076:IPR000447~KEGG: bid:Bind_0378 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase~PRIAM: Glycerol-3-phosphate dehydrogenase~SPTR: C1XTT3 Glycerol-3-phosphate dehydrogenase~PFAM: FAD dependent oxidoreductase gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0177 Trad_0178 Trad_0178 Trad_0178 203533 204306 + Electron transfer flavoprotein alpha/beta-subunit COGs: COG2086 Electron transfer flavoprotein beta subunit~InterPro IPR012255:IPR014730:IPR014729~KEGG: dge:Dgeo_0719 electron transfer flavoprotein beta-subunit~PFAM: Electron transfer flavoprotein alpha/beta-subunit~SPTR: Q1J0G3 Electron transfer flavoprotein beta-subunit~PFAM: Electron transfer flavoprotein domain gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0178 Trad_0179 Trad_0179 Trad_0179 204303 205256 + Electron transfer flavoprotein alpha subunit COGs: COG2025 Electron transfer flavoprotein alpha subunit~InterPro IPR001308:IPR014730:IPR014731:IPR014729~KEGG: dge:Dgeo_0720 electron transfer flavoprotein%2C alpha subunit~PFAM: Electron transfer flavoprotein alpha subunit %3B Electron transfer flavoprotein alpha/beta-subunit~SPTR: Q1J0G2 Electron transfer flavoprotein%2C alpha subunit~PFAM: Electron transfer flavoprotein domain%3B Electron transfer flavoprotein FAD-binding domain gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0179 Trad_0180 Trad_0180 Trad_0180 205280 207874 + protein of unknown function DUF224 cysteine-rich region domain protein COGs: COG0247 Fe-S oxidoreductase~InterProIPR017896:IPR004017:IPR009051:IPR012285:IPR 017900~KEGG: dge:Dgeo_0874 protein of unknown function DUF224%2C cysteine-rich region~PFAM: protein of unknown function DUF224 cysteine-rich region domain protein~SPTR: Q1J008 Fe-S oxidoreductase subunit (Cysteine-rich domain domain enzyme)~PFAM: Cysteine-rich domain gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0180 Trad_0181 Trad_0181 Trad_0181 207887 209410 + glycoside hydrolase family 3 domain protein COGs: COG1472 Beta-glucosidase-related glycosidase~InterPro IPR001764:IPR017853:IPR019800~KEGG: cvi:CV_0259 glycosy hydrolase family protein~PFAM: glycoside hydrolase family 3 domain protein~SPTR: C1XRD5 Beta-glucosidase-like glycosyl hydrolase~PFAM: Glycosyl hydrolase family 3 N terminal domain gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0181 Trad_0182 Trad_0182 Trad_0182 209524 210975 + protein of unknown function DUF187 COGs: COG1649 conserved hypothetical protein~InterPro IPR003790~KEGG: ddr:Deide_2p00260 conserved hypothetical protein%2C precursor~PFAM: protein of unknown function DUF187~SPTR: C1D2P2 Putative uncharacterized protein~PFAM: Uncharacterised BCR%2C COG1649 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0182 Trad_0183 Trad_0183 Trad_0183 210972 211946 + mannose-6-phosphate isomerase%2C class I COGs: COG1482 Phosphomannose isomerase~InterPro IPR001250:IPR014628:IPR011051:IPR014710~KEGG: rca:Rcas_1081 mannose-6-phosphate isomerase~PFAM: mannose-6-phosphate isomerase type I~PRIAM: Mannose-6-phosphate isomerase~SPTR: A7NI81 Mannose-6-phosphate isomerase~TIGRFAM: mannose-6-phosphate isomerase%2C class I~PFAM: Phosphomannose isomerase type I~TIGRFAM: mannose-6-phosphate isomerase%2C class I gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0183 Trad_0184 Trad_0184 Trad_0184 211900 212406 - Peroxiredoxin COGs: COG1225 Peroxiredoxin~InterPro IPR017936:IPR000866:IPR012336:IPR012335~KEGG: scl:sce4618 peroxiredoxin~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~PRIAM: Peroxiredoxin~SPTR: A9F9N6 Peroxiredoxin (AhpC/TSA family)~PFAM: AhpC/TSA family gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0184 Trad_0185 Trad_0185 Trad_0185 212531 213178 - dienelactone hydrolase COGs: COG4099 peptidase~InterPro IPR002925~KEGG: npu:Npun_F5261 dienelactone hydrolase~PFAM: dienelactone hydrolase~SPTR: B2J3D7 Dienelactone hydrolase~manually curated~PFAM: Dienelactone hydrolase family gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0185 Trad_0186 Trad_0186 Trad_0186 213259 215052 + ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR003439:IPR017940:IPR001140:IPR011527:IPR 003593:IPR017871~KEGG: sru:SRU_2284 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: Q2S093 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0186 Trad_0187 Trad_0187 Trad_0187 215049 215453 - conserved hypothetical protein KEGG: geo:Geob_2748 hypothetical protein~SPTR: B9M1L5 Putative uncharacterized protein gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0187 Trad_0188 Trad_0188 Trad_0188 215510 216262 + alpha/beta hydrolase fold protein InterPro IPR000073:IPR019793~KEGG: dra:DR_1326 carboxymethylenebutenolidase-related protein~PFAM: alpha/beta hydrolase fold~SPTR: Q9RUQ6 Carboxymethylenebutenolidase-related protein~PFAM: alpha/beta hydrolase fold gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0188 Trad_0189 Trad_0189 Trad_0189 216304 216978 + isochorismatase hydrolase COGs: COG1335 Amidase related to nicotinamidase~InterPro IPR000868~KEGG: dge:Dgeo_0227 isochorismatase hydrolase~PFAM: isochorismatase hydrolase~SPTR: Q1J1V4 Isochorismatase hydrolase~PFAM: Isochorismatase family gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0189 Trad_0190 Trad_0190 Trad_0190 217143 218909 + TrkA-C domain protein COGs: COG0471 Di- and tricarboxylate transporter~InterPro IPR006037:IPR004680:IPR016040:IPR001898~KEGG: noc:Noc_1175 TrkA-C%2C di- and tricarboxylate transporters~PFAM: TrkA-C domain protein%3B Citrate transporter~SPTR: Q3JBW8 TrkA-C%2C di-and tricarboxylate transporters~PFAM: TrkA-C domain%3B Citrate transporter gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0190 Trad_0191 Trad_0191 Trad_0191 218978 219484 - putative 4-alpha-glucanotransferase KEGG: sgr:SGR_4879 putative 4-alpha-glucanotransferase~SPTR: C1RN13 Uncharacterized conserved protein gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0191 Trad_0192 Trad_0192 Trad_0192 219569 221962 - ATP-dependent protease La COGs: COG0466 ATP-dependent Lon protease~InterProIPR004815:IPR003111:IPR003959:IPR008269:IPR 001984:IPR020568:IPR003593:IPR008268~KEGG: dra:DR_1974 ATP-dependent protease La~PFAM: AAA ATPase central domain protein%3B peptidase S16 lon domain protein~PRIAM: Endopeptidase La~SMART: peptidase S16 lon domain protein%3B AAA ATPase~SPTR: Q9RSZ5 ATP-dependent protease La~TIGRFAM: ATP-dependent protease La~PFAM: ATP-dependent protease La (LON) domain%3B ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: ATP-dependent protease La gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0192 Trad_0193 Trad_0193 Trad_0193 222104 222367 - hypothetical protein KEGG: ddr:Deide_07260 putative ABC transporter%2C ATP-binding component~SPTR: C1D160 Putative ABC transporter%2C ATP-binding component gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0193 Trad_0194 Trad_0194 Trad_0194 222710 223774 + Extracellular solute-binding protein%2C family 7 COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component~InterPro IPR018389~KEGG: dat:HRM2_13970 periplasmic TRAP-type dicarboxylate transporter protein~PFAM: Extracellular solute-binding protein%2C family 7~SPTR: C0Q9E2 Periplasmic TRAP-type dicarboxylate transporter protein~PFAM: Bacterial extracellular solute-binding protein%2C family 7 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0194 Trad_0195 Trad_0195 Trad_0195 223861 224427 + Tripartite ATP-independent periplasmic transporter DctQ component COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component~InterPro IPR007387~KEGG: dat:HRM2_13980 hypothetical protein~PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~SPTR: C0Q9E3 Putative uncharacterized protein~PFAM: Tripartite ATP-independent periplasmic transporters%2C DctQ component gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0195 Trad_0196 Trad_0196 Trad_0196 224435 225760 + TRAP dicarboxylate transporter%2C DctM subunit COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component~InterPro IPR004681:IPR010656:IPR001991~KEGG: dat:HRM2_13990 hypothetical protein~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit~SPTR: C0Q9E4 Putative uncharacterized protein~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: DctM-like transporters~TIGRFAM: TRAP transporter%2C DctM subunit gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0196 Trad_0197 Trad_0197 Trad_0197 225835 226592 - pseudogene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0197 Trad_0198 Trad_0198 Trad_0198 226501 227283 - hypothetical protein KEGG: ccs:CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase~SPTR: C1XVC1 Putative uncharacterized protein gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0198 Trad_0199 Trad_0199 Trad_0199 227347 227970 + short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR002198:IPR002347:IPR016040~KEGG: ttj:TTHB094 putative short-chain oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C1XIG3 Putative uncharacterized protein~PFAM: short chain dehydrogenase gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0199 Trad_0200 Trad_0200 Trad_0200 227967 228872 - beta-lactamase domain-containing protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~InterPro IPR001018~KEGG: rca:Rcas_3009 beta-lactamase domain-containing protein~SPTR: A7NND3 Beta-lactamase domain protein~PFAM: Metallo-beta-lactamase superfamily gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0200 Trad_0201 Trad_0201 Trad_0201 228956 230221 - Fmu (Sun) domain protein COGs: COG0144 tRNA and rRNA cytosine-C5-methylase~InterPro IPR006027:IPR001678~KEGG: dge:Dgeo_1498 NusB/RsmB/TIM44~PFAM: Fmu (Sun) domain protein%3B NusB/RsmB/TIM44~SPTR: Q1IY91 rRNA methyltransferase%2C sun family protein~PFAM: NOL1/NOP2/sun family%3B NusB family~TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0201 Trad_0202 Trad_0202 Trad_0202 230299 230991 - peptidase membrane zinc metallopeptidase putative COGs: COG2738 Zn-dependent protease~InterPro IPR007395~KEGG: tth:TTC0540 hypothetical protein~PFAM: peptidase membrane zinc metallopeptidase putative~SPTR: C1XJI3 Predicted Zn-dependent protease~PFAM: Putative neutral zinc metallopeptidase gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0202 Trad_0203 Trad_0203 Trad_0203 231221 231508 - Stage V sporulation protein S COGs: COG2359 conserved hypothetical protein~InterPro IPR007347~KEGG: ttj:TTHA0850 stage V sporulation protein S (SpoVS) related protein~PFAM: Stage V sporulation protein S~SPTR: Q72KE7 Stage V sporulation protein S~manually curated~PFAM: Stage V sporulation protein S (SpoVS) gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0203 Trad_0204 Trad_0204 Trad_0204 231967 233742 + acetolactate synthase%2C large subunit%2C biosynthetic type COGs: COG0028 Thiamine pyrophosphate-requiring protein~InterProIPR012846:IPR012001:IPR012000:IPR011766:IPR 000399~KEGG: ttj:TTHA1213 acetolactate synthase%2C large subunit~PFAM: thiamine pyrophosphate protein TPP binding domain protein%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein domain protein TPP-binding~SPTR: Q5SJ01 Acetolactate synthase~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0204 Trad_0205 Trad_0205 Trad_0205 233739 234269 + acetolactate synthase%2C small subunit COGs: COG0440 Acetolactate synthase small (regulatory) subunit~InterPro IPR004789:IPR002912:IPR019455~KEGG: dge:Dgeo_0601 acetolactate synthase%2C small subunit~PFAM: Acetolactate synthase%2C small subunit-like%3B amino acid-binding ACT domain protein~SPTR: Q1J0T1 Acetolactate synthase%2C small subunit~TIGRFAM: acetolactate synthase%2C small subunit~PFAM: ACT domain%3B Small subunit of acetolactate synthase~TIGRFAM: acetolactate synthase%2C small subunit gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0205 Trad_0206 Trad_0206 Trad_0206 234302 235300 + ketol-acid reductoisomerase COGs: COG0059 Ketol-acid reductoisomerase~InterProIPR013023:IPR013116:IPR000506:IPR008927:IPR 016040~KEGG: cya:CYA_0246 ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein%3B acetohydroxy acid isomeroreductase~PRIAM: Ketol-acid reductoisomerase~SPTR: Q2JXL2 Ketol-acid reductoisomerase~TIGRFAM: ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase%2C catalytic domain~TIGRFAM: ketol-acid reductoisomerase gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0206 Trad_0207 Trad_0207 Trad_0207 235467 237005 + 2-isopropylmalate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterProIPR000891:IPR005671:IPR013709:IPR013785:IPR 002034~KEGG: dra:DR_1482 2-isopropylmalate synthase~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerisation) domain~SPTR: C1XQF8 2-isopropylmalate synthase~TIGRFAM: 2-isopropylmalate synthase~PFAM: LeuA allosteric (dimerisation) domain%3B HMGL-like~TIGRFAM: 2-isopropylmalate synthase%2C bacterial type gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0207 Trad_0208 Trad_0208 Trad_0208 237019 238641 + 2-isopropylmalate synthase/homocitrate synthase family protein COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterProIPR000891:IPR005675:IPR013709:IPR013785:IPR 002034~KEGG: tth:TTC0847 putative alpha-isopropylmalate/homocitrate synthase family transferase~PFAM: LeuA allosteric (dimerisation) domain%3B pyruvate carboxyltransferase~SPTR: Q72JD1 2-isopropylmalate synthase~TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein~PFAM: LeuA allosteric (dimerisation) domain%3B HMGL-like~TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0208 Trad_0209 Trad_0209 Trad_0209 238958 243511 + Glutamate synthase (ferredoxin) COGs: COG0069 Glutamate synthase domain 2~InterProIPR017932:IPR000583:IPR006982:IPR002932:IPR 002489:IPR013785~KEGG: chl:Chy400_3517 glutamate synthase (ferredoxin)~PFAM: ferredoxin-dependent glutamate synthase%3B glutamine amidotransferase class-II%3B glutamate synthase%3B glutamate synthase alpha subunit domain protein~PRIAM: Glutamate synthase (ferredoxin)~SPTR: B9LCZ9 Glutamate synthase (Ferredoxin)~PFAM: Conserved region in glutamate synthase%3B GXGXG motif%3B Glutamate synthase central domain%3B Glutamine amidotransferases class-II gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0209 Trad_0210 Trad_0210 Trad_0210 244869 245891 - Transketolase central region COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit~InterPro IPR005475:IPR005476:IPR009014:IPR015941~KEGG: ttj:TTHA0938 pyruvate dehydrogenase E1 component%2C beta subunit~PFAM: Transketolase central region%3B Transketolase domain protein~SPTR: C1XT03 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dehydrogenase component beta subunit~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0210 Trad_0211 Trad_0211 Trad_0211 245878 246921 - pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit~InterPro IPR017596:IPR001017~KEGG: tth:TTC0569 pyruvate decarboxylase alpha subunit-like protein~PFAM: dehydrogenase E1 component~PRIAM: Pyruvate dehydrogenase (acetyl-transferring)~SPTR: C1XT02 Pyruvate dehydrogenase E1 component%2C alpha subunit~TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit~PFAM: Dehydrogenase E1 component~TIGRFAM: pyruvate dehydrogenase E1 component%2C alpha subunit gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0211 Trad_0212 Trad_0212 Trad_0212 247231 248259 + Alcohol dehydrogenase zinc-binding domain protein COGs: COG1064 Zn-dependent alcohol dehydrogenase~InterProIPR013154:IPR013149:IPR011032:IPR016040:IPR 002328~KEGG: ddr:Deide_03550 putative alcohol dehydrogenase%2C (ADH)~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~SPTR: C1CZS5 Putative Alcohol dehydrogenase%2C (ADH)~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0212 Trad_0213 Trad_0213 Trad_0213 248313 248840 - hypothetical protein KEGG: sed:SeD_A1227 VasA~SPTR: C2PG08 Glycosyltransferase gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0213 Trad_0214 Trad_0214 Trad_0214 248981 249340 - Excinuclease ABC C subunit domain protein InterPro IPR000305~KEGG: tle:Tlet_1191 excinuclease ABC subunit C~PFAM: Excinuclease ABC C subunit domain protein~SPTR: C6I101 Putative uncharacterized protein~PFAM: GIY-YIG catalytic domain gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0214 Trad_0215 Trad_0215 Trad_0215 249342 250316 - GTP-binding protein Era COGs: COG1159 GTPase~InterProIPR004044:IPR005225:IPR005662:IPR002917:IPR 006073:IPR009019:IPR015946~KEGG: dge:Dgeo_1825 GTP-binding protein Era~PFAM: GTP-binding protein HSR1-related%3B KH type 2 domain protein~SPTR: Q1IXB4 GTP-binding protein era homolog~TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein~PFAM: KH domain%3B GTPase of unknown function~TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein domain gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0215 Trad_0216 Trad_0216 Trad_0216 250498 251028 - transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR000792:IPR016032:IPR011991~KEGG: sgr:SGR_4042 putative two-component system response regulator~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~SPTR: B4CWX5 Two component transcriptional regulator%2C LuxR family~PFAM: Bacterial regulatory proteins%2C luxR family gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0216 Trad_0217 Trad_0217 Trad_0217 251550 254480 + PKD domain containing protein COGs: COG2133 Glucose/sorbosone dehydrogenase~InterPro IPR000601:IPR011041:IPR011042~KEGG: gvi:gll0556 hypothetical protein~PFAM: PKD domain containing protein~SMART: PKD domain containing protein~SPTR: Q7NN58 Gll0556 protein~PFAM: Glucose / Sorbosone dehydrogenase%3B PKD domain gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0217 Trad_0218 Trad_0218 Trad_0218 254534 255631 - ferrochelatase COGs: COG0276 Protoheme ferro-lyase (ferrochelatase)~InterPro IPR001015:IPR019772~KEGG: gau:GAU_2783 ferrochelatase~PFAM: ferrochelatase~PRIAM: Ferrochelatase~SPTR: C1AAM7 Ferrochelatase~TIGRFAM: ferrochelatase~PFAM: Ferrochelatase~TIGRFAM: ferrochelatase gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0218 Trad_0219 Trad_0219 Trad_0219 255785 256687 - Catalase COGs: COG3546 Mn-containing catalase~InterPro IPR007760:IPR009078:IPR012347~KEGG: tro:trd_0854 probable manganese catalase~PFAM: manganese containing catalase~PRIAM: Catalase~SPTR: B9KZE0 Probable manganese catalase~PFAM: Manganese containing catalase gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0219 Trad_0220 Trad_0220 Trad_0220 256803 257717 + transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847:IPR005119:IPR011991~KEGG: sru:SRU_2406 redox-sensitive transcriptional activator OxyR~PFAM: LysR substrate-binding%3B regulatory protein LysR~SPTR: Q2RZX6 Redox-sensitive transcriptional activator OxyR~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0220 Trad_0221 Trad_0221 Trad_0221 257781 258773 - Coproporphyrinogen oxidase COGs: COG0408 Coproporphyrinogen III oxidase~InterPro IPR001260:IPR018375~KEGG: cag:Cagg_1294 coproporphyrinogen oxidase~PFAM: coproporphyrinogen III oxidase~PRIAM: Coproporphyrinogen oxidase~SPTR: B8G823 Coproporphyrinogen oxidase~PFAM: Coproporphyrinogen III oxidase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0221 Trad_0222 Trad_0222 Trad_0222 258766 259806 - uroporphyrinogen decarboxylase COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR006361:IPR000257~KEGG: gme:Gmet_0016 uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D)~PRIAM: Uroporphyrinogen decarboxylase~SPTR: C1XF70 Uroporphyrinogen decarboxylase~TIGRFAM: uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: uroporphyrinogen decarboxylase gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0222 Trad_0223 Trad_0223 Trad_0223 260004 260765 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterProIPR001789:IPR001867:IPR011006:IPR016032:IPR 011991~KEGG: gme:Gmet_1291 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: C1XV31 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0223 Trad_0224 Trad_0224 Trad_0224 260762 261934 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR005467:IPR003661:IPR003594:IPR004358:IPR 009082~KEGG: dal:Dalk_0313 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SPTR: C1XF72 Sensor protein~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0224 Trad_0225 Trad_0225 Trad_0225 261979 263067 - Porphobilinogen synthase COGs: COG0113 Delta-aminolevulinic acid dehydratase~InterPro IPR001731:IPR013785~KEGG: scl:sce0016 delta-aminolevulinic acid dehydratase~PFAM: delta-aminolevulinic acid dehydratase~PRIAM: Porphobilinogen synthase~SPTR: C1XV33 Delta-aminolevulinic acid dehydratase~PFAM: Delta-aminolevulinic acid dehydratase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0225 Trad_0226 Trad_0226 Trad_0226 263064 263798 - Uroporphyrinogen III synthase HEM4 COGs: COG1587 Uroporphyrinogen-III synthase~InterPro IPR003754~KEGG: rrs:RoseRS_1751 uroporphyrinogen III synthase HEM4~PFAM: Uroporphyrinogen III synthase HEM4~SPTR: C1XV34 Uroporphyrinogen-III synthase~PFAM: Uroporphyrinogen-III synthase HemD gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0226 Trad_0227 Trad_0227 Trad_0227 263798 264760 - porphobilinogen deaminase COGs: COG0181 Porphobilinogen deaminase~InterPro IPR000860~KEGG: phe:Phep_3450 porphobilinogen deaminase~PFAM: Porphobilinogen deaminase~SPTR: C1XF75 Porphobilinogen deaminase~TIGRFAM: porphobilinogen deaminase~PFAM: Porphobilinogen deaminase%2C C-terminal domain%3B Porphobilinogen deaminase%2C dipyromethane cofactor binding domain~TIGRFAM: porphobilinogen deaminase gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0227 Trad_0228 Trad_0228 Trad_0228 264753 265964 - Glutamyl-tRNA reductase COGs: COG0373 Glutamyl-tRNA reductase~InterPro IPR015895:IPR006151:IPR016040~KEGG: sti:Sthe_1800 glutamyl-tRNA reductase~PFAM: Shikimate/quinate 5-dehydrogenase%3B Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase-like~PRIAM: Glutamyl-tRNA reductase~SPTR: C1XV36 Glutamyl-tRNA reductase~PFAM: Shikimate / quinate 5-dehydrogenase%3B Glutamyl-tRNAGlu reductase%2C N-terminal domain~TIGRFAM: glutamyl-tRNA reductase gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0228 Trad_0229 Trad_0229 Trad_0229 266226 266528 - transcriptional regulator%2C LysR family KEGG: vap:Vapar_4473 transcriptional regulator%2C LysR family~SPTR: C5CK33 Transcriptional regulator%2C LysR family gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0229 Trad_0230 Trad_0230 Trad_0230 266638 268155 - major facilitator superfamily MFS_1 InterPro IPR011701:IPR016196~KEGG: mxa:MXAN_3677 major facilitator family transporter~PFAM: major facilitator superfamily MFS_1~SPTR: C1XFT0 Arabinose efflux permease family protein~PFAM: Major Facilitator Superfamily gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0230 Trad_0231 Trad_0231 Trad_0231 268329 269027 + phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase~InterPro IPR006063:IPR006062:IPR011060:IPR013785~KEGG: ddr:Deide_20190 putative 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imid azole-4-carboxamide isomerase~PFAM: histidine biosynthesis protein~PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase~SPTR: C1XP87 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase~TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase~PFAM: Histidine biosynthesis protein~TIGRFAM: hisA/hisF family protein%3B phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0231 Trad_0232 Trad_0232 Trad_0232 269038 269841 + formamidopyrimidine-DNA glycosylase COGs: COG0266 Formamidopyrimidine-DNA glycosylase~InterProIPR000214:IPR012319:IPR000191:IPR015886:IPR 010663:IPR010979:IPR015887~KEGG: dra:DR_0493 formamidopyrimidine-DNA glycosylase~PFAM: DNA glycosylase/AP lyase%2C H2TH DNA-binding%3B Formamidopyrimidine-DNA glycosylase catalytic domain protein%3B zinc finger Fpg domain protein~PRIAM: DNA-formamidopyrimidine glycosylase~SPTR: Q9RX22 Formamidopyrimidine-DNA glycosylase~TIGRFAM: formamidopyrimidine-DNA glycosylase~PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain%3B Formamidopyrimidine-DNA glycosylase N-terminal domain%3B Zinc finger found in FPG and IleRS~TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0232 Trad_0233 Trad_0233 Trad_0233 269887 270273 + thioesterase superfamily protein COGs: COG0824 thioesterase~InterPro IPR006683~KEGG: rpi:Rpic_3629 thioesterase superfamily protein~PFAM: thioesterase superfamily protein~SPTR: B2U748 Thioesterase superfamily protein~PFAM: Thioesterase superfamily~TIGRFAM: conserved hypothetical protein TIGR00051 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0233 Trad_0234 Trad_0234 Trad_0234 270513 270914 + thioesterase superfamily protein COGs: COG0824 thioesterase~InterPro IPR006683~KEGG: sde:Sde_1856 hypothetical protein~PFAM: thioesterase superfamily protein~SPTR: Q21JL3 Thioesterase superfamily~PFAM: Thioesterase superfamily~TIGRFAM: conserved hypothetical protein TIGR00051 gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0234 Trad_0235 Trad_0235 Trad_0235 270898 271458 - 5-formyltetrahydrofolate cyclo-ligase COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase~InterPro IPR002698~KEGG: ttj:TTHA1611 5-formyltetrahydrofolate cyclo-ligase family protein~PFAM: 5-formyltetrahydrofolate cyclo-ligase~SPTR: C1XHH6 5-formyltetrahydrofolate cyclo-ligase~TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase family~TIGRFAM: 5%2C10-methenyltetrahydrofolate synthetase gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0235 Trad_0236 Trad_0236 Trad_0236 271559 271990 + OsmC family protein COGs: COG1765 redox protein regulator of disulfide bond formation~InterPro IPR003718:IPR015946~KEGG: ttj:TTHA1373 hypothetical protein~PFAM: OsmC family protein~SPTR: Q72IX4 Putative uncharacterized protein~PFAM: OsmC-like protein gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0236 Trad_0237 Trad_0237 Trad_0237 272124 274211 + Polyphosphate kinase COGs: COG0855 Polyphosphate kinase~InterPro IPR003414~KEGG: rrs:RoseRS_3717 polyphosphate kinase~PFAM: Polyphosphate kinase~PRIAM: Polyphosphate kinase~SPTR: A5UZL8 Polyphosphate kinase~PFAM: Polyphosphate kinase gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0237 Trad_0238 Trad_0238 Trad_0238 274208 274459 - conserved hypothetical protein KEGG: dge:Dgeo_0322 hypothetical protein~SPTR: Q1J1K9 Putative uncharacterized protein gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0238 Trad_0239 Trad_0239 Trad_0239 274456 274881 - methylglyoxal synthase COGs: COG1803 Methylglyoxal synthase~InterPro IPR004363:IPR011607~KEGG: dge:Dgeo_0241 methylglyoxal synthase~PFAM: MGS domain protein~PRIAM: Methylglyoxal synthase~SPTR: C1XHI8 Methylglyoxal synthase~TIGRFAM: methylglyoxal synthase~PFAM: MGS-like domain~TIGRFAM: methylglyoxal synthase gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0239 Trad_0240 Trad_0240 Trad_0240 278608 280206 + apolipoprotein N-acyltransferase COGs: COG0815 Apolipoprotein N-acyltransferase~InterPro IPR003010:IPR004563~KEGG: ttj:TTHA0484 apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~SPTR: C1XLY3 Apolipoprotein N-acyltransferase~TIGRFAM: apolipoprotein N-acyltransferase~PFAM: Carbon-nitrogen hydrolase~TIGRFAM: apolipoprotein N-acyltransferase gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0240 Trad_0241 Trad_0241 Trad_0241 280250 280921 - TrkA-N domain protein COGs: COG0569 K+ transport systems NAD-binding component~InterPro IPR003148:IPR006037:IPR016040~KEGG: dge:Dgeo_1584 TrkA-N~PFAM: TrkA-N domain protein%3B TrkA-C domain protein~SPTR: Q1IY05 K+ transport system%2C NAD-binding component~PFAM: TrkA-N domain%3B TrkA-C domain gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0241 Trad_0242 Trad_0242 Trad_0242 280997 282355 - potassium uptake protein%2C TrkH family COGs: COG0168 Trk-type K+ transport systems membrane components~InterPro IPR004772:IPR003445~KEGG: dge:Dgeo_1583 K+ transporter trk~PFAM: cation transporter~PRIAM: H(+)-transporting two-sector ATPase~SPTR: Q1IY06 K+ transporter Trk~TIGRFAM: potassium uptake protein%2C TrkH family~PFAM: Cation transport protein~TIGRFAM: potassium uptake protein%2C TrkH family gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0242 Trad_0243 Trad_0243 Trad_0243 282573 283340 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR002347:IPR016040~KEGG: hma:rrnAC3004 3-ketoacyl-(acyl-carrier-protein) reductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C0G1P3 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0243 Trad_0244 Trad_0244 Trad_0244 283475 284830 + TrkA-N domain protein COGs: COG0569 K+ transport systems NAD-binding component~InterPro IPR003148:IPR006037:IPR006036:IPR016040~KEGG: ttj:TTHA1174 potassium transporter peripheral membrane component~PFAM: TrkA-N domain protein%3B TrkA-C domain protein~SPTR: C1XSR7 K+ transport system%2C NAD-binding component~PFAM: TrkA-N domain%3B TrkA-C domain gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0244 Trad_0245 Trad_0245 Trad_0245 284849 286315 + cation transporter COGs: COG0168 Trk-type K+ transport systems membrane components~InterPro IPR003445~KEGG: ttj:TTHA1173 trk system potassium uptake protein (TrkG)~PFAM: cation transporter~SPTR: B7A9Q5 Cation transporter~PFAM: Cation transport protein~TIGRFAM: potassium uptake protein%2C TrkH family gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0245 Trad_0246 Trad_0246 Trad_0246 286372 288231 + putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains~InterProIPR000595:IPR000644:IPR005105:IPR018821:IPR 018490:IPR014710:IPR013785~KEGG: mgm:Mmc1_1043 cyclic nucleotide-binding protein~PFAM: protein of unknown function DUF294 nucleotidyltransferase putative%3B CBS domain containing protein%3B cyclic nucleotide-binding%3B Domain of unknown function DUF294%2C putative nucleotidyltransferase substrate-binding~SMART: cyclic nucleotide-binding%3B CBS domain containing protein~SPTR: C5SA68 Cyclic nucleotide-binding protein~PFAM: Putative nucleotidyltransferase substrate binding domain%3B CBS domain%3B Cyclic nucleotide-binding domain%3B Putative nucleotidyltransferase DUF294 gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0246 Trad_0247 Trad_0247 Trad_0247 288241 288915 + Exonuclease RNase T and DNA polymerase III COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease~InterPro IPR013520:IPR012337:IPR006055~KEGG: cef:CE1385 putative DNA polymerase III epsilon subunit~PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~SPTR: C5SA67 Exonuclease RNase T and DNA polymerase III~PFAM: Exonuclease gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0247 Trad_0248 Trad_0248 Trad_0248 288989 291532 - peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209:IPR003137:IPR010435~KEGG: scl:sce3689 subtilisin like protease~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B protease-associated PA domain protein%3B protein of unknown function DUF1034~SPTR: C1YHR1 Subtilisin-like serine protease~PFAM: PA domain%3B Fn3-like domain (DUF1034)%3B Peptidase inhibitor I9%3B Subtilase family gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0248 Trad_0249 Trad_0249 Trad_0249 291891 292769 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: dra:DR_2393 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: C1XGC7 Predicted permease%2C DMT superfamily~PFAM: EamA-like transporter family gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0249 Trad_0250 Trad_0250 Trad_0250 292766 293422 - MOSC domain containing protein COGs: COG2258 conserved hypothetical protein~InterPro IPR005302:IPR011037:IPR015808~KEGG: dra:DR_1051 hypothetical protein~PFAM: MOSC domain containing protein~SPTR: C1XRA3 Uncharacterized conserved protein~PFAM: MOSC domain gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0250 Trad_0251 Trad_0251 Trad_0251 293689 294282 - hypothetical protein KEGG: cbb:CLD_2728 mannitol operon repressor~SPTR: B1IMR2 Probable mannitol operon repressor~manually curated~PFAM: Mannitol repressor gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0251 Trad_0252 Trad_0252 Trad_0252 294346 296295 - acetate/CoA ligase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR011904:IPR000873:IPR020845~KEGG: ttj:TTHA1248 acetyl-coenzyme A synthetase~PFAM: AMP-dependent synthetase and ligase~SPTR: C1XFH2 Acetyl-coenzyme A synthetase~TIGRFAM: acetate/CoA ligase~PFAM: Domain of unknown function (DUF3448)%3B AMP-binding enzyme~TIGRFAM: acetate--CoA ligase gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0252 Trad_0253 Trad_0253 Trad_0253 296741 298630 + AMP-dependent synthetase and ligase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR000873:IPR020845~KEGG: tth:TTC0886 acetyl-coenzyme A synthetase~PFAM: AMP-dependent synthetase and ligase~SPTR: Q72J93 Acetyl-coenzyme A synthetase~PFAM: Domain of unknown function (DUF3448)%3B AMP-binding enzyme~TIGRFAM: acetate--CoA ligase gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0253 Trad_0254 Trad_0254 Trad_0254 298705 299070 + putative solute symporter protein COGs: COG4327 membrane protein~InterPro IPR019886~KEGG: ttj:TTHA0820 hypothetical protein~SPTR: Q72K59 RNA polymerase sigma-32 factor~TIGRFAM: putative solute symporter protein~PFAM: Protein of unknown function%2C DUF485~TIGRFAM: probable solute:sodium symporter small subunit gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0254 Trad_0255 Trad_0255 Trad_0255 299074 300741 + putative sodium symporter protein COGs: COG4147 symporter~InterPro IPR001734:IPR019899:IPR019900:IPR018212~KEGG: cts:Ctha_1886 Na+/solute symporter~PFAM: Na+/solute symporter~SPTR: Q1NXB2 Na+/solute symporter~TIGRFAM: putative sodium symporter protein%3B SSS sodium solute transporter superfamily~PFAM: Sodium:solute symporter family~TIGRFAM: probable sodium:solute symporter%2C VC_2705 subfamily%3B SSS sodium solute transporter superfamily gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0255 Trad_0256 Trad_0256 Trad_0256 301045 301548 - hypothetical protein KEGG: pjd:Pjdr2_0568 hypothetical protein~SPTR: C6CRG5 Putative uncharacterized protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0256 Trad_0257 Trad_0257 Trad_0257 301637 302107 + 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase~InterPro IPR003526:IPR020555~KEGG: ddr:Deide_02620 putative 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%2C (MECPS%2C MECDP-synthase)~PFAM: MECDP-synthase~PRIAM: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~SPTR: C1CZ33 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~PFAM: YgbB family~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0257 Trad_0258 Trad_0258 Trad_0258 302123 303241 - hypothetical protein KEGG: amr:AM1_3977 heat shock protein HtpX~SPTR: B0C9E9 Probable protease htpX homolog gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0258 Trad_0259 Trad_0259 Trad_0259 303539 304684 - S-layer domain protein InterPro IPR001119:IPR005474~KEGG: dge:Dgeo_1597 S-layer-like protein region~PFAM: S-layer domain protein~SPTR: Q1IXZ2 S-layer-like protein region~PFAM: S-layer homology domain gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0259 Trad_0260 Trad_0260 Trad_0260 304851 305168 - Rieske (2Fe-2S) iron-sulfur domain protein COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase~InterPro IPR017941~KEGG: ddr:Deide_16700 putative benzene 1%2C2-dioxygenase system ferredoxin subunit~PFAM: Rieske [2Fe-2S] iron-sulphur domain~SPTR: C1CWS4 Putative benzene 1%2C2-dioxygenase system ferredoxin subunit~PFAM: Rieske [2Fe-2S] domain gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0260 Trad_0261 Trad_0261 Trad_0261 305238 306551 - FeS assembly protein SufD COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component~InterPro IPR011542:IPR000825~KEGG: dge:Dgeo_0472 FeS assembly protein SufD~PFAM: SufBD protein~SPTR: Q1J160 FeS assembly protein SufD~TIGRFAM: FeS assembly protein SufD~PFAM: Uncharacterized protein family (UPF0051)~TIGRFAM: FeS assembly protein SufD%2C group 1 gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0261 Trad_0262 Trad_0262 Trad_0262 306645 306950 - plasmid stabilization system InterPro IPR007712~KEGG: pph:Ppha_1705 plasmid stabilization system~PFAM: plasmid stabilization system~SPTR: B0BFV1 Putative integron gene cassette protein~PFAM: Plasmid stabilisation system protein gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0262 Trad_0263 Trad_0263 Trad_0263 306931 307152 - Putative addiction module component CHP02574 family protein InterPro IPR013406~KEGG: cli:Clim_0591 addiction module component%2C TIGR02574 family~PFAM: Putative addiction module component CHP02574 family protein~SPTR: Q0YUM6 Putative uncharacterized protein~PFAM: Putative addiction module component gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0263 Trad_0264 Trad_0264 Trad_0264 307238 308647 - FeS assembly protein SufB COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component~InterPro IPR010231:IPR000825~KEGG: dge:Dgeo_0473 FeS assembly protein SufB~PFAM: SufBD protein~SPTR: Q1J159 FeS assembly protein SufB~TIGRFAM: FeS assembly protein SufB~PFAM: Uncharacterized protein family (UPF0051)~TIGRFAM: FeS assembly protein SufB gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0264 Trad_0265 Trad_0265 Trad_0265 308666 309418 - FeS assembly ATPase SufC COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component~InterPro IPR003439:IPR010230:IPR003593~KEGG: dge:Dgeo_0474 FeS assembly ATPase SufC~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: B7A613 FeS assembly ATPase SufC~TIGRFAM: FeS assembly ATPase SufC~PFAM: ABC transporter~TIGRFAM: FeS assembly ATPase SufC gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0265 Trad_0266 Trad_0266 Trad_0266 309623 310570 - serine/threonine protein kinase COGs: COG0515 Serine/threonine protein kinase~InterProIPR000719:IPR017442:IPR011009:IPR020635:IPR 002290:IPR017441:IPR008271~KEGG: dra:DR_1213 serine/threonine protein kinase%2C putative~PFAM: Serine/threonine-protein kinase-like domain~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C subgroup%2C catalytic domain~SPTR: Q9RV17 Serine/threonine protein kinase%2C putative~PFAM: Protein kinase domain gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0266 Trad_0267 Trad_0267 Trad_0267 310577 311251 - conserved hypothetical protein COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold~KEGG: ttj:TTHA1283 hypothetical protein~SPTR: B7A647 Beta-lactamase domain protein~PFAM: Metallo-beta-lactamase superfamily gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0267 Trad_0268 Trad_0268 Trad_0268 311346 312665 - GTP cyclohydrolase II COGs: COG0807 GTP cyclohydrolase II~InterPro IPR000422:IPR000926:IPR016299:IPR017945~KEGG: tth:TTC0697 GTP cyclohydrolase II/3%2C4-dihydroxy-2-butanone-4-phosphate synthase~PFAM: GTP cyclohydrolase II%3B 34-dihydroxy-2-butanone 4-phosphate synthase~SPTR: C1XFM3 GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~PFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0268 Trad_0269 Trad_0269 Trad_0269 312662 313324 - riboflavin synthase%2C alpha subunit COGs: COG0307 Riboflavin synthase alpha chain~InterPro IPR001783:IPR017938~KEGG: dra:DR_0154 riboflavin synthase subunit alpha~PFAM: Lumazine-binding protein~PRIAM: Riboflavin synthase~SPTR: Q9RY00 Riboflavin synthase%2C alpha subunit~TIGRFAM: riboflavin synthase%2C alpha subunit~PFAM: Lumazine binding domain~TIGRFAM: riboflavin synthase%2C alpha subunit gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0269 Trad_0270 Trad_0270 Trad_0270 313325 314506 - riboflavin biosynthesis protein RibD COGs: COG0117 Pyrimidine deaminase~InterProIPR004794:IPR011549:IPR002125:IPR002734:IPR 016193:IPR016192~KEGG: ttj:TTHA1064 diaminohydroxyphosphoriboxylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase (RibD)~PFAM: bifunctional deaminase-reductase domain protein%3B CMP/dCMP deaminase zinc-binding~PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase.%2C 5-amino-6-(5-phosphoribosylamino)uracil reductase~SPTR: C1XFM1 5-amino-6-(5-phosphoribosylamino)uracil reductase%3B diaminohydroxyphosphoribosylaminopyrimidine deaminase~TIGRFAM: riboflavin biosynthesis protein RibD~PFAM: RibD C-terminal domain%3B Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: riboflavin-specific deaminase C-terminal domain%3B riboflavin biosynthesis protein RibD gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0270 Trad_0271 Trad_0271 Trad_0271 314993 316585 + PAS/PAC sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterProIPR005467:IPR000014:IPR000700:IPR013767:IPR 011712:IPR003594:IPR001610~KEGG: hla:Hlac_3597 PAS/PAC sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerisation and phosphoacceptor region%3B PAS fold domain protein~SMART: ATP-binding region ATPase domain protein%3B PAC repeat-containing protein%3B PAS domain containing protein~SPTR: B9LXB3 Sensor protein~TIGRFAM: PAS sensor protein~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B PAS fold~TIGRFAM: PAS domain S-box gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0271 Trad_0272 Trad_0272 Trad_0272 316615 317844 + peptidase M29 aminopeptidase II COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T)~InterPro IPR000787~KEGG: mes:Meso_3021 aminopeptidase T~PFAM: peptidase M29 aminopeptidase II~SPTR: Q11DY2 Aminopeptidase T. Metallo peptidase. MEROPS family M29~PFAM: Thermophilic metalloprotease (M29) gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0272 Trad_0273 Trad_0273 Trad_0273 317976 319772 + ATP-dependent DNA helicase RecQ COGs: COG0514 Superfamily II DNA helicase~InterProIPR002121:IPR014021:IPR001650:IPR006293:IPR 018329:IPR011545:IPR018982:IPR010997:IPR014001~KEGG: tgr:Tgr7_1931 ATP-dependent DNA helicase RecQ~PFAM: RQC domain%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B HRDC domain protein~SMART: DEAD-like helicase %3B helicase domain protein%3B HRDC domain protein~SPTR: C5S9E9 ATP-dependent DNA helicase RecQ~TIGRFAM: ATP-dependent DNA helicase RecQ%3B ATP-dependent DNA helicase%2C RecQ family~PFAM: Helicase conserved C-terminal domain%3B RQC domain%3B HRDC domain%3B DEAD/DEAH box helicase~TIGRFAM: ATP-dependent DNA helicase RecQ%3B ATP-dependent DNA helicase%2C RecQ family gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0273 Trad_0274 Trad_0274 Trad_0274 319769 321736 - methionyl-tRNA synthetase COGs: COG0143 Methionyl-tRNA synthetase~InterProIPR002547:IPR002304:IPR004495:IPR015413:IPR 014758:IPR009080:IPR016027:IPR014729:IPR012340~KEGG: tth:TTC0931 methionyl-tRNA synthetase~PFAM: tRNA synthetase class I (M)%3B t-RNA-binding domain protein~SPTR: B7A6F5 Methionyl-tRNA synthetase~TIGRFAM: methionyl-tRNA synthetase%3B methionyl-tRNA synthetase%2C beta subunit~PFAM: tRNA synthetases class I (M)%3B Putative tRNA binding domain~TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain%3B methionyl-tRNA synthetase gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0274 Trad_0275 Trad_0275 Trad_0275 322037 322471 + UspA domain protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016:IPR006015:IPR014729~KEGG: sil:SPO2371 universal stress protein family protein~PFAM: UspA domain protein~SPTR: A3VZ57 Universal stress protein family protein~PFAM: Universal stress protein family gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0275 Trad_0276 Trad_0276 Trad_0276 322605 323993 + amino acid carrier protein COGs: COG1115 Na+/alanine symporter~InterPro IPR001463~KEGG: vvy:VV2044 sodium/alanine symporter~PFAM: sodium:alanine symporter~SPTR: C9NUH2 Na(+)-linked D-alanine glycine permease~TIGRFAM: amino acid carrier protein~PFAM: Sodium:alanine symporter family~TIGRFAM: amino acid carrier protein gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0276 Trad_0277 Trad_0277 Trad_0277 324093 324935 + Superoxide dismutase COGs: COG0605 Superoxide dismutase~InterProIPR017909:IPR006311:IPR019831:IPR019832:IPR 001189:IPR019833~KEGG: rmr:Rmar_0920 superoxide dismutase~PFAM: Manganese/iron superoxide dismutase-like~PRIAM: Superoxide dismutase~SPTR: D0MH29 Superoxide dismutase~PFAM: Iron/manganese superoxide dismutases%2C alpha-hairpin domain%3B Iron/manganese superoxide dismutases%2C C-terminal domain gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0277 Trad_0278 Trad_0278 Trad_0278 324942 325346 - conserved hypothetical protein KEGG: bbt:BBta_5025 hypothetical protein~SPTR: A5ELI4 Putative uncharacterized protein gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0278 Trad_0279 Trad_0279 Trad_0279 325441 325983 + transcriptional regulator%2C TetR family InterPro IPR001647:IPR009057:IPR012287~KEGG: dra:DR_0720 TetR family transcriptional regulator~PFAM: regulatory protein TetR~SPTR: Q9RWE9 Transcriptional regulator%2C TetR family~PFAM: Bacterial regulatory proteins%2C tetR family gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0279 Trad_0280 Trad_0280 Trad_0280 326067 326474 + transcriptional repressor%2C CopY family COGs: COG3682 transcriptional regulator protein~InterPro IPR005650:IPR011991~KEGG: mxa:MXAN_4242 putative transcriptional regulator~PFAM: Penicillinase repressor~SPTR: Q1D4K6 Putative transcriptional regulator~PFAM: Penicillinase repressor gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0280 Trad_0281 Trad_0281 Trad_0281 326464 329673 + peptidase M56 BlaR1 COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component~InterProIPR008756:IPR013784:IPR008969:IPR008957:IPR 018062~KEGG: sus:Acid_0899 peptidase M56%2C BlaR1~PFAM: peptidase M56 BlaR1~SPTR: Q09BI6 TonB domain/peptidase M56 domain protein~PFAM: BlaR1 peptidase M56 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0281 Trad_0282 Trad_0282 Trad_0282 329748 330020 - hypothetical protein KEGG: gwc:GWCH70_1545 cobalamin biosynthesis protein CbiM~SPTR: C5DAM9 Cobalamin biosynthesis protein CbiM gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0282 Trad_0283 Trad_0283 Trad_0283 330699 331787 + Radical SAM domain protein COGs: COG1533 DNA repair photolyase~InterPro IPR007197~KEGG: npu:Npun_F6062 spore photoproduct lyase~PFAM: Radical SAM domain protein~SPTR: B2IUV8 Spore photoproduct lyase~TIGRFAM: spore photoproduct lyase gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0283 Trad_0284 Trad_0284 Trad_0284 331829 332881 + radical SAM domain-containing protein COGs: COG1533 DNA repair photolyase~KEGG: mch:Mchl_3457 radical SAM domain-containing protein~SPTR: B7KUP8 Radical SAM domain-containing protein gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0284 Trad_0285 Trad_0285 Trad_0285 332886 334025 - Inosine/uridine-preferring nucleoside hydrolase InterPro IPR001910~KEGG: pdi:BDI_1655 putative nucleoside hydrolase~PFAM: Inosine/uridine-preferring nucleoside hydrolase~SPTR: B7B871 Putative uncharacterized protein~PFAM: Inosine-uridine preferring nucleoside hydrolase gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0285 Trad_0286 Trad_0286 Trad_0286 334631 335239 + electron transport protein SCO1/SenC COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems~InterPro IPR017936:IPR003782:IPR012336:IPR012335~KEGG: sti:Sthe_0241 electron transport protein SCO1/SenC~PFAM: electron transport protein SCO1/SenC~SPTR: D1C6E2 Electron transport protein SCO1/SenC~PFAM: SCO1/SenC gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0286 Trad_0287 Trad_0287 Trad_0287 335492 336427 - domain of unknown function DUF1731 COGs: COG1090 nucleoside-diphosphate sugar epimerase~InterPro IPR010099:IPR001509:IPR013549:IPR016040~KEGG: rxy:Rxyl_0724 hypothetical protein~PFAM: domain of unknown function DUF1731%3B NAD-dependent epimerase/dehydratase~SPTR: Q1AY35 Putative uncharacterized protein~PFAM: NAD dependent epimerase/dehydratase family%3B Domain of unknown function (DUF1731)~TIGRFAM: conserved hypothetical protein TIGR01777 gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0287 Trad_0288 Trad_0288 Trad_0288 336490 336747 - hypothetical protein KEGG: dra:DR_0650 hypothetical protein~SPTR: C1XMZ9 Putative uncharacterized protein gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0288 Trad_0289 Trad_0289 Trad_0289 336821 337846 + aspartate-semialdehyde dehydrogenase COGs: COG0136 Aspartate-semialdehyde dehydrogenase~InterProIPR005986:IPR012080:IPR000534:IPR012280:IPR 016040~KEGG: syf:Synpcc7942_1848 aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase dimerisation region%3B Semialdehyde dehydrogenase NAD - binding~PRIAM: Aspartate-semialdehyde dehydrogenase~SPTR: B4W096 Aspartate-semialdehyde dehydrogenase~TIGRFAM: aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0289 Trad_0290 Trad_0290 Trad_0290 337992 338471 + membrane protein AbrB duplication COGs: COG3180 Putative ammonia monooxygenase~InterPro IPR017516~KEGG: bra:BRADO6545 hypothetical protein~SPTR: A4Z1X7 Putative uncharacterized protein~TIGRFAM: membrane protein AbrB duplication~PFAM: Putative ammonia monooxygenase~TIGRFAM: membrane protein AbrB duplication gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0290 Trad_0291 Trad_0291 Trad_0291 338505 338705 + phage shock protein C%2C PspC COGs: COG1983 Putative stress-responsive transcriptional regulator protein~InterPro IPR007168~KEGG: kol:Kole_0955 phage shock protein C%2C PspC~PFAM: PspC domain protein~SPTR: C5CGZ9 Phage shock protein C%2C PspC~PFAM: PspC domain gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0291 Trad_0292 Trad_0292 Trad_0292 338752 339819 - NAD-dependent epimerase/dehydratase COGs: COG1087 UDP-glucose 4-epimerase~InterPro IPR001509:IPR008089:IPR016040~KEGG: app:CAP2UW1_3278 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: C7RIG9 NAD-dependent epimerase/dehydratase~PFAM: NAD dependent epimerase/dehydratase family gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0292 Trad_0293 Trad_0293 Trad_0293 340057 340797 + stationary-phase survival protein SurE COGs: COG0496 acid phosphatase~InterPro IPR002828~KEGG: cpi:Cpin_2160 stationary-phase survival protein SurE~PFAM: Survival protein SurE~SPTR: C1XMF5 Exopolyphosphatase%3B 5'-nucleotidase%3B 3'-nucleotidase~TIGRFAM: stationary-phase survival protein SurE~PFAM: Survival protein SurE~TIGRFAM: 5'/3'-nucleotidase SurE gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0293 Trad_0294 Trad_0294 Trad_0294 340861 341616 - Stf0 sulfotransferase COGs: COG4424 conserved hypothetical protein~InterPro IPR015124~KEGG: rxy:Rxyl_2350 hypothetical protein~PFAM: Stf0 sulphotransferase~SPTR: Q1ATK0 Putative uncharacterized protein~PFAM: Stf0 sulphotransferase gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0294 Trad_0295 Trad_0295 Trad_0295 341613 342017 - conserved hypothetical protein KEGG: ava:Ava_1897 hypothetical protein~SPTR: Q8YQL8 Alr3803 protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0295 Trad_0296 Trad_0296 Trad_0296 342014 342880 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: dge:Dgeo_0907 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XNE2 Mannose ABC transporter membrane protein%3B glucose ABC transporter membrane protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0296 Trad_0297 Trad_0297 Trad_0297 342877 343995 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: tth:TTC0327 glucose transport system permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XNE1 Mannose ABC transporter membrane protein%3B glucose ABC transporter membrane protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0297 Trad_0298 Trad_0298 Trad_0298 344102 345337 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: ttj:TTHA0688 sugar ABC transporter%2C substrate-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q5SKF5 Sugar ABC transporter%2C substrate-binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0298 Trad_0299 Trad_0299 Trad_0299 345460 346686 - putative phytochrome sensor protein COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism~InterPro IPR003018:IPR001867~KEGG: nca:Noca_3971 transcriptional regulator domain-containing protein~PFAM: transcriptional regulator domain protein%3B GAF domain protein~SPTR: A3THM0 Putative uncharacterized protein~manually curated~PFAM: Transcriptional regulatory protein%2C C terminal gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0299 Trad_0300 Trad_0300 Trad_0300 348719 351007 + ATP-dependent DNA helicase RecG COGs: COG1200 RecG-like helicase~InterProIPR014021:IPR001650:IPR004609:IPR004365:IPR 011545:IPR016027:IPR014001~KEGG: ddr:Deide_09960 putative ATP-dependent DNA helicase~PFAM: DEAD/DEAH box helicase domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: C1XID6 ATP-dependent DNA helicase RecG~TIGRFAM: ATP-dependent DNA helicase RecG~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase%3B OB-fold nucleic acid binding domain~TIGRFAM: ATP-dependent DNA helicase RecG gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0300 Trad_0301 Trad_0301 Trad_0301 351113 351577 + hypothetical protein KEGG: sus:Acid_3738 hypothetical protein~SPTR: Q01NA9 Putative uncharacterized protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0301 Trad_0302 Trad_0302 Trad_0302 351731 353305 + D-3-phosphoglycerate dehydrogenase COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase~InterProIPR006236:IPR006139:IPR006140:IPR002912:IPR 016040~KEGG: ttj:TTHA0952 D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B amino acid-binding ACT domain protein~SPTR: B7A719 D-3-phosphoglycerate dehydrogenase~TIGRFAM: D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B ACT domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain~TIGRFAM: D-3-phosphoglycerate dehydrogenase gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0302 Trad_0303 Trad_0303 Trad_0303 353305 354441 + aminotransferase class V COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase~InterPro IPR000192:IPR015424:IPR015421~KEGG: ddr:Deide_09840 putative aminotransferase class-V~PFAM: aminotransferase class V~SPTR: C1CUJ8 Putative Aminotransferase class-V~PFAM: Aminotransferase class-V gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0303 Trad_0304 Trad_0304 Trad_0304 354431 354874 + HEPN domain protein COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN~InterPro IPR007842~KEGG: tth:TT_P0020 hypothetical protein~PFAM: HEPN domain protein~SMART: HEPN domain protein~SPTR: Q746N3 Hypothetical conserved protein~manually curated~PFAM: HEPN domain gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0304 Trad_0305 Trad_0305 Trad_0305 354798 355160 + conserved hypothetical protein KEGG: ttj:TTHB064 hypothetical protein~SPTR: Q746N2 Hypothetical conserved protein~manually curated~PFAM: Nucleotidyltransferase domain gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0305 Trad_0306 Trad_0306 Trad_0306 355177 355626 + conserved hypothetical protein KEGG: aeh:Mlg_1165 hypothetical protein~SPTR: Q1K2R9 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2721) gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0306 Trad_0307 Trad_0307 Trad_0307 355623 356933 - pseudogene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0307 Trad_0308 Trad_0308 Trad_0308 357059 358312 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: vap:Vapar_0761 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: C6MPC9 Glycosyl transferase group 1~PFAM: Glycosyl transferases group 1 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0308 Trad_0309 Trad_0309 Trad_0309 358309 359079 - Methyltransferase type 12 InterPro IPR013217~KEGG: dge:Dgeo_1186 methyltransferase type 11~PFAM: Methyltransferase type 12~SPTR: Q1IZ51 Methyltransferase type 11~PFAM: Methyltransferase domain gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0309 Trad_0310 Trad_0310 Trad_0310 359085 360725 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR017871:IPR001140:IPR003439:IPR017940:IPR 011527:IPR003593~KEGG: met:M446_4330 lipid ABC transporter ATPase/inner membrane protein~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: C1XSC5 ABC-type multidrug transport system%2C ATPase and permease component~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0310 Trad_0311 Trad_0311 Trad_0311 360722 361945 - glycosyl transferase family 19 InterPro IPR003835~KEGG: cyh:Cyan8802_2729 hypothetical protein~PFAM: glycosyl transferase family 19~SPTR: C1XSC3 Lipid A disaccharide synthetase~PFAM: Lipid-A-disaccharide synthetase gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0311 Trad_0312 Trad_0312 Trad_0312 362070 362849 - acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase COGs: COG1043 Acyl-(acyl carrier protein)~InterPro IPR001451:IPR010137:IPR011004~KEGG: noc:Noc_1752 UDP-N-acetylglucosamine acyltransferase~PFAM: transferase hexapeptide repeat containing protein~PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase~SPTR: C1XSC2 Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase~TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase~TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0312 Trad_0313 Trad_0313 Trad_0313 362883 363341 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase~InterPro IPR013114:IPR010084~KEGG: ttj:TTHA1815 (3R)-hydroxymyristoyl-acyl carrier protein dehydratase~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ~SPTR: C7IF99 Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ~TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: FabA-like domain~TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0313 Trad_0314 Trad_0314 Trad_0314 363355 364341 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: tai:Taci_0947 oxidoreductase domain protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C1XSC0 Predicted dehydrogenase~PFAM: Oxidoreductase family%2C C-terminal alpha/beta domain%3B Oxidoreductase family%2C NAD-binding Rossmann fold gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0314 Trad_0315 Trad_0315 Trad_0315 364482 365264 - UDP-3-0-acyl N-acetylglucosamine deacetylase COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase~InterPro IPR004463:IPR020568:IPR015870:IPR011334~KEGG: sfu:Sfum_1931 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase~SPTR: C1XSB9 UDP-3-O-acyl-N-acetylglucosamine deacetylase~PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase~TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0315 Trad_0316 Trad_0316 Trad_0316 365342 368206 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl)~InterPro IPR018357:IPR001451:IPR011004:IPR007691~KEGG: mrd:Mrad2831_3438 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase~PFAM: transferase hexapeptide repeat containing protein~SPTR: C1XGQ5 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase~TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0316 Trad_0317 Trad_0317 Trad_0317 368211 369320 - cell shape determining protein MreB/Mrl COGs: COG1077 Actin-like ATPase involved in cell morphogenesis~InterPro IPR004753~KEGG: mta:Moth_2371 rod shape-determining protein Mbl~PFAM: cell shape determining protein MreB/Mrl~SPTR: Q2RFY6 Rod shape-determining protein MreB~PFAM: MreB/Mbl protein~TIGRFAM: cell shape determining protein%2C MreB/Mrl family gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0317 Trad_0318 Trad_0318 Trad_0318 369374 369961 - peptidase M22 glycoprotease COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone~InterPro IPR000905~KEGG: dge:Dgeo_1525 peptidase M22%2C glycoprotease~PFAM: peptidase M22 glycoprotease~SPTR: Q1YFE7 Putative protease%2C peptidase M22 family~PFAM: Glycoprotease family gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0318 Trad_0319 Trad_0319 Trad_0319 370194 370430 - hypothetical protein KEGG: hypothetical protein~SPTR: B8A0H0 Putative uncharacterized protein gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0319 Trad_0320 Trad_0320 Trad_0320 370511 370951 - protein of unknown function UPF0079 COGs: COG0802 ATPase or kinase~InterPro IPR003442~KEGG: ddr:Deide_23210 hypothetical protein~PFAM: protein of unknown function UPF0079~SPTR: C1XUT3 Conserved hypothetical nucleotide-binding protein~PFAM: Uncharacterised P-loop hydrolase UPF0079~TIGRFAM: conserved hypothetical nucleotide-binding protein gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0320 Trad_0321 Trad_0321 Trad_0321 371016 372968 - hypothetical protein KEGG: dge:Dgeo_0054 hypothetical protein~SPTR: Q1J2C7 Putative uncharacterized protein gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0321 Trad_0322 Trad_0322 Trad_0322 372971 374245 - hypothetical protein KEGG: ddr:Deide_00510 conserved hypothetical protein%2C precursor%3B putative membrane protein~SPTR: C1CXP3 Putative uncharacterized protein gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0322 Trad_0323 Trad_0323 Trad_0323 374460 375080 + guanylate kinase COGs: COG0194 Guanylate kinase~InterPro IPR008144:IPR017665:IPR008145~KEGG: ttj:TTHA1562 guanylate kinase~PFAM: guanylate kinase~PRIAM: Guanylate kinase~SMART: guanylate kinase/L-type calcium channel region~SPTR: Q5SI18 Guanylate kinase~TIGRFAM: guanylate kinase~PFAM: Guanylate kinase%3B Uncharacterised conserved protein (DUF2315)~TIGRFAM: guanylate kinase gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0323 Trad_0324 Trad_0324 Trad_0324 375212 375520 + DNA-directed RNA polymerase%2C omega subunit InterPro IPR006110:IPR003716~KEGG: dge:Dgeo_0252 DNA-directed RNA polymerase subunit omega~PFAM: RNA polymerase Rpb6~SPTR: Q1J1S9 DNA-directed RNA polymerase subunit omega~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0324 Trad_0325 Trad_0325 Trad_0325 375587 376774 + phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase~InterPro IPR003382:IPR007085:IPR005252~KEGG: ttj:TTHA1560 DNA/pantothenate metabolism flavoprotein~PFAM: DNA/pantothenate metabolism flavoprotein domain protein%3B flavoprotein~PRIAM: Phosphopantothenate--cysteine ligase~SPTR: Q5SI20 DNA/pantothenate metabolism flavoprotein~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: DNA / pantothenate metabolism flavoprotein%3B Flavoprotein~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase%2C prokaryotic gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0325 Trad_0326 Trad_0326 Trad_0326 376837 377295 + arginine repressor%2C ArgR COGs: COG1438 Arginine repressor~InterPro IPR001669:IPR011991~KEGG: dge:Dgeo_2316 arginine repressor%2C ArgR~PFAM: arginine repressor~SPTR: Q1IVX6 Arginine repressor%2C ArgR~TIGRFAM: arginine repressor~PFAM: Arginine repressor%2C C-terminal domain%3B Arginine repressor%2C DNA binding domain~TIGRFAM: arginine repressor gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0326 Trad_0327 Trad_0327 Trad_0327 377337 379676 + Tetratricopeptide TPR_4 InterPro IPR011717:IPR013026:IPR011990:IPR019734~KEGG: ttj:TTHA0421 hypothetical protein~PFAM: Tetratricopeptide TPR_4~SPTR: B7A850 Tetratricopeptide TPR_2 repeat protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0327 Trad_0328 Trad_0328 Trad_0328 379673 380788 - glutamate 5-kinase COGs: COG0263 Glutamate 5-kinase~InterProIPR019797:IPR001057:IPR001048:IPR002478:IPR 011529:IPR015947:IPR005715~KEGG: tpd:Teth39_1082 gamma-glutamyl kinase~PFAM: aspartate/glutamate/uridylate kinase%3B PUA domain containing protein~SMART: PUA domain containing protein~SPTR: A1HNY5 Glutamate 5-kinase~TIGRFAM: glutamate 5-kinase~PFAM: Amino acid kinase family%3B PUA domain~TIGRFAM: glutamate 5-kinase gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0328 Trad_0329 Trad_0329 Trad_0329 380959 381477 - putative phosphohistidine phosphatase%2C SixA COGs: COG2062 Phosphohistidine phosphatase SixA~InterPro IPR013078~KEGG: hoh:Hoch_3490 phosphohistidine phosphatase%2C SixA~PFAM: Phosphoglycerate mutase~SPTR: C1XXV3 Phosphohistidine phosphatase SixA~PFAM: Phosphoglycerate mutase family~TIGRFAM: phosphohistidine phosphatase SixA gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0329 Trad_0330 Trad_0330 Trad_0330 381479 382138 - adenylate cyclase COGs: COG3025 conserved hypothetical protein~InterPro IPR008172~KEGG: rca:Rcas_3586 CHAD domain-containing protein~PFAM: adenylate cyclase~SPTR: A7NPY9 CHAD domain containing protein~PFAM: CYTH domain gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0330 Trad_0331 Trad_0331 Trad_0331 382323 382937 + transcriptional repressor%2C LexA family COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase)~InterPro IPR006199:IPR019759:IPR015927:IPR011056~KEGG: cyc:PCC7424_5333 SOS-response transcriptional repressor%2C LexA~PFAM: Peptidase S24/S26A/S26B%2C conserved region%3B LexA DNA-binding domain protein~SPTR: B7KJK3 SOS-response transcriptional repressor%2C LexA~PFAM: LexA DNA binding domain%3B Peptidase S24-like~TIGRFAM: SOS regulatory protein LexA gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0331 Trad_0332 Trad_0332 Trad_0332 383059 383415 + hypothetical protein KEGG: sro:Sros_8573 formylmethionine deformylase~SPTR: A5CQB1 Putative carboxylesterase gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0332 Trad_0333 Trad_0333 Trad_0333 383417 384352 + conserved hypothetical protein COGs: COG4712 conserved hypothetical protein~KEGG: hau:Haur_0535 hypothetical protein~SPTR: A9AVA5 Putative uncharacterized protein gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0333 Trad_0334 Trad_0334 Trad_0334 384504 384743 + hypothetical protein KEGG: ote:Oter_2486 Sel1 domain-containing protein~SPTR: C1DYE5 Predicted protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0334 Trad_0335 Trad_0335 Trad_0335 384766 385620 - Hydroxymethylbilane synthase COGs: COG0181 Porphobilinogen deaminase~InterPro IPR000860~KEGG: ttj:TTHA0345 porphobilinogen deaminase~PFAM: Porphobilinogen deaminase~PRIAM: Hydroxymethylbilane synthase~SPTR: C1XR62 Hydroxymethylbilane synthase~PFAM: Porphobilinogen deaminase%2C C-terminal domain%3B Porphobilinogen deaminase%2C dipyromethane cofactor binding domain~TIGRFAM: porphobilinogen deaminase gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0335 Trad_0336 Trad_0336 Trad_0336 385780 386982 - S-adenosylmethionine synthetase COGs: COG0192 S-adenosylmethionine synthetase~InterPro IPR002133~KEGG: ttj:TTHA1642 S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase~PRIAM: Methionine adenosyltransferase~SPTR: Q5SHT8 S-adenosylmethionine synthetase~TIGRFAM: S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase%2C C-terminal domain%3B S-adenosylmethionine synthetase%2C central domain%3B S-adenosylmethionine synthetase%2C N-terminal domain~TIGRFAM: S-adenosylmethionine synthetase gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0336 Trad_0337 Trad_0337 Trad_0337 387154 387678 + GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR000182:IPR016181~KEGG: tte:TTE0782 histone acetyltransferase HPA2-like acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Q8RBN4 Histone acetyltransferase HPA2 and related acetyltransferases~PFAM: Acetyltransferase (GNAT) family gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0337 Trad_0338 Trad_0338 Trad_0338 387818 388414 + protein of unknown function DUF88 COGs: COG1432 conserved hypothetical protein~InterPro IPR002790~KEGG: ttj:TTHA1057 hypothetical protein~PFAM: protein of unknown function DUF88~SPTR: B7A7J0 Putative uncharacterized protein~PFAM: Protein of unknown function DUF88 gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0338 Trad_0339 Trad_0339 Trad_0339 388496 389371 - protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: afw:Anae109_2816 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: B9ZPL5 Putative uncharacterized protein~PFAM: EamA-like transporter family gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0339 Trad_0340 Trad_0340 Trad_0340 389576 389926 + transcriptional regulator%2C HxlR family COGs: COG1733 transcriptional regulator protein~InterPro IPR002577~KEGG: lsp:Bsph_2646 putative HTH-type transcriptional regulator~PFAM: helix-turn-helix HxlR type~SPTR: A3I669 Putative uncharacterized protein~PFAM: HxlR-like helix-turn-helix gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0340 Trad_0341 Trad_0341 Trad_0341 390380 391810 - glutamyl-tRNA(Gln) amidotransferase%2C B subunit COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)~InterProIPR017958:IPR006075:IPR006107:IPR018027:IPR 003789:IPR004413~KEGG: dge:Dgeo_0414 aspartyl/glutamyl-tRNA amidotransferase subunit B~PFAM: GatB region%3B GatB central domain protein%3B Asn/Gln amidotransferase~SPTR: C1XTX1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: GatB/GatE catalytic domain%3B GatB domain~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C B subunit gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0341 Trad_0342 Trad_0342 Trad_0342 391853 392710 - protein of unknown function DUF114 COGs: COG0616 Periplasmic serine protease (ClpP class)~InterPro IPR002825~KEGG: ttj:TTHA1475 hypothetical protein~PFAM: protein of unknown function DUF114~SPTR: C1XR10 ClpP class periplasmic serine protease~PFAM: Serine dehydrogenase proteinase gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0342 Trad_0343 Trad_0343 Trad_0343 392720 393397 - Rhomboid family protein COGs: COG0705 membrane protein~InterPro IPR002610~KEGG: ttj:TTHA1474 hypothetical protein~PFAM: Rhomboid family protein~SPTR: C1XR09 Uncharacterized membrane protein~PFAM: Rhomboid family gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0343 Trad_0344 Trad_0344 Trad_0344 393486 393923 + protein of unknown function DUF151 COGs: COG1259 conserved hypothetical protein~InterPro IPR003729~KEGG: ttj:TTHA1615 hypothetical protein~PFAM: protein of unknown function DUF151~SPTR: Q72I81 Putative uncharacterized protein~PFAM: Uncharacterised ACR%2C COG1259 gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0344 Trad_0345 Trad_0345 Trad_0345 394004 394813 - ABC transporter related protein COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components~InterPro IPR017871:IPR003439:IPR003593~KEGG: bbe:BBR47_56970 probable ABC transporter ATP binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C0Z8P7 Probable ABC transporter ATP binding protein~PFAM: ABC transporter gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0345 Trad_0346 Trad_0346 Trad_0346 394959 396197 - Citrate transporter COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease~InterPro IPR000802:IPR004680~KEGG: ote:Oter_0890 citrate transporter~PFAM: Citrate transporter~SPTR: B1ZWQ1 Citrate transporter~PFAM: Citrate transporter gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0346 Trad_0347 Trad_0347 Trad_0347 396247 396630 - ferric uptake regulation protein COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~KEGG: bbr:BB0215 ferric uptake regulation protein~SPTR: C9Z1V9 Fe regulatory protein~PFAM: Ferric uptake regulator family gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0347 Trad_0348 Trad_0348 Trad_0348 396773 397267 - conserved hypothetical protein KEGG: ote:Oter_2987 hypothetical protein~SPTR: C0ABY9 Putative uncharacterized protein gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0348 Trad_0349 Trad_0349 Trad_0349 397360 398553 - Threonyl/alanyl tRNA synthetase SAD COGs: COG2872 metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain~InterProIPR018164:IPR012947:IPR003156:IPR018165:IPR 018163~KEGG: ttj:TTHA0146 alanyl-tRNA synthetase-related protein~PFAM: Threonyl/alanyl tRNA synthetase SAD%3B Alanyl-tRNA synthetase%2C class IIc-like%3B phosphoesterase DHHA1~SPTR: C1XW66 Predicted metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain~PFAM: Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetases class II (A) gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0349 Trad_0350 Trad_0350 Trad_0350 398636 399253 + GTP cyclohydrolase I COGs: COG0302 GTP cyclohydrolase I~InterPro IPR018234:IPR020602:IPR001474~KEGG: tth:TTC1517 GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase~PRIAM: GTP cyclohydrolase I~SPTR: B7A8L3 GTP cyclohydrolase I~TIGRFAM: GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I~TIGRFAM: GTP cyclohydrolase I gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0350 Trad_0351 Trad_0351 Trad_0351 399507 399872 - hypothetical protein KEGG: met:M446_0172 beta-ketoacyl synthase~SPTR: Q6W5Q3 FscA gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0351 Trad_0352 Trad_0352 Trad_0352 400148 400651 - Ferritin Dps family protein COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant)~InterPro IPR002177:IPR008331:IPR009078:IPR012347~KEGG: chl:Chy400_3219 ferritin Dps family protein~PFAM: Ferritin Dps family protein~SPTR: B9LB24 Ferritin Dps family protein~PFAM: Ferritin-like domain gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0352 Trad_0353 Trad_0353 Trad_0353 400743 401039 - hypothetical protein KEGG: ank:AnaeK_0483 HAD-superfamily hydrolase%2C subfamily IIB~SPTR: B4UB75 HAD-superfamily hydrolase%2C subfamily IIB gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0353 Trad_0354 Trad_0354 Trad_0354 401219 402001 - HAD-superfamily hydrolase%2C subfamily IIB COGs: COG0561 hydrolase of the HAD superfamily~InterPro IPR013200:IPR006379~KEGG: ddr:Deide_3p01661 putative hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase type 3~SPTR: C1D3N1 Putative hydrolase~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIB~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily%3B HAD-superfamily hydrolase%2C subfamily IIB gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0354 Trad_0355 Trad_0355 Trad_0355 402203 402562 + succinate dehydrogenase%2C cytochrome b556 subunit InterPro IPR014314~KEGG: dge:Dgeo_0889 succinate dehydrogenase%2C cytochrome b subunit~SPTR: C1XVW6 Succinate dehydrogenase subunit C~TIGRFAM: succinate dehydrogenase%2C cytochrome b556 subunit~PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit~TIGRFAM: succinate dehydrogenase%2C cytochrome b556 subunit gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0355 Trad_0356 Trad_0356 Trad_0356 402562 403020 + succinate dehydrogenase%2C membrane subunit (SdhD) COGs: COG2142 Succinate dehydrogenase hydrophobic anchor subunit~KEGG: ttj:TTHA1455 succinate dehydrogenase%2C membrane subunit (SdhD)~SPTR: C1XVW5 Succinate dehydrogenase subunit D~PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit~TIGRFAM: succinate dehydrogenase%2C hydrophobic membrane anchor protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0356 Trad_0357 Trad_0357 Trad_0357 403088 404827 + succinate dehydrogenase%2C flavoprotein subunit COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit~InterProIPR003952:IPR013027:IPR003953:IPR004112:IPR 015939:IPR011281:IPR014006~KEGG: ttj:TTHA1454 succinate dehydrogenase flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein~SPTR: Q5SIC0 Succinate dehydrogenase%2C flavoprotein subunit~TIGRFAM: succinate dehydrogenase%2C flavoprotein subunit%3B succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit~PFAM: domain%3B FAD binding domain~TIGRFAM: succinate dehydrogenase%2C flavoprotein subunit%2C E. coli/mitochondrial subgroup%3B succinate dehydrogenase or fumarate reductase%2C flavoprotein subunitGram-negative/mitochondrial subgroup gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0357 Trad_0358 Trad_0358 Trad_0358 404916 405641 + succinate dehydrogenase and fumarate reductase iron-sulfur protein COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit~InterProIPR017900:IPR017896:IPR009051:IPR001041:IPR 012675:IPR012285:IPR004489~KEGG: tth:TTC1089 succinate dehydrogenase iron-sulfur subunit~PRIAM: Succinate dehydrogenase~SPTR: Q72IP3 Succinate dehydrogenase iron-sulfur protein~TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0358 Trad_0359 Trad_0359 Trad_0359 406103 407482 + magnesium transporter COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)~InterPro IPR006668:IPR000644:IPR006667:IPR006669~KEGG: swo:Swol_1082 divalent cation transporter~PFAM: MgtE integral membrane region%3B MgtE intracellular region%3B CBS domain containing protein~SMART: CBS domain containing protein~SPTR: Q0AY12 Divalent cation transporter~TIGRFAM: magnesium transporter~PFAM: MgtE intracellular N domain%3B Divalent cation transporter%3B CBS domain~TIGRFAM: Mg2+ transporter (mgtE) gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0359 Trad_0360 Trad_0360 Trad_0360 407616 408104 - hypothetical protein KEGG: pol-like protein ENS-3~SPTR: C1XP23 Putative uncharacterized protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0360 Trad_0361 Trad_0361 Trad_0361 409039 409809 - hypothetical protein InterPro IPR011042~KEGG: amf:AMF_178 TolB protein precursor (TolB)~SPTR: B9KHU7 TOLB protein (TolB) gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0361 Trad_0362 Trad_0362 Trad_0362 410026 410574 - transcriptional regulator%2C LuxR family InterPro IPR010916:IPR000792:IPR016032:IPR011991~KEGG: dge:Dgeo_2791 LuxR family transcriptional regulator~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~SPTR: Q1J2R1 Transcriptional regulator%2C LuxR family~PFAM: Bacterial regulatory proteins%2C luxR family gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0362 Trad_0363 Trad_0363 Trad_0363 410707 411537 + Bacitracin resistance protein BacA COGs: COG1968 Uncharacterized bacitracin resistance protein~InterPro IPR003824~KEGG: bcl:ABC1776 undecaprenyl pyrophosphate phosphatase~PFAM: Bacitracin resistance protein BacA~SPTR: B1C6D3 Putative uncharacterized protein~PFAM: Bacitracin resistance protein BacA~TIGRFAM: undecaprenyl-diphosphatase UppP gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0363 Trad_0364 Trad_0364 Trad_0364 411607 411999 - endoribonuclease L-PSP COGs: COG0251 Putative translation initiation inhibitor yjgF family~InterPro IPR019897:IPR006175:IPR013813:IPR006056~KEGG: rrs:RoseRS_2960 putative endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~SPTR: A5UXH2 Endoribonuclease L-PSP~TIGRFAM: endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~TIGRFAM: endoribonuclease L-PSP%2C putative gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0364 Trad_0365 Trad_0365 Trad_0365 412103 413065 - protein serine/threonine phosphatase COGs: COG0631 Serine/threonine protein phosphatase~InterPro IPR014045:IPR001932~KEGG: ttj:TTHA0187 putative protein phosphatase~PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~SPTR: C1XL98 Serine/threonine protein phosphatase~PFAM: Protein phosphatase 2C gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0365 Trad_0366 Trad_0366 Trad_0366 413165 414637 + glutamyl-tRNA(Gln) amidotransferase%2C A subunit COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~InterPro IPR020556:IPR000120:IPR004412~KEGG: dra:DR_1856 aspartyl/glutamyl-tRNA amidotransferase subunit A~PFAM: Amidase~SPTR: Q9RTA9 Glutamyl-tRNA(Gln) amidotransferase subunit A~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C A subunit~PFAM: Amidase~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C A subunit gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0366 Trad_0367 Trad_0367 Trad_0367 414806 414949 + ribosomal protein L34 InterPro IPR000271~KEGG: dge:Dgeo_1568 50S ribosomal protein L34~PFAM: ribosomal protein L34~SPTR: Q1IY21 50S ribosomal protein L34~TIGRFAM: ribosomal protein L34~PFAM: Ribosomal protein L34~TIGRFAM: ribosomal protein L34%2C bacterial type gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0367 Trad_0368 Trad_0368 Trad_0368 414955 415347 + ribonuclease P protein component InterPro IPR020539:IPR000100:IPR020568:IPR014721~KEGG: tth:TTC0077 ribonuclease P protein subunit~PFAM: ribonuclease P protein~SPTR: C1XNH4 Ribonuclease P protein component~TIGRFAM: ribonuclease P protein component~PFAM: Ribonuclease P~TIGRFAM: ribonuclease P protein component%2C eubacterial gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0368 Trad_0369 Trad_0369 Trad_0369 415344 415607 + protein of unknown function DUF37 COGs: COG0759 conserved hypothetical protein~InterPro IPR002696~KEGG: sep:SE1462 hypothetical protein~PFAM: protein of unknown function DUF37~SPTR: C5QY28 Alpha-hemolysin~PFAM: Domain of unknown function DUF37~TIGRFAM: conserved hypothetical protein TIGR00278 gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0369 Trad_0370 Trad_0370 Trad_0370 415604 417292 + membrane protein insertase%2C YidC/Oxa1 family COGs: COG0706 Preprotein translocase subunit YidC~InterPro IPR001708:IPR020001~KEGG: tth:TTC0075 hypothetical protein~PFAM: 60 kDa inner membrane insertion protein~SPTR: C1XUM9 Preprotein translocase subunit YidC~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family~PFAM: 60Kd inner membrane protein~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family%2C C-terminal domain gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0370 Trad_0371 Trad_0371 Trad_0371 417296 417877 + single-stranded nucleic acid binding R3H domain protein COGs: COG1847 RNA-binding protein~InterPro IPR001374~KEGG: ddr:Deide_01680 putative Jag-related protein%2C RNA binding protein~PFAM: single-stranded nucleic acid binding R3H domain protein~SMART: single-stranded nucleic acid binding R3H domain protein~SPTR: C1XUN0 Predicted RNA-binding protein~PFAM: R3H domain gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0371 Trad_0372 Trad_0372 Trad_0372 418161 419309 + conserved hypothetical protein KEGG: ava:Ava_4088 hypothetical protein~SPTR: B4B2X0 Putative uncharacterized protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0372 Trad_0373 Trad_0373 Trad_0373 419338 419799 + CMP/dCMP deaminase zinc-binding protein COGs: COG0590 Cytosine/adenosine deaminase~InterPro IPR002125:IPR016193~KEGG: npu:Npun_R2274 CMP/dCMP deaminase%2C zinc-binding~PFAM: CMP/dCMP deaminase zinc-binding~SPTR: Q8YND2 Alr4634 protein~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0373 Trad_0374 Trad_0374 Trad_0374 419799 420752 + Protein of unknown function DUF2419 InterPro IPR019438~KEGG: tro:trd_1774 hypothetical protein~PFAM: Protein of unknown function DUF2419~SPTR: B9L162 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2419) gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0374 Trad_0375 Trad_0375 Trad_0375 420856 421908 - nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase COGs: COG2038 NaMN:DMB phosphoribosyltransferase~InterPro IPR000169:IPR003200:IPR017846~KEGG: rrs:RoseRS_0559 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase~PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~SPTR: A5UQS8 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0375 Trad_0376 Trad_0376 Trad_0376 421905 423953 - cobyric acid synthase CobQ COGs: COG1492 Cobyric acid synthase~InterProIPR002586:IPR011698:IPR003203:IPR017929:IPR 004459~KEGG: dge:Dgeo_2874 cobyric acid synthase CobQ~PFAM: CobB/CobQ domain protein glutamine amidotransferase%3B Cobyrinic acid ac-diamide synthase%3B cobalbumin biosynthesis protein~PRIAM: Adenosylcobinamide-phosphate guanylyltransferase~SPTR: Q1J2I1 Cobyric acid synthase CobQ~TIGRFAM: cobyric acid synthase CobQ~PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase%3B CobQ/CobB/MinD/ParA nucleotide binding domain%3B CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: cobyric acid synthase CobQ gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0376 Trad_0377 Trad_0377 Trad_0377 423968 424627 - Phosphoglycerate mutase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR001345:IPR013078~KEGG: dra:DR_0278 phosphoglycerate mutase%2C putative~PFAM: Phosphoglycerate mutase~SPTR: Q9RXN2 Phosphoglycerate mutase%2C putative~PFAM: Phosphoglycerate mutase family gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0377 Trad_0378 Trad_0378 Trad_0378 424620 425696 - aminotransferase class I and II COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~InterPro IPR004839:IPR015424:IPR015421~KEGG: rxy:Rxyl_0650 L-threonine O-3-phosphate decarboxylase~PFAM: aminotransferase class I and II~SPTR: Q1AYA8 L-threonine O-3-phosphate decarboxylase~PFAM: Aminotransferase class I and II gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0378 Trad_0379 Trad_0379 Trad_0379 425683 426630 - cobalamin biosynthesis protein CobD COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB~InterPro IPR004485~KEGG: gau:GAU_0492 cobalamin biosynthesis protein CobD~PFAM: cobalamin biosynthesis protein CbiB~SPTR: C1A5M4 Cobalamin biosynthesis protein CobD~TIGRFAM: cobalamin biosynthesis protein CobD~PFAM: CobD/Cbib protein~TIGRFAM: cobalamin biosynthesis protein CobD gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0379 Trad_0380 Trad_0380 Trad_0380 426630 427196 - cob(I)alamin adenosyltransferase COGs: COG2109 ATP:corrinoid adenosyltransferase~InterPro IPR003724~KEGG: tth:TT_P0002 cob(I)alamin adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~PRIAM: Cob(I)yrinic acid a%2Cc-diamide adenosyltransferase~SPTR: B7AB23 Cob(I)alamin adenosyltransferase~TIGRFAM: cob(I)alamin adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~TIGRFAM: cob(I)alamin adenosyltransferase gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0380 Trad_0381 Trad_0381 Trad_0381 427189 427899 - protein of unknown function DUF105 COGs: COG1865 conserved hypothetical protein~InterPro IPR002808~KEGG: pth:PTH_1477 hypothetical protein~PFAM: protein of unknown function DUF105~SPTR: A5D257 Uncharacterized conserved protein~PFAM: Adenosylcobinamide amidohydrolase gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0381 Trad_0382 Trad_0382 Trad_0382 427896 428621 - cobalamin-5-phosphate synthase CobS COGs: COG0368 Cobalamin-5-phosphate synthase~InterPro IPR003805~KEGG: ddr:Deide_2p01460 putative cobalamin synthase~PFAM: cobalamin-5-phosphate synthase CobS~SPTR: C1XZH5 Cobalamin-5'-phosphate synthase~PFAM: Cobalamin-5-phosphate synthase~TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0382 Trad_0383 Trad_0383 Trad_0383 428628 429533 - periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: dge:Dgeo_2363 periplasmic binding protein~PFAM: periplasmic binding protein~SPTR: Q1J3Y0 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component~PFAM: Periplasmic binding protein gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0383 Trad_0384 Trad_0384 Trad_0384 429975 430817 + protein-(glutamine-N5) methyltransferase%2C release factor-specific COGs: COG2890 Methylase of polypeptide chain release factors~InterPro IPR002052:IPR007848:IPR004556:IPR019874~KEGG: dge:Dgeo_0068 HemK family modification methylase~PFAM: methyltransferase small~SPTR: Q1J2B3 Modification methylase%2C HemK family~TIGRFAM: protein-(glutamine-N5) methyltransferase%2C release factor-specific%3B modification methylase%2C HemK family~PFAM: Methyltransferase small domain~TIGRFAM: HemK family putative methylases%3B protein-(glutamine-N5) methyltransferase%2C release factor-specific gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0384 Trad_0385 Trad_0385 Trad_0385 431022 431543 - lipoprotein signal peptidase COGs: COG0597 Lipoprotein signal peptidase~InterPro IPR001872~KEGG: fph:Fphi_0398 lipoprotein signal peptidase II~PFAM: peptidase A8 signal peptidase II~PRIAM: Signal peptidase II~SPTR: B9ZMY6 Lipoprotein signal peptidase~TIGRFAM: lipoprotein signal peptidase~PFAM: Signal peptidase (SPase) II~TIGRFAM: lipoprotein signal peptidase gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0385 Trad_0386 Trad_0386 Trad_0386 431743 436596 + NAD-glutamate dehydrogenase COGs: COG2902 NAD-specific glutamate dehydrogenase~InterPro IPR020539:IPR007780:IPR016040~KEGG: rxy:Rxyl_2529 glutamate dehydrogenase (NAD)~PFAM: NAD-glutamate dehydrogenase~SPTR: Q1AT32 Glutamate dehydrogenase (NAD)~PFAM: Bacterial NAD-glutamate dehydrogenase gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0386 Trad_0387 Trad_0387 Trad_0387 436593 437735 - oxygen-independent coproporphyrinogen III oxidase COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase~InterPro IPR007197:IPR010723:IPR004559:IPR006638~KEGG: dra:DR_0130 coproporphyrinogen III oxidase%2C putative~PFAM: Radical SAM domain protein%3B HemN domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Q9RY22 Coproporphyrinogen III oxidase%2C putative~TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM superfamily%3B HemN C-terminal region~TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0387 Trad_0388 Trad_0388 Trad_0388 437859 438866 + putative RNA methylase COGs: COG0116 N6-adenine-specific DNA methylase~InterPro IPR002052:IPR000241~KEGG: rrs:RoseRS_2276 putative RNA methylase~PFAM: putative RNA methylase~SPTR: A5UVK2 Putative RNA methylase~PFAM: Putative RNA methylase family UPF0020 gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0388 Trad_0389 Trad_0389 Trad_0389 438916 439143 + ribosomal protein L28 InterPro IPR001383~KEGG: dge:Dgeo_2250 ribosomal protein L28~SPTR: Q1IW40 Ribosomal protein L28~TIGRFAM: ribosomal protein L28~PFAM: Ribosomal L28 family~TIGRFAM: ribosomal protein L28 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0389 Trad_0390 Trad_0390 Trad_0390 439293 440735 + type III restriction protein res subunit COGs: COG1061 DNA or RNA helicase of superfamily II~InterPro IPR006935:IPR001650:IPR014021:IPR014001~KEGG: amr:AM1_2461 type III restriction enzyme%2C res subunit~PFAM: type III restriction protein res subunit%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: B0C478 Type III restriction enzyme%2C res subunit~PFAM: Helicase conserved C-terminal domain%3B Type III restriction enzyme%2C res subunit gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0390 Trad_0391 Trad_0391 Trad_0391 440735 441951 + pseudogene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0391 Trad_0392 Trad_0392 Trad_0392 442008 442430 + methionine-R-sulfoxide reductase COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase~InterPro IPR002579:IPR011057~KEGG: syd:Syncc9605_0016 methionine sulfoxide reductase B~PFAM: Methionine sulfoxide reductase B~PRIAM: Peptide-methionine (R)-S-oxide reductase~SPTR: Q3ANN4 Methionine sulfoxide reductase B~TIGRFAM: methionine-R-sulfoxide reductase~PFAM: SelR domain~TIGRFAM: methionine-R-sulfoxide reductase gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0392 Trad_0393 Trad_0393 Trad_0393 442451 443935 + peptidase S10 serine carboxypeptidase COGs: COG2939 Carboxypeptidase C (cathepsin A)~InterPro IPR001563~KEGG: cag:Cagg_1649 peptidase S10 serine carboxypeptidase~PFAM: peptidase S10 serine carboxypeptidase~SPTR: C1XWK7 Carboxypeptidase C (Cathepsin A)~PFAM: Serine carboxypeptidase gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0393 Trad_0394 Trad_0394 Trad_0394 443984 444682 + hypothetical protein KEGG: chu:CHU_2164 M48 family peptidase~SPTR: A1ZMN2 Putative uncharacterized protein gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0394 Trad_0395 Trad_0395 Trad_0395 444666 445598 + aminotransferase class IV COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase~InterPro IPR001544~KEGG: vap:Vapar_5244 aminotransferase class IV~PFAM: aminotransferase class IV~SPTR: A0Z4Z3 Branched-chain amino acid aminotransferase%2C putative~PFAM: Aminotransferase class IV~TIGRFAM: D-amino acid aminotransferase%3B branched-chain amino acid aminotransferase%2C group I gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0395 Trad_0396 Trad_0396 Trad_0396 445595 446326 + hypothetical protein KEGG: GSVIVT00022872001%3B hypothetical protein LOC100264940~SPTR: D0DA48 Branched chain amino acid aminotransferase gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0396 Trad_0397 Trad_0397 Trad_0397 446510 447280 + hypothetical protein KEGG: hypothetical protein~SPTR: A8Q4L8 Putative uncharacterized protein gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0397 Trad_0398 Trad_0398 Trad_0398 447542 448144 + hypothetical protein KEGG: COL4A4%3B collagen%2C type IV%2C alpha 4%3B K06237 collagen%2C type IV%2C alpha~SPTR: C1E8K9 Predicted protein gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0398 Trad_0399 Trad_0399 Trad_0399 448147 448869 - RNA-binding S4 domain protein COGs: COG2302 conserved hypothetical protein contains S4-like domain~InterPro IPR002942~KEGG: dra:DR_0787 hypothetical protein~PFAM: RNA-binding S4 domain protein~SPTR: Q9RW82 Putative uncharacterized protein gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0399 Trad_0400 Trad_0400 Trad_0400 448881 449510 - CBS domain containing protein COGs: COG0517 FOG: CBS domain~InterPro IPR000644:IPR013785~KEGG: ttj:TTHA0829 putative acetoin utilization protein%2C acetoin dehydrogenase~PFAM: CBS domain containing protein~SMART: CBS domain containing protein~SPTR: C1XQK5 CBS domain-containing protein~PFAM: CBS domain gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0400 Trad_0401 Trad_0401 Trad_0401 449625 450941 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase~InterPro IPR013512:IPR013644:IPR003821:IPR016040~KEGG: tth:TTC0504 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein~PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase~SPTR: C1XT38 1-deoxy-D-xylulose 5-phosphate reductoisomerase~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%3B 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0401 Trad_0402 Trad_0402 Trad_0402 451026 452183 + peptidase M50 COGs: COG1994 Zn-dependent protease~InterPro IPR008915:IPR000644:IPR016483:IPR013785~KEGG: hla:Hlac_2601 peptidase M50~PFAM: peptidase M50%3B CBS domain containing protein~SMART: CBS domain containing protein~SPTR: C1XPA8 Zn-dependent protease~PFAM: CBS domain%3B Peptidase family M50 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0402 Trad_0403 Trad_0403 Trad_0403 452161 453036 - spermidine synthase COGs: COG0421 Spermidine synthase~InterPro IPR001045~KEGG: rmr:Rmar_2353 spermidine synthase~PFAM: Spermine synthase~SPTR: D0MEK3 Spermidine synthase~TIGRFAM: spermidine synthase~PFAM: Spermine/spermidine synthase~TIGRFAM: spermidine synthase gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0403 Trad_0404 Trad_0404 Trad_0404 453040 453435 - S-adenosylmethionine decarboxylase proenzyme COGs: COG1586 S-adenosylmethionine decarboxylase~InterPro IPR003826:IPR016067:IPR017716~KEGG: rmr:Rmar_2354 S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase related~SPTR: D0MEK4 S-adenosylmethionine decarboxylase proenzyme~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme%2C Bacillus form gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0404 Trad_0405 Trad_0405 Trad_0405 453767 454861 + peptidase M50 COGs: COG0750 membrane-associated Zn-dependent protease 1~InterPro IPR008915:IPR001478~KEGG: ddr:Deide_13240 putative membrane-associated zinc metalloproteases%3B putative membrane protein~PFAM: peptidase M50~SMART: PDZ/DHR/GLGF domain protein~SPTR: C1XT39 RIP metalloprotease RseP~PFAM: Peptidase family M50%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: RIP metalloprotease RseP gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0405 Trad_0406 Trad_0406 Trad_0406 454935 455564 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: ttj:TTHA0854 glycosyltransferase~PFAM: glycosyl transferase family 2~SPTR: B7A6B6 Glycosyl transferase family 2~PFAM: Glycosyl transferase family 2 gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0406 Trad_0407 Trad_0407 Trad_0407 455573 456205 + beta-lactamase-like protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: dge:Dgeo_2261 beta-lactamase-like protein~SPTR: Q1IW29 Beta-lactamase-like protein~PFAM: Metallo-beta-lactamase superfamily gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0407 Trad_0408 Trad_0408 Trad_0408 456215 456694 + phosphodiesterase%2C MJ0936 family COGs: COG0622 phosphoesterase~InterPro IPR004843:IPR000979~KEGG: pap:PSPA7_0444 hypothetical protein~PFAM: metallophosphoesterase~SPTR: A6UYF4 Putative uncharacterized protein~TIGRFAM: phosphodiesterase%2C MJ0936 family~TIGRFAM: phosphoesterase%2C MJ0936 family gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0408 Trad_0409 Trad_0409 Trad_0409 456691 458304 - Amidohydrolase 3 COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold~InterPro IPR013108:IPR011059~KEGG: mlo:mll2891 hypothetical protein~PFAM: Amidohydrolase 3~SPTR: C8STV8 Amidohydrolase 3~PFAM: Amidohydrolase family gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0409 Trad_0410 Trad_0410 Trad_0410 458383 458964 - Rieske (2Fe-2S) iron-sulfur domain protein COGs: COG0723 Rieske Fe-S protein~InterPro IPR005805:IPR017941~KEGG: dge:Dgeo_1251 Rieske (2Fe-2S) region~PFAM: Rieske [2Fe-2S] iron-sulphur domain~SPTR: Q1IYY7 Rieske (2Fe-2S) region~PFAM: Rieske [2Fe-2S] domain gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0410 Trad_0411 Trad_0411 Trad_0411 458974 460425 - Tetratricopeptide TPR_2 repeat protein InterPro IPR013105:IPR019734:IPR013026:IPR011990~KEGG: tth:TTC1035 hypothetical protein~PFAM: Tetratricopeptide TPR_2 repeat protein~SPTR: C1XSK0 Cytochrome c biogenesis factor gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0411 Trad_0412 Trad_0412 Trad_0412 460422 460880 - cytochrome C biogenesis protein COGs: COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes~InterPro IPR005616~KEGG: ttj:TTHA1402 cytochrome c-type biogenesis protein~PFAM: cytochrome C biogenesis protein~SPTR: Q5SIG7 Cytochrome c-type biogenesis protein~PFAM: Cytochrome C biogenesis protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0412 Trad_0413 Trad_0413 Trad_0413 460892 461467 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG0526 Thiol-disulfide isomerase and thioredoxins~InterProIPR017937:IPR000866:IPR017936:IPR012336:IPR 012335~KEGG: ttj:TTHA1728 hypothetical protein~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Q5SHK2 Putative uncharacterized protein TTHA1728~PFAM: Redoxin~TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases%2C DsbE subfamily gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0413 Trad_0414 Trad_0414 Trad_0414 461464 463497 - cytochrome c assembly protein COGs: COG1138 Cytochrome c biogenesis factor~InterPro IPR003567:IPR003568:IPR002541~KEGG: dra:DR_0346 cytochrome c-type biogenesis protein CcmF~PFAM: cytochrome c assembly protein~SPTR: Q9RXG7 Cytochrome c-type biogenesis protein CcmF~PFAM: Cytochrome C assembly protein~TIGRFAM: c-type cytochrome biogenesis protein CcmF gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0414 Trad_0415 Trad_0415 Trad_0415 463506 463943 - CcmE/CycJ protein COGs: COG2332 Cytochrome c-type biogenesis protein CcmE~InterPro IPR004329:IPR012340~KEGG: tth:TTC1039 cytochrome c-type biogenesis protein CcmE~PFAM: CcmE/CycJ protein~SPTR: B7A5K9 CcmE/CycJ protein~manually curated~PFAM: CcmE gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0415 Trad_0416 Trad_0416 Trad_0416 463916 464053 - hypothetical protein KEGG: bac:BamMC406_0420 type VI secretion protein IcmF~SPTR: Q0BIS1 ImcF domain protein gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0416 Trad_0417 Trad_0417 Trad_0417 464046 464804 - cytochrome c assembly protein COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component~InterPro IPR003557:IPR002541~KEGG: tth:TTC1041 heme exporter protein C~PFAM: cytochrome c assembly protein~SPTR: B7A5K7 Cytochrome c assembly protein~PFAM: Cytochrome C assembly protein gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0417 Trad_0418 Trad_0418 Trad_0418 464820 465551 - cytochrome c-type biogenesis protein CcmB COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component~InterPro IPR003544~KEGG: dra:DR_0407 cytochrome c-type biogenesis protein%2C heme exporter protein B~PFAM: cytochrome c-type biogenesis protein CcmB~SPTR: Q9RXA8 Cytochrome c-type biogenesis protein%2C heme exporter protein B~PFAM: CcmB protein~TIGRFAM: heme exporter protein CcmB gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0418 Trad_0419 Trad_0419 Trad_0419 465544 466236 - heme exporter protein CcmA COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR017871:IPR003439:IPR005895:IPR003593~KEGG: dra:DR_0406 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q9RXA9 ABC transporter%2C ATP-binding protein~TIGRFAM: heme exporter protein CcmA~PFAM: ABC transporter~TIGRFAM: heme ABC exporter%2C ATP-binding protein CcmA gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0419 Trad_0420 Trad_0420 Trad_0420 466233 466940 - cytochrome c biogenesis protein transmembrane region COGs: COG0785 Cytochrome c biogenesis protein~InterPro IPR003834~KEGG: gau:GAU_0930 cytochrome c-type biogenesis protein CcdA~PFAM: cytochrome c biogenesis protein transmembrane region~SPTR: C1XWX4 Cytochrome c biogenesis protein~PFAM: Cytochrome C biogenesis protein transmembrane region gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0420 Trad_0421 Trad_0421 Trad_0421 467527 468551 - pseudogene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0421 Trad_0422 Trad_0422 Trad_0422 468552 468680 - hypothetical protein KEGG: ate:Athe_2026 integrase family protein~SPTR: Q855R3 Gp50 gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0422 Trad_0423 Trad_0423 Trad_0423 468684 468992 - plasmid stabilization system InterPro IPR007712~KEGG: mar:MAE_07940 hypothetical protein~PFAM: plasmid stabilization system~SPTR: Q4C7V8 Plasmid stabilization system~PFAM: Plasmid stabilisation system protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0423 Trad_0424 Trad_0424 Trad_0424 468993 469337 - transcriptional regulator%2C XRE family InterPro IPR001387~KEGG: dge:Dgeo_2718 hypothetical protein~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Q1J2Y3 XRE-family like protein%2C component of toxin-antitoxin system~PFAM: Helix-turn-helix gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0424 Trad_0425 Trad_0425 Trad_0425 469490 469729 - hypothetical protein KEGG: cyh:Cyan8802_3582 cell envelope-related transcriptional attenuator~SPTR: C7QM94 Cell envelope-related transcriptional attenuator gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0425 Trad_0426 Trad_0426 Trad_0426 470028 470222 - YcfA family protein InterPro IPR012933~KEGG: tth:TTC1885 hypothetical protein~PFAM: YcfA family protein~SPTR: C1XMY5 YcfA-like protein~PFAM: YcfA-like protein gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0426 Trad_0427 Trad_0427 Trad_0427 470251 470493 - Domain of unknown function DUF1902 InterPro IPR015066~KEGG: ttj:TTHA1013 hypothetical protein~PFAM: Domain of unknown function DUF1902~SPTR: A0ZK26 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF1902) gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0427 Trad_0428 Trad_0428 Trad_0428 471667 471936 - CRISPR-associated protein Cas2 COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR003799~KEGG: tth:TT_P0101 hypothetical protein~PFAM: protein of unknown function DUF196~SPTR: C1XW87 CRISPR-associated protein Cas2~TIGRFAM: CRISPR-associated protein Cas2~PFAM: CRISPR associated protein Cas2~TIGRFAM: CRISPR-associated protein Cas2 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0428 Trad_0429 Trad_0429 Trad_0429 471957 472949 - CRISPR-associated protein Cas1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR018254:IPR002729~KEGG: ttj:TTHB145 hypothetical protein~PFAM: protein of unknown function DUF48~SPTR: C1XW88 CRISPR-associated protein Cas1~TIGRFAM: CRISPR-associated protein Cas1~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated protein Cas1 gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0429 Trad_0430 Trad_0430 Trad_0430 472954 474417 - CRISPR-associated protein%2C TIGR02710 family InterPro IPR014082~KEGG: tth:TT_P0107 hypothetical protein~PFAM: CRISPR-associated protein Cas02710~SPTR: B7A9Z0 CRISPR-associated protein%2C TIGR02710 family~TIGRFAM: CRISPR-associated protein%2C TIGR02710 family~PFAM: CRISPR-associated protein (Cas_Cas02710)~TIGRFAM: CRISPR-associated protein%2C TIGR02710 family gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0430 Trad_0431 Trad_0431 Trad_0431 474402 475607 - CRISPR-associated protein%2C TIGR02710 family InterPro IPR014082~KEGG: ttj:TTHB144 hypothetical protein~PFAM: CRISPR-associated protein Cas02710~SPTR: C1XW86 CRISPR-associated protein%2C TIGR02710 family~TIGRFAM: CRISPR-associated protein%2C TIGR02710 family~PFAM: CRISPR-associated protein (Cas_Cas02710)~TIGRFAM: CRISPR-associated protein%2C TIGR02710 family gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0431 Trad_0432 Trad_0432 Trad_0432 477309 478052 - CRISPR-associated protein Cas6 COGs: COG5551 conserved hypothetical protein~InterPro IPR019267:IPR010156~KEGG: tth:TTC1927 hypothetical protein~PFAM: Protein of unknown function DUF2276~SPTR: B7A9Z1 CRISPR-associated protein Cas6~TIGRFAM: CRISPR-associated protein Cas6~PFAM: Uncharacterized conserved protein (DUF2276)~TIGRFAM: CRISPR-associated protein Cas6 gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0432 Trad_0433 Trad_0433 Trad_0433 478075 479034 - hypothetical protein InterPro IPR008960:IPR015922~KEGG: ttj:TTHA0317 hypothetical protein~SPTR: C1XR88 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF2223) gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0433 Trad_0434 Trad_0434 Trad_0434 479036 480358 - protein of unknown function UPF0052 and CofD COGs: COG0391 conserved hypothetical protein~InterPro IPR002882:IPR010119~KEGG: dge:Dgeo_0722 hypothetical protein~PFAM: protein of unknown function UPF0052 and CofD~SPTR: B7A8D5 Putative uncharacterized protein~PFAM: Uncharacterised protein family UPF0052~TIGRFAM: conserved hypothetical protein%2C cofD-related gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0434 Trad_0435 Trad_0435 Trad_0435 480351 481274 - conserved hypothetical protein COGs: COG1660 P-loop-containing kinase~InterPro IPR005337~KEGG: ddr:Deide_09390 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: C1D1U3 UPF0042 nucleotide-binding protein Deide_09390~PFAM: P-loop ATPase protein family gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0435 Trad_0436 Trad_0436 Trad_0436 481324 481986 - Sporulation domain protein InterPro IPR007730~KEGG: mxa:MXAN_3502 adventurous gliding motility protein AgmI~PFAM: Sporulation domain protein~SPTR: Q1D6M7 Cell division protein~PFAM: Sporulation related domain gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0436 Trad_0437 Trad_0437 Trad_0437 482038 482691 - imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit COGs: COG0118 Glutamine amidotransferase~InterPro IPR000991:IPR016226:IPR017926:IPR010139~KEGG: dra:DR_0426 imidazole glycerol phosphate synthase subunit HisH~PFAM: glutamine amidotransferase class-I~SPTR: Q9RX89 Imidazole glycerol phosphate synthase subunit hisH~TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~PFAM: Glutamine amidotransferase class-I~TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0437 Trad_0438 Trad_0438 Trad_0438 482691 483290 - Imidazoleglycerol-phosphate dehydratase COGs: COG0131 Imidazoleglycerol-phosphate dehydratase~InterPro IPR020565:IPR000807:IPR020568~KEGG: dra:DR_0424 imidazoleglycerol-phosphate dehydratase~PFAM: imidazoleglycerol-phosphate dehydratase~PRIAM: Imidazoleglycerol-phosphate dehydratase~SPTR: Q9RX91 Imidazoleglycerol-phosphate dehydratase~PFAM: Imidazoleglycerol-phosphate dehydratase gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0438 Trad_0439 Trad_0439 Trad_0439 483283 484374 - histidinol-phosphate aminotransferase COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~InterProIPR001917:IPR004839:IPR015424:IPR015421:IPR 005861~KEGG: dge:Dgeo_0118 aminotransferase%2C class I and II~PFAM: aminotransferase class I and II~SPTR: Q1J263 Aminotransferase%2C class I and II~TIGRFAM: histidinol-phosphate aminotransferase~PFAM: Aminotransferase class I and II~TIGRFAM: histidinol-phosphate aminotransferase gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0439 Trad_0440 Trad_0440 Trad_0440 484465 486687 - Tetratricopeptide TPR_2 repeat protein InterProIPR013105:IPR001440:IPR019734:IPR013026:IPR 011990~KEGG: cyp:PCC8801_1300 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein~SPTR: B7K3M3 TPR repeat-containing protein~PFAM: Tetratricopeptide repeat gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0440 Trad_0441 Trad_0441 Trad_0441 486808 487215 - cytidine deaminase COGs: COG0295 Cytidine deaminase~InterPro IPR016192:IPR002125:IPR016193:IPR006262~KEGG: dge:Dgeo_1286 cytidine deaminase%2C homotetrameric~PFAM: CMP/dCMP deaminase zinc-binding~SPTR: Q1IYV2 Cytidine deaminase%2C homotetrameric~TIGRFAM: cytidine deaminase~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: cytidine deaminase%2C homotetrameric gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0441 Trad_0442 Trad_0442 Trad_0442 487236 487547 - diacylglycerol kinase COGs: COG0818 Diacylglycerol kinase~InterPro IPR000829~KEGG: dge:Dgeo_1274 diacylglycerol kinase~PFAM: diacylglycerol kinase~SPTR: Q1IYW4 Diacylglycerol kinase~PFAM: Prokaryotic diacylglycerol kinase gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0442 Trad_0443 Trad_0443 Trad_0443 487577 488020 - protein of unknown function UPF0054 COGs: COG0319 metal-dependent hydrolase~InterPro IPR020549:IPR002036~KEGG: dge:Dgeo_1273 hypothetical protein~PFAM: protein of unknown function UPF0054~SPTR: C1XQ66 Putative uncharacterized protein~PFAM: Uncharacterized protein family UPF0054~TIGRFAM: conserved hypothetical protein TIGR00043 gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0443 Trad_0444 Trad_0444 Trad_0444 487980 489953 - metal dependent phosphohydrolase COGs: COG1480 membrane-associated HD superfamily hydrolase~InterPro IPR006674:IPR006675:IPR003607~KEGG: aac:Aaci_1984 7TM receptor with intracellular metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: C8WY34 7TM receptor with intracellular metal dependent phosphohydrolase~TIGRFAM: metal dependent phophohydrolase~PFAM: 7TM-HD extracellular%3B HD domain%3B 7TM receptor with intracellular HD hydrolase~TIGRFAM: uncharacterized domain HDIG gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0444 Trad_0445 Trad_0445 Trad_0445 490119 491009 - PhoH family protein COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase~InterPro IPR003714~KEGG: tth:TTC0684 PhoH protein~PFAM: PhoH family protein~SPTR: C1XJH1 Phosphate starvation-inducible protein PhoH%2C predicted ATPase~manually curated~PFAM: PhoH-like protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0445 Trad_0446 Trad_0446 Trad_0446 491048 491602 - hypothetical protein KEGG: SH3%2C pleckstrin-like and PDZ/DHR/GLGF domain-containing protein~SPTR: A9UNP0 SH3%2C pleckstrin-like and PDZ/DHR/GLGF domain-containing protein gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0446 Trad_0447 Trad_0447 Trad_0447 491599 492576 - band 7 protein COGs: COG4864 conserved hypothetical protein~InterPro IPR001107~KEGG: ttj:TTHA1048 hypothetical protein~PFAM: band 7 protein~SPTR: Q72JT2 UPF0365 protein TT_C0686~PFAM: SigmaW regulon antibacterial gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0447 Trad_0448 Trad_0448 Trad_0448 492650 494170 - protein of unknown function DUF107 COGs: COG1030 Membrane-bound serine protease (ClpP class)~InterPro IPR002810~KEGG: tth:TTC0687 putative protease/transporter~PFAM: protein of unknown function DUF107~SPTR: C1XQ70 Membrane-bound serine protease (ClpP class)~PFAM: Clp protease%3B NfeD-like gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0448 Trad_0449 Trad_0449 Trad_0449 494367 494612 + hypothetical protein KEGG: swd:Swoo_4091 hypothetical protein~SPTR: B1KH35 Putative uncharacterized protein gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0449 Trad_0450 Trad_0450 Trad_0450 494629 494877 - hypothetical protein KEGG: hypothetical protein%3B K10601 E3 ubiquitin-protein ligase synoviolin~SPTR: C5M3H2 Putative uncharacterized protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0450 Trad_0451 Trad_0451 Trad_0451 494979 496493 - Carbohydrate kinase%2C FGGY COGs: COG1070 Sugar (pentulose and hexulose) kinase~InterPro IPR018483:IPR018484:IPR018485~KEGG: gka:GK1941 gluconokinase~PFAM: Carbohydrate kinase%2C FGGY-like~SPTR: Q5KYL0 Gluconokinase~PFAM: FGGY family of carbohydrate kinases%2C N-terminal domain%3B FGGY family of carbohydrate kinases%2C C-terminal domain gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0451 Trad_0452 Trad_0452 Trad_0452 496695 497369 + PKD domain containing protein InterPro IPR000601~KEGG: rbi:RB2501_13489 putative secreted protein~PFAM: PKD domain containing protein~SMART: PKD domain containing protein~SPTR: A4CKE5 Putative secreted protein~PFAM: PKD domain gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0452 Trad_0453 Trad_0453 Trad_0453 497547 498296 - acetylglutamate kinase COGs: COG0548 Acetylglutamate kinase~InterPro IPR001048:IPR011148:IPR004662~KEGG: dge:Dgeo_0079 acetylglutamate kinase~PFAM: aspartate/glutamate/uridylate kinase~PRIAM: Acetylglutamate kinase~SPTR: Q1J2A2 Acetylglutamate/acetylaminoadipate kinase~TIGRFAM: acetylglutamate kinase~PFAM: Amino acid kinase family~TIGRFAM: acetylglutamate kinase gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0453 Trad_0454 Trad_0454 Trad_0454 498385 499806 + Phosphoglucosamine mutase COGs: COG1109 Phosphomannomutase~InterProIPR016066:IPR005841:IPR005844:IPR005845:IPR 005846:IPR005843:IPR016055~KEGG: dra:DR_A0047 phospho-sugar mutase%2C putative~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase~PRIAM: Phosphoglucosamine mutase~SPTR: C1XTB1 Phosphomannomutase~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0454 Trad_0455 Trad_0455 Trad_0455 500091 500663 - chromosome segregation ATPase-like protein KEGG: rxy:Rxyl_0656 chromosome segregation ATPases-like protein~SPTR: A1CIS8 Putative uncharacterized protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0455 Trad_0456 Trad_0456 Trad_0456 500867 501931 - peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR001131:IPR001714:IPR000587:IPR000994~KEGG: ttj:TTHA1068 proline dipeptidase~PFAM: peptidase M24%3B creatinase~SPTR: Q5SJE6 Proline dipeptidase~PFAM: Metallopeptidase family M24%3B Creatinase/Prolidase N-terminal domain gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0456 Trad_0457 Trad_0457 Trad_0457 501925 502677 - triosephosphate isomerase COGs: COG0149 Triosephosphate isomerase~InterPro IPR020861:IPR000652:IPR013785~KEGG: pth:PTH_2721 triosephosphate isomerase~PFAM: triosephosphate isomerase~PRIAM: Triose-phosphate isomerase~SPTR: A5CYN7 Triosephosphate isomerase~TIGRFAM: triosephosphate isomerase~PFAM: Triosephosphate isomerase~TIGRFAM: triosephosphate isomerase gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0457 Trad_0458 Trad_0458 Trad_0458 502833 503144 - Bor family protein InterPro IPR010438~KEGG: eca:ECA2067 lipoprotein~PFAM: Bor family protein~SPTR: Q1ZW04 Putative uncharacterized protein~PFAM: Bor protein gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0458 Trad_0459 Trad_0459 Trad_0459 504067 506520 - ATP-dependent protease La COGs: COG0466 ATP-dependent Lon protease~InterProIPR001412:IPR001984:IPR003111:IPR003959:IPR 008269:IPR020568:IPR004815:IPR003593~KEGG: ttj:TTHA1111 alternative ATP-dependent protease La (Lon protease)~PFAM: peptidase S16 lon domain protein%3B AAA ATPase central domain protein~PRIAM: Endopeptidase La~SMART: peptidase S16 lon domain protein%3B AAA ATPase~SPTR: Q5SJA3 Alternative ATP-dependent protease La (Lon protease)~TIGRFAM: ATP-dependent protease La~PFAM: ATP-dependent protease La (LON) domain%3B ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: ATP-dependent protease La gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0459 Trad_0460 Trad_0460 Trad_0460 506973 508796 + arginyl-tRNA synthetase COGs: COG0018 Arginyl-tRNA synthetase~InterProIPR015945:IPR005148:IPR008909:IPR009080:IPR 014729:IPR001278~KEGG: dge:Dgeo_1036 arginyl-tRNA synthetase~PFAM: DALR anticodon binding domain protein%3B arginyl tRNA synthetase domain protein%3B Arginyl-tRNA synthetase%2C class Ic%2C core~PRIAM: Arginine--tRNA ligase~SPTR: Q1IZJ9 Arginyl-tRNA synthetase~TIGRFAM: arginyl-tRNA synthetase~PFAM: DALR anticodon binding domain%3B Arginyl tRNA synthetase N terminal domain%3B tRNA synthetases class I (R)~TIGRFAM: arginyl-tRNA synthetase gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0460 Trad_0461 Trad_0461 Trad_0461 508811 509284 - conserved hypothetical protein KEGG: rxy:Rxyl_0665 hypothetical protein~SPTR: C9Z019 PROBABLE TRANSMEMBRANE PROTEIN gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0461 Trad_0462 Trad_0462 Trad_0462 509476 510465 - von Willebrand factor type A InterPro IPR002035~KEGG: cya:CYA_2093 hypothetical protein~PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~SPTR: Q2JSY1 Putative uncharacterized protein~PFAM: von Willebrand factor type A domain gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0462 Trad_0463 Trad_0463 Trad_0463 510625 513645 - FAD linked oxidase domain protein COGs: COG0277 FAD/FMN-containing dehydrogenase~InterProIPR017900:IPR006094:IPR004113:IPR004017:IPR 017896:IPR016166:IPR016164:IPR009051:IPR016167~KEGG: rca:Rcas_0560 FAD linked oxidase domain-containing protein~PFAM: FAD linked oxidase domain protein%3B protein of unknown function DUF224 cysteine-rich region domain protein~SPTR: A7NGU3 FAD linked oxidase domain protein~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0463 Trad_0464 Trad_0464 Trad_0464 513936 515054 - transcriptional regulator%2C GntR family with LacI sensor COGs: COG1609 Transcriptional regulators~InterPro IPR000524:IPR001761:IPR011991~KEGG: gym:GYMC10_2719 transcriptional regulator%2C GntR family with LacI sensor~PFAM: regulatory protein GntR HTH%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein GntR HTH~SPTR: Q2RGW9 Transcriptional regulator%2C LacI family~manually curated~PFAM: Bacterial regulatory proteins%2C gntR family%3B family gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0464 Trad_0465 Trad_0465 Trad_0465 515314 516618 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006061:IPR006059~KEGG: bcv:Bcav_3000 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: C5BZR5 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0465 Trad_0466 Trad_0466 Trad_0466 516726 517625 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: bfa:Bfae_01240 permease component of ABC-type sugar transporter~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C7MFA6 Permease component of ABC-type sugar transporter~PFAM: Binding-protein-dependent transport system inner membrane component gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0466 Trad_0467 Trad_0467 Trad_0467 517625 518500 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: bfa:Bfae_01230 ABC-type sugar transport system%2C permease component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C7MFA5 ABC-type sugar transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0467 Trad_0468 Trad_0468 Trad_0468 518493 519083 - protein of unknown function DUF624 COGs: COG5578 integral membrane protein~InterPro IPR006938~KEGG: ttr:Tter_1502 protein of unknown function DUF624~PFAM: protein of unknown function DUF624~SPTR: D1CC93 Putative uncharacterized protein~PFAM: Protein of unknown function%2C DUF624 gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0468 Trad_0469 Trad_0469 Trad_0469 519165 522233 + Alpha-mannosidase COGs: COG0383 Alpha-mannosidase~InterPro IPR000602:IPR015341:IPR011682:IPR011330~KEGG: dsh:Dshi_3007 alpha-mannosidase~PFAM: glycosyl hydrolase 38 domain protein%3B glycoside hydrolase family 38%3B Glycoside hydrolase family 38 central region~PRIAM: Alpha-mannosidase~SPTR: A8LKF7 Alpha-mannosidase~PFAM: Glycosyl hydrolases family 38 C-terminal domain%3B Glycosyl hydrolases family 38 N-terminal domain%3B Alpha mannosidase%2C middle domain gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0469 Trad_0470 Trad_0470 Trad_0470 522303 523367 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: ttr:Tter_0652 oxidoreductase domain protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C1WS26 Predicted dehydrogenase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0470 Trad_0471 Trad_0471 Trad_0471 523405 523932 + hypothetical protein KEGG: bbe:BBR47_28730 peroxidase/catalase~SPTR: C0ZDJ1 Catalase-peroxidase gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0471 Trad_0472 Trad_0472 Trad_0472 524021 524623 + hypothetical protein KEGG: nml:Namu_0862 hypothetical protein~SPTR: C8XAA8 Putative uncharacterized protein gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0472 Trad_0473 Trad_0473 Trad_0473 524722 525330 + hypothetical protein KEGG: nml:Namu_0862 hypothetical protein~SPTR: C8XAA8 Putative uncharacterized protein gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0473 Trad_0474 Trad_0474 Trad_0474 525391 527568 - single-stranded-DNA-specific exonuclease RecJ COGs: COG0608 Single-stranded DNA-specific exonuclease~InterPro IPR001667:IPR003156:IPR004610~KEGG: dge:Dgeo_1599 single-stranded-DNA-specific exonuclease RecJ~PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~SPTR: Q1IXZ0 Single-stranded-DNA-specific exonuclease RecJ~TIGRFAM: single-stranded-DNA-specific exonuclease RecJ~PFAM: DHH family%3B DHHA1 domain~TIGRFAM: single-stranded-DNA-specific exonuclease RecJ gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0474 Trad_0475 Trad_0475 Trad_0475 527572 528015 - hypothetical protein KEGG: eli:ELI_07570 hypothetical protein~SPTR: A5P897 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF1049) gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0475 Trad_0476 Trad_0476 Trad_0476 528079 528981 - Tetratricopeptide TPR_2 repeat protein InterProIPR001440:IPR013105:IPR019734:IPR013026:IPR 011990~KEGG: dge:Dgeo_2293 tetratricopeptide TPR_2~PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein~SPTR: Q1IVZ7 Tetratricopeptide TPR_2~PFAM: Tetratricopeptide repeat gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0476 Trad_0477 Trad_0477 Trad_0477 529298 530236 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439:IPR003593~KEGG: scl:sce0659 sodium ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: A9EN41 Sodium ABC transporter ATP-binding protein~PFAM: ABC transporter gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0477 Trad_0478 Trad_0478 Trad_0478 530214 530969 + ABC-2 type transporter InterPro IPR013526:IPR013525~KEGG: tte:TTE1177 ABC-type multidrug transport system%2C permease component~PFAM: ABC-2 type transporter~SPTR: Q8R6H7 ABC-type multidrug transport system%2C permease component~PFAM: ABC-2 type transporter gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0478 Trad_0479 Trad_0479 Trad_0479 530966 531547 - non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family COGs: COG0127 Xanthosine triphosphate pyrophosphatase~InterPro IPR002637~KEGG: ttj:TTHA1654 nucleoside-triphosphatase (HAM1 protein)~PFAM: Ham1 family protein~SPTR: A1HQF7 Nucleoside-triphosphatase~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family~PFAM: Ham1 family~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0479 Trad_0480 Trad_0480 Trad_0480 531544 532254 - ribonuclease PH COGs: COG0689 RNase PH~InterPro IPR001247:IPR015847:IPR020568:IPR002381~KEGG: dge:Dgeo_2086 ribonuclease PH~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2~PRIAM: tRNA nucleotidyltransferase~SPTR: Q1IWK4 Ribonuclease PH~TIGRFAM: ribonuclease PH~PFAM: 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2~TIGRFAM: ribonuclease PH gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0480 Trad_0481 Trad_0481 Trad_0481 532363 533175 - glutamate racemase COGs: COG0796 Glutamate racemase~InterPro IPR018187:IPR015942:IPR001920:IPR004391~KEGG: tth:TTC1280 glutamate racemase~PFAM: Asp/Glu/hydantoin racemase~PRIAM: Glutamate racemase~SPTR: Q72I52 Glutamate racemase~TIGRFAM: glutamate racemase~PFAM: Asp/Glu/Hydantoin racemase~TIGRFAM: glutamate racemase gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0481 Trad_0482 Trad_0482 Trad_0482 533222 533503 - hypothetical protein KEGG: SORBIDRAFT_04g035660%3B hypothetical protein~SPTR: C5XUD5 Putative uncharacterized protein Sb04g035660 gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0482 Trad_0483 Trad_0483 Trad_0483 533698 536073 + ribonuclease R COGs: COG0557 Exoribonuclease R~InterProIPR001900:IPR013223:IPR003029:IPR016027:IPR 012340:IPR011805:IPR004476:IPR011129~KEGG: ddr:Deide_03240 putative ribonuclease R%2C (RNase R)~PFAM: ribonuclease II%3B Ribonuclease B OB region domain%3B RNA binding S1 domain protein~SMART: Cold shock protein~SPTR: C1CZA7 Putative Ribonuclease R%2C (RNase R)~TIGRFAM: ribonuclease R%3B VacB and RNase II family 3'-5' exoribonuclease~PFAM: Ribonuclease B OB domain%3B RNB domain%3B S1 RNA binding domain~TIGRFAM: ribonuclease R%3B VacB and RNase II family 3'-5' exoribonucleases gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0483 Trad_0484 Trad_0484 Trad_0484 536288 537586 + hypothetical protein KEGG: tth:TTC0207 hypothetical protein~SPTR: C1XKD7 Putative uncharacterized protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0484 Trad_0485 Trad_0485 Trad_0485 537591 540674 - carbamoyl-phosphate synthase%2C large subunit COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)~InterProIPR005479:IPR005483:IPR005481:IPR005480:IPR 011761:IPR016185:IPR013817:IPR013816:IPR006275~KEGG: dge:Dgeo_2070 carbamoyl phosphate synthase large subunit~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B Carbamoyl-phosphate synthetase large chain oligomerisation~SPTR: Q1IWM0 Carbamoyl-phosphate synthase large chain~TIGRFAM: carbamoyl-phosphate synthase%2C large subunit~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B Carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain~TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type%3B carbamoyl-phosphate synthase%2C large subunit gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0485 Trad_0486 Trad_0486 Trad_0486 540799 541338 + protein of unknown function DUF820 InterPro IPR008538:IPR012296~KEGG: mar:MAE_46710 hypothetical protein~PFAM: protein of unknown function DUF820~SPTR: B0JUP5 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF820) gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0486 Trad_0487 Trad_0487 Trad_0487 541321 541572 - RNA-binding S4 domain protein COGs: COG2501 conserved hypothetical protein~InterPro IPR002942~KEGG: cyb:CYB_1892 S4 domain-containing protein~PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Q2JKE2 S4 domain protein~PFAM: S4 domain gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0487 Trad_0488 Trad_0488 Trad_0488 541569 542426 - Prephenate dehydratase COGs: COG0077 Prephenate dehydratase~InterPro IPR018528:IPR001086:IPR002912~KEGG: ttj:TTHA1104 prephenate dehydratase~PFAM: prephenate dehydratase%3B amino acid-binding ACT domain protein~PRIAM: Prephenate dehydratase~SPTR: Q5SJB0 Prephenate dehydratase~PFAM: Prephenate dehydratase gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0488 Trad_0489 Trad_0489 Trad_0489 542454 543092 - NmrA family protein COGs: COG2910 Putative NADH-flavin reductase~InterPro IPR008030:IPR016040~KEGG: fal:FRAAL4004 putative nucleoside-diphosphate-sugar epimerases~PFAM: NmrA family protein~SPTR: C1XST4 Putative NADH-flavin reductase~PFAM: NmrA-like family gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0489 Trad_0490 Trad_0490 Trad_0490 543344 543727 - ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: ttj:TTHA1292 metal uptake regulation protein%2C putative~PFAM: ferric-uptake regulator~SPTR: Q72J54 Ferric uptake regulation protein~PFAM: Ferric uptake regulator family gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0490 Trad_0491 Trad_0491 Trad_0491 543911 544078 + ribosomal protein L33 InterPro IPR018264:IPR001705~KEGG: dra:DR_2049 50S ribosomal protein L33~PFAM: ribosomal protein L33~SPTR: Q9RSS4 50S ribosomal protein L33~TIGRFAM: ribosomal protein L33~PFAM: Ribosomal protein L33~TIGRFAM: ribosomal protein L33%2C bacterial type gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0491 Trad_0492 Trad_0492 Trad_0492 544084 544422 - hypothetical protein KEGG: similar to DNA helicase homolog%2C putative~SPTR: A8P8J6 Putative uncharacterized protein gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0492 Trad_0493 Trad_0493 Trad_0493 544435 545499 + conserved hypothetical protein InterPro IPR011048~KEGG: mes:Meso_4007 hypothetical protein~SPTR: C1XGI5 Putative uncharacterized protein gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0493 Trad_0494 Trad_0494 Trad_0494 545519 546811 + hypothetical protein InterPro IPR000815~KEGG: cyn:Cyan7425_1918 hypothetical protein~SPTR: B8HT58 Putative uncharacterized protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0494 Trad_0495 Trad_0495 Trad_0495 546823 547092 + ribosomal protein S14 COGs: COG0199 Ribosomal protein S14~InterPro IPR018271:IPR001209~KEGG: dra:DR_2109 ribosomal protein S14~PFAM: ribosomal protein S14~SPTR: A3XJV8 Ribosomal protein S14~PFAM: Ribosomal protein S14p/S29e gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0495 Trad_0496 Trad_0496 Trad_0496 547137 547475 - conserved hypothetical protein KEGG: aeh:Mlg_1777 hypothetical protein~SPTR: Q0A7R4 Putative uncharacterized protein gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0496 Trad_0497 Trad_0497 Trad_0497 547747 549015 + Kelch repeat-containing protein InterPro IPR006652:IPR011043:IPR015915~KEGG: xcb:XC_4204 ring canal kelch-like protein~PFAM: Kelch repeat-containing protein~SPTR: C1XWE6 Uncharacterized conserved protein~PFAM: Kelch motif gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0497 Trad_0498 Trad_0498 Trad_0498 549081 550085 + glucose sorbosone dehydrogenase COGs: COG2133 Glucose/sorbosone dehydrogenase~InterPro IPR012938:IPR011041:IPR011042~KEGG: hau:Haur_0421 glucose sorbosone dehydrogenase~PFAM: glucose sorbosone dehydrogenase~SPTR: A9AUF3 Glucose sorbosone dehydrogenase~PFAM: Glucose / Sorbosone dehydrogenase gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0498 Trad_0499 Trad_0499 Trad_0499 550036 550362 - glutaredoxin InterPro IPR002109:IPR012336:IPR012335~KEGG: tth:TTC1680 hypothetical protein~PFAM: glutaredoxin~SPTR: Q72H15 Putative uncharacterized protein~PFAM: Glutaredoxin gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0499 Trad_0500 Trad_0500 Trad_0500 550359 551279 - 1-phosphofructokinase COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)~InterPro IPR008265:IPR002139:IPR011611:IPR017583~KEGG: mxa:MXAN_2372 6-phosphofructokinase~PFAM: PfkB domain protein~SPTR: Q1D9T1 6-phosphofructokinase~TIGRFAM: 1-phosphofructokinase~PFAM: pfkB family carbohydrate kinase~TIGRFAM: 1-phosphofructokinase gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0500 Trad_0501 Trad_0501 Trad_0501 551284 551553 - conserved hypothetical protein KEGG: dra:DR_0202 hypothetical protein~SPTR: Q9RXV4 Putative uncharacterized protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0501 Trad_0502 Trad_0502 Trad_0502 551568 552488 - peptidase T2 asparaginase 2 COGs: COG1446 Asparaginase~InterPro IPR000246~KEGG: azc:AZC_2990 aspartylglucosaminidase family protein~PFAM: peptidase T2 asparaginase 2~SPTR: A8IDT5 Aspartylglucosaminidase family protein~PFAM: Asparaginase gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0502 Trad_0503 Trad_0503 Trad_0503 552616 553176 + Septum formation inhibitor MinC COGs: COG0850 Septum formation inhibitor~InterPro IPR005526:IPR016098~KEGG: dge:Dgeo_0673 septum formation inhibitor MinC~PFAM: Septum formation inhibitor MinC~SPTR: C1XI01 Septum formation inhibitor~PFAM: Septum formation inhibitor MinC%2C C-terminal domain~TIGRFAM: septum site-determining protein MinC gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0503 Trad_0504 Trad_0504 Trad_0504 553436 554209 - Methyltransferase type 11 InterPro IPR013216~KEGG: cmu:TC0410 hypothetical protein~PFAM: Methyltransferase type 11~SPTR: Q9PKQ5 Putative uncharacterized protein~PFAM: Methyltransferase domain gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0504 Trad_0505 Trad_0505 Trad_0505 554764 556635 + ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR017871:IPR001140:IPR003439:IPR017940:IPR 011527:IPR003593~KEGG: gvi:glr2719 HlyB/MsbA family ABC transporter~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: Q7NH18 HlyB/MsbA family ABC transporter~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0505 Trad_0506 Trad_0506 Trad_0506 556632 558455 + ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR001140:IPR003439:IPR017940:IPR011527:IPR 003593~KEGG: dra:DR_0095 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: Q9RY55 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0506 Trad_0507 Trad_0507 Trad_0507 558533 560299 - para-aminobenzoate synthase%2C subunit I COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I~InterProIPR019999:IPR015890:IPR001544:IPR005801:IPR 005802~KEGG: hau:Haur_2989 para-aminobenzoate synthase%2C subunit I~PFAM: Chorismate binding-like%3B aminotransferase class IV~SPTR: A9B3Q5 Para-aminobenzoate synthase%2C subunit I~TIGRFAM: para-aminobenzoate synthase%2C subunit I~manually curated~PFAM: Aminotransferase class IV%3B chorismate binding enzyme~TIGRFAM: aminodeoxychorismate synthase%2C component I%2C bacterial clade gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0507 Trad_0508 Trad_0508 Trad_0508 560316 561389 + Threonine aldolase COGs: COG2008 Threonine aldolase~InterPro IPR001597:IPR015424:IPR015421:IPR015422~KEGG: dge:Dgeo_1451 threonine aldolase~PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase~PRIAM: Threonine aldolase~SPTR: Q1IYD8 Threonine aldolase~manually curated~PFAM: Beta-eliminating lyase gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0508 Trad_0509 Trad_0509 Trad_0509 561386 562216 + shikimate 5-dehydrogenase COGs: COG0169 Shikimate 5-dehydrogenase~InterPro IPR013708:IPR006151:IPR016040:IPR011342~KEGG: mta:Moth_1558 shikimate dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain protein%3B Shikimate/quinate 5-dehydrogenase~SPTR: Q2RI72 Shikimate dehydrogenase~TIGRFAM: shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain%3B Shikimate / quinate 5-dehydrogenase~TIGRFAM: shikimate 5-dehydrogenase gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0509 Trad_0510 Trad_0510 Trad_0510 562957 563937 + hypothetical protein KEGG: pth:PTH_1110 hypothetical protein~SPTR: A5D390 Putative uncharacterized protein gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0510 Trad_0511 Trad_0511 Trad_0511 564291 565160 - metallophosphoesterase COGs: COG1408 phosphohydrolase~InterPro IPR004843~KEGG: gym:GYMC10_5433 metallophosphoesterase~PFAM: metallophosphoesterase~SPTR: A3IRX3 Metallophosphoesterase~PFAM: Calcineurin-like phosphoesterase gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0511 Trad_0512 Trad_0512 Trad_0512 565411 567456 + PKD domain containing protein InterPro IPR000601~KEGG: afw:Anae109_3722 hypothetical protein~PFAM: PKD domain containing protein~SMART: PKD domain containing protein~SPTR: A7BMA0 Putative uncharacterized protein~PFAM: PKD domain~TIGRFAM: Listeria/Bacterioides repeat gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0512 Trad_0513 Trad_0513 Trad_0513 567608 569140 + methylmalonyl-CoA mutase%2C large subunit COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit~InterPro IPR006099:IPR016176:IPR014348:IPR006098~KEGG: ttj:TTHA1246 methylmalonyl-CoA mutase~PFAM: methylmalonyl-CoA mutase~PRIAM: Methylmalonyl-CoA mutase~SPTR: C1XUL4 Methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: Methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase N-terminal domain gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0513 Trad_0514 Trad_0514 Trad_0514 569137 570174 - conserved hypothetical protein KEGG: cyn:Cyan7425_2704 hypothetical protein~SPTR: A0YZW3 Putative uncharacterized protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0514 Trad_0515 Trad_0515 Trad_0515 570171 570872 - hypothetical protein KEGG: cyn:Cyan7425_2703 hypothetical protein~SPTR: A0YKD4 Putative uncharacterized protein gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0515 Trad_0516 Trad_0516 Trad_0516 571113 572222 + transcriptional regulator%2C SARP family COGs: COG3629 DNA-binding transcriptional activator of the SARP family~InterPro IPR005158~KEGG: bpy:Bphyt_5093 transcriptional regulator%2C SARP family~PFAM: transcriptional activator domain~SPTR: C1XWT8 Predicted ATPase%2C COG3903~PFAM: Bacterial transcriptional activator domain gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0516 Trad_0517 Trad_0517 Trad_0517 572497 572703 + conserved hypothetical protein KEGG: mul:MUL_4696 hypothetical protein~SPTR: A0PWA9 Conserved hypothetical membrane protein gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0517 Trad_0518 Trad_0518 Trad_0518 573036 573899 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: mno:Mnod_6872 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: B8IHF4 Glycosyl transferase family 2~PFAM: Glycosyl transferase family 2 gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0518 Trad_0519 Trad_0519 Trad_0519 573962 576310 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: fal:FRAAL6119 putative succinoglycan biosynthesis protein~PFAM: glycosyl transferase family 2~SPTR: Q0RCT1 Putative succinoglycan biosynthesis protein~PFAM: Glycosyl transferase family 2 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0519 Trad_0520 Trad_0520 Trad_0520 576307 577143 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509:IPR011330~KEGG: sro:Sros_7657 putative polysaccharide deacetylase~PFAM: polysaccharide deacetylase~SPTR: C4EF42 Predicted xylanase/chitin deacetylase~PFAM: Polysaccharide deacetylase gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0520 Trad_0521 Trad_0521 Trad_0521 577136 578245 + hypothetical protein InterPro IPR016181~KEGG: chl:Chy400_0903 hypothetical protein~SPTR: B9LL46 Putative uncharacterized protein gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0521 Trad_0522 Trad_0522 Trad_0522 578368 579672 + membrane protein involved in the export of O-antigen and teichoic acid-like protein KEGG: sro:Sros_7658 membrane protein involved in the export of O-antigen and teichoic acid-like protein~SPTR: C4EF43 Membrane protein involved in the export of O-antigen and teichoic acid~PFAM: Polysaccharide biosynthesis protein gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0522 Trad_0523 Trad_0523 Trad_0523 579803 581656 + glycosyltransferase probably involved in cell wall biogenesis-like protein KEGG: sro:Sros_7666 glycosyltransferase probably involved in cell wall biogenesis-like protein~SPTR: C4EQ28 Glycosyl transferase gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0523 Trad_0524 Trad_0524 Trad_0524 581653 583161 + hypothetical protein KEGG: eba:ebA6086 transposase (IS4)~SPTR: Q5NZV5 Transposase (IS4) gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0524 Trad_0525 Trad_0525 Trad_0525 583302 583460 + hypothetical protein KEGG: hmo:HM1_1134 O-antigen polymerase%2C putative gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0525 Trad_0526 Trad_0526 Trad_0526 583472 584851 - hypothetical protein InterPro IPR011050~KEGG: mno:Mnod_6850 hemolysin-type calcium-binding region~SPTR: C4DSP9 Putative uncharacterized protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0526 Trad_0527 Trad_0527 Trad_0527 584936 585658 - CDP-alcohol phosphatidyltransferase COGs: COG1183 Phosphatidylserine synthase~InterPro IPR000462~KEGG: rba:RB4506 phosphatidylcholine synthase~PFAM: CDP-alcohol phosphatidyltransferase~SPTR: C1WTX6 Phosphatidylserine synthase gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0527 Trad_0528 Trad_0528 Trad_0528 585715 585891 - hypothetical protein KEGG: vap:Vapar_2209 hypothetical protein~SPTR: C5CXI8 Putative uncharacterized protein gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0528 Trad_0529 Trad_0529 Trad_0529 585957 586826 + metallophosphoesterase InterPro IPR004843:IPR011152~KEGG: dge:Dgeo_1656 metallophosphoesterase~PFAM: metallophosphoesterase~SPTR: Q1IXT3 Metallophosphoesterase~PFAM: Calcineurin-like phosphoesterase gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0529 Trad_0530 Trad_0530 Trad_0530 587277 587744 - Disulfide bond formation protein DsbB COGs: COG1495 Disulfide bond formation protein DsbB~InterPro IPR003752:IPR012187~KEGG: eat:EAT1b_2543 disulphide bond formation protein DsbB~PFAM: Disulphide bond formation protein DsbB~SPTR: C4L3W6 Disulphide bond formation protein DsbB~PFAM: Disulfide bond formation protein DsbB gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0530 Trad_0531 Trad_0531 Trad_0531 587854 588525 - DSBA oxidoreductase COGs: COG1651 Protein-disulfide isomerase~InterPro IPR001853:IPR012336:IPR012335~KEGG: dge:Dgeo_0692 DsbA oxidoreductase~PFAM: DSBA oxidoreductase~SPTR: Q1J0J0 DSBA oxidoreductase~PFAM: DSBA-like thioredoxin domain gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0531 Trad_0532 Trad_0532 Trad_0532 588600 588824 - Heavy metal transport/detoxification protein InterPro IPR017969:IPR006121~KEGG: dra:DR_2452 hypothetical protein~PFAM: Heavy metal transport/detoxification protein~SPTR: B7A607 Heavy metal transport/detoxification protein~PFAM: Heavy-metal-associated domain gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0532 Trad_0533 Trad_0533 Trad_0533 589091 589480 + protein of unknown function DUF326 InterPro IPR005560~KEGG: kse:Ksed_22530 protein of unknown function (DUF326)~PFAM: protein of unknown function DUF326~SPTR: C7NLY5 Putative uncharacterized protein gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0533 Trad_0534 Trad_0534 Trad_0534 589548 589907 + protein of unknown function DUF1622 COGs: COG4828 membrane protein~InterPro IPR012427~KEGG: mea:Mex_1p1854 hypothetical protein~PFAM: protein of unknown function DUF1622~SPTR: C5B1R0 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF1622) gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0534 Trad_0535 Trad_0535 Trad_0535 589946 590506 - hypothetical protein KEGG: hau:Haur_3008 hypothetical protein~SPTR: A9B4S3 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3105) gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0535 Trad_0536 Trad_0536 Trad_0536 590788 591777 + quinone oxidoreductase%2C YhdH/YhfP family COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase~InterProIPR013154:IPR013149:IPR011032:IPR016040:IPR 014188~KEGG: amc:MADE_01969 alcohol dehydrogenase%2C zinc-containing~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~SPTR: B4RZ07 Alcohol dehydrogenase%2C zinc-containing~TIGRFAM: quinone oxidoreductase%2C YhdH/YhfP family~PFAM: Zinc-binding dehydrogenase~TIGRFAM: putative quinone oxidoreductase%2C YhdH/YhfP family gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0536 Trad_0537 Trad_0537 Trad_0537 591785 592342 - MOSC domain containing protein COGs: COG2258 conserved hypothetical protein~InterPro IPR005302:IPR011037~KEGG: dra:DR_0273 hypothetical protein~PFAM: MOSC domain containing protein~SPTR: Q9RXN7 Putative uncharacterized protein~PFAM: MOSC domain gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0537 Trad_0538 Trad_0538 Trad_0538 592460 592969 + Appr-1-p processing domain protein COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1~InterPro IPR002589~KEGG: vap:Vapar_1354 Appr-1-p processing domain protein~PFAM: Appr-1-p processing domain protein~SMART: Appr-1-p processing domain protein~SPTR: C5CRS3 Appr-1-p processing domain protein~PFAM: Macro domain gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0538 Trad_0539 Trad_0539 Trad_0539 593105 595471 + peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209:IPR013784~KEGG: ttj:TTHA1868 extracellular serine protease~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~SPTR: C1XI07 Subtilisin-like serine protease~PFAM: Uncharacterized protein conserved in bacteria (DUF2141)%3B Subtilase family gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0539 Trad_0540 Trad_0540 Trad_0540 595601 596197 + Superoxide dismutase COGs: COG0605 Superoxide dismutase~InterPro IPR019833:IPR001189:IPR019831:IPR019832~KEGG: gwc:GWCH70_2392 superoxide dismutase~PFAM: Manganese/iron superoxide dismutase-like~PRIAM: Superoxide dismutase~SPTR: C5D4P7 Superoxide dismutase~PFAM: Iron/manganese superoxide dismutases%2C alpha-hairpin domain%3B Iron/manganese superoxide dismutases%2C C-terminal domain gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0540 Trad_0541 Trad_0541 Trad_0541 596438 599035 + Endonuclease/exonuclease/phosphatase COGs: COG2374 extracellular nuclease~InterPro IPR005135~KEGG: rrs:RoseRS_2828 endonuclease/exonuclease/phosphatase~PFAM: Endonuclease/exonuclease/phosphatase~SPTR: C1XXA5 Predicted extracellular nuclease~PFAM: Endonuclease/Exonuclease/phosphatase family gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0541 Trad_0542 Trad_0542 Trad_0542 600717 601145 + transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: plu:plu4843 IS200 family transposase~PFAM: transposase IS200-family protein~SPTR: Q7M7F4 Transposase%2C IS200 Familly~PFAM: Transposase IS200 like gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0542 Trad_0543 Trad_0543 Trad_0543 601231 601626 + hypothetical protein KEGG: hypothetical protein %3B K11374 elongator complex protein 2~SPTR: Q22KQ7 Putative uncharacterized protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0543 Trad_0544 Trad_0544 Trad_0544 602109 602774 + hypothetical protein KEGG: dge:Dgeo_1228 hypothetical protein~SPTR: Q1IZ10 Putative uncharacterized protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0544 Trad_0545 Trad_0545 Trad_0545 603448 603603 + hypothetical protein KEGG: hypothetical protein~SPTR: Q5KBV1 2%2C4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase%2C putative gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0545 Trad_0546 Trad_0546 Trad_0546 603603 603809 + hypothetical protein KEGG: similar to F15D4.7~SPTR: A5BJH6 Putative uncharacterized protein gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0546 Trad_0547 Trad_0547 Trad_0547 603809 604204 + transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: dge:Dgeo_2273 transposase IS200-like protein~PFAM: transposase IS200-family protein~SPTR: C1XYM9 Transposase~PFAM: Transposase IS200 like gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0547 Trad_0548 Trad_0548 Trad_0548 604204 605403 + transposase%2C IS605 OrfB family COGs: COG0675 Transposase and inactivated derivatives~InterPro IPR001959:IPR010095~KEGG: dge:Dgeo_2272 putative transposase%2C IS891/IS1136/IS1341~PFAM: putative transposase IS891/IS1136/IS1341 family%3B transposase IS605 OrfB~SPTR: C1XTD3 Transposase%2C IS605 OrfB family%2C central region~TIGRFAM: transposase%2C IS605 OrfB family~PFAM: Helix-turn-helix domain%3B Putative transposase DNA-binding domain%3B Probable transposase~TIGRFAM: transposase%2C IS605 OrfB family%2C central region gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0548 Trad_0549 Trad_0549 Trad_0549 605430 605930 + Soluble ligand binding domain protein COGs: COG1555 DNA uptake protein and related DNA-binding protein~InterPro IPR019554~KEGG: bfa:Bfae_17420 competence protein ComEA-like protein with helix-hairpin-helix repeat region~PFAM: Soluble ligand binding domain~SPTR: C7MDA6 Competence protein ComEA-like protein with helix-hairpin-helix repeat region~PFAM: SLBB domain~TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region%3B comEA protein gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0549 Trad_0550 Trad_0550 Trad_0550 605930 608320 + DNA internalization-related competence protein ComEC/Rec2 COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily)~InterPro IPR004477:IPR004797~KEGG: dge:Dgeo_1579 DNA internalization-related competence protein ComEC/Rec2~PFAM: ComEC/Rec2-related protein~SPTR: Q1IY10 DNA internalization-related competence protein ComEC/Rec2~TIGRFAM: DNA internalization-related competence protein ComEC/Rec2%3B ComEC/Rec2-related protein~PFAM: Competence protein%3B Metallo-beta-lactamase superfamily~TIGRFAM: ComEC/Rec2-related protein%3B DNA internalization-related competence protein ComEC/Rec2 gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0550 Trad_0551 Trad_0551 Trad_0551 608428 609180 + serine/threonine protein kinase COGs: COG0515 Serine/threonine protein kinase~InterProIPR008271:IPR017442:IPR000719:IPR011009:IPR 020635:IPR002290~KEGG: dge:Dgeo_0744 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C subgroup%2C catalytic domain~SPTR: Q1J0D8 Serine/threonine protein kinase~PFAM: Protein kinase domain gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0551 Trad_0552 Trad_0552 Trad_0552 609177 610115 + DNA polymerase III%2C delta subunit COGs: COG1466 DNA polymerase III delta subunit~InterPro IPR010372:IPR008921:IPR005790~KEGG: dge:Dgeo_0745 DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III delta~SPTR: Q1J0D7 DNA polymerase III%2C delta subunit~TIGRFAM: DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III subunits gamma and tau domain III%3B DNA polymerase III%2C delta subunit~TIGRFAM: DNA polymerase III%2C delta subunit gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0552 Trad_0553 Trad_0553 Trad_0553 610317 611249 + LAO/AO transport system ATPase COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family~InterPro IPR005129:IPR003593~KEGG: ttj:TTHA0136 LAO/AO transport system kinase~PFAM: ArgK protein~SMART: AAA ATPase~SPTR: Q5SM07 LAO/AO transport system kinase~TIGRFAM: LAO/AO transport system ATPase~PFAM: ArgK protein~TIGRFAM: LAO/AO transport system ATPase gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0553 Trad_0554 Trad_0554 Trad_0554 611246 611737 + pantetheine-phosphate adenylyltransferase COGs: COG0669 Phosphopantetheine adenylyltransferase~InterPro IPR001980:IPR004820:IPR014729:IPR004821~KEGG: ttj:TTHA0929 phosphopantetheine adenylyltransferase~PFAM: cytidylyltransferase~PRIAM: Pantetheine-phosphate adenylyltransferase~SPTR: B7A7F1 Pantetheine-phosphate adenylyltransferase~TIGRFAM: pantetheine-phosphate adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: Cytidylyltransferase~TIGRFAM: pantetheine-phosphate adenylyltransferase%2C bacterial%3B cytidyltransferase-related domain gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0554 Trad_0555 Trad_0555 Trad_0555 611921 612916 + Hsp33 protein COGs: COG1281 Disulfide bond chaperones of the HSP33 family~InterPro IPR000397:IPR016153:IPR016154~KEGG: ttj:TTHA0894 chaperonin HSP33~PFAM: Hsp33 protein~SPTR: Q5SJV8 33 kDa chaperonin~PFAM: Hsp33 protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0555 Trad_0556 Trad_0556 Trad_0556 612938 613234 - pseudogene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0556 Trad_0557 Trad_0557 Trad_0557 613364 614860 - Alkaline phosphatase COGs: COG1785 Alkaline phosphatase~InterProIPR001952:IPR017909:IPR017850:IPR017849:IPR 006311~KEGG: ttj:TTHB067 alkaline phosphatase~PFAM: Alkaline phosphatase~SMART: Alkaline phosphatase~SPTR: Q9RA56 Alkaline phosphatase~PFAM: Alkaline phosphatase%3B TAT (twin-arginine translocation) pathway signal sequence~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0557 Trad_0558 Trad_0558 Trad_0558 614960 615919 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: det:DET1056 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: Q3Z7M8 Membrane protein%2C putative~PFAM: EamA-like transporter family gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0558 Trad_0559 Trad_0559 Trad_0559 615990 616664 - LmbE family protein COGs: COG2120 conserved hypothetical protein LmbE homologs~InterPro IPR003737~KEGG: ttj:TTHA1200 hypothetical protein~PFAM: LmbE family protein~SPTR: Q5SJ14 Putative uncharacterized protein TTHA1200~PFAM: GlcNAc-PI de-N-acetylase gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0559 Trad_0560 Trad_0560 Trad_0560 616657 617289 - protein of unknown function DUF205 COGs: COG0344 membrane protein~InterPro IPR003811:IPR020788~KEGG: dge:Dgeo_1788 hypothetical protein~PFAM: protein of unknown function DUF205~SPTR: Q1IXF1 UPF0078 membrane protein Dgeo_1788~PFAM: Domain of unknown function (DUF205)~TIGRFAM: conserved hypothetical integral membrane protein TIGR00023 gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0560 Trad_0561 Trad_0561 Trad_0561 617535 619088 + Rhomboid family protein COGs: COG0705 membrane protein~InterPro IPR002610~KEGG: dar:Daro_2385 rhomboid-like protein~PFAM: Rhomboid family protein~SPTR: C9YFT2 Putative uncharacterized protein~PFAM: Rhomboid family gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0561 Trad_0562 Trad_0562 Trad_0562 619194 619877 + channel protein%2C hemolysin III family COGs: COG1272 membrane protein hemolysin III homolog~InterPro IPR004254:IPR005744~KEGG: dat:HRM2_17730 channel protein (hemolysin III family protein)~PFAM: Hly-III family protein~SPTR: C0QB78 Channel protein (Hemolysin III family protein)~TIGRFAM: channel protein%2C hemolysin III family~PFAM: Haemolysin-III related~TIGRFAM: channel protein%2C hemolysin III family gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0562 Trad_0563 Trad_0563 Trad_0563 619883 620602 + Protein of unknown function DUF2071 COGs: COG3361 conserved hypothetical protein~InterPro IPR018644~KEGG: aca:ACP_3305 hypothetical protein~PFAM: Protein of unknown function DUF2071~SPTR: A6FXZ0 Putative uncharacterized protein~manually curated~PFAM: Uncharacterized conserved protein (COG2071) gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0563 Trad_0564 Trad_0564 Trad_0564 620660 621247 + protein of unknown function DUF71 ATP-binding region COGs: COG2102 ATPase of PP-loop superfamily~InterPro IPR002761:IPR014729~KEGG: sru:SRU_1316 domain of unknown function%2C putative~PFAM: protein of unknown function DUF71 ATP-binding region~SPTR: A6G4P9 Putative uncharacterized protein~PFAM: ATP-binding region gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0564 Trad_0565 Trad_0565 Trad_0565 621244 622065 - Ion transport protein InterPro IPR003091:IPR005821~KEGG: rmr:Rmar_0040 ion transport protein~PFAM: Ion transport protein~SPTR: D0MK36 Ion transport protein~PFAM: Ion transport protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0565 Trad_0566 Trad_0566 Trad_0566 622168 622560 + conserved hypothetical protein KEGG: drt:Dret_0940 hypothetical protein~SPTR: C8X1D1 Putative uncharacterized protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0566 Trad_0567 Trad_0567 Trad_0567 624529 625281 + protein of unknown function DUF34 COGs: COG0327 conserved hypothetical protein~InterPro IPR002678~KEGG: dra:DR_0110 hypothetical protein~PFAM: protein of unknown function DUF34~SPTR: Q9RY41 UPF0135 protein DR_0110~PFAM: NIF3 (NGG1p interacting factor 3)~TIGRFAM: conserved hypothetical protein TIGR00486 gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0567 Trad_0568 Trad_0568 Trad_0568 625278 625931 + thymidylate kinase COGs: COG0125 Thymidylate kinase~InterPro IPR000062:IPR018094~KEGG: dge:Dgeo_1983 thymidylate kinase~PFAM: thymidylate kinase~PRIAM: dTMP kinase~SPTR: Q1IWV7 Thymidylate kinase~TIGRFAM: thymidylate kinase~PFAM: Thymidylate kinase~TIGRFAM: thymidylate kinase gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0568 Trad_0569 Trad_0569 Trad_0569 625928 626704 - ABC transporter related protein COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: dal:Dalk_3500 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: B4X464 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0569 Trad_0570 Trad_0570 Trad_0570 626701 627492 - ABC transporter related protein COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003439:IPR003593~KEGG: rrs:RoseRS_0622 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: A5UQZ1 ABC transporter related~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0570 Trad_0571 Trad_0571 Trad_0571 627535 628707 - Extracellular ligand-binding receptor COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828~KEGG: dal:Dalk_3502 extracellular ligand-binding receptor~PFAM: Extracellular ligand-binding receptor~SPTR: B8FBY5 Extracellular ligand-binding receptor~PFAM: Receptor family ligand binding region gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0571 Trad_0572 Trad_0572 Trad_0572 628815 629825 - inner-membrane translocator COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components~InterPro IPR001851~KEGG: dol:Dole_3010 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: A8ZZ40 Inner-membrane translocator~PFAM: Branched-chain amino acid transport system / permease component gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0572 Trad_0573 Trad_0573 Trad_0573 629878 630855 - inner-membrane translocator COGs: COG4177 ABC-type branched-chain amino acid transport system permease component~InterPro IPR001851~KEGG: vap:Vapar_4939 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: C5CP79 Inner-membrane translocator~PFAM: Branched-chain amino acid transport system / permease component gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0573 Trad_0574 Trad_0574 Trad_0574 630852 632642 - AMP-dependent synthetase and ligase COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming)~InterPro IPR020845:IPR000873~KEGG: dol:Dole_3006 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase and ligase~SPTR: A8ZZ36 AMP-dependent synthetase and ligase~PFAM: AMP-binding enzyme gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0574 Trad_0575 Trad_0575 Trad_0575 633022 633807 + glutamine cyclotransferase COGs: COG3823 Glutamine cyclotransferase~InterPro IPR007788:IPR011044:IPR015943~KEGG: gau:GAU_3909 putative glutamine cyclotransferase~PFAM: glutamine cyclotransferase~SPTR: C1AEM4 Putative glutamine cyclotransferase~PFAM: Glutamine cyclotransferase gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0575 Trad_0576 Trad_0576 Trad_0576 633804 634049 - regulatory protein%2C FmdB family COGs: COG2331 conserved hypothetical protein~InterPro IPR013429~KEGG: dra:DR_0301 hypothetical protein~SPTR: Q9RXL0 Putative uncharacterized protein~TIGRFAM: regulatory protein%2C FmdB family~TIGRFAM: putative regulatory protein%2C FmdB family gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0576 Trad_0577 Trad_0577 Trad_0577 634266 635288 + NAD-dependent glycerol-3-phosphate dehydrogenase domain protein COGs: COG0240 Glycerol-3-phosphate dehydrogenase~InterProIPR006168:IPR011128:IPR006109:IPR008927:IPR 016040:IPR013328~KEGG: rmr:Rmar_1270 glycerol-3-phosphate dehydrogenase (NAD(P)(+))~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein~SPTR: D0MI52 Glycerol-3-phosphate dehydrogenase (NAD(P)(+))~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus%3B NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0577 Trad_0578 Trad_0578 Trad_0578 635388 636299 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: ttr:Tter_1669 ABC transporter related protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: D1CCR0 ABC transporter related protein~PFAM: ABC transporter gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0578 Trad_0579 Trad_0579 Trad_0579 636325 637284 + hypothetical protein KEGG: chl:Chy400_3896 hypothetical protein~SPTR: B9LF43 Putative uncharacterized protein gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0579 Trad_0580 Trad_0580 Trad_0580 637288 638490 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR005829:IPR011701:IPR016196~KEGG: afw:Anae109_0558 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: A7H7S6 Major facilitator superfamily MFS_1~PFAM: Major Facilitator Superfamily gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0580 Trad_0581 Trad_0581 Trad_0581 638523 639077 - molybdopterin-guanine dinucleotide biosynthesis protein A COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A~KEGG: ttj:TTHA1305 molybdopterin-guanine dinucleotide biosynthesis protein A~SPTR: B7A7Y2 Molybdopterin-guanine dinucleotide biosynthesis protein A gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0581 Trad_0582 Trad_0582 Trad_0582 639259 640050 + Carboxymethylenebutenolidase COGs: COG0412 Dienelactone hydrolase~InterPro IPR002925~KEGG: chl:Chy400_4044 dienelactone hydrolase~PFAM: dienelactone hydrolase~PRIAM: Carboxymethylenebutenolidase~SPTR: B9LG32 Dienelactone hydrolase~PFAM: Dienelactone hydrolase family gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0582 Trad_0583 Trad_0583 Trad_0583 640063 641415 - protoporphyrinogen oxidase COGs: COG1232 Protoporphyrinogen oxidase~InterPro IPR002937:IPR004572~KEGG: ppd:Ppro_0014 protoporphyrinogen oxidase~PFAM: amine oxidase~PRIAM: Protoporphyrinogen oxidase~SPTR: A1AJY5 Protoporphyrinogen oxidase~TIGRFAM: protoporphyrinogen oxidase~PFAM: Flavin containing amine oxidoreductase~TIGRFAM: protoporphyrinogen oxidase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0583 Trad_0584 Trad_0584 Trad_0584 641462 642790 - DEAD/DEAH box helicase domain protein COGs: COG0513 Superfamily II DNA and RNA helicase~InterProIPR018062:IPR011545:IPR001650:IPR014021:IPR 014014:IPR014001~KEGG: ppd:Ppro_0754 DEAD/DEAH box helicase domain-containing protein~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: C6MQU4 DEAD/DEAH box helicase domain protein~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0584 Trad_0585 Trad_0585 Trad_0585 643087 643869 - response regulator receiver protein COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR011006~KEGG: dhd:Dhaf_3869 two component transcriptional regulator%2C winged helix family~PFAM: response regulator receiver~SMART: response regulator receiver~SPTR: B8FS97 Two component transcriptional regulator%2C winged helix family~PFAM: Response regulator receiver domain gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0585 Trad_0586 Trad_0586 Trad_0586 644062 644952 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: dge:Dgeo_2664 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1J337 ABC-type sugar transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0586 Trad_0587 Trad_0587 Trad_0587 644949 645881 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_2663 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1J338 ABC-type sugar transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0587 Trad_0588 Trad_0588 Trad_0588 646201 647526 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: dge:Dgeo_2662 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q1J339 ABC-type sugar transport system%2C periplasmic component~PFAM: Bacterial extracellular solute-binding protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0588 Trad_0589 Trad_0589 Trad_0589 647776 649629 - serine/threonine protein kinase COGs: COG0515 Serine/threonine protein kinase~InterProIPR017441:IPR008266:IPR017442:IPR002372:IPR 000719:IPR011009:IPR011047:IPR020635:IPR002290:IPR018391~KEGG: dge:Dgeo_1397 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain%3B Pyrrolo-quinoline quinone~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C subgroup%2C catalytic domain%3B Pyrrolo-quinoline quinone beta-propeller repeat~SPTR: Q1IYJ2 Serine/threonine protein kinase~PFAM: Protein kinase domain gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0589 Trad_0590 Trad_0590 Trad_0590 649756 649980 - conserved hypothetical protein KEGG: ttj:TTHA0139 hypothetical protein~SPTR: Q72GJ3 Hypothetical conserved protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0590 Trad_0591 Trad_0591 Trad_0591 650296 651591 + UDP-N-acetylglucosamine1-carboxyvinyltransferase COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase~InterPro IPR001986:IPR013792:IPR005750~KEGG: tth:TTC1854 UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~SPTR: B7ABX7 UDP-N-acetylglucosamine 1-carboxyvinyltransferase~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0591 Trad_0592 Trad_0592 Trad_0592 651737 652933 - ATP-dependent Clp protease%2C ATP-binding subunit ClpX COGs: COG1219 ATP-dependent protease Clp ATPase subunit~InterProIPR010603:IPR013093:IPR019489:IPR004487:IPR 003593~KEGG: tth:TTC0251 ATP-dependent protease ATP-binding subunit ClpX~PFAM: ATPase AAA-2 domain protein%3B zinc finger C4 domain protein%3B Clp ATPase-like~SMART: AAA ATPase~SPTR: C1XK72 ATP-dependent Clp protease ATP-binding subunit ClpX~TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ClpX C4-type zinc finger~TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0592 Trad_0593 Trad_0593 Trad_0593 652933 653562 - Endopeptidase Clp COGs: COG0740 Protease subunit of ATP-dependent Clp protease~InterPro IPR001907~KEGG: dge:Dgeo_2151 endopeptidase Clp~PFAM: peptidase S14 ClpP~PRIAM: Endopeptidase Clp~SPTR: Q1IWD9 ATP-dependent Clp protease proteolytic subunit~PFAM: Clp protease~TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0593 Trad_0594 Trad_0594 Trad_0594 653657 655096 - trigger factor COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)~InterPro IPR008881:IPR008880:IPR005215~KEGG: dge:Dgeo_0432 trigger factor-like protein~PFAM: trigger factor domain%3B trigger factor domain protein~SPTR: Q1J199 Trigger factor~TIGRFAM: trigger factor~PFAM: Bacterial trigger factor protein (TF)%3B Bacterial trigger factor protein (TF) C-terminus~TIGRFAM: trigger factor gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0594 Trad_0595 Trad_0595 Trad_0595 655727 656659 - UV-endonuclease UvdE COGs: COG4294 UV damage repair endonuclease~InterPro IPR004601:IPR013022~KEGG: tth:TT_P0052 putative UV damage endonuclease~PFAM: UV-endonuclease UvdE~SPTR: B7A672 UV-endonuclease UvdE~TIGRFAM: UV-endonuclease UvdE~PFAM: UV-endonuclease UvdE~TIGRFAM: UV damage endonuclease UvdE gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0595 Trad_0596 Trad_0596 Trad_0596 656841 657449 + hypothetical protein KEGG: sen:SACE_2173 transcriptional regulator~SPTR: C8SLP5 Luciferase-like monooxygenase gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0596 Trad_0597 Trad_0597 Trad_0597 657576 658445 + protein of unknown function DUF1080 InterPro IPR010496~KEGG: cja:CJA_0942 domain of unknown function (DUF1080) superfamily~PFAM: protein of unknown function DUF1080~SPTR: A6C7J3 Putative uncharacterized protein~PFAM: Domain of Unknown Function (DUF1080) gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0597 Trad_0598 Trad_0598 Trad_0598 658555 660093 + type III restriction protein res subunit COGs: COG1199 Rad3-related DNA helicase~InterPro IPR006935:IPR014013:IPR001650:IPR006555~KEGG: mth:MTH1347 ATP-dependent helicase~PFAM: type III restriction protein res subunit~SMART: helicase c2~SPTR: O27401 Probable ATP-dependent helicase~PFAM: Type III restriction enzyme%2C res subunit%3B DEAD_2 gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0598 Trad_0599 Trad_0599 Trad_0599 660180 661334 - Inosine/uridine-preferring nucleoside hydrolase COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase~InterPro IPR001910~KEGG: pdi:BDI_1655 putative nucleoside hydrolase~PFAM: Inosine/uridine-preferring nucleoside hydrolase~SPTR: A7AFY3 Putative uncharacterized protein~PFAM: Inosine-uridine preferring nucleoside hydrolase gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0599 Trad_0600 Trad_0600 Trad_0600 661491 662474 + ATPase associated with various cellular activities AAA_3 COGs: COG0714 MoxR-like ATPase~InterPro IPR011703:IPR016366:IPR003593~KEGG: rca:Rcas_3818 ATPase~PFAM: ATPase associated with various cellular activities AAA_3~SMART: AAA ATPase~SPTR: A7NQL0 ATPase associated with various cellular activities AAA_3~PFAM: ATPase family associated with various cellular activities (AAA) gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0600 Trad_0601 Trad_0601 Trad_0601 662477 663346 + protein of unknown function DUF58 COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain)~InterPro IPR002881~KEGG: chl:Chy400_3672 protein of unknown function DUF58~PFAM: protein of unknown function DUF58~SPTR: B9LDS3 Putative uncharacterized protein~PFAM: Protein of unknown function DUF58 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0601 Trad_0602 Trad_0602 Trad_0602 663401 665668 + inner-membrane translocator COGs: COG4603 ABC-type uncharacterized transport system permease component~InterPro IPR001851~KEGG: dra:DR_0250 hypothetical protein~PFAM: inner-membrane translocator~SPTR: Q9RXQ7 Putative uncharacterized protein~PFAM: Branched-chain amino acid transport system / permease component gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0602 Trad_0603 Trad_0603 Trad_0603 665665 666597 + inner-membrane translocator COGs: COG1079 ABC-type transport system permease component~InterPro IPR001851~KEGG: ttj:TTHA1856 ABC transporter permease protein~PFAM: inner-membrane translocator~SPTR: Q5SH74 ABC transporter permease protein~PFAM: Branched-chain amino acid transport system / permease component gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0603 Trad_0604 Trad_0604 Trad_0604 666691 668244 + 4-alpha-glucanotransferase COGs: COG1640 4-alpha-glucanotransferase~InterPro IPR003385:IPR017853:IPR013781~KEGG: rrs:RoseRS_1575 4-alpha-glucanotransferase~PFAM: glycoside hydrolase family 77~PRIAM: 4-alpha-glucanotransferase~SPTR: A5UTL4 4-alpha-glucanotransferase~TIGRFAM: 4-alpha-glucanotransferase~PFAM: 4-alpha-glucanotransferase~TIGRFAM: 4-alpha-glucanotransferase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0604 Trad_0605 Trad_0605 Trad_0605 668241 668828 - YceI family protein InterPro IPR007372~KEGG: rmr:Rmar_0053 YceI family protein~PFAM: YceI family protein~SPTR: D0MK49 YceI family protein~PFAM: YceI-like domain gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0605 Trad_0606 Trad_0606 Trad_0606 668904 669491 - phosphoribosyltransferase COGs: COG1926 phosphoribosyltransferase~InterPro IPR000836~KEGG: met:M446_2872 erythromycin esterase~PFAM: phosphoribosyltransferase~SPTR: A0ZIN7 Putative uncharacterized protein~PFAM: Phosphoribosyl transferase domain gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0606 Trad_0607 Trad_0607 Trad_0607 669687 670247 - hypothetical protein KEGG: rpc:RPC_4715 major facilitator transporter~SPTR: Q20X99 Major facilitator superfamily MFS_1 gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0607 Trad_0608 Trad_0608 Trad_0608 670842 671327 - transcriptional regulator%2C LuxR family InterPro IPR000792:IPR011991:IPR016032~KEGG: dge:Dgeo_2791 LuxR family transcriptional regulator~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~SPTR: B7AC48 Transcriptional regulator%2C LuxR family~PFAM: Bacterial regulatory proteins%2C luxR family gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0608 Trad_0609 Trad_0609 Trad_0609 671788 671943 + hypothetical protein KEGG: hypothetical protein~SPTR: Q5KBV1 2%2C4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase%2C putative gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0609 Trad_0610 Trad_0610 Trad_0610 671943 672149 + hypothetical protein KEGG: similar to F15D4.7~SPTR: A5BJH6 Putative uncharacterized protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0610 Trad_0611 Trad_0611 Trad_0611 672149 672544 + transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: dge:Dgeo_2273 transposase IS200-like protein~PFAM: transposase IS200-family protein~SPTR: C1XYM9 Transposase~PFAM: Transposase IS200 like gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0611 Trad_0612 Trad_0612 Trad_0612 672544 673743 + transposase%2C IS605 OrfB family COGs: COG0675 Transposase and inactivated derivatives~InterPro IPR010095:IPR001959~KEGG: dge:Dgeo_2272 putative transposase%2C IS891/IS1136/IS1341~PFAM: putative transposase IS891/IS1136/IS1341 family%3B transposase IS605 OrfB~SPTR: C1XTD3 Transposase%2C IS605 OrfB family%2C central region~TIGRFAM: transposase%2C IS605 OrfB family~PFAM: Helix-turn-helix domain%3B Putative transposase DNA-binding domain%3B Probable transposase~TIGRFAM: transposase%2C IS605 OrfB family%2C central region gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0612 Trad_0613 Trad_0613 Trad_0613 673926 675002 - hypothetical protein KEGG: pdi:BDI_0434 putative hexapeptide transferase family protein~SPTR: B9ZER4 Putative uncharacterized protein gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0613 Trad_0614 Trad_0614 Trad_0614 675290 677215 + acetoacetyl-CoA synthase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR005914:IPR020845:IPR000873~KEGG: aeh:Mlg_2108 acetoacetyl-CoA synthetase~PFAM: AMP-dependent synthetase and ligase~SPTR: Q0A6T7 Acetoacetyl-CoA synthase~TIGRFAM: acetoacetyl-CoA synthase~PFAM: Domain of unknown function (DUF3448)%3B AMP-binding enzyme~TIGRFAM: acetoacetyl-CoA synthase gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0614 Trad_0615 Trad_0615 Trad_0615 677318 678079 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR016040:IPR002347~KEGG: hau:Haur_0974 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: A9AZ76 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0615 Trad_0616 Trad_0616 Trad_0616 678176 679021 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: hor:Hore_20850 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B8CZX8 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0616 Trad_0617 Trad_0617 Trad_0617 679018 680124 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: hor:Hore_20860 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B8CZX9 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0617 Trad_0618 Trad_0618 Trad_0618 680245 681585 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: hor:Hore_20870 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: B8CZY0 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0618 Trad_0619 Trad_0619 Trad_0619 682002 683033 - Holliday junction DNA helicase RuvB COGs: COG2255 Holliday junction resolvasome helicase subunit~InterProIPR003593:IPR004605:IPR008824:IPR003959:IPR 008823:IPR011991~KEGG: dra:DR_0596 Holliday junction DNA helicase RuvB~PFAM: AAA ATPase central domain protein%3B Holliday junction DNA helicase RuvB domain~SMART: AAA ATPase~SPTR: C1XMJ6 Holliday junction DNA helicase subunit RuvB~TIGRFAM: Holliday junction DNA helicase RuvB~PFAM: Holliday junction DNA helicase ruvB C-terminus%3B Holliday junction DNA helicase ruvB N-terminus~TIGRFAM: Holliday junction DNA helicase%2C RuvB subunit gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0619 Trad_0620 Trad_0620 Trad_0620 683128 684771 - MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: nth:Nther_2295 MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~SPTR: B2A8H7 MATE efflux family protein~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0620 Trad_0621 Trad_0621 Trad_0621 684836 685750 - dihydrodipicolinate synthetase COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase~InterPro IPR020625:IPR002220:IPR013785~KEGG: gau:GAU_0904 putative dihydrodipicolinate synthetase~PFAM: dihydrodipicolinate synthetase~SPTR: C1A6T6 Putative dihydrodipicolinate synthetase~PFAM: Dihydrodipicolinate synthetase family gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0621 Trad_0622 Trad_0622 Trad_0622 685823 686683 + formyltetrahydrofolate deformylase COGs: COG0788 Formyltetrahydrofolate hydrolase~InterPro IPR004810:IPR002912:IPR002376~KEGG: cpi:Cpin_2012 formyltetrahydrofolate deformylase~PFAM: formyl transferase domain protein%3B amino acid-binding ACT domain protein~SPTR: C1XUP6 Formyltetrahydrofolate deformylase~TIGRFAM: formyltetrahydrofolate deformylase~PFAM: ACT domain%3B Formyl transferase~TIGRFAM: formyltetrahydrofolate deformylase gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0622 Trad_0623 Trad_0623 Trad_0623 686790 687335 + phosphoribosyltransferase COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein~InterPro IPR000836~KEGG: ttj:TTHA1614 adenine phosphoribosyltransferase~PFAM: phosphoribosyltransferase~SPTR: Q72I82 Adenine phosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0623 Trad_0624 Trad_0624 Trad_0624 687537 689366 + DNA primase COGs: COG0358 DNA primase~InterProIPR002694:IPR006154:IPR006295:IPR013264:IPR 006171~KEGG: dge:Dgeo_1910 DNA primase~PFAM: DNA primase catalytic core domain%3B zinc finger CHC2-family protein%3B TOPRIM domain protein~SMART: zinc finger CHC2-family protein%3B Toprim sub domain protein~SPTR: Q1IX29 DNA primase~TIGRFAM: DNA primase~PFAM: Toprim domain%3B CHC2 zinc finger%3B DNA primase catalytic core%2C N-terminal domain~TIGRFAM: DNA primase%2C catalytic core gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0624 Trad_0625 Trad_0625 Trad_0625 689559 689921 - conserved hypothetical protein KEGG: chl:Chy400_3025 hypothetical protein~SPTR: B9LM21 Putative uncharacterized protein gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0625 Trad_0626 Trad_0626 Trad_0626 689918 690670 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: tth:TTC0419 ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q72KS3 ABC transporter permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0626 Trad_0627 Trad_0627 Trad_0627 690667 691443 - ABC transporter related protein COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: tth:TTC0420 ABC transporter ATP-binding protein (taurine)~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q72KS2 ABC transporter ATP-binding protein (Taurine)~PFAM: ABC transporter gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0627 Trad_0628 Trad_0628 Trad_0628 691443 692576 - NMT1/THI5 like domain protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR015168~KEGG: tth:TTC0421 ABC transporter substrate-binding protein (taurine)~PFAM: NMT1/THI5 like domain protein~SPTR: Q72KS1 ABC transporter substrate-binding protein (Taurine)~PFAM: NMT1/THI5 like gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0628 Trad_0629 Trad_0629 Trad_0629 692884 694209 + cytochrome P450 COGs: COG2124 Cytochrome P450~InterPro IPR001128~KEGG: sen:SACE_2090 cytochrome P450 monooxygenase~PFAM: cytochrome P450~SPTR: A4FBH2 Cytochrome P450 monooxygenase~PFAM: Cytochrome P450 gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0629 Trad_0630 Trad_0630 Trad_0630 694335 695540 + glycogen synthase COGs: COG0438 Glycosyltransferase~InterPro IPR011875:IPR001296~KEGG: sru:SRU_1930 glycosyl transferase~PFAM: glycosyl transferase group 1~SPTR: Q2S191 Glycosyl transferase~TIGRFAM: glycogen synthase~PFAM: Starch synthase catalytic domain%3B Glycosyl transferases group 1~TIGRFAM: glycogen synthase%2C Corynebacterium family gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0630 Trad_0631 Trad_0631 Trad_0631 696946 697101 + hypothetical protein KEGG: hypothetical protein~SPTR: Q5KBV1 2%2C4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase%2C putative gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0631 Trad_0632 Trad_0632 Trad_0632 697101 697307 + hypothetical protein KEGG: similar to F15D4.7~SPTR: A5BJH6 Putative uncharacterized protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0632 Trad_0633 Trad_0633 Trad_0633 697307 697702 + transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: dge:Dgeo_2273 transposase IS200-like protein~PFAM: transposase IS200-family protein~SPTR: C1XYM9 Transposase~PFAM: Transposase IS200 like gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0633 Trad_0634 Trad_0634 Trad_0634 697702 698901 + transposase%2C IS605 OrfB family COGs: COG0675 Transposase and inactivated derivatives~InterPro IPR010095:IPR001959~KEGG: dge:Dgeo_2272 putative transposase%2C IS891/IS1136/IS1341~PFAM: putative transposase IS891/IS1136/IS1341 family%3B transposase IS605 OrfB~SPTR: C1XTD3 Transposase%2C IS605 OrfB family%2C central region~TIGRFAM: transposase%2C IS605 OrfB family~PFAM: Helix-turn-helix domain%3B Putative transposase DNA-binding domain%3B Probable transposase~TIGRFAM: transposase%2C IS605 OrfB family%2C central region gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0634 Trad_0635 Trad_0635 Trad_0635 699005 699715 + hypothetical protein InterPro IPR018114:IPR009003~KEGG: mma:MM_1722 hypothetical protein~SPTR: Q8PW74 Putative uncharacterized protein gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0635 Trad_0636 Trad_0636 Trad_0636 699736 700284 + hypothetical protein KEGG: ddr:Deide_05301 conserved hypothetical protein%2C precursor~SPTR: C1D0J3 Putative uncharacterized protein gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0636 Trad_0637 Trad_0637 Trad_0637 700511 702184 - type I restriction-modification system methyltransferase subunit-like protein InterPro IPR002052:IPR002296~KEGG: mch:Mchl_5430 type I restriction-modification system methyltransferase subunit-like protein~SPTR: B7L2X7 Type I restriction-modification system methyltransferase subunit-like protein~PFAM: N-6 DNA Methylase gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0637 Trad_0638 Trad_0638 Trad_0638 702291 704108 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR003593:IPR003439:IPR017940:IPR017871:IPR 001140:IPR011527~KEGG: neu:NE0720 ABC transporter permease/ATP-binding protein~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: Q82WG0 ABC transporter%2C fused permease and ATPase domains~manually curated~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0638 Trad_0639 Trad_0639 Trad_0639 704161 704817 - transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterProIPR000595:IPR001808:IPR012318:IPR014710:IPR 011991:IPR018490~KEGG: sgr:SGR_3333 Crp/Fnr family transcriptional regulator~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding%3B regulatory protein Crp~SPTR: C9Z3V0 Putative cyclic-nucleotide-binding protein~PFAM: Cyclic nucleotide-binding domain gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0639 Trad_0640 Trad_0640 Trad_0640 704920 706188 - dihydroorotase%2C multifunctional complex type COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase~InterPro IPR004722:IPR002195:IPR006680:IPR011059~KEGG: dge:Dgeo_0502 dihydroorotase~PFAM: amidohydrolase~SPTR: Q1J130 Dihydroorotase~TIGRFAM: dihydroorotase%2C multifunctional complex type~PFAM: Amidohydrolase family~TIGRFAM: dihydroorotase%2C multifunctional complex type gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0640 Trad_0641 Trad_0641 Trad_0641 706188 707111 - aspartate carbamoyltransferase COGs: COG0540 Aspartate carbamoyltransferase catalytic chain~InterPro IPR002082:IPR006130:IPR006132:IPR006131~KEGG: dra:DR_1109 aspartate carbamoyltransferase catalytic subunit~PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain%3B aspartate/ornithine carbamoyltransferase Asp/Orn-binding region~PRIAM: Aspartate carbamoyltransferase~SPTR: Q9RVC0 Aspartate carbamoyltransferase~TIGRFAM: aspartate carbamoyltransferase~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain~TIGRFAM: aspartate carbamoyltransferase gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0641 Trad_0642 Trad_0642 Trad_0642 707108 707653 - Uracil phosphoribosyltransferase COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase~InterPro IPR000836~KEGG: ddr:Deide_18100 putative bifunctional protein PyrR: pyrimidine operon regulatory protein/uracil phosphoribosyltransferase~PFAM: phosphoribosyltransferase~PRIAM: Uracil phosphoribosyltransferase~SPTR: C1CX80 Bifunctional protein pyrR~PFAM: Phosphoribosyl transferase domain gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0642 Trad_0643 Trad_0643 Trad_0643 708068 708466 - conserved hypothetical protein KEGG: ana:all2069 hypothetical protein~SPTR: Q8YVB2 All2069 protein gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0643 Trad_0644 Trad_0644 Trad_0644 708463 708936 - NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR020084:IPR000086:IPR015797:IPR020476~KEGG: dge:Dgeo_0608 NUDIX hydrolase~PFAM: NUDIX hydrolase~SPTR: Q1J0S4 NUDIX hydrolase~PFAM: NUDIX domain gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0644 Trad_0645 Trad_0645 Trad_0645 708923 710044 - peptide chain release factor 1 COGs: COG0216 Protein chain release factor A~InterPro IPR004373:IPR000352:IPR005139~KEGG: ttj:TTHA1940 peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B PCRF domain protein~SPTR: C1XH05 Bacterial peptide chain release factor 1 (BRF-1)~TIGRFAM: peptide chain release factor 1~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 1 gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0645 Trad_0646 Trad_0646 Trad_0646 710147 711307 - ABC-type branched-chain amino acid transport systems periplasmic component COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR006224~KEGG: tth:TTC0597 leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein~SPTR: Q72K21 Leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0646 Trad_0647 Trad_0647 Trad_0647 711536 711865 + protein of unknown function DUF970 COGs: COG3870 conserved hypothetical protein~InterPro IPR010375:IPR011322~KEGG: ttj:TTHA0611 hypothetical protein~PFAM: protein of unknown function DUF970~SPTR: C1XPR8 Uncharacterized conserved protein~PFAM: Protein of unknown function (DUF970) gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0647 Trad_0648 Trad_0648 Trad_0648 712119 712310 + hypothetical protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0648 Trad_0649 Trad_0649 Trad_0649 712495 712806 + putative dolichyl-phosphate-mannose--protein mannosyltransferase%3B putative membrane protein KEGG: fal:FRAAL6290 putative dolichyl-phosphate-mannose--protein mannosyltransferase%3B putative membrane protein~SPTR: Q0RCB4 Putative Dolichyl-phosphate-mannose--protein mannosyltransferase%3B putative membrane protein gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0649 Trad_0650 Trad_0650 Trad_0650 713110 714468 + methyltransferase type 11 KEGG: afw:Anae109_0133 methyltransferase type 11~SPTR: A7H6K5 Methyltransferase type 11 gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0650 Trad_0651 Trad_0651 Trad_0651 714553 716193 + peptidase S49 COGs: COG0616 Periplasmic serine protease (ClpP class)~InterPro IPR004634:IPR002142~KEGG: ddr:Deide_13000 putative peptidase S49%2C signal peptide peptidase (SPPase)~PFAM: peptidase S49~SPTR: C1CVK4 Putative peptidase S49%2C Signal peptide peptidase (SPPase)~PFAM: Peptidase family S49~TIGRFAM: signal peptide peptidase SppA%2C 36K type%3B signal peptide peptidase SppA%2C 67K type gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0651 Trad_0652 Trad_0652 Trad_0652 716274 717800 - transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000014:IPR001610:IPR000792:IPR000700:IPR 013655:IPR011991:IPR016032~KEGG: bmj:BMULJ_03363 transcriptional regulator~PFAM: regulatory protein LuxR%3B PAS fold-3 domain protein~SMART: regulatory protein LuxR%3B PAS domain containing protein%3B PAC repeat-containing protein~SPTR: A9AQ51 Transcriptional regulator~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory proteins%2C luxR family%3B PAS fold~TIGRFAM: PAS domain S-box gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0652 Trad_0653 Trad_0653 Trad_0653 717884 718327 - PRC-barrel domain protein InterPro IPR007903:IPR011033~KEGG: mma:MM_1793 hypothetical protein~PFAM: PRC-barrel domain protein~SPTR: Q3SGN2 Putative uncharacterized protein~PFAM: PRC-barrel domain gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0653 Trad_0654 Trad_0654 Trad_0654 718461 719735 + acetyl-CoA acetyltransferase COGs: COG0183 Acetyl-CoA acetyltransferase~InterPro IPR002155:IPR016038:IPR016039~KEGG: ddr:Deide_17090 putative beta-ketoadipyl CoA thiolase~PRIAM: 3-oxoadipyl-CoA thiolase~SPTR: Q1IYT3 Acetyl-CoA C-acetyltransferase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase%2C C-terminal domain%3B Thiolase%2C N-terminal domain~TIGRFAM: acetyl-CoA acetyltransferases gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0654 Trad_0655 Trad_0655 Trad_0655 719811 721013 + major facilitator superfamily MFS_1 InterPro IPR005829:IPR011701:IPR016196~KEGG: rca:Rcas_0526 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: A7NGR3 Major facilitator superfamily MFS_1~PFAM: Major Facilitator Superfamily gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0655 Trad_0656 Trad_0656 Trad_0656 720945 721883 - protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: ter:Tery_3455 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: B4W016 Integral membrane protein DUF6~PFAM: EamA-like transporter family gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0656 Trad_0657 Trad_0657 Trad_0657 721928 723355 - Glucuronate isomerase COGs: COG1904 Glucuronate isomerase~InterPro IPR003766~KEGG: npu:Npun_F5333 glucuronate isomerase HrmI~PFAM: Glucuronate isomerase~PRIAM: Glucuronate isomerase~SPTR: Q9KHA1 Uronate isomerase~PFAM: Glucuronate isomerase gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0657 Trad_0658 Trad_0658 Trad_0658 723352 723867 - carbohydrate kinase%2C thermoresistant glucokinase family COGs: COG3265 Gluconate kinase~InterPro IPR006001:IPR000623~KEGG: rmr:Rmar_0555 carbohydrate kinase%2C thermoresistant glucokinase family~PFAM: shikimate kinase~PRIAM: Gluconokinase~SPTR: D0MF05 Carbohydrate kinase%2C thermoresistant glucokinase family~TIGRFAM: carbohydrate kinase%2C thermoresistant glucokinase family~PFAM: Shikimate kinase~TIGRFAM: carbohydrate kinase%2C thermoresistant glucokinase family gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0658 Trad_0659 Trad_0659 Trad_0659 723864 724292 - phosphoribosyltransferase COGs: COG2236 phosphoribosyltransferase~InterPro IPR000836~KEGG: lxx:Lxx18900 xanthine-guanine phosphoribosyltransferase~PFAM: phosphoribosyltransferase~SPTR: C0A4C6 Putative uncharacterized protein~PFAM: Phosphoribosyl transferase domain gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0659 Trad_0660 Trad_0660 Trad_0660 724292 725557 - Protein of unknown function DUF2088 COGs: COG3875 conserved hypothetical protein~InterPro IPR018657~KEGG: rca:Rcas_3031 hypothetical protein~PFAM: Protein of unknown function DUF2088~SPTR: A6CCB6 Putative uncharacterized protein~PFAM: Uncharacterized conserved protein (DUF2088) gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0660 Trad_0661 Trad_0661 Trad_0661 725560 726366 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR016040:IPR002347~KEGG: rxy:Rxyl_0080 D-mannonate oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Q1AZW7 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0661 Trad_0662 Trad_0662 Trad_0662 726359 726913 - conserved hypothetical protein KEGG: bde:BDP_0832 hypothetical protein~SPTR: B1S5Z9 Putative uncharacterized protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0662 Trad_0663 Trad_0663 Trad_0663 726910 728376 - conserved hypothetical protein KEGG: rmr:Rmar_1528 hypothetical protein~SPTR: D0MIV7 Putative uncharacterized protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0663 Trad_0664 Trad_0664 Trad_0664 728393 729394 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761:IPR010982~KEGG: rle:pRL100275 putative transcriptional regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: Q1M7M9 Putative transcriptional regulator~manually curated~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0664 Trad_0665 Trad_0665 Trad_0665 729693 730679 + TRAP dicarboxylate transporter%2C DctP subunit COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component~InterPro IPR004682:IPR018389~KEGG: rsq:Rsph17025_2411 TRAP dicarboxylate transporter%2C DctP subunit~PFAM: Extracellular solute-binding protein%2C family 7~SPTR: A4WV85 TRAP dicarboxylate transporter%2C DctP subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctP subunit~PFAM: Bacterial extracellular solute-binding protein%2C family 7~TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor%2C DctP family gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0665 Trad_0666 Trad_0666 Trad_0666 730682 732613 + TRAP dicarboxylate transporter%2C DctM subunit COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component~InterPro IPR004681:IPR007387:IPR010656~KEGG: tnp:Tnap_0219 TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit%3B Tripartite ATP-independent periplasmic transporter DctQ component~SPTR: B9KBL5 TRAP dicarboxylate transporter%2C DctM subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: DctM-like transporters%3B Tripartite ATP-independent periplasmic transporters%2C DctQ component~TIGRFAM: TRAP transporter%2C DctM subunit gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0666 Trad_0667 Trad_0667 Trad_0667 732658 733644 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: oih:OB3261 oxidoreductase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: Q8ELG6 Oxidoreductase~PFAM: Oxidoreductase family%2C C-terminal alpha/beta domain%3B Oxidoreductase family%2C NAD-binding Rossmann fold gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0667 Trad_0668 Trad_0668 Trad_0668 733902 734780 - sulfotransferase InterPro IPR000863~KEGG: cyc:PCC7424_4202 sulfotransferase~PFAM: sulfotransferase~SPTR: B7KLK0 Sulfotransferase~PFAM: Sulfotransferase domain gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0668 Trad_0669 Trad_0669 Trad_0669 735050 736615 + AMP-dependent synthetase and ligase COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II~InterPro IPR020845:IPR000873~KEGG: hau:Haur_4238 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase and ligase~SPTR: A9AXF0 AMP-dependent synthetase and ligase~PFAM: AMP-binding enzyme gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0669 Trad_0670 Trad_0670 Trad_0670 737156 737395 + hypothetical protein InterPro IPR002491~KEGG: dge:Dgeo_2363 periplasmic binding protein~SPTR: Q1J3Y0 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0670 Trad_0671 Trad_0671 Trad_0671 737404 738450 + transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: dge:Dgeo_0024 transport system permease protein~PFAM: transport system permease protein~SPTR: Q1J2F6 ABC-type Fe3+-siderophore transport system%2C permease component~PFAM: FecCD transport family gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0671 Trad_0672 Trad_0672 Trad_0672 738591 740117 + protein of unknown function DUF201 InterPro IPR003806~KEGG: bra:BRADO3484 hypothetical protein~PFAM: protein of unknown function DUF201~SPTR: A4YTP0 Putative uncharacterized protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0672 Trad_0673 Trad_0673 Trad_0673 740167 740799 + Phosphoglycerate mutase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR001345:IPR013078~KEGG: dge:Dgeo_1615 phosphoglycerate mutase~PFAM: Phosphoglycerate mutase~SPTR: C1XTW9 Phosphoglycerate mutase~PFAM: Phosphoglycerate mutase family gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0673 Trad_0674 Trad_0674 Trad_0674 741049 741645 + Phosphoglycerate mutase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR013078~KEGG: ddr:Deide_14100 putative phosphoglycerate mutase~PFAM: Phosphoglycerate mutase~SPTR: C1CVZ0 Putative Phosphoglycerate mutase~PFAM: Phosphoglycerate mutase family gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0674 Trad_0675 Trad_0675 Trad_0675 741674 742732 - Glutamine--fructose-6-phosphate transaminase (isomerizing) COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains~InterPro IPR001347~KEGG: sti:Sthe_2061 glutamine--fructose-6-phosphate transaminase (isomerizing)~PFAM: sugar isomerase (SIS)~PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing)~SPTR: D1C5T9 Glutamine--fructose-6-phosphate transaminase (Isomerizing)~PFAM: SIS domain gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0675 Trad_0676 Trad_0676 Trad_0676 742884 744149 + amine oxidase COGs: COG1233 Phytoene dehydrogenase and related protein~InterPro IPR002937~KEGG: dra:DR_2015 oxidoreductase%2C FAD-binding~PFAM: amine oxidase~SPTR: Q9RSV7 Oxidoreductase%2C FAD-binding~PFAM: Flavin containing amine oxidoreductase gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0676 Trad_0677 Trad_0677 Trad_0677 744153 744461 - conserved hypothetical protein COGs: COG2388 acetyltransferase~InterPro IPR016181~KEGG: bpt:Bpet3331 hypothetical protein~SPTR: A9HWY1 Putative uncharacterized protein~PFAM: Acetyltransferase (GNAT) family gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0677 Trad_0678 Trad_0678 Trad_0678 744497 745444 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase~InterPro IPR006140:IPR016040~KEGG: hypothetical protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~SPTR: Q7S5T8 Putative uncharacterized protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0678 Trad_0679 Trad_0679 Trad_0679 745537 746199 - transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterProIPR000595:IPR001808:IPR012318:IPR014710:IPR 018490~KEGG: hor:Hore_18160 putative transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: regulatory protein Crp%3B cyclic nucleotide-binding~SPTR: A7BAE3 Putative uncharacterized protein~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0679 Trad_0680 Trad_0680 Trad_0680 746386 747492 + peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR001131:IPR000994~KEGG: hau:Haur_2751 peptidase M24~PFAM: peptidase M24~SPTR: A9B1U7 Peptidase M24~PFAM: Metallopeptidase family M24%3B Creatinase/Prolidase N-terminal domain gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0680 Trad_0681 Trad_0681 Trad_0681 747679 749379 - PKD domain containing protein COGs: COG3291 FOG: PKD repeat~InterPro IPR000601~KEGG: rbi:RB2501_13489 putative secreted protein~PFAM: PKD domain containing protein~SMART: PKD domain containing protein~SPTR: A4CKE5 Putative secreted protein~PFAM: PKD domain gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0681 Trad_0682 Trad_0682 Trad_0682 749590 750228 + uracil phosphoribosyltransferase COGs: COG0035 Uracil phosphoribosyltransferase~InterPro IPR005765:IPR000836~KEGG: ttj:TTHA1312 uracil phosphoribosyltransferase~PFAM: phosphoribosyltransferase~SPTR: B7AA22 Uracil phosphoribosyltransferase~TIGRFAM: uracil phosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: uracil phosphoribosyltransferase gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0682 Trad_0683 Trad_0683 Trad_0683 750386 751495 + Glycosyl transferase%2C family 4%2C conserved region COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase~InterPro IPR018480:IPR018481~KEGG: dge:Dgeo_1295 glycosyl transferase family protein~PFAM: Glycosyl transferase%2C family 4%2C conserved region~SPTR: Q1IYU3 Glycosyl transferase%2C family 4~PFAM: Glycosyl transferase family 4 gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0683 Trad_0684 Trad_0684 Trad_0684 751510 752625 + UDP-N-acetylglucosamine 2-epimerase COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase~InterPro IPR003331~KEGG: ttj:TTHA1314 UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase~PRIAM: UDP-N-acetylglucosamine 2-epimerase~SPTR: C1XGN4 UDP-N-acetylglucosamine 2-epimerase~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0684 Trad_0685 Trad_0685 Trad_0685 752663 753265 - protein of unknown function DUF205 COGs: COG0344 membrane protein~InterPro IPR003811~KEGG: scl:sce5504 hypothetical protein~PFAM: protein of unknown function DUF205~SPTR: A3Z0Q6 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF205)~TIGRFAM: conserved hypothetical integral membrane protein TIGR00023 gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0685 Trad_0686 Trad_0686 Trad_0686 753275 754048 - DNA repair protein RecO COGs: COG1381 Recombinational DNA repair protein (RecF pathway)~InterPro IPR003717~KEGG: ddr:Deide_13810 putative DNA repair protein RecO (recombination protein O)~PFAM: Recombination protein O RecO~SPTR: C1CVV5 Putative DNA repair protein RecO (Recombination protein O)~TIGRFAM: DNA repair protein RecO~PFAM: Recombination protein O C terminal%3B Recombination protein O N terminal~TIGRFAM: DNA repair protein RecO gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0686 Trad_0687 Trad_0687 Trad_0687 754170 755501 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR003660:IPR003661:IPR003594:IPR005467:IPR 009082:IPR004358~KEGG: tth:TTC0998 sensory transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SPTR: C1XXB2 Sensor protein~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0687 Trad_0688 Trad_0688 Trad_0688 755553 756086 + hypothetical protein KEGG: stp:Strop_2685 hypothetical protein~SPTR: C0U342 Putative uncharacterized protein gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0688 Trad_0689 Trad_0689 Trad_0689 756083 756322 - putative peptidase KEGG: car:cauri_0068 putative peptidase~SPTR: C6R9S1 Peptidase%2C M20/M25/M40 family gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0689 Trad_0690 Trad_0690 Trad_0690 756327 757406 - recA protein COGs: COG0468 RecA/RadA recombinase~InterProIPR003593:IPR013765:IPR020588:IPR020587:IPR 020584:IPR001553~KEGG: sth:STH1665 multifunctional protein involved in homologous recombination~PFAM: RecA domain protein~SMART: AAA ATPase~SPTR: C1XMY2 Protein recA~TIGRFAM: recA protein~PFAM: recA bacterial DNA recombination protein~TIGRFAM: protein RecA gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0690 Trad_0691 Trad_0691 Trad_0691 757568 759004 + transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000014:IPR000792:IPR013656:IPR013767:IPR 011991:IPR016032~KEGG: bam:Bamb_5247 LuxR family transcriptional regulator~PFAM: regulatory protein LuxR%3B PAS fold domain protein%3B PAS fold-4 domain protein~SMART: regulatory protein LuxR%3B PAS domain containing protein~SPTR: A2WHF6 Putative uncharacterized protein~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory proteins%2C luxR family~TIGRFAM: PAS domain S-box gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0691 Trad_0692 Trad_0692 Trad_0692 759330 760484 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: rxy:Rxyl_0392 oxidoreductase-like protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: Q1AZ11 Oxidoreductase-like protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0692 Trad_0693 Trad_0693 Trad_0693 760621 761625 - Xylose isomerase domain protein TIM barrel COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR012307:IPR011418:IPR013022~KEGG: dge:Dgeo_2826 xylose isomerase-like TIM barrel~PFAM: Xylose isomerase domain protein TIM barrel%3B AP endonuclease 2 domain protein~SPTR: Q1J2M9 Xylose isomerase-like protein TIM barrel~PFAM: AP endonuclease family 2 C terminus%3B Xylose isomerase-like TIM barrel gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0693 Trad_0694 Trad_0694 Trad_0694 761774 762742 - ABC ribose transporter%2C periplasmic solute-binding protein COGs: COG1879 ABC-type sugar transport system periplasmic component~KEGG: pde:Pden_4771 ABC ribose transporter%2C periplasmic solute-binding protein~SPTR: Q0G1P1 ABC ribose transporter%2C periplasmic solute-binding protein~PFAM: family gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0694 Trad_0695 Trad_0695 Trad_0695 762884 763879 - inner-membrane translocator COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components~InterPro IPR001851~KEGG: pde:Pden_4770 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: B9R3J9 Putative amino acid or sugar ABC transport system%2C permease protein~PFAM: Branched-chain amino acid transport system / permease component gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0695 Trad_0696 Trad_0696 Trad_0696 763876 765432 - ABC transporter related protein COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: rsp:RSP_1247 ABC sugar transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q0G1P3 ABC sugar transporter%2C ATPase subunit~PFAM: ABC transporter gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0696 Trad_0697 Trad_0697 Trad_0697 765725 766840 - transposase%2C IS605 OrfB family COGs: COG0675 Transposase and inactivated derivatives~InterPro IPR010095:IPR001959~KEGG: dge:Dgeo_2738 putative transposase%2C IS891/IS1136/IS1341~PFAM: putative transposase IS891/IS1136/IS1341 family%3B transposase IS605 OrfB~SPTR: C1XIB4 Transposase%2C IS605 OrfB family%2C central region~TIGRFAM: transposase%2C IS605 OrfB family~PFAM: Helix-turn-helix domain%3B Putative transposase DNA-binding domain%3B Probable transposase~TIGRFAM: transposase%2C IS605 OrfB family%2C central region gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0697 Trad_0698 Trad_0698 Trad_0698 766841 767242 - transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: trq:TRQ2_0990 transposase IS200-family protein~PFAM: transposase IS200-family protein~SPTR: B1LAJ2 Transposase IS200-family protein~PFAM: Transposase IS200 like gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0698 Trad_0699 Trad_0699 Trad_0699 767406 768455 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: bbe:BBR47_17150 putative oxidoreductase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C1XV52 Predicted dehydrogenase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0699 Trad_0700 Trad_0700 Trad_0700 768584 769312 - protein of unknown function DUF1037 COGs: COG4813 Trehalose utilization protein~InterPro IPR009381~KEGG: oih:OB2566 hypothetical protein~PFAM: protein of unknown function DUF1037~SPTR: A6CLV1 Trehalose utilization protein~PFAM: Trehalose utilisation gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0700 Trad_0701 Trad_0701 Trad_0701 769885 770391 + hypothetical protein KEGG: hypothetical protein~SPTR: A8IF66 Predicted protein gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0701 Trad_0702 Trad_0702 Trad_0702 770417 771276 - Transposase-like protein COGs: COG3293 Transposase and inactivated derivatives~KEGG: dge:Dgeo_2686 putative IS1648 transposase~SPTR: Q1J315 Putative IS1648 transposase~manually curated~PFAM: Transposase DDE domain gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0702 Trad_0703 Trad_0703 Trad_0703 771458 771637 - protein of unknown function DUF1328 InterPro IPR009760~KEGG: pna:Pnap_0032 hypothetical protein~PFAM: protein of unknown function DUF1328~SPTR: A1VI80 UPF0391 membrane protein Pnap_0032~PFAM: Protein of unknown function (DUF1328) gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0703 Trad_0704 Trad_0704 Trad_0704 771756 773282 - FAD dependent oxidoreductase COGs: COG0665 Glycine/D-amino acid oxidase (deaminating)~InterPro IPR017941:IPR006076:IPR005805~KEGG: dba:Dbac_1184 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase%3B Rieske [2Fe-2S] iron-sulphur domain~SPTR: C7LRE2 FAD dependent oxidoreductase~PFAM: Rieske [2Fe-2S] domain%3B FAD dependent oxidoreductase gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0704 Trad_0705 Trad_0705 Trad_0705 773531 774466 + Formamidase COGs: COG2421 acetamidase/formamidase~InterPro IPR004304~KEGG: sme:SMc04290 hypothetical protein~PFAM: Acetamidase/Formamidase~PRIAM: Formamidase~SPTR: Q2CET9 Acetamidase/formamidase family protein~PFAM: Acetamidase/Formamidase family gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0705 Trad_0706 Trad_0706 Trad_0706 774594 775493 + ribokinase COGs: COG0524 Sugar kinase ribokinase family~InterPro IPR011877:IPR002173:IPR011611:IPR002139~KEGG: acr:Acry_2877 ribokinase-like domain-containing protein~PFAM: PfkB domain protein~SPTR: C1XRJ7 Ribokinase~TIGRFAM: ribokinase~PFAM: pfkB family carbohydrate kinase~TIGRFAM: ribokinase gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0706 Trad_0707 Trad_0707 Trad_0707 775503 775796 - phage shock protein C%2C PspC COGs: COG1983 Putative stress-responsive transcriptional regulator protein~InterPro IPR007168~KEGG: bay:RBAM_032260 YvlC~PFAM: PspC domain protein~SPTR: C0U831 Putative stress-responsive transcriptional regulator~PFAM: PspC domain gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0707 Trad_0708 Trad_0708 Trad_0708 775814 776164 - protein of unknown function DUF309 InterPro IPR005500~KEGG: dge:Dgeo_1836 hypothetical protein~PFAM: protein of unknown function DUF309~SPTR: Q1IXA3 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF309) gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0708 Trad_0709 Trad_0709 Trad_0709 776169 776564 - conserved hypothetical protein KEGG: ttj:TTHA0227 hypothetical protein~SPTR: Q5SLR6 Putative uncharacterized protein TTHA0227 gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0709 Trad_0710 Trad_0710 Trad_0710 776613 776954 - conserved hypothetical protein COGs: COG4634 conserved hypothetical protein~KEGG: cyn:Cyan7425_0499 hypothetical protein~SPTR: B8HTX0 Putative uncharacterized protein~manually curated gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0710 Trad_0711 Trad_0711 Trad_0711 776951 777181 - protein of unknown function DUF433 COGs: COG2442 conserved hypothetical protein~InterPro IPR007367~KEGG: syn:ssl2733 hypothetical protein~PFAM: protein of unknown function DUF433~SPTR: P72616 Ssl2733 protein~PFAM: Protein of unknown function (DUF433) gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0711 Trad_0712 Trad_0712 Trad_0712 777521 777898 + pilin%2C type IV%2C putative InterPro IPR012902:IPR001120~KEGG: dra:DR_0548 pilin%2C type IV%2C putative~SPTR: Q9RWW7 Pilin%2C type IV%2C putative~PFAM: Prokaryotic N-terminal methylation motif~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0712 Trad_0713 Trad_0713 Trad_0713 777994 778365 + pilin%2C type IV%2C putative KEGG: dra:DR_0548 pilin%2C type IV%2C putative~SPTR: Q9RWW7 Pilin%2C type IV%2C putative gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0713 Trad_0714 Trad_0714 Trad_0714 778380 778586 + putative integral membrane protein KEGG: cms:CMS_2337 putative integral membrane protein~SPTR: B0RGL6 Putative integral membrane protein gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0714 Trad_0715 Trad_0715 Trad_0715 778717 778887 - hypothetical protein KEGG: hypothetical protein LOC726942~SPTR: B9QDQ5 Putative uncharacterized protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0715 Trad_0716 Trad_0716 Trad_0716 778913 779188 - hypothetical protein KEGG: midasin %3B K13093 HIV Tat-specific factor 1~SPTR: B1N4D6 Midasin%2C putative gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0716 Trad_0717 Trad_0717 Trad_0717 779321 780262 - transcriptional regulator%2C ArsR family COGs: COG4189 transcriptional regulator protein~InterPro IPR001845:IPR011991~KEGG: hor:Hore_20640 regulatory protein ArsR~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: B8CZV7 Regulatory protein ArsR~PFAM: Bacterial regulatory protein%2C arsR family gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0717 Trad_0718 Trad_0718 Trad_0718 780728 782590 + glycoside hydrolase family 2 sugar binding protein COGs: COG3250 Beta-galactosidase/beta-glucuronidase~InterProIPR006104:IPR006102:IPR006103:IPR013781:IPR 017853:IPR008979~KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein~PFAM: glycoside hydrolase family 2 sugar binding%3B glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich%3B glycoside hydrolase family 2 TIM barrel~SPTR: Q2Y7N6 Glycoside hydrolase family 2%2C sugar binding~PFAM: Glycosyl hydrolases family 2%2C TIM barrel domain%3B Glycosyl hydrolases family 2%2C sugar binding domain gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0718 Trad_0719 Trad_0719 Trad_0719 782815 784077 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: pjd:Pjdr2_4064 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: C1WM24 Carbohydrate ABC transporter substrate-binding protein%2C CUT1 family~PFAM: Bacterial extracellular solute-binding protein gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0719 Trad_0720 Trad_0720 Trad_0720 784128 785075 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: bcv:Bcav_0647 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C4DJM8 Carbohydrate ABC transporter membrane protein 1%2C CUT1 family~PFAM: Binding-protein-dependent transport system inner membrane component gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0720 Trad_0721 Trad_0721 Trad_0721 785108 785953 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: bcv:Bcav_0646 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C5BY14 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0721 Trad_0722 Trad_0722 Trad_0722 785964 786983 + glycoside hydrolase family 43 COGs: COG3507 Beta-xylosidase~InterPro IPR016840:IPR006710~KEGG: rop:ROP_54980 putative endo-1%2C5-alpha-L-arabinanase~PFAM: glycoside hydrolase family 43~SPTR: Q0S5L5 Probable arabinan endo-1%2C5-alpha-L-arabinosidase~manually curated~PFAM: Glycosyl hydrolases family 43 gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0722 Trad_0723 Trad_0723 Trad_0723 786985 787983 - short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR002198:IPR016040:IPR002347~KEGG: cyc:PCC7424_5709 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B9XRS8 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0723 Trad_0724 Trad_0724 Trad_0724 788455 788946 + protein of unknown function DUF892 COGs: COG3685 conserved hypothetical protein~InterPro IPR010287~KEGG: rlg:Rleg_5592 protein of unknown function DUF892~PFAM: protein of unknown function DUF892~SPTR: B4D2U1 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF892) gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0724 Trad_0725 Trad_0725 Trad_0725 789125 789328 + hypothetical protein KEGG: hypothetical protein~SPTR: C1FH89 Predicted protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0725 Trad_0726 Trad_0726 Trad_0726 789478 790335 + Catalase COGs: COG3546 Mn-containing catalase~InterPro IPR007760:IPR012347:IPR009078~KEGG: dfe:Dfer_1680 catalase~PFAM: manganese containing catalase~PRIAM: Catalase~SPTR: C4D0C0 Mn-containing catalase~PFAM: Manganese containing catalase gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0726 Trad_0727 Trad_0727 Trad_0727 790335 790997 + cyclase/dehydrase COGs: COG5637 integral membrane protein~InterPro IPR005031~KEGG: cyn:Cyan7425_5444 cyclase/dehydrase~PFAM: cyclase/dehydrase~SPTR: B9XGQ2 Cyclase/dehydrase~PFAM: Polyketide cyclase / dehydrase and lipid transport gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0727 Trad_0728 Trad_0728 Trad_0728 791019 792185 + Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterProIPR002328:IPR013154:IPR013149:IPR011032:IPR 016040~KEGG: npu:Npun_R2418 alcohol dehydrogenase~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: A3IUJ9 Zinc-containing alcohol dehydrogenase superfamily protein~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0728 Trad_0729 Trad_0729 Trad_0729 792363 793523 + transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000014:IPR000792:IPR013767:IPR011991:IPR 016032~KEGG: mno:Mnod_6717 transcriptional regulator%2C LuxR family~PFAM: regulatory protein LuxR%3B PAS fold domain protein~SMART: regulatory protein LuxR%3B PAS domain containing protein~SPTR: B8IEY5 Transcriptional regulator%2C LuxR family~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory proteins%2C luxR family%3B PAS fold~TIGRFAM: PAS domain S-box gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0729 Trad_0730 Trad_0730 Trad_0730 793715 794965 + hypothetical protein InterPro IPR011042~KEGG: cyb:CYB_0306 putative lipoprotein~SPTR: Q2JPI3 Putative lipoprotein gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0730 Trad_0731 Trad_0731 Trad_0731 795127 795756 - adenylylsulfate kinase COGs: COG0529 Adenylylsulfate kinase and related kinase~InterPro IPR002891~KEGG: vco:VC0395_A2135 adenylylsulfate kinase~PFAM: adenylylsulfate kinase~PRIAM: Adenylyl-sulfate kinase~SPTR: C1PD91 Adenylyl-sulfate kinase~TIGRFAM: adenylylsulfate kinase~PFAM: Adenylylsulphate kinase~TIGRFAM: adenylylsulfate kinase (apsK) gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0731 Trad_0732 Trad_0732 Trad_0732 795766 796977 - sulfate adenylyltransferase COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase)~InterPro IPR002650:IPR014729:IPR015947~KEGG: syn:slr1165 sulfate adenylyltransferase~PFAM: ATP-sulfurylase~PRIAM: Sulfate adenylyltransferase~SPTR: B5VW77 Sulfate adenylyltransferase~TIGRFAM: sulfate adenylyltransferase~PFAM: ATP-sulfurylase~TIGRFAM: ATP sulphurylase gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0732 Trad_0733 Trad_0733 Trad_0733 797082 797912 - 3'(2')%2C5'-bisphosphate nucleotidase COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase~InterPro IPR006240:IPR020583:IPR020550:IPR000760~KEGG: gvi:gll3645 inositol monophosphatase family protein~PFAM: inositol monophosphatase~SPTR: Q7NF81 Inositol monophosphatase family protein~TIGRFAM: 3'(2')%2C5'-bisphosphate nucleotidase~PFAM: Inositol monophosphatase family~TIGRFAM: 3'(2')%2C5'-bisphosphate nucleotidase%2C bacterial gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0733 Trad_0734 Trad_0734 Trad_0734 797972 799195 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: nml:Namu_5252 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: C1TR22 Glycosyltransferase~PFAM: Glycosyl transferases group 1 gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0734 Trad_0735 Trad_0735 Trad_0735 799192 800418 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: rxy:Rxyl_1938 glycosyl transferase%2C group 1~PFAM: glycosyl transferase group 1~SPTR: Q1AUP3 Glycosyl transferase%2C group 1~PFAM: Glycosyl transferases group 1 gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0735 Trad_0736 Trad_0736 Trad_0736 800415 801611 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: neu:NE2269 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: Q82SN8 Glycosyl transferases group 1~PFAM: Glycosyl transferases group 1 gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0736 Trad_0737 Trad_0737 Trad_0737 801654 802889 - O-antigen polymerase InterPro IPR007016~KEGG: rxy:Rxyl_1940 O-antigen polymerase~PFAM: O-antigen polymerase~SPTR: C1XLK8 Lipid A core-O-antigen ligase-like enyme~PFAM: O-Antigen ligase gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0737 Trad_0738 Trad_0738 Trad_0738 802939 804507 - polysaccharide biosynthesis protein COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid~InterPro IPR002797~KEGG: pla:Plav_1910 polysaccharide biosynthesis protein~PFAM: polysaccharide biosynthesis protein~SPTR: A7HUE2 Polysaccharide biosynthesis protein~PFAM: Polysaccharide biosynthesis protein gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0738 Trad_0739 Trad_0739 Trad_0739 804749 804961 - hypothetical protein KEGG: mpe:MYPE9520 hypothetical protein~SPTR: B9XLC1 Extracellular ligand-binding receptor gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0739 Trad_0740 Trad_0740 Trad_0740 805195 806406 + Adenylosuccinate synthase COGs: COG0104 Adenylosuccinate synthase~InterPro IPR001114:IPR018220~KEGG: dge:Dgeo_0205 adenylosuccinate synthetase~PFAM: adenylosuccinate synthetase~PRIAM: Adenylosuccinate synthase~SMART: adenylosuccinate synthetase~SPTR: Q1J1X6 Adenylosuccinate synthetase~PFAM: Adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthase gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0740 Trad_0741 Trad_0741 Trad_0741 806617 807441 + transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterProIPR000551:IPR015358:IPR010499:IPR009061:IPR 011256~KEGG: ana:all0345 transcriptional regulator~PFAM: regulatory protein MerR%3B Transcription regulator MerR DNA binding%3B transcription activator effector binding~SMART: regulatory protein MerR~SPTR: Q8YZW0 Transcriptional regulator~PFAM: MerR%2C DNA binding%3B MerR family regulatory protein%3B Bacterial transcription activator%2C effector binding domain gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0741 Trad_0742 Trad_0742 Trad_0742 807563 808705 - 2-methylcitrate synthase/citrate synthase II COGs: COG0372 Citrate synthase~InterProIPR011278:IPR019810:IPR002020:IPR016142:IPR 016141~KEGG: bha:BH3160 citrate synthase~PFAM: Citrate synthase~PRIAM: Citrate (Si)-synthase~SPTR: Q9K847 Citrate synthase II~TIGRFAM: 2-methylcitrate synthase/citrate synthase II~PFAM: Citrate synthase~TIGRFAM: 2-methylcitrate synthase/citrate synthase II gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0742 Trad_0743 Trad_0743 Trad_0743 808846 810129 - MgtC/SapB transporter COGs: COG3174 membrane protein~InterPro IPR003416~KEGG: rmr:Rmar_2305 hypothetical protein~PFAM: MgtC/SapB transporter~SPTR: D0MEF6 Putative uncharacterized protein~PFAM: MgtC family gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0743 Trad_0744 Trad_0744 Trad_0744 810148 810321 - pseudogene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0744 Trad_0745 Trad_0745 Trad_0745 810363 811022 - hypothetical protein KEGG: 1110006G14Rik%3B RIKEN cDNA 1110006G14 gene~SPTR: D0DDS9 Putative uncharacterized protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0745 Trad_0746 Trad_0746 Trad_0746 811573 812682 + 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit~InterPro IPR001017~KEGG: tth:TTC1757 2-oxoisovalerate dehydrogenase alpha subunit~PFAM: dehydrogenase E1 component~PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)~SPTR: B7A915 Pyruvate dehydrogenase (Acetyl-transferring)~PFAM: Dehydrogenase E1 component gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0746 Trad_0747 Trad_0747 Trad_0747 812682 813656 + Transketolase central region COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit~InterPro IPR005475:IPR005476:IPR015941:IPR009014~KEGG: ttj:TTHA0230 2-oxoisovalerate dehydrogenase%2C E1 component beta subunit~PFAM: Transketolase central region%3B Transketolase domain protein~SPTR: C1XX73 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dehydrogenase component beta subunit~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0747 Trad_0748 Trad_0748 Trad_0748 813758 815194 + catalytic domain of components of various dehydrogenase complexes COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein~InterProIPR000089:IPR003016:IPR004167:IPR001078:IPR 011053~KEGG: tth:TTC1754 branched-chain alpha-keto acid dehydrogenase subunit E2~PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein~SPTR: C1XX74 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase component~PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)%3B e3 binding domain%3B Biotin-requiring enzyme gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0748 Trad_0749 Trad_0749 Trad_0749 815205 816851 - phosphoglucomutase%2C alpha-D-glucose phosphate-specific COGs: COG0033 Phosphoglucomutase~InterProIPR005852:IPR016066:IPR005844:IPR005845:IPR 005846:IPR005843:IPR016055~KEGG: dma:DMR_25390 phosphoglucomutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase~SPTR: C4XU08 Phosphoglucomutase~TIGRFAM: phosphoglucomutase%2C alpha-D-glucose phosphate-specific~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I~TIGRFAM: phosphoglucomutase%2C alpha-D-glucose phosphate-specific gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0749 Trad_0750 Trad_0750 Trad_0750 817013 817687 + transcriptional regulator%2C LuxR family InterPro IPR000792:IPR011991:IPR016032~KEGG: dge:Dgeo_2791 LuxR family transcriptional regulator~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~SPTR: B7AC48 Transcriptional regulator%2C LuxR family~PFAM: Bacterial regulatory proteins%2C luxR family gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0750 Trad_0751 Trad_0751 Trad_0751 817928 818941 + Redoxin domain protein InterPro IPR017936:IPR013740:IPR012335:IPR012336~KEGG: scl:sce2587 thiol-disulfide oxidoreductase ResA~PFAM: Redoxin domain protein~SPTR: A9G6W3 Thiol-disulfide oxidoreductase resA~PFAM: Redoxin gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0751 Trad_0752 Trad_0752 Trad_0752 819290 821527 + protein of unknown function DUF214 InterPro IPR008162:IPR003838~KEGG: mxa:MXAN_7146 ABC transporter%2C permease protein~PFAM: protein of unknown function DUF214~SPTR: Q1CWG4 ABC transporter%2C permease protein~PFAM: Predicted permease gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0752 Trad_0753 Trad_0753 Trad_0753 821524 822186 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: cvi:CV_4397 ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q7NPU5 Probable ABC transporter%2C ATP-binding protein~PFAM: ABC transporter gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0753 Trad_0754 Trad_0754 Trad_0754 822183 822821 - peptidase M50 COGs: COG1994 Zn-dependent protease~InterPro IPR008915~KEGG: tth:TTC0481 membrane metalloprotease~PFAM: peptidase M50~SPTR: B7A696 Peptidase M50~PFAM: Peptidase family M50 gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0754 Trad_0755 Trad_0755 Trad_0755 822821 823462 - peptidase M50 InterPro IPR008915~KEGG: ttj:TTHA0832 hypothetical protein~PFAM: peptidase M50~SPTR: C1XQS0 Putative uncharacterized protein~PFAM: Peptidase family M50 gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0755 Trad_0756 Trad_0756 Trad_0756 823509 824750 - Polynucleotide adenylyltransferase region COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase~InterPro IPR002646~KEGG: tth:TTC0479 tRNA nucleotidyltransferase~PFAM: Polynucleotide adenylyltransferase region~SPTR: B7A698 Polynucleotide adenylyltransferase region~PFAM: Poly A polymerase head domain gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0756 Trad_0757 Trad_0757 Trad_0757 824815 825288 + tRNA/rRNA methyltransferase (SpoU) COGs: COG0219 rRNA methylase (SpoU class)~InterPro IPR016914:IPR001537~KEGG: ddr:Deide_02610 putative tRNA/rRNA methyltransferase YibK~PFAM: tRNA/rRNA methyltransferase (SpoU)~SPTR: C1CZ32 Putative tRNA/rRNA methyltransferase yibK~PFAM: SpoU rRNA Methylase family~TIGRFAM: rRNA methylase%2C putative%2C group 2 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0757 Trad_0758 Trad_0758 Trad_0758 825306 826367 - peptidase M42 family protein COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: rxy:Rxyl_0738 peptidase M42~PFAM: peptidase M42 family protein~SPTR: Q1AY21 Peptidase M42~PFAM: M42 glutamyl aminopeptidase gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0758 Trad_0759 Trad_0759 Trad_0759 826485 827018 + GCN5-related N-acetyltransferase COGs: COG1247 Sortase and related acyltransferase~InterPro IPR000182:IPR016181~KEGG: gyc:GYMC61_1756 FR47 domain protein~PFAM: GCN5-related N-acetyltransferase~SPTR: B4WVI4 Acetyltransferase%2C GNAT family~PFAM: FR47-like protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0759 Trad_0760 Trad_0760 Trad_0760 827068 828087 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG0492 Thioredoxin reductase~InterPro IPR013027:IPR000103~KEGG: dge:Dgeo_2331 HI0933-like protein protein~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: Q1IVW1 Thioredoxin reductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0760 Trad_0761 Trad_0761 Trad_0761 828168 828812 - endonuclease III COGs: COG0177 EndoIII-related endonuclease~InterProIPR003265:IPR005759:IPR004036:IPR003651:IPR 011257~KEGG: dge:Dgeo_0248 endonuclease III~PFAM: HhH-GPD family protein%3B iron-sulfur cluster loop~PRIAM: DNA-(apurinic or apyrimidinic site) lyase~SMART: HhH-GPD family protein~SPTR: Q1J1T3 Endonuclease III~TIGRFAM: endonuclease III~PFAM: HhH-GPD superfamily base excision DNA repair protein~TIGRFAM: endonuclease III gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0761 Trad_0762 Trad_0762 Trad_0762 828863 829468 + conserved hypothetical protein KEGG: ddr:Deide_21820 hypothetical protein~SPTR: C1XXC8 5-formyltetrahydrofolate cyclo-ligase gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0762 Trad_0763 Trad_0763 Trad_0763 829545 830774 + Type II secretion system F domain protein COGs: COG1459 Type II secretory pathway component PulF~InterPro IPR001992:IPR018076:IPR003004~KEGG: dge:Dgeo_0757 type II secretion system protein~PFAM: Type II secretion system F domain~SPTR: Q1J0C5 Type II secretion system protein~PFAM: Bacterial type II secretion system protein F domain gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0763 Trad_0764 Trad_0764 Trad_0764 831215 833500 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterPro IPR000160:IPR001633:IPR000014:IPR013656~KEGG: azo:azo0565 GGDEF/EAL/PAS/PAC/GAF-domain-containing protein~PFAM: GGDEF domain containing protein%3B PAS fold-4 domain protein%3B EAL domain protein~SMART: GGDEF domain containing protein%3B EAL domain protein~SPTR: A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0764 Trad_0765 Trad_0765 Trad_0765 833720 835318 + Peptidoglycan-binding lysin domain protein COGs: COG1196 Chromosome segregation ATPase~InterPro IPR002482:IPR018392:IPR009053~KEGG: hypothetical protein~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM~SPTR: Q4Q3D8 Putative uncharacterized protein~PFAM: LysM domain gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0765 Trad_0766 Trad_0766 Trad_0766 835412 836389 - PfkB domain protein COGs: COG0524 Sugar kinase ribokinase family~InterPro IPR002173:IPR011611:IPR002139~KEGG: dac:Daci_5591 ribokinase-like domain-containing protein~PFAM: PfkB domain protein~SPTR: A9BXE4 PfkB domain protein~PFAM: pfkB family carbohydrate kinase gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0766 Trad_0767 Trad_0767 Trad_0767 836543 837457 + periplasmic solute binding protein COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin~InterPro IPR006127:IPR006129:IPR006128~KEGG: hha:Hhal_2176 periplasmic solute binding protein~PFAM: periplasmic solute binding protein~SPTR: A1WZ28 Periplasmic solute binding protein~PFAM: Periplasmic solute binding protein family gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0767 Trad_0768 Trad_0768 Trad_0768 837461 838303 + ABC transporter related protein COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: aeh:Mlg_1042 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q0A9U2 ABC transporter related~PFAM: ABC transporter gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0768 Trad_0769 Trad_0769 Trad_0769 838300 839250 + ABC-3 protein COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components~InterPro IPR001626~KEGG: aeh:Mlg_1043 ABC-3 protein~PFAM: ABC-3 protein~SPTR: Q0A9U1 ABC-3 protein~PFAM: ABC 3 transport family gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0769 Trad_0770 Trad_0770 Trad_0770 839257 840003 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR016040:IPR002347~KEGG: pna:Pnap_2744 short chain dehydrogenase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: A1VQW8 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0770 Trad_0771 Trad_0771 Trad_0771 840031 840890 - pseudogene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0771 Trad_0772 Trad_0772 Trad_0772 840924 841055 - oxidoreductase%2C short chain dehydrogenase/reductase family KEGG: kpe:KPK_2514 oxidoreductase%2C short chain dehydrogenase/reductase family~SPTR: B5XX31 Oxidoreductase%2C short chain dehydrogenase/reductase family gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0772 Trad_0773 Trad_0773 Trad_0773 841208 843181 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR003593:IPR003439:IPR017940:IPR001140:IPR 011527~KEGG: dge:Dgeo_0648 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: Q1J0N4 ABC-type transport system%2C ATPase and permease component~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0773 Trad_0774 Trad_0774 Trad_0774 843189 845030 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR003593:IPR003439:IPR017940:IPR018488:IPR 001140:IPR011527~KEGG: dge:Dgeo_0647 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: Q1J0N5 ABC-type multidrug transport system%2C ATPase and permease component~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0774 Trad_0775 Trad_0775 Trad_0775 845276 846157 - esterase COGs: COG3509 Poly(3-hydroxybutyrate) depolymerase~KEGG: scl:sce8927 esterase~SPTR: A6G7K9 Putative lipoprotein~PFAM: Esterase PHB depolymerase gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0775 Trad_0776 Trad_0776 Trad_0776 846250 846522 + conserved hypothetical protein KEGG: tth:TTC1417 hypothetical protein~SPTR: C1XSQ4 Putative uncharacterized protein gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0776 Trad_0777 Trad_0777 Trad_0777 846526 848391 + multi-sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterProIPR003018:IPR005467:IPR011712:IPR003594:IPR 004358~KEGG: dge:Dgeo_1992 multi-sensor signal transduction histidine kinase~PFAM: histidine kinase dimerisation and phosphoacceptor region%3B GAF domain protein%3B ATP-binding region ATPase domain protein~SMART: GAF domain protein~SPTR: Q1IWU8 Multi-sensor signal transduction histidine kinase~PFAM: Histidine kinase%3B GAF domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0777 Trad_0778 Trad_0778 Trad_0778 848694 848906 - conserved hypothetical protein KEGG: scl:sce1000 hypothetical protein~SPTR: A9EV36 Putative uncharacterized protein gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0778 Trad_0779 Trad_0779 Trad_0779 849053 849271 - ribosomal protein L31 COGs: COG0254 Ribosomal protein L31~InterPro IPR002150~KEGG: dge:Dgeo_0577 50S ribosomal protein L31~PFAM: ribosomal protein L31~SPTR: C1XQ87 50S ribosomal protein L31~TIGRFAM: ribosomal protein L31~PFAM: Ribosomal protein L31~TIGRFAM: ribosomal protein L31 gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0779 Trad_0780 Trad_0780 Trad_0780 849345 852113 - ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC COGs: COG0474 Cation transport ATPase~InterProIPR001757:IPR018303:IPR004014:IPR008250:IPR 005834:IPR006068:IPR000695~KEGG: pmy:Pmen_1123 ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: A4XRC4 ATPase%2C P-type (Transporting)%2C HAD superfamily%2C subfamily IC~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B Cation transporting ATPase%2C C-terminus%3B haloacid dehalogenase-like hydrolase%3B Cation transporter/ATPase%2C N-terminus~TIGRFAM: plasma-membrane calcium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B potassium and/or sodium efflux P-type ATPase%2C fungal-type gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0780 Trad_0781 Trad_0781 Trad_0781 852348 853616 + nucleoside transporter COGs: COG1972 Nucleoside permease~InterPro IPR018270:IPR002668:IPR011642:IPR011657~KEGG: eat:EAT1b_0777 nucleoside transporter~PFAM: Na+ dependent nucleoside transporter domain protein%3B Na+ dependent nucleoside transporter%3B nucleoside recognition domain protein~SPTR: C4L4W3 Nucleoside transporter~TIGRFAM: nucleoside transporter~PFAM: Na+ dependent nucleoside transporter C-terminus%3B Na+ dependent nucleoside transporter N-terminus%3B Nucleoside recognition~TIGRFAM: nucleoside transporter gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0781 Trad_0782 Trad_0782 Trad_0782 853681 854115 - Fe-S metabolism associated SufE COGs: COG2166 SufE protein probably involved in Fe-S center assembly~InterPro IPR003808~KEGG: dge:Dgeo_2207 Fe-S metabolism associated SufE~PFAM: Fe-S metabolism associated SufE~SPTR: C1XPZ4 SufE protein probably involved in Fe-S center assembly~PFAM: Fe-S metabolism associated domain gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0782 Trad_0783 Trad_0783 Trad_0783 854247 855533 + 3-phosphoshikimate 1-carboxyvinyltransferase COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase~InterPro IPR006264:IPR016228:IPR001986:IPR013792~KEGG: sti:Sthe_0979 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~SPTR: A4A1M9 3-phosphoshikimate 1-carboxyvinyltransferase~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0783 Trad_0784 Trad_0784 Trad_0784 855530 856258 + cytidylate kinase COGs: COG0283 Cytidylate kinase~InterPro IPR003136:IPR011994~KEGG: ddr:Deide_22220 putative cytidylate kinase (cytidine monophosphate kinase%2C deoxycytidine kinase%2C deoxycytidylate kinase)~PFAM: cytidylate kinase region~SPTR: B7ABT4 Cytidylate kinase~TIGRFAM: cytidylate kinase~PFAM: Cytidylate kinase~TIGRFAM: cytidylate kinase gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0784 Trad_0785 Trad_0785 Trad_0785 856343 857260 + ATP-NAD/AcoX kinase COGs: COG0061 sugar kinase~InterPro IPR002504:IPR017438:IPR017437:IPR016064~KEGG: gsu:GSU2065 ATP-NAD kinase~PFAM: ATP-NAD/AcoX kinase~SPTR: Q74BH6 Probable inorganic polyphosphate/ATP-NAD kinase~PFAM: ATP-NAD kinase gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0785 Trad_0786 Trad_0786 Trad_0786 857918 858496 + diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: gem:GM21_0918 diguanylate cyclase with PAS/PAC sensor~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein~SPTR: C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0786 Trad_0787 Trad_0787 Trad_0787 858769 859377 + methyltransferase type 11 KEGG: chl:Chy400_2116 methyltransferase type 11~SPTR: B9LGR4 Methyltransferase type 11 gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0787 Trad_0788 Trad_0788 Trad_0788 859418 860596 + conserved hypothetical protein COGs: COG4370 conserved hypothetical protein~InterPro IPR019994~KEGG: dra:DR_2625 hypothetical protein~SPTR: C1XU31 Uncharacterized conserved protein~TIGRFAM: conserved hypothetical protein~TIGRFAM: conserved hypothetical protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0788 Trad_0789 Trad_0789 Trad_0789 860740 861933 + hypothetical protein KEGG: ter:Tery_2593 periplasmic protein TonB links inner and outer membranes-like~SPTR: Q111N4 Periplasmic protein TonB links inner and outer membranes-like gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0789 Trad_0790 Trad_0790 Trad_0790 861923 862369 + hypothetical protein KEGG: cak:Caul_3327 major facilitator transporter~SPTR: B0T4S7 Major facilitator superfamily MFS_1 gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0790 Trad_0791 Trad_0791 Trad_0791 862403 863074 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867:IPR011006~KEGG: rca:Rcas_2487 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: A7NM12 Two component transcriptional regulator%2C winged helix family~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0791 Trad_0792 Trad_0792 Trad_0792 863087 864046 - Ribosylpyrimidine nucleosidase COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase~InterPro IPR015910:IPR001910~KEGG: etr:ETAE_2636 ribonucleoside hydrolase 1~PFAM: Inosine/uridine-preferring nucleoside hydrolase~PRIAM: Ribosylpyrimidine nucleosidase~SPTR: D0ZCD2 Ribonucleoside hydrolase 1~PFAM: Inosine-uridine preferring nucleoside hydrolase gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0792 Trad_0793 Trad_0793 Trad_0793 864064 864522 + hypothetical protein KEGG: fba:FIC_02086 hypothetical protein~SPTR: A2TU17 Putative uncharacterized protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0793 Trad_0794 Trad_0794 Trad_0794 864606 865382 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR016040:IPR002347~KEGG: cyc:PCC7424_0520 3-ketoacyl-(acyl-carrier-protein) reductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B7KDG3 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0794 Trad_0795 Trad_0795 Trad_0795 865479 865871 + protein of unknown function DUF1486 InterPro IPR009959~KEGG: ddr:Deide_04930 hypothetical protein~PFAM: protein of unknown function DUF1486~SPTR: C1D0F3 Putative uncharacterized protein~PFAM: SnoaL-like polyketide cyclase gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0795 Trad_0796 Trad_0796 Trad_0796 866013 866489 - conserved hypothetical protein KEGG: rlg:Rleg_0778 hypothetical protein~SPTR: Q1MK49 Putative uncharacterized protein gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0796 Trad_0797 Trad_0797 Trad_0797 866612 867055 - Protein of unknown function DUF2383 InterPro IPR011971:IPR016920:IPR019052~KEGG: aav:Aave_1446 hypothetical protein~PFAM: Protein of unknown function DUF2383~SPTR: A4VP43 NAD-dependent aldehyde dehydrogenase~PFAM: Domain of unknown function (DUF2383)~TIGRFAM: conserved hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0797 Trad_0798 Trad_0798 Trad_0798 867309 868109 - Redoxin domain protein COGs: COG0526 Thiol-disulfide isomerase and thioredoxins~InterProIPR017936:IPR017937:IPR013740:IPR012335:IPR 012336~KEGG: ttj:TTHA0840 thiol:disulfide interchange protein~PFAM: Redoxin domain protein~SPTR: Q72KI7 Thiol:disulfide interchange protein tlpA~manually curated~PFAM: Redoxin gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0798 Trad_0799 Trad_0799 Trad_0799 868119 868679 - Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: ttj:TTHA0483 ArsR family transcriptional regulator~PFAM: Methyltransferase type 11~SPTR: B7A6S3 Methyltransferase type 11~PFAM: Methyltransferase domain gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0799 Trad_0800 Trad_0800 Trad_0800 868786 869082 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: dra:DR_A0156 hypothetical protein~PFAM: protein of unknown function DUF156~SPTR: C1XGD7 Uncharacterized conserved protein~PFAM: Uncharacterised BCR%2C COG1937 gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0800 Trad_0801 Trad_0801 Trad_0801 869082 869561 - protein of unknown function DUF395 YeeE/YedE InterPro IPR007272~KEGG: dra:DR_A0163 hypothetical protein~PFAM: protein of unknown function DUF395 YeeE/YedE~SPTR: C1XNK5 YeeE/YedE family protein (DUF395)~PFAM: YeeE/YedE family (DUF395) gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0801 Trad_0802 Trad_0802 Trad_0802 869562 870134 - protein of unknown function DUF395 YeeE/YedE InterPro IPR007272~KEGG: rmr:Rmar_0269 protein of unknown function DUF395 YeeE/YedE~PFAM: protein of unknown function DUF395 YeeE/YedE~SPTR: D0MDI2 Putative uncharacterized protein~PFAM: YeeE/YedE family (DUF395) gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0802 Trad_0803 Trad_0803 Trad_0803 870397 870756 - membrane protein of unknown function COGs: COG1950 membrane protein~InterPro IPR007165~KEGG: ddr:Deide_07630 hypothetical protein~PFAM: membrane protein of unknown function~SPTR: C1XRX4 Predicted membrane protein%2C COG1950~PFAM: Membrane protein of unknown function gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0803 Trad_0804 Trad_0804 Trad_0804 870826 871716 - hypothetical protein InterPro IPR016181~KEGG: aav:Aave_3841 aminotransferase~SPTR: A1TTU8 Aminotransferase gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0804 Trad_0805 Trad_0805 Trad_0805 871872 872420 + transcriptional regulator%2C LuxR family InterPro IPR000792:IPR011991:IPR016032~KEGG: dge:Dgeo_2791 LuxR family transcriptional regulator~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~SPTR: Q1J2R1 Transcriptional regulator%2C LuxR family~PFAM: Bacterial regulatory proteins%2C luxR family gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0805 Trad_0806 Trad_0806 Trad_0806 872563 873660 + hypothetical protein InterPro IPR017936:IPR012335:IPR012336~KEGG: mag:amb2914 thiol-disulfide isomerase and thioredoxins~SPTR: Q2W357 Thiol-disulfide isomerase and thioredoxins gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0806 Trad_0807 Trad_0807 Trad_0807 873657 875804 + hypothetical protein KEGG: bfa:Bfae_20480 ABC-type transport system%2C involved in lipoprotein release%2C permease component~SPTR: C7ME48 ABC-type transport system%2C involved in lipoprotein release%2C permease component~PFAM: Predicted permease gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0807 Trad_0808 Trad_0808 Trad_0808 875805 876509 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: afo:Afer_1310 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C7LZT2 ABC transporter related~PFAM: ABC transporter gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0808 Trad_0809 Trad_0809 Trad_0809 876670 877746 + phospho-2-dehydro-3-deoxyheptonate aldolase COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase~InterPro IPR006219:IPR006218:IPR013785~KEGG: dra:DR_1817 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA~PRIAM: 3-deoxy-7-phosphoheptulonate synthase~SPTR: Q9RTE8 Phospho-2-dehydro-3-deoxyheptonate aldolase~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I family~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0809 Trad_0810 Trad_0810 Trad_0810 877856 878380 + Protein of unknown function methylase putative COGs: COG0742 N6-adenine-specific methylase~InterPro IPR004398:IPR016065~KEGG: ttj:TTHA0928 methyltransferase~PFAM: Protein of unknown function methylase putative~SPTR: B7A7F2 Putative uncharacterized protein~PFAM: Conserved hypothetical protein 95~TIGRFAM: RNA methyltransferase%2C RsmD family gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0810 Trad_0811 Trad_0811 Trad_0811 878373 879845 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701:IPR016196:IPR001411~KEGG: rxy:Rxyl_1058 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Q1AX54 Major facilitator superfamily MFS_1~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0811 Trad_0812 Trad_0812 Trad_0812 880091 883045 + preprotein translocase%2C SecA subunit COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase)~InterProIPR000185:IPR014018:IPR011115:IPR011130:IPR 011116:IPR004027~KEGG: dge:Dgeo_1058 preprotein translocase subunit SecA~PFAM: SecA DEAD domain protein%3B SecA preprotein cross-linking region%3B SecA Wing and Scaffold%3B SEC-C motif domain protein~SPTR: Q1IZH7 Protein translocase subunit secA~TIGRFAM: preprotein translocase%2C SecA subunit~PFAM: SecA DEAD-like domain%3B SecA preprotein cross-linking domain%3B SEC-C motif%3B SecA Wing and Scaffold domain~TIGRFAM: preprotein translocase%2C SecA subunit gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0812 Trad_0813 Trad_0813 Trad_0813 883161 883292 - hypothetical protein gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0813 Trad_0814 Trad_0814 Trad_0814 883427 884317 + orotidine 5'-phosphate decarboxylase COGs: COG0284 Orotidine-5'-phosphate decarboxylase~InterProIPR011995:IPR018089:IPR001754:IPR013785:IPR 011060~KEGG: rba:RB12661 orotidine 5-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase~PRIAM: Orotidine-5'-phosphate decarboxylase~SPTR: A3ZXE6 Orotidine 5'-phosphate decarboxylase~TIGRFAM: orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family~TIGRFAM: orotidine 5'-phosphate decarboxylase%2C subfamily 2 gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0814 Trad_0815 Trad_0815 Trad_0815 884318 885238 - hypothetical protein KEGG: nfa:nfa16940 putative transcriptional regulator~SPTR: Q5YZ51 Putative transcriptional regulator gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0815 Trad_0816 Trad_0816 Trad_0816 885310 886197 - hypothetical protein KEGG: xac:XAC2111 ribonuclease E~SPTR: C8ZAR8 Muc1p gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0816 Trad_0817 Trad_0817 Trad_0817 886277 887884 - DAK2 domain fusion protein YloV COGs: COG1461 kinase related to dihydroxyacetone kinase~InterPro IPR019986:IPR004007~KEGG: ddr:Deide_17580 putative Dak phosphatase~PFAM: Dak phosphatase~SPTR: C1XV24 Predicted kinase%2C dihydroxyacetone kinase~TIGRFAM: DAK2 domain fusion protein YloV~PFAM: DAK2 domain~TIGRFAM: DAK2 domain fusion protein YloV gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0817 Trad_0818 Trad_0818 Trad_0818 887871 888323 - protein of unknown function DUF322 COGs: COG1302 conserved hypothetical protein~InterPro IPR005531~KEGG: dge:Dgeo_1721 hypothetical protein~PFAM: protein of unknown function DUF322~SPTR: B7AC20 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF322) gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0818 Trad_0819 Trad_0819 Trad_0819 888466 888777 - protein of unknown function DUF503 COGs: COG1550 conserved hypothetical protein~InterPro IPR007546~KEGG: dra:DR_1478 hypothetical protein~PFAM: protein of unknown function DUF503~SPTR: Q9RUB3 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF503) gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0819 Trad_0820 Trad_0820 Trad_0820 888781 889224 - Protein of unknown function DUF1999 InterPro IPR018987~KEGG: ttj:TTHA1254 hypothetical protein~PFAM: Protein of unknown function DUF1999~SPTR: Q72J89 Fe-S binding reductase%2C putative~PFAM: Protein of unknown function (DUF1999) gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0820 Trad_0821 Trad_0821 Trad_0821 889212 889673 - molybdenum cofactor biosynthesis protein C COGs: COG0315 Molybdenum cofactor biosynthesis enzyme~InterPro IPR002820~KEGG: ttj:TTHA1789 molybdenum cofactor biosynthesis protein C~PFAM: molybdopterin cofactor biosynthesis MoaC region~SPTR: B7A992 Molybdenum cofactor biosynthesis protein C~TIGRFAM: molybdenum cofactor biosynthesis protein C~PFAM: MoaC family~TIGRFAM: molybdenum cofactor biosynthesis protein MoaC gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0821 Trad_0822 Trad_0822 Trad_0822 889682 890464 - tRNA pseudouridine synthase A COGs: COG0101 Pseudouridylate synthase~InterProIPR001406:IPR020097:IPR020094:IPR020095:IPR 020103~KEGG: dge:Dgeo_0037 tRNA pseudouridine synthase A~PFAM: Pseudouridine synthase I%2C TruA%2C alpha/beta domain~SPTR: C1XI54 Pseudouridylate synthase~TIGRFAM: tRNA pseudouridine synthase A~PFAM: tRNA pseudouridine synthase~TIGRFAM: pseudouridylate synthase I gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0822 Trad_0823 Trad_0823 Trad_0823 890451 891332 - phosphoesterase PA-phosphatase related protein InterPro IPR000326:IPR016118~KEGG: hau:Haur_4970 phosphoesterase PA-phosphatase related~PFAM: phosphoesterase PA-phosphatase related~SMART: phosphoesterase PA-phosphatase related~SPTR: C1XUY7 PAP2 superfamily protein~PFAM: PAP2 superfamily gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0823 Trad_0824 Trad_0824 Trad_0824 891681 892859 + Alpha-galactosidase%2C NPCBM associated NEW3 domain protein COGs: COG1470 membrane protein~InterPro IPR018905~KEGG: ttj:TTHA1458 hypothetical protein~PFAM: Alpha-galactosidase%2C NPCBM associated NEW3 domain~SPTR: C1XUD9 Predicted membrane protein%2C COG1470~PFAM: NPCBM-associated%2C NEW3 domain of alpha-galactosidase gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0824 Trad_0825 Trad_0825 Trad_0825 892880 893890 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: ttj:TTHA1459 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q5SIB5 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0825 Trad_0826 Trad_0826 Trad_0826 893877 894845 + ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component~KEGG: rca:Rcas_0725 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein~SPTR: C1XUD7 ABC-type transport system involved in multi-copper enzyme maturation%2C permease component gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0826 Trad_0827 Trad_0827 Trad_0827 894871 895740 - transglutaminase domain protein COGs: COG1305 Transglutaminase-like protein~InterPro IPR002931:IPR013589~KEGG: dra:DR_1993 hypothetical protein~PFAM: transglutaminase domain protein%3B transglutaminase domain protein~SMART: transglutaminase domain protein~SPTR: C1XNA7 Transglutaminase-like enzyme%2C predicted cysteine protease~PFAM: Transglutaminase-like superfamily%3B Bacterial transglutaminase-like N-terminal region gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0827 Trad_0828 Trad_0828 Trad_0828 895805 897358 - anion transporter COGs: COG0471 Di- and tricarboxylate transporter~InterPro IPR001898~KEGG: cps:CPS_2009 anion transporter~PFAM: sodium/sulphate symporter~SPTR: Q483M7 Anion transporter~TIGRFAM: anion transporter~PFAM: Sodium:sulfate symporter transmembrane region~TIGRFAM: anion transporter gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0828 Trad_0829 Trad_0829 Trad_0829 897530 898336 + protein of unknown function DUF72 COGs: COG1801 conserved hypothetical protein~InterPro IPR002763~KEGG: dge:Dgeo_1898 hypothetical protein~PFAM: protein of unknown function DUF72~SPTR: C1XRA1 Uncharacterized conserved protein~PFAM: Protein of unknown function DUF72 gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0829 Trad_0830 Trad_0830 Trad_0830 898418 900949 + DNA mismatch repair protein MutS COGs: COG0249 Mismatch repair ATPase (MutS family)~InterProIPR007696:IPR000432:IPR005748:IPR007695:IPR 007860:IPR007861:IPR016151~KEGG: ttj:TTHA1324 DNA mismatch repair protein MutS~PFAM: MutS III domain protein%3B DNA mismatch repair protein MutS domain protein%3B MutS II domain protein%3B MutS IV domain protein~SMART: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein~SPTR: C1XLD7 DNA mismatch repair protein MutS~TIGRFAM: DNA mismatch repair protein MutS~PFAM: MutS family domain IV%3B MutS domain II%3B MutS domain V%3B MutS domain I%3B MutS domain III~TIGRFAM: DNA mismatch repair protein MutS gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0830 Trad_0831 Trad_0831 Trad_0831 900949 902625 + DNA mismatch repair protein MutL COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase)~InterProIPR014763:IPR014762:IPR003594:IPR013507:IPR 014790:IPR020568~KEGG: dra:DR_1696 DNA mismatch repair protein MutL~PFAM: MutL dimerisation%3B DNA mismatch repair protein domain protein%3B ATP-binding region ATPase domain protein~SPTR: C1XUP7 DNA mismatch repair protein MutL~TIGRFAM: DNA mismatch repair protein MutL~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B MutL C terminal dimerisation domain%3B DNA mismatch repair protein%2C C-terminal domain~TIGRFAM: DNA mismatch repair protein MutL gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0831 Trad_0832 Trad_0832 Trad_0832 902726 903550 + hypothetical protein InterPro IPR011006~KEGG: dal:Dalk_2362 response regulator receiver protein~SPTR: C1XNX7 Putative uncharacterized protein gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0832 Trad_0833 Trad_0833 Trad_0833 903698 904561 + ribonuclease BN COGs: COG1295 membrane protein~InterPro IPR004664~KEGG: hau:Haur_3921 putative ribonuclease BN~PFAM: ribonuclease BN~SPTR: A9AUW7 Putative ribonuclease BN~PFAM: Ribonuclease BN-like family~TIGRFAM: YihY family protein (not ribonuclease BN) gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0833 Trad_0834 Trad_0834 Trad_0834 904558 904899 - hypothetical protein KEGG: scl:sce5081 TPR repeat-containing protein~SPTR: A9FR14 Putative uncharacterized protein gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0834 Trad_0835 Trad_0835 Trad_0835 905030 906052 + deoxyribose-phosphate aldolase COGs: COG0274 Deoxyribose-phosphate aldolase~InterPro IPR011343:IPR002915:IPR013785~KEGG: rsq:Rsph17025_3349 ribokinase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~PRIAM: Deoxyribose-phosphate aldolase~SPTR: A4WXW6 Ribokinase~TIGRFAM: deoxyribose-phosphate aldolase~PFAM: DeoC/LacD family aldolase~TIGRFAM: deoxyribose-phosphate aldolase gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0835 Trad_0836 Trad_0836 Trad_0836 906063 906317 + hypothetical protein KEGG: sez:Sez_1652 transposase IS4-like~SPTR: B4U4R6 Transposase IS4-like gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0836 Trad_0837 Trad_0837 Trad_0837 906317 906715 + PilT protein domain protein COGs: COG1487 nucleic acid-binding protein contains PIN domain~InterPro IPR002716~KEGG: dra:DR_2102 plasmid stability protein%2C putative~PFAM: PilT protein domain protein~SPTR: Q9RSM2 Plasmid stability protein%2C putative~PFAM: PIN domain gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0837 Trad_0838 Trad_0838 Trad_0838 906716 907285 + GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR000182:IPR016181~KEGG: gwc:GWCH70_0239 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: C5D4G1 GCN5-related N-acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0838 Trad_0839 Trad_0839 Trad_0839 907521 907748 + zinc-binding alcohol dehydrogenase KEGG: msm:MSMEG_4064 zinc-binding alcohol dehydrogenase~SPTR: A0QZL1 Zinc-binding alcohol dehydrogenase gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0839 Trad_0840 Trad_0840 Trad_0840 907745 910183 + Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterProIPR011408:IPR016160:IPR015590:IPR016162:IPR 016161~KEGG: gau:GAU_2061 putative aldehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: C1A9C6 Putative aldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase family gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0840 Trad_0841 Trad_0841 Trad_0841 910226 911233 - proline racemase COGs: COG3938 Proline racemase~InterPro IPR008794~KEGG: bur:Bcep18194_B1660 proline racemase~PFAM: proline racemase~PRIAM: Proline racemase~SPTR: Q395T7 Proline racemase~PFAM: Proline racemase gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0841 Trad_0842 Trad_0842 Trad_0842 911344 912372 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: ddr:Deide_3p01930 putative NADH-dependent dyhydrogenase%2C putative inositol 2-dehydrogenase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C1XNY5 Predicted dehydrogenase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0842 Trad_0843 Trad_0843 Trad_0843 912372 913382 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: bbe:BBR47_17150 putative oxidoreductase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C1XNY6 Predicted dehydrogenase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0843 Trad_0844 Trad_0844 Trad_0844 913584 914408 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: mlo:mlr4774 sugar transport inner membrane protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q98DB6 Sugar transport inner membrane protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0844 Trad_0845 Trad_0845 Trad_0845 914405 915334 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: ddr:Deide_3p01950 putative sugar ABC transporter%2C permease component%2C putative sn-glycerol-3-phosphate transport system permease protein UgpA~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XNY2 Carbohydrate ABC transporter membrane protein 1%2C CUT1 family~PFAM: Binding-protein-dependent transport system inner membrane component gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0845 Trad_0846 Trad_0846 Trad_0846 915418 916668 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006061:IPR006059~KEGG: sil:SPO1839 sugar ABC transporter%2C periplasmic sugar-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q5LSC9 Sugar ABC transporter%2C periplasmic sugar-binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0846 Trad_0847 Trad_0847 Trad_0847 916840 918207 - amine oxidase COGs: COG1231 Monoamine oxidase~InterPro IPR002937:IPR001613~KEGG: mar:MAE_40250 putative flavin-containing monoamine oxidase~PFAM: amine oxidase~SPTR: B0JQX8 Putative flavin-containing monoamine oxidase~PFAM: Flavin containing amine oxidoreductase gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0847 Trad_0848 Trad_0848 Trad_0848 918399 919490 - acyl-CoA dehydrogenase domain protein COGs: COG1960 Acyl-CoA dehydrogenase~InterProIPR006091:IPR006090:IPR013786:IPR013764:IPR 009100:IPR009075~KEGG: rrs:RoseRS_0478 acyl-CoA dehydrogenase domain-containing protein~PFAM: acyl-CoA dehydrogenase domain protein~SPTR: A5UQK0 Acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA dehydrogenase%2C C-terminal domain%3B Acyl-CoA dehydrogenase%2C middle domain%3B Acyl-CoA dehydrogenase%2C N-terminal domain gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0848 Trad_0849 Trad_0849 Trad_0849 919508 920506 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: gym:GYMC10_2308 oxidoreductase domain protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C6CRB8 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0849 Trad_0850 Trad_0850 Trad_0850 920578 921342 - 2-phosphoglycerate kinase COGs: COG2074 2-phosphoglycerate kinase~KEGG: ddr:Deide_06610 putative phosphoglycerate kinase~SPTR: C1D0Z1 Putative phosphoglycerate kinase gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0850 Trad_0851 Trad_0851 Trad_0851 921464 922198 - MgtC/SapB transporter COGs: COG1285 membrane protein~InterPro IPR003416~KEGG: bbt:BBta_1557 putative MgtC-magnesium transport family protein~PFAM: MgtC/SapB transporter~SPTR: A5EC79 Putative MgtC-magnesium transport family protein~PFAM: MgtC family gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0851 Trad_0852 Trad_0852 Trad_0852 922484 923911 - magnesium transporter COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)~InterPro IPR000644:IPR006669:IPR006668:IPR006667~KEGG: cyb:CYB_2114 magnesium transporter~PFAM: MgtE intracellular region%3B CBS domain containing protein%3B MgtE integral membrane region~SMART: CBS domain containing protein~SPTR: Q2JJU7 Magnesium transporter~TIGRFAM: magnesium transporter~PFAM: MgtE intracellular N domain%3B CBS domain%3B Divalent cation transporter~TIGRFAM: Mg2+ transporter (mgtE) gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0852 Trad_0853 Trad_0853 Trad_0853 924320 925486 + galactokinase COGs: COG0153 Galactokinase~InterProIPR000705:IPR019741:IPR006203:IPR019539:IPR 006204:IPR013750:IPR014721:IPR020568:IPR006206~KEGG: hoh:Hoch_2692 galactokinase~PFAM: Galactokinase galactose-binding domain%3B GHMP kinase%3B GHMP kinase domain protein~PRIAM: Galactokinase~SPTR: D0LM44 Galactokinase~TIGRFAM: galactokinase~PFAM: Galactokinase galactose-binding signature%3B GHMP kinases C terminal%3B GHMP kinases N terminal domain~TIGRFAM: galactokinase gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0853 Trad_0854 Trad_0854 Trad_0854 925483 926457 - cobalamin synthesis protein P47K COGs: COG0523 Putative GTPase (G3E family)~InterPro IPR003495:IPR011629~KEGG: ddr:Deide_00450 putative cobalamin synthesis protein%2C P47K~PFAM: cobalamin synthesis protein P47K%3B cobalamin synthesis CobW domain protein~SPTR: C1XQL9 Predicted GTPase%2C G3E family~PFAM: CobW/HypB/UreG%2C nucleotide-binding domain%3B Cobalamin synthesis protein cobW C-terminal domain gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0854 Trad_0855 Trad_0855 Trad_0855 926499 927731 - YibE/F family protein COGs: COG5438 multitransmembrane protein~InterPro IPR019780:IPR012507~KEGG: tth:TTC0924 hypothetical protein~PFAM: YibE/F family protein~SPTR: B7A9Z4 YibE/F family protein~PFAM: YibE/F-like protein gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0855 Trad_0856 Trad_0856 Trad_0856 927885 928151 + ribosomal protein L28 InterPro IPR001383~KEGG: ddr:Deide_07340 putative 50S ribosomal protein L28~PFAM: ribosomal protein L28~SPTR: C1D168 Putative 50S ribosomal protein L28~TIGRFAM: ribosomal protein L28~PFAM: Ribosomal L28 family~TIGRFAM: ribosomal protein L28 gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0856 Trad_0857 Trad_0857 Trad_0857 928193 929095 + periplasmic solute binding protein COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin~InterPro IPR006127:IPR006128~KEGG: rxy:Rxyl_1141 periplasmic solute binding protein~PFAM: periplasmic solute binding protein~SPTR: Q1AWX1 Periplasmic solute binding protein~PFAM: Periplasmic solute binding protein family gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0857 Trad_0858 Trad_0858 Trad_0858 929156 929899 + ABC transporter related protein COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: ttj:TTHA0453 Mn2+/Zn2+ ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XUH4 ATPase component of Mn/Zn ABC-type transporter~PFAM: ABC transporter gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0858 Trad_0859 Trad_0859 Trad_0859 929957 930871 + ABC-3 protein COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components~InterPro IPR001626~KEGG: ttj:TTHA0454 Mn2+/Zn2+ ABC transporter%2C permease protein~PFAM: ABC-3 protein~SPTR: C1XK44 ABC-type Mn2+/Zn2+ transport system%2C permease component~PFAM: ABC 3 transport family gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0859 Trad_0860 Trad_0860 Trad_0860 930940 931254 + nucleolar RNA helicase II KEGG: nucleolar RNA helicase II~SPTR: A4H460 Nucleolar RNA helicase II%2C putative gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0860 Trad_0861 Trad_0861 Trad_0861 931251 931466 + hypothetical protein KEGG: mno:Mnod_4083 HNH endonuclease gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0861 Trad_0862 Trad_0862 Trad_0862 931874 932158 - hypothetical protein KEGG: cyn:Cyan7425_4710 hypothetical protein~SPTR: C5C7I3 Putative uncharacterized protein gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0862 Trad_0863 Trad_0863 Trad_0863 932238 934052 - UbiD family decarboxylase COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase~InterPro IPR002830~KEGG: dra:DR_0332 hypothetical protein~PFAM: Carboxylyase-related protein~SPTR: Q9RXI1 Putative uncharacterized protein~TIGRFAM: UbiD family decarboxylase~PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~TIGRFAM: UbiD family decarboxylases gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0863 Trad_0864 Trad_0864 Trad_0864 934191 934766 + maf protein COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation~InterPro IPR003697~KEGG: sat:SYN_00572 putative inhibitor of septum formation protein~PFAM: Maf family protein~SPTR: Q2LSD6 Maf-like protein SYNAS_11200~TIGRFAM: maf protein~PFAM: Maf-like protein~TIGRFAM: MAF protein gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0864 Trad_0865 Trad_0865 Trad_0865 934892 935176 + ribosomal protein S20 InterPro IPR002583~KEGG: dra:DR_1309 30S ribosomal protein S20~PFAM: ribosomal protein S20~SPTR: C1XSK6 SSU ribosomal protein S20P~TIGRFAM: ribosomal protein S20~PFAM: Ribosomal protein S20~TIGRFAM: ribosomal protein S20 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0865 Trad_0866 Trad_0866 Trad_0866 935264 935596 - DNA-binding protein KEGG: eli:ELI_09660 DNA-binding protein~SPTR: C1YUV7 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3140) gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0866 Trad_0867 Trad_0867 Trad_0867 935626 936210 - oxidoreductase molybdopterin binding protein COGs: COG2041 Sulfite oxidase~InterPro IPR000572~KEGG: ddr:Deide_17540 putative oxidoreductase molybdopterin binding~PFAM: oxidoreductase molybdopterin binding~SPTR: C1CX10 Putative oxidoreductase molybdopterin binding~PFAM: Oxidoreductase molybdopterin binding domain gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0867 Trad_0868 Trad_0868 Trad_0868 936281 937027 + RNA methyltransferase%2C TrmH family%2C group 1 COGs: COG0565 rRNA methylase~InterPro IPR004384:IPR002345:IPR001537~KEGG: dra:DR_0576 RNA methyltransferase%2C putative~PFAM: tRNA/rRNA methyltransferase (SpoU)~SPTR: Q9RWT9 RNA methyltransferase%2C putative~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 1~PFAM: SpoU rRNA Methylase family~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 1 gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0868 Trad_0869 Trad_0869 Trad_0869 937572 938261 - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin COGs: COG1876 D-alanyl-D-alanine carboxypeptidase~InterPro IPR003709:IPR009045~KEGG: sth:STH1075 putative D-alanyl-D-alanine carboxypeptidase~PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin~SPTR: Q67QI3 Putative D-alanyl-D-alanine carboxypeptidase~PFAM: D-alanyl-D-alanine carboxypeptidase gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0869 Trad_0870 Trad_0870 Trad_0870 938266 938790 - copper resistance protein CopC InterPro IPR007348:IPR014755:IPR014756~KEGG: ddr:Deide_3p01290 putative copper resistance protein CopC%2C precursor~PFAM: copper resistance protein CopC~SPTR: C1XSI0 Uncharacterized protein similar to copper resistance protein CopC~PFAM: Copper resistance protein CopC gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0870 Trad_0871 Trad_0871 Trad_0871 938787 940100 - Cytochrome-c peroxidase COGs: COG1858 Cytochrome c peroxidase~InterPro IPR009056:IPR004852:IPR003088~KEGG: hoh:Hoch_3799 cytochrome-c peroxidase~PFAM: Di-haem cytochrome c peroxidase%3B cytochrome c class I~PRIAM: Cytochrome-c peroxidase~SPTR: D0LYE9 Cytochrome-c peroxidase~PFAM: Di-haem cytochrome c peroxidase gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0871 Trad_0872 Trad_0872 Trad_0872 940155 941081 - conserved hypothetical protein KEGG: ava:Ava_B0146 hypothetical protein~SPTR: B4WKY8 Putative uncharacterized protein gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0872 Trad_0873 Trad_0873 Trad_0873 941144 941965 - copper resistance D domain protein InterPro IPR018130:IPR008457~KEGG: rrs:RoseRS_1500 copper resistance protein CopC~PFAM: copper resistance D domain protein~SPTR: C1XK37 Putative copper export protein~PFAM: Copper resistance protein D gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0873 Trad_0874 Trad_0874 Trad_0874 941971 942441 - copper resistance protein CopC COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC~InterPro IPR007348:IPR014755:IPR014756~KEGG: ddr:Deide_3p01290 putative copper resistance protein CopC%2C precursor~PFAM: copper resistance protein CopC~SPTR: C1XSI0 Uncharacterized protein similar to copper resistance protein CopC~PFAM: Copper resistance protein CopC gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0874 Trad_0875 Trad_0875 Trad_0875 942443 943078 - hypothetical protein InterPro IPR017868:IPR002395~KEGG: rpb:RPB_4543 high-affinity nickel-transporter~SPTR: Q2IRD4 High-affinity nickel-transporter gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0875 Trad_0876 Trad_0876 Trad_0876 943199 943585 - hypothetical protein KEGG: GL23549 gene product from transcript GL23549-RA~SPTR: Q297P2 GA10755~PFAM: Protein of unknown function (DUF2946) gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0876 Trad_0877 Trad_0877 Trad_0877 943634 945175 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR017896:IPR017900~KEGG: sti:Sthe_0238 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~SPTR: D1C6D9 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0877 Trad_0878 Trad_0878 Trad_0878 945306 945620 - hypothetical protein KEGG: nph:NP1098A cobalamin cluster protein~SPTR: Q9MJT0 Cytochrome b (Fragment) gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0878 Trad_0879 Trad_0879 Trad_0879 945622 946002 - conserved hypothetical protein KEGG: sti:Sthe_0239 hypothetical protein~SPTR: D1C6E0 Putative uncharacterized protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0879 Trad_0880 Trad_0880 Trad_0880 946093 946764 - phosphate uptake regulator%2C PhoU COGs: COG0704 Phosphate uptake regulator~InterPro IPR008170~KEGG: ttj:TTHA0143 phosphate transport system regulatory protein PhoU~PFAM: PhoU family protein~SPTR: B7ABW6 Phosphate uptake regulator%2C PhoU~TIGRFAM: phosphate transport system regulatory protein PhoU~PFAM: PhoU domain~TIGRFAM: phosphate transport system regulatory protein PhoU gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0880 Trad_0881 Trad_0881 Trad_0881 947716 948387 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867:IPR011006:IPR016032~KEGG: dge:Dgeo_0130 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: Q1J251 Two component transcriptional regulator PhoB~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0881 Trad_0882 Trad_0882 Trad_0882 948408 949382 + PAS/PAC sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterProIPR003661:IPR003594:IPR005467:IPR013656:IPR 009082:IPR004358~KEGG: ddr:Deide_19810 putative histidine kinase%2C classic~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS fold-4 domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SPTR: C1CY27 Sensor protein~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0882 Trad_0883 Trad_0883 Trad_0883 949365 950090 - metallophosphoesterase InterPro IPR011152:IPR004843~KEGG: dra:DR_1360 hypothetical protein~PFAM: metallophosphoesterase~SPTR: Q9RUM4 Putative uncharacterized protein~PFAM: Calcineurin-like phosphoesterase gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0883 Trad_0884 Trad_0884 Trad_0884 950294 950671 - PRC-barrel domain protein InterPro IPR007903:IPR011033~KEGG: tbd:Tbd_2262 hypothetical protein~PFAM: PRC-barrel domain protein~SPTR: Q3SGN2 Putative uncharacterized protein~PFAM: PRC-barrel domain gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0884 Trad_0885 Trad_0885 Trad_0885 950889 951644 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR016040:IPR002347~KEGG: hau:Haur_2059 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: A9AVK9 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0885 Trad_0886 Trad_0886 Trad_0886 951702 952337 + protein of unknown function UPF0126 COGs: COG2860 membrane protein~InterPro IPR005115~KEGG: tth:TTC1437 transporter~PFAM: protein of unknown function UPF0126~SPTR: C1XXD3 Predicted membrane protein%2C COG2860~PFAM: UPF0126 domain gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0886 Trad_0887 Trad_0887 Trad_0887 952339 953313 + Pyridoxal-5'-phosphate-dependent protein beta subunit COGs: COG1171 Threonine dehydratase~InterPro IPR000634:IPR001926~KEGG: ami:Amir_0405 pyridoxal-5'-phosphate-dependent protein beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~SPTR: C6WGQ6 Pyridoxal-5'-phosphate-dependent protein beta subunit~PFAM: Pyridoxal-phosphate dependent enzyme gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0887 Trad_0888 Trad_0888 Trad_0888 953384 953755 + hypothetical protein KEGG: hypothetical protein~SPTR: B4VDS7 Putative uncharacterized protein gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0888 Trad_0889 Trad_0889 Trad_0889 953790 954827 + conserved hypothetical protein KEGG: cag:Cagg_2557 hypothetical protein~SPTR: B8G424 Putative uncharacterized protein gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0889 Trad_0890 Trad_0890 Trad_0890 955217 955738 + hypothetical protein KEGG: dra:DR_1654 hypothetical protein~SPTR: C1XIJ0 Putative uncharacterized protein gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0890 Trad_0891 Trad_0891 Trad_0891 956075 956968 + UbiA prenyltransferase InterPro IPR000537~KEGG: dge:Dgeo_2470 UbiA prenyltransferase~PFAM: UbiA prenyltransferase~SPTR: Q1J3N0 UbiA prenyltransferase~PFAM: UbiA prenyltransferase family gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0891 Trad_0892 Trad_0892 Trad_0892 956992 958413 + type I phosphodiesterase/nucleotide pyrophosphatase COGs: COG1524 Uncharacterized protein of the AP superfamily~InterPro IPR002591:IPR017849:IPR017850~KEGG: dge:Dgeo_2469 type I phosphodiesterase/nucleotide pyrophosphatase~PFAM: type I phosphodiesterase/nucleotide pyrophosphatase~SPTR: Q1J3N1 Type I phosphodiesterase/nucleotide pyrophosphatase~PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0892 Trad_0893 Trad_0893 Trad_0893 958438 959556 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR016040~KEGG: rca:Rcas_4405 oxidoreductase domain-containing protein~PFAM: oxidoreductase domain protein~SPTR: A7NS75 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0893 Trad_0894 Trad_0894 Trad_0894 959549 960325 + Xylose isomerase domain protein TIM barrel COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR012307:IPR013022~KEGG: sml:Smlt1193 putative xylose isomerase family protein~PFAM: Xylose isomerase domain protein TIM barrel~SPTR: B2FSL7 Putative xylose isomerase family protein~PFAM: Xylose isomerase-like TIM barrel gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0894 Trad_0895 Trad_0895 Trad_0895 960368 961435 + peptidase M42 family protein COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: ddr:Deide_00890 putative peptidase M42~PFAM: peptidase M42 family protein~SPTR: C1CXT3 Putative Peptidase M42~PFAM: M42 glutamyl aminopeptidase gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0895 Trad_0896 Trad_0896 Trad_0896 961462 962451 - Kelch repeat-containing protein InterPro IPR006652:IPR015915:IPR011043~KEGG: dge:Dgeo_2670 glycosy hydrolase family protein~PFAM: Kelch repeat-containing protein~SMART: Kelch repeat-containing protein~SPTR: Q1J331 Glycosyl hydrolase family 98%2C putative carbohydrate binding module~PFAM: Kelch motif gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0896 Trad_0897 Trad_0897 Trad_0897 963211 965985 + 2-oxoglutarate dehydrogenase%2C E1 subunit COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1)~InterPro IPR011603:IPR001017:IPR005475~KEGG: hoh:Hoch_4994 2-oxoglutarate dehydrogenase%2C E1 subunit~PFAM: Transketolase central region%3B dehydrogenase E1 component~PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring)~SPTR: B9XMW8 2-oxoglutarate dehydrogenase%2C E1 subunit~TIGRFAM: 2-oxoglutarate dehydrogenase%2C E1 subunit~PFAM: Dehydrogenase E1 component%3B Transketolase%2C pyrimidine binding domain~TIGRFAM: 2-oxoglutarate dehydrogenase%2C E1 component gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0897 Trad_0898 Trad_0898 Trad_0898 966111 967469 + 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein~InterProIPR006255:IPR000089:IPR003016:IPR004167:IPR 001078:IPR011053~KEGG: hoh:Hoch_4995 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase~PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein~SPTR: D0LVC3 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase~TIGRFAM: 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase~PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)%3B e3 binding domain%3B Biotin-requiring enzyme~TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0898 Trad_0899 Trad_0899 Trad_0899 967932 969317 + dihydrolipoamide dehydrogenase COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)~InterProIPR006258:IPR012999:IPR013027:IPR004099:IPR 016156:IPR000815~KEGG: hoh:Hoch_4996 dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~SPTR: B9XMX0 Dihydrolipoyl dehydrogenase~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain~TIGRFAM: dihydrolipoamide dehydrogenase gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0899 Trad_0900 Trad_0900 Trad_0900 969384 970223 - phosphoesterase PA-phosphatase related protein InterPro IPR000326:IPR016118~KEGG: dge:Dgeo_2748 phosphoesterase%2C PA-phosphatase-related protein~PFAM: phosphoesterase PA-phosphatase related~SMART: phosphoesterase PA-phosphatase related~SPTR: Q1J2V3 Phosphoesterase%2C PA-phosphatase related~PFAM: PAP2 superfamily gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0900 Trad_0901 Trad_0901 Trad_0901 970256 970999 - cobalamin (vitamin B12) biosynthesis CbiX protein COGs: COG2138 conserved hypothetical protein~InterPro IPR002762~KEGG: hau:Haur_2923 cobalamin (vitamin B12) biosynthesis CbiX protein~PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein~SPTR: A9B3I9 Cobalamin (Vitamin B12) biosynthesis CbiX protein~PFAM: CbiX gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0901 Trad_0902 Trad_0902 Trad_0902 970996 971820 - uroporphyrin-III C-methyltransferase COGs: COG0007 Uroporphyrinogen-III methylase~InterProIPR006366:IPR003043:IPR000878:IPR014777:IPR 014776~KEGG: rxy:Rxyl_1977 uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~SPTR: Q1AUK4 Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase~TIGRFAM: uroporphyrin-III C-methyltransferase~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: uroporphyrin-III C-methyltransferase gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0902 Trad_0903 Trad_0903 Trad_0903 971944 972084 - pseudogene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0903 Trad_0904 Trad_0904 Trad_0904 972472 974235 + nitrite and sulphite reductase 4Fe-4S region COGs: COG0155 Sulfite reductase beta subunit (hemoprotein)~InterPro IPR006066:IPR005117:IPR006067~KEGG: chl:Chy400_0742 sulfite reductase (NADPH)~PFAM: nitrite and sulphite reductase 4Fe-4S region%3B nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein~SPTR: C1XVF5 Sulfite reductase (NADPH) beta subunit~PFAM: Nitrite and sulphite reductase 4Fe-4S domain%3B Nitrite/Sulfite reductase ferredoxin-like half domain~TIGRFAM: ferredoxin-sulfite reductase gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0904 Trad_0905 Trad_0905 Trad_0905 974232 974906 + phosphoadenosine phosphosulfate reductase COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase~InterPro IPR004511:IPR002500:IPR014729~KEGG: dge:Dgeo_1409 phosphoadenosine phosphosulfate reductase~PFAM: phosphoadenosine phosphosulfate reductase~SPTR: Q1IYI0 Phosphoadenosine phosphosulfate reductase~TIGRFAM: phosphoadenosine phosphosulfate reductase~PFAM: Phosphoadenosine phosphosulfate reductase family~TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin) gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0905 Trad_0906 Trad_0906 Trad_0906 975262 976404 + glucose sorbosone dehydrogenase COGs: COG2133 Glucose/sorbosone dehydrogenase~InterPro IPR012938:IPR011042:IPR011041~KEGG: sme:SM_b20301 putative dehydgrogenase protein~PFAM: glucose sorbosone dehydrogenase~SPTR: A4BN04 Putative dehydgrogenase protein~PFAM: Glucose / Sorbosone dehydrogenase gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0906 Trad_0907 Trad_0907 Trad_0907 976513 977952 - UTP--glucose-1-phosphate uridylyltransferase COGs: COG4284 UDP-glucose pyrophosphorylase~InterPro IPR002618~KEGG: ote:Oter_3747 2-alkenal reductase~PFAM: UTP--glucose-1-phosphate uridylyltransferase~SPTR: A6PUQ1 UDP-N-acetylglucosamine diphosphorylase~PFAM: UTP--glucose-1-phosphate uridylyltransferase gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0907 Trad_0908 Trad_0908 Trad_0908 978478 979614 + Radical SAM domain protein COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR020050:IPR005244:IPR007197:IPR013785~KEGG: ttj:TTHA0804 radical SAM domain-containing protein~PFAM: Radical SAM domain protein~SPTR: Q72KR6 Biotin synthase/thiamine biosynthesis enzyme~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM domain protein%2C CofH subfamily gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0908 Trad_0909 Trad_0909 Trad_0909 979611 980459 + protein of unknown function DUF178 COGs: COG1427 periplasmic solute-binding protein~InterPro IPR003773~KEGG: dra:DR_0370 hypothetical protein~PFAM: protein of unknown function DUF178~SPTR: C1XMU0 Predicted periplasmic solute-binding protein~PFAM: Putative periplasminc binding protein (DUF178) gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0909 Trad_0910 Trad_0910 Trad_0910 980447 981154 + protein of unknown function DUF34 COGs: COG0327 conserved hypothetical protein~InterPro IPR002678~KEGG: cyn:Cyan7425_3201 protein of unknown function DUF34~PFAM: protein of unknown function DUF34~SPTR: B8HNU2 Putative uncharacterized protein~PFAM: NIF3 (NGG1p interacting factor 3) gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0910 Trad_0911 Trad_0911 Trad_0911 981214 981765 + peptide methionine sulfoxide reductase COGs: COG0225 Peptide methionine sulfoxide reductase~InterPro IPR002569~KEGG: cag:Cagg_2505 peptide methionine sulfoxide reductase~PFAM: Methionine sulfoxide reductase A~PRIAM: Peptide-methionine (S)-S-oxide reductase~SPTR: B8G3X4 Peptide methionine sulfoxide reductase~TIGRFAM: peptide methionine sulfoxide reductase~PFAM: Peptide methionine sulfoxide reductase~TIGRFAM: methionine-S-sulfoxide reductase gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0911 Trad_0912 Trad_0912 Trad_0912 981788 983356 - histidine ammonia-lyase COGs: COG2986 Histidine ammonia-lyase~InterPro IPR005921:IPR008948:IPR001106~KEGG: dge:Dgeo_2730 histidine ammonia-lyase~PFAM: phenylalanine/histidine ammonia-lyase~PRIAM: Histidine ammonia-lyase~SPTR: Q1J2X1 Histidine ammonia-lyase~TIGRFAM: histidine ammonia-lyase~PFAM: Phenylalanine and histidine ammonia-lyase~TIGRFAM: histidine ammonia-lyase gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0912 Trad_0913 Trad_0913 Trad_0913 983381 984709 - nucleoside recognition domain protein COGs: COG3314 conserved hypothetical protein~InterPro IPR011642~KEGG: asa:ASA_2086 transmembrane protein~PFAM: nucleoside recognition domain protein~SPTR: A4SMN0 Conserved transmembrane protein~PFAM: Nucleoside recognition gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0913 Trad_0914 Trad_0914 Trad_0914 984734 985930 - imidazolonepropionase COGs: COG1228 Imidazolonepropionase and related amidohydrolase~InterPro IPR005920:IPR011059:IPR006680~KEGG: dra:DR_A0148 imidazolonepropionase~PFAM: amidohydrolase~PRIAM: Imidazolonepropionase~SPTR: Q9RZ05 Imidazolonepropionase~TIGRFAM: imidazolonepropionase~PFAM: Amidohydrolase family~TIGRFAM: imidazolonepropionase gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0914 Trad_0915 Trad_0915 Trad_0915 985923 986843 - Arginase/agmatinase/formiminoglutamase COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family~InterPro IPR006035~KEGG: dge:Dgeo_2732 arginase/agmatinase/formiminoglutamase~PFAM: Arginase/agmatinase/formiminoglutamase~SPTR: Q1J2W9 Arginase/agmatinase/formiminoglutamase~PFAM: Arginase family~TIGRFAM: agmatinase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0915 Trad_0916 Trad_0916 Trad_0916 986840 988504 - urocanate hydratase COGs: COG2987 Urocanate hydratase~InterPro IPR000193~KEGG: dge:Dgeo_2735 urocanate hydratase~PFAM: Urocanase~PRIAM: Urocanate hydratase~SPTR: Q1J2W6 Urocanate hydratase~TIGRFAM: urocanate hydratase~PFAM: Urocanase~TIGRFAM: urocanate hydratase gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0916 Trad_0917 Trad_0917 Trad_0917 988587 989330 + transcriptional regulator%2C IclR family COGs: COG1414 Transcriptional regulator~InterPro IPR005471:IPR014757~KEGG: dra:DR_1217 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~SPTR: Q9RV13 Transcriptional regulator%2C IclR family~PFAM: IclR helix-turn-helix domain%3B Bacterial transcriptional regulator gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0917 Trad_0918 Trad_0918 Trad_0918 989614 990978 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase~InterProIPR017896:IPR012285:IPR009051:IPR000759:IPR 013027~KEGG: gyc:GYMC61_2212 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: C1XJ95 Glutamate synthase (NADPH) small subunit~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0918 Trad_0919 Trad_0919 Trad_0919 991002 991160 + hypothetical protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0919 Trad_0920 Trad_0920 Trad_0920 991161 992516 + dihydroorotate dehydrogenase family protein COGs: COG0167 Dihydroorotate dehydrogenase~InterProIPR005720:IPR017896:IPR013785:IPR017900:IPR 012135:IPR001450~KEGG: sus:Acid_7660 dihydropyrimidine dehydrogenase~PFAM: dihydroorotate oxidase%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein~PRIAM: Dihydropyrimidine dehydrogenase (NADP(+))~SPTR: C1XQJ5 Dihydroorotate oxidase B%2C catalytic subunit%3B dihydropyrimidine dehydrogenase (NADP+)%3B dihydrouracil dehydrogenase (NAD+)~TIGRFAM: dihydroorotate dehydrogenase family protein~PFAM: Dihydroorotate dehydrogenase~TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0920 Trad_0921 Trad_0921 Trad_0921 992656 994032 + dihydropyrimidinase COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase~InterPro IPR011778:IPR011059:IPR006680~KEGG: pjd:Pjdr2_4687 dihydropyrimidinase~PFAM: amidohydrolase~SPTR: C1XJ97 D-hydantoinase~TIGRFAM: dihydropyrimidinase~PFAM: Amidohydrolase family~TIGRFAM: D-hydantoinase%3B dihydroorotase%2C multifunctional complex type gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0921 Trad_0922 Trad_0922 Trad_0922 994029 994850 + ABC transporter related protein COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: bbt:BBta_6033 putative ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XQJ8 ABC-type nitrate/sulfonate/bicarbonate transport system%2C ATPase component~manually curated~PFAM: ABC transporter gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0922 Trad_0923 Trad_0923 Trad_0923 994850 996697 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: mch:Mchl_2051 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XQK2 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0923 Trad_0924 Trad_0924 Trad_0924 996694 997626 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: atc:AGR_C_4335 putative aliphatic sulfonates transport permease protein SsuC~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XQK3 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0924 Trad_0925 Trad_0925 Trad_0925 997752 998810 + NMT1/THI5 like domain protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR015168~KEGG: fal:FRAAL1422 putative ABC transporter substrate binding protein~PFAM: NMT1/THI5 like domain protein~SPTR: C1XJA4 ABC-type nitrate/sulfonate/bicarbonate transport system%2C periplasmic component~PFAM: NMT1/THI5 like gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0925 Trad_0926 Trad_0926 Trad_0926 998930 999838 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR016040:IPR002347:IPR002198:IPR005829~KEGG: npu:Npun_F0203 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C4D0B6 Putative uncharacterized protein~PFAM: short chain dehydrogenase gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0926 Trad_0927 Trad_0927 Trad_0927 1000161 1001651 + sulfatase COGs: COG3119 Arylsulfatase A~InterPro IPR017849:IPR017850:IPR000917~KEGG: hoh:Hoch_2061 sulfatase~PFAM: sulfatase~SPTR: D0LG04 Sulfatase~PFAM: Sulfatase gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0927 Trad_0928 Trad_0928 Trad_0928 1002040 1002456 - transcriptional regulator%2C XRE family InterPro IPR001387:IPR010982~KEGG: pfs:PFLU0443 hypothetical protein~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: C3KBV4 Putative uncharacterized protein~PFAM: Helix-turn-helix gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0928 Trad_0929 Trad_0929 Trad_0929 1002453 1002758 - pseudogene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0929 Trad_0930 Trad_0930 Trad_0930 1003041 1003217 - hypothetical protein KEGG: GSVIVT00035402001%3B hypothetical protein LOC100257857~SPTR: A5B9H2 Putative uncharacterized protein gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0930 Trad_0931 Trad_0931 Trad_0931 1003355 1003552 + conserved hypothetical protein KEGG: hypothetical protein~SPTR: A5E622 Putative uncharacterized protein gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0931 Trad_0932 Trad_0932 Trad_0932 1003602 1004015 - fibrocystin-L-like protein KEGG: fibrocystin-L-like protein~SPTR: Q3HTK5 Pherophorin-C2 protein gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0932 Trad_0933 Trad_0933 Trad_0933 1004112 1005551 - hypothetical protein KEGG: kra:Krad_0383 peptidase S8 and S53 subtilisin kexin sedolisin~SPTR: A6W4Y4 Peptidase S8 and S53 subtilisin kexin sedolisin gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0933 Trad_0934 Trad_0934 Trad_0934 1005951 1008533 - transcriptional regulator%2C SARP family COGs: COG3629 DNA-binding transcriptional activator of the SARP family~InterProIPR019734:IPR013026:IPR011990:IPR000767:IPR 005158:IPR002182~KEGG: rca:Rcas_3701 SARP family transcriptional regulator~PFAM: transcriptional activator domain%3B NB-ARC domain protein~SPTR: A7NQ95 Transcriptional regulator%2C SARP family~PFAM: Bacterial transcriptional activator domain gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0934 Trad_0935 Trad_0935 Trad_0935 1008751 1010448 + hypothetical protein KEGG: scl:sce4203 hypothetical protein~SPTR: A9EWZ7 Putative uncharacterized protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0935 Trad_0936 Trad_0936 Trad_0936 1010563 1011828 + hemolysin-type calcium-binding region InterPro IPR011042~KEGG: cyn:Cyan7425_0297 hemolysin-type calcium-binding region~SPTR: B8HS32 Hemolysin-type calcium-binding region~PFAM: Beta-propeller repeat gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0936 Trad_0937 Trad_0937 Trad_0937 1012629 1013057 + transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: plu:plu4843 IS200 family transposase~PFAM: transposase IS200-family protein~SPTR: Q7M7F4 Transposase%2C IS200 Familly~PFAM: Transposase IS200 like gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0937 Trad_0938 Trad_0938 Trad_0938 1013267 1013689 - PilT protein domain protein COGs: COG5573 nucleic-acid-binding protein contains PIN domain~KEGG: gbr:Gbro_2961 PilT protein domain protein~SPTR: D0LA04 PilT protein domain protein~PFAM: PIN domain gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0938 Trad_0939 Trad_0939 Trad_0939 1013679 1013921 - conserved hypothetical protein KEGG: pth:PTH_2282 hypothetical protein~SPTR: A5CZV8 Putative uncharacterized protein gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0939 Trad_0940 Trad_0940 Trad_0940 1014023 1015228 + Luciferase-like%2C subgroup COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase~InterPro IPR011251:IPR016048~KEGG: rmr:Rmar_2381 luciferase-like monooxygenase~PFAM: Luciferase-like%2C subgroup~SPTR: D0MEN1 Luciferase-like monooxygenase~PFAM: Luciferase-like monooxygenase gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0940 Trad_0941 Trad_0941 Trad_0941 1015235 1016122 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: bha:BH0349 oligopeptide ABC transporter (permease)~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q9KFX1 Oligopeptide ABC transporter (Permease)~PFAM: Binding-protein-dependent transport system inner membrane component gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0941 Trad_0942 Trad_0942 Trad_0942 1016119 1017039 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: nth:Nther_2789 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B2A2W9 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0942 Trad_0943 Trad_0943 Trad_0943 1017353 1018870 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: bcl:ABC3661 oligopeptide ABC transporter substrate-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: Q5WBR6 Oligopeptide ABC transporter substrate-binding protein~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0943 Trad_0944 Trad_0944 Trad_0944 1019047 1020399 + peptidase M20 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR011650:IPR002933~KEGG: rrs:RoseRS_2549 peptidase M20~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: A5UWC2 Peptidase M20~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0944 Trad_0945 Trad_0945 Trad_0945 1020396 1021577 + amidohydrolase COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase~InterPro IPR010168:IPR017439:IPR011650:IPR002933~KEGG: nth:Nther_2791 amidohydrolase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~PRIAM: N-acetyldiaminopimelate deacetylase~SPTR: B2A2X1 Amidohydrolase~TIGRFAM: amidohydrolase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: amidohydrolase gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0945 Trad_0946 Trad_0946 Trad_0946 1022038 1023048 + transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR010982:IPR001761~KEGG: sth:STH770 LacI family transcriptional repressor~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: Q67RD8 LacI family transcriptional repressor~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0946 Trad_0947 Trad_0947 Trad_0947 1023111 1024457 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: dsh:Dshi_1353 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: B9R581 Bacterial extracellular solute-binding protein%2C putative~PFAM: Bacterial extracellular solute-binding protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0947 Trad_0948 Trad_0948 Trad_0948 1024517 1025782 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: dsh:Dshi_1354 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B6R0Q5 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0948 Trad_0949 Trad_0949 Trad_0949 1025779 1026999 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: dsh:Dshi_1355 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B9R579 ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0949 Trad_0950 Trad_0950 Trad_0950 1026996 1028285 + glycoside hydrolase family 37 COGs: COG1626 Neutral trehalase~InterPro IPR008928:IPR001661~KEGG: rmr:Rmar_1774 glycoside hydrolase family 37~PFAM: glycoside hydrolase family 37~SPTR: D0MJK0 Glycoside hydrolase family 37~PFAM: Trehalase gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0950 Trad_0951 Trad_0951 Trad_0951 1028285 1029613 + glycosyl transferase group 1 InterPro IPR001296~KEGG: rba:RB12344 glycosyltransferase~PFAM: glycosyl transferase group 1~SPTR: Q7UIS8 Predicted glycosyltransferase~PFAM: Glycosyl transferases group 1 gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0951 Trad_0952 Trad_0952 Trad_0952 1029628 1031574 + peptidase S9 prolyl oligopeptidase active site domain protein COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase~InterPro IPR011042:IPR001375~KEGG: scl:sce6409 putative peptidase~PFAM: peptidase S9 prolyl oligopeptidase active site domain protein~SPTR: A9GKF2 Putative peptidase~PFAM: Prolyl oligopeptidase family gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0952 Trad_0953 Trad_0953 Trad_0953 1031571 1032131 - 2'-5' RNA ligase COGs: COG1514 2'-5' RNA ligase~InterPro IPR004175:IPR009097:IPR014051~KEGG: ppd:Ppro_2521 2'-5' RNA ligase~PFAM: Phosphoesterase HXTX~SPTR: A1AS05 2'-5' RNA ligase~TIGRFAM: 2'-5' RNA ligase~PFAM: 2'%2C5' RNA ligase family~TIGRFAM: 2'-5' RNA ligase gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0953 Trad_0954 Trad_0954 Trad_0954 1032133 1032252 - hypothetical protein gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0954 Trad_0955 Trad_0955 Trad_0955 1032228 1032734 - DinB family protein COGs: COG2318 conserved hypothetical protein~InterPro IPR007837~KEGG: dge:Dgeo_2100 DinB~PFAM: DinB family protein~SPTR: Q1IWJ0 DinB/YfiT family protein~PFAM: DinB family gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0955 Trad_0956 Trad_0956 Trad_0956 1032731 1033150 - conserved hypothetical protein KEGG: ddr:Deide_3p00382 hypothetical protein~SPTR: C1D473 Putative uncharacterized protein gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0956 Trad_0957 Trad_0957 Trad_0957 1033198 1033491 + CopG domain protein DNA-binding domain protein InterPro IPR002145~KEGG: mbt:JTY_0596 hypothetical protein~PFAM: CopG domain protein DNA-binding domain protein~SPTR: C0GWG3 Putative uncharacterized protein~PFAM: Ribbon-helix-helix protein%2C copG family gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0957 Trad_0958 Trad_0958 Trad_0958 1033520 1033924 + PilT protein domain protein COGs: COG2402 nucleic acid-binding protein contains PIN domain~InterPro IPR002716~KEGG: dau:Daud_2122 PilT domain-containing protein~PFAM: PilT protein domain protein~SPTR: C0GWG4 PilT protein domain protein~PFAM: PIN domain gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0958 Trad_0959 Trad_0959 Trad_0959 1033932 1034382 - pseudogene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0959 Trad_0960 Trad_0960 Trad_0960 1034482 1035334 - pseudogene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0960 Trad_0961 Trad_0961 Trad_0961 1035331 1035549 - conserved hypothetical protein InterPro IPR011260~KEGG: sgr:SGR_1122 hypothetical protein~SPTR: B1VUA7 Putative uncharacterized protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0961 Trad_0962 Trad_0962 Trad_0962 1035546 1036103 - bifunctional deaminase-reductase domain protein COGs: COG0262 Dihydrofolate reductase~InterPro IPR002734~KEGG: dfe:Dfer_0824 bifunctional deaminase-reductase domain protein~PFAM: bifunctional deaminase-reductase domain protein~SPTR: B5HBZ4 Putative uncharacterized protein~PFAM: RibD C-terminal domain gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0962 Trad_0963 Trad_0963 Trad_0963 1036240 1036572 - pseudogene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0963 Trad_0964 Trad_0964 Trad_0964 1036569 1037453 - 3-demethylubiquinone-9 3-methyltransferase COGs: COG3865 conserved hypothetical protein~InterPro IPR009725~KEGG: amt:Amet_1912 3-demethylubiquinone-9 3-methyltransferase~PFAM: 3-demethylubiquinone-9 3-methyltransferase~SPTR: C1XI23 Uncharacterized conserved protein~PFAM: 3-demethylubiquinone-9 3-methyltransferase gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0964 Trad_0965 Trad_0965 Trad_0965 1037479 1037925 - Glyoxalase/bleomycin resistance protein/dioxygenase COGs: COG2764 conserved hypothetical protein~InterPro IPR004360~KEGG: phe:Phep_1228 glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: C6XS99 Glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: 3-demethylubiquinone-9 3-methyltransferase gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0965 Trad_0966 Trad_0966 Trad_0966 1037980 1038321 - YCII-related protein InterPro IPR011008:IPR005545~KEGG: bcv:Bcav_2090 YCII-related protein~PFAM: YCII-related~SPTR: D0D4K7 AO15~PFAM: YCII-related domain gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0966 Trad_0967 Trad_0967 Trad_0967 1038448 1039359 - transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterProIPR018060:IPR012287:IPR009057:IPR020449:IPR 018062:IPR000005~KEGG: bbe:BBR47_58330 probable transcriptional regulator~PFAM: helix-turn-helix- domain containing protein AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Q2BDI5 Two-component response regulator~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0967 Trad_0968 Trad_0968 Trad_0968 1039751 1043572 + alpha amylase catalytic region COGs: COG0366 Glycosidase~InterPro IPR006589:IPR013781:IPR017853:IPR006047~KEGG: rca:Rcas_2077 alpha amylase catalytic region~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: A7NKZ3 Alpha amylase catalytic region~PFAM: Alpha amylase%2C catalytic domain gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0968 Trad_0969 Trad_0969 Trad_0969 1043831 1044337 - crossover junction endodeoxyribonuclease RuvC COGs: COG0817 Holliday junction resolvasome endonuclease subunit~InterPro IPR002176:IPR012337~KEGG: dge:Dgeo_0327 crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC~PRIAM: Crossover junction endodeoxyribonuclease~SPTR: C1XU94 Holliday junction endonuclease RuvC~TIGRFAM: crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC~TIGRFAM: crossover junction endodeoxyribonuclease RuvC gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0969 Trad_0970 Trad_0970 Trad_0970 1044437 1045777 - glutamine synthetase%2C type I COGs: COG0174 Glutamine synthetase~InterPro IPR004809:IPR014746:IPR008147:IPR008146~KEGG: ttj:TTHA1329 glutamine synthetase~PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp~SPTR: Q72J16 Glutamine synthetase~TIGRFAM: glutamine synthetase%2C type I~PFAM: Glutamine synthetase%2C catalytic domain%3B Glutamine synthetase%2C beta-Grasp domain~TIGRFAM: glutamine synthetase%2C type I gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0970 Trad_0971 Trad_0971 Trad_0971 1046316 1047488 + Extracellular ligand-binding receptor COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828~KEGG: dba:Dbac_0611 extracellular ligand-binding receptor~PFAM: Extracellular ligand-binding receptor~SPTR: C7LX62 Extracellular ligand-binding receptor~PFAM: Receptor family ligand binding region gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0971 Trad_0972 Trad_0972 Trad_0972 1047595 1048896 + inner-membrane translocator COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components~InterPro IPR001851~KEGG: btr:Btr_1147 permease protein of ABC transporter~PFAM: inner-membrane translocator~SPTR: A9IU69 Permease protein of ABC transporter~PFAM: Branched-chain amino acid transport system / permease component gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0972 Trad_0973 Trad_0973 Trad_0973 1048893 1050368 + inner-membrane translocator COGs: COG4177 ABC-type branched-chain amino acid transport system permease component~InterPro IPR001851~KEGG: kol:Kole_1104 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: C5CI27 Inner-membrane translocator~PFAM: Branched-chain amino acid transport system / permease component gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0973 Trad_0974 Trad_0974 Trad_0974 1050368 1051240 + ABC transporter related protein COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003593:IPR003439:IPR018170~KEGG: dat:HRM2_33790 ABC-type branched-chain amino acid transport system%2C permease component~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C0QMD7 ABC-type branched-chain amino acid transport system%2C permease component~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0974 Trad_0975 Trad_0975 Trad_0975 1051237 1052022 + ABC transporter related protein COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: dat:HRM2_33780 ABC-type branched-chain amino acid transport system%2C ATPase component~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C0QMD6 ABC-type branched-chain amino acid transport system%2C ATPase component~PFAM: ABC transporter gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0975 Trad_0976 Trad_0976 Trad_0976 1052394 1053266 + short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR016040:IPR002347:IPR002198~KEGG: mxa:MXAN_6211 short chain dehydrogenase/reductase family oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C4DG77 Putative uncharacterized protein~PFAM: short chain dehydrogenase gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0976 Trad_0977 Trad_0977 Trad_0977 1053640 1054884 + aspartate kinase COGs: COG0527 Aspartokinase~InterProIPR005260:IPR001341:IPR001048:IPR018042:IPR 002912~KEGG: ttj:TTHA0534 aspartate kinase~PFAM: aspartate/glutamate/uridylate kinase%3B amino acid-binding ACT domain protein~SPTR: C1XYW0 Aspartokinase~TIGRFAM: aspartate kinase%3B aspartate kinase%2C monofunctional class~PFAM: Amino acid kinase family%3B ACT domain~TIGRFAM: aspartate kinase%2C monofunctional class%3B aspartate kinase gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0977 Trad_0978 Trad_0978 Trad_0978 1055122 1056489 + beta-Ig-H3/fasciclin COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats~InterPro IPR000782:IPR010895~KEGG: sru:SRU_2209 osteoblast specific factor 2-related protein~PFAM: beta-Ig-H3/fasciclin%3B CHRD domain containing protein~SMART: beta-Ig-H3/fasciclin%3B CHRD domain containing protein~SPTR: B5K4P0 Beta-Ig-H3/fasciclin~PFAM: CHRD domain%3B Fasciclin domain gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0978 Trad_0979 Trad_0979 Trad_0979 1056850 1058298 + O-antigen polymerase InterPro IPR007016~KEGG: tth:TTC1837 hypothetical protein~PFAM: O-antigen polymerase~SPTR: C1XSE4 Putative uncharacterized protein~PFAM: O-Antigen ligase gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0979 Trad_0980 Trad_0980 Trad_0980 1058597 1059661 + Kelch repeat-containing protein COGs: COG3055 conserved hypothetical protein~InterPro IPR006652:IPR015915:IPR011043~KEGG: gvi:gll3206 hypothetical protein~PFAM: Kelch repeat-containing protein~SMART: Kelch repeat-containing protein~SPTR: Q7NGG3 Gll3206 protein~PFAM: Kelch motif gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0980 Trad_0981 Trad_0981 Trad_0981 1059741 1060316 + hypothetical protein KEGG: bbt:BBta_0983 major facilitator superfamily permease~SPTR: B5G9J7 Predicted protein gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0981 Trad_0982 Trad_0982 Trad_0982 1060459 1061001 + 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase~InterPro IPR004507:IPR003382~KEGG: dra:DR_2603 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: flavoprotein~SPTR: Q9RR91 Probable aromatic acid decarboxylase~TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~manually curated~PFAM: Flavoprotein~TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0982 Trad_0983 Trad_0983 Trad_0983 1060998 1061663 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase~InterPro IPR001228:IPR018294~KEGG: dge:Dgeo_0181 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~SPTR: Q1J200 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: Uncharacterized protein family UPF0007~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0983 Trad_0984 Trad_0984 Trad_0984 1061660 1062487 + 4-diphosphocytidyl-2C-methyl-D-erythritolkinase COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase~InterProIPR004424:IPR014721:IPR020568:IPR006204:IPR 013750~KEGG: dra:DR_2605 hypothetical protein~PFAM: GHMP kinase%3B GHMP kinase domain protein~SPTR: Q9RR89 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0984 Trad_0985 Trad_0985 Trad_0985 1062491 1062766 - conserved hypothetical protein COGs: COG3526 conserved hypothetical protein~InterPro IPR011893:IPR007843~KEGG: rop:ROP_54540 hypothetical protein~PFAM: Selenoprotein W-related~SPTR: Q1YFL5 Possible selenoprotein%2C W-related family~TIGRFAM: conserved hypothetical protein~PFAM: Rdx family~TIGRFAM: selT/selW/selH selenoprotein domain gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0985 Trad_0986 Trad_0986 Trad_0986 1062824 1063010 - pseudogene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0986 Trad_0987 Trad_0987 Trad_0987 1063007 1063222 - protein of unknown function UPF0150 InterPro IPR005357~KEGG: sus:Acid_3196 hypothetical protein~PFAM: protein of unknown function UPF0150~SPTR: Q022D0 Putative uncharacterized protein~PFAM: Uncharacterised protein family (UPF0150) gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0987 Trad_0988 Trad_0988 Trad_0988 1063283 1064974 - dihydroxy-acid dehydratase COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase~InterPro IPR004404:IPR020558:IPR000581~KEGG: dge:Dgeo_1240 dihydroxy-acid dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase~PRIAM: Dihydroxy-acid dehydratase~SPTR: Q1IYZ8 Dihydroxy-acid dehydratase~TIGRFAM: dihydroxy-acid dehydratase~PFAM: Dehydratase family~TIGRFAM: dihydroxy-acid dehydratase gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0988 Trad_0989 Trad_0989 Trad_0989 1065092 1066141 + galactose-1-phosphate uridylyltransferase COGs: COG1085 Galactose-1-phosphate uridylyltransferase~InterProIPR001937:IPR011151:IPR011146:IPR005849:IPR 005850~KEGG: esa:ESA_02587 galactose-1-phosphate uridylyltransferase~PFAM: galactose-1-phosphate uridyl transferase domain protein~PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase~SPTR: B9XBB2 Galactose-1-phosphate uridylyltransferase~TIGRFAM: galactose-1-phosphate uridylyltransferase~PFAM: Galactose-1-phosphate uridyl transferase%2C C-terminal domain%3B Galactose-1-phosphate uridyl transferase%2C N-terminal domain~TIGRFAM: galactose-1-phosphate uridylyltransferase%2C family 1 gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0989 Trad_0990 Trad_0990 Trad_0990 1066229 1066645 - PKD domain containing protein InterPro IPR000601~KEGG: hch:HCH_00086 cellobiohydrolase A (1%2C4-beta-cellobiosidase A)~PFAM: PKD domain containing protein~SMART: PKD domain containing protein~SPTR: C1VE63 Glucose/sorbosone dehydrogenase~PFAM: PKD domain gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0990 Trad_0991 Trad_0991 Trad_0991 1066866 1067633 + transcriptional regulator%2C DeoR family COGs: COG1349 Transcriptional regulators of sugar metabolism~InterPro IPR001034:IPR018356:IPR014036~KEGG: mno:Mnod_8218 transcriptional regulator%2C DeoR family~PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR~SPTR: B8IXE9 Transcriptional regulator%2C DeoR family~PFAM: Bacterial regulatory proteins%2C deoR family%3B DeoR-like helix-turn-helix domain gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0991 Trad_0992 Trad_0992 Trad_0992 1067773 1068705 + periplasmic binding protein/LacI transcriptional regulator COGs: COG1879 ABC-type sugar transport system periplasmic component~InterPro IPR001761~KEGG: ecf:ECH74115_5599 periplasmic binding protein/LacI transcriptional regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator~SPTR: B5Z1F2 Periplasmic binding protein/LacI transcriptional regulator~PFAM: family gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0992 Trad_0993 Trad_0993 Trad_0993 1068884 1070419 + ABC transporter related protein COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR003593:IPR003439:IPR015861:IPR017871~KEGG: npu:Npun_R5325 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: B2J4F4 ABC transporter related~PFAM: ABC transporter gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0993 Trad_0994 Trad_0994 Trad_0994 1070416 1071384 + inner-membrane translocator COGs: COG4158 ABC-type sugar transport system permease component~InterPro IPR001851~KEGG: ent:Ent638_0288 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: A4W5J7 Inner-membrane translocator~PFAM: Branched-chain amino acid transport system / permease component gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0994 Trad_0995 Trad_0995 Trad_0995 1071388 1072872 + xylulokinase COGs: COG1070 Sugar (pentulose and hexulose) kinase~InterPro IPR006000:IPR018483:IPR018484:IPR018485~KEGG: rxy:Rxyl_2898 xylulokinase~PFAM: Carbohydrate kinase%2C FGGY-like~SPTR: Q1AS19 Xylulokinase~TIGRFAM: xylulokinase~PFAM: FGGY family of carbohydrate kinases%2C N-terminal domain%3B FGGY family of carbohydrate kinases%2C C-terminal domain~TIGRFAM: D-xylulose kinase gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0995 Trad_0996 Trad_0996 Trad_0996 1072869 1073411 + D-lyxose ketol-isomerase COGs: COG3822 ABC-type sugar transport system auxiliary component~InterPro IPR011051~KEGG: ttr:Tter_2534 hypothetical protein~PRIAM: D-lyxose ketol-isomerase~SPTR: D1CI52 Putative uncharacterized protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0996 Trad_0997 Trad_0997 Trad_0997 1073408 1074853 + xylulokinase COGs: COG1070 Sugar (pentulose and hexulose) kinase~InterPro IPR006000:IPR018483:IPR018484:IPR018485~KEGG: dge:Dgeo_2691 xylulokinase~PFAM: Carbohydrate kinase%2C FGGY-like~SPTR: C1XWA1 Xylulokinase~TIGRFAM: xylulokinase~PFAM: FGGY family of carbohydrate kinases%2C N-terminal domain%3B FGGY family of carbohydrate kinases%2C C-terminal domain~TIGRFAM: D-xylulose kinase gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0997 Trad_0998 Trad_0998 Trad_0998 1074943 1075191 + conserved hypothetical protein KEGG: xce:Xcel_2313 hypothetical protein~SPTR: D1BVL2 Putative uncharacterized protein gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0998 Trad_0999 Trad_0999 Trad_0999 1075178 1075528 + transcriptional modulator of MazE/toxin%2C MazF COGs: COG2337 Growth inhibitor~InterPro IPR011067:IPR003477~KEGG: sen:SACE_1313 hypothetical protein~PFAM: PemK family protein~SPTR: A4F9B1 Putative uncharacterized protein~PFAM: PemK-like protein gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_0999 Trad_1000 Trad_1000 Trad_1000 1075791 1085033 - protein of unknown function DUF490 InterPro IPR007452~KEGG: dge:Dgeo_0508 hypothetical protein~PFAM: protein of unknown function DUF490~SPTR: Q1J124 Putative uncharacterized protein~PFAM: Family of unknown function (DUF490) gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1000 Trad_1001 Trad_1001 Trad_1001 1085209 1085508 + acylphosphatase COGs: COG1254 Acylphosphatase~InterPro IPR001792~KEGG: ttj:TTHA0567 acylphosphatase~PFAM: acylphosphatase~SPTR: C1XJV3 Acylphosphatase~PFAM: Acylphosphatase gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1001 Trad_1002 Trad_1002 Trad_1002 1085486 1086361 + Indole-3-glycerol-phosphate synthase COGs: COG0134 Indole-3-glycerol phosphate synthase~InterPro IPR013785:IPR011060:IPR001468:IPR013798~KEGG: dge:Dgeo_1587 indole-3-glycerol-phosphate synthase~PFAM: Indole-3-glycerol phosphate synthase~PRIAM: Indole-3-glycerol-phosphate synthase~SPTR: Q1IY02 Indole-3-glycerol-phosphate synthase~PFAM: Indole-3-glycerol phosphate synthase gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1002 Trad_1003 Trad_1003 Trad_1003 1086354 1087079 + short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR016040:IPR002347:IPR002198:IPR016059~KEGG: fre:Franean1_6472 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Q1Q6Z7 Similar to short chain oxidoreductase or oxoacyl carrier reductase~PFAM: short chain dehydrogenase gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1003 Trad_1004 Trad_1004 Trad_1004 1087139 1088410 + peptidase M16 domain protein COGs: COG0612 Zn-dependent peptidase~InterPro IPR011237:IPR011249:IPR011765:IPR007863~KEGG: ttj:TTHA1265 zinc-dependent peptidase~PFAM: peptidase M16 domain protein~SPTR: C1XID7 Predicted Zn-dependent peptidase~PFAM: Peptidase M16 inactive domain%3B Insulinase (Peptidase family M16) gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1004 Trad_1005 Trad_1005 Trad_1005 1088407 1089630 + peptidase M16 domain protein COGs: COG0612 Zn-dependent peptidase~InterProIPR011237:IPR011249:IPR001431:IPR011765:IPR 007863~KEGG: tth:TTC0900 zinc protease~PFAM: peptidase M16 domain protein~SPTR: C1XID8 Predicted Zn-dependent peptidase~PFAM: Peptidase M16 inactive domain%3B Insulinase (Peptidase family M16) gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1005 Trad_1006 Trad_1006 Trad_1006 1089699 1090418 + conserved hypothetical protein KEGG: tth:TTC0743 hypothetical protein~SPTR: C1XIC0 Putative uncharacterized protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1006 Trad_1007 Trad_1007 Trad_1007 1090473 1092500 + hypothetical protein KEGG: bcj:BCAM2169 putative outer membrane autotransporter~SPTR: B4EFW6 Putative outer membrane autotransporter gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1007 Trad_1008 Trad_1008 Trad_1008 1092523 1093647 + permease YjgP/YjgQ family protein COGs: COG0795 permease~InterPro IPR005495~KEGG: ttj:TTHA1108 hypothetical protein~PFAM: permease YjgP/YjgQ family protein~SPTR: C1XVZ4 Predicted permease~PFAM: Predicted permease YjgP/YjgQ family gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1008 Trad_1009 Trad_1009 Trad_1009 1093886 1095580 + modification methylase InterPro IPR002296:IPR002052~KEGG: dma:DMR_14640 modification methylase~SPTR: C6MVN5 Putative uncharacterized protein~manually curated~PFAM: Eco57I restriction endonuclease gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1009 Trad_1010 Trad_1010 Trad_1010 1095604 1096286 + pseudogene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1010 Trad_1011 Trad_1011 Trad_1011 1096870 1099059 + (p)ppGpp synthetase I%2C SpoT/RelA COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase~InterProIPR003607:IPR004811:IPR012675:IPR012676:IPR 006674:IPR007685:IPR004095:IPR002912~KEGG: dge:Dgeo_1308 (p)ppGpp synthetase I%2C SpoT/RelA~PFAM: RelA/SpoT domain protein%3B metal-dependent phosphohydrolase HD sub domain%3B TGS domain protein%3B amino acid-binding ACT domain protein~PRIAM: GTP diphosphokinase~SMART: metal-dependent phosphohydrolase HD region~SPTR: Q1IYT0 (P)ppGpp synthetase I%2C SpoT/RelA~TIGRFAM: RelA/SpoT family protein~PFAM: HD domain%3B TGS domain%3B Region found in RelA / SpoT proteins~TIGRFAM: (p)ppGpp synthetase%2C RelA/SpoT family gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1011 Trad_1012 Trad_1012 Trad_1012 1099341 1100600 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: acp:A2cp1_4308 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q2IH64 ABC transporter%2C ATPase subunit~PFAM: ABC transporter gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1012 Trad_1013 Trad_1013 Trad_1013 1100748 1101602 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: cdf:CD3162 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C0C4D9 Putative uncharacterized protein~PFAM: ABC transporter gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1013 Trad_1014 Trad_1014 Trad_1014 1101609 1103390 + hypothetical protein KEGG: psb:Psyr_4349 apolipoprotein N-acyltransferase~SPTR: Q4ZN93 Apolipoprotein N-acyltransferase gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1014 Trad_1015 Trad_1015 Trad_1015 1103426 1104049 + hypothetical protein KEGG: oan:Oant_4343 NosY%2C nitrous-oxide reductase%2C NosY component~SPTR: A6X739 NosY%2C nitrous-oxide reductase%2C NosY component gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1015 Trad_1016 Trad_1016 Trad_1016 1104153 1105133 - arsenite-activated ATPase ArsA COGs: COG0003 ATPase involved in chromosome partitioning~InterPro IPR003593:IPR003348~KEGG: abo:ABO_1301 putative arsenical pump-driving ATPase~PFAM: Anion-transporting ATPase~PRIAM: Arsenite-transporting ATPase~SMART: AAA ATPase~SPTR: Q0VPZ9 Putative arsenical pump-driving ATPase~TIGRFAM: arsenite-activated ATPase ArsA~PFAM: Anion-transporting ATPase~TIGRFAM: arsenite-activated ATPase (arsA) gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1016 Trad_1017 Trad_1017 Trad_1017 1105146 1105403 - conserved hypothetical protein KEGG: ilo:IL0698 hypothetical protein~SPTR: Q5R0F1 Uncharacterized conserved protein gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1017 Trad_1018 Trad_1018 Trad_1018 1105403 1107079 - carbon starvation protein CstA COGs: COG1966 Carbon starvation protein predicted membrane protein~InterPro IPR003706~KEGG: abo:ABO_1303 carbon starvation protein CstA~PFAM: carbon starvation protein CstA~SPTR: Q0VPZ7 Carbon starvation protein CstA~PFAM: Carbon starvation protein CstA gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1018 Trad_1019 Trad_1019 Trad_1019 1107428 1109752 + protein of unknown function DUF214 InterPro IPR003838~KEGG: ank:AnaeK_1836 protein of unknown function DUF214~PFAM: protein of unknown function DUF214~SPTR: B4UAG9 Putative uncharacterized protein~PFAM: Predicted permease gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1019 Trad_1020 Trad_1020 Trad_1020 1109810 1112845 - alpha-1%2C6-glucosidase%2C pullulanase-type COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase~InterProIPR011839:IPR013781:IPR017853:IPR014756:IPR 005323:IPR004193:IPR006047~KEGG: ddr:Deide_15110 putative pullulanase precursor (alpha-dextrin endo-1%2C6-alpha-glucosidase)(pullulan 6-glucanohydrolase)~PFAM: pullanase-associated protein%3B glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region~SPTR: C1XVY8 Alpha-1%2C6-glucosidase%2C pullulanase-type~TIGRFAM: alpha-1%2C6-glucosidase%2C pullulanase-type~PFAM: Domain of unknown function (DUF3372)%3B Alpha amylase%2C catalytic domain%3B Carbohydrate-binding module 48 (Isoamylase N-terminal domain)%3B Bacterial pullanase-associated domain~TIGRFAM: alpha-1%2C6-glucosidases%2C pullulanase-type gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1020 Trad_1021 Trad_1021 Trad_1021 1112992 1114287 - cytochrome c class I InterPro IPR009056:IPR003088~KEGG: ttj:TTHA1423 cytochrome c-552 precursor~PFAM: cytochrome c class I~SPTR: Q1J072 Cytochrome c%2C class I~PFAM: Cytochrome c gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1021 Trad_1022 Trad_1022 Trad_1022 1114280 1115461 - conserved hypothetical protein KEGG: sus:Acid_0494 hypothetical protein~SPTR: Q02BR2 Putative uncharacterized protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1022 Trad_1023 Trad_1023 Trad_1023 1115458 1116093 - conserved hypothetical protein InterPro IPR009056~KEGG: aba:Acid345_3000 hypothetical protein~SPTR: B9XE55 Putative uncharacterized protein~PFAM: Cytochrome c gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1023 Trad_1024 Trad_1024 Trad_1024 1116090 1116650 - conserved hypothetical protein KEGG: rrs:RoseRS_4142 hypothetical protein~SPTR: A5V0T3 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3341) gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1024 Trad_1025 Trad_1025 Trad_1025 1116650 1118074 - Polysulphide reductase NrfD COGs: COG5557 Polysulphide reductase~InterPro IPR005614~KEGG: cag:Cagg_3385 polysulphide reductase NrfD~PFAM: Polysulphide reductase NrfD~SPTR: B8G8V4 Polysulphide reductase NrfD~PFAM: Polysulphide reductase%2C NrfD gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1025 Trad_1026 Trad_1026 Trad_1026 1118074 1121106 - molybdopterin oxidoreductase%2C iron-sulfur binding subunit COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~InterPro IPR006311:IPR017896:IPR009010~KEGG: noc:Noc_1238 molybdopterin oxidoreductase%2C iron-sulfur binding subunit~SPTR: Q3JBQ7 Molybdopterin oxidoreductase%2C iron-sulfur binding subunit gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1026 Trad_1027 Trad_1027 Trad_1027 1121140 1121793 - conserved hypothetical protein InterPro IPR000095:IPR011031~KEGG: rrs:RoseRS_4139 hypothetical protein~SPTR: A5V0T0 Putative uncharacterized protein~PFAM: Class III cytochrome C family gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1027 Trad_1028 Trad_1028 Trad_1028 1122545 1123615 + Sua5/YciO/YrdC/YwlC family protein COGs: COG0009 Putative translation factor (SUA5)~InterProIPR004388:IPR010923:IPR006070:IPR017945:IPR 005145~KEGG: eba:ebA110 putative translation factor (SUA5)~PFAM: SUA5/yciO/yrdC domain%3B SUA5 domain protein~SPTR: Q5P925 Putative translation factor (SUA5)~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~manually curated~PFAM: yrdC domain%3B SUA5 domain~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1028 Trad_1029 Trad_1029 Trad_1029 1123846 1124364 + phosphoribosylaminoimidazole carboxylase%2C catalytic subunit COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase~InterPro IPR000031~KEGG: sus:Acid_5042 phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~PRIAM: Phosphoribosylaminoimidazole carboxylase~SPTR: Q01WG8 Phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: AIR carboxylase~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C PurE protein gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1029 Trad_1030 Trad_1030 Trad_1030 1124361 1125494 + phosphoribosylaminoimidazole carboxylase%2C ATPase subunit COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)~InterProIPR005875:IPR011761:IPR013817:IPR013816:IPR 016185:IPR011054:IPR006140:IPR003135~KEGG: sus:Acid_5043 phosphoribosylaminoimidazole carboxylase~PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp~PRIAM: Phosphoribosylaminoimidazole carboxylase~SPTR: Q01WG7 Phosphoribosylaminoimidazole carboxylase~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C ATPase subunit~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B ATP-grasp domain~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C PurK protein gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1030 Trad_1031 Trad_1031 Trad_1031 1125506 1127458 + alpha amylase catalytic region COGs: COG0366 Glycosidase~InterPro IPR006589:IPR013781:IPR017853:IPR006047~KEGG: dge:Dgeo_0572 alpha amylase%2C catalytic region~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: C1XLR7 Glycosidase~PFAM: Alpha amylase%2C catalytic domain gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1031 Trad_1032 Trad_1032 Trad_1032 1127675 1128040 - hypothetical protein KEGG: dia:Dtpsy_0676 diguanylate cyclase~SPTR: B9MDC4 Diguanylate cyclase gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1032 Trad_1033 Trad_1033 Trad_1033 1128277 1128675 + ribosomal protein S12 COGs: COG0048 Ribosomal protein S12~InterPro IPR005679:IPR006032:IPR012340:IPR016027~KEGG: dra:DR_0305 30S ribosomal protein S12~PFAM: ribosomal protein S12/S23~SPTR: Q9RXK7 30S ribosomal protein S12~TIGRFAM: ribosomal protein S12~PFAM: Ribosomal protein S12~TIGRFAM: ribosomal protein S12%2C bacterial/organelle gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1033 Trad_1034 Trad_1034 Trad_1034 1128684 1129154 + ribosomal protein S7 COGs: COG0049 Ribosomal protein S7~InterPro IPR005717:IPR000235~KEGG: dra:DR_0306 30S ribosomal protein S7~PFAM: ribosomal protein S7~SPTR: Q9RXK6 30S ribosomal protein S7~TIGRFAM: ribosomal protein S7~PFAM: Ribosomal protein S7p/S5e~TIGRFAM: ribosomal protein S7%2C bacterial/organelle gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1034 Trad_1035 Trad_1035 Trad_1035 1129327 1131399 + translation elongation factor G COGs: COG0480 Translation elongation factors (GTPase)~InterProIPR004540:IPR005225:IPR014721:IPR000640:IPR 020568:IPR009000:IPR009022:IPR000795:IPR004161:IPR005517~KEGG: ttj:TTHA1695 elongation factor G~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV%3B elongation factor G domain protein~SPTR: C1XTN3 Translation elongation factor 2 (EF-2/EF-G)~TIGRFAM: translation elongation factor G%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1035 Trad_1036 Trad_1036 Trad_1036 1131510 1132727 + translation elongation factor Tu COGs: COG0050 GTPase - translation elongation factors~InterProIPR004541:IPR005225:IPR009001:IPR009000:IPR 000795:IPR004161:IPR004160~KEGG: dra:DR_2050 elongation factor Tu~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain protein~SPTR: Q9R342 Elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor Tu C-terminal domain%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation elongation factor TU gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1036 Trad_1037 Trad_1037 Trad_1037 1132727 1133047 + ribosomal protein S10 COGs: COG0051 Ribosomal protein S10~InterPro IPR005731:IPR001848:IPR018268~KEGG: ddr:Deide_18960 putative 30S ribosomal protein S10~PFAM: ribosomal protein S10~SPTR: C1CXG7 30S ribosomal protein S10~TIGRFAM: ribosomal protein S10~PFAM: Ribosomal protein S10p/S20e~TIGRFAM: ribosomal protein S10%2C bacterial/organelle gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1037 Trad_1038 Trad_1038 Trad_1038 1133047 1133667 + 50S ribosomal protein L3 COGs: COG0087 Ribosomal protein L3~InterPro IPR019927:IPR009000:IPR019926:IPR000597~KEGG: dge:Dgeo_1867 50S ribosomal protein L3~PFAM: ribosomal protein L3~SPTR: Q1IX72 50S ribosomal protein L3~TIGRFAM: 50S ribosomal protein L3~PFAM: Ribosomal protein L3~TIGRFAM: 50S ribosomal protein L3%2C bacterial gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1038 Trad_1039 Trad_1039 Trad_1039 1133667 1134317 + ribosomal protein L4/L1e COGs: COG0088 Ribosomal protein L4~InterPro IPR002136~KEGG: dge:Dgeo_1866 50S ribosomal protein L4~PFAM: ribosomal protein L4/L1e~SPTR: Q1IX73 50S ribosomal protein L4~PFAM: Ribosomal protein L4/L1 family gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1039 Trad_1040 Trad_1040 Trad_1040 1134314 1134601 + Ribosomal protein L25/L23 COGs: COG0089 Ribosomal protein L23~InterPro IPR012677:IPR012678:IPR013025~KEGG: ttj:TTHA1690 50S ribosomal protein L23~PFAM: Ribosomal protein L25/L23~SPTR: C1XH57 LSU ribosomal protein L23P~PFAM: Ribosomal protein L23 gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1040 Trad_1041 Trad_1041 Trad_1041 1134611 1135447 + ribosomal protein L2 COGs: COG0090 Ribosomal protein L2~InterProIPR005880:IPR002171:IPR012340:IPR014722:IPR 008991:IPR016027~KEGG: dge:Dgeo_1864 50S ribosomal protein L2~PFAM: ribosomal protein L2~SPTR: B7A558 Ribosomal protein L2~TIGRFAM: ribosomal protein L2~PFAM: Ribosomal Proteins L2%2C RNA binding domain%3B Ribosomal Proteins L2%2C C-terminal domain~TIGRFAM: ribosomal protein L2%2C bacterial/organellar gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1041 Trad_1042 Trad_1042 Trad_1042 1135447 1135719 + ribosomal protein S19 COGs: COG0185 Ribosomal protein S19~InterPro IPR005732:IPR002222~KEGG: dge:Dgeo_1863 30S ribosomal protein S19~PFAM: ribosomal protein S19/S15~SPTR: Q1IX76 30S ribosomal protein S19~TIGRFAM: ribosomal protein S19~PFAM: Ribosomal protein S19~TIGRFAM: ribosomal protein S19%2C bacterial/organelle gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1042 Trad_1043 Trad_1043 Trad_1043 1135719 1136057 + ribosomal protein L22 COGs: COG0091 Ribosomal protein L22~InterPro IPR005727:IPR001063:IPR018260~KEGG: ttj:TTHA1687 50S ribosomal protein L22~PFAM: ribosomal protein L22/L17~SPTR: P48286 50S ribosomal protein L22~TIGRFAM: ribosomal protein L22~PFAM: Ribosomal protein L22p/L17e~TIGRFAM: ribosomal protein L22%2C bacterial type gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1043 Trad_1044 Trad_1044 Trad_1044 1136060 1136854 + ribosomal protein S3 COGs: COG0092 Ribosomal protein S3~InterProIPR004087:IPR005704:IPR004088:IPR004044:IPR 015946:IPR001351:IPR009019:IPR018280:IPR008282~KEGG: dge:Dgeo_1861 30S ribosomal protein S3~PFAM: ribosomal protein S3- domain protein%3B Ribosomal protein S3 domain%3B KH type 2 domain protein~SMART: KH domain protein~SPTR: Q1IX78 30S ribosomal protein S3~TIGRFAM: ribosomal protein S3~PFAM: KH domain%3B Ribosomal protein S3%2C C-terminal domain%3B Ribosomal protein S3%2C N-terminal domain~TIGRFAM: ribosomal protein S3%2C bacterial type%3B ribosomal protein S3%2C eukaryotic/archaeal type gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1044 Trad_1045 Trad_1045 Trad_1045 1136854 1137279 + ribosomal protein L16 COGs: COG0197 Ribosomal protein L16/L10E~InterPro IPR000114:IPR016180:IPR020798~KEGG: dge:Dgeo_1860 50S ribosomal protein L16~PFAM: Ribosomal protein L10e/L16~SPTR: Q1IX79 50S ribosomal protein L16~TIGRFAM: ribosomal protein L16~PFAM: Ribosomal protein L16p/L10e~TIGRFAM: ribosomal protein L16%2C bacterial/organelle gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1045 Trad_1046 Trad_1046 Trad_1046 1137266 1137460 + ribosomal protein L29 InterPro IPR001854:IPR018254~KEGG: dra:DR_0319 50S ribosomal protein L29~PFAM: ribosomal protein L29~SPTR: Q9RXJ4 50S ribosomal protein L29~TIGRFAM: ribosomal protein L29~PFAM: Ribosomal L29 protein~TIGRFAM: ribosomal protein L29 gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1046 Trad_1047 Trad_1047 Trad_1047 1137457 1137702 + 30S ribosomal protein S17 COGs: COG0186 Ribosomal protein S17~InterPro IPR019984:IPR000266:IPR012340:IPR016027~KEGG: dge:Dgeo_1858 ribosomal protein S17~PFAM: ribosomal protein S17~SPTR: Q9RXJ3 30S ribosomal protein S17~TIGRFAM: 30S ribosomal protein S17~PFAM: Ribosomal protein S17~TIGRFAM: 30S ribosomal protein S17 gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1047 Trad_1048 Trad_1048 Trad_1048 1137712 1138080 + ribosomal protein L14 COGs: COG0093 Ribosomal protein L14~InterPro IPR005745:IPR000218:IPR019972~KEGG: ttj:TTHA1682 50S ribosomal protein L14~PFAM: ribosomal protein L14b/L23e~SPTR: C1XTJ2 50S ribosomal protein L14~TIGRFAM: ribosomal protein L14~PFAM: Ribosomal protein L14p/L23e~TIGRFAM: ribosomal protein L14%2C bacterial/organelle gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1048 Trad_1049 Trad_1049 Trad_1049 1138080 1138415 + ribosomal protein L24 COGs: COG0198 Ribosomal protein L24~InterProIPR005824:IPR003256:IPR014723:IPR008991:IPR 005825~KEGG: sad:SAAV_2301 50S ribosomal protein L24~PFAM: KOW domain protein~SMART: KOW domain protein~SPTR: D1GRK7 50S ribosomal protein L24~TIGRFAM: ribosomal protein L24~PFAM: KOW motif~TIGRFAM: ribosomal protein L24%2C bacterial/organelle gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1049 Trad_1050 Trad_1050 Trad_1050 1138423 1138974 + ribosomal protein L5 COGs: COG0094 Ribosomal protein L5~InterPro IPR002132~KEGG: ttj:TTHA1680 50S ribosomal protein L5~PFAM: ribosomal protein L5~SPTR: B7A567 50S ribosomal protein L5~PFAM: ribosomal L5P family C-terminus%3B Ribosomal protein L5 gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1050 Trad_1051 Trad_1051 Trad_1051 1138979 1139164 + ribosomal protein S14 COGs: COG0199 Ribosomal protein S14~InterPro IPR018271:IPR001209~KEGG: hor:Hore_01300 ribosomal protein S14~PFAM: ribosomal protein S14~SPTR: B8D0D7 30S ribosomal protein S14 type Z~PFAM: Ribosomal protein S14p/S29e gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1051 Trad_1052 Trad_1052 Trad_1052 1139239 1139634 + ribosomal protein S8 COGs: COG0096 Ribosomal protein S8~InterPro IPR000630~KEGG: ttj:TTHA1678 30S ribosomal protein S8~PFAM: ribosomal protein S8~SPTR: C1XTJ6 SSU ribosomal protein S8P~PFAM: Ribosomal protein S8 gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1052 Trad_1053 Trad_1053 Trad_1053 1139634 1140173 + ribosomal protein L6 COGs: COG0097 Ribosomal protein L6P/L9E~InterPro IPR019906:IPR000702:IPR020040~KEGG: dra:DR_2111 50S ribosomal protein L6~PFAM: Ribosomal protein L6%2C alpha-beta domain~SPTR: Q9RSL3 50S ribosomal protein L6~TIGRFAM: ribosomal protein L6~PFAM: Ribosomal protein L6~TIGRFAM: ribosomal protein L6%2C bacterial type gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1053 Trad_1054 Trad_1054 Trad_1054 1140185 1140532 + ribosomal protein L18 COGs: COG0256 Ribosomal protein L18~InterPro IPR004389:IPR005484~KEGG: ttj:TTHA1676 50S ribosomal protein L18~PFAM: ribosomal protein L18P/L5E~SPTR: P80320 50S ribosomal protein L18~TIGRFAM: ribosomal protein L18~PFAM: Ribosomal L18p/L5e family~TIGRFAM: ribosomal protein L18%2C bacterial type gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1054 Trad_1055 Trad_1055 Trad_1055 1140532 1141005 + ribosomal protein S5 COGs: COG0098 Ribosomal protein S5~InterProIPR005712:IPR013810:IPR014720:IPR014721:IPR 020568:IPR018192:IPR005324~KEGG: dge:Dgeo_1850 30S ribosomal protein S5~PFAM: Ribosomal protein S5 %3B ribosomal protein S5 domain protein~SPTR: B7A572 Ribosomal protein S5~TIGRFAM: ribosomal protein S5~PFAM: Ribosomal protein S5%2C N-terminal domain%3B Ribosomal protein S5%2C C-terminal domain~TIGRFAM: ribosomal protein S5%2C bacterial/organelle type gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1055 Trad_1056 Trad_1056 Trad_1056 1141002 1141169 + ribosomal protein L30 COGs: COG1841 Ribosomal protein L30/L7E~InterPro IPR005996:IPR016082:IPR000517~KEGG: cti:RALTA_A2925 50S ribosomal protein L30~PFAM: ribosomal protein L30~SPTR: C6BFT3 Ribosomal protein L30~TIGRFAM: ribosomal protein L30~PFAM: Ribosomal protein L30p/L7e~TIGRFAM: ribosomal protein L30%2C bacterial/organelle gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1056 Trad_1057 Trad_1057 Trad_1057 1141166 1141660 + ribosomal protein L15 COGs: COG0200 Ribosomal protein L15~InterPro IPR005749:IPR000897:IPR001196~KEGG: dge:Dgeo_1848 50S ribosomal protein L15~PFAM: ribosomal protein L15~SPTR: Q1IX91 50S ribosomal protein L15~TIGRFAM: ribosomal protein L15~PFAM: Ribosomal protein L18e/L15~TIGRFAM: ribosomal protein L15%2C bacterial/organelle gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1057 Trad_1058 Trad_1058 Trad_1058 1141661 1142980 + preprotein translocase%2C SecY subunit COGs: COG0201 Preprotein translocase subunit SecY~InterPro IPR002208~KEGG: ttj:TTHA1672 preprotein translocase subunit SecY~PFAM: SecY protein~SPTR: B7A575 Preprotein translocase%2C SecY subunit~TIGRFAM: preprotein translocase%2C SecY subunit~PFAM: eubacterial secY protein~TIGRFAM: preprotein translocase%2C SecY subunit gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1058 Trad_1059 Trad_1059 Trad_1059 1142980 1143567 + adenylate kinase COGs: COG0563 Adenylate kinase and related kinase~InterPro IPR006259:IPR000850~KEGG: ddr:Deide_18740 putative adenylate kinase~PFAM: adenylate kinase~SPTR: C1CXE5 Adenylate kinase~TIGRFAM: adenylate kinase~PFAM: Adenylate kinase~TIGRFAM: adenylate kinases gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1059 Trad_1060 Trad_1060 Trad_1060 1143564 1144358 + methionine aminopeptidase%2C type I COGs: COG0024 Methionine aminopeptidase~InterPro IPR002467:IPR000994:IPR001714~KEGG: chy:CHY_2288 methionine aminopeptidase%2C type I~PFAM: peptidase M24~SPTR: B7A577 Methionine aminopeptidase~TIGRFAM: methionine aminopeptidase%2C type I~PFAM: Metallopeptidase family M24~TIGRFAM: methionine aminopeptidase%2C type I gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1060 Trad_1061 Trad_1061 Trad_1061 1144348 1144635 + translation initiation factor IF-1 COGs: COG0361 Translation initiation factor 1 (IF-1)~InterPro IPR004368:IPR006196:IPR012340:IPR016027~KEGG: ttj:TTHA1669 translation initiation factor IF-1~PFAM: S1 IF1 family protein~SPTR: C1XTK5 Bacterial translation initiation factor 1 (BIF-1)~TIGRFAM: translation initiation factor IF-1~PFAM: Translation initiation factor 1A / IF-1~TIGRFAM: translation initiation factor IF-1 gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1061 Trad_1062 Trad_1062 Trad_1062 1144666 1144782 + ribosomal protein L36 InterPro IPR000473~KEGG: lga:LGAS_0313 50S ribosomal protein L36~PFAM: ribosomal protein L36~SPTR: D0DIM9 50S ribosomal protein L36~TIGRFAM: ribosomal protein L36~PFAM: Ribosomal protein L36~TIGRFAM: ribosomal protein L36%2C bacterial type gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1062 Trad_1063 Trad_1063 Trad_1063 1144784 1145164 + 30S ribosomal protein S13 COGs: COG0099 Ribosomal protein S13~InterPro IPR019980:IPR001892:IPR010979:IPR018269~KEGG: dge:Dgeo_1843 30S ribosomal protein S13~PFAM: ribosomal protein S13~SPTR: Q1IX96 30S ribosomal protein S13~TIGRFAM: 30S ribosomal protein S13~PFAM: Ribosomal protein S13/S18~TIGRFAM: 30S ribosomal protein S13 gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1063 Trad_1064 Trad_1064 Trad_1064 1145174 1145569 + 30S ribosomal protein S11 COGs: COG0100 Ribosomal protein S11~InterPro IPR019981:IPR001971:IPR018102~KEGG: dge:Dgeo_1842 30S ribosomal protein S11~PFAM: ribosomal protein S11~SPTR: Q1IX97 30S ribosomal protein S11~TIGRFAM: 30S ribosomal protein S11~PFAM: Ribosomal protein S11~TIGRFAM: 30S ribosomal protein S11 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1064 Trad_1065 Trad_1065 Trad_1065 1145656 1146273 + ribosomal protein S4 COGs: COG0522 Ribosomal protein S4 and related protein~InterPro IPR002942:IPR005709:IPR018079:IPR001912~KEGG: dge:Dgeo_1841 30S ribosomal protein S4~PFAM: RNA-binding S4 domain protein%3B ribosomal protein S4~SMART: RNA-binding S4 domain protein~SPTR: Q1IX98 30S ribosomal protein S4~TIGRFAM: ribosomal protein S4~PFAM: Ribosomal protein S4/S9 N-terminal domain%3B S4 domain~TIGRFAM: ribosomal protein S4%2C bacterial/organelle type gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1065 Trad_1066 Trad_1066 Trad_1066 1146297 1147229 + DNA-directed RNA polymerase%2C alpha subunit COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit~InterProIPR011263:IPR011773:IPR011260:IPR011262:IPR 009025:IPR011261~KEGG: ddr:Deide_18630 putative DNA-directed RNA polymerase alpha chain (DNA-dependent RNA polymerase)~PFAM: RNA polymerase insert%3B RNA polymerase dimerisation%3B RNA polymerase alpha subunit domain protein~SMART: RNA polymerase RpoA/D/Rpb3-type~SPTR: C1CXD4 Putative DNA-directed RNA polymerase alpha chain (DNA-dependent RNA polymerase)~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain%3B RNA polymerase Rpb3/RpoA insert domain%3B Bacterial RNA polymerase%2C alpha chain C terminal domain~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit%2C bacterial and chloroplast-type gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1066 Trad_1067 Trad_1067 Trad_1067 1147323 1147685 + ribosomal protein L17 COGs: COG0203 Ribosomal protein L17~InterPro IPR000456~KEGG: ddr:Deide_18620 putative 50S ribosomal protein L17~PFAM: ribosomal protein L17~SPTR: C1CXD3 50S ribosomal protein L17~TIGRFAM: ribosomal protein L17~PFAM: Ribosomal protein L17~TIGRFAM: ribosomal protein L17 gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1067 Trad_1068 Trad_1068 Trad_1068 1147770 1148426 + conserved hypothetical protein KEGG: dge:Dgeo_2739 hypothetical protein~SPTR: Q1J2W2 Putative uncharacterized protein gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1068 Trad_1069 Trad_1069 Trad_1069 1148409 1149575 - phosphopentomutase COGs: COG1015 Phosphopentomutase~InterPro IPR010045:IPR017850:IPR013553:IPR006124~KEGG: dge:Dgeo_0586 phosphopentomutase~PFAM: Phosphopentomutase domain protein%3B metalloenzyme domain protein~PRIAM: Phosphopentomutase~SPTR: Q1J0U6 Phosphopentomutase~TIGRFAM: phosphopentomutase~PFAM: Metalloenzyme superfamily~TIGRFAM: phosphopentomutase gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1069 Trad_1070 Trad_1070 Trad_1070 1149589 1150392 - ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: fra:Francci3_0199 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q2JGK3 ABC transporter related~PFAM: ABC transporter gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1070 Trad_1071 Trad_1071 Trad_1071 1150412 1152643 - protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: rce:RC1_1640 macrolide-specific ABC-type efflux carrier~PFAM: protein of unknown function DUF214~SPTR: B6INE5 Macrolide-specific ABC-type efflux carrier~PFAM: Predicted permease gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1071 Trad_1072 Trad_1072 Trad_1072 1152650 1153231 - hypothetical protein KEGG: hypothetical protein~SPTR: Q4P324 Putative uncharacterized protein gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1072 Trad_1073 Trad_1073 Trad_1073 1153242 1154312 - hypothetical protein KEGG: si660056a04%3B LOC100281292~SPTR: C9Z227 Putative FtsK/SpoIIIE family protein gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1073 Trad_1074 Trad_1074 Trad_1074 1154637 1155395 - hypothetical protein InterPro IPR012336~KEGG: cbe:Cbei_0776 thioredoxin~SPTR: C1XSC7 Putative uncharacterized protein gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1074 Trad_1075 Trad_1075 Trad_1075 1155515 1156048 - transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR000792:IPR011991:IPR016032~KEGG: dra:DR_C0012 GerE family transcriptional regulator~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~SPTR: B7AC48 Transcriptional regulator%2C LuxR family~PFAM: Bacterial regulatory proteins%2C luxR family gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1075 Trad_1076 Trad_1076 Trad_1076 1156145 1157815 + tRNA(Ile)-lysidine synthetase COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~InterProIPR012795:IPR012796:IPR014729:IPR016193:IPR 016192:IPR011063:IPR002125~KEGG: dge:Dgeo_0991 tRNA(Ile)-lysidine synthetase-like protein~PFAM: PP-loop domain protein%3B CMP/dCMP deaminase zinc-binding~SPTR: Q1IZP3 tRNA(Ile)-lysidine synthetase-like protein and cytosine deaminase~TIGRFAM: tRNA(Ile)-lysidine synthetase~PFAM: TilS substrate C-terminal domain%3B PP-loop family%3B Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: tRNA(Ile)-lysidine synthetase%2C C-terminal domain%3B tRNA(Ile)-lysidine synthetase%2C N-terminal domain gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1076 Trad_1077 Trad_1077 Trad_1077 1157886 1158287 + iron-sulfur cluster assembly accessory protein COGs: COG0316 conserved hypothetical protein~InterPro IPR016092:IPR000361:IPR017870~KEGG: dge:Dgeo_0323 HesB/YadR/YfhF~PFAM: HesB/YadR/YfhF-family protein~SPTR: Q1J1K8 HesB/YadR/YfhF~TIGRFAM: iron-sulfur cluster assembly accessory protein~PFAM: Iron-sulphur cluster biosynthesis~TIGRFAM: Iron-sulfur cluster assembly accessory protein gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1077 Trad_1078 Trad_1078 Trad_1078 1158360 1159865 - aminotransferase class V COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain~InterPro IPR015421:IPR015424:IPR000192~KEGG: tth:TTC0151 glycine dehydrogenase subunit 2~PFAM: aminotransferase class V~SPTR: C1XQU9 Glycine dehydrogenase (Decarboxylating) beta subunit~PFAM: Glycine cleavage system P-protein gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1078 Trad_1079 Trad_1079 Trad_1079 1159862 1161220 - Glycine dehydrogenase (decarboxylating) COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain~InterPro IPR015421:IPR015424:IPR020580~KEGG: ttj:TTHA0525 glycine dehydrogenase subunit 1~PFAM: Glycine cleavage system P-protein-like~PRIAM: Glycine dehydrogenase (decarboxylating)~SPTR: Q72LA9 Glycine dehydrogenase~PFAM: Glycine cleavage system P-protein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1079 Trad_1080 Trad_1080 Trad_1080 1161217 1161600 - glycine cleavage system H protein COGs: COG0509 Glycine cleavage system H protein (lipoate-binding)~InterProIPR017453:IPR000089:IPR011053:IPR003016:IPR 002930~KEGG: tth:TTC0149 glycine cleavage system protein H~PFAM: glycine cleavage H-protein~SPTR: B7A6K6 Glycine cleavage system H protein~TIGRFAM: glycine cleavage system H protein~PFAM: Glycine cleavage H-protein~TIGRFAM: glycine cleavage system H protein gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1080 Trad_1081 Trad_1081 Trad_1081 1161828 1162916 - glycine cleavage system T protein COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase)~InterPro IPR006223:IPR006222:IPR013977~KEGG: dge:Dgeo_1905 glycine cleavage system T protein~PFAM: glycine cleavage T protein (aminomethyl transferase)%3B Glycine cleavage T-protein barrel~SPTR: C1XJS7 Aminomethyltransferase~TIGRFAM: glycine cleavage system T protein~PFAM: Aminomethyltransferase folate-binding domain%3B Glycine cleavage T-protein C-terminal barrel domain~TIGRFAM: sarcosine oxidase%2C gamma subunit family%2C heterotetrameric form%3B glycine cleavage system T protein gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1081 Trad_1082 Trad_1082 Trad_1082 1163020 1163610 - gliding motility protein COGs: COG2229 GTPase~KEGG: tth:TTC0767 gliding motility protein~SPTR: C1XJS6 Predicted GTPase%2C COG2229~PFAM: ADP-ribosylation factor family~TIGRFAM: small GTP-binding protein domain gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1082 Trad_1083 Trad_1083 Trad_1083 1164050 1164559 + conserved hypothetical protein KEGG: ddr:Deide_05350 hypothetical protein~SPTR: C1D0J9 Putative uncharacterized protein~PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1083 Trad_1084 Trad_1084 Trad_1084 1164556 1165026 - ATP-cone domain protein COGs: COG1327 transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains~InterPro IPR003796:IPR005144~KEGG: ttj:TTHA0134 transcriptional regulator NrdR~PFAM: ATP-cone domain protein~SPTR: B7AC85 ATP-cone domain protein~PFAM: ATP cone domain~TIGRFAM: transcriptional regulator NrdR gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1084 Trad_1085 Trad_1085 Trad_1085 1165282 1166133 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR016040:IPR002198~KEGG: ttj:TTHA0133 short chain dehydrogenase/reductase family oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C1XS35 Putative uncharacterized protein~PFAM: short chain dehydrogenase gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1085 Trad_1086 Trad_1086 Trad_1086 1166393 1167277 + acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit COGs: COG0777 Acetyl-CoA carboxylase beta subunit~InterPro IPR000438:IPR011762:IPR000022~KEGG: dra:DR_1215 acetyl-CoA carboxylase carboxyl transferase%2C beta subunit~PFAM: carboxyl transferase~SPTR: Q9RV15 Acetyl-CoA carboxylase carboxyl transferase%2C beta subunit~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~PFAM: Carboxyl transferase domain~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1086 Trad_1087 Trad_1087 Trad_1087 1167261 1168211 + acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit COGs: COG0825 Acetyl-CoA carboxylase alpha subunit~InterPro IPR001095:IPR011763:IPR020582~KEGG: ttj:TTHA1767 acetyl-CoA carboxylase carboxyl transferase%2C alpha subunit (AccA)~PFAM: Acetyl-CoA carboxylase%2C alpha subunit%2C conserved region~PRIAM: Acetyl-CoA carboxylase~SPTR: B7A5V2 Acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1087 Trad_1088 Trad_1088 Trad_1088 1168313 1169017 - ribulose-phosphate 3-epimerase COGs: COG0036 Pentose-5-phosphate-3-epimerase~InterPro IPR000056:IPR013785:IPR011060~KEGG: gur:Gura_0194 ribulose-phosphate 3-epimerase~PFAM: ribulose-phosphate 3-epimerase~PRIAM: Ribulose-phosphate 3-epimerase~SPTR: A5GDD1 Ribulose-5-phosphate 3-epimerase~TIGRFAM: ribulose-phosphate 3-epimerase~PFAM: Ribulose-phosphate 3 epimerase family~TIGRFAM: ribulose-phosphate 3-epimerase gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1088 Trad_1089 Trad_1089 Trad_1089 1169040 1169852 - SNARE associated Golgi protein-like protein COGs: COG0398 conserved hypothetical protein~InterPro IPR015414~KEGG: noc:Noc_1842 hypothetical protein~PFAM: SNARE associated Golgi protein~SPTR: Q3JA37 Putative uncharacterized protein~PFAM: SNARE associated Golgi protein gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1089 Trad_1090 Trad_1090 Trad_1090 1170133 1171002 + Thiosulfate sulfurtransferase COGs: COG2897 Rhodanese-related sulfurtransferase~InterPro IPR001763:IPR001307~KEGG: ttj:TTHA1028 thiosulfate sulfurtransferase~PFAM: Rhodanese domain protein~PRIAM: Thiosulfate sulfurtransferase~SMART: Rhodanese domain protein~SPTR: C1XQ25 Rhodanese-related sulfurtransferase~PFAM: Rhodanese-like domain gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1090 Trad_1091 Trad_1091 Trad_1091 1171197 1172441 - oxidoreductase molybdopterin binding protein COGs: COG2041 Sulfite oxidase~InterPro IPR000572:IPR005066:IPR014756:IPR008335~KEGG: tth:TTC0961 sulfite reductase~PFAM: oxidoreductase molybdopterin binding%3B Mo-co oxidoreductase dimerisation domain~SPTR: C1XLD9 Sulfite oxidase-like oxidoreductase~PFAM: Mo-co oxidoreductase dimerisation domain%3B Oxidoreductase molybdopterin binding domain gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1091 Trad_1092 Trad_1092 Trad_1092 1172475 1172915 + transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: chu:CHU_0197 BadM/Rrf2 family transcriptional regulator~PFAM: protein of unknown function UPF0074~SPTR: Q11YM7 Transcriptional regulator%2C BadM/Rrf2 family~TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: Transcriptional regulator~TIGRFAM: rrf2 family protein (putative transcriptional regulator) gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1092 Trad_1093 Trad_1093 Trad_1093 1173177 1174286 + Alkanesulfonate monooxygenase COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase~InterPro IPR011251:IPR016048~KEGG: npu:Npun_R1859 luciferase family protein~PFAM: Luciferase-like%2C subgroup~PRIAM: Alkanesulfonate monooxygenase~SPTR: B2J2T5 Luciferase family protein~PFAM: Luciferase-like monooxygenase gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1093 Trad_1094 Trad_1094 Trad_1094 1174421 1176130 + Tetratricopeptide TPR_2 repeat protein InterPro IPR019734:IPR013026:IPR011990:IPR013105~KEGG: tth:TTC0579 hypothetical protein~PFAM: Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide repeat~SPTR: Q72K39 Hypothetical conserved protein~PFAM: Tetratricopeptide repeat gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1094 Trad_1095 Trad_1095 Trad_1095 1176132 1176266 - hypothetical protein gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1095 Trad_1096 Trad_1096 Trad_1096 1177685 1178236 + hypothetical protein KEGG: mst:Msp_0145 asn/thr-rich large protein family protein~SPTR: Q2NHS0 Member of asn/thr-rich large protein family gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1096 Trad_1097 Trad_1097 Trad_1097 1178492 1179808 - 4-aminobutyrate aminotransferase COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase~InterPro IPR004632:IPR015421:IPR015424:IPR005814~KEGG: tmz:Tmz1t_0429 4-aminobutyrate aminotransferase~PFAM: aminotransferase class-III~SPTR: C1XPP3 4-aminobutyrate aminotransferase~TIGRFAM: 4-aminobutyrate aminotransferase~PFAM: Aminotransferase class-III~TIGRFAM: 4-aminobutyrate aminotransferase%2C prokaryotic type gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1097 Trad_1098 Trad_1098 Trad_1098 1179988 1180650 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 COGs: COG0637 phosphatase/phosphohexomutase~InterPro IPR006402:IPR005833:IPR005834~KEGG: bxe:Bxe_B1761 HAD family hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: Q13NY2 HAD-superfamily hydrolase%2C subfamily IA%2C variant3~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1098 Trad_1099 Trad_1099 Trad_1099 1181032 1182246 - secretory lipase InterPro IPR005152~KEGG: svi:Svir_38210 acetyl esterase (deacetylase)~PFAM: secretory lipase~SPTR: C7MRH9 Acetyl esterase (Deacetylase)~PFAM: Secretory lipase gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1099 Trad_1100 Trad_1100 Trad_1100 1182466 1182936 + hypothetical protein KEGG: oih:OB0597 hypothetical protein~SPTR: C1XHG7 Putative uncharacterized protein gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1100 Trad_1101 Trad_1101 Trad_1101 1183011 1183811 + protein of unknown function DUF548 InterPro IPR007536~KEGG: pag:PLES_13041 hypothetical protein~PFAM: protein of unknown function DUF548~SPTR: A3KXV2 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF548) gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1101 Trad_1102 Trad_1102 Trad_1102 1184227 1185708 + fumarate reductase/succinate dehydrogenase flavoprotein domain protein COGs: COG1233 Phytoene dehydrogenase and related protein~InterPro IPR003953~KEGG: rxy:Rxyl_2416 FAD dependent oxidoreductase~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein~SPTR: Q1ATD4 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1102 Trad_1103 Trad_1103 Trad_1103 1185691 1187091 - Fmu (Sun) domain protein COGs: COG0144 tRNA and rRNA cytosine-C5-methylase~InterPro IPR001678~KEGG: bbe:BBR47_43550 probable ribosomal RNA small subunit methyltransferase~PFAM: Fmu (Sun) domain protein~SPTR: C0ZI58 Probable ribosomal RNA small subunit methyltransferase~PFAM: NOL1/NOP2/sun family~TIGRFAM: NOL1/NOP2/sun family putative RNA methylase gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1103 Trad_1104 Trad_1104 Trad_1104 1187476 1188675 + nuclease SbcCD%2C D subunit COGs: COG0420 DNA repair exonuclease~InterPro IPR004593:IPR004843~KEGG: dge:Dgeo_0824 nuclease SbcCD%2C D subunit~PFAM: metallophosphoesterase~SPTR: Q1J058 Nuclease SbcCD%2C D subunit~TIGRFAM: nuclease SbcCD%2C D subunit~PFAM: Calcineurin-like phosphoesterase%3B Type 5 capsule protein repressor C terminal~TIGRFAM: exonuclease SbcD gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1104 Trad_1105 Trad_1105 Trad_1105 1188672 1191464 + SMC domain protein COGs: COG0419 ATPase involved in DNA repair~InterPro IPR018254:IPR003395~KEGG: dge:Dgeo_0823 SMC protein-like protein~PFAM: SMC domain protein~SPTR: Q1J059 SbcC%2C ATPase involved in DNA repair~TIGRFAM: exonuclease SbcC gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1105 Trad_1106 Trad_1106 Trad_1106 1191579 1191950 - hypothetical protein InterPro IPR017871~KEGG: efa:EF1032 daunorubicin resistance protein~SPTR: Q5VR15 Class III peroxidase 1 gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1106 Trad_1107 Trad_1107 Trad_1107 1192177 1193358 + Sporulation domain protein InterPro IPR007730~KEGG: dol:Dole_3214 sporulation domain-containing protein~PFAM: Sporulation domain protein~SPTR: A9A098 Sporulation domain protein~PFAM: Sporulation related domain gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1107 Trad_1108 Trad_1108 Trad_1108 1193510 1194523 - thioredoxin reductase COGs: COG0492 Thioredoxin reductase~InterPro IPR005982:IPR000103:IPR013027:IPR008255~KEGG: ttj:TTHA1920 thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: Q72HD8 Thioredoxin reductase~TIGRFAM: thioredoxin reductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: thioredoxin-disulfide reductase gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1108 Trad_1109 Trad_1109 Trad_1109 1195008 1195949 - glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: tro:trd_1593 dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol%2C A-3-L-rhamnosyl transferase~PFAM: glycosyl transferase family 2~SPTR: C1XIU9 Predicted glycosyltransferase~PFAM: Glycosyl transferase family 2 gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1109 Trad_1110 Trad_1110 Trad_1110 1196023 1197036 + Patatin COGs: COG1752 esterase of the alpha-beta hydrolase superfamily~InterPro IPR016035:IPR002641~KEGG: dau:Daud_1726 patatin~PFAM: Patatin~SPTR: B1I5C7 Patatin~PFAM: Patatin-like phospholipase gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1110 Trad_1111 Trad_1111 Trad_1111 1197234 1197863 - phosphoribosyltransferase COGs: COG1040 amidophosphoribosyltransferase~InterPro IPR000836~KEGG: dge:Dgeo_0938 competence protein ComF%2C putative~PFAM: phosphoribosyltransferase~SPTR: Q1IZU5 Competence protein ComF%2C putative~PFAM: Phosphoribosyl transferase domain~TIGRFAM: comF family protein gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1111 Trad_1112 Trad_1112 Trad_1112 1197956 1198972 - Polyprenyl synthetase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR008949:IPR000092~KEGG: dge:Dgeo_1618 polyprenyl synthetase~PFAM: Polyprenyl synthetase~SPTR: Q1IXX1 Polyprenyl synthetase~PFAM: Polyprenyl synthetase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1112 Trad_1113 Trad_1113 Trad_1113 1199403 1200338 + conserved hypothetical protein KEGG: ttj:TTHA1126 hypothetical protein~SPTR: Q72JL1 Hypothetical conserved protein gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1113 Trad_1114 Trad_1114 Trad_1114 1200511 1201068 + translation elongation factor P COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)~InterProIPR011768:IPR020599:IPR014722:IPR012340:IPR 016027:IPR008991:IPR013852:IPR013185:IPR001059:IPR015365~KEGG: dge:Dgeo_0468 elongation factor P~PFAM: Elongation factor P %3B Elongation factor P/YeiP protein%3B Elongation factor KOW domain protein~SPTR: Q1J163 Elongation factor P~TIGRFAM: translation elongation factor P~PFAM: Elongation factor P%2C C-terminal%3B Elongation factor P (EF-P) KOW-like domain%3B Elongation factor P (EF-P) OB domain~TIGRFAM: translation elongation factor P gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1114 Trad_1115 Trad_1115 Trad_1115 1201114 1201590 + acetyl-CoA carboxylase%2C biotin carboxyl carrier protein COGs: COG0511 Biotin carboxyl carrier protein~InterPro IPR001249:IPR000089:IPR011053~KEGG: ttj:TTHA1124 acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~PFAM: biotin/lipoyl attachment domain-containing protein~SPTR: B7AAF2 Acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~PFAM: Biotin-requiring enzyme~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1115 Trad_1116 Trad_1116 Trad_1116 1201712 1203049 + acetyl-CoA carboxylase%2C biotin carboxylase COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit~InterProIPR004549:IPR011761:IPR011764:IPR013817:IPR 013816:IPR016185:IPR011054:IPR005479:IPR005481:IPR005482~KEGG: ttj:TTHA1123 acetyl-CoA carboxylase%2C biotin carboxylase subunit~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein~SPTR: B7AAF3 Acetyl-CoA carboxylase%2C biotin carboxylase~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B Biotin carboxylase C-terminal domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1116 Trad_1117 Trad_1117 Trad_1117 1203083 1203505 + protein of unknown function DUF322 COGs: COG1302 conserved hypothetical protein~InterPro IPR005531~KEGG: dge:Dgeo_0697 hypothetical protein~PFAM: protein of unknown function DUF322~SPTR: C1XPK3 Uncharacterized conserved protein~PFAM: Protein of unknown function (DUF322) gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1117 Trad_1118 Trad_1118 Trad_1118 1203498 1203995 + NusB antitermination factor COGs: COG0781 Transcription termination factor~InterPro IPR011605:IPR006027~KEGG: ttj:TTHA1121 N-utilization substance protein B~PFAM: NusB/RsmB/TIM44~SPTR: B7AAF5 NusB antitermination factor~TIGRFAM: transcription antitermination factor NusB~PFAM: NusB family~TIGRFAM: transcription antitermination factor NusB gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1118 Trad_1119 Trad_1119 Trad_1119 1203997 1204854 + Methylenetetrahydrofolate dehydrogenase (NADP(+)) COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase~InterPro IPR016040:IPR000672:IPR020630:IPR020631~KEGG: tth:TTC0755 methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain~PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+))~SPTR: C1XHV3 5%2C10-methylenetetrahydrofolate dehydrogenase (NADP+)%3B methenyltetrahydrofolate cyclohydrolase~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1119 Trad_1120 Trad_1120 Trad_1120 1204851 1205951 + Glutamine--scyllo-inositol transaminase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR000653:IPR015421:IPR015422:IPR015424~KEGG: tth:TTC0284 pleiotropic regulatory protein~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~PRIAM: Glutamine--scyllo-inositol transaminase~SPTR: Q72KY1 Pleiotropic regulatory protein~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1120 Trad_1121 Trad_1121 Trad_1121 1206060 1206998 + metal dependent phosphohydrolase COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain~InterPro IPR003607:IPR006674~KEGG: kol:Kole_1803 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: C5CFZ3 Metal dependent phosphohydrolase~PFAM: HD domain gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1121 Trad_1122 Trad_1122 Trad_1122 1207541 1208623 - peptidase M29 aminopeptidase II COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T)~InterPro IPR000787~KEGG: ddr:Deide_09610 putative aminopeptidase~PFAM: peptidase M29 aminopeptidase II~SPTR: C1CUH2 Putative aminopeptidase~PFAM: Thermophilic metalloprotease (M29) gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1122 Trad_1123 Trad_1123 Trad_1123 1208683 1209117 - thioesterase superfamily protein COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism~InterPro IPR003736:IPR006683~KEGG: psa:PST_0538 hypothetical protein~PFAM: thioesterase superfamily protein~SPTR: A4VGZ3 Putative uncharacterized protein~PFAM: Thioesterase superfamily~TIGRFAM: uncharacterized domain 1 gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1123 Trad_1124 Trad_1124 Trad_1124 1209394 1211868 + PKD domain containing protein COGs: COG2133 Glucose/sorbosone dehydrogenase~InterPro IPR000601:IPR011042:IPR011041:IPR016160~KEGG: hau:Haur_1249 PKD domain-containing protein~PFAM: PKD domain containing protein~SMART: PKD domain containing protein~SPTR: C1RME6 Glucose/sorbosone dehydrogenase~PFAM: Glucose / Sorbosone dehydrogenase%3B PKD domain gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1124 Trad_1125 Trad_1125 Trad_1125 1211953 1212855 + aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395:IPR020471~KEGG: ddr:Deide_07880 putative oxidoreductase~PFAM: aldo/keto reductase~SPTR: C1D1C8 Putative oxidoreductase~PFAM: Aldo/keto reductase family gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1125 Trad_1126 Trad_1126 Trad_1126 1212889 1213731 + Abortive infection protein InterPro IPR003675~KEGG: rrs:RoseRS_1918 abortive infection protein~PFAM: Abortive infection protein~SPTR: A5UUK4 Abortive infection protein~PFAM: CAAX amino terminal protease family gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1126 Trad_1127 Trad_1127 Trad_1127 1214032 1215141 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: ttj:TTHA1338 ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B7A5S4 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1127 Trad_1128 Trad_1128 Trad_1128 1215134 1216054 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: ttj:TTHA1337 peptide ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B7A5S5 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1128 Trad_1129 Trad_1129 Trad_1129 1216205 1217722 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: ttj:TTHA1336 peptide ABC transporter oligopeptide-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: B7A5S6 4-phytase~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1129 Trad_1130 Trad_1130 Trad_1130 1218141 1219544 - protein of unknown function DUF512 COGs: COG1625 Fe-S oxidoreductase related to NifB/MoaA family~InterPro IPR001478:IPR007197:IPR007549~KEGG: dra:DR_2521 hypothetical protein~PFAM: protein of unknown function DUF512%3B Radical SAM domain protein~SPTR: Q9RRH0 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF512)~TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1130 Trad_1131 Trad_1131 Trad_1131 1219629 1220132 - hypothetical protein InterPro IPR010916~KEGG: tbd:Tbd_1612 flagellar biosynthesis protein FliR~SPTR: B8L3Z2 Putative uncharacterized protein gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1131 Trad_1132 Trad_1132 Trad_1132 1220238 1220741 + transcriptional regulator%2C MarR family InterPro IPR000835:IPR011991~KEGG: aba:Acid345_2954 MarR family transcriptional regulator~PFAM: regulatory protein MarR~SMART: regulatory protein MarR~SPTR: Q1IME5 Transcriptional regulator%2C MarR family~PFAM: MarR family gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1132 Trad_1133 Trad_1133 Trad_1133 1220759 1221208 + DoxX family protein COGs: COG2259 membrane protein~InterPro IPR011637~KEGG: ddr:Deide_17380 hypothetical protein~PFAM: DoxX family protein~SPTR: C1CWZ2 Putative uncharacterized protein~PFAM: DoxX gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1133 Trad_1134 Trad_1134 Trad_1134 1221195 1222076 + Glyoxalase/bleomycin resistance protein/dioxygenase COGs: COG2514 ring-cleavage extradiol dioxygenase~InterPro IPR004360~KEGG: gau:GAU_2905 hypothetical protein~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: C1ABS0 Putative uncharacterized protein~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1134 Trad_1135 Trad_1135 Trad_1135 1222073 1223002 - Histone deacetylase COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein~InterPro IPR000286~KEGG: dge:Dgeo_1420 histone deacetylase superfamily protein~PFAM: histone deacetylase superfamily~PRIAM: Histone deacetylase~SPTR: Q1IYG9 Histone deacetylase superfamily~PFAM: Histone deacetylase domain gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1135 Trad_1136 Trad_1136 Trad_1136 1223081 1223542 - conserved hypothetical protein KEGG: dge:Dgeo_2320 hypothetical protein~SPTR: Q1IVX2 Putative uncharacterized protein gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1136 Trad_1137 Trad_1137 Trad_1137 1223811 1224512 + protein of unknown function DUF164 COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding~InterPro IPR003743~KEGG: tth:TTC1260 hypothetical protein~PFAM: protein of unknown function DUF164~SPTR: C1XS53 Zn-ribbon protein%2C possibly nucleic acid-binding~PFAM: Putative zinc ribbon domain gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1137 Trad_1138 Trad_1138 Trad_1138 1224552 1224704 + pseudogene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1138 Trad_1139 Trad_1139 Trad_1139 1224940 1225185 + pseudogene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1139 Trad_1140 Trad_1140 Trad_1140 1225204 1226169 - putative secreted solute-binding lipoprotein COGs: COG1879 ABC-type sugar transport system periplasmic component~KEGG: rxy:Rxyl_1681 putative secreted solute-binding lipoprotein~SPTR: C1XTQ0 Monosaccharide ABC transporter substrate-binding protein%2C CUT2 family~PFAM: family gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1140 Trad_1141 Trad_1141 Trad_1141 1226252 1227244 - inner-membrane translocator COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components~InterPro IPR001851~KEGG: rxy:Rxyl_1682 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: C1XTQ1 Monosaccharide ABC transporter membrane protein%2C CUT2 family~PFAM: Branched-chain amino acid transport system / permease component gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1141 Trad_1142 Trad_1142 Trad_1142 1227231 1228196 - inner-membrane translocator COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components~InterPro IPR001851~KEGG: sus:Acid_7825 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: C1XTQ2 Monosaccharide ABC transporter membrane protein%2C CUT2 family~PFAM: Branched-chain amino acid transport system / permease component gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1142 Trad_1143 Trad_1143 Trad_1143 1228193 1229686 - ABC transporter related protein COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: cai:Caci_5275 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XTQ3 Monosaccharide ABC transporter ATP-binding protein%2C CUT2 family~PFAM: ABC transporter gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1143 Trad_1144 Trad_1144 Trad_1144 1229932 1230501 + transcriptional regulator%2C TetR family InterProIPR001647:IPR012287:IPR015893:IPR011075:IPR 009057~KEGG: ttj:TTHA0973 TetR family transcriptional regulator~PFAM: regulatory protein TetR~SPTR: C1XK68 Transcriptional regulator%2C TetR family~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1144 Trad_1145 Trad_1145 Trad_1145 1230498 1231457 + phenylacetate-CoA oxygenase%2C PaaG subunit COGs: COG3396 conserved hypothetical protein~InterPro IPR011881:IPR012347:IPR009078:IPR007814~KEGG: ttj:TTHA0972 phenylacetate-CoA oxygenase subunit PaaA~PFAM: phenylacetic acid catabolic family protein~SPTR: C1XUX3 Phenylacetate-CoA oxygenase%2C PaaG subunit~TIGRFAM: phenylacetate-CoA oxygenase%2C PaaG subunit~PFAM: Phenylacetic acid catabolic protein~TIGRFAM: phenylacetate-CoA oxygenase%2C PaaG subunit gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1145 Trad_1146 Trad_1146 Trad_1146 1231462 1232001 + phenylacetic acid degradation B COGs: COG3460 Uncharacterized protein of phenylacetate metabolism~InterPro IPR009359~KEGG: dge:Dgeo_1917 phenylacetic acid degradation B~PFAM: phenylacetic acid degradation B~SPTR: C1XUX4 Uncharacterized enzyme of phenylacetate metabolism~PFAM: Phenylacetic acid degradation B~TIGRFAM: phenylacetate-CoA oxygenase%2C PaaH subunit gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1146 Trad_1147 Trad_1147 Trad_1147 1232001 1232756 + phenylacetate-CoA oxygenase%2C PaaI subunit COGs: COG3396 conserved hypothetical protein~InterPro IPR011882:IPR012347:IPR009078:IPR007814~KEGG: ddr:Deide_04580 putative phenylacetic acid degradation protein~PFAM: phenylacetic acid catabolic family protein~SPTR: C1XUX5 Phenylacetate-CoA oxygenase%2C PaaI subunit~TIGRFAM: phenylacetate-CoA oxygenase%2C PaaI subunit~PFAM: Phenylacetic acid catabolic protein~TIGRFAM: phenylacetate-CoA oxygenase%2C PaaI subunit gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1147 Trad_1148 Trad_1148 Trad_1148 1232765 1233262 + phenylacetate-CoA oxygenase%2C PaaJ subunit COGs: COG2151 metal-sulfur cluster biosynthetic protein~InterPro IPR011883:IPR002744~KEGG: dge:Dgeo_1915 phenylacetate-CoA oxygenase%2C PaaJ subunit~PFAM: protein of unknown function DUF59~SPTR: C1XUX6 Phenylacetate-CoA oxygenase%2C PaaJ subunit~TIGRFAM: phenylacetate-CoA oxygenase%2C PaaJ subunit~PFAM: Domain of unknown function DUF59~TIGRFAM: phenylacetate-CoA oxygenase%2C PaaJ subunit gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1148 Trad_1149 Trad_1149 Trad_1149 1233310 1234608 - hypothetical protein KEGG: hypothetical protein~SPTR: A8BFN0 Putative uncharacterized protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1149 Trad_1150 Trad_1150 Trad_1150 1234694 1235866 - protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: ttj:TTHA0309 hypothetical protein~PFAM: protein of unknown function UPF0118~SPTR: Q5SLI4 Putative uncharacterized protein TTHA0309~PFAM: Domain of unknown function DUF20 gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1150 Trad_1151 Trad_1151 Trad_1151 1236315 1237406 - transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: gym:GYMC10_3810 transport system permease protein~PFAM: transport system permease protein~SPTR: B1I066 Putative uncharacterized protein~PFAM: FecCD transport family gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1151 Trad_1152 Trad_1152 Trad_1152 1237406 1238440 - transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: gym:GYMC10_3811 transport system permease protein~PFAM: transport system permease protein~SPTR: C0ZJ94 Probable ABC transporter permease protein~PFAM: FecCD transport family gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1152 Trad_1153 Trad_1153 Trad_1153 1238447 1239394 - periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: rxy:Rxyl_0413 periplasmic binding protein~PFAM: periplasmic binding protein~SPTR: Q1AYZ1 Periplasmic binding protein~PFAM: Periplasmic binding protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1153 Trad_1154 Trad_1154 Trad_1154 1239420 1239776 - hypothetical protein KEGG: chl:Chy400_0341 hypothetical protein~SPTR: C1XHQ4 Putative uncharacterized protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1154 Trad_1155 Trad_1155 Trad_1155 1239781 1240569 - Protein of unknown function DUF2470 COGs: COG0748 Putative heme iron utilization protein~InterProIPR014599:IPR012349:IPR009002:IPR011576:IPR 019595~KEGG: scl:sce4194 hypothetical protein~PFAM: Protein of unknown function DUF2470%3B pyridoxamine 5'-phosphate oxidase-related FMN-binding~SPTR: A9EWW3 Specificity unclear~PFAM: Pyridoxamine 5'-phosphate oxidase%3B Protein of unknown function (DUF2470) gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1155 Trad_1156 Trad_1156 Trad_1156 1240589 1241485 - ABC transporter related protein COGs: COG4559 ABC-type hemin transport system ATPase component~InterPro IPR003593:IPR003439:IPR015863:IPR017871~KEGG: sru:SRU_2731 hemin ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q2RZ08 Hemin import ATP-binding protein hmuV~manually curated~PFAM: ABC transporter gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1156 Trad_1157 Trad_1157 Trad_1157 1241482 1242564 - transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: gvi:gll0579 hemin ABC transporter permease protein~PFAM: transport system permease protein~SPTR: Q7NN35 Hemin ABC transporter permease protein~PFAM: FecCD transport family gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1157 Trad_1158 Trad_1158 Trad_1158 1242569 1243495 - periplasmic binding protein COGs: COG4558 ABC-type hemin transport system periplasmic component~InterPro IPR002491~KEGG: dge:Dgeo_2195 periplasmic binding protein~PFAM: periplasmic binding protein~SPTR: Q1IW95 Periplasmic binding protein~PFAM: Periplasmic binding protein gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1158 Trad_1159 Trad_1159 Trad_1159 1243537 1243650 - hypothetical protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1159 Trad_1160 Trad_1160 Trad_1160 1243647 1244585 - periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: cgt:cgR_2963 hypothetical protein~PFAM: periplasmic binding protein~SPTR: A4QIC0 Putative uncharacterized protein~PFAM: Periplasmic binding protein gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1160 Trad_1161 Trad_1161 Trad_1161 1244582 1244797 - hypothetical protein KEGG: amr:AM1_A0270 hypothetical protein~SPTR: A8ZKS0 Putative uncharacterized protein gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1161 Trad_1162 Trad_1162 Trad_1162 1245089 1245697 - nitroreductase InterPro IPR000415~KEGG: rxy:Rxyl_1291 nitroreductase~PFAM: nitroreductase~SPTR: A4BLG5 Nitroreductase~PFAM: Nitroreductase family gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1162 Trad_1163 Trad_1163 Trad_1163 1245694 1246695 - periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: sro:Sros_3470 periplasmic binding protein~PFAM: periplasmic binding protein~SPTR: C1WJU6 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component~PFAM: Periplasmic binding protein gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1163 Trad_1164 Trad_1164 Trad_1164 1246776 1247816 - Sucraseferredoxin family protein COGs: COG4759 Uncharacterized protein containing thioredoxin-like domain~InterPro IPR010350:IPR012336:IPR009737~KEGG: ana:all2608 hypothetical protein~PFAM: Sucraseferredoxin family protein~SPTR: Q8YTV5 All2608 protein~PFAM: Sucrase/ferredoxin-like gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1164 Trad_1165 Trad_1165 Trad_1165 1247916 1249229 + Amidase COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~InterPro IPR000120:IPR020556~KEGG: xau:Xaut_0375 amidase~PFAM: Amidase~SPTR: A7IC90 Amidase~PFAM: Amidase gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1165 Trad_1166 Trad_1166 Trad_1166 1249426 1250214 - conserved hypothetical protein KEGG: hau:Haur_4209 hypothetical protein~SPTR: A9AXC1 Putative uncharacterized protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1166 Trad_1167 Trad_1167 Trad_1167 1250336 1251355 - hypothetical protein KEGG: pfo:Pfl01_3756 outer membrane autotransporter barrel~SPTR: C1XGB6 Putative uncharacterized protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1167 Trad_1168 Trad_1168 Trad_1168 1251352 1252044 - ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: rmr:Rmar_2536 ABC transporter related protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XGB7 ABC-type antimicrobial peptide transport system%2C ATPase component~PFAM: ABC transporter gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1168 Trad_1169 Trad_1169 Trad_1169 1252183 1252548 + S23 ribosomal protein InterPro IPR008815~KEGG: npu:Npun_BR013 S23 ribosomal protein~PFAM: S23 ribosomal protein~SPTR: B2JB57 S23 ribosomal protein~PFAM: S23 ribosomal protein gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1169 Trad_1170 Trad_1170 Trad_1170 1252600 1253829 - protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: rpf:Rpic12D_5303 protein of unknown function DUF214~PFAM: protein of unknown function DUF214~SPTR: C1XGB8 ABC-type transport system%2C involved in lipoprotein release%2C permease component~PFAM: Predicted permease gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1170 Trad_1171 Trad_1171 Trad_1171 1253831 1254580 - conserved hypothetical protein KEGG: dal:Dalk_0596 hypothetical protein~SPTR: C1XGB9 Putative uncharacterized protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1171 Trad_1172 Trad_1172 Trad_1172 1254771 1256033 - protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: dal:Dalk_0595 protein of unknown function DUF214~PFAM: protein of unknown function DUF214~SPTR: C1XGC0 ABC-type transport system%2C involved in lipoprotein release%2C permease component~PFAM: Predicted permease gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1172 Trad_1173 Trad_1173 Trad_1173 1256030 1257220 - beta-lactamase related protein COGs: COG2367 Beta-lactamase class A~InterPro IPR012338~KEGG: ttj:TTHA0756 beta-lactamase related protein~SPTR: C1XUB4 Putative uncharacterized protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1173 Trad_1174 Trad_1174 Trad_1174 1257246 1257719 - transcriptional regulator%2C MarR family COGs: COG1510 transcriptional regulator protein~InterPro IPR011991:IPR000835~KEGG: rxy:Rxyl_0088 regulatory protein%2C MarR~PFAM: regulatory protein MarR~SPTR: Q1AZW0 Regulatory protein%2C MarR~PFAM: MarR family gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1174 Trad_1175 Trad_1175 Trad_1175 1257834 1261223 - acriflavin resistance protein COGs: COG0841 Cation/multidrug efflux pump~InterPro IPR000731:IPR001036~KEGG: tth:TTC0377 acriflavin resistance protein B~PFAM: acriflavin resistance protein~SPTR: B7AA74 Acriflavin resistance protein~PFAM: AcrB/AcrD/AcrF family gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1175 Trad_1176 Trad_1176 Trad_1176 1261220 1262440 - efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: dge:Dgeo_2117 secretion protein HlyD~PFAM: secretion protein HlyD family protein~SPTR: C1XQ50 RND family efflux transporter%2C MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1176 Trad_1177 Trad_1177 Trad_1177 1262437 1263543 - outer membrane efflux protein InterPro IPR003423~KEGG: ttj:TTHA0731 hypothetical protein~PFAM: outer membrane efflux protein~SPTR: C1XKE3 Outer membrane protein~PFAM: Outer membrane efflux protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1177 Trad_1178 Trad_1178 Trad_1178 1263540 1264793 - outer membrane efflux protein COGs: COG1538 Outer membrane protein~InterPro IPR003423~KEGG: tth:TTC0380 hypothetical protein~PFAM: outer membrane efflux protein~SPTR: C1XKE4 Outer membrane protein~PFAM: Outer membrane efflux protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1178 Trad_1179 Trad_1179 Trad_1179 1265588 1266796 + pectinacetylesterase%2C putative KEGG: scl:sce0673 pectinacetylesterase%2C putative~SPTR: A9EN84 Pectinacetylesterase%2C putative~PFAM: Pectinacetylesterase gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1179 Trad_1180 Trad_1180 Trad_1180 1266929 1267531 + metal dependent phosphohydrolase COGs: COG2316 hydrolase (HD superfamily)~InterPro IPR003607:IPR006675:IPR006674~KEGG: ttj:TTHA1791 hydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Q5SHD9 Putative hydrolase (HD domain)~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1180 Trad_1181 Trad_1181 Trad_1181 1267604 1268566 - signal peptidase I InterProIPR000223:IPR011056:IPR015927:IPR019756:IPR 019757:IPR019758:IPR019759~KEGG: ttj:TTHA1368 signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region~SPTR: C1XJS0 Signal peptidase I~TIGRFAM: signal peptidase I~PFAM: Peptidase S26%3B Peptidase S24-like~TIGRFAM: signal peptidase I%2C bacterial type gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1181 Trad_1182 Trad_1182 Trad_1182 1268642 1269643 - Patatin COGs: COG1752 esterase of the alpha-beta hydrolase superfamily~InterPro IPR016035:IPR002641~KEGG: dge:Dgeo_1077 patatin~PFAM: Patatin~SPTR: C1XJS1 Predicted esterase of the alpha-beta hydrolase superfamily~PFAM: Patatin-like phospholipase gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1182 Trad_1183 Trad_1183 Trad_1183 1269826 1270556 + pseudogene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1183 Trad_1184 Trad_1184 Trad_1184 1270657 1272003 - peptidase S1 and S6 chymotrypsin/Hap COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain~InterPro IPR001478:IPR009003:IPR001940:IPR001254~KEGG: hha:Hhal_0718 peptidase S1 and S6%2C chymotrypsin/Hap~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein~SMART: PDZ/DHR/GLGF domain protein~SPTR: A1WUY8 Peptidase S1 and S6%2C chymotrypsin/Hap~PFAM: Trypsin gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1184 Trad_1185 Trad_1185 Trad_1185 1272180 1273142 - protein of unknown function DUF368 COGs: COG2035 membrane protein~InterPro IPR007163~KEGG: pdi:BDI_1390 hypothetical protein~PFAM: protein of unknown function DUF368~SPTR: B7B881 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF368) gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1185 Trad_1186 Trad_1186 Trad_1186 1273256 1274464 + methyltransferase small COGs: COG1092 SAM-dependent methyltransferase~InterPro IPR000276:IPR007848~KEGG: rxy:Rxyl_0846 SAM-dependent methyltransferase~PFAM: methyltransferase small~SPTR: Q1AXR5 SAM-dependent methyltransferase~PFAM: S-adenosylmethionine-dependent methyltransferase gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1186 Trad_1187 Trad_1187 Trad_1187 1274503 1274778 + hypothetical protein KEGG: dra:DR_2007 hypothetical protein~SPTR: B7A645 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3248) gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1187 Trad_1188 Trad_1188 Trad_1188 1274833 1275348 + conserved hypothetical protein KEGG: dge:Dgeo_0289 hypothetical protein~SPTR: Q1J1P2 Putative uncharacterized protein gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1188 Trad_1189 Trad_1189 Trad_1189 1275397 1275603 + conserved hypothetical protein KEGG: rer:RER_14700 hypothetical protein~SPTR: C0ZUD3 Conserved hypothetical membrane protein gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1189 Trad_1190 Trad_1190 Trad_1190 1275652 1277019 - tRNA modification GTPase TrmE COGs: COG0486 GTPase~InterPro IPR004520:IPR005225:IPR018948:IPR002917~KEGG: ddr:Deide_05440 putative tRNA modification GTPase~PFAM: GTP-binding protein TrmE-like%3B GTP-binding protein HSR1-related~SPTR: C1D0K8 Putative tRNA modification GTPase~TIGRFAM: tRNA modification GTPase TrmE%3B small GTP-binding protein~PFAM: GTPase of unknown function%3B GTP-binding protein TrmE N-terminus~TIGRFAM: small GTP-binding protein domain%3B tRNA modification GTPase TrmE gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1190 Trad_1191 Trad_1191 Trad_1191 1277022 1278371 - glutamate-1-semialdehyde-2%2C1-aminomutase COGs: COG0001 Glutamate-1-semialdehyde aminotransferase~InterPro IPR004639:IPR015421:IPR015424:IPR005814~KEGG: hmo:HM1_1972 glutamate-1-semialdehyde-2%2C1-aminomutase HemL~PFAM: aminotransferase class-III~SPTR: C1XV37 Glutamate-1-semialdehyde 2%2C1-aminomutase~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: Aminotransferase class-III~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1191 Trad_1192 Trad_1192 Trad_1192 1278601 1281927 - protein of unknown function DUF499 COGs: COG1483 ATPase (AAA+ superfamily)~InterPro IPR007555~KEGG: mhu:Mhun_1756 hypothetical protein~PFAM: protein of unknown function DUF499~SPTR: Q2FL46 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF499) gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1192 Trad_1193 Trad_1193 Trad_1193 1281927 1285313 - pseudogene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1193 Trad_1194 Trad_1194 Trad_1194 1283048 1283476 + transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: plu:plu4843 IS200 family transposase~PFAM: transposase IS200-family protein~SPTR: Q7M7F4 Transposase%2C IS200 Familly~PFAM: Transposase IS200 like gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1194 Trad_1195 Trad_1195 Trad_1195 1285450 1285899 - Nucleotide-binding protein%2C PIN domain protein InterPro IPR019298~KEGG: gvi:glr3019 hypothetical protein~PFAM: Nucleotide-binding protein%2C PIN domain~SPTR: Q7NCG0 Glr3019 protein~PFAM: Predicted nucleotide-binding protein%2C containing PIN domain gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1195 Trad_1196 Trad_1196 Trad_1196 1285892 1286212 - hypothetical protein KEGG: gvi:gsl2983 hypothetical protein~SPTR: Q7NCJ5 Gsl2983 protein~TIGRFAM: prevent-host-death family protein gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1196 Trad_1197 Trad_1197 Trad_1197 1286383 1286637 - conserved hypothetical protein KEGG: gvi:gsl2983 hypothetical protein~SPTR: Q7NCJ5 Gsl2983 protein gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1197 Trad_1198 Trad_1198 Trad_1198 1286711 1290193 - helicase domain protein COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family~InterProIPR014001:IPR001650:IPR014021:IPR010916:IPR 000330~KEGG: sat:SYN_00017 SNF2 family DNA/RNA helicase~PFAM: helicase domain protein%3B SNF2-related protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: A1HMN5 Helicase domain protein~PFAM: Helicase conserved C-terminal domain%3B SNF2 family N-terminal domain gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1198 Trad_1199 Trad_1199 Trad_1199 1290711 1291154 - S-adenosylmethionine decarboxylase proenzyme InterPro IPR016067~KEGG: ttj:TTHA1457 S-adenosylmethionine decarboxylase proenzyme~SPTR: C1XVW7 S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1199 Trad_1200 Trad_1200 Trad_1200 1291205 1292527 - binding-protein-dependent transport systems inner membrane component COGs: COG3833 ABC-type maltose transport systems permease component~InterPro IPR000515~KEGG: ttj:TTHA1650 maltose ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q5SHT0 Maltose ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1200 Trad_1201 Trad_1201 Trad_1201 1292524 1294134 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: ttj:TTHA1651 maltose ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B7A9F4 Fructose-bisphosphate aldolase~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1201 Trad_1202 Trad_1202 Trad_1202 1294367 1295557 - extracellular solute-binding protein family 1 COGs: COG2182 Maltose-binding periplasmic protein/domains~InterPro IPR006060:IPR006059~KEGG: ttj:TTHA1652 maltose ABC transporter%2C periplasmic maltose-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q5SHS8 Maltose ABC transporter%2C periplasmic maltose-binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1202 Trad_1203 Trad_1203 Trad_1203 1295922 1296176 - hypothetical protein KEGG: HMGR%3B 3-hydroxy-3-methylglutaryl-coenzyme A reductase %3B K00021 3-hydroxy-3-methylglutaryl-CoA reductase~SPTR: C7S800 3-hydroxy-3-methylglutaryl-coenzyme A reductase gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1203 Trad_1204 Trad_1204 Trad_1204 1296177 1297418 - amidase%2C hydantoinase/carbamoylase family COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR010158:IPR011650:IPR002933~KEGG: rxy:Rxyl_0221 amidase%2C hydantoinase/carbamoylase~PFAM: peptidase M20~PRIAM: N-carbamoyl-L-amino-acid hydrolase~SPTR: B9XKY3 Amidase%2C hydantoinase/carbamoylase family~TIGRFAM: amidase%2C hydantoinase/carbamoylase family~PFAM: Peptidase family M20/M25/M40~TIGRFAM: amidase%2C hydantoinase/carbamoylase family gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1204 Trad_1205 Trad_1205 Trad_1205 1297551 1298435 - beta-Ig-H3/fasciclin COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats~InterPro IPR000782~KEGG: sru:SRU_0261 osteoblast specific factor 2-related protein~PFAM: beta-Ig-H3/fasciclin~SMART: beta-Ig-H3/fasciclin~SPTR: C1XW13 Secreted/surface protein with fasciclin-like repeats~PFAM: Fasciclin domain gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1205 Trad_1206 Trad_1206 Trad_1206 1298875 1299198 + glutaredoxin COGs: COG0695 Glutaredoxin and related protein~InterPro IPR002109:IPR012335:IPR012336~KEGG: dge:Dgeo_1508 glutaredoxin-like protein protein%2C YruB~PFAM: glutaredoxin~SPTR: Q1IY81 Glutaredoxin-like protein protein%2C YruB~PFAM: Glutaredoxin~TIGRFAM: Glutaredoxin-like protein%2C YruB-family gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1206 Trad_1207 Trad_1207 Trad_1207 1299287 1300099 + ubiquinone/menaquinone biosynthesis methyltransferase COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR004033~KEGG: ttj:TTHA1854 ubiquinone/menaquinone biosynthesis methyltransferase~PFAM: UbiE/COQ5 methyltransferase~SPTR: Q5SH76 Ubiquinone/menaquinone biosynthesis methyltransferase~TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase~PFAM: ubiE/COQ5 methyltransferase family~TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1207 Trad_1208 Trad_1208 Trad_1208 1300096 1300680 + hypothetical protein KEGG: phe:Phep_2204 SSS sodium solute transporter superfamily~SPTR: C1XJY6 Putative uncharacterized protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1208 Trad_1209 Trad_1209 Trad_1209 1300684 1301463 + glucose-inhibited division protein A COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division~InterPro IPR002218~KEGG: tth:TTC1534 NAD(FAD)-utilizing enzyme~PFAM: glucose-inhibited division protein A~SPTR: C1XRE7 NAD/FAD-utilizing enzyme apparently involved in cell division~PFAM: Glucose inhibited division protein A gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1209 Trad_1210 Trad_1210 Trad_1210 1301593 1304289 + transcriptional regulator%2C SARP family COGs: COG3629 DNA-binding transcriptional activator of the SARP family~InterPro IPR005158~KEGG: tth:TT_P0225 hypothetical protein~PFAM: transcriptional activator domain~SPTR: Q745T2 Putative uncharacterized protein~PFAM: Bacterial transcriptional activator domain gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1210 Trad_1211 Trad_1211 Trad_1211 1304498 1305535 - hypothetical protein KEGG: geo:Geob_1639 peptidase S8 and S53 subtilisin kexin sedolisin~SPTR: A7BS21 Peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1211 Trad_1212 Trad_1212 Trad_1212 1305618 1306079 - hypothetical protein KEGG: hypothetical protein~SPTR: Q7G7C9 Os10g0393800 protein gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1212 Trad_1213 Trad_1213 Trad_1213 1306174 1306704 - hypothetical protein KEGG: hypothetical protein~SPTR: C1XSU6 Uncharacterized conserved protein (DUF2143) gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1213 Trad_1214 Trad_1214 Trad_1214 1306713 1307537 - protein of unknown function DUF191 COGs: COG2107 periplasmic solute-binding protein~InterPro IPR003794~KEGG: ttj:TTHA1568 hypothetical protein~PFAM: protein of unknown function DUF191~SPTR: B7A5A2 Putative uncharacterized protein~PFAM: Putative periplasminc binding protein (DUF178) gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1214 Trad_1215 Trad_1215 Trad_1215 1307712 1308257 + translation initiation factor IF-3 COGs: COG0290 Translation initiation factor 3 (IF-3)~InterPro IPR001288:IPR019814:IPR019815:IPR019813~KEGG: dge:Dgeo_1509 translation initiation factor IF-3~PFAM: Translation initiation factor 3-like~SPTR: Q1IY80 Translation initiation factor IF-3~TIGRFAM: translation initiation factor IF-3~PFAM: Translation initiation factor IF-3%2C C-terminal domain%3B Translation initiation factor IF-3%2C N-terminal domain~TIGRFAM: translation initiation factor IF-3 gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1215 Trad_1216 Trad_1216 Trad_1216 1308359 1308484 + ribosomal protein L35 InterPro IPR001706~KEGG: ttj:TTHA0552 50S ribosomal protein L35~PFAM: ribosomal protein L35~SPTR: P80341 50S ribosomal protein L35~PFAM: Ribosomal protein L35~TIGRFAM: ribosomal protein L35 gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1216 Trad_1217 Trad_1217 Trad_1217 1308488 1308838 + ribosomal protein L20 COGs: COG0292 Ribosomal protein L20~InterPro IPR005813~KEGG: dra:DR_2004 50S ribosomal protein L20~PFAM: ribosomal protein L20~SPTR: Q9RSW7 50S ribosomal protein L20~TIGRFAM: ribosomal protein L20~PFAM: Ribosomal protein L20~TIGRFAM: ribosomal protein L20 gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1217 Trad_1218 Trad_1218 Trad_1218 1309100 1310287 + Protein of unknown function DUF2183 COGs: COG4850 conserved hypothetical protein~InterPro IPR019236~KEGG: dge:Dgeo_0459 hypothetical protein~PFAM: Protein of unknown function DUF2183~SPTR: C4D725 Uncharacterized conserved protein~PFAM: Uncharacterized conserved protein (DUF2183) gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1218 Trad_1219 Trad_1219 Trad_1219 1310323 1311477 + Protein of unknown function DUF2183 COGs: COG4850 conserved hypothetical protein~InterPro IPR019236~KEGG: mxa:MXAN_0055 hypothetical protein~PFAM: Protein of unknown function DUF2183~SPTR: Q1DG85 Putative uncharacterized protein~PFAM: Uncharacterized conserved protein (DUF2183) gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1219 Trad_1220 Trad_1220 Trad_1220 1311524 1312558 + hydroxymethylbutenyl pyrophosphate reductase COGs: COG0761 Penicillin tolerance protein~InterPro IPR003451~KEGG: ddr:Deide_10440 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~PFAM: LytB protein~PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~SPTR: C1XIP3 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~PFAM: LytB protein~TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1220 Trad_1221 Trad_1221 Trad_1221 1312860 1313528 + hypothetical protein KEGG: hypothetical protein LOC100274820~SPTR: Q5YFP6 Putative uncharacterized protein gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1221 Trad_1222 Trad_1222 Trad_1222 1313876 1314508 - hypothetical protein KEGG: hypothetical protein~SPTR: B8CFX1 Predicted protein gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1222 Trad_1223 Trad_1223 Trad_1223 1314538 1315635 + iron-containing alcohol dehydrogenase COGs: COG0371 Glycerol dehydrogenase~InterPro IPR018211:IPR016160:IPR016205:IPR001670~KEGG: kol:Kole_0505 iron-containing alcohol dehydrogenase~PFAM: iron-containing alcohol dehydrogenase~SPTR: C5CEI1 Iron-containing alcohol dehydrogenase~PFAM: Iron-containing alcohol dehydrogenase gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1223 Trad_1224 Trad_1224 Trad_1224 1316008 1316835 - ketose-bisphosphate aldolase class-II COGs: COG0191 Fructose/tagatose bisphosphate aldolase~InterPro IPR000771:IPR013785~KEGG: pth:PTH_2838 fructose-1%2C6-bisphosphate aldolase~PFAM: ketose-bisphosphate aldolase class-II~SPTR: A5CYD1 Fructose/tagatose bisphosphate aldolase~PFAM: Fructose-bisphosphate aldolase class-II~TIGRFAM: ketose-bisphosphate aldolases gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1224 Trad_1225 Trad_1225 Trad_1225 1316942 1317979 - PfkB domain protein COGs: COG0524 Sugar kinase ribokinase family~InterPro IPR002173:IPR011611~KEGG: dfe:Dfer_5700 PfkB domain protein~PFAM: PfkB domain protein~SPTR: C1XJU2 Sugar kinase%2C ribokinase~manually curated~PFAM: pfkB family carbohydrate kinase gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1225 Trad_1226 Trad_1226 Trad_1226 1318001 1318744 - beta-lactamase domain protein COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III~KEGG: mno:Mnod_8808 beta-lactamase domain protein~SPTR: B8IXX3 Beta-lactamase domain protein~PFAM: Metallo-beta-lactamase superfamily gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1226 Trad_1227 Trad_1227 Trad_1227 1318869 1320353 - methylmalonate-semialdehyde dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterProIPR016160:IPR015590:IPR010061:IPR016162:IPR 016161~KEGG: dfe:Dfer_5699 methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: B4VJJ9 Methylmalonate-semialdehyde dehydrogenase~TIGRFAM: methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde dehydrogenase family~TIGRFAM: methylmalonic acid semialdehyde dehydrogenase gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1227 Trad_1228 Trad_1228 Trad_1228 1320515 1321348 - Myo-inositol catabolism IolB domain protein COGs: COG3718 Uncharacterized protein involved in inositol metabolism~InterPro IPR010669:IPR011051~KEGG: hne:HNE_2185 myo-inositol catabolism protein IolB~PFAM: Myo-inositol catabolism IolB domain protein~SPTR: Q0C062 Myo-inositol catabolism protein IolB~PFAM: KduI/IolB family gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1228 Trad_1229 Trad_1229 Trad_1229 1321466 1322401 - Myo-inosose-2 dehydratase COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR012307:IPR013022~KEGG: sus:Acid_1484 xylose isomerase domain-containing protein~PFAM: Xylose isomerase domain protein TIM barrel~PRIAM: Myo-inosose-2 dehydratase~SPTR: C1XJU3 Sugar phosphate isomerase/epimerase~PFAM: Xylose isomerase-like TIM barrel gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1229 Trad_1230 Trad_1230 Trad_1230 1322398 1322745 - Protein of unknown function DUF2513 InterPro IPR019650~KEGG: aat:D11S_1185 hypothetical protein~PFAM: Protein of unknown function DUF2513~SPTR: C9R432 Putative uncharacterized protein~PFAM: Hypothetical protein (DUF2513) gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1230 Trad_1231 Trad_1231 Trad_1231 1322754 1323755 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: jan:Jann_1416 myo-inositol 2-dehydrogenase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C1XJU0 Predicted dehydrogenase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1231 Trad_1232 Trad_1232 Trad_1232 1323752 1325623 - thiamine pyrophosphate protein central region COGs: COG3962 Acetolactate synthase~InterPro IPR000399:IPR012001:IPR012000:IPR011766~KEGG: ttr:Tter_1524 thiamine pyrophosphate protein central region~PFAM: thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein TPP binding domain protein%3B thiamine pyrophosphate protein domain protein TPP-binding~SPTR: C1XJU4 Acetolactate synthase~PFAM: Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1232 Trad_1233 Trad_1233 Trad_1233 1325664 1326686 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104:IPR016040~KEGG: bcl:ABC0429 myo-inositol 2-dehydrogenase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C1XJU5 Predicted dehydrogenase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1233 Trad_1234 Trad_1234 Trad_1234 1326673 1327560 - ABC transporter related protein COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: mmw:Mmwyl1_1592 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XJU6 Monosaccharide ABC transporter ATP-binding protein%2C CUT2 family~PFAM: ABC transporter gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1234 Trad_1235 Trad_1235 Trad_1235 1327565 1328596 - inner-membrane translocator COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components~InterPro IPR001851~KEGG: rxy:Rxyl_1720 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: Q1AV98 Inner-membrane translocator~PFAM: Branched-chain amino acid transport system / permease component gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1235 Trad_1236 Trad_1236 Trad_1236 1328683 1329627 - sugar ABC transporter COGs: COG1879 ABC-type sugar transport system periplasmic component~KEGG: ttr:Tter_2690 sugar ABC transporter~SPTR: D1CIK7 Sugar ABC transporter~PFAM: family gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1236 Trad_1237 Trad_1237 Trad_1237 1329800 1330600 + transcriptional regulator%2C DeoR family COGs: COG1349 Transcriptional regulators of sugar metabolism~InterPro IPR001034:IPR014036:IPR011991:IPR000485~KEGG: mta:Moth_0608 GntR family transcriptional regulator~PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR~SPTR: C1XZA2 Transcriptional regulator of sugar metabolism~PFAM: Bacterial regulatory proteins%2C deoR family%3B DeoR-like helix-turn-helix domain gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1237 Trad_1238 Trad_1238 Trad_1238 1330695 1331219 + Protein of unknown function DUF2243%2C membrane COGs: COG4329 membrane protein~InterPro IPR018719~KEGG: avn:Avin_17490 hypothetical protein~PFAM: Protein of unknown function DUF2243%2C membrane~SPTR: C0UCZ2 Predicted membrane protein%2C COG4329~PFAM: Predicted membrane protein (DUF2243) gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1238 Trad_1239 Trad_1239 Trad_1239 1331333 1331716 - Rhodanese domain protein COGs: COG0607 Rhodanese-related sulfurtransferase~InterPro IPR001763~KEGG: chl:Chy400_0246 rhodanese domain protein~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~SPTR: B9LHH6 Rhodanese domain protein~PFAM: Rhodanese-like domain gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1239 Trad_1240 Trad_1240 Trad_1240 1331713 1332387 - carbonic anhydrase COGs: COG0288 Carbonic anhydrase~InterPro IPR015892:IPR001765~KEGG: bja:bll4865 putative carbonic anhydrase~PFAM: carbonic anhydrase~SPTR: Q89KN9 Carbonic anhydrase~PFAM: Carbonic anhydrase gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1240 Trad_1241 Trad_1241 Trad_1241 1332384 1334129 - sulfate transporter COGs: COG0659 Sulfate permease and related transporter (MFS superfamily)~InterPro IPR018045:IPR002645:IPR011547:IPR001902~KEGG: gsu:GSU2312 sulfate transporter family protein~PFAM: sulphate transporter%3B Sulfate transporter/antisigma-factor antagonist STAS~SPTR: Q74AP0 Sulfate transporter family protein~TIGRFAM: sulfate transporter~PFAM: Sulfate transporter family%3B STAS domain~TIGRFAM: high affinity sulphate transporter 1 gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1241 Trad_1242 Trad_1242 Trad_1242 1334284 1335681 - Rhodanese domain protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~InterPro IPR001307:IPR001763~KEGG: rxy:Rxyl_1619 beta-lactamase-like protein~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~SPTR: Q1AVJ8 Beta-lactamase-like protein~PFAM: Metallo-beta-lactamase superfamily%3B Rhodanese-like domain gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1242 Trad_1243 Trad_1243 Trad_1243 1335957 1337144 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG0446 NAD(FAD)-dependent dehydrogenase~InterPro IPR013027:IPR003042~KEGG: cag:Cagg_0045 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: B8GC24 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1243 Trad_1244 Trad_1244 Trad_1244 1337197 1337877 - protein of unknown function DUF1641 InterPro IPR012440~KEGG: sru:SRU_0318 hypothetical protein~PFAM: protein of unknown function DUF1641~SPTR: Q2S5R7 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF1641) gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1244 Trad_1245 Trad_1245 Trad_1245 1338071 1338964 - transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847:IPR005119:IPR011991~KEGG: dge:Dgeo_2711 LysR family transcriptional regulator~PFAM: LysR substrate-binding%3B regulatory protein LysR~SPTR: C1XGH5 Transcriptional regulator%2C COG0583~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1245 Trad_1246 Trad_1246 Trad_1246 1339071 1339469 - hypothetical protein KEGG: mav:MAV_2588 transcriptional regulator%2C TetR family protein~SPTR: A0QFU1 Transcriptional regulator%2C TetR family protein gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1246 Trad_1247 Trad_1247 Trad_1247 1339617 1340399 - ABC transporter related protein COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: mlo:mll3710 ABC-transport system ATP binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q98FM1 ABC-transport system ATP binding protein~PFAM: ABC transporter gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1247 Trad_1248 Trad_1248 Trad_1248 1340396 1341643 - inner-membrane translocator COGs: COG4214 ABC-type xylose transport system permease component~InterPro IPR001851~KEGG: mlo:mll3711 xylose transport permease protein XylH~PFAM: inner-membrane translocator~SPTR: Q1YHH7 Permease protein%2C ABC-type xylose transporter~PFAM: Branched-chain amino acid transport system / permease component gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1248 Trad_1249 Trad_1249 Trad_1249 1341667 1342686 - D-xylose ABC transporter%2C periplasmic substrate-binding protein COGs: COG4213 ABC-type xylose transport system periplasmic component~InterPro IPR013456~KEGG: rsq:Rsph17025_2619 D-xylose ABC transporter%2C periplasmic substrate-binding protein~SPTR: A4WVU2 D-xylose ABC transporter%2C periplasmic substrate-binding protein~TIGRFAM: D-xylose ABC transporter%2C periplasmic substrate-binding protein~PFAM: family~TIGRFAM: D-xylose ABC transporter%2C substrate-binding protein gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1249 Trad_1250 Trad_1250 Trad_1250 1342871 1343827 - sulfotransferase InterPro IPR000863~KEGG: cyc:PCC7424_4200 sulfotransferase~PFAM: sulfotransferase~SPTR: B7KLJ8 Sulfotransferase~PFAM: Sulfotransferase domain gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1250 Trad_1251 Trad_1251 Trad_1251 1344059 1345408 - Kelch repeat-containing protein COGs: COG3055 conserved hypothetical protein~InterPro IPR006652:IPR015915:IPR011043~KEGG: dge:Dgeo_2665 glycosy hydrolase family protein~PFAM: Kelch repeat-containing protein~SMART: Kelch repeat-containing protein~SPTR: Q1J336 Glycosyl hydrolase family 98%2C putative carbohydrate binding module~PFAM: Kelch motif gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1251 Trad_1252 Trad_1252 Trad_1252 1345493 1346722 - protein of unknown function DUF1080 InterPro IPR000601:IPR010496~KEGG: sgr:SGR_6942 putative large multi-functional protein~PFAM: protein of unknown function DUF1080%3B PKD domain containing protein~SMART: PKD domain containing protein~SPTR: B5HE50 Putative uncharacterized protein~PFAM: Domain of Unknown Function (DUF1080)%3B PKD domain gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1252 Trad_1253 Trad_1253 Trad_1253 1346762 1347268 - hypothetical protein KEGG: scl:sce1966 hypothetical protein~SPTR: A9FQ64 Putative uncharacterized protein gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1253 Trad_1254 Trad_1254 Trad_1254 1347339 1349084 - protein of unknown function DUF1080 InterPro IPR010496~KEGG: dge:Dgeo_2670 glycosy hydrolase family protein~PFAM: protein of unknown function DUF1080~SPTR: Q1J331 Glycosyl hydrolase family 98%2C putative carbohydrate binding module~PFAM: Domain of Unknown Function (DUF1080) gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1254 Trad_1255 Trad_1255 Trad_1255 1349123 1349329 - hypothetical protein KEGG: rca:Rcas_2729 hypothetical protein~SPTR: A7NMM9 Putative uncharacterized protein gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1255 Trad_1256 Trad_1256 Trad_1256 1349897 1352974 + Tetratricopeptide TPR_2 repeat protein COGs: COG2909 ATP-dependent transcriptional regulator protein~InterPro IPR019734:IPR013026:IPR013105:IPR011990~KEGG: sth:STH810 transcriptional regulator~PFAM: Tetratricopeptide TPR_2 repeat protein~SPTR: C0GFP5 Transcriptional activator domain protein~PFAM: Bacterial transcriptional activator domain gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1256 Trad_1257 Trad_1257 Trad_1257 1353136 1353462 - conserved hypothetical protein KEGG: pmu:PM1205 hypothetical protein~SPTR: Q9CLL9 Uncharacterized protein PM1205 gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1257 Trad_1258 Trad_1258 Trad_1258 1353541 1354479 - succinyl-CoA synthetase%2C alpha subunit COGs: COG0074 Succinyl-CoA synthetase alpha subunit~InterProIPR017440:IPR005810:IPR003781:IPR005811:IPR 016040:IPR016102~KEGG: aac:Aaci_1376 succinyl-CoA synthetase%2C alpha subunit~PFAM: ATP-citrate lyase/succinyl-CoA ligase%3B CoA-binding domain protein~SPTR: C8WWD2 Succinyl-CoA synthetase%2C alpha subunit~TIGRFAM: succinyl-CoA synthetase%2C alpha subunit~PFAM: CoA binding domain%3B CoA-ligase~TIGRFAM: succinyl-CoA synthetase%2C alpha subunit gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1258 Trad_1259 Trad_1259 Trad_1259 1354476 1355699 - succinyl-CoA synthetase%2C beta subunit COGs: COG0045 Succinyl-CoA synthetase beta subunit~InterProIPR017866:IPR011761:IPR013650:IPR005811:IPR 005809:IPR013816:IPR016102~KEGG: hoh:Hoch_5147 succinyl-CoA synthetase%2C beta subunit~PFAM: ATP-grasp domain protein%3B ATP-citrate lyase/succinyl-CoA ligase~PRIAM: Succinate--CoA ligase (ADP-forming)~SPTR: A6GJK9 Succinyl-CoA synthetase~TIGRFAM: succinyl-CoA synthetase%2C beta subunit~PFAM: CoA-ligase%3B ATP-grasp domain~TIGRFAM: succinyl-CoA synthetase%2C beta subunit gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1259 Trad_1260 Trad_1260 Trad_1260 1355927 1357495 - sulfatase COGs: COG3119 Arylsulfatase A~InterPro IPR000917:IPR012251:IPR017849:IPR017850~KEGG: rxy:Rxyl_3110 sulfatase~PFAM: sulfatase~SPTR: A8TM14 Sulfatase~PFAM: Sulfatase gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1260 Trad_1261 Trad_1261 Trad_1261 1357631 1358113 + protein of unknown function DUF456 COGs: COG2839 conserved hypothetical protein~InterPro IPR007403~KEGG: sml:Smlt3217 putative transmembrane protein~PFAM: protein of unknown function DUF456~SPTR: B2FLF1 Putative transmembrane protein~PFAM: Protein of unknown function (DUF456) gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1261 Trad_1262 Trad_1262 Trad_1262 1358420 1359340 + prolipoprotein diacylglyceryl transferase COGs: COG0682 Prolipoprotein diacylglyceryltransferase~InterPro IPR001640~KEGG: tth:TTC0016 prolipoprotein diacylglyceryl transferase~PFAM: prolipoprotein diacylglyceryl transferase~SPTR: C1XXT4 Prolipoprotein diacylglyceryltransferase~TIGRFAM: prolipoprotein diacylglyceryl transferase~PFAM: Prolipoprotein diacylglyceryl transferase~TIGRFAM: prolipoprotein diacylglyceryl transferase gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1262 Trad_1263 Trad_1263 Trad_1263 1359342 1360112 + Glucosamine-1-phosphate N-acetyltransferase COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)~InterPro IPR001228~KEGG: plt:Plut_1770 UDP-N-acetylglucosamine diphosphorylase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~PRIAM: Glucosamine-1-phosphate N-acetyltransferase~SPTR: Q3B207 UDP-N-acetylglucosamine pyrophosphorylase~PFAM: Nucleotidyl transferase~TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1263 Trad_1264 Trad_1264 Trad_1264 1360086 1361573 - sulfatase COGs: COG3119 Arylsulfatase A~InterProIPR000917:IPR017909:IPR006311:IPR017849:IPR 017850~KEGG: sus:Acid_4006 sulfatase~PFAM: sulfatase~SPTR: Q01ZE2 Sulfatase~PFAM: Sulfatase~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1264 Trad_1265 Trad_1265 Trad_1265 1361753 1362904 + carbamoyl-phosphate synthase%2C small subunit COGs: COG0505 Carbamoylphosphate synthase small subunit~InterProIPR017926:IPR002474:IPR000991:IPR006274:IPR 001317:IPR011702:IPR006220~KEGG: dge:Dgeo_2060 carbamoyl phosphate synthase small subunit~PFAM: Carbamoyl-phosphate synthase small chain%3B glutamine amidotransferase class-I~SPTR: Q1IWN0 Carbamoyl-phosphate synthase small chain~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit~PFAM: Carbamoyl-phosphate synthase small chain%2C CPSase domain%3B Glutamine amidotransferase class-I~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1265 Trad_1266 Trad_1266 Trad_1266 1363332 1364534 + protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: dge:Dgeo_1713 hypothetical protein~PFAM: protein of unknown function UPF0118~SPTR: C1XHJ4 Predicted permease~PFAM: Domain of unknown function DUF20 gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1266 Trad_1267 Trad_1267 Trad_1267 1364479 1365450 - conserved hypothetical protein InterPro IPR009003~KEGG: kra:Krad_0257 hypothetical protein~SPTR: C0U8K7 Putative uncharacterized protein gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1267 Trad_1268 Trad_1268 Trad_1268 1365447 1365695 - hypothetical protein KEGG: hypothetical protein~SPTR: C5DVK1 ZYRO0D07348p gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1268 Trad_1269 Trad_1269 Trad_1269 1365956 1367086 + protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: ttj:TTHA0309 hypothetical protein~PFAM: protein of unknown function UPF0118~SPTR: B7A8H0 Putative uncharacterized protein~PFAM: Domain of unknown function DUF20~TIGRFAM: ATP synthase subunit 6 (eukaryotes)%2Calso subunit A (prokaryotes) gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1269 Trad_1270 Trad_1270 Trad_1270 1367038 1367736 - sugar transferase COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR003362~KEGG: afw:Anae109_2622 undecaprenyl-phosphate galactose phosphotransferase~PFAM: sugar transferase~SPTR: A7HDM7 Undecaprenyl-phosphate galactose phosphotransferase~PFAM: Bacterial sugar transferase gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1270 Trad_1271 Trad_1271 Trad_1271 1367927 1368349 - conserved hypothetical protein KEGG: rrs:RoseRS_4136 hypothetical protein~SPTR: A6G6Y0 Putative uncharacterized protein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1271 Trad_1272 Trad_1272 Trad_1272 1368499 1369683 - peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209:IPR010259:IPR009020~KEGG: mca:MCA0875 serine protease~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B proteinase inhibitor I9 subtilisin propeptide~SPTR: C1XT80 Subtilisin-like serine protease~PFAM: Peptidase inhibitor I9%3B Subtilase family gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1272 Trad_1273 Trad_1273 Trad_1273 1369958 1370395 - D-tyrosyl-tRNA(Tyr) deacylase COGs: COG1490 D-Tyr-tRNAtyr deacylase~InterPro IPR003732~KEGG: rmr:Rmar_2367 D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase~SPTR: A3VHR6 D-tyrosyl-tRNA(Tyr) deacylase~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-Tyr-tRNA(Tyr) deacylase~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1273 Trad_1274 Trad_1274 Trad_1274 1370395 1370679 - Domain of unknown function DUF1844 InterPro IPR014995~KEGG: ddr:Deide_09750 hypothetical protein~PFAM: Domain of unknown function DUF1844~SPTR: C1CUI8 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF1844) gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1274 Trad_1275 Trad_1275 Trad_1275 1370679 1371338 - phage SPO1 DNA polymerase-related protein COGs: COG1573 Uracil-DNA glycosylase~InterPro IPR005122:IPR005273~KEGG: tth:TTC0366 uracil-DNA glycosylase~PFAM: Uracil-DNA glycosylase superfamily~SPTR: C1XJ44 Uracil-DNA glycosylase%2C family 4~TIGRFAM: phage SPO1 DNA polymerase-related protein~PFAM: Uracil DNA glycosylase superfamily~TIGRFAM: uracil-DNA glycosylase%2C family 4 gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1275 Trad_1276 Trad_1276 Trad_1276 1371474 1371857 - conserved hypothetical protein KEGG: ttj:TTHA0719 hypothetical protein~SPTR: B7A659 Putative uncharacterized protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1276 Trad_1277 Trad_1277 Trad_1277 1372253 1372501 - hypothetical protein KEGG: eum:ECUMN_4471 hypothetical protein~SPTR: B7NFP0 Putative uncharacterized protein~PFAM: Probable metal-binding protein (DUF2387) gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1277 Trad_1278 Trad_1278 Trad_1278 1372588 1373508 - fructose-1%2C6-bisphosphate aldolase%2C class II COGs: COG0191 Fructose/tagatose bisphosphate aldolase~InterPro IPR000771:IPR011289:IPR013785~KEGG: ttj:TTHA1773 fructose-1%2C6-bisphosphate aldolase~PFAM: ketose-bisphosphate aldolase class-II~PRIAM: Fructose-bisphosphate aldolase~SPTR: C1XSQ7 Fructose-bisphosphate aldolase~TIGRFAM: fructose-1%2C6-bisphosphate aldolase%2C class II%3B ketose-bisphosphate aldolase~PFAM: Fructose-bisphosphate aldolase class-II~TIGRFAM: ketose-bisphosphate aldolases%3B fructose-1%2C6-bisphosphate aldolase%2C class II%2C various bacterial and amitochondriate protist gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1278 Trad_1279 Trad_1279 Trad_1279 1373620 1373904 + hypothetical protein KEGG: sfu:Sfum_1935 proton-translocating NADH-quinone oxidoreductase%2C chain N~SPTR: A0LJL8 Proton-translocating NADH-quinone oxidoreductase%2C chain N gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1279 Trad_1280 Trad_1280 Trad_1280 1373861 1374541 - futalosine nucleosidase COGs: COG0775 Nucleoside phosphorylase~InterPro IPR000845:IPR019963~KEGG: gsu:GSU0453 MTA/SAH nucleosidase~PFAM: purine or other phosphorylase family 1~SPTR: C6MT37 Purine or other phosphorylase family 1~TIGRFAM: futalosine nucleosidase~PFAM: Phosphorylase superfamily~TIGRFAM: futalosine nucleosidase gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1280 Trad_1281 Trad_1281 Trad_1281 1374526 1375047 - hypothetical protein KEGG: bcj:BCAL1661 putative ribokinase~SPTR: C1XUQ5 Putative uncharacterized protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1281 Trad_1282 Trad_1282 Trad_1282 1375241 1376185 - signal recognition particle-docking protein FtsY COGs: COG0552 Signal recognition particle GTPase~InterPro IPR000897:IPR003593:IPR004390:IPR013822~KEGG: dge:Dgeo_0730 signal recognition particle-docking protein FtsY~PFAM: GTP-binding signal recognition particle SRP54 G- domain~SMART: AAA ATPase~SPTR: C1XLG9 Signal recognition particle-docking protein FtsY~TIGRFAM: signal recognition particle-docking protein FtsY~PFAM: SRP54-type protein%2C GTPase domain%3B SRP54-type protein%2C helical bundle domain~TIGRFAM: signal recognition particle-docking protein FtsY gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1282 Trad_1283 Trad_1283 Trad_1283 1376185 1377693 - glutamyl-tRNA synthetase COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase~InterProIPR001412:IPR020058:IPR004527:IPR014729:IPR 020061:IPR020752:IPR020751:IPR020060:IPR008925~KEGG: ttj:TTHA0438 glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain~SPTR: C1XH94 Glutamyl-tRNA synthetase~TIGRFAM: glutamyl-tRNA synthetase~PFAM: tRNA synthetases class I (E and Q)%2C catalytic domain~TIGRFAM: glutamyl-tRNA synthetase%2C bacterial family gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1283 Trad_1284 Trad_1284 Trad_1284 1377829 1378586 - pseudogene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1284 Trad_1285 Trad_1285 Trad_1285 1378646 1379497 - undecaprenol kinase COGs: COG1968 Uncharacterized bacitracin resistance protein~InterPro IPR003824~KEGG: svi:Svir_20010 undecaprenyl-diphosphatase~PFAM: Bacitracin resistance protein BacA~SPTR: C7MV67 Undecaprenyl-diphosphatase~TIGRFAM: undecaprenol kinase~PFAM: Bacitracin resistance protein BacA~TIGRFAM: undecaprenyl-diphosphatase UppP gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1285 Trad_1286 Trad_1286 Trad_1286 1379723 1380109 - ribosomal protein S9 COGs: COG0103 Ribosomal protein S9~InterPro IPR020574:IPR000754:IPR014721:IPR020568~KEGG: dge:Dgeo_1735 30S ribosomal protein S9~PFAM: ribosomal protein S9~SPTR: Q1IXK4 30S ribosomal protein S9~PFAM: Ribosomal protein S9/S16 gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1286 Trad_1287 Trad_1287 Trad_1287 1380109 1380531 - ribosomal protein L13 COGs: COG0102 Ribosomal protein L13~InterPro IPR005822:IPR005823~KEGG: ttj:TTHA1465 50S ribosomal protein L13~PFAM: ribosomal protein L13~SPTR: B7A5I8 50S ribosomal protein L13~TIGRFAM: ribosomal protein L13~PFAM: Ribosomal protein L13~TIGRFAM: ribosomal protein L13%2C bacterial type gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1287 Trad_1288 Trad_1288 Trad_1288 1381280 1381939 + Phosphoglycerate mutase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR013078~KEGG: acl:ACL_0243 phosphoglycerate mutase family protein~PFAM: Phosphoglycerate mutase~SPTR: B9Y7Q1 Putative uncharacterized protein~PFAM: Phosphoglycerate mutase family gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1288 Trad_1289 Trad_1289 Trad_1289 1382000 1382575 + GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR000182:IPR016181~KEGG: mxa:MXAN_1062 acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Q1DDF0 Acetyltransferase%2C GNAT family gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1289 Trad_1290 Trad_1290 Trad_1290 1382605 1383300 - transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterProIPR018488:IPR000595:IPR012318:IPR001808:IPR 014710:IPR011991:IPR018490~KEGG: ttj:TTHA1437 Crp family transcriptional regulator~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: cyclic nucleotide-binding%3B regulatory protein Crp~SPTR: C1XQM8 cAMP-binding protein~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1290 Trad_1291 Trad_1291 Trad_1291 1383440 1384150 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: dge:Dgeo_0967 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q1IZR7 ABC-type transport system%2C ATPase component~PFAM: ABC transporter gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1291 Trad_1292 Trad_1292 Trad_1292 1384313 1385926 + extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: dge:Dgeo_1189 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: B4WMZ8 Bacterial extracellular solute-binding protein%2C family 5~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1292 Trad_1293 Trad_1293 Trad_1293 1385996 1387051 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_1190 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1IZ47 ABC-type dipeptide transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1293 Trad_1294 Trad_1294 Trad_1294 1387094 1388074 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_1191 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1IZ46 ABC-type dipeptide transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1294 Trad_1295 Trad_1295 Trad_1295 1388092 1389462 + FAD linked oxidase domain protein COGs: COG0277 FAD/FMN-containing dehydrogenase~InterProIPR016166:IPR006094:IPR004113:IPR016167:IPR 016168:IPR016164~KEGG: bbe:BBR47_56460 putative FAD linked oxidase~PFAM: FAD linked oxidase domain protein~SPTR: C0Z8J6 Putative FAD linked oxidase~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain~TIGRFAM: glycolate oxidase%2C subunit GlcD gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1295 Trad_1296 Trad_1296 Trad_1296 1389661 1390794 - N-acetylglucosamine-6-phosphate deacetylase COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase~InterPro IPR006680:IPR003764~KEGG: dra:DR_A0066 N-acetylglucosamine-6-phosphate deacetylase~PFAM: amidohydrolase~PRIAM: N-acetylglucosamine-6-phosphate deacetylase~SPTR: Q9RZ88 N-acetylglucosamine-6-phosphate deacetylase~TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase~PFAM: Amidohydrolase family~TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1296 Trad_1297 Trad_1297 Trad_1297 1390873 1391787 + Auxin Efflux Carrier COGs: COG0679 permease~InterPro IPR004776~KEGG: dge:Dgeo_1082 auxin efflux carrier~PFAM: Auxin Efflux Carrier~SPTR: Q1IZF3 Auxin Efflux Carrier~PFAM: Membrane transport protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1297 Trad_1298 Trad_1298 Trad_1298 1391784 1392887 - hypothetical protein KEGG: rbi:RB2501_01730 hypothetical protein~SPTR: A3HW62 Putative uncharacterized protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1298 Trad_1299 Trad_1299 Trad_1299 1392944 1395181 - ABC transporter related protein COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains~InterPro IPR017871:IPR003439:IPR003593~KEGG: dge:Dgeo_0506 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q1J126 ATPase component of ABC transporter%2C containing duplicated ATPase domains~PFAM: ABC transporter gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1299 Trad_1300 Trad_1300 Trad_1300 1395349 1395843 - protein of unknown function DUF427 COGs: COG2343 conserved hypothetical protein~InterPro IPR007361~KEGG: rrs:RoseRS_1298 hypothetical protein~PFAM: protein of unknown function DUF427~SPTR: A5USU9 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF427) gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1300 Trad_1301 Trad_1301 Trad_1301 1395897 1397366 + DNA photolyase FAD-binding protein COGs: COG0415 Deoxyribodipyrimidine photolyase~InterPro IPR006050:IPR005101:IPR014729~KEGG: rxy:Rxyl_0663 deoxyribodipyrimidine photo-lyase type II~PFAM: DNA photolyase FAD-binding%3B DNA photolyase domain protein~SPTR: Q1AY95 Deoxyribodipyrimidine photo-lyase type II~PFAM: FAD binding domain of DNA photolyase%3B DNA photolyase~TIGRFAM: photolyase PhrII gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1301 Trad_1302 Trad_1302 Trad_1302 1397415 1397639 + CopG domain protein DNA-binding domain protein InterPro IPR002145~KEGG: ana:alr1860 hypothetical protein~PFAM: CopG domain protein DNA-binding domain protein~SPTR: Q8YVW3 Alr1860 protein~PFAM: Ribbon-helix-helix protein%2C copG family gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1302 Trad_1303 Trad_1303 Trad_1303 1397684 1398004 + hypothetical protein KEGG: hypothetical protein~SPTR: C4CYP6 Beta-galactosidase/beta-glucuronidase gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1303 Trad_1304 Trad_1304 Trad_1304 1398052 1398906 + conserved hypothetical protein KEGG: scl:sce5771 hypothetical protein~SPTR: A9G811 Putative uncharacterized protein~PFAM: Uncharacterized protein conserved in bacteria (DUF2236) gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1304 Trad_1305 Trad_1305 Trad_1305 1398952 1399296 + hypothetical protein KEGG: bam:Bamb_2373 benzoate transporter~SPTR: B5SM96 Probable dna translocation competence protein coma (N-terminal) gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1305 Trad_1306 Trad_1306 Trad_1306 1399318 1399860 + conserved hypothetical protein COGs: COG1514 2'-5' RNA ligase~InterPro IPR009097~KEGG: rmr:Rmar_2526 hypothetical protein~SPTR: D0MFE6 Putative uncharacterized protein~PFAM: 2'%2C5' RNA ligase family gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1306 Trad_1307 Trad_1307 Trad_1307 1399911 1400723 - alpha/beta hydrolase fold protein COGs: COG1647 Esterase/lipase~InterPro IPR000073~KEGG: sti:Sthe_2075 alpha/beta hydrolase fold protein~PFAM: alpha/beta hydrolase fold~SPTR: D1C5V2 Alpha/beta hydrolase fold protein~PFAM: Thioesterase domain gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1307 Trad_1308 Trad_1308 Trad_1308 1400823 1402610 + GTP-binding protein LepA COGs: COG0481 Membrane GTPase LepA~InterProIPR000795:IPR004161:IPR000640:IPR013842:IPR 005225:IPR006297:IPR009022~KEGG: dge:Dgeo_1624 GTP-binding protein LepA~PFAM: GTP-binding protein LepA domain protein%3B protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain protein~SPTR: Q1IXW5 GTP-binding protein lepA~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B GTP-binding protein LepA C-terminus~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein domain gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1308 Trad_1309 Trad_1309 Trad_1309 1402635 1403474 - conserved hypothetical protein InterPro IPR001120:IPR012902~KEGG: dra:DR_1234 hypothetical protein~SPTR: Q9RUZ6 Putative uncharacterized protein~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1309 Trad_1310 Trad_1310 Trad_1310 1403477 1403962 - putative pilin%2C type IV InterPro IPR001120:IPR012902~KEGG: dge:Dgeo_2110 putative pilin%2C type IV~SPTR: C1XPS3 Prepilin-type N-terminal cleavage/methylation domain-containing protein~PFAM: Prokaryotic N-terminal methylation motif~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1310 Trad_1311 Trad_1311 Trad_1311 1403959 1404399 - putative pilus assembly protein InterPro IPR012902~KEGG: ddr:Deide_19452 putative pilus assembly protein~SPTR: C1XPS4 Prepilin-type N-terminal cleavage/methylation domain-containing protein~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1311 Trad_1312 Trad_1312 Trad_1312 1404396 1406504 - hypothetical protein KEGG: ddr:Deide_19451 hypothetical protein~SPTR: C1CXY6 Putative uncharacterized protein gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1312 Trad_1313 Trad_1313 Trad_1313 1407151 1407600 + chromosome segregation and condensation protein%2C ScpB COGs: COG1386 transcriptional regulator protein containing the HTH domain~InterPro IPR005234~KEGG: dra:DR_1861 hypothetical protein~PFAM: chromosome segregation and condensation protein ScpB~SPTR: Q9RTA4 Putative uncharacterized protein~PFAM: Putative transcriptional regulators (Ypuh-like)~TIGRFAM: segregation and condensation protein B gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1313 Trad_1314 Trad_1314 Trad_1314 1407660 1408619 - aminoglycoside phosphotransferase InterPro IPR002575:IPR011009~KEGG: tcu:Tcur_2624 aminoglycoside phosphotransferase~PFAM: aminoglycoside phosphotransferase~SPTR: D1A509 Aminoglycoside phosphotransferase~PFAM: Phosphotransferase enzyme family gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1314 Trad_1315 Trad_1315 Trad_1315 1409113 1409676 + transcriptional regulator%2C XRE family InterProIPR000595:IPR001387:IPR013096:IPR014710:IPR 011051~KEGG: sit:TM1040_2158 XRE family transcriptional regulator~PFAM: helix-turn-helix domain protein%3B Cupin 2 conserved barrel domain protein~SMART: helix-turn-helix domain protein~SPTR: Q1GEM6 Transcriptional regulator%2C XRE family with cupin sensor~PFAM: Cupin domain%3B Helix-turn-helix gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1315 Trad_1316 Trad_1316 Trad_1316 1409867 1410790 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: sth:STH2313 oligopeptide ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q67LZ8 Oligopeptide ABC transporter permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1316 Trad_1317 Trad_1317 Trad_1317 1410783 1411766 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR017871:IPR000515~KEGG: tth:TTC0972 dipeptide transport system permease protein DppB~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q72J09 Dipeptide transport system permease protein dppB~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1317 Trad_1318 Trad_1318 Trad_1318 1411830 1413335 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: aoe:Clos_1347 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: A8MH05 Extracellular solute-binding protein family 5~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1318 Trad_1319 Trad_1319 Trad_1319 1413366 1414553 - peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR000994:IPR001714~KEGG: sti:Sthe_0482 peptidase M24~PFAM: peptidase M24~SPTR: D1C7T7 Peptidase M24~PFAM: Metallopeptidase family M24 gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1319 Trad_1320 Trad_1320 Trad_1320 1414753 1415367 + flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR002563:IPR012349:IPR009002~KEGG: ddr:Deide_1p00510 putative flavoredoxin~PFAM: flavin reductase domain protein FMN-binding~SPTR: C1D215 Putative flavoredoxin~PFAM: Flavin reductase like domain gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1320 Trad_1321 Trad_1321 Trad_1321 1415364 1416626 + Xaa-Pro aminopeptidase family enzyme InterPro IPR000994~KEGG: chl:Chy400_0110 Xaa-Pro aminopeptidase family enzyme~SPTR: B9LGG4 Xaa-Pro aminopeptidase family enzyme~PFAM: Metallopeptidase family M24 gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1321 Trad_1322 Trad_1322 Trad_1322 1416611 1418095 + Endoribonuclease L-PSP COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395:IPR006175:IPR013813~KEGG: dsh:Dshi_1985 aldo/keto reductase family protein~PFAM: Endoribonuclease L-PSP%3B aldo/keto reductase~SPTR: A4A767 Aldo/keto reductase/Endoribonuclease L-PSP~PFAM: Aldo/keto reductase family%3B Endoribonuclease L-PSP gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1322 Trad_1323 Trad_1323 Trad_1323 1418193 1418954 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439:IPR003593~KEGG: gvi:glr3421 ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q7NFV3 Glr3421 protein~PFAM: ABC transporter gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1323 Trad_1324 Trad_1324 Trad_1324 1418951 1420465 + conserved hypothetical protein InterPro IPR000276~KEGG: gvi:glr3422 hypothetical protein~SPTR: Q7NFV2 Glr3422 protein gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1324 Trad_1325 Trad_1325 Trad_1325 1420544 1421182 + Methyltransferase type 12 InterPro IPR013217~KEGG: xce:Xcel_2365 hypothetical protein~PFAM: Methyltransferase type 12~SPTR: D1BVR2 Putative uncharacterized protein~PFAM: Methyltransferase small domain gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1325 Trad_1326 Trad_1326 Trad_1326 1421236 1421673 - 3-dehydroquinate dehydratase%2C type II COGs: COG0757 3-dehydroquinate dehydratase II~InterPro IPR018509:IPR001874~KEGG: dge:Dgeo_1733 3-dehydroquinate dehydratase~PFAM: dehydroquinase class II~PRIAM: 3-dehydroquinate dehydratase~SPTR: Q1IXK6 3-dehydroquinate dehydratase%2C type II~TIGRFAM: 3-dehydroquinate dehydratase%2C type II~PFAM: Dehydroquinase class II~TIGRFAM: 3-dehydroquinate dehydratase%2C type II gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1326 Trad_1327 Trad_1327 Trad_1327 1421670 1422797 - 3-dehydroquinate synthase COGs: COG0337 3-dehydroquinate synthetase~InterPro IPR016303:IPR002658:IPR016037~KEGG: ddr:Deide_17670 putative 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase~PRIAM: 3-dehydroquinate synthase~SPTR: C1CX24 Putative 3-dehydroquinate synthase~TIGRFAM: 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase~TIGRFAM: 3-dehydroquinate synthase gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1327 Trad_1328 Trad_1328 Trad_1328 1422794 1423372 - Shikimate kinase COGs: COG0703 Shikimate kinase~InterPro IPR000623~KEGG: dra:DR_0776 shikimate kinase~PFAM: shikimate kinase~PRIAM: Shikimate kinase~SPTR: Q9RW93 Shikimate kinase~PFAM: Shikimate kinase gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1328 Trad_1329 Trad_1329 Trad_1329 1423432 1424607 - chorismate synthase COGs: COG0082 Chorismate synthase~InterPro IPR020541:IPR000453~KEGG: dge:Dgeo_1730 chorismate synthase~PFAM: chorismate synthase~PRIAM: Chorismate synthase~SPTR: Q1IXK9 Chorismate synthase~TIGRFAM: chorismate synthase~PFAM: Chorismate synthase~TIGRFAM: chorismate synthase gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1329 Trad_1330 Trad_1330 Trad_1330 1424688 1426370 - type II and III secretion system protein COGs: COG1450 Type II secretory pathway component PulD~InterPro IPR004845:IPR005644:IPR004846:IPR001775~KEGG: tth:TTC1017 competence protein PilQ~PFAM: type II and III secretion system protein%3B NolW domain protein~SPTR: C1XGT1 Type II secretory pathway%2C component PulD~PFAM: Bacterial type II/III secretion system short domain%3B Bacterial type II and III secretion system protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1330 Trad_1331 Trad_1331 Trad_1331 1426388 1427380 - hypothetical protein KEGG: bja:blr0521 hypothetical protein~SPTR: Q89X06 Blr0521 protein gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1331 Trad_1332 Trad_1332 Trad_1332 1427377 1428090 - General secretion pathway protein M InterPro IPR018247:IPR019677~KEGG: dge:Dgeo_1727 type IV pilus assembly protein PilO~PFAM: General secretion pathway protein M~SPTR: C1XGT3 Putative uncharacterized protein~PFAM: Pilus assembly protein%2C PilO~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1332 Trad_1333 Trad_1333 Trad_1333 1428087 1428767 - Fimbrial assembly family protein InterPro IPR007813~KEGG: tth:TTC1014 competence protein PilN~PFAM: Fimbrial assembly family protein~SPTR: Q72IW7 Competence protein pilN~PFAM: Fimbrial assembly protein (PilN) gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1333 Trad_1334 Trad_1334 Trad_1334 1428764 1429963 - type IV pilus assembly protein PilM COGs: COG4972 Tfp pilus assembly protein ATPase PilM~InterPro IPR005883~KEGG: dge:Dgeo_1725 type IV pilus assembly protein PilM~SPTR: Q1IXL4 Type IV pilus assembly protein PilM~TIGRFAM: type IV pilus assembly protein PilM~PFAM: Competence protein A%3B Cell division protein FtsA~TIGRFAM: cell division protein FtsA%3B type IV pilus assembly protein PilM gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1334 Trad_1335 Trad_1335 Trad_1335 1430358 1431767 + hypothetical protein KEGG: hha:Hhal_1211 fis family transcriptional regulator~SPTR: A1WWC4 Transcriptional regulator%2C Fis family gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1335 Trad_1336 Trad_1336 Trad_1336 1431934 1433838 - ATP-dependent metalloprotease FtsH COGs: COG0465 ATP-dependent Zn protease~InterProIPR003960:IPR011546:IPR003959:IPR000642:IPR 003593:IPR005936~KEGG: ttj:TTHA1492 cell division protein FtsH~PFAM: peptidase M41%3B AAA ATPase central domain protein%3B peptidase M41 FtsH extracellular~PRIAM: Microtubule-severing ATPase~SMART: AAA ATPase~SPTR: C1XQY3 Membrane protease FtsH catalytic subunit~TIGRFAM: ATP-dependent metalloprotease FtsH~PFAM: Peptidase family M41%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent metalloprotease FtsH gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1336 Trad_1337 Trad_1337 Trad_1337 1433980 1435299 - replicative DNA helicase COGs: COG0305 Replicative DNA helicase~InterPro IPR007694:IPR007693:IPR007692:IPR016136~KEGG: ttj:TTHA1470 replicative DNA helicase DnaB~PFAM: DnaB domain protein helicase domain protein~SPTR: C1XUS2 Primary replicative DNA helicase~TIGRFAM: replicative DNA helicase~PFAM: DnaB-like helicase N terminal domain%3B DnaB-like helicase C terminal domain~TIGRFAM: replicative DNA helicase gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1337 Trad_1338 Trad_1338 Trad_1338 1435632 1437368 + protein of unknown function DUF205 COGs: COG5322 dehydrogenase~InterPro IPR003811:IPR006151:IPR016040~KEGG: dge:Dgeo_1012 hypothetical protein~PFAM: protein of unknown function DUF205%3B Shikimate/quinate 5-dehydrogenase~SPTR: Q1IZM2 Membrane domain and Glutamyl-tRNAGlu reductase-like NAD(P) binding domain~PFAM: Domain of unknown function (DUF205)%3B Shikimate / quinate 5-dehydrogenase~TIGRFAM: conserved hypothetical integral membrane protein TIGR00023 gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1338 Trad_1339 Trad_1339 Trad_1339 1437365 1438159 + ribosomal L11 methyltransferase COGs: COG2264 Ribosomal protein L11 methylase~InterPro IPR010456~KEGG: ddr:Deide_13790 putative ribosomal protein L11 methyltransferase (L11 Mtase)~PFAM: ribosomal L11 methyltransferase~SPTR: C1CVV3 Putative Ribosomal protein L11 methyltransferase (L11 Mtase)~PFAM: Ribosomal protein L11 methyltransferase (PrmA)~TIGRFAM: ribosomal protein L11 methyltransferase gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1339 Trad_1340 Trad_1340 Trad_1340 1438156 1438263 + conserved hypothetical protein KEGG: hypothetical protein LOC689177~SPTR: Q03LS6 Possible cell surface protein gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1340 Trad_1341 Trad_1341 Trad_1341 1438260 1438973 + protein of unknown function DUF558 COGs: COG1385 conserved hypothetical protein~InterPro IPR006700:IPR015947~KEGG: ddr:Deide_13800 hypothetical protein~PFAM: protein of unknown function DUF558~SPTR: C1CVV4 Putative uncharacterized protein~PFAM: RNA methyltransferase~TIGRFAM: RNA methyltransferase%2C RsmE family gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1341 Trad_1342 Trad_1342 Trad_1342 1438982 1439392 + conserved hypothetical protein KEGG: dge:Dgeo_0837 hypothetical protein~SPTR: Q1J045 Putative uncharacterized protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1342 Trad_1343 Trad_1343 Trad_1343 1439519 1441741 - protein-export membrane protein SecD COGs: COG0342 Preprotein translocase subunit SecD~InterPro IPR003335:IPR005791:IPR005665~KEGG: ttj:TTHA0697 bifunctional preprotein translocase subunit SecD/SecF~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Q72KF0 Probable protein-export membrane protein~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecF~PFAM: Protein export membrane protein%3B SecD/SecF GG Motif~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecF gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1343 Trad_1344 Trad_1344 Trad_1344 1441817 1442257 - hypothetical protein KEGG: hypothetical protein LOC100156230~SPTR: Q4FX85 Putative uncharacterized protein gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1344 Trad_1345 Trad_1345 Trad_1345 1442330 1444075 - translation initiation factor IF-2 COGs: COG0532 Translation initiation factor 2 (IF-2%3B GTPase)~InterProIPR000178:IPR006847:IPR000795:IPR004161:IPR 005225:IPR009000~KEGG: dge:Dgeo_1236 translation initiation factor IF-2~PFAM: protein synthesis factor GTP-binding%3B translation initiation factor IF-2 domain protein%3B elongation factor Tu domain 2 protein~SPTR: Q1IZ02 Translation initiation factor IF-2~TIGRFAM: translation initiation factor IF-2%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Translation-initiation factor 2%3B Translation initiation factor IF-2%2C N-terminal region%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation initiation factor IF-2 gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1345 Trad_1346 Trad_1346 Trad_1346 1444105 1444440 - protein of unknown function DUF448 COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination~InterPro IPR007393~KEGG: dra:DR_1798 hypothetical protein~PFAM: protein of unknown function DUF448~SPTR: Q9RTG6 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF448) gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1346 Trad_1347 Trad_1347 Trad_1347 1444449 1445642 - transcription termination factor NusA COGs: COG0195 Transcription elongation factor~InterProIPR004088:IPR003029:IPR013735:IPR010213:IPR 012340:IPR015946:IPR009019:IPR016027~KEGG: ddr:Deide_10380 putative transcription elongation factor NusA~PFAM: NusA domain protein%3B RNA binding S1 domain protein~SPTR: C1CUR1 Putative Transcription elongation factor NusA~TIGRFAM: transcription termination factor NusA~PFAM: NusA N-terminal domain%3B S1 RNA binding domain~TIGRFAM: transcription termination factor NusA gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1347 Trad_1348 Trad_1348 Trad_1348 1445674 1446114 - protein of unknown function DUF150 InterPro IPR003728~KEGG: ddr:Deide_10390 hypothetical protein~PFAM: protein of unknown function DUF150~SPTR: C1XVS4 Uncharacterized conserved protein~PFAM: Uncharacterised BCR%2C YhbC family COG0779 gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1348 Trad_1349 Trad_1349 Trad_1349 1446525 1447691 + aminotransferase class V COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase~InterPro IPR020578:IPR000192:IPR015421:IPR015424~KEGG: dge:Dgeo_1114 serine--pyruvate transaminase~PFAM: aminotransferase class V~SPTR: Q1IZC2 Serine--pyruvate transaminase~manually curated~PFAM: Aminotransferase class-V gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1349 Trad_1350 Trad_1350 Trad_1350 1447696 1448286 + hypothetical protein KEGG: met:M446_2233 amine oxidase~SPTR: B0UDH3 Amine oxidase gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1350 Trad_1351 Trad_1351 Trad_1351 1448353 1448679 - hypothetical protein KEGG: MME5%3B NADP malic enzyme %3B K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)~SPTR: Q7XSJ9 Os04g0514400 protein gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1351 Trad_1352 Trad_1352 Trad_1352 1449063 1450115 + phenylalanyl-tRNA synthetase%2C alpha subunit COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit~InterProIPR006195:IPR004188:IPR002319:IPR004529:IPR 010978~KEGG: dra:DR_2354 phenylalanyl-tRNA synthetase subunit alpha~PFAM: phenylalanyl-tRNA synthetase class IIc%3B aminoacyl tRNA synthetase class II domain protein~SPTR: Q9RRX8 Phenylalanyl-tRNA synthetase alpha chain~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: tRNA synthetases class II core domain (F)%3B Aminoacyl tRNA synthetase class II%2C N-terminal domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1352 Trad_1353 Trad_1353 Trad_1353 1450112 1452550 + phenylalanyl-tRNA synthetase%2C beta subunit COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit~InterProIPR020003:IPR002547:IPR005121:IPR005146:IPR 005147:IPR004532:IPR012340:IPR020825:IPR016027:IPR009061~KEGG: ttj:TTHA1959 phenylalanyl-tRNA synthetase subunit beta~PFAM: B3/4 domain protein%3B t-RNA-binding domain protein%3B tRNA synthetase B5%3B ferredoxin-fold anticodon-binding~SPTR: P27002 Phenylalanyl-tRNA synthetase beta chain~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit~PFAM: tRNA synthetase B5 domain%3B Ferredoxin-fold anticodon binding domain%3B B3/4 domain%3B Putative tRNA binding domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit%2C non-spirochete bacterial gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1353 Trad_1354 Trad_1354 Trad_1354 1453085 1454917 + glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains~InterPro IPR017932:IPR000583:IPR001347:IPR005855~KEGG: dge:Dgeo_0010 glucosamine--fructose-6-phosphate aminotransferase~PFAM: glutamine amidotransferase class-II%3B sugar isomerase (SIS)~SPTR: Q1J2H0 Glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing~TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: SIS domain%3B Glutamine amidotransferases class-II~TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1354 Trad_1355 Trad_1355 Trad_1355 1454984 1456303 + histidinol dehydrogenase COGs: COG0141 Histidinol dehydrogenase~InterPro IPR001692:IPR012131:IPR016161~KEGG: dra:DR_2140 histidinol dehydrogenase~PFAM: Histidinol dehydrogenase~PRIAM: Histidinol dehydrogenase~SPTR: Q9RSI4 Histidinol dehydrogenase~TIGRFAM: histidinol dehydrogenase~PFAM: Histidinol dehydrogenase~TIGRFAM: histidinol dehydrogenase gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1355 Trad_1356 Trad_1356 Trad_1356 1456360 1456890 + protein of unknown function DUF218 COGs: COG1434 conserved hypothetical protein~InterPro IPR010916:IPR003848~KEGG: ddr:Deide_07400 conserved hypothetical protein%2C precursor~PFAM: protein of unknown function DUF218~SPTR: Q1IWT8 Putative uncharacterized protein~PFAM: DUF218 domain gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1356 Trad_1357 Trad_1357 Trad_1357 1456890 1457588 + phospholipase/Carboxylesterase COGs: COG0400 esterase~InterPro IPR003140~KEGG: cpc:Cpar_0347 phospholipase/carboxylesterase~PFAM: phospholipase/Carboxylesterase~SPTR: B3QKY3 Phospholipase/Carboxylesterase~PFAM: Phospholipase/Carboxylesterase gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1357 Trad_1358 Trad_1358 Trad_1358 1457598 1458431 - TPR repeat-containing protein InterProIPR019734:IPR013026:IPR001440:IPR013105:IPR 011990~KEGG: dge:Dgeo_1144 tetratricopeptide TPR_2~PFAM: TPR repeat-containing protein%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide repeat~SPTR: Q1IZ93 Tetratricopeptide TPR_2 gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1358 Trad_1359 Trad_1359 Trad_1359 1458567 1459910 + carboxyl-terminal protease COGs: COG0793 Periplasmic protease~InterPro IPR001478:IPR005151:IPR004447~KEGG: tth:TTC0929 tail-specific protease~PFAM: peptidase S41%3B PDZ/DHR/GLGF domain protein~SMART: peptidase S41%3B PDZ/DHR/GLGF domain protein~SPTR: C1XLG3 C-terminal processing peptidase-2~TIGRFAM: carboxyl-terminal protease~PFAM: Peptidase family S41%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: C-terminal peptidase (prc) gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1359 Trad_1360 Trad_1360 Trad_1360 1460000 1461586 - phosphoenolpyruvate carboxykinase (ATP) COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP)~InterPro IPR001272:IPR008210:IPR013035~KEGG: swi:Swit_5391 phosphoenolpyruvate carboxykinase~PFAM: phosphoenolpyruvate carboxykinase (ATP)~PRIAM: Phosphoenolpyruvate carboxykinase (ATP)~SPTR: A5VGT3 Phosphoenolpyruvate carboxykinase (ATP)~TIGRFAM: phosphoenolpyruvate carboxykinase (ATP)~PFAM: Phosphoenolpyruvate carboxykinase~TIGRFAM: phosphoenolpyruvate carboxykinase (ATP) gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1360 Trad_1361 Trad_1361 Trad_1361 1462130 1462249 - hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1361 Trad_1362 Trad_1362 Trad_1362 1462403 1462582 + conserved hypothetical protein KEGG: oan:Oant_0905 hypothetical protein gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1362 Trad_1363 Trad_1363 Trad_1363 1462889 1465336 - transcriptional regulator domain protein InterPro IPR001867~KEGG: ttj:TTHA0029 hypothetical protein~PFAM: transcriptional regulator domain protein~SPTR: C1XV41 Putative uncharacterized protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1363 Trad_1364 Trad_1364 Trad_1364 1465959 1467191 + ROK family protein COGs: COG1940 Transcriptional regulator/sugar kinase~InterPro IPR001808:IPR000600~KEGG: rmr:Rmar_2445 ROK family protein~PFAM: ROK family protein%3B regulatory protein Crp~SPTR: D0MF67 ROK family protein~PFAM: ROK family gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1364 Trad_1365 Trad_1365 Trad_1365 1467432 1467650 - phosphoserine phosphatase KEGG: ccs:CCNA_02182 phosphoserine phosphatase gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1365 Trad_1366 Trad_1366 Trad_1366 1468116 1468280 - hypothetical protein KEGG: eba:ebA3703 putative Flp pilus assembly protein~SPTR: Q5P3A5 Putative Flp pilus assembly protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1366 Trad_1367 Trad_1367 Trad_1367 1468370 1469197 + hypothetical protein KEGG: col-102%3B COLlagen~SPTR: Q9GZF7 Collagen protein 102%2C partially confirmed by transcript evidence gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1367 Trad_1368 Trad_1368 Trad_1368 1469202 1469534 + conserved hypothetical protein KEGG: dge:Dgeo_1350 hypothetical protein~SPTR: Q1IYN9 Putative uncharacterized protein gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1368 Trad_1369 Trad_1369 Trad_1369 1469674 1470459 + Enoyl-CoA hydratase/isomerase COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase~InterPro IPR018376:IPR001753~KEGG: ttj:TTHA0290 enoyl-CoA hydratase~PFAM: Enoyl-CoA hydratase/isomerase~SPTR: C1XJJ1 Enoyl-CoA hydratase%3B short chain enoyl-CoA hydratase~PFAM: Enoyl-CoA hydratase/isomerase family gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1369 Trad_1370 Trad_1370 Trad_1370 1470460 1472073 + Amidohydrolase 3 COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold~InterPro IPR013108:IPR011059~KEGG: cag:Cagg_1321 amidohydrolase 3~PFAM: Amidohydrolase 3~SPTR: B8G8G6 Amidohydrolase 3~PFAM: Amidohydrolase family gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1370 Trad_1371 Trad_1371 Trad_1371 1472070 1473335 + gamma-glutamyl phosphate reductase COGs: COG0014 Gamma-glutamyl phosphate reductase~InterProIPR020593:IPR012134:IPR015590:IPR000965:IPR 016162:IPR016163:IPR016161~KEGG: mta:Moth_0563 gamma-glutamyl phosphate reductase~PFAM: Aldehyde Dehydrogenase~PRIAM: Glutamate-5-semialdehyde dehydrogenase~SPTR: Q2RKZ6 Gamma-glutamyl phosphate reductase~TIGRFAM: gamma-glutamyl phosphate reductase~PFAM: Aldehyde dehydrogenase family~TIGRFAM: gamma-glutamyl phosphate reductase gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1371 Trad_1372 Trad_1372 Trad_1372 1473339 1474082 - conserved hypothetical protein KEGG: sti:Sthe_0192 hypothetical protein~SPTR: D1C693 Putative uncharacterized protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1372 Trad_1373 Trad_1373 Trad_1373 1474390 1476318 + DNA topoisomerase (ATP-hydrolyzing) COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit~InterProIPR018522:IPR003594:IPR013506:IPR006171:IPR 002288:IPR001241:IPR013759:IPR000565:IPR013760:IPR020568~KEGG: dge:Dgeo_0546 DNA topoisomerase (ATP-hydrolyzing)~PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein%3B ATP-binding region ATPase domain protein%3B TOPRIM domain protein%3B DNA gyrase subunit B domain protein~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein~SPTR: Q1J0Y6 DNA topoisomerase (ATP-hydrolyzing)~PFAM: Toprim domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B DNA gyrase B%3B DNA gyrase B subunit%2C carboxyl terminus~TIGRFAM: DNA gyrase%2C B subunit gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1373 Trad_1374 Trad_1374 Trad_1374 1476399 1477103 - Deoxyribonuclease V COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V)~InterPro IPR007581~KEGG: ttj:TTHA1347 endonuclease V~PFAM: Endonuclease V~PRIAM: Deoxyribonuclease V~SPTR: C1XUY5 Endonuclease V~PFAM: Endonuclease V gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1374 Trad_1375 Trad_1375 Trad_1375 1477164 1477430 + hypothetical protein KEGG: oca:OCAR_4433 dipeptide transport system permease protein DppB~SPTR: A3Z249 Putative uncharacterized protein gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1375 Trad_1376 Trad_1376 Trad_1376 1477492 1478154 - YjeF-family domain protein COGs: COG0062 conserved hypothetical protein~InterPro IPR004443~KEGG: met:M446_6586 carbohydrate kinase%2C YjeF related protein~PFAM: YjeF-family domain protein~SPTR: Q1NJB8 Putative uncharacterized protein~PFAM: YjeF-related protein N-terminus~TIGRFAM: yjeF N-terminal region gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1376 Trad_1377 Trad_1377 Trad_1377 1478225 1478950 - protein of unknown function DUF28 COGs: COG0217 conserved hypothetical protein~InterPro IPR002876:IPR017856~KEGG: dge:Dgeo_2194 hypothetical protein~PFAM: protein of unknown function DUF28~SPTR: Q1IW96 UPF0082 protein Dgeo_2194~PFAM: Domain of unknown function DUF28~TIGRFAM: conserved hypothetical protein TIGR01033 gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1377 Trad_1378 Trad_1378 Trad_1378 1479059 1479823 - glycosyl transferase%2C WecB/TagA/CpsF family COGs: COG1922 Teichoic acid biosynthesis protein~InterPro IPR004629~KEGG: dau:Daud_2098 WecB/TagA/CpsF family glycosyl transferase~PFAM: glycosyl transferase WecB/TagA/CpsF~PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase~SPTR: C1XQG0 N-acetylmannosaminyltransferase~TIGRFAM: glycosyl transferase%2C WecB/TagA/CpsF family~PFAM: Glycosyl transferase WecB/TagA/CpsF family~TIGRFAM: bacterial polymer biosynthesis proteins%2C WecB/TagA/CpsF family gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1378 Trad_1379 Trad_1379 Trad_1379 1479834 1480631 - 2-phosphosulfolactate phosphatase COGs: COG2045 Phosphosulfolactate phosphohydrolase~InterPro IPR005238~KEGG: ttj:TTHA1438 hypothetical protein~PFAM: 2-phosphosulfolactate phosphatase~SPTR: C1XIK0 2-phosphosulfolactate phosphatase~PFAM: 2-phosphosulpholactate phosphatase~TIGRFAM: 2-phosphosulfolactate phosphatase gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1379 Trad_1380 Trad_1380 Trad_1380 1480906 1482456 + protein of unknown function UCP012535 COGs: COG4365 conserved hypothetical protein~InterPro IPR011199~KEGG: dge:Dgeo_1276 hypothetical protein~PFAM: protein of unknown function UCP012535~SPTR: Q1IYW2 UPF0747 protein Dgeo_1276~PFAM: Uncharacterized protein conserved in bacteria (DUF2317) gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1380 Trad_1381 Trad_1381 Trad_1381 1482543 1484060 - inosine-5'-monophosphate dehydrogenase COGs: COG0516 IMP dehydrogenase/GMP reductase~InterProIPR015875:IPR018529:IPR000644:IPR001093:IPR 005990:IPR013785~KEGG: dge:Dgeo_0548 inosine-5'-monophosphate dehydrogenase~PFAM: IMP dehydrogenase/GMP reductase%3B CBS domain containing protein~PRIAM: IMP dehydrogenase~SMART: CBS domain containing protein~SPTR: Q1J0Y4 Inosine-5'-monophosphate dehydrogenase~TIGRFAM: inosine-5'-monophosphate dehydrogenase~PFAM: CBS domain%3B IMP dehydrogenase / GMP reductase domain~TIGRFAM: inosine-5'-monophosphate dehydrogenase gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1381 Trad_1382 Trad_1382 Trad_1382 1484087 1484491 - thioesterase superfamily protein COGs: COG0824 thioesterase~InterPro IPR006683:IPR006684~KEGG: dra:DR_0902 hypothetical protein~PFAM: thioesterase superfamily protein~SPTR: C1XK60 Putative uncharacterized protein~PFAM: Thioesterase superfamily~TIGRFAM: conserved hypothetical protein TIGR00051 gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1382 Trad_1383 Trad_1383 Trad_1383 1484488 1484784 - ribosome-binding factor A COGs: COG0858 Ribosome-binding factor A~InterPro IPR020053:IPR000238:IPR015946~KEGG: ddr:Deide_15450 putative ribosome-binding factor A~PFAM: ribosome-binding factor A~SPTR: C1CWE1 Putative Ribosome-binding factor A~TIGRFAM: ribosome-binding factor A~PFAM: Ribosome-binding factor A~TIGRFAM: ribosome-binding factor A gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1383 Trad_1384 Trad_1384 Trad_1384 1484932 1486554 + oxidoreductase molybdopterin binding protein COGs: COG2041 Sulfite oxidase~InterProIPR000551:IPR000572:IPR005066:IPR006311:IPR 014756~KEGG: sti:Sthe_2181 oxidoreductase molybdopterin binding protein~PFAM: oxidoreductase molybdopterin binding%3B Mo-co oxidoreductase dimerisation domain~SPTR: B9XEB3 Oxidoreductase molybdopterin binding~PFAM: Mo-co oxidoreductase dimerisation domain%3B Oxidoreductase molybdopterin binding domain~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1384 Trad_1385 Trad_1385 Trad_1385 1486630 1487610 - A/G-specific adenine glycosylase COGs: COG1194 A/G-specific DNA glycosylase~InterProIPR019775:IPR004036:IPR003265:IPR003651:IPR 005760:IPR000086:IPR011257:IPR015797~KEGG: afw:Anae109_1906 A/G-specific adenine glycosylase~PFAM: HhH-GPD family protein%3B iron-sulfur cluster loop~SMART: HhH-GPD family protein%3B iron-sulfur cluster loop~SPTR: A7HBL3 A/G-specific adenine glycosylase~TIGRFAM: A/G-specific adenine glycosylase~PFAM: HhH-GPD superfamily base excision DNA repair protein%3B Helix-hairpin-helix motif~TIGRFAM: A/G-specific adenine glycosylase gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1385 Trad_1386 Trad_1386 Trad_1386 1487811 1488527 + SagB-type dehydrogenase domain protein InterPro IPR020051:IPR000415~KEGG: ttj:TTHA0021 putative NADPH oxidoreductase~SPTR: Q72G71 Glucose-1-phosphate adenylyltransferase~TIGRFAM: SagB-type dehydrogenase domain~PFAM: Nitroreductase family~TIGRFAM: SagB-type dehydrogenase domain gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1386 Trad_1387 Trad_1387 Trad_1387 1488556 1488933 + AIG2 family protein COGs: COG2105 conserved hypothetical protein~InterPro IPR009288:IPR013024~KEGG: dge:Dgeo_2184 hypothetical protein~PFAM: AIG2 family protein~SPTR: Q1IWA6 Putative uncharacterized protein~PFAM: AIG2-like family gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1387 Trad_1388 Trad_1388 Trad_1388 1489303 1490454 + homocitrate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR002034:IPR000891:IPR011872:IPR013785~KEGG: ttj:TTHA1914 homocitrate synthase~PFAM: pyruvate carboxyltransferase~PRIAM: Homocitrate synthase~SPTR: Q5SH16 Homocitrate synthase~TIGRFAM: homocitrate synthase~PFAM: HMGL-like~TIGRFAM: homocitrate synthase gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1388 Trad_1389 Trad_1389 Trad_1389 1490451 1491722 + homoaconitate hydratase family protein COGs: COG0065 3-isopropylmalate dehydratase large subunit~InterProIPR018136:IPR001030:IPR011826:IPR006251:IPR 015931:IPR015932~KEGG: tth:TTC1547 3-isopropylmalate dehydratase large subunit~PFAM: aconitate hydratase domain protein~SPTR: B7A8X0 3-isopropylmalate dehydratase~TIGRFAM: homoaconitate hydratase family protein%3B 3-isopropylmalate dehydratase~PFAM: Aconitase family (aconitate hydratase)~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit%3B homoaconitate hydratase family protein gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1389 Trad_1390 Trad_1390 Trad_1390 1491722 1492219 + 3-isopropylmalate dehydratase%2C small subunit COGs: COG0066 3-isopropylmalate dehydratase small subunit~InterPro IPR000573:IPR011827:IPR015928~KEGG: tth:TTC1546 homoaconitate hydratase small subunit~PFAM: aconitate hydratase domain protein~SPTR: Q9ZND9 Homoaconitase small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: Aconitase C-terminal domain~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1390 Trad_1391 Trad_1391 Trad_1391 1492278 1492445 + lysine biosynthesis protein LysW InterPro IPR005906~KEGG: ttj:TTHA1908 hypothetical protein~SPTR: Q9ZND7 OrfF~TIGRFAM: lysine biosynthesis protein LysW~TIGRFAM: lysine biosynthesis protein LysW gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1391 Trad_1392 Trad_1392 Trad_1392 1492527 1493432 + lysine biosynthesis enzyme LysX COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)~InterProIPR011761:IPR013651:IPR004666:IPR011870:IPR 016185~KEGG: dge:Dgeo_1151 lysine biosynthesis enzyme LysX~PFAM: RimK domain protein ATP-grasp~SPTR: Q1IZ86 Lysine biosynthesis enzyme LysX~TIGRFAM: lysine biosynthesis enzyme LysX%3B alpha-L-glutamate ligase%2C RimK family~PFAM: RimK-like ATP-grasp domain~TIGRFAM: Lysine biosynthesis enzyme LysX%3B alpha-L-glutamate ligases%2C RimK family gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1392 Trad_1393 Trad_1393 Trad_1393 1493490 1493924 - PIN domain protein family protein COGs: COG1848 nucleic acid-binding protein contains PIN domain~InterPro IPR002716:IPR006226~KEGG: mbt:JTY_2889 hypothetical protein~PFAM: PilT protein domain protein~SPTR: A4BQZ7 Putative uncharacterized protein~TIGRFAM: PIN domain protein family protein~PFAM: PIN domain~TIGRFAM: Mycobacterium tuberculosis PIN domain family gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1393 Trad_1394 Trad_1394 Trad_1394 1493921 1494169 - transcriptional regulator%2C CopG family InterPro IPR002145~KEGG: mbt:JTY_2888 hypothetical protein~PFAM: CopG domain protein DNA-binding domain protein~SPTR: C1RL13 Ribbon-helix-helix protein%2C copG family~PFAM: Uncharacterized protein conserved in bacteria (DUF2191) gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1394 Trad_1395 Trad_1395 Trad_1395 1494226 1495266 + N-acetyl-gamma-glutamyl-phosphate reductase COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase~InterPro IPR000534:IPR012280:IPR000706:IPR016040~KEGG: dge:Dgeo_0685 N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase NAD - binding%3B Semialdehyde dehydrogenase dimerisation region~PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase~SPTR: Q1J0J7 N-acetyl-gamma-glutamyl-phosphate reductase~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase%2C common form gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1395 Trad_1396 Trad_1396 Trad_1396 1495374 1496816 + amidohydrolase COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase~InterPro IPR006680:IPR011059~KEGG: sti:Sthe_0262 amidohydrolase~PFAM: amidohydrolase~SPTR: D1C6U0 Amidohydrolase~PFAM: Amidohydrolase family gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1396 Trad_1397 Trad_1397 Trad_1397 1496934 1497224 + CopG domain protein DNA-binding domain protein InterPro IPR002145~KEGG: mbt:JTY_2567 hypothetical protein~PFAM: CopG domain protein DNA-binding domain protein~SPTR: A8UV44 Putative uncharacterized protein~PFAM: Ribbon-helix-helix protein%2C copG family gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1397 Trad_1398 Trad_1398 Trad_1398 1497221 1497628 + PilT protein domain protein InterPro IPR002716~KEGG: mbt:JTY_0597 hypothetical protein~PFAM: PilT protein domain protein~SPTR: C4DRM8 Predicted nucleic acid-binding protein%2C contains PIN domain~PFAM: PIN domain gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1398 Trad_1399 Trad_1399 Trad_1399 1497625 1498428 + acetylglutamate kinase COGs: COG0548 Acetylglutamate kinase~InterPro IPR011148:IPR001048:IPR004662:IPR001057~KEGG: dra:DR_1420 acetylglutamate/acetylaminoadipate kinase~PFAM: aspartate/glutamate/uridylate kinase~SPTR: Q9RUG6 Putative acetylglutamate kinase-like protein DR_1420~TIGRFAM: acetylglutamate kinase~PFAM: Amino acid kinase family~TIGRFAM: acetylglutamate kinase gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1399 Trad_1400 Trad_1400 Trad_1400 1498428 1498892 + NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR020084:IPR000086:IPR020476:IPR015797~KEGG: ttr:Tter_2108 NUDIX hydrolase~PFAM: NUDIX hydrolase~SPTR: D1CGY9 NUDIX hydrolase~PFAM: NUDIX domain gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1400 Trad_1401 Trad_1401 Trad_1401 1498900 1500105 + acetylornithine and succinylornithine aminotransferase COGs: COG4992 Ornithine/acetylornithine aminotransferase~InterPro IPR005814:IPR004636:IPR015421:IPR015424~KEGG: ttj:TTHA1755 acetylornithine/acetyl-lysine aminotransferase~PFAM: aminotransferase class-III~SPTR: B7A5Y2 Acetylornithine and succinylornithine aminotransferase~TIGRFAM: acetylornithine and succinylornithine aminotransferase~PFAM: Aminotransferase class-III~TIGRFAM: acetylornithine and succinylornithine aminotransferases gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1401 Trad_1402 Trad_1402 Trad_1402 1500255 1500692 - PIN domain protein family protein COGs: COG1848 nucleic acid-binding protein contains PIN domain~InterPro IPR002716:IPR006226~KEGG: bcv:Bcav_4069 PIN domain protein family protein~PFAM: PilT protein domain protein~SPTR: C5C5V2 PIN domain protein family protein~TIGRFAM: PIN domain protein family protein~PFAM: PIN domain~TIGRFAM: Mycobacterium tuberculosis PIN domain family gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1402 Trad_1403 Trad_1403 Trad_1403 1500689 1500931 - conserved hypothetical protein KEGG: sfu:Sfum_0895 hypothetical protein~SPTR: A0LGN9 Putative uncharacterized protein~PFAM: Ribbon-helix-helix protein%2C copG family gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1403 Trad_1404 Trad_1404 Trad_1404 1501015 1502097 + N-acetyl-ornithine/N-acetyl-lysine deacetylase COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR001261:IPR002933:IPR010175~KEGG: dge:Dgeo_1391 acetyl-lysine deacetylase~PFAM: peptidase M20~SPTR: Q1IYJ8 N-acetyl-ornithine/N-acetyl-lysine deacetylase~TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase~PFAM: Peptidase family M20/M25/M40~TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1404 Trad_1405 Trad_1405 Trad_1405 1502156 1503037 - diacylglycerol kinase catalytic region COGs: COG1597 Sphingosine kinase~InterPro IPR001206~KEGG: ddr:Deide_04630 putative diacylglycerol kinase~PFAM: diacylglycerol kinase catalytic region~SMART: diacylglycerol kinase catalytic region~SPTR: C1XXN7 Sphingosine/diacylglycerol kinase-like enzyme~PFAM: Diacylglycerol kinase catalytic domain gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1405 Trad_1406 Trad_1406 Trad_1406 1503619 1505700 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase~InterProIPR018376:IPR001753:IPR006176:IPR006108:IPR 016040:IPR013328:IPR008927~KEGG: dge:Dgeo_0754 3-hydroxyacyl-CoA dehydrogenase%2C NAD-binding~PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~SPTR: Q1J0C8 3-hydroxyacyl-CoA dehydrogenase%2C NAD-binding~PFAM: Enoyl-CoA hydratase/isomerase family%3B 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%3B 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1406 Trad_1407 Trad_1407 Trad_1407 1505697 1506479 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR016040:IPR002347~KEGG: dge:Dgeo_2403 gluconate 5-dehydrogenase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Q1J3U7 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1407 Trad_1408 Trad_1408 Trad_1408 1506598 1507533 + heat shock protein DnaJ domain protein COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~InterPro IPR018253:IPR001623:IPR003095:IPR008971~KEGG: afw:Anae109_4473 chaperone protein DnaJ~PFAM: heat shock protein DnaJ domain protein~SMART: heat shock protein DnaJ domain protein~SPTR: A7HIV5 Chaperone protein dnaJ~PFAM: DnaJ domain gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1408 Trad_1409 Trad_1409 Trad_1409 1507573 1508013 + transcriptional regulator%2C MerR family InterPro IPR000551:IPR009061~KEGG: dra:DR_0934 MerR family transcriptional regulator~PFAM: regulatory protein MerR~SMART: regulatory protein MerR~SPTR: Q9RVT8 Transcriptional regulator%2C MerR family~PFAM: MerR family regulatory protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1409 Trad_1410 Trad_1410 Trad_1410 1508056 1509465 + peptidase M20 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR002933:IPR011650~KEGG: dge:Dgeo_1547 peptidase M20~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: Q1IY42 Peptidase M20~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1410 Trad_1411 Trad_1411 Trad_1411 1509538 1510503 - agmatinase COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family~InterPro IPR020855:IPR006035:IPR005925:IPR005924~KEGG: tro:trd_0528 putative agmatinase~PFAM: Arginase/agmatinase/formiminoglutamase~PRIAM: Agmatinase~SPTR: B9KYI2 Putative agmatinase~TIGRFAM: agmatinase~PFAM: Arginase family~TIGRFAM: agmatinase gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1411 Trad_1412 Trad_1412 Trad_1412 1510517 1511044 - transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~InterProIPR000485:IPR019887:IPR019888:IPR011991:IPR 011008~KEGG: cpi:Cpin_3441 transcriptional regulator%2C AsnC family~PFAM: Transcription regulator%2C AsnC-type-like~SMART: Transcription regulator%2C AsnC-type~SPTR: C7PTB8 Transcriptional regulator%2C AsnC family~PFAM: AsnC family gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1412 Trad_1413 Trad_1413 Trad_1413 1511190 1512473 - Amidase COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~InterPro IPR020556:IPR000120~KEGG: sco:SCO7601 amidase~PFAM: Amidase~SPTR: Q9EWI3 Putative amidase~PFAM: Amidase gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1413 Trad_1414 Trad_1414 Trad_1414 1512598 1513746 + putative transcriptional regulator%2C GntR family COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs~InterPro IPR004839:IPR015421:IPR015422:IPR015424~KEGG: dra:DR_1030 aminotransferase%2C putative~PFAM: aminotransferase class I and II~SPTR: C1XM78 Transcriptional regulator with HTH domain and aminotransferase domain~PFAM: Aminotransferase class I and II gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1414 Trad_1415 Trad_1415 Trad_1415 1513824 1514888 + extracellular solute-binding protein family 1 COGs: COG0687 Spermidine/putrescine-binding periplasmic protein~InterPro IPR017909:IPR006059:IPR006311~KEGG: smd:Smed_2409 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q1YIK7 Putative spermidine/putrescine ABC transporter~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1415 Trad_1416 Trad_1416 Trad_1416 1514890 1515969 + ABC transporter related protein COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterProIPR017871:IPR003439:IPR013611:IPR003593:IPR 008995~KEGG: rhi:NGR_c25320 putative ATP-binding component of ABC transporter~PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~SPTR: Q92MW0 Spermidine/putrescine ABC transporter ATP-binding subunit~PFAM: ABC transporter%3B TOBE domain gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1416 Trad_1417 Trad_1417 Trad_1417 1515966 1516808 + binding-protein-dependent transport systems inner membrane component COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I~InterPro IPR000515~KEGG: rhi:NGR_c25310 ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1YIK9 ABC-type spermidine/putrescine transport system~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1417 Trad_1418 Trad_1418 Trad_1418 1516805 1517599 + binding-protein-dependent transport systems inner membrane component COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II~InterPro IPR000515~KEGG: sme:SMc01963 spermidine/putrescine ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1YIL0 ABC-type spermidine/putrescine transport system~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1418 Trad_1419 Trad_1419 Trad_1419 1517679 1518538 - Transposase-like protein COGs: COG3293 Transposase and inactivated derivatives~KEGG: dge:Dgeo_2686 putative IS1648 transposase~SPTR: Q1J315 Putative IS1648 transposase~manually curated~PFAM: Transposase DDE domain gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1419 Trad_1420 Trad_1420 Trad_1420 1518583 1521987 - trehalose synthase COGs: COG0366 Glycosidase~InterProIPR006047:IPR006589:IPR012810:IPR013781:IPR 013780:IPR017853:IPR011009~KEGG: sru:SRU_0847 trehalose synthase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: Q2S499 Trehalose synthase~TIGRFAM: trehalose synthase~PFAM: Alpha amylase%2C catalytic domain~TIGRFAM: trehalose synthase-fused probable maltokinase%3B trehalose synthase gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1420 Trad_1421 Trad_1421 Trad_1421 1522020 1524002 - alpha amylase catalytic region COGs: COG0366 Glycosidase~InterPro IPR006047:IPR006589:IPR013781:IPR017853~KEGG: sru:SRU_0848 alpha amylase family protein~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: Q2S498 Alpha amylase family protein~PFAM: Alpha amylase%2C catalytic domain%3B Domain of unknown function (DUF3416) gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1421 Trad_1422 Trad_1422 Trad_1422 1524330 1525523 - Alcohol dehydrogenase zinc-binding domain protein COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase~InterPro IPR013154:IPR013149:IPR011032:IPR016040~KEGG: rop:ROP_26740 putative oxidoreductase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~SPTR: B4V724 Alcohol dehydrogenase zinc-binding domain containing protein~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1422 Trad_1423 Trad_1423 Trad_1423 1525528 1525995 - conserved hypothetical protein KEGG: bcv:Bcav_0406 hypothetical protein~SPTR: C5BWL2 Putative uncharacterized protein gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1423 Trad_1424 Trad_1424 Trad_1424 1526083 1526511 + transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: plu:plu4843 IS200 family transposase~PFAM: transposase IS200-family protein~SPTR: Q7M7F4 Transposase%2C IS200 Familly~PFAM: Transposase IS200 like gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1424 Trad_1425 Trad_1425 Trad_1425 1526691 1526855 - hypothetical protein KEGG: mgm:Mmc1_3116 hypothetical protein~SPTR: A0LCB3 Putative uncharacterized protein gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1425 Trad_1426 Trad_1426 Trad_1426 1526967 1527650 + transcriptional regulator%2C TetR family InterProIPR001647:IPR004111:IPR012287:IPR003012:IPR 011075:IPR009057~KEGG: rer:RER_17410 TetR family transcriptional regulator~PFAM: Tetracyclin repressor domain protein%3B regulatory protein TetR~SPTR: B5HIJ1 Putative uncharacterized protein~PFAM: Tetracyclin repressor%2C C-terminal all-alpha domain%3B Bacterial regulatory proteins%2C tetR family gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1426 Trad_1427 Trad_1427 Trad_1427 1528573 1528737 - hypothetical protein gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1427 Trad_1428 Trad_1428 Trad_1428 1528864 1530336 + conserved hypothetical protein KEGG: pap:PSPA7_0138 hypothetical protein~SPTR: A6UXJ9 Putative uncharacterized protein gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1428 Trad_1429 Trad_1429 Trad_1429 1530469 1530762 + Protein of unknown function DUF2442 InterPro IPR018841~KEGG: rrs:RoseRS_1993 hypothetical protein~PFAM: Protein of unknown function DUF2442~SPTR: A5UUS7 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2442) gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1429 Trad_1430 Trad_1430 Trad_1430 1530755 1531015 + conserved hypothetical protein KEGG: rrs:RoseRS_1992 hypothetical protein~SPTR: A5UUS6 Putative uncharacterized protein gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1430 Trad_1431 Trad_1431 Trad_1431 1531184 1531477 + plasmid maintenance system killer COGs: COG3549 Plasmid maintenance system killer protein~InterPro IPR007711~KEGG: syn:ssr5020 hypothetical protein~PFAM: plasmid maintenance system killer~SPTR: A8YIY3 Similar to tr|Q6ZEW0|Q6ZEW0~PFAM: Plasmid maintenance system killer protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1431 Trad_1432 Trad_1432 Trad_1432 1531493 1531801 + plasmid maintenance system antidote protein%2C XRE family COGs: COG3093 Plasmid maintenance system antidote protein~InterPro IPR001387:IPR013430:IPR010982~KEGG: syn:slr5021 hypothetical protein~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Q1PUG1 Putative uncharacterized protein~TIGRFAM: addiction module antidote protein%2C HigA family~PFAM: Helix-turn-helix~TIGRFAM: addiction module antidote protein%2C HigA family gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1432 Trad_1433 Trad_1433 Trad_1433 1531959 1532228 + conserved hypothetical protein KEGG: sti:Sthe_0077 hypothetical protein~SPTR: D1C5K0 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2568) gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1433 Trad_1434 Trad_1434 Trad_1434 1532736 1533635 + phenazine biosynthesis protein PhzF family COGs: COG0384 epimerase PhzC/PhzF homolog~InterPro IPR001412:IPR003719~KEGG: cbi:CLJ_B2388 phenazine biosynthesis protein%2C PhzF family~PFAM: Phenazine biosynthesis PhzC/PhzF protein~SPTR: D1C9F9 Phenazine biosynthesis protein PhzF family~TIGRFAM: phenazine biosynthesis protein PhzF family~PFAM: Phenazine biosynthesis-like protein~TIGRFAM: phenazine biosynthesis protein PhzF family gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1434 Trad_1435 Trad_1435 Trad_1435 1533628 1534353 + RNA-binding S4 domain protein COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase~InterProIPR018496:IPR002942:IPR006145:IPR000748:IPR 020103~KEGG: dge:Dgeo_0763 pseudouridine synthase%2C Rsu~PFAM: RNA-binding S4 domain protein%3B pseudouridine synthase~SMART: RNA-binding S4 domain protein~SPTR: Q1J0B9 Pseudouridine synthase~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase family gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1435 Trad_1436 Trad_1436 Trad_1436 1534331 1534915 + hypoxanthine phosphoribosyltransferase COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase~InterPro IPR000836:IPR005904~KEGG: dra:DR_1376 hypoxanthine-guanine phosphoribosyltransferase~PFAM: phosphoribosyltransferase~PRIAM: Hypoxanthine phosphoribosyltransferase~SPTR: Q9RUK8 Hypoxanthine-guanine phosphoribosyltransferase~TIGRFAM: hypoxanthine phosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: hypoxanthine phosphoribosyltransferase gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1436 Trad_1437 Trad_1437 Trad_1437 1534922 1536064 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047:IPR011055~KEGG: ddr:Deide_09770 putative peptidase%2C M23 family%2C precursor~PFAM: Peptidase M23~SPTR: C1CUJ0 Putative Peptidase%2C M23 family%2C~PFAM: Peptidase family M23 gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1437 Trad_1438 Trad_1438 Trad_1438 1536204 1538204 + hypothetical protein KEGG: ttj:TTHA0745 hypothetical protein~SPTR: Q5SKA3 Putative uncharacterized protein TTHA0745~PFAM: Bacterial cellulose synthase subunit gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1438 Trad_1439 Trad_1439 Trad_1439 1538207 1540150 + General secretory system II protein E domain protein COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR007831:IPR001173~KEGG: ttj:TTHA0743 glycosyltransferase related protein~PFAM: General secretory system II protein E domain protein%3B glycosyl transferase family 2~SPTR: Q5SKA5 Glycosyltransferase related protein~PFAM: GSPII_E N-terminal domain%3B Glycosyl transferase family 2 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1439 Trad_1440 Trad_1440 Trad_1440 1540147 1541505 + conserved hypothetical protein KEGG: ttj:TTHA0742 hypothetical protein~SPTR: Q5SKA6 Putative uncharacterized protein TTHA0742 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1440 Trad_1441 Trad_1441 Trad_1441 1541517 1542524 - glycoside hydrolase family 5 COGs: COG2730 Endoglucanase~InterPro IPR018087:IPR001547:IPR013781:IPR017853~KEGG: pab:PAB0632 endoglucanase~PFAM: glycoside hydrolase family 5~SPTR: Q93Q07 Cellulase~manually curated~PFAM: Cellulase (glycosyl hydrolase family 5) gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1441 Trad_1442 Trad_1442 Trad_1442 1543121 1544635 + alpha amylase catalytic region COGs: COG0366 Glycosidase~InterProIPR006047:IPR006589:IPR013781:IPR006046:IPR 017853~KEGG: ade:Adeh_4127 alpha amylase%2C catalytic region~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: Q2IH30 Alpha amylase%2C catalytic region~PFAM: Alpha amylase%2C catalytic domain gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1442 Trad_1443 Trad_1443 Trad_1443 1545065 1546309 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: bra:BRADO4396 putative sugar ABC transporter%2C periplasmic binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: A4YW63 Putative sugar ABC transporter%2C periplasmic binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1443 Trad_1444 Trad_1444 Trad_1444 1546384 1547427 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: bra:BRADO4395 putative sugar ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A4YW62 Putative sugar ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1444 Trad_1445 Trad_1445 Trad_1445 1547435 1548484 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: ret:RHE_CH02070 sugar ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q2K8I2 Probable sugar ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1445 Trad_1446 Trad_1446 Trad_1446 1548670 1549485 - Cytochrome c oxidase caa3-type%2C assembly factor CtaG-related protein COGs: COG3336 membrane protein~InterPro IPR019108~KEGG: sth:STH2100 hypothetical protein~PFAM: Cytochrome c oxidase caa3-type%2C assembly factor CtaG-related~SPTR: C0AF21 Membrane protein-like protein~PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)~TIGRFAM: cytochrome c oxidase assembly factor CtaG gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1446 Trad_1447 Trad_1447 Trad_1447 1549673 1550932 + CRISPR-associated RAMP protein%2C Cmr1 family COGs: COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537:IPR007522~KEGG: hoh:Hoch_1318 CRISPR-associated RAMP protein%2C Cmr1 family~PFAM: protein of unknown function DUF324~SPTR: C0A713 CRISPR-associated protein%2C Cmr1 family~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr1 family~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr1 family gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1447 Trad_1448 Trad_1448 Trad_1448 1550925 1552865 + CRISPR-associated protein%2C Crm2 family COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs)~InterPro IPR000160:IPR013407~KEGG: rxy:Rxyl_0263 CRISPR-associated Cmr2 family protein~SPTR: Q1AZD8 CRISPR-associated protein%2C Cmr2 family~TIGRFAM: CRISPR-associated protein%2C Crm2 family~PFAM: CRISPR-associated protein~TIGRFAM: CRISPR-associated protein%2C Crm2 family gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1448 Trad_1449 Trad_1449 Trad_1449 1552862 1553944 + CRISPR-associated protein%2C Cmr3 family COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR019117:IPR010165~KEGG: rxy:Rxyl_0262 hypothetical protein~PFAM: CRISPR-associated protein%2C Cmr3~SPTR: Q1AZD9 Putative uncharacterized protein~TIGRFAM: CRISPR-associated protein%2C Cmr3 family~PFAM: CRISPR-associated protein (Cas_Cmr3)~TIGRFAM: CRISPR-associated protein%2C Cmr3 family gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1449 Trad_1450 Trad_1450 Trad_1450 1553945 1554736 + CRISPR-associated RAMP protein%2C Cmr4 family COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537:IPR013410~KEGG: rxy:Rxyl_0261 CRISPR-associated RAMP Cmr4 family protein family protein~PFAM: protein of unknown function DUF324~SPTR: Q1AZE0 CRISPR-associated protein%2C Cmr4 family~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr4 family~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr4 family gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1450 Trad_1451 Trad_1451 Trad_1451 1554733 1555119 + CRISPR-associated protein%2C Cmr5 family InterPro IPR010160~KEGG: rxy:Rxyl_0260 CRISPR-associated Cmr5 family protein~PFAM: CRISPR-associated protein TM1791.1~SPTR: Q1AZE1 CRISPR-associated protein%2C Cmr5 family~TIGRFAM: CRISPR-associated protein%2C Cmr5 family~PFAM: CRISPR-associated protein (Cas_Cmr5)~TIGRFAM: CRISPR-associated protein%2C Cmr5 family gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1451 Trad_1452 Trad_1452 Trad_1452 1555119 1556159 + CRISPR-associated RAMP protein%2C Cmr6 family COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537:IPR010172~KEGG: rxy:Rxyl_0259 CRISPR-associated RAMP Cmr6 family protein~PFAM: protein of unknown function DUF324~SPTR: Q1AZE2 CRISPR-associated protein%2C Cmr6 family~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr6 family~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr6 family gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1452 Trad_1453 Trad_1453 Trad_1453 1556299 1557366 + tryptophanyl-tRNA synthetase COGs: COG0180 Tryptophanyl-tRNA synthetase~InterPro IPR001412:IPR002305:IPR002306:IPR014729~KEGG: hau:Haur_0220 tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib~PRIAM: Tryptophan--tRNA ligase~SPTR: A9B6G9 Tryptophanyl-tRNA synthetase~TIGRFAM: tryptophanyl-tRNA synthetase~PFAM: tRNA synthetases class I (W and Y)~TIGRFAM: tryptophanyl-tRNA synthetase gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1453 Trad_1454 Trad_1454 Trad_1454 1557392 1558285 + metalloenzyme domain protein InterPro IPR006124:IPR017849:IPR017850~KEGG: rmr:Rmar_1180 metalloenzyme domain protein~PFAM: metalloenzyme domain protein~SPTR: D0MHW2 Metalloenzyme domain protein~PFAM: Metalloenzyme superfamily gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1454 Trad_1455 Trad_1455 Trad_1455 1558260 1559375 - protein of unknown function DUF95 transmembrane InterPro IPR002798~KEGG: tth:TTC1379 hypothetical protein~PFAM: protein of unknown function DUF95 transmembrane~SPTR: C1XH99 Putative uncharacterized protein gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1455 Trad_1456 Trad_1456 Trad_1456 1559372 1559920 - orotate phosphoribosyltransferase COGs: COG0461 Orotate phosphoribosyltransferase~InterPro IPR000836:IPR006273~KEGG: ttj:TTHA1742 orotate phosphoribosyltransferase~PFAM: phosphoribosyltransferase~PRIAM: Orotate phosphoribosyltransferase~SPTR: C1XHA0 Orotate phosphoribosyltransferase~TIGRFAM: orotate phosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: orotate phosphoribosyltransferase%2C Thermus family gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1456 Trad_1457 Trad_1457 Trad_1457 1559968 1560693 + hypothetical protein KEGG: SNF2 superfamily protein~SPTR: A8I8T3 SNF2 superfamily protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1457 Trad_1458 Trad_1458 Trad_1458 1560751 1561902 - diguanylate phosphodiesterase COGs: COG2200 FOG: EAL domain~InterPro IPR001633~KEGG: tgr:Tgr7_0706 diguanylate phosphodiesterase~PFAM: EAL domain protein~SMART: EAL domain protein~SPTR: B8GMG6 Diguanylate phosphodiesterase~PFAM: EAL domain gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1458 Trad_1459 Trad_1459 Trad_1459 1562297 1563679 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)~InterPro IPR013027:IPR004099:IPR000815:IPR016156~KEGG: ade:Adeh_2206 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~SPTR: Q2IJZ8 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1459 Trad_1460 Trad_1460 Trad_1460 1563811 1565394 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG1251 NAD(P)H-nitrite reductase~InterPro IPR017941:IPR013027:IPR004099:IPR016156~KEGG: rmr:Rmar_0914 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Rieske [2Fe-2S] iron-sulphur domain~SPTR: D0MH23 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Rieske [2Fe-2S] domain gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1460 Trad_1461 Trad_1461 Trad_1461 1565644 1566159 + response regulator receiver protein KEGG: dge:Dgeo_1575 metal dependent phosphohydrolase~SPTR: C1XYF2 Putative uncharacterized protein~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1461 Trad_1462 Trad_1462 Trad_1462 1566146 1567447 + FolC bifunctional protein COGs: COG0285 Folylpolyglutamate synthase~InterPro IPR018109:IPR013221:IPR004101:IPR001645~KEGG: dge:Dgeo_0333 FolC bifunctional protein~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: Q1J1J8 FolC bifunctional protein~TIGRFAM: FolC bifunctional protein~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1462 Trad_1463 Trad_1463 Trad_1463 1567493 1568446 + dihydropteroate synthase COGs: COG0294 Dihydropteroate synthase~InterPro IPR000489:IPR006390:IPR011005~KEGG: dge:Dgeo_0396 dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS~PRIAM: Dihydropteroate synthase~SPTR: Q1J1D5 Dihydropteroate synthase~TIGRFAM: dihydropteroate synthase~PFAM: Pterin binding enzyme~TIGRFAM: dihydropteroate synthase gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1463 Trad_1464 Trad_1464 Trad_1464 1568448 1568801 + dihydroneopterin aldolase COGs: COG1539 Dihydroneopterin aldolase~InterPro IPR006157:IPR006156~KEGG: dra:DR_0169 dihydroneopterin aldolase~PFAM: dihydroneopterin aldolase~SPTR: Q9RXY5 Dihydroneopterin aldolase~TIGRFAM: dihydroneopterin aldolase~PFAM: Dihydroneopterin aldolase~TIGRFAM: dihydroneopterin aldolase%3B FolB domain gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1464 Trad_1465 Trad_1465 Trad_1465 1568788 1569321 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase~InterPro IPR000550~KEGG: cya:CYA_0019 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK~PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase~SPTR: Q2JY59 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase~PFAM: 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)~TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1465 Trad_1466 Trad_1466 Trad_1466 1569360 1570088 + metallophosphoesterase COGs: COG1768 phosphohydrolase~InterPro IPR014578:IPR004843~KEGG: ddr:Deide_12340 putative phosphohydrolase%2C metallophosphoesterase~PFAM: metallophosphoesterase~SPTR: C1CVD3 Putative phosphohydrolase%2C metallophosphoesterase~PFAM: Calcineurin-like phosphoesterase gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1466 Trad_1467 Trad_1467 Trad_1467 1570138 1570383 + hypothetical protein KEGG: mgm:Mmc1_2882 TP901 family phage tail tape measure protein~SPTR: A0LBN0 Phage tail tape measure protein%2C TP901 family gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1467 Trad_1468 Trad_1468 Trad_1468 1570495 1571430 - S-layer domain protein InterPro IPR001119~KEGG: dra:DR_2577 S-layer protein%2C putative~PFAM: S-layer domain protein~SPTR: Q9RRB6 S-layer protein%2C putative~PFAM: S-layer homology domain gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1468 Trad_1469 Trad_1469 Trad_1469 1571500 1571928 - Protein of unknown function DUF2203 COGs: COG4911 conserved hypothetical protein~InterPro IPR018699~KEGG: tth:TTC1760 hypothetical protein~PFAM: Protein of unknown function DUF2203~SPTR: B7A918 Putative uncharacterized protein~PFAM: Uncharacterized conserved protein (DUF2203) gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1469 Trad_1470 Trad_1470 Trad_1470 1572057 1573376 + AAA ATPase central domain protein COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase~InterPro IPR003959:IPR003593~KEGG: dge:Dgeo_1401 recombination factor protein RarA~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~SPTR: C1XSN7 Recombination protein MgsA~PFAM: MgsA AAA+ ATPase C terminal%3B ATPase family associated with various cellular activities (AAA) gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1470 Trad_1471 Trad_1471 Trad_1471 1573373 1574530 + acetate kinase COGs: COG0282 Acetate kinase~InterPro IPR000890:IPR004372~KEGG: saq:Sare_4073 acetate kinase~PFAM: acetate and butyrate kinase~SPTR: B4CX46 Cyclic nucleotide-binding protein~TIGRFAM: acetate kinase~PFAM: Acetokinase family~TIGRFAM: acetate kinase gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1471 Trad_1472 Trad_1472 Trad_1472 1574583 1575353 - polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR018211:IPR002509:IPR011330~KEGG: fal:FRAAL1353 hypothetical protein~PFAM: polysaccharide deacetylase~SPTR: Q0RR10 Putative uncharacterized protein~PFAM: Polysaccharide deacetylase gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1472 Trad_1473 Trad_1473 Trad_1473 1575387 1576382 - glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: sro:Sros_7656 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: C4EF41 Predicted glycosyltransferase~PFAM: Glycosyl transferase family 2 gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1473 Trad_1474 Trad_1474 Trad_1474 1576824 1577744 + ROK family protein COGs: COG1940 Transcriptional regulator/sugar kinase~InterPro IPR000600~KEGG: dge:Dgeo_0242 ROK domain-containing protein~PFAM: ROK family protein~SPTR: C1XV45 Glucokinase~PFAM: ROK family~TIGRFAM: ROK family protein (putative glucokinase) gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1474 Trad_1475 Trad_1475 Trad_1475 1577787 1578547 + pseudogene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1475 Trad_1476 Trad_1476 Trad_1476 1578570 1580627 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterProIPR000014:IPR000700:IPR001633:IPR003660:IPR 000160:IPR013655:IPR001610~KEGG: cyn:Cyan7425_3561 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B PAS fold-3 domain protein~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAC repeat-containing protein%3B PAS domain containing protein%3B histidine kinase HAMP region domain protein~SPTR: B8HRL5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1476 Trad_1477 Trad_1477 Trad_1477 1580694 1581164 - Polyketide cyclase/dehydrase InterPro IPR019587~KEGG: svi:Svir_11490 polyketide cyclase / dehydrase and lipid transport~PFAM: Polyketide cyclase/dehydrase~SPTR: C7MZT7 Polyketide cyclase / dehydrase and lipid transport~PFAM: Polyketide cyclase / dehydrase and lipid transport gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1477 Trad_1478 Trad_1478 Trad_1478 1581459 1582772 - Amidase COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~InterPro IPR000120~KEGG: scl:sce1497 putative amidase~PFAM: Amidase~SPTR: A9FCE4 Putative amidase~PFAM: Amidase gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1478 Trad_1479 Trad_1479 Trad_1479 1582901 1583308 + hypothetical protein KEGG: bcv:Bcav_2131 hypothetical protein~SPTR: C1XQG7 Putative uncharacterized protein gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1479 Trad_1480 Trad_1480 Trad_1480 1583480 1584061 + protoporphyrinogen oxidase COGs: COG4635 Flavodoxin~InterPro IPR001226:IPR008254~KEGG: hut:Huta_1035 protoporphyrinogen oxidase~SPTR: C7NVD4 Protoporphyrinogen oxidase gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1480 Trad_1481 Trad_1481 Trad_1481 1584058 1584930 - alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073~KEGG: krh:KRH_08630 putative hydrolase~PFAM: alpha/beta hydrolase fold~SPTR: C4RCJ2 Hydrolase/acyltransferase~PFAM: alpha/beta hydrolase fold gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1481 Trad_1482 Trad_1482 Trad_1482 1584953 1585954 - NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509:IPR016040~KEGG: kra:Krad_4240 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: D1BAT5 Nucleoside-diphosphate-sugar epimerase~PFAM: NAD dependent epimerase/dehydratase family gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1482 Trad_1483 Trad_1483 Trad_1483 1585974 1586807 - HAD-superfamily hydrolase%2C subfamily IIA COGs: COG0647 sugar phosphatase of the HAD superfamily~InterPro IPR005834:IPR006357~KEGG: chl:Chy400_2186 HAD-superfamily hydrolase%2C subfamily IIA~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: B9LGY4 HAD-superfamily hydrolase%2C subfamily IIA~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIA~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: HAD-superfamily subfamily IIA hydrolase%2C TIGR01457%3B phosphoglycolate/pyridoxal phosphate phosphatase family%3B Haloacid Dehalogenase Superfamily Class (subfamily) IIA gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1483 Trad_1484 Trad_1484 Trad_1484 1586976 1588031 + multiple sugar-binding periplasmic receptor ChvE precursor COGs: COG4213 ABC-type xylose transport system periplasmic component~KEGG: bbt:BBta_2137 multiple sugar-binding periplasmic receptor ChvE precursor~SPTR: A4BFC9 Sugar ABC transporter%2C periplasmic sugar-binding protein gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1484 Trad_1485 Trad_1485 Trad_1485 1588096 1589691 + ABC transporter related protein COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: lch:Lcho_3199 ABC transporter-related protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: B1Y140 ABC transporter-related protein~PFAM: ABC transporter gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1485 Trad_1486 Trad_1486 Trad_1486 1589705 1590901 + inner-membrane translocator COGs: COG4214 ABC-type xylose transport system permease component~InterPro IPR001851~KEGG: vap:Vapar_1047 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: C5CPH7 Inner-membrane translocator~PFAM: Branched-chain amino acid transport system / permease component gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1486 Trad_1487 Trad_1487 Trad_1487 1590953 1591999 + transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761:IPR010982~KEGG: cai:Caci_4997 transcriptional regulator%2C LacI family~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~SPTR: C7Q3C1 Transcriptional regulator%2C LacI family~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1487 Trad_1488 Trad_1488 Trad_1488 1592028 1592681 + class II aldolase/adducin family protein COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase~InterPro IPR001303~KEGG: sro:Sros_6218 L-ribulose-5-phosphate 4-epimerase~PFAM: class II aldolase/adducin family protein~SPTR: C4EH29 Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase~PFAM: Class II Aldolase and Adducin N-terminal domain~TIGRFAM: L-ribulose-5-phosphate 4-epimerase gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1488 Trad_1489 Trad_1489 Trad_1489 1592692 1594203 + L-arabinose isomerase COGs: COG2160 L-arabinose isomerase~InterPro IPR003762~KEGG: ote:Oter_1382 L-arabinose isomerase~PFAM: L-arabinose isomerase~PRIAM: L-arabinose isomerase~SPTR: B1ZRZ1 L-arabinose isomerase~PFAM: L-arabinose isomerase%3B L-arabinose isomerase C-terminal domain gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1489 Trad_1490 Trad_1490 Trad_1490 1594200 1595174 - hypothetical protein KEGG: hypothetical protein~SPTR: Q855E1 Gp69 gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1490 Trad_1491 Trad_1491 Trad_1491 1595254 1596780 - multi-sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterProIPR005467:IPR013656:IPR011712:IPR003594:IPR 000014:IPR003018:IPR004358~KEGG: rca:Rcas_4226 integral membrane sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerisation and phosphoacceptor region%3B PAS fold-4 domain protein~SMART: ATP-binding region ATPase domain protein%3B PAS domain containing protein%3B GAF domain protein~SPTR: C1XTQ5 PAS domain S-box protein~TIGRFAM: PAS sensor protein~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1491 Trad_1492 Trad_1492 Trad_1492 1596773 1597453 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032~KEGG: dra:DR_1558 DNA-binding response regulator~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~SPTR: C1XTQ6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1492 Trad_1493 Trad_1493 Trad_1493 1597519 1598433 - UspA domain protein InterPro IPR006016:IPR014729:IPR006015~KEGG: tth:TTC1692 universal stress protein~PFAM: UspA domain protein~SPTR: C1XRI9 Universal stress protein UspA-like protein~PFAM: Universal stress protein family gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1493 Trad_1494 Trad_1494 Trad_1494 1598758 1598964 + hypothetical protein KEGG: similar to tumor endothelial marker 8 isoform 1 precursor~SPTR: B6U4I2 Putative uncharacterized protein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1494 Trad_1495 Trad_1495 Trad_1495 1598966 1599997 + cytochrome c oxidase subunit II COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2~InterPro IPR002429:IPR009056:IPR003088:IPR008972~KEGG: rmr:Rmar_1565 cytochrome c oxidase subunit II~PFAM: cytochrome c oxidase subunit II%3B cytochrome c class I~SPTR: D0MIZ4 Cytochrome c oxidase subunit II~PFAM: Cytochrome C oxidase subunit II%2C periplasmic domain%3B Cytochrome c gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1495 Trad_1496 Trad_1496 Trad_1496 1600016 1601695 + cytochrome c oxidase subunit I COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1~InterPro IPR000883~KEGG: ttj:TTHA1135 ba3-type cytochrome c oxidase polypeptide I~PFAM: cytochrome c oxidase subunit I~SPTR: Q72JK2 Subunit II of C(O/B)3-type cytochrome c oxidase~PFAM: Cytochrome C and Quinol oxidase polypeptide I gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1496 Trad_1497 Trad_1497 Trad_1497 1601705 1602199 + hypothetical protein KEGG: ote:Oter_1536 hypothetical protein~SPTR: B1ZTN4 Putative uncharacterized protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1497 Trad_1498 Trad_1498 Trad_1498 1602209 1603207 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein COGs: COG1052 Lactate dehydrogenase and related dehydrogenase~InterPro IPR006140:IPR006139:IPR016040~KEGG: hoh:Hoch_1800 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~SPTR: D0LXZ3 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1498 Trad_1499 Trad_1499 Trad_1499 1603211 1604716 + L-lactate permease COGs: COG1620 L-lactate permease~InterPro IPR003804~KEGG: hoh:Hoch_2994 L-lactate permease~PFAM: L-lactate permease~SPTR: D0LQZ4 L-lactate permease~PFAM: L-lactate permease gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1499 Trad_1500 Trad_1500 Trad_1500 1604866 1605690 + Superoxide dismutase COGs: COG0605 Superoxide dismutase~InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189~KEGG: rmr:Rmar_0920 superoxide dismutase~PFAM: Manganese/iron superoxide dismutase-like~PRIAM: Superoxide dismutase~SPTR: D0MH29 Superoxide dismutase~PFAM: Iron/manganese superoxide dismutases%2C alpha-hairpin domain%3B Iron/manganese superoxide dismutases%2C C-terminal domain gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1500 Trad_1501 Trad_1501 Trad_1501 1605697 1605978 + Rhodanese domain protein InterPro IPR001763~KEGG: ttj:TTHA0839 phage shock protein E~SMART: Rhodanese domain protein~SPTR: C1XNW5 Rhodanese-related sulfurtransferase~PFAM: Rhodanese-like domain gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1501 Trad_1502 Trad_1502 Trad_1502 1606065 1606586 + OHCU decarboxylase COGs: COG3195 conserved hypothetical protein~InterPro IPR018020:IPR017580~KEGG: bgl:bglu_1g13130 chitooligosaccharide deacetylase~PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase~SPTR: C5AEZ4 Chitooligosaccharide deacetylase~TIGRFAM: OHCU decarboxylase~PFAM: OHCU decarboxylase~TIGRFAM: OHCU decarboxylase gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1502 Trad_1503 Trad_1503 Trad_1503 1606629 1607552 + urate oxidase COGs: COG3648 Uricase (urate oxidase)~InterPro IPR002042~KEGG: pjd:Pjdr2_3315 urate oxidase~PFAM: Uricase~PRIAM: Urate oxidase~SPTR: C6D261 Uricase~TIGRFAM: urate oxidase~PFAM: Uricase~TIGRFAM: urate oxidase gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1503 Trad_1504 Trad_1504 Trad_1504 1607555 1607908 + hydroxyisourate hydrolase COGs: COG2351 Transthyretin-like protein~InterPro IPR000895:IPR014306~KEGG: rpf:Rpic12D_1933 hydroxyisourate hydrolase~PFAM: Transthyretin~PRIAM: Hydroxyisourate hydrolase~SPTR: C1XF83 Transthyretin~TIGRFAM: hydroxyisourate hydrolase~PFAM: HIUase/Transthyretin family~TIGRFAM: hydroxyisourate hydrolase gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1504 Trad_1505 Trad_1505 Trad_1505 1607996 1609339 + allantoinase COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase~InterPro IPR002195:IPR006680:IPR017593:IPR011059~KEGG: dge:Dgeo_2609 allantoinase~PFAM: amidohydrolase~PRIAM: Allantoinase~SPTR: C1XTG9 Allantoinase~TIGRFAM: allantoinase~PFAM: Amidohydrolase family~TIGRFAM: allantoinase%3B dihydroorotase%2C multifunctional complex type gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1505 Trad_1506 Trad_1506 Trad_1506 1609336 1610142 + Cupin 2 conserved barrel domain protein COGs: COG3257 Uncharacterized protein possibly involved in glyoxylate utilization~InterPro IPR013096:IPR014710:IPR011051~KEGG: dge:Dgeo_2608 hypothetical protein~PFAM: Cupin 2 conserved barrel domain protein~SPTR: C1XTG8 Uncharacterized protein%2C possibly involved in glyoxylate utilization~PFAM: Cupin domain~TIGRFAM: putative allantoin catabolism protein gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1506 Trad_1507 Trad_1507 Trad_1507 1610142 1611389 + amidase%2C hydantoinase/carbamoylase family COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR010158:IPR002933:IPR011650~KEGG: sus:Acid_0364 amidase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~PRIAM: N-carbamoyl-L-amino-acid hydrolase~SPTR: C1XTG7 Amidase%2C hydantoinase/carbamoylase family~TIGRFAM: amidase%2C hydantoinase/carbamoylase family~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: amidase%2C hydantoinase/carbamoylase family gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1507 Trad_1508 Trad_1508 Trad_1508 1611386 1612105 - HNH endonuclease COGs: COG3183 restriction endonuclease~InterPro IPR002711~KEGG: dra:DR_1726 hypothetical protein~PFAM: HNH endonuclease~SPTR: O83027 Disrupted by IS8301 insertion~PFAM: HNH endonuclease gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1508 Trad_1509 Trad_1509 Trad_1509 1612216 1613181 - Bile acid:sodium symporter COGs: COG0798 Arsenite efflux pump ACR3 and related permease~InterPro IPR002657~KEGG: amt:Amet_1885 bile acid:sodium symporter~PFAM: Bile acid:sodium symporter~SPTR: A6TPD2 Bile acid:sodium symporter~PFAM: Sodium Bile acid symporter family gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1509 Trad_1510 Trad_1510 Trad_1510 1613242 1614591 + molybdopterin dehydrogenase FAD-binding protein COGs: COG4630 Xanthine dehydrogenase iron-sulfur cluster and FAD-binding subunit A~InterProIPR006058:IPR012175:IPR016166:IPR001041:IPR 002888:IPR002346:IPR005107:IPR012675:IPR016167:IPR016169~KEGG: dra:DR_A0177 xanthine dehydrogenase%2C N-terminal subunit~PFAM: molybdopterin dehydrogenase FAD-binding%3B [2Fe-2S]-binding domain protein%3B ferredoxin%3B CO dehydrogenase flavoprotein domain protein~SPTR: C1XTB0 Xanthine dehydrogenase%2C small subunit~PFAM: FAD binding domain in molybdopterin dehydrogenase%3B [2Fe-2S] binding domain%3B CO dehydrogenase flavoprotein C-terminal domain~TIGRFAM: xanthine dehydrogenase%2C small subunit gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1510 Trad_1511 Trad_1511 Trad_1511 1614588 1616927 + xanthine dehydrogenase%2C molybdopterin binding subunit COGs: COG4631 Xanthine dehydrogenase molybdopterin-binding subunit B~InterPro IPR000674:IPR008274:IPR014309~KEGG: dge:Dgeo_2604 xanthine dehydrogenase~PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding%3B aldehyde oxidase and xanthine dehydrogenase a/b hammerhead~PRIAM: Xanthine dehydrogenase~SPTR: C1XKI7 Xanthine dehydrogenase%2C molybdenum binding subunit apoprotein~TIGRFAM: xanthine dehydrogenase%2C molybdopterin binding subunit~PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase%3B Aldehyde oxidase and xanthine dehydrogenase%2C a/b hammerhead domain~TIGRFAM: xanthine dehydrogenase%2C molybdopterin binding subunit gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1511 Trad_1512 Trad_1512 Trad_1512 1616931 1617725 + xanthine dehydrogenase accessory protein XdhC COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family~InterPro IPR003777:IPR014308:IPR016040~KEGG: dge:Dgeo_2605 hypothetical protein~PFAM: protein of unknown function DUF182~SPTR: Q1J395 Xanthine dehydrogenase accessory factor XdhC~TIGRFAM: xanthine dehydrogenase accessory protein XdhC~PFAM: XdhC and CoxI family~TIGRFAM: xanthine dehydrogenase accessory protein XdhC gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1512 Trad_1513 Trad_1513 Trad_1513 1617728 1618576 + Methyltransferase type 11 COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase~InterPro IPR013216~KEGG: art:Arth_1026 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: A0JTQ0 Methyltransferase type 11~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1513 Trad_1514 Trad_1514 Trad_1514 1618665 1619612 - amidohydrolase 2 InterPro IPR006992~KEGG: sun:SUN_0878 5-oxoprolinase (ATP-hydrolysing)~PFAM: amidohydrolase 2~SPTR: A6Q8M7 5-oxoprolinase (ATP-hydrolysing)~PFAM: Amidohydrolase gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1514 Trad_1515 Trad_1515 Trad_1515 1619629 1620876 - PASTA domain containing protein COGs: COG2815 conserved hypothetical protein~InterPro IPR005543~KEGG: ccu:Ccur_03300 serine/threonine protein kinase~PFAM: PASTA domain containing protein~SMART: PASTA domain containing protein~SPTR: C0XTL0 Serine/threonine-protein kinase~PFAM: PASTA domain gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1515 Trad_1516 Trad_1516 Trad_1516 1620961 1621608 + conserved hypothetical protein KEGG: ddr:Deide_20360 hypothetical protein~SPTR: C1CYM2 Putative uncharacterized protein~PFAM: Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1516 Trad_1517 Trad_1517 Trad_1517 1621716 1622597 + transferase hexapeptide repeat containing protein COGs: COG0110 Acetyltransferase (isoleucine patch superfamily)~InterPro IPR001451:IPR011004~KEGG: ttj:TTHA0119 putative acetyltransferase~PFAM: transferase hexapeptide repeat containing protein~SPTR: B7ABZ7 Putative acetyltransferase gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1517 Trad_1518 Trad_1518 Trad_1518 1622599 1622811 - conserved hypothetical protein KEGG: chl:Chy400_3594 hypothetical protein~SPTR: B9LD75 Putative uncharacterized protein gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1518 Trad_1519 Trad_1519 Trad_1519 1623051 1623263 + hypothetical protein KEGG: hypothetical protein~SPTR: A9VAP9 Predicted protein gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1519 Trad_1520 Trad_1520 Trad_1520 1623270 1624208 + CHAD domain containing protein InterPro IPR007899~KEGG: psa:PST_2970 hypothetical protein~PFAM: CHAD domain containing protein~SPTR: A4VNR5 Putative uncharacterized protein~PFAM: CHAD domain gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1520 Trad_1521 Trad_1521 Trad_1521 1624347 1624646 + pseudogene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1521 Trad_1522 Trad_1522 Trad_1522 1624678 1625211 - Exonuclease RNase T and DNA polymerase III COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease~InterPro IPR013520:IPR006055:IPR012337~KEGG: hch:HCH_00401 putative exonuclease~PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~SPTR: Q2SPW2 Putative exonuclease~PFAM: Exonuclease gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1522 Trad_1523 Trad_1523 Trad_1523 1625455 1626924 + 6-phosphogluconate dehydrogenase%2C decarboxylating COGs: COG0362 6-phosphogluconate dehydrogenase~InterProIPR006184:IPR006115:IPR006114:IPR006113:IPR 016040:IPR013328:IPR012284:IPR006183:IPR008927~KEGG: hau:Haur_2625 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: 6-phosphogluconate dehydrogenase domain protein%3B 6-phosphogluconate dehydrogenase NAD-binding~SPTR: A9B0F4 6-phosphogluconate dehydrogenase%2C decarboxylating~TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: 6-phosphogluconate dehydrogenase%2C C-terminal domain%3B NAD binding domain of 6-phosphogluconate dehydrogenase~TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1523 Trad_1524 Trad_1524 Trad_1524 1626960 1629299 + diguanylate cyclase/phosphodiesterase with GAF sensor COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterPro IPR003018:IPR000160:IPR001633~KEGG: dal:Dalk_0942 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B GAF domain protein~SMART: EAL domain protein%3B GGDEF domain containing protein%3B GAF domain protein~SPTR: B8FI78 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)~TIGRFAM: diguanylate cyclase~PFAM: EAL domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1524 Trad_1525 Trad_1525 Trad_1525 1629304 1630656 - integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterProIPR004107:IPR002104:IPR011991:IPR013762:IPR 011010:IPR013324:IPR010998~KEGG: ddr:Deide_11500 putative integrase/recombinase~PFAM: integrase family protein%3B integrase domain protein SAM domain protein~SPTR: C1CV38 Putative integrase/recombinase~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1525 Trad_1526 Trad_1526 Trad_1526 1631442 1632206 + LamB/YcsF family protein COGs: COG1540 conserved hypothetical protein~InterPro IPR005501~KEGG: tth:TT_P0137 LamB/YcsF family protein~PFAM: LamB/YcsF family protein~SPTR: C1XIQ4 Uncharacterized lactam utilization protein B-like protein~PFAM: LamB/YcsF family gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1526 Trad_1527 Trad_1527 Trad_1527 1632215 1633738 + Allophanate hydrolase subunit 2 COGs: COG1984 Allophanate hydrolase subunit 2~InterPro IPR003833:IPR003778~KEGG: tth:TTC0624 UreA carboxylase/allophanate hydrolase~PFAM: Allophanate hydrolase subunit 2%3B Allophanate hydrolase subunit 1~SMART: Allophanate hydrolase subunit 2%3B Allophanate hydrolase subunit 1~SPTR: C1XT67 Putative uncharacterized protein~PFAM: Allophanate hydrolase subunit 2%3B Allophanate hydrolase subunit 1~TIGRFAM: conserved hypothetical protein TIGR00370%3B biotin-dependent carboxylase uncharacterized domain gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1527 Trad_1528 Trad_1528 Trad_1528 1633740 1634450 + hypothetical protein KEGG: dds:Ddes_0539 hypothetical protein~SPTR: B8J4J2 Putative uncharacterized protein gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1528 Trad_1529 Trad_1529 Trad_1529 1634617 1635870 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: tle:Tlet_0217 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: A8F3Q3 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1529 Trad_1530 Trad_1530 Trad_1530 1635874 1636800 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: ttr:Tter_2573 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: D1CI91 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1530 Trad_1531 Trad_1531 Trad_1531 1636800 1637675 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: tle:Tlet_0215 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A8F3Q1 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1531 Trad_1532 Trad_1532 Trad_1532 1637827 1638587 + pseudogene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1532 Trad_1533 Trad_1533 Trad_1533 1638772 1639812 - ABC transporter related protein COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterProIPR017871:IPR003439:IPR013611:IPR003593:IPR 008995~KEGG: mxa:MXAN_0772 iron ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~SPTR: Q09DS8 Iron(III)-transport ATP-binding protein SfuC~PFAM: ABC transporter%3B TOBE domain gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1533 Trad_1534 Trad_1534 Trad_1534 1640026 1641015 + extracellular solute-binding protein family 1 COGs: COG1840 ABC-type Fe3+ transport system periplasmic component~InterPro IPR006059~KEGG: rxy:Rxyl_1175 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: A4U8T5 Permease~PFAM: Bacterial extracellular solute-binding protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1534 Trad_1535 Trad_1535 Trad_1535 1641005 1641130 + hypothetical protein gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1535 Trad_1536 Trad_1536 Trad_1536 1641127 1642716 + binding-protein-dependent transport systems inner membrane component COGs: COG1178 ABC-type Fe3+ transport system permease component~InterPro IPR000515~KEGG: rxy:Rxyl_1174 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: D1C9W4 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1536 Trad_1537 Trad_1537 Trad_1537 1642725 1643141 - protein of unknown function DUF779 COGs: COG3564 conserved hypothetical protein~InterPro IPR008497~KEGG: nfa:nfa29960 hypothetical protein~PFAM: protein of unknown function DUF779~SPTR: Q5YVE8 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF779) gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1537 Trad_1538 Trad_1538 Trad_1538 1643233 1644753 - Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR016160:IPR015590:IPR016162:IPR016161~KEGG: xac:XAC0129 chloroacetaldehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: A6CTM5 NAD-dependent aldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase family gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1538 Trad_1539 Trad_1539 Trad_1539 1644887 1645909 - Alcohol dehydrogenase GroES domain protein COGs: COG1064 Zn-dependent alcohol dehydrogenase~InterProIPR002328:IPR013154:IPR013149:IPR011032:IPR 016040~KEGG: rme:Rmet_1093 alcohol dehydrogenase GroES-like protein~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: Q1LPE7 Alcohol dehydrogenase GroES-like protein~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1539 Trad_1540 Trad_1540 Trad_1540 1646230 1647783 + malate synthase A COGs: COG2225 Malate synthase~InterPro IPR019830:IPR011076:IPR015813:IPR006252~KEGG: tro:trd_0495 malate synthase A~PFAM: Malate synthase family protein~PRIAM: Malate synthase~SPTR: B9KYF0 Malate synthase~TIGRFAM: malate synthase A~PFAM: Malate synthase~TIGRFAM: malate synthase A gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1540 Trad_1541 Trad_1541 Trad_1541 1647847 1649133 + isocitrate lyase COGs: COG2224 Isocitrate lyase~InterPro IPR018523:IPR000918:IPR015813:IPR006254~KEGG: rca:Rcas_4375 isocitrate lyase~PFAM: isocitrate lyase and phosphorylmutase~SPTR: C1XZ89 Isocitrate lyase~TIGRFAM: isocitrate lyase~PFAM: Isocitrate lyase family~TIGRFAM: isocitrate lyase gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1541 Trad_1542 Trad_1542 Trad_1542 1649188 1652055 - Tetratricopeptide TPR_2 repeat protein InterPro IPR013105:IPR011990:IPR019734:IPR013026~KEGG: tth:TTC1486 hypothetical protein~PFAM: Tetratricopeptide TPR_2 repeat protein~SPTR: C1XZ90 TPR repeat-containing protein gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1542 Trad_1543 Trad_1543 Trad_1543 1652285 1652578 + conserved hypothetical protein KEGG: hypothetical protein~SPTR: C3ZX22 Putative uncharacterized protein gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1543 Trad_1544 Trad_1544 Trad_1544 1653074 1653676 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032~KEGG: mrd:Mrad2831_3042 two component LuxR family transcriptional regulator~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~SPTR: B1M5J4 Two component transcriptional regulator%2C LuxR family~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1544 Trad_1545 Trad_1545 Trad_1545 1653985 1654683 - biotin/acetyl-CoA-carboxylase ligase COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase~InterPro IPR004143:IPR004408~KEGG: rmr:Rmar_0108 biotin/acetyl-CoA-carboxylase ligase~PFAM: biotin/lipoate A/B protein ligase~SPTR: D0MCQ7 Biotin/acetyl-CoA-carboxylase ligase~TIGRFAM: biotin/acetyl-CoA-carboxylase ligase~PFAM: Biotin/lipoate A/B protein ligase family~TIGRFAM: birA%2C biotin-[acetyl-CoA-carboxylase] ligase region gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1545 Trad_1546 Trad_1546 Trad_1546 1654691 1658086 - SMC domain protein COGs: COG1196 Chromosome segregation ATPase~InterPro IPR003395:IPR010935:IPR009053~KEGG: dge:Dgeo_0822 SMC protein-like protein~PFAM: SMC domain protein%3B SMCs flexible hinge domain protein~SPTR: Q1J060 SMC protein~PFAM: RecF/RecN/SMC N terminal domain%3B SMC proteins Flexible Hinge Domain gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1546 Trad_1547 Trad_1547 Trad_1547 1658254 1659096 + Ig family protein InterPro IPR008009:IPR015919~KEGG: dra:DR_1407 hypothetical protein~PFAM: Ig family protein~SPTR: Q9RUH9 Putative uncharacterized protein~PFAM: Putative Ig domain gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1547 Trad_1548 Trad_1548 Trad_1548 1659093 1659671 + hypothetical protein KEGG: dra:DR_1406 hypothetical protein~SPTR: Q9RUI0 Putative uncharacterized protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1548 Trad_1549 Trad_1549 Trad_1549 1659668 1660489 + hypothetical protein InterPro IPR018247:IPR016134~KEGG: dge:Dgeo_1646 hypothetical protein~SPTR: A3TYC1 Putative cytoplasmic protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1549 Trad_1550 Trad_1550 Trad_1550 1660658 1661017 + hypothetical protein KEGG: rfr:Rfer_2233 hypothetical protein~SPTR: Q21W98 Putative uncharacterized protein gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1550 Trad_1551 Trad_1551 Trad_1551 1661143 1661589 + conserved hypothetical protein KEGG: dra:DR_1021 hypothetical protein~SPTR: Q9RVK6 Putative uncharacterized protein gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1551 Trad_1552 Trad_1552 Trad_1552 1661586 1662716 + SCP-like extracellular COGs: COG2340 Uncharacterized protein with SCP/PR1 domains~InterPro IPR014044~KEGG: fra:Francci3_3457 allergen V5/TPX-1 related~PFAM: SCP-like extracellular~SPTR: Q2J7D1 Allergen V5/Tpx-1 related~PFAM: Cysteine-rich secretory protein family gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1552 Trad_1553 Trad_1553 Trad_1553 1662720 1664147 - amidophosphoribosyltransferase COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase~InterPro IPR000583:IPR000836:IPR005854:IPR017932~KEGG: dra:DR_0220 amidophosphoribosyltransferase~PFAM: glutamine amidotransferase class-II%3B phosphoribosyltransferase~SPTR: C1XI26 Amidophosphoribosyltransferase~TIGRFAM: amidophosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain%3B Glutamine amidotransferases class-II~TIGRFAM: amidophosphoribosyltransferase gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1553 Trad_1554 Trad_1554 Trad_1554 1664144 1666396 - phosphoribosylformylglycinamidine synthase II COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain~InterPro IPR000728:IPR010918:IPR016188:IPR010074~KEGG: dge:Dgeo_0064 phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine synthase~SPTR: Q1J2B7 Phosphoribosylformylglycinamidine synthase II~TIGRFAM: phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylformylglycinamidine synthase II gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1554 Trad_1555 Trad_1555 Trad_1555 1666393 1667187 - phosphoribosylformylglycinamidine synthase I COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain~InterPro IPR011698:IPR010075:IPR017926~KEGG: rmr:Rmar_2306 phosphoribosylformylglycinamidine synthase I~PFAM: CobB/CobQ domain protein glutamine amidotransferase~PRIAM: Phosphoribosylformylglycinamidine synthase~SPTR: C1XI29 Phosphoribosylformylglycinamidine synthase subunit I~TIGRFAM: phosphoribosylformylglycinamidine synthase I~PFAM: CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: phosphoribosylformylglycinamidine synthase I gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1555 Trad_1556 Trad_1556 Trad_1556 1667526 1668851 + Glycine C-acetyltransferase COGs: COG0156 7-keto-8-aminopelargonate synthetase~InterPro IPR001917:IPR004839:IPR015421:IPR015424~KEGG: tye:THEYE_A0594 serine hydroxymethyltransferase~PFAM: aminotransferase class I and II~PRIAM: Glycine C-acetyltransferase~SPTR: B5YJM2 Serine hydroxymethyltransferase~PFAM: Aminotransferase class I and II~TIGRFAM: 8-amino-7-oxononanoate synthase gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1556 Trad_1557 Trad_1557 Trad_1557 1668976 1670079 + conserved hypothetical protein InterPro IPR016181:IPR000182~KEGG: mxa:MXAN_3747 hypothetical protein~SPTR: Q1D5Z4 Putative uncharacterized protein gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1557 Trad_1558 Trad_1558 Trad_1558 1670118 1670846 + Abortive infection protein InterPro IPR003675~KEGG: scl:sce5305 hypothetical protein~PFAM: Abortive infection protein~SPTR: A1ZUR8 Caax amino terminal protease family~PFAM: CAAX amino terminal protease family gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1558 Trad_1559 Trad_1559 Trad_1559 1670854 1671858 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509:IPR016040~KEGG: sco:SCO5893 oxidoreductase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: O54156 Oxidoreductase~PFAM: NAD dependent epimerase/dehydratase family gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1559 Trad_1560 Trad_1560 Trad_1560 1671855 1673006 + Glycosyltransferase 28 domain protein COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~InterPro IPR007235~KEGG: rca:Rcas_2994 monogalactosyldiacylglycerol synthase~PFAM: Glycosyltransferase 28 domain~SPTR: A7NNB8 Monogalactosyldiacylglycerol synthase~PFAM: Glycosyltransferase family 28 C-terminal domain gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1560 Trad_1561 Trad_1561 Trad_1561 1673075 1674184 + UDP-galactopyranose mutase COGs: COG0562 UDP-galactopyranose mutase~InterPro IPR000172:IPR015899:IPR016040:IPR004379~KEGG: dra:DR_A0367 UDP-galactopyranose mutase~PFAM: UDP-galactopyranose mutase-like%3B glucose-methanol-choline oxidoreductase~PRIAM: UDP-galactopyranose mutase~SPTR: Q9RYF1 UDP-galactopyranose mutase~TIGRFAM: UDP-galactopyranose mutase~PFAM: UDP-galactopyranose mutase~TIGRFAM: UDP-galactopyranose mutase gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1561 Trad_1562 Trad_1562 Trad_1562 1674242 1675309 + conserved hypothetical protein InterPro IPR005242~KEGG: rmr:Rmar_1933 hypothetical protein~SPTR: C0GGD5 Putative uncharacterized protein~PFAM: Uncharacterised protein family (UPF0104)~TIGRFAM: conserved hypothetical protein gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1562 Trad_1563 Trad_1563 Trad_1563 1675380 1676891 + transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000792:IPR013655:IPR013656:IPR011991:IPR 000014:IPR001610:IPR016032:IPR000700~KEGG: mno:Mnod_6717 transcriptional regulator%2C LuxR family~PFAM: regulatory protein LuxR%3B PAS fold-3 domain protein%3B PAS fold-4 domain protein~SMART: regulatory protein LuxR%3B PAC repeat-containing protein%3B PAS domain containing protein~SPTR: B8IEY5 Transcriptional regulator%2C LuxR family~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory proteins%2C luxR family%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1563 Trad_1564 Trad_1564 Trad_1564 1676901 1677863 - glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: cac:CAC2171 glycosyltransferase~PFAM: glycosyl transferase family 2~SPTR: Q97H42 Predicted glycosyltransferase~PFAM: Glycosyl transferase family 2 gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1564 Trad_1565 Trad_1565 Trad_1565 1677939 1680533 + protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: rxy:Rxyl_0847 hypothetical protein~PFAM: protein of unknown function DUF214~SPTR: Q1AXR4 Putative uncharacterized protein~PFAM: Predicted permease gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1565 Trad_1566 Trad_1566 Trad_1566 1680599 1681390 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: sma:SAV_7085 ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1RIK7 ABC-type antimicrobial peptide transport system%2C ATPase component (Fragment)~PFAM: ABC transporter gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1566 Trad_1567 Trad_1567 Trad_1567 1681517 1683778 + conserved hypothetical protein%2C precursor%3B putative membrane protein COGs: COG2409 drug exporter of the RND superfamily~InterPro IPR000731~KEGG: ddr:Deide_21640 conserved hypothetical protein%2C precursor%3B putative membrane protein~SPTR: C1CZE2 Putative uncharacterized protein~PFAM: MMPL family~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1567 Trad_1568 Trad_1568 Trad_1568 1683938 1685347 + D-lactate dehydrogenase (cytochrome) COGs: COG0277 FAD/FMN-containing dehydrogenase~InterProIPR001412:IPR006094:IPR004113:IPR016167:IPR 016168:IPR016166:IPR016164~KEGG: tth:TTC0129 (S)-2-hydroxy-acid oxidase chain D~PFAM: FAD linked oxidase domain protein~PRIAM: D-lactate dehydrogenase (cytochrome)~SPTR: C1XVX2 FAD/FMN-dependent dehydrogenase~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain~TIGRFAM: glycolate oxidase%2C subunit GlcD gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1568 Trad_1569 Trad_1569 Trad_1569 1685344 1686513 + FAD linked oxidase domain protein COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR006094:IPR016168:IPR016166~KEGG: ttj:TTHA0504 glycolate oxidase subunit GlcE~PFAM: FAD linked oxidase domain protein~SPTR: C1XGR9 FAD/FMN-dependent dehydrogenase~PFAM: FAD binding domain gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1569 Trad_1570 Trad_1570 Trad_1570 1686503 1687762 + protein of unknown function DUF224 cysteine-rich region domain protein COGs: COG0247 Fe-S oxidoreductase~InterProIPR017900:IPR001450:IPR004017:IPR012285:IPR 009051:IPR017896:IPR012257~KEGG: ddr:Deide_14060 putative glycolate oxidase iron-sulfur subunit~PFAM: protein of unknown function DUF224 cysteine-rich region domain protein%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: C1XVX4 Fe-S oxidoreductase~PFAM: Cysteine-rich domain gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1570 Trad_1571 Trad_1571 Trad_1571 1687846 1688637 - binding-protein-dependent transport systems inner membrane component COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component~InterPro IPR000515~KEGG: dra:DR_A0138 amino acid ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q9RZ15 Amino acid ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1571 Trad_1572 Trad_1572 Trad_1572 1688634 1689791 - glycine betaine/L-proline ABC transporter%2C ATPase subunit COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components~InterProIPR017871:IPR003439:IPR000644:IPR003593:IPR 005892~KEGG: vei:Veis_2913 glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B CBS domain containing protein~SMART: AAA ATPase~SPTR: B1FXW8 Glycine betaine/L-proline ABC transporter%2C ATPase subunit~TIGRFAM: glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B CBS domain~TIGRFAM: glycine betaine/L-proline transport ATP binding subunit gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1572 Trad_1573 Trad_1573 Trad_1573 1689833 1691230 - binding-protein-dependent transport systems inner membrane component COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component~InterPro IPR000515~KEGG: dra:DR_A0136 amino acid ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XSG6 ABC-type proline/glycine betaine transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1573 Trad_1574 Trad_1574 Trad_1574 1691439 1692347 - Substrate-binding region of ABC-type glycine betaine transport system COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)~InterPro IPR007210~KEGG: dra:DR_A0135 ABC transporter%2C periplasmic substrate-binding protein%2C putative~PFAM: Substrate-binding region of ABC-type glycine betaine transport system~SPTR: C1XSG5 Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transport system (Osmoprotectant binding protein)~PFAM: Substrate binding domain of ABC-type glycine betaine transport system gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1574 Trad_1575 Trad_1575 Trad_1575 1692604 1693416 + Enoyl-CoA hydratase/isomerase COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase~InterPro IPR001753~KEGG: tth:TTC0182 enoyl-CoA hydratase~PFAM: Enoyl-CoA hydratase/isomerase~SPTR: C1XXV0 Enoyl-CoA hydratase/carnithine racemase~PFAM: Enoyl-CoA hydratase/isomerase family gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1575 Trad_1576 Trad_1576 Trad_1576 1693490 1694545 + D-alanine/D-alanine ligase COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein~InterProIPR000291:IPR011127:IPR011095:IPR013817:IPR 013816:IPR016185:IPR005905:IPR011761~KEGG: dge:Dgeo_2121 D-alanyl-alanine synthetase A~PFAM: D-alanine--D-alanine ligase domain protein~PRIAM: D-alanine--D-alanine ligase~SPTR: Q1IWG9 D-alanine--D-alanine ligase~TIGRFAM: D-alanine/D-alanine ligase~PFAM: D-ala D-ala ligase C-terminus%3B D-ala D-ala ligase N-terminus~TIGRFAM: D-alanine--D-alanine ligase gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1576 Trad_1577 Trad_1577 Trad_1577 1694789 1695286 + HNH endonuclease COGs: COG1403 Restriction endonuclease~InterPro IPR002711:IPR003615~KEGG: dge:Dgeo_2144 HNH endonuclease~PFAM: HNH endonuclease~SMART: HNH nuclease~SPTR: Q1IWE6 HNH endonuclease~PFAM: HNH endonuclease gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1577 Trad_1578 Trad_1578 Trad_1578 1695363 1695707 + hypothetical protein KEGG: sus:Acid_6160 allergen V5/TPX-1 family protein~SPTR: Q01TD4 Allergen V5/Tpx-1 family protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1578 Trad_1579 Trad_1579 Trad_1579 1695756 1696190 + Camphor resistance CrcB protein COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation~InterPro IPR003691~KEGG: kra:Krad_0191 camphor resistance CrcB protein~PFAM: Camphor resistance CrcB protein~SPTR: A6W4E3 Protein crcB homolog~PFAM: CrcB-like protein~TIGRFAM: crcB protein gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1579 Trad_1580 Trad_1580 Trad_1580 1696187 1696588 + Camphor resistance CrcB protein COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation~InterPro IPR003691~KEGG: cai:Caci_7364 CrcB protein~PFAM: Camphor resistance CrcB protein~SPTR: C7Q9M2 Protein crcB homolog~PFAM: CrcB-like protein~TIGRFAM: crcB protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1580 Trad_1581 Trad_1581 Trad_1581 1696875 1698542 + sodium/hydrogen exchanger COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter~InterPro IPR006015:IPR006153:IPR006016:IPR014729~KEGG: ana:alr2264 Na+/H+-exchanging protein~PFAM: sodium/hydrogen exchanger%3B UspA domain protein~SPTR: A0ZCU5 Sodium/hydrogen exchanger~PFAM: Universal stress protein family%3B Sodium/hydrogen exchanger family gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1581 Trad_1582 Trad_1582 Trad_1582 1698675 1700660 + heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterProIPR001757:IPR001969:IPR000150:IPR008250:IPR 005834:IPR006404:IPR006416~KEGG: dge:Dgeo_2752 heavy metal translocating P-type ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: Q1J2U9 Heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B cadmium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1582 Trad_1583 Trad_1583 Trad_1583 1700670 1701056 + transcriptional regulator%2C ArsR family InterPro IPR001845:IPR018334:IPR011991~KEGG: dra:DR_A0071 transcriptional repressor SmtB~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: Q9RZ83 Transcriptional repressor SmtB~PFAM: Bacterial regulatory protein%2C arsR family gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1583 Trad_1584 Trad_1584 Trad_1584 1701093 1701632 - FHA domain containing protein KEGG: xce:Xcel_0488 FHA domain containing protein~SPTR: Q08Y94 Putative prolin-rich exported protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1584 Trad_1585 Trad_1585 Trad_1585 1701629 1703050 - hypothetical protein KEGG: dge:Dgeo_0508 hypothetical protein~SPTR: Q1J124 Putative uncharacterized protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1585 Trad_1586 Trad_1586 Trad_1586 1703076 1703507 - SsrA-binding protein COGs: COG0691 tmRNA-binding protein~InterPro IPR020081:IPR000037~KEGG: ddr:Deide_08770 putative SsrA-binding protein~PFAM: SmpB protein~SPTR: C1D1M8 Putative SsrA-binding protein~TIGRFAM: SsrA-binding protein~PFAM: SmpB protein~TIGRFAM: SsrA-binding protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1586 Trad_1587 Trad_1587 Trad_1587 1703859 1706153 - primosomal protein N' COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase~InterPro IPR005259~KEGG: ddr:Deide_00480 putative primosomal protein N (ATP-dependent helicase PriA) (replication factor Y)~SPTR: C1CXP0 Putative primosomal protein N (ATP-dependent helicase priA) (Replication factor Y)~TIGRFAM: primosomal protein N'~TIGRFAM: primosomal protein N' gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1587 Trad_1588 Trad_1588 Trad_1588 1706208 1707263 + phosphoribosylformylglycinamidine cyclo-ligase COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase~InterPro IPR000728:IPR010918:IPR016188:IPR004733~KEGG: ttj:TTHA0367 phosphoribosylaminoimidazole synthetase~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase~SPTR: C1XFN2 Phosphoribosylformylglycinamidine cyclo-ligase~TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylaminoimidazole synthetase gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1588 Trad_1589 Trad_1589 Trad_1589 1707260 1708825 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR004358:IPR003660:IPR003661:IPR003594:IPR 009082:IPR005467~KEGG: ddr:Deide_01480 putative histidine kinase%2C classic%3B putative membrane protein~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SPTR: C1CYD6 Sensor protein~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain~TIGRFAM: heavy metal sensor kinase gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1589 Trad_1590 Trad_1590 Trad_1590 1709022 1709699 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR005829:IPR001789:IPR001867:IPR011006~KEGG: ddr:Deide_01470 putative response regulator%2C CheY~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: Q9RWC6 Response regulator~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1590 Trad_1591 Trad_1591 Trad_1591 1709809 1710339 - quorum-sensing autoinducer 2 (AI-2)%2C LuxS COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis~InterPro IPR003815:IPR011249~KEGG: ttj:TTHA1551 S-ribosylhomocysteinase~PFAM: LuxS protein~PRIAM: S-ribosylhomocysteine lyase~SPTR: Q5SI29 S-ribosylhomocysteine lyase~PFAM: S-Ribosylhomocysteinase (LuxS) gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1591 Trad_1592 Trad_1592 Trad_1592 1710552 1710845 + hypothetical protein KEGG: GH23275 gene product from transcript GH23275-RA~SPTR: B4K1Y4 GH23275 gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1592 Trad_1593 Trad_1593 Trad_1593 1710855 1711520 + Domain of unknown function DUF2382 InterPro IPR019060~KEGG: mdi:METDI4796 hypothetical protein~PFAM: Domain of unknown function DUF2382-like~SPTR: C4CYH7 Uncharacterized conserved protein~PFAM: Domain of unknown function (DUF2382)~TIGRFAM: conserved domain gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1593 Trad_1594 Trad_1594 Trad_1594 1711684 1712676 + Domain of unknown function DUF2382 InterPro IPR019060~KEGG: sus:Acid_7532 hypothetical protein~PFAM: Domain of unknown function DUF2382-like~SPTR: Q01PI0 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF2382)~TIGRFAM: conserved domain gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1594 Trad_1595 Trad_1595 Trad_1595 1712858 1713379 + protein of unknown function DUF88 COGs: COG1432 conserved hypothetical protein~InterPro IPR002790~KEGG: ttj:TTHA0189 hypothetical protein~PFAM: protein of unknown function DUF88~SPTR: Q72GQ1 Hypothetical conserved protein~PFAM: Protein of unknown function DUF88 gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1595 Trad_1596 Trad_1596 Trad_1596 1713502 1715547 - DNA ligase%2C NAD-dependent COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)~InterProIPR018239:IPR013839:IPR004150:IPR004149:IPR 000445:IPR001357:IPR012340:IPR013840:IPR003583:IPR010994:I PR016027:IPR001679~KEGG: tth:TTC0732 NAD-dependent DNA ligase~PFAM: NAD-dependent DNA ligase adenylation%3B NAD-dependent DNA ligase OB-fold%3B zinc-finger NAD-dependent DNA ligase C4-type%3B helix-hairpin-helix motif%3B BRCT domain protein~PRIAM: DNA ligase (NAD(+))~SMART: NAD-dependent DNA ligase %3B Helix-hairpin-helix DNA-binding class 1%3B BRCT domain protein~SPTR: Q72JN8 DNA ligase~TIGRFAM: DNA ligase%2C NAD-dependent~PFAM: NAD-dependent DNA ligase OB-fold domain%3B NAD-dependent DNA ligase adenylation domain%3B NAD-dependent DNA ligase C4 zinc finger domain%3B BRCA1 C Terminus (BRCT) domain~TIGRFAM: DNA ligase%2C NAD-dependent gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1596 Trad_1597 Trad_1597 Trad_1597 1715654 1716772 + basic membrane lipoprotein COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein~InterPro IPR003760~KEGG: tth:TTC0733 membrane lipoprotein~PFAM: basic membrane lipoprotein~SPTR: Q72JN7 Membrane lipoprotein~PFAM: Basic membrane protein gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1597 Trad_1598 Trad_1598 Trad_1598 1717926 1718354 + MraZ protein COGs: COG2001 conserved hypothetical protein~InterPro IPR020603:IPR003444~KEGG: ddr:Deide_08661 putative MraZ protein~PFAM: MraZ domain~SPTR: C1D1L7 Protein mraZ~TIGRFAM: MraZ protein~PFAM: MraZ protein~TIGRFAM: mraZ protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1598 Trad_1599 Trad_1599 Trad_1599 1718351 1719370 + S-adenosyl-methyltransferase MraW COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis~InterPro IPR002903~KEGG: dge:Dgeo_0766 methyltransferase~PFAM: methyltransferase~SPTR: Q1J0B6 S-adenosyl-L-methionine-dependent methyltransferase mraW~TIGRFAM: S-adenosyl-methyltransferase MraW~PFAM: MraW methylase family~TIGRFAM: S-adenosyl-methyltransferase MraW gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1599 Trad_1600 Trad_1600 Trad_1600 1719367 1719687 + hypothetical protein KEGG: ttj:TTHA1077 hypothetical protein~SPTR: C1XIY3 Putative uncharacterized protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1600 Trad_1601 Trad_1601 Trad_1601 1719678 1721270 + Peptidoglycan glycosyltransferase COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR001460:IPR012338:IPR005311~KEGG: ddr:Deide_08690 putative peptidoglycan glycosyltransferase%2C precursor~PFAM: penicillin-binding protein transpeptidase~PRIAM: Peptidoglycan glycosyltransferase~SPTR: C1D1M0 Putative Peptidoglycan glycosyltransferase%2C~PFAM: Penicillin binding protein transpeptidase domain gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1601 Trad_1602 Trad_1602 Trad_1602 1721339 1722718 + UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate/D-alanyl-D-alanyl ligase COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase~InterProIPR000408:IPR000713:IPR013221:IPR004101:IPR 005863~KEGG: ddr:Deide_17590 putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase)~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: C1CX15 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase~TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-d iaminopimelate/D-alanyl-D-alanylligase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1602 Trad_1603 Trad_1603 Trad_1603 1722715 1723737 + Glycosyl transferase%2C family 4%2C conserved region COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase~InterPro IPR018480:IPR018481~KEGG: ddr:Deide_14680 putative phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase)~PFAM: Glycosyl transferase%2C family 4%2C conserved region%3B Phospho-N-acetylmuramoyl-pentapeptide transferase%2C conserved site~SPTR: C1XIX9 Phospho-N-acetylmuramoyl-pentapeptide-transferase~PFAM: Glycosyl transferase family 4~TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1603 Trad_1604 Trad_1604 Trad_1604 1723734 1725086 + UDP-N-acetylmuramoylalanine/D-glutamate ligase COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase~InterPro IPR013221:IPR004101:IPR016040:IPR005762~KEGG: ttj:TTHA1082 UDP-N-acetylmuramoylalanine--D-glutamiate ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: Q5SJD2 UDP-N-acetylmuramoylalanine--D-glutamate ligase~TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase~PFAM: Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1604 Trad_1605 Trad_1605 Trad_1605 1725056 1726135 + cell cycle protein COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182~KEGG: tth:TTC0718 cell cycle protein FtsW~PFAM: cell cycle protein~SPTR: Q72JQ0 Cell division protein%2C ftsW/rodA/spove family~PFAM: Cell cycle protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1605 Trad_1606 Trad_1606 Trad_1606 1726132 1727274 + UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~InterPro IPR004276:IPR007235:IPR006009~KEGG: dge:Dgeo_1630 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~PFAM: glycosyl transferase family 28%3B Glycosyltransferase 28 domain~PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~SPTR: Q1IXV9 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~PFAM: Glycosyltransferase family 28 N-terminal domain%3B Glycosyltransferase family 28 C-terminal domain~TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1606 Trad_1607 Trad_1607 Trad_1607 1727271 1728650 + UDP-N-acetylmuramate/alanine ligase COGs: COG0773 UDP-N-acetylmuramate-alanine ligase~InterProIPR000713:IPR013221:IPR004101:IPR016040:IPR 005758~KEGG: ddr:Deide_14560 putative UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase)~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~SPTR: C1CW41 Putative UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase)~TIGRFAM: UDP-N-acetylmuramate/alanine ligase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramate--alanine ligase gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1607 Trad_1608 Trad_1608 Trad_1608 1728637 1729506 + UDP-N-acetylenolpyruvoylglucosamine reductase COGs: COG0812 UDP-N-acetylmuramate dehydrogenase~InterProIPR006094:IPR011601:IPR016167:IPR016169:IPR 016166:IPR003170~KEGG: ttj:TTHA1086 UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein%3B FAD linked oxidase domain protein~PRIAM: UDP-N-acetylmuramate dehydrogenase~SPTR: C1XIX4 UDP-N-acetylmuramate dehydrogenase~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: FAD binding domain%3B UDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal domain~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1608 Trad_1609 Trad_1609 Trad_1609 1729491 1730081 + Polypeptide-transport-associated domain protein FtsQ-type COGs: COG1589 Cell division septal protein~InterPro IPR013685~KEGG: dge:Dgeo_1633 cell division protein FtsQ~PFAM: Polypeptide-transport-associated domain protein FtsQ-type~SPTR: Q1IXV6 Cell division protein FtsQ~PFAM: POTRA domain%2C FtsQ-type gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1609 Trad_1610 Trad_1610 Trad_1610 1730134 1731387 + cell division protein FtsA COGs: COG0849 Actin-like ATPase involved in cell division~InterPro IPR003494:IPR020823~KEGG: dge:Dgeo_1634 cell division protein FtsA~PFAM: cell division protein FtsA~SPTR: C1XU92 Cell division protein FtsA~TIGRFAM: cell division protein FtsA~PFAM: Cell division protein FtsA~TIGRFAM: cell division protein FtsA gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1610 Trad_1611 Trad_1611 Trad_1611 1731426 1732493 + cell division protein FtsZ COGs: COG0206 Cell division GTPase~InterProIPR000158:IPR020805:IPR003008:IPR018316:IPR 019746:IPR008280~KEGG: ttj:TTHA1089 cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ%2C 2-layer sandwich domain~SPTR: Q72JP4 Cell division protein ftsZ~TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ family%2C GTPase domain%3B FtsZ family%2C C-terminal domain~TIGRFAM: cell division protein FtsZ gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1611 Trad_1612 Trad_1612 Trad_1612 1732542 1733060 + NUDIX hydrolase InterPro IPR020476:IPR020084:IPR000086:IPR015797~KEGG: ttj:TTHA0528 ADP-ribose pyrophosphatase~PFAM: NUDIX hydrolase~SPTR: B7A6K2 NUDIX hydrolase~PFAM: NUDIX domain gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1612 Trad_1613 Trad_1613 Trad_1613 1733057 1734022 + riboflavin biosynthesis protein RibF COGs: COG0196 FAD synthase~InterProIPR015864:IPR015865:IPR014729:IPR004821:IPR 002606~KEGG: dge:Dgeo_1809 riboflavin biosynthesis protein RibF~PFAM: Riboflavin kinase%3B FAD synthetase~SPTR: C1XUB0 FMN adenylyltransferase%3B riboflavin kinase~TIGRFAM: riboflavin biosynthesis protein RibF%3B cytidyltransferase-related domain protein~PFAM: Riboflavin kinase%3B FAD synthetase~TIGRFAM: riboflavin kinase/FMN adenylyltransferase%3B cytidyltransferase-related domain gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1613 Trad_1614 Trad_1614 Trad_1614 1734204 1734929 + RNA methyltransferase%2C TrmH family%2C group 3 COGs: COG0566 rRNA methylase~InterPro IPR013123:IPR001537:IPR004441~KEGG: dra:DR_0748 RNA methyltransferase~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~SPTR: C1XNJ3 rRNA methylase%2C putative%2C group 3~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: SpoU rRNA Methylase family%3B RNA 2'-O ribose methyltransferase substrate binding~TIGRFAM: rRNA methylase%2C putative%2C group 3 gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1614 Trad_1615 Trad_1615 Trad_1615 1734981 1736981 + peptidase S9 prolyl oligopeptidase active site domain protein COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase~InterPro IPR001375:IPR011042~KEGG: bsu:BSU32230 putative acylaminoacyl-peptidase~PFAM: peptidase S9 prolyl oligopeptidase active site domain protein~SPTR: P39839 Uncharacterized peptidase yuxL~PFAM: Prolyl oligopeptidase family%3B WD40-like Beta Propeller Repeat gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1615 Trad_1616 Trad_1616 Trad_1616 1737072 1738319 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: amr:AM1_4833 glycosyl transferase%2C group 1 family protein~PFAM: glycosyl transferase group 1~SPTR: C7IU55 Glycosyl transferase group 1~PFAM: Glycosyl transferases group 1 gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1616 Trad_1617 Trad_1617 Trad_1617 1738327 1739100 + hypothetical protein KEGG: pfl:PFL_0528 hypothetical protein~SPTR: C6MHR3 Putative uncharacterized protein~PFAM: Sulfotransferase family gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1617 Trad_1618 Trad_1618 Trad_1618 1739097 1739540 - protein of unknown function UPF0047 COGs: COG0432 conserved hypothetical protein~InterPro IPR001602~KEGG: rmr:Rmar_1889 protein of unknown function UPF0047~PFAM: protein of unknown function UPF0047~SPTR: D0MJW4 Putative uncharacterized protein~PFAM: Uncharacterised protein family UPF0047~TIGRFAM: conserved hypothetical protein TIGR00149 gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1618 Trad_1619 Trad_1619 Trad_1619 1739572 1740492 - pantothenate kinase COGs: COG1072 Panthothenate kinase~InterPro IPR004566~KEGG: aac:Aaci_2275 pantothenate kinase~SPTR: B7DSG7 Pantothenate kinase~TIGRFAM: pantothenate kinase~PFAM: Phosphoribulokinase / Uridine kinase family~TIGRFAM: pantothenate kinase%2C bacterial type gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1619 Trad_1620 Trad_1620 Trad_1620 1741002 1741874 - aminoglycoside phosphotransferase InterPro IPR002575:IPR011009~KEGG: sco:SCP1.305 hypothetical protein~PFAM: aminoglycoside phosphotransferase~SPTR: B4UZY3 Putative uncharacterized protein~PFAM: Phosphotransferase enzyme family gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1620 Trad_1621 Trad_1621 Trad_1621 1742072 1742341 + ribosomal protein S15 COGs: COG0184 Ribosomal protein S15P/S13E~InterPro IPR000589:IPR009068:IPR005290~KEGG: cpy:Cphy_2767 ribosomal protein S15~PFAM: ribosomal protein S15~SPTR: C1XQT3 30S ribosomal protein S15~TIGRFAM: ribosomal protein S15~PFAM: Ribosomal protein S15~TIGRFAM: ribosomal protein S15%2C bacterial/organelle gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1621 Trad_1622 Trad_1622 Trad_1622 1742612 1744792 + polyribonucleotide nucleotidyltransferase COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)~InterProIPR001247:IPR015847:IPR015848:IPR018111:IPR 003029:IPR012340:IPR004087:IPR020568:IPR016027:IPR012162:I PR004088~KEGG: dra:DR_2063 polynucleotide phosphorylase/polyadenylase~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%3B K Homology%2C type 1%2C subgroup%3B RNA binding S1 domain protein~PRIAM: Polyribonucleotide nucleotidyltransferase~SMART: KH domain protein~SPTR: Q9RSR1 Polyribonucleotide nucleotidyltransferase~TIGRFAM: polyribonucleotide nucleotidyltransferase~PFAM: KH domain%3B S1 RNA binding domain%3B 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2%3B Polyribonucleotide nucleotidyltransferase%2C RNA binding domain~TIGRFAM: polyribonucleotide nucleotidyltransferase gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1622 Trad_1623 Trad_1623 Trad_1623 1744988 1746712 + RNA-metabolising metallo-beta-lactamase COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily~InterPro IPR011108~KEGG: ttj:TTHA1140 metallo-beta-lactamase superfamily protein~PFAM: RNA-metabolising metallo-beta-lactamase~SPTR: C1XQT5 Predicted hydrolase of the metallo-beta-lactamase superfamily~PFAM: Metallo-beta-lactamase superfamily%3B RNA-metabolising metallo-beta-lactamase~TIGRFAM: conserved hypothetical protein gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1623 Trad_1624 Trad_1624 Trad_1624 1746783 1747031 - hypothetical protein KEGG: hypothetical protein LOC100089199~SPTR: C0P8B4 Putative uncharacterized protein gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1624 Trad_1625 Trad_1625 Trad_1625 1747090 1748085 - aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395~KEGG: chl:Chy400_4145 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: B9LH28 Aldo/keto reductase~PFAM: Aldo/keto reductase family gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1625 Trad_1626 Trad_1626 Trad_1626 1748156 1749157 - aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR020471:IPR001395~KEGG: ttr:Tter_1975 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: D1CGK9 Aldo/keto reductase~PFAM: Aldo/keto reductase family gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1626 Trad_1627 Trad_1627 Trad_1627 1749211 1750071 - Methylglyoxal reductase (NADPH-dependent) COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase~InterPro IPR020471:IPR018170:IPR001395~KEGG: rca:Rcas_1051 2%2C5-didehydrogluconate reductase~PFAM: aldo/keto reductase~PRIAM: Methylglyoxal reductase (NADPH-dependent)~SPTR: A7NI53 2%2C5-didehydrogluconate reductase~PFAM: Aldo/keto reductase family gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1627 Trad_1628 Trad_1628 Trad_1628 1750187 1750693 - transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551:IPR009061~KEGG: rop:ROP_29440 putative MerR family transcriptional regulator~PFAM: regulatory protein MerR~SMART: regulatory protein MerR~SPTR: C1B5R5 Putative MerR family transcriptional regulator~PFAM: MerR family regulatory protein gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1628 Trad_1629 Trad_1629 Trad_1629 1750755 1752158 - conserved hypothetical protein KEGG: noc:Noc_1451 hypothetical protein~SPTR: A0YIH0 Putative uncharacterized protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1629 Trad_1630 Trad_1630 Trad_1630 1752340 1752984 - NUDIX hydrolase InterPro IPR000086:IPR015797~KEGG: scl:sce2779 MutT/NUDIX family protein~PFAM: NUDIX hydrolase~SPTR: A9GB07 MutT/nudix family protein~PFAM: NUDIX domain gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1630 Trad_1631 Trad_1631 Trad_1631 1753164 1754057 + hypothetical protein KEGG: dge:Dgeo_2352 cobaltochelatase%2C CobN subunit~SPTR: Q1J3Z1 Cobaltochelatase%2C CobN subunit gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1631 Trad_1632 Trad_1632 Trad_1632 1754023 1755909 - glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: rop:ROP_43140 putative glycosyltransferase~PFAM: glycosyl transferase family 2~SPTR: A3UEV0 Putative bi-functional transferase/deacetylase~PFAM: Glycosyl transferase family 2 gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1632 Trad_1633 Trad_1633 Trad_1633 1756303 1757781 - isocitrate dehydrogenase COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase~InterPro IPR019818:IPR001804:IPR014273~KEGG: gwc:GWCH70_0444 isocitrate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase~PRIAM: Isocitrate dehydrogenase (NADP(+))~SPTR: A3UKF0 Isocitrate dehydrogenase~TIGRFAM: isocitrate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase~TIGRFAM: isocitrate dehydrogenase%3B isocitrate dehydrogenase%2C NADP-dependent%2C prokaryotic type gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1633 Trad_1634 Trad_1634 Trad_1634 1757917 1758480 - flavodoxin-like protein COGs: COG4635 Flavodoxin~KEGG: cpb:Cphamn1_1410 flavodoxin-like protein~SPTR: B3EJD8 Flavodoxin-like protein gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1634 Trad_1635 Trad_1635 Trad_1635 1758669 1760042 + MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR018062:IPR002528~KEGG: dsa:Desal_0772 MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~SPTR: B9Y424 Putative uncharacterized protein~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1635 Trad_1636 Trad_1636 Trad_1636 1760318 1761169 - protein of unknown function zinc metallopeptidase putative COGs: COG2321 metalloprotease~InterPro IPR007343~KEGG: gau:GAU_2793 hypothetical protein~PFAM: protein of unknown function zinc metallopeptidase putative~SPTR: C1AAN7 Putative uncharacterized protein~PFAM: Putative neutral zinc metallopeptidase gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1636 Trad_1637 Trad_1637 Trad_1637 1761336 1762268 - glycosidase-related protein COGs: COG2152 glycosylase~InterPro IPR007184~KEGG: csc:Csac_0853 glycosidase%2C PH1107-related~PFAM: glycosidase PH1107-related~SPTR: A4XHT5 Glycosidase%2C PH1107-related~PFAM: Domain of unknown function (DUF377) gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1637 Trad_1638 Trad_1638 Trad_1638 1762470 1764467 - threonyl-tRNA synthetase COGs: COG0441 Threonyl-tRNA synthetase~InterProIPR018158:IPR000540:IPR004095:IPR012947:IPR 002314:IPR004154:IPR012675:IPR018163:IPR012676:IPR002320:I PR006195~KEGG: tth:TTC1516 threonyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Threonyl/alanyl tRNA synthetase SAD%3B TGS domain protein%3B Anticodon-binding domain protein~SPTR: C1XMG6 Threonyl-tRNA synthetase%3B Ser-tRNA(Thr) hydrolase~TIGRFAM: threonyl-tRNA synthetase~PFAM: Anticodon binding domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%3B TGS domain~TIGRFAM: threonyl-tRNA synthetase gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1638 Trad_1639 Trad_1639 Trad_1639 1764856 1765779 - GHMP kinase domain protein COGs: COG2605 kinase related to galactokinase and mevalonate kinase~InterProIPR006206:IPR006204:IPR013750:IPR014721:IPR 020568:IPR014606~KEGG: ttr:Tter_2647 GHMP kinase~PFAM: GHMP kinase domain protein%3B GHMP kinase~SPTR: D1CIG4 GHMP kinase~PFAM: GHMP kinases C terminal gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1639 Trad_1640 Trad_1640 Trad_1640 1765942 1766724 + Shikimate 5-dehydrogenase COGs: COG0169 Shikimate 5-dehydrogenase~InterPro IPR016040~KEGG: ddr:Deide_10210 putative shikimate 5-dehydrogenase~SPTR: C1CUN7 Putative Shikimate 5-dehydrogenase gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1640 Trad_1641 Trad_1641 Trad_1641 1766835 1768574 + N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like exopolysaccharide biosynthesis protein COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase~KEGG: ttj:TTHA1786 hypothetical protein~SPTR: C1XGV5 Putative uncharacterized protein~PFAM: Predicted periplasmic protein (DUF2233) gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1641 Trad_1642 Trad_1642 Trad_1642 1768760 1770466 + hypothetical protein KEGG: KLTH0F01518p~SPTR: C5DK38 KLTH0F01518p gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1642 Trad_1643 Trad_1643 Trad_1643 1770463 1771092 + hypothetical protein KEGG: sro:Sros_0251 sugar efflux transporter~SPTR: C6BHG6 Major intrinsic protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1643 Trad_1644 Trad_1644 Trad_1644 1771073 1772656 + hypothetical protein KEGG: col-102%3B COLlagen~SPTR: Q9GZF7 Collagen protein 102%2C partially confirmed by transcript evidence gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1644 Trad_1645 Trad_1645 Trad_1645 1772909 1773106 + hemolysin-type calcium-binding region KEGG: cyn:Cyan7425_0297 hemolysin-type calcium-binding region~SPTR: B8HS32 Hemolysin-type calcium-binding region gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1645 Trad_1646 Trad_1646 Trad_1646 1773157 1773747 - protein of unknown function UPF0029 COGs: COG1739 conserved hypothetical protein~InterPro IPR020569:IPR001498:IPR020568~KEGG: dge:Dgeo_0074 hypothetical protein~PFAM: protein of unknown function UPF0029~SPTR: Q1J2A7 Putative uncharacterized protein~PFAM: Uncharacterized protein family UPF0029~TIGRFAM: conserved hypothetical protein TIGR00257 gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1646 Trad_1647 Trad_1647 Trad_1647 1773989 1775449 + cysteinyl-tRNA synthetase COGs: COG0215 Cysteinyl-tRNA synthetase~InterProIPR015803:IPR015273:IPR014729:IPR009080:IPR 002308~KEGG: dge:Dgeo_1714 cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase class Ia %3B Cysteinyl-tRNA synthetase class Ia DALR~PRIAM: Cysteine--tRNA ligase~SPTR: C1XJI2 Cysteinyl-tRNA synthetase~TIGRFAM: cysteinyl-tRNA synthetase~PFAM: tRNA synthetases class I (C) catalytic domain%3B DALR domain~TIGRFAM: cysteinyl-tRNA synthetase gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1647 Trad_1648 Trad_1648 Trad_1648 1775520 1776638 + DNA protecting protein DprA COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake~InterPro IPR003488:IPR010994~KEGG: dge:Dgeo_2345 DNA processing protein DprA%2C putative~PFAM: SMF family protein~SPTR: Q1IVU7 DNA processing protein DprA%2C putative~TIGRFAM: DNA protecting protein DprA~PFAM: DNA recombination-mediator protein A~TIGRFAM: DNA protecting protein DprA gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1648 Trad_1649 Trad_1649 Trad_1649 1776644 1778542 - alpha amylase catalytic region COGs: COG0366 Glycosidase~InterPro IPR006047:IPR013781:IPR006589:IPR017853~KEGG: asa:ASA_0164 maltodextrin glucosidase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: Q8DAH3 Glycosidases~PFAM: Alpha amylase%2C catalytic domain gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1649 Trad_1650 Trad_1650 Trad_1650 1778620 1779459 - cyclase family protein COGs: COG1878 metal-dependent hydrolase~InterPro IPR007325:IPR006311:IPR017909~KEGG: rca:Rcas_4050 cyclase family protein~PFAM: cyclase family protein~SPTR: A7NR87 Cyclase family protein~PFAM: Putative cyclase gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1650 Trad_1651 Trad_1651 Trad_1651 1779573 1779932 - pseudogene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1651 Trad_1652 Trad_1652 Trad_1652 1779965 1780648 + transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterPro IPR000595:IPR014710:IPR018490:IPR012318~KEGG: sus:Acid_2932 Crp/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~SPTR: C1XRF8 cAMP-binding protein~PFAM: Cyclic nucleotide-binding domain gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1652 Trad_1653 Trad_1653 Trad_1653 1780743 1780979 + 4Fe-4S ferredoxin iron-sulfur binding domain protein InterPro IPR000813:IPR017900:IPR001450:IPR017896~KEGG: ttj:TTHA0177 ferredoxin~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: C1XRL9 Ferredoxin~PFAM: 4Fe-4S binding domain gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1653 Trad_1654 Trad_1654 Trad_1654 1781098 1782210 + FAD dependent oxidoreductase COGs: COG0665 Glycine/D-amino acid oxidase (deaminating)~InterPro IPR006076~KEGG: cau:Caur_3609 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase~SPTR: C1XT29 Glycine/D-amino acid oxidase%2C deaminating~PFAM: FAD dependent oxidoreductase gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1654 Trad_1655 Trad_1655 Trad_1655 1782207 1782611 - conserved hypothetical protein KEGG: chl:Chy400_0773 hypothetical protein~SPTR: B9LKE6 Putative uncharacterized protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1655 Trad_1656 Trad_1656 Trad_1656 1783131 1785008 - conserved hypothetical protein COGs: COG0433 ATPase~KEGG: ddr:Deide_16770 hypothetical protein~SPTR: C1CWT1 Putative uncharacterized protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1656 Trad_1657 Trad_1657 Trad_1657 1785005 1786066 - conserved hypothetical protein COGs: COG2380 conserved hypothetical protein~InterPro IPR017871~KEGG: dra:DR_0836 hypothetical protein~SPTR: Q9RW33 Putative uncharacterized protein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1657 Trad_1658 Trad_1658 Trad_1658 1786122 1788491 - peptidase S45 penicillin amidase COGs: COG2366 Protein related to penicillin acylase~InterPro IPR002692:IPR014395~KEGG: cti:RALTA_A1608 penicillin amidase%2C putative precursor~PFAM: peptidase S45 penicillin amidase~SPTR: B3R236 Penicillin amidase%2C putative~PFAM: Penicillin amidase gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1658 Trad_1659 Trad_1659 Trad_1659 1788888 1791206 + CRISPR-associated helicase Cas3 COGs: COG1203 helicase~InterProIPR006935:IPR014001:IPR006675:IPR006483:IPR 006474:IPR014021:IPR001650~KEGG: mta:Moth_0498 CRISPR-associated helicase Cas3 family protein protein~PFAM: type III restriction protein res subunit~SMART: DEAD-like helicase~SPTR: Q2RL61 CRISPR-associated helicase Cas3%2C core~TIGRFAM: CRISPR-associated helicase Cas3%3B CRISPR-associated HD domain protein%3B metal dependent phophohydrolase~PFAM: HD domain%3B DEAD/DEAH box helicase~TIGRFAM: CRISPR-associated HD domain protein%3B CRISPR-associated helicase Cas3%3B uncharacterized domain HDIG gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1659 Trad_1660 Trad_1660 Trad_1660 1791220 1791951 + CRISPR-associated protein Cas5 family InterPro IPR010155:IPR013422~KEGG: mta:Moth_0497 CRISPR-associated Csd1 family protein~PFAM: CRISPR-associated protein CT1134~SPTR: Q2RL62 CRISPR-associated protein%2C CT1134~TIGRFAM: CRISPR-associated protein Cas5 family%3B CRISPR-associated protein Cas5~PFAM: CRISPR-associated protein (Cas_Cas5)~TIGRFAM: CRISPR-associated protein Cas5%2C Dvulg subtype%3B CRISPR-associated protein Cas5%2C N-terminal domain gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1660 Trad_1661 Trad_1661 Trad_1661 1791948 1793810 + CRISPR-associated protein%2C Csd1 family InterPro IPR003016:IPR010144~KEGG: mta:Moth_0496 CRISPR-associated Csd1 family protein~PFAM: CRISPR-associated protein CT1133~SPTR: Q2RL63 CRISPR-associated protein%2C CT1133~TIGRFAM: CRISPR-associated protein%2C Csd1 family~PFAM: CRISPR-associated protein (Cas_Csd1)~TIGRFAM: CRISPR-associated protein%2C Csd1 family gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1661 Trad_1662 Trad_1662 Trad_1662 1793807 1794706 + CRISPR-associated protein%2C Csd2 family COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR006482:IPR013418~KEGG: mta:Moth_0495 CRISPR-associated Csh2 family protein~PFAM: CRISPR-associated protein TM1801~SPTR: Q2RL64 CRISPR-associated protein TM1801~TIGRFAM: CRISPR-associated protein%2C Csd2 family%3B CRISPR-associated protein%2C CT1132 family~PFAM: Family of unknown function (DUF694)~TIGRFAM: CRISPR-associated protein%2C CT1132 family%3B CRISPR-associated protein%2C Csd2 family gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1662 Trad_1663 Trad_1663 Trad_1663 1794746 1795987 + CRISPR-associated RAMP protein%2C Cmr1 family COGs: COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537:IPR007522~KEGG: dge:Dgeo_0965 CRISPR-associated Cmr1 family protein~PFAM: protein of unknown function DUF324~SPTR: Q1IZR9 CRISPR-associated protein TM1795 family-like protein~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr1 family~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr1 family gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1663 Trad_1664 Trad_1664 Trad_1664 1795984 1797411 + CRISPR-associated protein%2C Crm2 family COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs)~InterPro IPR013407:IPR000160~KEGG: dge:Dgeo_0964 CRISPR-associated Cmr2 family protein~SPTR: Q1IZS0 CRISPR-associated protein Crm2~TIGRFAM: CRISPR-associated protein%2C Crm2 family~PFAM: CRISPR-associated protein~TIGRFAM: CRISPR-associated protein%2C Crm2 family gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1664 Trad_1665 Trad_1665 Trad_1665 1797408 1798565 + CRISPR-associated protein%2C Cmr3 family COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR019117:IPR010165~KEGG: dge:Dgeo_0963 hypothetical protein~PFAM: CRISPR-associated protein%2C Cmr3~SPTR: Q1IZS1 CRISPR-associated RAMP family protein~TIGRFAM: CRISPR-associated protein%2C Cmr3 family~PFAM: CRISPR-associated protein (Cas_Cmr3)~TIGRFAM: CRISPR-associated protein%2C Cmr3 family gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1665 Trad_1666 Trad_1666 Trad_1666 1798568 1799383 + CRISPR-associated RAMP protein%2C Cmr4 family COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537:IPR013410~KEGG: dge:Dgeo_0962 CRISPR-associated RAMP Cmr4 family protein~PFAM: protein of unknown function DUF324~SPTR: Q1IZS2 CRISPR-associated RAMP Cmr4~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr4 family~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr4 family gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1666 Trad_1667 Trad_1667 Trad_1667 1799376 1799780 + CRISPR-associated protein%2C Cmr5 family InterPro IPR010160~KEGG: dge:Dgeo_0961 CRISPR-associated Cmr5 family protein~PFAM: CRISPR-associated protein TM1791.1~SPTR: Q1IZS3 CRISPR-associated protein%2C TM1791.1~TIGRFAM: CRISPR-associated protein%2C Cmr5 family~PFAM: CRISPR-associated protein (Cas_Cmr5)~TIGRFAM: CRISPR-associated protein%2C Cmr5 family gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1667 Trad_1668 Trad_1668 Trad_1668 1799777 1800841 + CRISPR-associated RAMP protein%2C Cmr6 family COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537:IPR010172~KEGG: dge:Dgeo_0960 CRISPR-associated Cmr5 family protein~PFAM: protein of unknown function DUF324~SPTR: Q1IZS4 CRISPR-associated protein%2C TM1791~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr6 family~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr6 family gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1668 Trad_1669 Trad_1669 Trad_1669 1800838 1802094 + CRISPR-associated protein%2C TM1812 family InterPro IPR011742:IPR013383~KEGG: dge:Dgeo_0959 CRISPR-associated TM1812 family protein~PFAM: CRISPR-associated protein TM1812~SPTR: Q1IZS5 CRISPR-associated protein%2C TM1812~TIGRFAM: CRISPR-associated protein%2C TM1812 family%3B CRISPR-associated protein DxTHG motif~PFAM: CRISPR-associated protein (cas_TM1812)~TIGRFAM: CRISPR-associated protein%2C TM1812 family%3B CRISPR-associated DxTHG motif protein gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1669 Trad_1670 Trad_1670 Trad_1670 1802091 1803134 + CRISPR-associated protein%2C APE2256 family COGs: COG4006 conserved hypothetical protein~InterPro IPR013442~KEGG: dge:Dgeo_0958 CRISPR-associated APE2256 family protein~PFAM: CRISPR-associated protein APE2256~SPTR: Q1IZS6 CRISPR-associated protein APE2256~TIGRFAM: CRISPR-associated protein%2C APE2256 family~PFAM: CRISPR-associated protein (Cas_APE2256)~TIGRFAM: putative CRISPR-associated protein%2C APE2256 family gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1670 Trad_1671 Trad_1671 Trad_1671 1803097 1803741 + CRISPR-associated protein Cas4 COGs: COG1468 RecB family exonuclease~InterPro IPR013343~KEGG: eba:ebA3284 RecB family exonuclease protein~PFAM: CRISPR-associated protein Cas4~SPTR: Q5P3Z0 Predicted RecB family exonuclease protein~TIGRFAM: CRISPR-associated protein Cas4~PFAM: Domain of unknown function DUF83~TIGRFAM: CRISPR-associated protein Cas4 gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1671 Trad_1672 Trad_1672 Trad_1672 1803738 1804769 + CRISPR-associated protein Cas1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR002729:IPR019856~KEGG: geo:Geob_3410 CRISPR-associated protein Cas1~PFAM: protein of unknown function DUF48~SPTR: C1XVL9 CRISPR-associated protein%2C Cas1 family~TIGRFAM: CRISPR-associated protein Cas1~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated protein Cas1%3B CRISPR-associated protein Cas1%2C DVULG subtype gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1672 Trad_1673 Trad_1673 Trad_1673 1804785 1805075 + CRISPR-associated protein Cas2 COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR003799~KEGG: mta:Moth_0492 hypothetical protein~PFAM: protein of unknown function DUF196~SPTR: C1XKG3 CRISPR-associated protein%2C Cas2 family~TIGRFAM: CRISPR-associated protein Cas2~PFAM: CRISPR associated protein Cas2~TIGRFAM: CRISPR-associated protein Cas2 gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1673 Trad_1674 Trad_1674 Trad_1674 1807265 1808386 + class II aldolase/adducin family protein InterPro IPR001303~KEGG: sti:Sthe_0139 class II aldolase/adducin family protein~PFAM: class II aldolase/adducin family protein~SPTR: D1C640 Class II aldolase/adducin family protein~PFAM: Class II Aldolase and Adducin N-terminal domain gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1674 Trad_1675 Trad_1675 Trad_1675 1808397 1809179 + short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR002347:IPR002198:IPR016040~KEGG: cai:Caci_6413 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C7PWI7 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1675 Trad_1676 Trad_1676 Trad_1676 1809748 1810607 + Transposase-like protein COGs: COG3293 Transposase and inactivated derivatives~KEGG: dge:Dgeo_2686 putative IS1648 transposase~SPTR: Q1J315 Putative IS1648 transposase~manually curated~PFAM: Transposase DDE domain gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1676 Trad_1677 Trad_1677 Trad_1677 1810668 1810952 + hypothetical protein KEGG: hypothetical protein~SPTR: Q9P526 Predicted protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1677 Trad_1678 Trad_1678 Trad_1678 1811474 1812007 + multisubunit sodium/proton antiporter%2C MrpE subunit (2.A.63.1) COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit~InterPro IPR002758~KEGG: sse:Ssed_1390 cation antiporter~PFAM: cation antiporter~SPTR: A8FT28 Cation antiporter~PFAM: Na+/H+ ion antiporter subunit gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1678 Trad_1679 Trad_1679 Trad_1679 1812004 1812294 + multisubunit sodium/proton antiporter%2C MrpF subunit (2.A.63.1) KEGG: tgr:Tgr7_2668 multiple resistance and pH regulation protein F~SPTR: B8GMS8 Multiple resistance and pH regulation protein F~PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1679 Trad_1680 Trad_1680 Trad_1680 1812291 1812611 + multisubunit sodium/proton antiporter%2C MrpG subunit (2.A.63.1) COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit~InterPro IPR005133~KEGG: sfr:Sfri_2737 putative monovalent cation/H+ antiporter subunit G~PFAM: Na+/H+ antiporter subunit~SPTR: Q07ZI7 Monovalent cation/proton antiporter%2C MnhG/PhaG subunit~TIGRFAM: monovalent cation/proton antiporter%2C MnhG/PhaG subunit~PFAM: Na+/H+ antiporter subunit~TIGRFAM: monovalent cation/proton antiporter%2C MnhG/PhaG subunit gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1680 Trad_1681 Trad_1681 Trad_1681 1812632 1812865 + conserved hypothetical protein KEGG: sse:Ssed_1394 hypothetical protein~SPTR: A8FT32 Putative uncharacterized protein gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1681 Trad_1682 Trad_1682 Trad_1682 1812894 1813679 + multisubunit sodium/proton antiporter%2C MrpB subunit (2.A.63.1) InterPro IPR007182~KEGG: aeh:Mlg_0741 hypothetical protein~PFAM: Na+/H+ antiporter MnhB subunit-related protein~SPTR: B9ZPM7 Putative uncharacterized protein~PFAM: Domain related to MnhB subunit of Na+/H+ antiporter gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1682 Trad_1683 Trad_1683 Trad_1683 1813676 1814029 + multisubunit sodium/proton antiporter%2C MrpC subunit (2.A.63.1) COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit~InterPro IPR001133~KEGG: hha:Hhal_0814 NADH-ubiquinone oxidoreductase%2C chain 4L~PFAM: NADH-ubiquinone oxidoreductase chain 4L~SPTR: A1WV78 NADH-ubiquinone oxidoreductase%2C chain 4L~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1683 Trad_1684 Trad_1684 Trad_1684 1814087 1815547 + multisubunit sodium/proton antiporter%2C MrpD subunit (2.A.63.1) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR003918:IPR001750~KEGG: sfr:Sfri_2741 NADH dehydrogenase (quinone)~PFAM: NADH/Ubiquinone/plastoquinone (complex I)~SPTR: Q07ZI3 NADH dehydrogenase (Quinone)~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1684 Trad_1685 Trad_1685 Trad_1685 1815591 1817111 + NADH/Ubiquinone/plastoquinone (complex I) COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit~InterPro IPR003916:IPR018170:IPR001750~KEGG: sse:Ssed_1398 NADH dehydrogenase (quinone)~PFAM: NADH/Ubiquinone/plastoquinone (complex I)~SPTR: A8FT36 NADH dehydrogenase (Quinone)~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1685 Trad_1686 Trad_1686 Trad_1686 1817108 1818853 + NADH/Ubiquinone/plastoquinone (complex I) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR003916:IPR001750~KEGG: noc:Noc_1279 NADH/ubiquinone/plastoquinone (complex I)~PFAM: NADH/Ubiquinone/plastoquinone (complex I)~SPTR: Q3JBL7 NADH/Ubiquinone/plastoquinone (Complex I)~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1686 Trad_1687 Trad_1687 Trad_1687 1818947 1819237 + hypothetical protein KEGG: pau:PA14_08520 anhydro-N-acetylmuramic acid kinase~SPTR: Q02TA0 Putative chaperone gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1687 Trad_1688 Trad_1688 Trad_1688 1819211 1819597 - Roadblock/LC7 family protein InterPro IPR004942~KEGG: ddr:Deide_12490 hypothetical protein~PFAM: Roadblock/LC7 family protein~SPTR: C1CVF1 Putative uncharacterized protein~PFAM: Roadblock/LC7 domain gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1688 Trad_1689 Trad_1689 Trad_1689 1819825 1820544 + purine or other phosphorylase family 1 COGs: COG0813 Purine-nucleoside phosphorylase~InterPro IPR000845~KEGG: ttj:TTHA1435 purine nucleoside phosphorylase~PFAM: purine or other phosphorylase family 1~SPTR: B7AA34 Purine or other phosphorylase family 1~PFAM: Phosphorylase superfamily~TIGRFAM: purine-nucleoside phosphorylase%2C family 1 (deoD) gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1689 Trad_1690 Trad_1690 Trad_1690 1820541 1821404 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase~InterProIPR006180:IPR006176:IPR006108:IPR016040:IPR 013328:IPR008927~KEGG: mpt:Mpe_A0900 3-hydroxybutyryl-CoA dehydrogenase~PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~SPTR: A2SE73 3-hydroxyacyl-CoA dehydrogenase~PFAM: 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%3B 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1690 Trad_1691 Trad_1691 Trad_1691 1821451 1822305 + Enoyl-CoA hydratase/isomerase COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase~InterPro IPR018376:IPR001753~KEGG: ttj:TTHA1434 3-hydroxybutyryl-CoA dehydratase~PFAM: Enoyl-CoA hydratase/isomerase~SPTR: Q5SIE0 3-hydroxybutyryl-CoA dehydratase~PFAM: Enoyl-CoA hydratase/isomerase family gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1691 Trad_1692 Trad_1692 Trad_1692 1822433 1822774 - Cupin 2 conserved barrel domain protein InterPro IPR013096:IPR014710:IPR011051~KEGG: mxa:MXAN_5309 hypothetical protein~PFAM: Cupin 2 conserved barrel domain protein~SPTR: Q1D1L3 Putative uncharacterized protein~PFAM: Cupin domain gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1692 Trad_1693 Trad_1693 Trad_1693 1822848 1823711 - protein of unknown function DUF1028 COGs: COG3342 conserved hypothetical protein~InterPro IPR010430:IPR014927~KEGG: hau:Haur_3098 hypothetical protein~PFAM: protein of unknown function DUF1028%3B Putative peptidoglycan binding~SPTR: A9B5U3 Putative uncharacterized protein~PFAM: Putative peptidoglycan binding domain%3B Family of unknown function (DUF1028) gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1693 Trad_1694 Trad_1694 Trad_1694 1823884 1824861 + alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000639:IPR000073~KEGG: tle:Tlet_0831 alpha/beta hydrolase domain-containing protein~PFAM: alpha/beta hydrolase fold~SPTR: A8F5G3 Alpha/beta hydrolase fold domain-containing protein~PFAM: alpha/beta hydrolase fold gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1694 Trad_1695 Trad_1695 Trad_1695 1824993 1826546 + ABC transporter related protein COGs: COG3845 ABC-type uncharacterized transport systems ATPase components~InterPro IPR017871:IPR003439:IPR003593~KEGG: mta:Moth_1952 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XKI4 Nucleoside ABC transporter ATP-binding protein~PFAM: ABC transporter gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1695 Trad_1696 Trad_1696 Trad_1696 1826543 1827688 + inner-membrane translocator COGs: COG4603 ABC-type uncharacterized transport system permease component~InterPro IPR001851~KEGG: ttj:TTHA1303 sugar ABC transporter%2C permease protein~PFAM: inner-membrane translocator~SPTR: C1XTA6 Nucleoside ABC transporter membrane protein~PFAM: Branched-chain amino acid transport system / permease component gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1696 Trad_1697 Trad_1697 Trad_1697 1827663 1828592 + inner-membrane translocator COGs: COG1079 ABC-type transport system permease component~InterPro IPR001851~KEGG: dau:Daud_1909 inner-membrane translocator~PFAM: inner-membrane translocator~SPTR: B1I5V4 Inner-membrane translocator~PFAM: Branched-chain amino acid transport system / permease component gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1697 Trad_1698 Trad_1698 Trad_1698 1828792 1829940 + basic membrane lipoprotein COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein~InterPro IPR003760~KEGG: ttj:TTHA1301 hypothetical protein~PFAM: basic membrane lipoprotein~SPTR: B7AAZ2 Basic membrane lipoprotein~PFAM: Basic membrane protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1698 Trad_1699 Trad_1699 Trad_1699 1830007 1831824 - Adenine deaminase COGs: COG1001 Adenine deaminase~InterPro IPR006680:IPR011059~KEGG: ote:Oter_3584 adenine deaminase~PFAM: amidohydrolase~PRIAM: Adenine deaminase~SPTR: B1ZWA9 Adenine deaminase~PFAM: Amidohydrolase family~TIGRFAM: adenine deaminase gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1699 Trad_1700 Trad_1700 Trad_1700 1832032 1833351 - ribosome-associated GTPase EngA COGs: COG1160 GTPase~InterPro IPR002917:IPR005225:IPR016484~KEGG: ddr:Deide_23290 putative GTP-binding protein~PFAM: GTP-binding protein HSR1-related~SPTR: C1D094 GTP-binding protein engA~TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein domain gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1700 Trad_1701 Trad_1701 Trad_1701 1833344 1834321 - methionyl-tRNA formyltransferase COGs: COG0223 Methionyl-tRNA formyltransferase~InterPro IPR002376:IPR005793:IPR011034:IPR005794~KEGG: dge:Dgeo_2291 methionyl-tRNA formyltransferase~PFAM: formyl transferase domain protein~SPTR: C1XRQ5 Methionyl-tRNA formyltransferase~TIGRFAM: methionyl-tRNA formyltransferase~PFAM: Formyl transferase%3B Formyl transferase%2C C-terminal domain~TIGRFAM: methionyl-tRNA formyltransferase gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1701 Trad_1702 Trad_1702 Trad_1702 1834318 1834956 - peptide deformylase COGs: COG0242 N-formylmethionyl-tRNA deformylase~InterPro IPR000181~KEGG: ttj:TTHA0321 polypeptide deformylase~PFAM: formylmethionine deformylase~PRIAM: Peptide deformylase~SPTR: B7A8I7 Peptide deformylase~TIGRFAM: peptide deformylase~PFAM: Polypeptide deformylase~TIGRFAM: peptide deformylase gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1702 Trad_1703 Trad_1703 Trad_1703 1835061 1836041 - YbbR family protein COGs: COG4856 conserved hypothetical protein~InterPro IPR012505~KEGG: mta:Moth_2247 YbbR-like~PFAM: YbbR family protein~SPTR: Q2RGA5 YbbR-like~PFAM: YbbR-like protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1703 Trad_1704 Trad_1704 Trad_1704 1836212 1837036 - protein of unknown function DUF147 COGs: COG1624 conserved hypothetical protein~InterPro IPR003390:IPR014046~KEGG: dra:DR_0007 hypothetical protein~PFAM: protein of unknown function DUF147~SPTR: C1XRQ8 Putative uncharacterized protein~PFAM: DisA bacterial checkpoint controller nucleotide-binding~TIGRFAM: conserved hypothetical protein TIGR00159 gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1704 Trad_1705 Trad_1705 Trad_1705 1837362 1838496 + conserved hypothetical protein KEGG: bpm:BURPS1710b_3602 hypothetical protein~SPTR: P0C348 Peptide chain release factor 2~manually curated~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 2 gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1705 Trad_1706 Trad_1706 Trad_1706 1838652 1840016 - MscS Mechanosensitive ion channel COGs: COG0668 Small-conductance mechanosensitive channel~InterProIPR007055:IPR006685:IPR011066:IPR010920:IPR 011014~KEGG: eli:ELI_14250 hypothetical protein~PFAM: MscS Mechanosensitive ion channel%3B transport-associated~SPTR: A3VRS8 Putative uncharacterized protein~PFAM: Mechanosensitive ion channel%3B Putative phospholipid-binding domain gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1706 Trad_1707 Trad_1707 Trad_1707 1840071 1840706 + putative phosphohydrolase KEGG: tth:TTC1953 putative phosphohydrolase~SPTR: C1XI71 Predicted phosphoesterase%2C ICC gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1707 Trad_1708 Trad_1708 Trad_1708 1841065 1841976 + conserved hypothetical protein KEGG: dge:Dgeo_1720 hypothetical protein~SPTR: Q1IXL9 Conserved hypothetical membrane protein~PFAM: ParB-like nuclease domain gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1708 Trad_1709 Trad_1709 Trad_1709 1842118 1843164 + folate-binding protein YgfZ COGs: COG0354 aminomethyltransferase related to GcvT~InterPro IPR006222:IPR013977:IPR017703~KEGG: ddr:Deide_19140 putative aminomethyltransferase~PFAM: glycine cleavage T protein (aminomethyl transferase)%3B Glycine cleavage T-protein barrel~SPTR: C1CXI9 Putative aminomethyltransferase~TIGRFAM: folate-binding protein YgfZ~PFAM: Aminomethyltransferase folate-binding domain%3B Glycine cleavage T-protein C-terminal barrel domain~TIGRFAM: folate-binding protein YgfZ gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1709 Trad_1710 Trad_1710 Trad_1710 1843202 1844848 + methylmalonyl-CoA mutase%2C large subunit COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit~InterPro IPR006099:IPR014348:IPR016176:IPR006098~KEGG: dge:Dgeo_0862 methylmalonyl-CoA mutase%2C alpha subunit~PFAM: methylmalonyl-CoA mutase~PRIAM: Methylmalonyl-CoA mutase~SPTR: Q1J020 Methylmalonyl-CoA mutase%2C alpha subunit~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: Methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase N-terminal domain gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1710 Trad_1711 Trad_1711 Trad_1711 1845080 1845496 + cobalamin B12-binding domain protein COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding)~InterPro IPR006158:IPR006159~KEGG: ttj:TTHA1038 methylmalonyl-CoA mutase%2C alpha subunit%2C chain B~PFAM: cobalamin B12-binding domain protein~SPTR: Q72JU2 Methylmalonyl-CoA mutase small subunit~PFAM: B12 binding domain~TIGRFAM: methylmalonyl-CoA mutase C-terminal domain gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1711 Trad_1712 Trad_1712 Trad_1712 1845765 1846580 + class II aldolase/adducin family protein COGs: COG3347 conserved hypothetical protein~InterPro IPR001303~KEGG: ote:Oter_3319 class II aldolase/adducin family protein~PFAM: class II aldolase/adducin family protein~SPTR: B1ZTE4 Class II aldolase/adducin family protein~PFAM: Class II Aldolase and Adducin N-terminal domain gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1712 Trad_1713 Trad_1713 Trad_1713 1846577 1848079 + Carbohydrate kinase%2C FGGY COGs: COG1070 Sugar (pentulose and hexulose) kinase~InterPro IPR018484~KEGG: cag:Cagg_3317 carbohydrate kinase FGGY~PFAM: Carbohydrate kinase%2C FGGY-like~SPTR: B8G8B1 Carbohydrate kinase FGGY~PFAM: FGGY family of carbohydrate kinases%2C N-terminal domain%3B FGGY family of carbohydrate kinases%2C C-terminal domain gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1713 Trad_1714 Trad_1714 Trad_1714 1848099 1848392 + glutamyl-tRNA(Gln) amidotransferase%2C C subunit COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit~InterPro IPR003837~KEGG: dra:DR_1275 aspartyl/glutamyl-tRNA amidotransferase subunit C~PFAM: Glu-tRNAGln amidotransferase C subunit~SPTR: Q9RUV6 Glutamyl-tRNA(Gln) amidotransferase subunit C~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C C subunit~PFAM: Glu-tRNAGln amidotransferase C subunit~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C C subunit gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1714 Trad_1715 Trad_1715 Trad_1715 1848533 1849069 + hypothetical protein KEGG: sus:Acid_6569 beta-N-acetylhexosaminidase~SPTR: Q01S79 Beta-N-acetylhexosaminidase gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1715 Trad_1716 Trad_1716 Trad_1716 1849136 1850416 - seryl-tRNA synthetase COGs: COG0172 Seryl-tRNA synthetase~InterProIPR018156:IPR015866:IPR002314:IPR010978:IPR 002317:IPR006195~KEGG: rmr:Rmar_1968 seryl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Seryl-tRNA synthetase%2C class IIa-like~PRIAM: Serine--tRNA ligase~SPTR: D0MKD9 Seryl-tRNA synthetase~TIGRFAM: seryl-tRNA synthetase~PFAM: Seryl-tRNA synthetase N-terminal domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: seryl-tRNA synthetase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1716 Trad_1717 Trad_1717 Trad_1717 1850456 1851265 - Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: ckr:CKR_0924 hypothetical protein~PFAM: Methyltransferase type 11~SPTR: B9E0F0 Putative uncharacterized protein~PFAM: Methyltransferase domain gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1717 Trad_1718 Trad_1718 Trad_1718 1851434 1852951 + extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: sth:STH1422 oligopeptide ABC transporter substrate-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: Q67PI6 Oligopeptide ABC transporter substrate-binding protein~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1718 Trad_1719 Trad_1719 Trad_1719 1852999 1853916 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: oca:OCAR_7514 inner membrane ABC transporter permease protein YddR~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B6JJM3 Inner membrane ABC transporter permease protein YddR~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1719 Trad_1720 Trad_1720 Trad_1720 1853909 1854802 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: jan:Jann_4129 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q28JR6 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1720 Trad_1721 Trad_1721 Trad_1721 1854930 1856099 + amidohydrolase COGs: COG1228 Imidazolonepropionase and related amidohydrolase~InterPro IPR000408:IPR006680:IPR011059~KEGG: nth:Nther_2716 amidohydrolase~PFAM: amidohydrolase~SPTR: B2A2Q1 Amidohydrolase~PFAM: Amidohydrolase family gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1721 Trad_1722 Trad_1722 Trad_1722 1856065 1857525 - conserved hypothetical protein KEGG: ttj:TTHB091 hypothetical protein~SPTR: C1XIF8 Lysophospholipase gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1722 Trad_1723 Trad_1723 Trad_1723 1857623 1858816 - acyl-CoA dehydrogenase domain protein COGs: COG1960 Acyl-CoA dehydrogenase~InterProIPR006089:IPR006092:IPR006091:IPR006090:IPR 013786:IPR013764:IPR009100:IPR009075~KEGG: dge:Dgeo_0812 acyl-CoA dehydrogenase-like protein~PFAM: acyl-CoA dehydrogenase domain protein~SPTR: Q1J070 Acyl-CoA dehydrogenase-like protein~PFAM: Acyl-CoA dehydrogenase%2C C-terminal domain%3B Acyl-CoA dehydrogenase%2C middle domain%3B Acyl-CoA dehydrogenase%2C N-terminal domain gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1723 Trad_1724 Trad_1724 Trad_1724 1858941 1859321 + chorismate mutase COGs: COG4401 Chorismate mutase~InterPro IPR008243:IPR013813~KEGG: ttj:TTHA0868 chorismate mutase~PFAM: Chorismate mutase of the AroH class~SPTR: C1XFC3 Chorismate mutase~TIGRFAM: chorismate mutase~PFAM: Chorismate mutase type I~TIGRFAM: monofunctional chorismate mutase%2C gram positive type%2C clade 1 gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1724 Trad_1725 Trad_1725 Trad_1725 1859347 1860273 - NMT1/THI5 like domain protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR015168~KEGG: cag:Cagg_1941 NMT1/THI5 like domain protein~PFAM: NMT1/THI5 like domain protein~SPTR: B8GBL9 NMT1/THI5 like domain protein~PFAM: NMT1/THI5 like gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1725 Trad_1726 Trad_1726 Trad_1726 1860413 1860688 - conserved hypothetical protein KEGG: ttj:TTHA1700 hypothetical protein~SPTR: C1XSF7 Putative uncharacterized protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1726 Trad_1727 Trad_1727 Trad_1727 1860697 1861677 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761:IPR010982~KEGG: rle:pRL100275 putative transcriptional regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: Q1M7M9 Putative transcriptional regulator~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1727 Trad_1728 Trad_1728 Trad_1728 1861902 1863929 + Beta-galactosidase COGs: COG1874 Beta-galactosidase~InterProIPR000684:IPR013529:IPR013738:IPR013739:IPR 013781:IPR017853:IPR003476~KEGG: sen:SACE_5154 putative beta-galactosidase~PFAM: Glycoside hydrolase family 42 domain protein%3B Beta-galactosidase trimerisation domain protein%3B Beta-galactosidase domain protein~PRIAM: Beta-galactosidase~SPTR: A4FK23 Putative beta-galactosidase~PFAM: Beta-galactosidase trimerisation domain%3B Beta-galactosidase C-terminal domain%3B Beta-galactosidase gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1728 Trad_1729 Trad_1729 Trad_1729 1864041 1865318 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: ara:Arad_0129 sugar ABC transporter~PFAM: extracellular solute-binding protein family 1~SPTR: C1XGL4 Carbohydrate ABC transporter substrate-binding protein%2C CUT1 family~PFAM: Bacterial extracellular solute-binding protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1729 Trad_1730 Trad_1730 Trad_1730 1865491 1866348 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: mlo:mlr6436 ABC transporter sugar permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: O69313 Integral membrane protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1730 Trad_1731 Trad_1731 Trad_1731 1866345 1867175 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: atc:AGR_L_3322 putative integral membrane protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q9X6C5 Putative integral membrane protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1731 Trad_1732 Trad_1732 Trad_1732 1867471 1868229 + 5-carboxymethyl-2-hydroxymuconateDelta-isomerase COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway)~InterPro IPR002529:IPR011234~KEGG: dra:DR_1609 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1%2C7-dioate decarboxylase-related protein~PFAM: fumarylacetoacetate (FAA) hydrolase~PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase~SPTR: Q9LBE3 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1%2C7-dioate decarboxylase-related protein~PFAM: Fumarylacetoacetate (FAA) hydrolase family gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1732 Trad_1733 Trad_1733 Trad_1733 1868226 1869206 + beta-lactamase-like protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: rxy:Rxyl_2947 beta-lactamase-like protein~SPTR: Q1ARX1 Beta-lactamase-like protein~PFAM: Metallo-beta-lactamase superfamily gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1733 Trad_1734 Trad_1734 Trad_1734 1869266 1870975 - binding-protein-dependent transport systems inner membrane component COGs: COG1178 ABC-type Fe3+ transport system permease component~InterPro IPR000515~KEGG: cya:CYA_2783 iron ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q2JR78 Ferric iron uptake ABC transporter (FeT) family%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1734 Trad_1735 Trad_1735 Trad_1735 1871075 1872040 - extracellular solute-binding protein family 1 COGs: COG1840 ABC-type Fe3+ transport system periplasmic component~InterPro IPR006059~KEGG: cya:CYA_2782 iron ABC transporter iron-binding subunit~PFAM: extracellular solute-binding protein family 1~SPTR: Q2JR79 Brachyspira iron ABC transporter (BIT) family%2C iron-binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1735 Trad_1736 Trad_1736 Trad_1736 1872116 1873030 - Substrate-binding region of ABC-type glycine betaine transport system COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components~InterPro IPR007210~KEGG: nth:Nther_2053 substrate-binding region of ABC-type glycine betaine transport system~PFAM: Substrate-binding region of ABC-type glycine betaine transport system~SPTR: B2A729 Substrate-binding region of ABC-type glycine betaine transport system~PFAM: Substrate binding domain of ABC-type glycine betaine transport system~TIGRFAM: choline ABC transporter%2C periplasmic binding protein gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1736 Trad_1737 Trad_1737 Trad_1737 1873192 1874211 + ABC transporter related protein COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component~InterPro IPR017871:IPR003439:IPR000644:IPR003593~KEGG: bcv:Bcav_1227 glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B CBS domain containing protein~SMART: AAA ATPase~SPTR: C1YFQ5 Glycine betaine/L-proline transport ATP binding subunit~PFAM: ABC transporter%3B CBS domain gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1737 Trad_1738 Trad_1738 Trad_1738 1874208 1875110 + binding-protein-dependent transport systems inner membrane component COGs: COG4176 ABC-type proline/glycine betaine transport system permease component~InterPro IPR000515~KEGG: mxa:MXAN_2250 glycine betaine/L-proline ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1DA52 Glycine betaine/L-proline ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1738 Trad_1739 Trad_1739 Trad_1739 1875180 1877642 - Alpha-glucosidase COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase~InterPro IPR000322:IPR017853~KEGG: hau:Haur_2545 alpha-glucosidase~PFAM: glycoside hydrolase family 31~PRIAM: Alpha-glucosidase~SPTR: C5SE11 Alpha-glucosidase~PFAM: Glycosyl hydrolases family 31 gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1739 Trad_1740 Trad_1740 Trad_1740 1877778 1878536 - metallophosphoesterase InterPro IPR004843~KEGG: dge:Dgeo_0189 metallophosphoesterase~PFAM: metallophosphoesterase~SPTR: Q1J1Z2 Calcineurin family phosphoesterase gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1740 Trad_1741 Trad_1741 Trad_1741 1878543 1879238 - conserved hypothetical protein KEGG: ttj:TTHA0081 hypothetical protein~SPTR: Q72GC5 Hypothetical conserved protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1741 Trad_1742 Trad_1742 Trad_1742 1879416 1881923 + hypothetical protein InterPro IPR002345~KEGG: dge:Dgeo_0178 tetratricopeptide TPR_2~SPTR: Q1J203 Tetratricopeptide TPR_2 gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1742 Trad_1743 Trad_1743 Trad_1743 1882008 1882295 + protein of unknown function DUF427 COGs: COG2343 conserved hypothetical protein~InterPro IPR007361~KEGG: mbu:Mbur_2270 hypothetical protein~PFAM: protein of unknown function DUF427~SPTR: Q12TU5 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF427) gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1743 Trad_1744 Trad_1744 Trad_1744 1882469 1882975 - multisubunit sodium/proton antiporter%2C MrpE subunit (2.A.63.1) COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit~InterPro IPR002758~KEGG: sse:Ssed_1390 cation antiporter~PFAM: cation antiporter~SPTR: C0GUH9 Cation antiporter~PFAM: Na+/H+ ion antiporter subunit gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1744 Trad_1745 Trad_1745 Trad_1745 1882972 1884420 - multisubunit sodium/proton antiporter%2C MrpD subunit (2.A.63.1) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR003918:IPR001750~KEGG: sfr:Sfri_2741 NADH dehydrogenase (quinone)~PFAM: NADH/Ubiquinone/plastoquinone (complex I)~SPTR: Q07ZI3 NADH dehydrogenase (Quinone)~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1745 Trad_1746 Trad_1746 Trad_1746 1884422 1884727 - multisubunit sodium/proton antiporter%2C MrpC subunit (2.A.63.1) COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit~InterPro IPR001133~KEGG: hha:Hhal_0814 NADH-ubiquinone oxidoreductase%2C chain 4L~PFAM: NADH-ubiquinone oxidoreductase chain 4L~SPTR: A1WV78 NADH-ubiquinone oxidoreductase%2C chain 4L~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1746 Trad_1747 Trad_1747 Trad_1747 1884724 1885440 - multisubunit sodium/proton antiporter%2C MrpB subunit (2.A.63.1) InterPro IPR007182~KEGG: tgr:Tgr7_2665 hypothetical protein~PFAM: Na+/H+ antiporter MnhB subunit-related protein~SPTR: B9ZPM7 Putative uncharacterized protein~PFAM: Domain related to MnhB subunit of Na+/H+ antiporter gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1747 Trad_1748 Trad_1748 Trad_1748 1885437 1885712 - conserved hypothetical protein KEGG: sfr:Sfri_2738 hypothetical protein~SPTR: Q07ZI6 Putative uncharacterized protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1748 Trad_1749 Trad_1749 Trad_1749 1885705 1886106 - multisubunit sodium/proton antiporter%2C MrpG subunit (2.A.63.1) COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit~InterPro IPR005133~KEGG: tgr:Tgr7_2667 putative monovalent cation/H+ antiporter subunit G~PFAM: Na+/H+ antiporter subunit~SPTR: B8GMS7 Putative monovalent cation/H+ antiporter subunit G~TIGRFAM: monovalent cation/proton antiporter%2C MnhG/PhaG subunit~PFAM: Na+/H+ antiporter subunit~TIGRFAM: monovalent cation/proton antiporter%2C MnhG/PhaG subunit gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1749 Trad_1750 Trad_1750 Trad_1750 1886103 1886393 - multisubunit sodium/proton antiporter%2C MrpF subunit (2.A.63.1) KEGG: noc:Noc_1286 multiple resistance and pH regulation protein F~SPTR: Q3JBL0 Multiple resistance and pH regulation protein F gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1750 Trad_1751 Trad_1751 Trad_1751 1886642 1887520 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: dge:Dgeo_1301 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: Q1IYT7 Putative uncharacterized protein~PFAM: EamA-like transporter family gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1751 Trad_1752 Trad_1752 Trad_1752 1887756 1889048 + argininosuccinate synthase COGs: COG0137 Argininosuccinate synthase~InterPro IPR018223:IPR001518:IPR014729~KEGG: ttr:Tter_0324 argininosuccinate synthase~PFAM: argininosuccinate synthase~PRIAM: Argininosuccinate synthase~SPTR: D1CE90 Argininosuccinate synthase~TIGRFAM: argininosuccinate synthase~PFAM: Arginosuccinate synthase~TIGRFAM: argininosuccinate synthase gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1752 Trad_1753 Trad_1753 Trad_1753 1889048 1889503 + GCN5-related N-acetyltransferase InterPro IPR000182:IPR016181~KEGG: nca:Noca_3256 tRNA (guanine37-N1) methyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: C1XGX7 Predicted acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1753 Trad_1754 Trad_1754 Trad_1754 1889520 1889984 - conserved hypothetical protein KEGG: sus:Acid_1246 hypothetical protein~SPTR: Q029N6 Putative uncharacterized protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1754 Trad_1755 Trad_1755 Trad_1755 1889981 1890223 - hypothetical protein KEGG: art:Arth_1193 glycosyl transferase family protein~SPTR: Q77CD0 UL32 protein gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1755 Trad_1756 Trad_1756 Trad_1756 1890258 1891661 + argininosuccinate lyase COGs: COG0165 Argininosuccinate lyase~InterProIPR003031:IPR000362:IPR020557:IPR008948:IPR 009049~KEGG: dge:Dgeo_2065 argininosuccinate lyase~PFAM: fumarate lyase~SPTR: D0T647 Argininosuccinate lyase~TIGRFAM: argininosuccinate lyase~manually curated~PFAM: Lyase~TIGRFAM: argininosuccinate lyase gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1756 Trad_1757 Trad_1757 Trad_1757 1891658 1892218 + GCN5-related N-acetyltransferase COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase~InterPro IPR000182:IPR016181~KEGG: ddr:Deide_00790 putative amino-acid acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: C1CXS3 Putative amino-acid acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1757 Trad_1758 Trad_1758 Trad_1758 1892277 1894334 - diguanylate cyclase COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain~InterProIPR001440:IPR011717:IPR000160:IPR011990:IPR 019734:IPR013026~KEGG: cts:Ctha_1726 diguanylate cyclase and serine/threonine protein kinase with TPR repeats~PFAM: GGDEF domain containing protein%3B TPR repeat-containing protein%3B Tetratricopeptide TPR_4~PRIAM: Diguanylate kinase~SMART: GGDEF domain containing protein%3B Tetratricopeptide repeat~SPTR: C1XM61 Diguanylate cyclase (GGDEF) domain-containing protein~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1758 Trad_1759 Trad_1759 Trad_1759 1894597 1895685 + L-asparaginase%2C type I COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D~InterPro IPR006034:IPR020827:IPR006033~KEGG: dba:Dbac_3330 L-asparaginase%2C type I~PFAM: Asparaginase/glutaminase~PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase~SPTR: C7LP92 L-asparaginase%2C type I~TIGRFAM: L-asparaginase%2C type I~PFAM: Asparaginase~TIGRFAM: L-asparaginases%2C type I gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1759 Trad_1760 Trad_1760 Trad_1760 1895729 1896670 - hypothetical protein KEGG: nca:Noca_1817 hypothetical protein~SPTR: B5HJS5 Secreted protein~PFAM: Lysyl oxidase gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1760 Trad_1761 Trad_1761 Trad_1761 1896908 1897237 + Cupin 2 conserved barrel domain protein COGs: COG0662 Mannose-6-phosphate isomerase~InterPro IPR013096:IPR014710:IPR011051~KEGG: rxy:Rxyl_2863 cupin 2%2C barrel~PFAM: Cupin 2 conserved barrel domain protein~SPTR: Q1AS53 Cupin 2%2C conserved barrel~PFAM: Cupin domain gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1761 Trad_1762 Trad_1762 Trad_1762 1897234 1897668 + methylmalonyl-CoA epimerase InterPro IPR004360:IPR017515~KEGG: dge:Dgeo_1790 glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: Q1IXE9 Glyoxalase/bleomycin resistance protein/dioxygenase~TIGRFAM: methylmalonyl-CoA epimerase~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily~TIGRFAM: methylmalonyl-CoA epimerase gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1762 Trad_1763 Trad_1763 Trad_1763 1897665 1898030 + VanZ family protein InterPro IPR006976~KEGG: dra:DR_2023 hypothetical protein~PFAM: VanZ family protein~SPTR: Q9RSU9 Putative uncharacterized protein~PFAM: VanZ like family gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1763 Trad_1764 Trad_1764 Trad_1764 1898071 1898859 + pyrroline-5-carboxylate reductase COGs: COG0345 Pyrroline-5-carboxylate reductase~InterPro IPR004455:IPR016040:IPR000304~KEGG: dge:Dgeo_0841 pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent~PRIAM: Pyrroline-5-carboxylate reductase~SPTR: Q1J041 Pyrroline-5-carboxylate reductase~TIGRFAM: pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent~TIGRFAM: pyrroline-5-carboxylate reductase gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1764 Trad_1765 Trad_1765 Trad_1765 1898929 1899147 - conserved hypothetical protein KEGG: sal:Sala_1429 hypothetical protein~SPTR: Q1GT79 Putative uncharacterized protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1765 Trad_1766 Trad_1766 Trad_1766 1899239 1900489 - queuine tRNA-ribosyltransferase COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase~InterPro IPR002616:IPR004803~KEGG: rrs:RoseRS_1302 queuine tRNA-ribosyltransferase~PFAM: Queuine/other tRNA-ribosyltransferase~PRIAM: tRNA-guanine transglycosylase~SPTR: A5USV3 Queuine tRNA-ribosyltransferase~TIGRFAM: queuine tRNA-ribosyltransferase%3B tRNA-guanine transglycosylase%2C various specificities~PFAM: Queuine tRNA-ribosyltransferase~TIGRFAM: tRNA-guanine transglycosylases%2C various specificities%3B tRNA-guanine transglycosylase%2C queuosine-34-forming gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1766 Trad_1767 Trad_1767 Trad_1767 1900621 1901595 + AFG1-family ATPase COGs: COG1485 ATPase~InterPro IPR005654~KEGG: dge:Dgeo_2019 AFG1-like protein ATPase~PFAM: AFG1-family ATPase~SPTR: Q1IWS1 AFG1-like protein ATPase~PFAM: AFG1-like ATPase gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1767 Trad_1768 Trad_1768 Trad_1768 1901617 1901781 - hypothetical protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1768 Trad_1769 Trad_1769 Trad_1769 1902863 1903987 + transaldolase COGs: COG0176 Transaldolase~InterProIPR018225:IPR001585:IPR013785:IPR004732:IPR 014634~KEGG: gvi:glr3377 transaldolase~PFAM: Transaldolase~SPTR: Q7NFZ7 Transaldolase~TIGRFAM: transaldolase~PFAM: Transaldolase~TIGRFAM: transaldolase%2C mycobacterial type gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1769 Trad_1770 Trad_1770 Trad_1770 1904152 1904520 + conserved hypothetical protein%2C precursor KEGG: ddr:Deide_11471 conserved hypothetical protein%2C precursor~SPTR: C1CV36 Putative uncharacterized protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1770 Trad_1771 Trad_1771 Trad_1771 1904647 1905930 + histidyl-tRNA synthetase COGs: COG0124 Histidyl-tRNA synthetase~InterProIPR002314:IPR004154:IPR015807:IPR006195:IPR 004516~KEGG: ttj:TTHA0712 histidyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein~PRIAM: Histidine--tRNA ligase~SPTR: B7A666 Histidyl-tRNA synthetase~TIGRFAM: histidyl-tRNA synthetase~PFAM: Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: histidyl-tRNA synthetase gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1771 Trad_1772 Trad_1772 Trad_1772 1905927 1907759 + aspartyl-tRNA synthetase COGs: COG0173 Aspartyl-tRNA synthetase~InterProIPR002312:IPR004365:IPR004364:IPR004115:IPR 012340:IPR016027:IPR004524:IPR006195~KEGG: ttj:TTHA0711 aspartyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type%3B GAD domain protein~SPTR: P36419 Aspartyl-tRNA synthetase~TIGRFAM: aspartyl-tRNA synthetase~PFAM: GAD domain%3B tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: aspartyl-tRNA synthetase%2C bacterial type gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1772 Trad_1773 Trad_1773 Trad_1773 1907756 1908562 + HAD-superfamily hydrolase%2C subfamily IIB COGs: COG0561 hydrolase of the HAD superfamily~InterPro IPR013200:IPR006379~KEGG: ddr:Deide_11360 putative Cof protein (HAD-superfamily hydrolase)~PFAM: Haloacid dehalogenase domain protein hydrolase type 3~SPTR: C1CV24 Putative Cof protein (HAD-superfamily hydrolase)~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIB~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily%3B HAD-superfamily hydrolase%2C subfamily IIB gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1773 Trad_1774 Trad_1774 Trad_1774 1908609 1909919 + asparaginyl-tRNA synthetase COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase~InterProIPR002312:IPR004365:IPR004364:IPR016027:IPR 004522:IPR006195~KEGG: dge:Dgeo_1136 asparaginyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~PRIAM: Asparagine--tRNA ligase~SPTR: Q1IZA1 Asparaginyl-tRNA synthetase~TIGRFAM: asparaginyl-tRNA synthetase~PFAM: tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: asparaginyl-tRNA synthetase gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1774 Trad_1775 Trad_1775 Trad_1775 1909994 1910569 - hypothetical protein KEGG: mlo:mll5230 sarcosine oxidase alpha subunit~SPTR: Q98CA7 Sarcosine oxidase alpha subunit gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1775 Trad_1776 Trad_1776 Trad_1776 1910578 1911630 - peptidase M12A astacin InterPro IPR001506:IPR006026~KEGG: hypothetical protein~PFAM: peptidase M12A astacin~SMART: peptidase metallopeptidase~SPTR: A7SYQ4 Predicted protein (Fragment)~PFAM: Astacin (Peptidase family M12A) gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1776 Trad_1777 Trad_1777 Trad_1777 1912157 1912402 + prevent-host-death family protein InterPro IPR000834:IPR006442~KEGG: cti:pRALTA_0623 putative antitoxin of toxin-antitoxin system%2C phd type~SPTR: B2AJI9 Putative Antitoxin of toxin-antitoxin system%2C phd type~TIGRFAM: prevent-host-death family protein~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1777 Trad_1778 Trad_1778 Trad_1778 1912499 1912876 + PilT protein domain protein COGs: COG3744 conserved hypothetical protein~InterPro IPR002716~KEGG: ypi:YpsIP31758_3737 PilT domain-containing protein~PFAM: PilT protein domain protein~SPTR: A7FN63 PIN domain protein~PFAM: PIN domain gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1778 Trad_1779 Trad_1779 Trad_1779 1912893 1914788 - ABC transporter related protein COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains~InterPro IPR017871:IPR003439:IPR003593~KEGG: dge:Dgeo_0929 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q1IZV3 ATPase component of ABC transporter containing duplicated ATPase domain~PFAM: ABC transporter gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1779 Trad_1780 Trad_1780 Trad_1780 1914826 1915362 - flavodoxin/nitric oxide synthase COGs: COG4635 Flavodoxin~InterPro IPR008254~KEGG: ttr:Tter_2554 flavodoxin-like protein~PFAM: flavodoxin/nitric oxide synthase~SPTR: D1C958 Protoporphyrinogen oxidase gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1780 Trad_1781 Trad_1781 Trad_1781 1915665 1917086 - PA14 domain protein KEGG: bcv:Bcav_0957 PA14 domain protein~SPTR: C5C032 PA14 domain protein gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1781 Trad_1782 Trad_1782 Trad_1782 1917559 1918194 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032~KEGG: chl:Chy400_0025 two component transcriptional regulator%2C LuxR family~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~SPTR: B7AAT6 Two component transcriptional regulator%2C LuxR family~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1782 Trad_1783 Trad_1783 Trad_1783 1918406 1919128 - short-chain dehydrogenase/reductase SDR COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity~InterPro IPR002347:IPR002198:IPR016040~KEGG: ttj:TTHA0394 short chain dehydrogenase/reductase family oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C1XHX5 Short-chain alcohol dehydrogenase~PFAM: short chain dehydrogenase gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1783 Trad_1784 Trad_1784 Trad_1784 1919418 1920248 - hypothetical protein KEGG: cyn:Cyan7425_2917 hypothetical protein~SPTR: B8HL26 Putative uncharacterized protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1784 Trad_1785 Trad_1785 Trad_1785 1920258 1920758 - NAD(P)H dehydrogenase (quinone) COGs: COG4635 Flavodoxin~InterPro IPR003680:IPR008254~KEGG: rer:RER_34270 hypothetical protein~PFAM: NAD(P)H dehydrogenase (quinone)~SPTR: D1C958 Protoporphyrinogen oxidase gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1785 Trad_1786 Trad_1786 Trad_1786 1920755 1921153 - hypothetical protein KEGG: dhd:Dhaf_1267 hypothetical protein~SPTR: B8G1A9 Putative uncharacterized protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1786 Trad_1787 Trad_1787 Trad_1787 1921456 1921728 - conserved hypothetical protein KEGG: ach:Achl_0974 hypothetical protein~SPTR: B8HDG4 Putative uncharacterized protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1787 Trad_1788 Trad_1788 Trad_1788 1921840 1922367 - RDD domain containing protein COGs: COG1714 membrane protein/domain~InterPro IPR010432~KEGG: sat:SYN_02280 RDD family protein~PFAM: RDD domain containing protein~SPTR: Q2LQT9 Rdd family protein~PFAM: RDD family gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1788 Trad_1789 Trad_1789 Trad_1789 1922361 1923220 + Transposase-like protein COGs: COG3293 Transposase and inactivated derivatives~KEGG: dge:Dgeo_2686 putative IS1648 transposase~SPTR: Q1J315 Putative IS1648 transposase~manually curated~PFAM: Transposase DDE domain gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1789 Trad_1790 Trad_1790 Trad_1790 1923315 1924196 - conserved hypothetical protein KEGG: sth:STH2090 hypothetical protein~SPTR: Q67ML8 Putative uncharacterized protein~PFAM: Predicted membrane protein (DUF2154) gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1790 Trad_1791 Trad_1791 Trad_1791 1924200 1924868 - conserved hypothetical protein KEGG: rca:Rcas_0430 hypothetical protein~SPTR: B7A9X1 Putative uncharacterized protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1791 Trad_1792 Trad_1792 Trad_1792 1924905 1925333 - hypothetical protein KEGG: bcv:Bcav_2131 hypothetical protein~SPTR: C1XQG7 Putative uncharacterized protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1792 Trad_1793 Trad_1793 Trad_1793 1925373 1925789 - putative signal transduction protein with CBS domains COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains~InterPro IPR000644~KEGG: sul:SYO3AOP1_0695 putative signal-transduction protein with CBS domains~PFAM: CBS domain containing protein~SMART: CBS domain containing protein~SPTR: B2V8Q8 Putative signal-transduction protein with CBS domains~PFAM: CBS domain gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1793 Trad_1794 Trad_1794 Trad_1794 1925892 1926881 - zinc-binding alcohol dehydrogenase family protein COGs: COG1064 Zn-dependent alcohol dehydrogenase~InterPro IPR013154:IPR011032:IPR016040:IPR014187~KEGG: tro:trd_0582 NAD-dependent alcohol dehydrogenase~PFAM: Alcohol dehydrogenase GroES domain protein~SPTR: B9KYN5 NAD-dependent alcohol dehydrogenase~TIGRFAM: zinc-binding alcohol dehydrogenase family protein~PFAM: Alcohol dehydrogenase GroES-like domain~TIGRFAM: zinc-binding alcohol dehydrogenase family protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1794 Trad_1795 Trad_1795 Trad_1795 1926908 1927354 - UspA domain protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006015:IPR006016:IPR014729~KEGG: ttj:TTHA0295 universal stress protein UspA-like protein~PFAM: UspA domain protein~SPTR: C1XRI9 Universal stress protein UspA-like protein~PFAM: Universal stress protein family gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1795 Trad_1796 Trad_1796 Trad_1796 1927500 1929311 - PAS/PAC sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterProIPR004358:IPR013656:IPR011712:IPR003594:IPR 000014:IPR001610:IPR005467:IPR000700~KEGG: rxy:Rxyl_0093 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerisation and phosphoacceptor region%3B PAS fold-4 domain protein~SMART: ATP-binding region ATPase domain protein%3B PAS domain containing protein%3B PAC repeat-containing protein~SPTR: B7AAT7 Histidine kinase~TIGRFAM: PAS sensor protein~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1796 Trad_1797 Trad_1797 Trad_1797 1929392 1929769 - globin COGs: COG2346 Truncated hemoglobins~InterPro IPR001486:IPR012292:IPR009050~KEGG: mjl:Mjls_4891 globin~PFAM: globin~SPTR: Q1B3C2 Globin~PFAM: Bacterial-like globin gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1797 Trad_1798 Trad_1798 Trad_1798 1929787 1930308 - flavodoxin/nitric oxide synthase COGs: COG4635 Flavodoxin~InterPro IPR008254~KEGG: ttr:Tter_2554 flavodoxin-like protein~PFAM: flavodoxin/nitric oxide synthase~SPTR: D1C958 Protoporphyrinogen oxidase gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1798 Trad_1799 Trad_1799 Trad_1799 1930308 1932710 - phosphoenolpyruvate synthase COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase~InterProIPR006318:IPR000121:IPR002192:IPR008279:IPR 013815:IPR015813:IPR006319~KEGG: rxy:Rxyl_3073 phosphoenolpyruvate synthase~PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding%3B PEP-utilising protein mobile region%3B PEP-utilizing protein~SPTR: Q1ARJ7 Phosphoenolpyruvate synthase~TIGRFAM: phosphoenolpyruvate synthase~PFAM: PEP-utilising enzyme%2C mobile domain%3B PEP-utilising enzyme%2C TIM barrel domain%3B Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain~TIGRFAM: phosphoenolpyruvate synthase gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1799 Trad_1800 Trad_1800 Trad_1800 1932903 1933712 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR016040~KEGG: kra:Krad_4023 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: A6WF97 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1800 Trad_1801 Trad_1801 Trad_1801 1934248 1935585 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: hor:Hore_20870 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: B8CZY0 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1801 Trad_1802 Trad_1802 Trad_1802 1935757 1936890 - Cysteine desulfurase COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase~InterProIPR020578:IPR000192:IPR015421:IPR015424:IPR 016454~KEGG: ttj:TTHA0456 cysteine desulfurase/cysteine sulfinate desulfinase~PFAM: aminotransferase class V~PRIAM: Cysteine desulfurase~SPTR: C1XK46 Cysteine desulfurase family protein~PFAM: Aminotransferase class-V gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1802 Trad_1803 Trad_1803 Trad_1803 1937113 1937562 - transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: ttj:TTHA0455 rrf2 family protein%2C transcriptional regulator~PFAM: protein of unknown function UPF0074~SPTR: B7A832 Transcriptional regulator%2C BadM/Rrf2 family~TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: Transcriptional regulator~TIGRFAM: rrf2 family protein (putative transcriptional regulator) gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1803 Trad_1804 Trad_1804 Trad_1804 1937655 1938011 - response regulator receiver protein InterPro IPR001789:IPR011006~KEGG: ote:Oter_0318 two component transcriptional regulator~PFAM: response regulator receiver~SPTR: A9D5A2 Osmolarity response regulator~PFAM: Response regulator receiver domain gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1804 Trad_1805 Trad_1805 Trad_1805 1938177 1939250 + conserved hypothetical protein KEGG: gvi:gll0047 hypothetical protein~SPTR: Q7NPK8 Gll0047 protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1805 Trad_1806 Trad_1806 Trad_1806 1939309 1940118 - hypothetical protein InterPro IPR011044~KEGG: hypothetical protein~SPTR: Q5ATB2 Putative uncharacterized protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1806 Trad_1807 Trad_1807 Trad_1807 1941414 1941605 + conserved hypothetical protein KEGG: cno:NT01CX_0351 hypothetical protein~SPTR: A0Q2J1 Putative uncharacterized protein gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1807 Trad_1808 Trad_1808 Trad_1808 1941627 1942316 + hypothetical protein KEGG: mjl:Mjls_3911 hypothetical protein~SPTR: A3Q3F9 Putative uncharacterized protein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1808 Trad_1809 Trad_1809 Trad_1809 1943109 1944143 + pseudogene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1809 Trad_1810 Trad_1810 Trad_1810 1944780 1945601 + conserved hypothetical protein COGs: COG4983 conserved hypothetical protein~KEGG: hla:Hlac_3173 hypothetical protein~SPTR: B9LVJ6 Putative uncharacterized protein~PFAM: Bifunctional DNA primase/polymerase%2C N-terminal gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1810 Trad_1811 Trad_1811 Trad_1811 1945963 1946841 - integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR002104:IPR013762:IPR011010:IPR010998~KEGG: drm:Dred_0370 phage integrase family protein~PFAM: integrase family protein~SPTR: A4J1G5 Phage integrase family protein~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1811 Trad_1812 Trad_1812 Trad_1812 1946957 1947631 - hypothetical protein InterPro IPR015943:IPR011044~KEGG: tcu:Tcur_1746 serine/threonine protein kinase with WD40 repeats~SPTR: D1AC54 Serine/threonine protein kinase with WD40 repeats gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1812 Trad_1813 Trad_1813 Trad_1813 1947782 1950328 - alpha-glucan phosphorylase COGs: COG0058 Glucan phosphorylase~InterPro IPR011834:IPR000811~KEGG: rrs:RoseRS_4181 alpha-glucan phosphorylase~PRIAM: Phosphorylase~SPTR: A5V0X2 Alpha-glucan phosphorylase~TIGRFAM: alpha-glucan phosphorylase~PFAM: Carbohydrate phosphorylase%3B Protein of unknown function (DUF3417)~TIGRFAM: alpha-glucan phosphorylases gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1813 Trad_1814 Trad_1814 Trad_1814 1950611 1951594 + hypothetical protein KEGG: rci:RRC32 hypothetical protein~SPTR: Q0W1C5 Putative uncharacterized protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1814 Trad_1815 Trad_1815 Trad_1815 1951633 1952772 - PEGA domain protein InterPro IPR013229~KEGG: ttj:TTHA1766 S-layer-like protein~PFAM: PEGA domain protein~SPTR: B7A5V3 PEGA domain protein~PFAM: PEGA domain gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1815 Trad_1816 Trad_1816 Trad_1816 1952826 1953596 + metallophosphoesterase InterPro IPR004843:IPR011152~KEGG: dra:DR_2331 hypothetical protein~PFAM: metallophosphoesterase~SPTR: Q9RRZ8 Putative uncharacterized protein~PFAM: Calcineurin-like phosphoesterase gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1816 Trad_1817 Trad_1817 Trad_1817 1953593 1954534 + DNA polymerase III subunit%2C putative COGs: COG2812 DNA polymerase III gamma/tau subunits~KEGG: dge:Dgeo_2262 DNA polymerase III subunit%2C putative~SPTR: C1XJM6 Putative uncharacterized protein gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1817 Trad_1818 Trad_1818 Trad_1818 1954531 1954803 - hypothetical protein KEGG: cro:ROD_02191 ribonuclease HI~SPTR: D0ZL15 Ribonuclease H gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1818 Trad_1819 Trad_1819 Trad_1819 1954933 1955808 + deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase~InterPro IPR002915:IPR013785~KEGG: ttr:Tter_2531 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~SPTR: D1CI49 Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DeoC/LacD family aldolase gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1819 Trad_1820 Trad_1820 Trad_1820 1955805 1956950 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR016040~KEGG: ttr:Tter_2532 oxidoreductase domain protein~PFAM: oxidoreductase domain protein~SPTR: D1CI50 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1820 Trad_1821 Trad_1821 Trad_1821 1956947 1958107 + PfkB domain protein COGs: COG0524 Sugar kinase ribokinase family~InterPro IPR011611~KEGG: rxy:Rxyl_2598 PfkB~PFAM: PfkB domain protein~SPTR: Q1ASW3 PfkB~PFAM: pfkB family carbohydrate kinase gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1821 Trad_1822 Trad_1822 Trad_1822 1958599 1958814 + lysophospholipase L1 and related esterase-like protein KEGG: sro:Sros_4395 lysophospholipase L1 and related esterase-like protein~SPTR: C4ENY3 Lysophospholipase L1-like esterase gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1822 Trad_1823 Trad_1823 Trad_1823 1958824 1959795 + conserved hypothetical protein KEGG: mac:MA1993 hypothetical protein~SPTR: Q8TPC0 Predicted protein gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1823 Trad_1824 Trad_1824 Trad_1824 1960068 1960456 + pseudogene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1824 Trad_1825 Trad_1825 Trad_1825 1960519 1962594 - conserved hypothetical protein KEGG: art:Arth_3891 hypothetical protein~SPTR: C1WM82 Putative uncharacterized protein~TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1825 Trad_1826 Trad_1826 Trad_1826 1962660 1963568 - glycosidase-related protein COGs: COG2152 glycosylase~InterPro IPR007184~KEGG: tte:TTE0063 glycosylase~PFAM: glycosidase PH1107-related~SPTR: Q8RDG9 Predicted glycosylase~PFAM: Domain of unknown function (DUF377) gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1826 Trad_1827 Trad_1827 Trad_1827 1963558 1964634 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761:IPR010982~KEGG: hau:Haur_0297 LacI family transcription regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: B4V9B2 CEBR protein~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1827 Trad_1828 Trad_1828 Trad_1828 1964726 1965604 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: gwc:GWCH70_1465 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C5DAG2 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1828 Trad_1829 Trad_1829 Trad_1829 1965591 1966475 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: gtn:GTNG_3205 sugar ABC transporter (permease)~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A4IT96 Sugar ABC transporter (Permease)~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1829 Trad_1830 Trad_1830 Trad_1830 1966479 1967744 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: gwc:GWCH70_1463 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: C5DAG0 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1830 Trad_1831 Trad_1831 Trad_1831 1967935 1969284 + HI0933 family protein COGs: COG2081 flavoprotein~InterPro IPR004792:IPR013027~KEGG: npu:Npun_F4431 hypothetical protein~PFAM: HI0933 family protein~SPTR: A0YTD1 Fumarate reductase/succinate dehydrogenase flavoprotein-like protein~PFAM: HI0933-like protein~TIGRFAM: conserved hypothetical protein TIGR00275 gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1831 Trad_1832 Trad_1832 Trad_1832 1969336 1970349 + aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395:IPR020471:IPR018170~KEGG: hoh:Hoch_6537 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: D0LRL4 Aldo/keto reductase~PFAM: Aldo/keto reductase family gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1832 Trad_1833 Trad_1833 Trad_1833 1970537 1971244 - transcriptional regulator%2C GntR family COGs: COG1802 Transcriptional regulators~InterPro IPR000524:IPR011991:IPR011711~KEGG: ttr:Tter_1104 transcriptional regulator%2C GntR family~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: D1CB55 Transcriptional regulator%2C GntR family~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1833 Trad_1834 Trad_1834 Trad_1834 1971310 1972152 - Xylose isomerase domain protein TIM barrel COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR013022:IPR012307~KEGG: gym:GYMC10_3145 xylose isomerase domain protein TIM barrel~PFAM: Xylose isomerase domain protein TIM barrel~SPTR: A7NLZ1 Xylose isomerase domain protein TIM barrel~PFAM: Xylose isomerase-like TIM barrel gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1834 Trad_1835 Trad_1835 Trad_1835 1972149 1973321 - protein of unknown function DUF993 InterPro IPR009334~KEGG: rrs:RoseRS_2854 hypothetical protein~PFAM: protein of unknown function DUF993~SPTR: A5UX69 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF993) gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1835 Trad_1836 Trad_1836 Trad_1836 1973318 1974469 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683~KEGG: rca:Rcas_2457 oxidoreductase domain-containing protein~PFAM: oxidoreductase domain protein~SPTR: A7NLY9 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1836 Trad_1837 Trad_1837 Trad_1837 1974568 1975701 - Mandelate racemase/muconate lactonizing protein COGs: COG4948 L-alanine-DL-glutamate epimerase~InterPro IPR013341:IPR013342~KEGG: ttr:Tter_1929 mandelate racemase/muconate lactonizing protein~PFAM: Mandelate racemase/muconate lactonizing protein~SPTR: A9LGV7 Chloromuconate cycloisomerase~PFAM: Mandelate racemase / muconate lactonizing enzyme%2C C-terminal domain%3B Mandelate racemase / muconate lactonizing enzyme%2C N-terminal domain gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1837 Trad_1838 Trad_1838 Trad_1838 1975847 1977802 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: rle:pRL100276 putative substrate-binding component of ABC transporter~PFAM: extracellular solute-binding protein family 5~SPTR: Q1M7M8 Putative substrate-binding component of ABC transporter~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1838 Trad_1839 Trad_1839 Trad_1839 1978105 1980030 - conserved hypothetical protein KEGG: rca:Rcas_2446 hypothetical protein~SPTR: A7NLX8 Putative uncharacterized protein gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1839 Trad_1840 Trad_1840 Trad_1840 1980036 1981208 - Oligogalacturonide lyase InterPro IPR011659~KEGG: rca:Rcas_2370 oligogalacturonide lyase~PFAM: WD40 domain protein beta Propeller~PRIAM: Oligogalacturonide lyase~SPTR: A7NLQ6 Oligogalacturonide lyase~PFAM: WD40-like Beta Propeller Repeat gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1840 Trad_1841 Trad_1841 Trad_1841 1981273 1982607 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683:IPR004104~KEGG: gym:GYMC10_0470 oxidoreductase domain protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: A6PTT8 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1841 Trad_1842 Trad_1842 Trad_1842 1982609 1983691 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683:IPR004104~KEGG: rca:Rcas_2441 oxidoreductase domain-containing protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: A7NLX3 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1842 Trad_1843 Trad_1843 Trad_1843 1983850 1985106 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683~KEGG: tma:TM0426 PHT4-related protein~PFAM: oxidoreductase domain protein~SPTR: A6PSV6 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1843 Trad_1844 Trad_1844 Trad_1844 1985164 1988451 + hypothetical protein KEGG: ate:Athe_2076 glycoside hydrolase family 2 sugar binding~SPTR: B9MLG3 Glycoside hydrolase family 2 sugar binding~manually curated gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1844 Trad_1845 Trad_1845 Trad_1845 1988864 1989934 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683:IPR004104~KEGG: bcl:ABC3277 dehydrogenase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: C6J0A2 Dehydrogenase~PFAM: Oxidoreductase family%2C C-terminal alpha/beta domain%3B Oxidoreductase family%2C NAD-binding Rossmann fold gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1845 Trad_1846 Trad_1846 Trad_1846 1989958 1990983 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683:IPR004104~KEGG: ttr:Tter_0217 oxidoreductase domain protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: D1CDY3 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C C-terminal alpha/beta domain%3B Oxidoreductase family%2C NAD-binding Rossmann fold gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1846 Trad_1847 Trad_1847 Trad_1847 1990986 1992119 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683:IPR004104~KEGG: rrs:RoseRS_2680 oxidoreductase domain-containing protein~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: A5UWQ1 Oxidoreductase domain protein~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1847 Trad_1848 Trad_1848 Trad_1848 1992119 1992955 - Xylose isomerase domain protein TIM barrel COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR013022:IPR012307:IPR011418~KEGG: pjd:Pjdr2_4947 xylose isomerase domain protein TIM barrel~PFAM: Xylose isomerase domain protein TIM barrel%3B AP endonuclease 2 domain protein~SPTR: C6J0A3 Xylose isomerase domain-containing protein~PFAM: Xylose isomerase-like TIM barrel gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1848 Trad_1849 Trad_1849 Trad_1849 1993162 1994265 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterProIPR003593:IPR010066:IPR003439:IPR013563:IPR 017871~KEGG: rle:pRL100280 putative ATP-binding ABC transporter~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: Q1M7M4 Putative ATP-binding ABC transporter~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1849 Trad_1850 Trad_1850 Trad_1850 1994262 1995329 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterProIPR003593:IPR010066:IPR003439:IPR013563:IPR 017871~KEGG: rca:Rcas_2451 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: A7NLY3 Oligopeptide/dipeptide ABC transporter%2C ATPase subunit~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1850 Trad_1851 Trad_1851 Trad_1851 1995365 1996627 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: rle:pRL100278 putative permease component of ABC transporter~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B6YYM1 Oligopeptide ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1851 Trad_1852 Trad_1852 Trad_1852 1996638 1997624 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: rle:pRL100277 putative permease component of ABC transporter~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1M7M7 Putative permease component of ABC transporter~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1852 Trad_1853 Trad_1853 Trad_1853 1997828 1998961 - rRNA (guanine-N(2)-)-methyltransferase COGs: COG2813 16S RNA G1207 methylase RsmC~InterPro IPR007848:IPR002052~KEGG: ddr:Deide_14390 putative rRNA (guanine-N(2)-)-methyltransferase~PFAM: methyltransferase small~PRIAM: rRNA (guanine-N(2)-)-methyltransferase~SPTR: C1CW23 Putative rRNA (Guanine-N(2)-)-methyltransferase~PFAM: Methyltransferase small domain gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1853 Trad_1854 Trad_1854 Trad_1854 1999032 2000078 + metalloendopeptidase%2C glycoprotease family COGs: COG0533 Metal-dependent protease with possible chaperone activity~InterPro IPR017861:IPR000905~KEGG: ttj:TTHA1252 putative DNA-binding/iron metalloprotein/AP endonuclease~PFAM: peptidase M22 glycoprotease~PRIAM: O-sialoglycoprotein endopeptidase~SPTR: C1XUB8 O-sialoglycoprotein endopeptidase~TIGRFAM: metalloendopeptidase%2C glycoprotease family~PFAM: Glycoprotease family~TIGRFAM: metalloendopeptidase%2C putative%2C glycoprotease family gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1854 Trad_1855 Trad_1855 Trad_1855 2000012 2001181 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296:IPR000792~KEGG: dge:Dgeo_1099 glycosyl transferase%2C group 1~PFAM: glycosyl transferase group 1~SPTR: Q1IZD7 Glycosyl transferase%2C group 1~PFAM: Glycosyl transferases group 1 gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1855 Trad_1856 Trad_1856 Trad_1856 2001425 2002264 + conserved hypothetical protein KEGG: mxa:MXAN_3119 hypothetical protein~SPTR: Q1D7Q1 Putative uncharacterized protein gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1856 Trad_1857 Trad_1857 Trad_1857 2002257 2003051 - conserved hypothetical protein KEGG: ddr:Deide_22140 hypothetical protein~SPTR: B7A5V5 Putative uncharacterized protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1857 Trad_1858 Trad_1858 Trad_1858 2003239 2004489 - PEGA domain protein InterPro IPR013784:IPR013229~KEGG: ttj:TTHA1766 S-layer-like protein~PFAM: PEGA domain protein~SPTR: C1XNT2 PEGA domain-containing protein~PFAM: PEGA domain gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1858 Trad_1859 Trad_1859 Trad_1859 2004723 2005454 + hypothetical protein KEGG: dge:Dgeo_1553 hypothetical protein~SPTR: Q9RUL4 Putative uncharacterized protein gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1859 Trad_1860 Trad_1860 Trad_1860 2005508 2006905 - fumarate hydratase%2C class II COGs: COG0114 Fumarase~InterProIPR005677:IPR008948:IPR000362:IPR018951:IPR 020557~KEGG: paa:Paes_0904 fumarate hydratase%2C class II~PFAM: fumarate lyase%3B Fumarase C-like~SPTR: A1ZEG0 Fumarate hydratase%2C class II~TIGRFAM: fumarate hydratase%2C class II~PFAM: Fumarase C C-terminus%3B Lyase~TIGRFAM: fumarate hydratase%2C class II gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1860 Trad_1861 Trad_1861 Trad_1861 2006992 2007708 - hypothetical protein KEGG: ddr:Deide_22240 conserved hypothetical protein%2C precursor~SPTR: Q1IW67 PPC%2C peptidase containing PKD repeats gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1861 Trad_1862 Trad_1862 Trad_1862 2007760 2008152 - PilT protein domain protein COGs: COG3744 conserved hypothetical protein~InterPro IPR002716~KEGG: ava:Ava_0767 PilT protein-like~PFAM: PilT protein domain protein~SPTR: Q3MF45 PilT protein-like~PFAM: PIN domain gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1862 Trad_1863 Trad_1863 Trad_1863 2008149 2008373 - conserved hypothetical protein KEGG: npu:Npun_F4199 hypothetical protein~SPTR: B2J8T6 Putative uncharacterized protein gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1863 Trad_1864 Trad_1864 Trad_1864 2008383 2008712 - DNA polymerase beta domain protein region KEGG: rmr:Rmar_0551 DNA polymerase beta domain protein region~SPTR: D0MF02 DNA polymerase beta domain protein region~PFAM: Nucleotidyltransferase domain gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1864 Trad_1865 Trad_1865 Trad_1865 2008699 2009721 - putative esterase COGs: COG2382 Enterochelin esterase~InterPro IPR000801~KEGG: ddr:Deide_04260 putative enterochelin esterase~PFAM: putative esterase~SPTR: C1XXP9 Enterochelin esterase-like enzyme~PFAM: Putative esterase gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1865 Trad_1866 Trad_1866 Trad_1866 2009779 2010957 + aminotransferase class I and II COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities~InterPro IPR015424:IPR015421:IPR001176:IPR004839~KEGG: kol:Kole_0146 aminotransferase class I and II~PFAM: aminotransferase class I and II~SPTR: C1XVE0 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities~PFAM: Aminotransferase class I and II gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1866 Trad_1867 Trad_1867 Trad_1867 2010950 2011636 + Uracil-DNA glycosylase superfamily COGs: COG1573 Uracil-DNA glycosylase~InterPro IPR005122~KEGG: ade:Adeh_3631 uracil-DNA glycosylase superfamily protein~PFAM: Uracil-DNA glycosylase superfamily~SPTR: C1XVE5 Uracil-DNA glycosylase~PFAM: Uracil DNA glycosylase superfamily~TIGRFAM: uracil-DNA glycosylase%2C family 4 gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1867 Trad_1868 Trad_1868 Trad_1868 2011998 2012579 + transferase hexapeptide repeat containing protein COGs: COG1045 Serine acetyltransferase~InterPro IPR011004:IPR001451~KEGG: gsu:GSU1960 hexapeptide transferase family protein~PFAM: transferase hexapeptide repeat containing protein~SPTR: Q74BU4 Hexapeptide transferase family protein~PFAM: Bacterial transferase hexapeptide (three repeats) gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1868 Trad_1869 Trad_1869 Trad_1869 2012622 2013785 + rRNA (guanine-N(2)-)-methyltransferase COGs: COG1092 SAM-dependent methyltransferase~KEGG: hau:Haur_2998 hypothetical protein~PRIAM: rRNA (guanine-N(2)-)-methyltransferase~SPTR: A9B3R4 Putative uncharacterized protein~PFAM: S-adenosylmethionine-dependent methyltransferase gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1869 Trad_1870 Trad_1870 Trad_1870 2013858 2014706 - alpha/beta hydrolase fold protein COGs: COG2267 Lysophospholipase~InterPro IPR000073~KEGG: sal:Sala_0197 acylglycerol lipase~PFAM: alpha/beta hydrolase fold~SPTR: Q1GWQ1 Acylglycerol lipase~PFAM: Putative lysophospholipase gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1870 Trad_1871 Trad_1871 Trad_1871 2014884 2015345 + NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR015797:IPR000086:IPR020476:IPR020084~KEGG: syn:sll1537 hypothetical protein~PFAM: NUDIX hydrolase~SPTR: C1XV90 ADP-ribose pyrophosphatase~PFAM: NUDIX domain gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1871 Trad_1872 Trad_1872 Trad_1872 2015336 2016046 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR016040:IPR002347:IPR002198~KEGG: ttj:TTHA0461 dihydropteridine/dihydrofolate reductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C1XV89 Dihydropteridine reductase~PFAM: short chain dehydrogenase gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1872 Trad_1873 Trad_1873 Trad_1873 2016108 2017304 + 3-dehydroquinate synthase COGs: COG0337 3-dehydroquinate synthetase~InterPro IPR016303:IPR002658~KEGG: dge:Dgeo_2474 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase~PRIAM: 3-dehydroquinate synthase~SPTR: Q1J3M6 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1873 Trad_1874 Trad_1874 Trad_1874 2017265 2017585 + conserved hypothetical protein KEGG: hau:Haur_1554 hypothetical protein~SPTR: A9B4N2 Putative uncharacterized protein gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1874 Trad_1875 Trad_1875 Trad_1875 2017597 2018436 + TatD-related deoxyribonuclease COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold~InterPro IPR012022:IPR001130~KEGG: dge:Dgeo_2472 TatD-related deoxyribonuclease~PFAM: TatD-related deoxyribonuclease~SPTR: Q1J3M8 TatD-related deoxyribonuclease~PFAM: TatD related DNase gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1875 Trad_1876 Trad_1876 Trad_1876 2018753 2019181 - transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: plu:plu4843 IS200 family transposase~PFAM: transposase IS200-family protein~SPTR: Q7M7F4 Transposase%2C IS200 Familly~PFAM: Transposase IS200 like gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1876 Trad_1877 Trad_1877 Trad_1877 2019280 2020473 + Xylose isomerase domain protein TIM barrel InterPro IPR012307~KEGG: dge:Dgeo_2471 hypothetical protein~PFAM: Xylose isomerase domain protein TIM barrel~SPTR: Q1J3M9 Sugar phosphate isomerase family enzyme gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1877 Trad_1878 Trad_1878 Trad_1878 2020540 2021271 + Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: rxy:Rxyl_0952 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: Q1AXF9 Methyltransferase type 11~PFAM: Methyltransferase domain gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1878 Trad_1879 Trad_1879 Trad_1879 2021373 2021633 + Transglycosylase-associated protein InterPro IPR007341~KEGG: sti:Sthe_0065 transglycosylase-associated protein~PFAM: Transglycosylase-associated protein~SPTR: Q1D2M1 Putative membrane protein~PFAM: Transglycosylase associated protein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1879 Trad_1880 Trad_1880 Trad_1880 2022237 2023157 + Proline dehydrogenase COGs: COG0506 Proline dehydrogenase~InterPro IPR008219:IPR002872~KEGG: dra:DR_0814 proline dehydrogenase%2C putative~PFAM: Proline dehydrogenase~PRIAM: Proline dehydrogenase~SPTR: Q9RW55 Proline dehydrogenase%2C putative~PFAM: Proline dehydrogenase gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1880 Trad_1881 Trad_1881 Trad_1881 2023225 2024778 + delta-1-pyrroline-5-carboxylate dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterProIPR005932:IPR016161:IPR016162:IPR015590:IPR 016160~KEGG: gtn:GTNG_0169 1-pyrroline-5-carboxylate dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: C1XH35 Delta-1-pyrroline-5-carboxylate dehydrogenase~TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase~PFAM: Aldehyde dehydrogenase family~TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase%2C group 2%2C putative gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1881 Trad_1882 Trad_1882 Trad_1882 2024835 2025689 + DNA polymerase beta domain protein region InterPro IPR002934~KEGG: scl:sce6875 hypothetical protein~PFAM: DNA polymerase beta domain protein region~SPTR: A9GU72 Putative uncharacterized protein~PFAM: Nucleotidyltransferase domain gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1882 Trad_1883 Trad_1883 Trad_1883 2025709 2026422 - ABC transporter related protein COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: dar:Daro_4099 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XFF0 ABC-type branched-chain amino acid transport systems%2C ATPase component~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1883 Trad_1884 Trad_1884 Trad_1884 2026422 2028257 - ABC transporter related protein COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003593:IPR003439:IPR001851~KEGG: tth:TTC0599 branched-chain amino acid transport system permease protein LivM/branched-chain amino acid transport ATP-binding protein LivG~PFAM: ABC transporter related%3B inner-membrane translocator~SMART: AAA ATPase~SPTR: C1XPX6 ABC-type branched-chain amino acid transport systems%2C ATPase component~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter%3B Branched-chain amino acid transport system / permease component gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1884 Trad_1885 Trad_1885 Trad_1885 2028254 2029261 - inner-membrane translocator COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components~InterPro IPR001851~KEGG: tth:TTC0598 branched-chain amino acid transport system permease protein LivH~PFAM: inner-membrane translocator~SPTR: C1XFE8 Branched-chain amino acid ABC-type transport system%2C permease component~PFAM: Branched-chain amino acid transport system / permease component gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1885 Trad_1886 Trad_1886 Trad_1886 2029301 2030491 - Extracellular ligand-binding receptor COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828~KEGG: tth:TTC0597 leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein~PFAM: Extracellular ligand-binding receptor~SPTR: B7A763 Extracellular ligand-binding receptor~PFAM: Receptor family ligand binding region gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1886 Trad_1887 Trad_1887 Trad_1887 2030617 2031597 - 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase InterPro IPR011981:IPR004360:IPR000486~KEGG: rlt:Rleg2_4442 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: A0NXR6 Extradiol ring-cleavage dioxygenase:Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I~TIGRFAM: 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily~TIGRFAM: 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1887 Trad_1888 Trad_1888 Trad_1888 2031599 2033074 - 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase subunit COGs: COG2368 Aromatic ring hydroxylase~InterPro IPR012687:IPR004925:IPR006091:IPR013764~KEGG: dge:Dgeo_2418 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component~PFAM: 4-hydroxyphenylacetate 3-hydroxylase~PRIAM: Vinylacetyl-CoA Delta-isomerase~SPTR: Q1J3T2 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component~TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase subunit~PFAM: 4-hydroxyphenylacetate 3-hydroxylase N terminal%3B 4-hydroxyphenylacetate 3-hydroxylase C terminal~TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1888 Trad_1889 Trad_1889 Trad_1889 2033064 2033579 - GCN5-related N-acetyltransferase InterPro IPR016181:IPR000182~KEGG: smt:Smal_0855 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: B4SLQ0 GCN5-related N-acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1889 Trad_1890 Trad_1890 Trad_1890 2033589 2035103 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterProIPR011985:IPR016161:IPR016162:IPR015590:IPR 016160~KEGG: dge:Dgeo_2416 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: Q1J3T4 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase~TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase~PFAM: Aldehyde dehydrogenase family~TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1890 Trad_1891 Trad_1891 Trad_1891 2035100 2035534 - hypothetical protein KEGG: reh:H16_A0283 hypothetical protein~SPTR: C1XPY4 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3293) gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1891 Trad_1892 Trad_1892 Trad_1892 2035531 2036319 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2CHpaG2 subunit COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway)~InterPro IPR012684:IPR011234:IPR002529~KEGG: dge:Dgeo_2413 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase~PFAM: fumarylacetoacetate (FAA) hydrolase~PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase~SPTR: C1XPY5 5-carboxy-2-oxohept-3-enedioate decarboxylase HpaG2 subunit~TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2CHpaG2 subunit~PFAM: Fumarylacetoacetate (FAA) hydrolase family~TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C C-terminal subunit gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1892 Trad_1893 Trad_1893 Trad_1893 2036316 2037221 - dihydrodipicolinate synthase COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase~InterPro IPR005263:IPR013785:IPR002220:IPR020625~KEGG: aac:Aaci_0341 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase~PFAM: dihydrodipicolinate synthetase~SPTR: C8WRJ5 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase~TIGRFAM: dihydrodipicolinate synthase~PFAM: Dihydrodipicolinate synthetase family~TIGRFAM: 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase%3B dihydrodipicolinate synthase gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1893 Trad_1894 Trad_1894 Trad_1894 2037464 2037853 + phenylacetic acid degradation protein PaaD COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism~InterPro IPR003736:IPR011973:IPR006683~KEGG: tth:TTC0601 phenylacetic acid degradation protein~PFAM: thioesterase superfamily protein~SPTR: C1XPX4 Phenylacetic acid degradation protein PaaD~TIGRFAM: phenylacetic acid degradation protein PaaD~PFAM: Thioesterase superfamily~TIGRFAM: uncharacterized domain 1%3B phenylacetic acid degradation protein PaaD gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1894 Trad_1895 Trad_1895 Trad_1895 2038046 2039377 + Phenylacetate--CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: tth:TTC0602 phenylacetyl-CoA ligase~PFAM: AMP-dependent synthetase and ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: C1XFF4 Phenylacetate-CoA ligase~PFAM: AMP-binding enzyme~TIGRFAM: phenylacetate-CoA ligase gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1895 Trad_1896 Trad_1896 Trad_1896 2039374 2039496 + hypothetical protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1896 Trad_1897 Trad_1897 Trad_1897 2039493 2039933 + conserved hypothetical protein COGs: COG5496 thioesterase~KEGG: ttj:TTHA0967 hypothetical protein~SPTR: C1XPX1 Thioesterase superfamily gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1897 Trad_1898 Trad_1898 Trad_1898 2039995 2042079 + phenylacetic acid degradation protein paaN COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterProIPR011966:IPR016161:IPR016162:IPR015590:IPR 002539~KEGG: dge:Dgeo_1913 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase~PFAM: MaoC domain protein dehydratase%3B Aldehyde Dehydrogenase~SPTR: C1XT04 Phenylacetic acid degradation protein paaN~TIGRFAM: phenylacetic acid degradation protein paaN~PFAM: MaoC like domain%3B Aldehyde dehydrogenase family~TIGRFAM: phenylacetic acid degradation protein paaN gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1898 Trad_1899 Trad_1899 Trad_1899 2042161 2042700 + GCN5-related N-acetyltransferase COGs: COG1247 Sortase and related acyltransferase~InterPro IPR016181:IPR000182~KEGG: rxy:Rxyl_1661 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: D1C9G7 GCN5-related N-acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1899 Trad_1900 Trad_1900 Trad_1900 2042836 2043348 - cytochrome c class I InterPro IPR009056:IPR003088~KEGG: dge:Dgeo_0810 cytochrome c%2C class I~PFAM: cytochrome c class I~SPTR: C1XTX3 Cytochrome c553~PFAM: Cytochrome c gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1900 Trad_1901 Trad_1901 Trad_1901 2043439 2044278 - phosphate ABC transporter%2C ATPase subunit COGs: COG1117 ABC-type phosphate transport system ATPase component~InterProIPR003593:IPR005670:IPR003439:IPR015850:IPR 017871~KEGG: dge:Dgeo_0652 phosphate ABC transporter permease~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XWF0 Phosphate ABC transporter ATP-binding protein~TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter~TIGRFAM: phosphate ABC transporter%2C ATP-binding protein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1901 Trad_1902 Trad_1902 Trad_1902 2044275 2045126 - phosphate ABC transporter%2C inner membrane subunit PstA COGs: COG0581 ABC-type phosphate transport system permease component~InterPro IPR005672:IPR000515~KEGG: dra:DR_A0159 phosphate ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q9RYZ4 Phosphate ABC transporter%2C permease protein~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstA gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1902 Trad_1903 Trad_1903 Trad_1903 2045123 2046115 - phosphate ABC transporter%2C inner membrane subunit PstC COGs: COG0573 ABC-type phosphate transport system permease component~InterPro IPR011864:IPR000515~KEGG: dge:Dgeo_0650 phosphate ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1J0N2 ABC-type phosphate transport system%2C permease component~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstC gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1903 Trad_1904 Trad_1904 Trad_1904 2046309 2047352 - phosphate ABC transporter%2C periplasmic phosphate-binding protein COGs: COG0226 ABC-type phosphate transport system periplasmic component~InterPro IPR005673:IPR006059~KEGG: dge:Dgeo_0649 periplasmic phosphate binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q1J0N3 ABC-type phosphate transport system%2C periplasmic component%2C PstS~TIGRFAM: phosphate ABC transporter%2C periplasmic phosphate-binding protein~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: phosphate ABC transporter%2C phosphate-binding protein gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1904 Trad_1905 Trad_1905 Trad_1905 2047405 2047899 - hypothetical protein KEGG: pla:Plav_1058 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~SPTR: C1N6Q3 Predicted protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1905 Trad_1906 Trad_1906 Trad_1906 2048460 2049284 - phosphonate ABC transporter%2C inner membrane subunit COGs: COG3639 ABC-type phosphate/phosphonate transport system permease component~InterPro IPR005769:IPR000515~KEGG: dsh:Dshi_2012 putative ABC transporter inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: D0CWJ3 Phosphonate ABC transporter%2C permease protein PhnE~TIGRFAM: phosphonate ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphonate ABC transporter%2C permease protein PhnE gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1906 Trad_1907 Trad_1907 Trad_1907 2049284 2050084 - phosphonate ABC transporter%2C inner membrane subunit COGs: COG3639 ABC-type phosphate/phosphonate transport system permease component~InterPro IPR005769:IPR000515~KEGG: xau:Xaut_3964 phosphonate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A7IME5 Phosphonate ABC transporter%2C inner membrane subunit~TIGRFAM: phosphonate ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphonate ABC transporter%2C permease protein PhnE gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1907 Trad_1908 Trad_1908 Trad_1908 2050081 2050920 - phosphonate ABC transporter%2C ATPase subunit COGs: COG3638 ABC-type phosphate/phosphonate transport system ATPase component~InterPro IPR003593:IPR012693:IPR003439:IPR017871~KEGG: cyb:CYB_1467 phosphonate ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: D0CWJ1 Phosphonate ABC transporter%2C ATP-binding protein~TIGRFAM: phosphonate ABC transporter%2C ATPase subunit~PFAM: ABC transporter~TIGRFAM: phosphonate ABC transporter%2C ATP-binding protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1908 Trad_1909 Trad_1909 Trad_1909 2050993 2051961 - phosphonate ABC transporter%2C periplasmic phosphonate-binding protein COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component~InterPro IPR005770~KEGG: cyb:CYB_0011 putative phosphonate ABC transporter%2C phosphonate-binding protein~SPTR: Q2JQA0 Putative phosphonate ABC transporter%2C phosphonate-binding protein~TIGRFAM: phosphonate ABC transporter%2C periplasmic phosphonate-binding protein~TIGRFAM: phosphate/phosphite/phosphonate ABC transporters%2C periplasmic binding protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1909 Trad_1910 Trad_1910 Trad_1910 2052170 2053021 + phosphonate ABC transporter%2C periplasmic phosphonate-binding protein COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component~InterPro IPR005770~KEGG: amt:Amet_0515 phosphonate ABC transporter%2C periplasmic phosphonate-binding protein~SPTR: A6TKM4 Phosphonate ABC transporter%2C periplasmic phosphonate-binding protein~TIGRFAM: phosphonate ABC transporter%2C periplasmic phosphonate-binding protein~PFAM: NMT1/THI5 like~TIGRFAM: phosphate/phosphite/phosphonate ABC transporters%2C periplasmic binding protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1910 Trad_1911 Trad_1911 Trad_1911 2053130 2053900 + phosphonate ABC transporter%2C ATPase subunit COGs: COG3638 ABC-type phosphate/phosphonate transport system ATPase component~InterPro IPR003593:IPR012693:IPR003439:IPR017871~KEGG: bha:BH2974 alkylphosphonate ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: A6CM35 Alkylphosphonate ABC tranporter ATP-binding protein~TIGRFAM: phosphonate ABC transporter%2C ATPase subunit~PFAM: ABC transporter~TIGRFAM: phosphonate ABC transporter%2C ATP-binding protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1911 Trad_1912 Trad_1912 Trad_1912 2053887 2054696 + phosphonate ABC transporter%2C inner membrane subunit COGs: COG3639 ABC-type phosphate/phosphonate transport system permease component~InterPro IPR005769:IPR000515~KEGG: ssp:SSP1425 ABC-type phosphate phosphonate transport system permease component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q49XC7 ABC-type phosphate phosphonate transport system permease component~TIGRFAM: phosphonate ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphonate ABC transporter%2C permease protein PhnE gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1912 Trad_1913 Trad_1913 Trad_1913 2054696 2055526 + phosphonate ABC transporter%2C inner membrane subunit COGs: COG3639 ABC-type phosphate/phosphonate transport system permease component~InterPro IPR005769:IPR000515~KEGG: oih:OB0599 alkylphosphonate ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q8ESM7 Alkylphosphonate ABC tranporter permease~TIGRFAM: phosphonate ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphonate ABC transporter%2C permease protein PhnE gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1913 Trad_1914 Trad_1914 Trad_1914 2055637 2055861 + histidyl-tRNA synthetase KEGG: sti:Sthe_0476 histidyl-tRNA synthetase~SPTR: D1C7T1 Histidyl-tRNA synthetase gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1914 Trad_1915 Trad_1915 Trad_1915 2055979 2056398 - hypothetical protein KEGG: hypothetical protein~SPTR: A7SYH4 Predicted protein gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1915 Trad_1916 Trad_1916 Trad_1916 2056745 2057122 + transcriptional regulator%2C HxlR family COGs: COG1733 transcriptional regulator protein~InterPro IPR002577~KEGG: rmr:Rmar_2378 transcriptional regulator%2C HxlR family~PFAM: helix-turn-helix HxlR type~SPTR: C1XM35 Predicted transcriptional regulator~PFAM: HxlR-like helix-turn-helix gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1916 Trad_1917 Trad_1917 Trad_1917 2057197 2059371 - phosphate acetyltransferase COGs: COG0280 Phosphotransacetylase~InterPro IPR004614:IPR016475:IPR010766:IPR002505~KEGG: pmy:Pmen_3645 phosphate acetyltransferase~PFAM: phosphate acetyl/butaryl transferase%3B DRTGG domain protein~SPTR: A4XYH7 Phosphotransacetylase~TIGRFAM: phosphate acetyltransferase~PFAM: DRTGG domain%3B Phosphate acetyl/butaryl transferase%3B CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: phosphate acetyltransferase gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1917 Trad_1918 Trad_1918 Trad_1918 2059558 2059773 + hypothetical protein KEGG: apt:APA01_26330 mechanosensitive ion channel small-conductance MscS~SPTR: C7L6V9 Mechanosensitive ion channel Small-conductance MscS gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1918 Trad_1919 Trad_1919 Trad_1919 2060006 2060260 - hypothetical protein KEGG: maq:Maqu_3962 hypothetical protein~SPTR: Q6VSU5 Tegument protein (Fragment) gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1919 Trad_1920 Trad_1920 Trad_1920 2060373 2061860 - MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: sru:SRU_2717 putative multidrug resistance protein NorM~PFAM: multi antimicrobial extrusion protein MatE~SPTR: Q2RZ22 Putative multidrug resistance protein NorM~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1920 Trad_1921 Trad_1921 Trad_1921 2061973 2062935 + F420-dependent oxidoreductase%2C G6PDH family COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase~InterPro IPR019945:IPR011251~KEGG: ddr:Deide_3p02310 putative 5%2C10-methylenetetrahydromethanopterin reductase~SPTR: C1D3W1 Putative 5%2C10-methylenetetrahydromethanopterin reductase~TIGRFAM: F420-dependent oxidoreductase%2C G6PDH family~PFAM: Luciferase-like monooxygenase~TIGRFAM: F420-dependent oxidoreductase%2C G6PDH family gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1921 Trad_1922 Trad_1922 Trad_1922 2063007 2065760 + alanyl-tRNA synthetase COGs: COG0013 Alanyl-tRNA synthetase~InterProIPR002318:IPR018162:IPR018163:IPR018165:IPR 018164:IPR012947:IPR003156~KEGG: ttj:TTHA1831 alanyl-tRNA synthetase~PFAM: Alanyl-tRNA synthetase%2C class IIc-like%3B Threonyl/alanyl tRNA synthetase SAD%3B phosphoesterase DHHA1~SPTR: B7A622 Alanyl-tRNA synthetase~TIGRFAM: alanyl-tRNA synthetase~PFAM: DHHA1 domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetases class II (A)~TIGRFAM: alanyl-tRNA synthetase gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1922 Trad_1923 Trad_1923 Trad_1923 2065774 2066559 + pseudogene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1923 Trad_1924 Trad_1924 Trad_1924 2066570 2067034 + Holliday junction resolvase YqgF COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)~InterPro IPR006641:IPR005227:IPR012337~KEGG: ttj:TTHA1829 hypothetical protein~PFAM: Holliday junction resolvase YqgF~SMART: Resolvase RNase H domain protein fold~SPTR: C1XRJ3 Putative uncharacterized protein~PFAM: Uncharacterised protein family (UPF0081)~TIGRFAM: conserved hypothetical protein TIGR00250 gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1924 Trad_1925 Trad_1925 Trad_1925 2067056 2068123 + aminodeoxychorismate lyase COGs: COG1559 periplasmic solute-binding protein~InterPro IPR003770~KEGG: tth:TTC1477 4-amino-4-deoxychorismate lyase~PFAM: aminodeoxychorismate lyase~SPTR: C1XG68 Putative uncharacterized protein~PFAM: YceG-like family~TIGRFAM: conserved hypothetical protein TIGR00247 gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1925 Trad_1926 Trad_1926 Trad_1926 2068151 2069332 + protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: dra:DR_0487 hypothetical protein~PFAM: protein of unknown function DUF214~SPTR: Q9RX28 Putative uncharacterized protein~PFAM: Predicted permease~TIGRFAM: lipoprotein releasing system%2C transmembrane protein%2C LolC/E family gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1926 Trad_1927 Trad_1927 Trad_1927 2069394 2070617 + TraB family protein COGs: COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein)~InterPro IPR005230:IPR002816~KEGG: csa:Csal_2875 TraB family protein~PFAM: TraB determinant protein~SPTR: Q1QTI7 TraB family protein~TIGRFAM: TraB family protein~PFAM: TraB family~TIGRFAM: pheromone shutdown-related protein TraB gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1927 Trad_1928 Trad_1928 Trad_1928 2070722 2071204 + regulatory protein RecX COGs: COG2137 conserved hypothetical protein~InterPro IPR003783~KEGG: gym:GYMC10_4107 regulatory protein RecX~PFAM: regulatory protein RecX~SPTR: C6D2C3 Regulatory protein RecX~PFAM: RecX family gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1928 Trad_1929 Trad_1929 Trad_1929 2071271 2071627 + putative Flp pilus assembly protein KEGG: bpt:Bpet3376 putative Flp pilus assembly protein~SPTR: D0DNH9 PTS system%2C sucrose-specific IIBC component gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1929 Trad_1930 Trad_1930 Trad_1930 2071959 2072354 - thioesterase superfamily protein COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism~InterPro IPR003736:IPR006683~KEGG: ddr:Deide_3p01440 putative PaaI thioesterase~PFAM: thioesterase superfamily protein~SPTR: C1XUE8 Uncharacterized conserved protein~PFAM: Thioesterase superfamily~TIGRFAM: uncharacterized domain 1 gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1930 Trad_1931 Trad_1931 Trad_1931 2072543 2075026 + DNA gyrase%2C A subunit COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit~InterProIPR002205:IPR005743:IPR013760:IPR013758:IPR 013757:IPR006691~KEGG: dge:Dgeo_1016 DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA gyrase/topoisomerase IV subunit A~SPTR: Q1IZL8 DNA gyrase%2C A subunit~TIGRFAM: DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV%2C subunit A%3B DNA gyrase C-terminal domain%2C beta-propeller~TIGRFAM: DNA gyrase%2C A subunit gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1931 Trad_1932 Trad_1932 Trad_1932 2075436 2075801 + conserved hypothetical protein KEGG: hbu:Hbut_1519 hypothetical protein~SPTR: C7HYE5 Three-deoxy-D-manno-octulosonic-acid transferase domain protein gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1932 Trad_1933 Trad_1933 Trad_1933 2076032 2076667 + Tripartite ATP-independent periplasmic transporter DctQ component COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component~InterPro IPR007387~KEGG: hoh:Hoch_4834 tripartite ATP-independent periplasmic transporter DctQ component~PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~SPTR: D0LSV1 Tripartite ATP-independent periplasmic transporter DctQ component~PFAM: Tripartite ATP-independent periplasmic transporters%2C DctQ component gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1933 Trad_1934 Trad_1934 Trad_1934 2076667 2078043 + TRAP dicarboxylate transporter%2C DctM subunit COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component~InterPro IPR004681:IPR010656~KEGG: ava:Ava_0884 TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit~SPTR: B4WMM3 TRAP transporter%2C DctM subunit subfamily~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: DctM-like transporters~TIGRFAM: TRAP transporter%2C DctM subunit gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1934 Trad_1935 Trad_1935 Trad_1935 2078121 2079224 - Extracellular solute-binding protein%2C family 7 COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component~InterPro IPR006311:IPR017909:IPR018389~KEGG: cyt:cce_2141 TRAP dicarboxylate transporter%2C DctP subunit~PFAM: Extracellular solute-binding protein%2C family 7~SPTR: A0YXL7 Extracellular solute-binding protein~PFAM: Bacterial extracellular solute-binding protein%2C family 7~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1935 Trad_1936 Trad_1936 Trad_1936 2079554 2079919 + twin-arginine translocation protein%2C TatA/E family subunit COGs: COG1826 Sec-independent protein secretion pathway components~InterPro IPR006312:IPR003998:IPR003369~KEGG: tth:TTC0018 sec-independent protein translocase protein TatA~PFAM: sec-independent translocation protein mttA/Hcf106~SPTR: C1XXT2 Sec-independent protein translocase TatA~TIGRFAM: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: mttA/Hcf106 family~TIGRFAM: twin arginine-targeting protein translocase%2C TatA/E family gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1936 Trad_1937 Trad_1937 Trad_1937 2079997 2080731 + Sec-independent protein translocase%2C TatC subunit COGs: COG0805 Sec-independent protein secretion pathway component TatC~InterPro IPR019822:IPR002033~KEGG: ttj:TTHA0387 sec-independent protein translocase protein TatC~PFAM: Sec-independent periplasmic protein translocase~SPTR: Q5SLA6 Sec-independent protein translocase protein TatC~TIGRFAM: Sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent protein translocase protein (TatC)~TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1937 Trad_1938 Trad_1938 Trad_1938 2080694 2081794 + phospho-2-dehydro-3-deoxyheptonate aldolase COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase~InterProIPR010954:IPR006268:IPR020822:IPR013785:IPR 002701:IPR006218~KEGG: ttj:TTHA0388 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase~PFAM: DAHP synthetase I/KDSA%3B Chorismate mutase%2C type II~SPTR: Q5SLA5 Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase%3B chorismate mutase~PFAM: Chorismate mutase type II%3B DAHP synthetase I family~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase%3B chorismate mutase domain of gram positive AroA protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1938 Trad_1939 Trad_1939 Trad_1939 2081985 2082983 + 4Fe-4S ferredoxin iron-sulfur binding domain protein InterPro IPR017896:IPR001450:IPR017900~KEGG: ttj:TTHA0389 polyferredoxin~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: Q5SLA4 Polyferredoxin~PFAM: 4Fe-4S binding domain gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1939 Trad_1940 Trad_1940 Trad_1940 2083102 2083341 + conserved hypothetical protein KEGG: ttj:TTHA0433 hypothetical protein~SPTR: Q72LJ4 Putative uncharacterized protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1940 Trad_1941 Trad_1941 Trad_1941 2083338 2084468 - major facilitator superfamily MFS_1 InterPro IPR016196:IPR011701~KEGG: tth:TTC1441 transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Q72HP5 Transporter~PFAM: Major Facilitator Superfamily gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1941 Trad_1942 Trad_1942 Trad_1942 2084485 2084823 - hypothetical protein KEGG: kpu:KP1_3220 putative ABC transport system permease component~SPTR: C0XI63 Putative uncharacterized protein gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1942 Trad_1943 Trad_1943 Trad_1943 2084827 2085711 - conserved hypothetical protein KEGG: ttj:TTHA1350 hypothetical protein~SPTR: C1XPD6 Putative uncharacterized protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1943 Trad_1944 Trad_1944 Trad_1944 2085776 2086777 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683:IPR004104~KEGG: cmi:CMM_2663 putative oxidoreductase~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: A5CUF9 Putative oxidoreductase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1944 Trad_1945 Trad_1945 Trad_1945 2086848 2089157 - Protein of unknown function DUF1998 COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster~InterProIPR014001:IPR001650:IPR014021:IPR011545:IPR 018973~KEGG: ttj:TTHA1257 putative helicase~PFAM: Protein of unknown function DUF1998%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: Q72J86 Probable ATP-dependent helicase lhr~PFAM: Helicase conserved C-terminal domain%3B Domain of unknown function (DUF1998)%3B DEAD/DEAH box helicase~TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1945 Trad_1946 Trad_1946 Trad_1946 2089739 2090956 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: fsu:Fisuc_1521 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: C9RRD2 Glycosyl transferase family 2~PFAM: Glycosyl transferase family 2 gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1946 Trad_1947 Trad_1947 Trad_1947 2091071 2092282 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR016040:IPR001509~KEGG: syp:SYNPCC7002_A0847 NAD dependent epimerase/dehydratase family protein~PFAM: NAD-dependent epimerase/dehydratase~SPTR: C0XQ24 UDP-sulfoquinovose synthase~PFAM: NAD dependent epimerase/dehydratase family gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1947 Trad_1948 Trad_1948 Trad_1948 2092354 2092440 + pseudogene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1948 Trad_1949 Trad_1949 Trad_1949 2093017 2093163 + hypothetical protein gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1949 Trad_1950 Trad_1950 Trad_1950 2093262 2094407 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: car:cauri_0861 glycogen synthase~PFAM: glycosyl transferase group 1~SPTR: C8NVY4 Group 1 glycosyl transferase~PFAM: Glycosyl transferases group 1 gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1950 Trad_1951 Trad_1951 Trad_1951 2094542 2095441 + GCN5-related N-acetyltransferase InterPro IPR016181:IPR000182~KEGG: tth:TTC1955 acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: C1XUY9 Acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1951 Trad_1952 Trad_1952 Trad_1952 2095920 2096345 + beta-Ig-H3/fasciclin COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats~InterPro IPR000782~KEGG: rsq:Rsph17025_2816 beta-Ig-H3/fasciclin~PFAM: beta-Ig-H3/fasciclin~SMART: beta-Ig-H3/fasciclin~SPTR: C1E1L0 Fasciclin family protein~manually curated~PFAM: Fasciclin domain gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1952 Trad_1953 Trad_1953 Trad_1953 2096567 2097688 - protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: mes:Meso_2554 hypothetical protein~PFAM: protein of unknown function UPF0118~SPTR: Q11F87 Putative uncharacterized protein~PFAM: Domain of unknown function DUF20 gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1953 Trad_1954 Trad_1954 Trad_1954 2097970 2099655 + CTP synthase COGs: COG0504 CTP synthase (UTP-ammonia lyase)~InterPro IPR004468:IPR017926:IPR017456:IPR000991~KEGG: tth:TTC1102 CTP synthetase~PFAM: CTP synthase-like%3B glutamine amidotransferase class-I~PRIAM: CTP synthase~SPTR: B7A5I9 CTP synthase~TIGRFAM: CTP synthase~PFAM: Glutamine amidotransferase class-I%3B CTP synthase N-terminus~TIGRFAM: CTP synthase gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1954 Trad_1955 Trad_1955 Trad_1955 2099671 2100363 + uridine kinase COGs: COG0572 Uridine kinase~InterPro IPR000764:IPR006083:IPR017975~KEGG: dge:Dgeo_0202 uridine kinase~PFAM: phosphoribulokinase/uridine kinase~PRIAM: Uridine kinase~SPTR: C1PB13 Uridine kinase~TIGRFAM: uridine kinase~PFAM: Phosphoribulokinase / Uridine kinase family~TIGRFAM: uridine kinase gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1955 Trad_1956 Trad_1956 Trad_1956 2100360 2102261 + conserved hypothetical protein%2C precursor%3B putative membrane protein KEGG: ddr:Deide_00400 conserved hypothetical protein%2C precursor%3B putative membrane protein~SPTR: C1CXN2 Putative uncharacterized protein gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1956 Trad_1957 Trad_1957 Trad_1957 2102272 2103255 + polysaccharide pyruvyl transferase CsaB COGs: COG2327 conserved hypothetical protein~InterPro IPR019896:IPR007345~KEGG: ttj:TTHA0576 putative pyruvyl-transferase~PFAM: polysaccharide pyruvyl transferase~SPTR: Q5SKR7 Putative pyruvyl-transferase~TIGRFAM: polysaccharide pyruvyl transferase CsaB~manually curated~PFAM: Polysaccharide pyruvyl transferase~TIGRFAM: polysaccharide pyruvyl transferase CsaB gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1957 Trad_1958 Trad_1958 Trad_1958 2103312 2104082 + TPR repeat-containing protein InterProIPR019734:IPR011990:IPR013026:IPR011717:IPR 001440~KEGG: pmt:PMT1811 TPR repeat-containing protein~PFAM: TPR repeat-containing protein%3B Tetratricopeptide TPR_4~SPTR: Q7V4X4 TPR repeat:HAT (Half-A-TPR) repeat~PFAM: Tetratricopeptide repeat gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1958 Trad_1959 Trad_1959 Trad_1959 2104225 2104902 + transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterProIPR000595:IPR001808:IPR018490:IPR014710:IPR 012318~KEGG: hor:Hore_18160 putative transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: regulatory protein Crp%3B cyclic nucleotide-binding~SPTR: D1CAF8 Transcriptional regulator%2C Crp/Fnr family~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1959 Trad_1960 Trad_1960 Trad_1960 2104985 2106292 - aminotransferase class-III COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase~InterPro IPR015424:IPR015421:IPR005814~KEGG: sus:Acid_7662 aminotransferase~PFAM: aminotransferase class-III~SPTR: Q01P59 Aminotransferase~PFAM: Aminotransferase class-III gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1960 Trad_1961 Trad_1961 Trad_1961 2106762 2109542 - ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC COGs: COG0474 Cation transport ATPase~InterProIPR001757:IPR000695:IPR004014:IPR008250:IPR 005834:IPR006068:IPR018303~KEGG: rrs:RoseRS_3064 ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: A5UXS5 ATPase%2C P-type (Transporting)%2C HAD superfamily%2C subfamily IC~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B Cation transporting ATPase%2C C-terminus%3B Cation transporter/ATPase%2C N-terminus%3B haloacid dehalogenase-like hydrolase~TIGRFAM: plasma-membrane calcium-translocating P-type ATPase%3B sodium or proton efflux -- potassium uptake antiporter%2C P-type ATPase%2C alpha subunit%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1961 Trad_1962 Trad_1962 Trad_1962 2110769 2111743 - aldo/keto reductase COGs: COG4989 oxidoreductase~InterPro IPR001395~KEGG: rmr:Rmar_0199 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: D0MCZ5 Aldo/keto reductase~PFAM: Aldo/keto reductase family gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1962 Trad_1963 Trad_1963 Trad_1963 2111869 2112837 + 6-phosphofructokinase COGs: COG0205 6-phosphofructokinase~InterPro IPR012828:IPR000023:IPR012003:IPR015912~KEGG: dge:Dgeo_1637 6-phosphofructokinase~PFAM: phosphofructokinase~SPTR: Q1IXV2 6-phosphofructokinase~TIGRFAM: 6-phosphofructokinase~manually curated~PFAM: Phosphofructokinase~TIGRFAM: 6-phosphofructokinase gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1963 Trad_1964 Trad_1964 Trad_1964 2113019 2113276 - hypothetical protein KEGG: aha:AHA_3878 M23/M37 peptidase domain-containing protein~SPTR: A0KPW6 M23/M37 peptidase domain protein gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1964 Trad_1965 Trad_1965 Trad_1965 2113409 2113852 + UspA domain protein InterPro IPR014729:IPR006016~KEGG: sfu:Sfum_0737 UspA domain-containing protein~PFAM: UspA domain protein~SPTR: A0LG83 UspA domain protein~PFAM: Universal stress protein family gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1965 Trad_1966 Trad_1966 Trad_1966 2114090 2114836 + protein of unknown function DUF125 transmembrane COGs: COG1814 Uncharacterized membrane protein~InterPro IPR008217~KEGG: maq:Maqu_3212 hypothetical protein~PFAM: protein of unknown function DUF125 transmembrane~SPTR: A4BVA1 Integral membrane protein~PFAM: VIT family gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1966 Trad_1967 Trad_1967 Trad_1967 2115112 2116854 - peptidase S15 InterPro IPR000383~KEGG: nph:NP4164A hypothetical protein~PFAM: peptidase S15~SPTR: B4X1B7 X-Pro dipeptidyl-peptidase (S15 family)~PFAM: X-Pro dipeptidyl-peptidase (S15 family) gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1967 Trad_1968 Trad_1968 Trad_1968 2117027 2118211 - tyrosyl-tRNA synthetase COGs: COG0162 Tyrosyl-tRNA synthetase~InterProIPR002307:IPR014729:IPR002942:IPR002305:IPR 001412~KEGG: ttj:TTHA1399 tyrosyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib~SPTR: B7A5L6 Tyrosyl-tRNA synthetase~TIGRFAM: tyrosyl-tRNA synthetase~PFAM: tRNA synthetases class I (W and Y)~TIGRFAM: tyrosyl-tRNA synthetase gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1968 Trad_1969 Trad_1969 Trad_1969 2118948 2119871 + 6-phosphogluconate dehydrogenase%2C decarboxylating COGs: COG1023 6-phosphogluconate dehydrogenase~InterProIPR004849:IPR016040:IPR008927:IPR013328:IPR 006183:IPR006115:IPR006114:IPR002204~KEGG: dde:Dde_3470 6-phosphogluconate dehydrogenase-like protein~PFAM: 6-phosphogluconate dehydrogenase NAD-binding%3B 6-phosphogluconate dehydrogenase domain protein~SPTR: Q30VN3 6-phosphogluconate dehydrogenase (Decarboxylating)~TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: 6-phosphogluconate dehydrogenase%2C C-terminal domain%3B NAD binding domain of 6-phosphogluconate dehydrogenase~TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating) gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1969 Trad_1970 Trad_1970 Trad_1970 2119868 2121325 + glucose-6-phosphate 1-dehydrogenase COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase~InterPro IPR001282:IPR016040~KEGG: rxy:Rxyl_0051 glucose-6-phosphate 1-dehydrogenase~PFAM: glucose-6-phosphate dehydrogenase~PRIAM: Glucose-6-phosphate dehydrogenase~SPTR: Q1AZZ6 Glucose-6-phosphate 1-dehydrogenase~TIGRFAM: glucose-6-phosphate 1-dehydrogenase~PFAM: Glucose-6-phosphate dehydrogenase%2C C-terminal domain%3B Glucose-6-phosphate dehydrogenase%2C NAD binding domain~TIGRFAM: glucose-6-phosphate 1-dehydrogenase gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1970 Trad_1971 Trad_1971 Trad_1971 2121440 2121628 + sensory transduction histidine kinase KEGG: cac:CAC0525 sensory transduction histidine kinase~SPTR: Q97LN2 Sensor protein gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1971 Trad_1972 Trad_1972 Trad_1972 2121694 2122296 + SNARE associated Golgi protein-like protein COGs: COG0586 membrane-associated protein~InterPro IPR015414~KEGG: hha:Hhal_0736 alkaline phosphatase~PFAM: SNARE associated Golgi protein~SPTR: A1WV05 Alkaline phosphatase~PFAM: SNARE associated Golgi protein gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1972 Trad_1973 Trad_1973 Trad_1973 2122455 2123078 + SNARE associated Golgi protein-like protein COGs: COG0586 membrane-associated protein~InterPro IPR015414~KEGG: hha:Hhal_0736 alkaline phosphatase~PFAM: SNARE associated Golgi protein~SPTR: A1WV05 Alkaline phosphatase~PFAM: SNARE associated Golgi protein gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1973 Trad_1974 Trad_1974 Trad_1974 2123075 2124931 - excinuclease ABC%2C C subunit COGs: COG0322 Nuclease subunit of the excinuclease complex~InterProIPR000305:IPR003583:IPR004791:IPR010994:IPR 009055:IPR001943:IPR001162:IPR000445~KEGG: dge:Dgeo_1124 excinuclease ABC%2C C subunit~PFAM: excinuclease ABC C subunit domain protein%3B Excinuclease ABC C subunit domain protein%3B UvrB/UvrC protein%3B helix-hairpin-helix motif~SMART: Excinuclease ABC C subunit domain protein%3B Helix-hairpin-helix DNA-binding class 1~SPTR: Q1IZB2 UvrABC system protein C~TIGRFAM: excinuclease ABC%2C C subunit~PFAM: UvrB/uvrC motif%3B UvrC Helix-hairpin-helix N-terminal%3B GIY-YIG catalytic domain~TIGRFAM: excinuclease ABC%2C C subunit gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1974 Trad_1975 Trad_1975 Trad_1975 2124977 2126245 - amino acid permease-associated region COGs: COG0531 Amino acid transporter~InterPro IPR002293:IPR004841~KEGG: rba:RB950 amino acid transporter~PFAM: amino acid permease-associated region~SPTR: B4VJ35 Amino acid permease superfamily~PFAM: Amino acid permease gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1975 Trad_1976 Trad_1976 Trad_1976 2126457 2127383 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: lch:Lcho_3242 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B1Y1N8 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1976 Trad_1977 Trad_1977 Trad_1977 2127393 2128310 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: lch:Lcho_3241 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B1Y1N7 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1977 Trad_1978 Trad_1978 Trad_1978 2128432 2129745 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: lch:Lcho_3240 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: A4BGH7 Putative substrate binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1978 Trad_1979 Trad_1979 Trad_1979 2129840 2131255 + glycoside hydrolase family 4 COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase~InterPro IPR015955:IPR016040:IPR001088~KEGG: rca:Rcas_1884 glycoside hydrolase family protein~PFAM: glycoside hydrolase family 4~SPTR: A7NKF4 Glycoside hydrolase family 4~PFAM: Family 4 glycosyl hydrolase%3B Family 4 glycosyl hydrolase C-terminal domain gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1979 Trad_1980 Trad_1980 Trad_1980 2131296 2132363 + transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR010982:IPR001761~KEGG: bpm:BURPS1710b_A1187 LacI family regulatory protein~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: C1XVC9 Transcriptional regulator%2C LacI family~manually curated~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1980 Trad_1981 Trad_1981 Trad_1981 2132360 2134417 - Oligopeptidase A COGs: COG0339 Zn-dependent oligopeptidase~InterPro IPR001567:IPR001412~KEGG: sus:Acid_5816 oligopeptidase A~PFAM: peptidase M3A and M3B thimet/oligopeptidase F~PRIAM: Oligopeptidase A~SPTR: Q01UA7 Oligopeptidase A~PFAM: Peptidase family M3 gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1981 Trad_1982 Trad_1982 Trad_1982 2134642 2136657 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000160:IPR003018:IPR003607:IPR006674~KEGG: ddr:Deide_03700 putative diguanylate cyclase(GGDEF)/metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain%3B GGDEF domain containing protein%3B GAF domain protein~SMART: GGDEF domain containing protein%3B GAF domain protein%3B metal-dependent phosphohydrolase HD region~SPTR: C1XZI9 Uncharacterized domain HDIG-containing protein~TIGRFAM: diguanylate cyclase~PFAM: HD domain%3B GAF domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1982 Trad_1983 Trad_1983 Trad_1983 2136628 2137518 - hypothetical protein KEGG: sti:Sthe_0192 hypothetical protein~SPTR: D1C693 Putative uncharacterized protein gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1983 Trad_1984 Trad_1984 Trad_1984 2137627 2138802 - acetyl-CoA acetyltransferase COGs: COG0183 Acetyl-CoA acetyltransferase~InterPro IPR002155:IPR016039:IPR016038~KEGG: scl:sce7105 putative beta-ketoadipyl CoA thiolase~SPTR: B9Z576 Acetyl-CoA acetyltransferase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase%2C C-terminal domain%3B Thiolase%2C N-terminal domain~TIGRFAM: acetyl-CoA acetyltransferases gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1984 Trad_1985 Trad_1985 Trad_1985 2138927 2140501 - nicotinate phosphoribosyltransferase COGs: COG1488 Nicotinic acid phosphoribosyltransferase~InterPro IPR006405:IPR007229:IPR015977:IPR002328~KEGG: chl:Chy400_0205 nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase-like~PRIAM: Nicotinate phosphoribosyltransferase~SPTR: B9LHD5 Nicotinate phosphoribosyltransferase~TIGRFAM: nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family~TIGRFAM: putative nicotinate phosphoribosyltransferase gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1985 Trad_1986 Trad_1986 Trad_1986 2140894 2142600 + GTP-binding proten HflX COGs: COG2262 GTPase~InterPro IPR016496:IPR006073:IPR002917~KEGG: tth:TTC0198 GTP-binding protein HflX~PFAM: GTP-binding protein HSR1-related~SPTR: B7A7N7 GTP-binding proten HflX~TIGRFAM: GTP-binding proten HflX~manually curated~PFAM: GTPase of unknown function~TIGRFAM: GTP-binding protein HflX gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1986 Trad_1987 Trad_1987 Trad_1987 2142782 2143675 + Indigoidine synthase A family protein COGs: COG2313 Uncharacterized protein involved in pigment biosynthesis~InterPro IPR007342~KEGG: ttj:TTHA1177 indigoidine synthase A like protein~PFAM: Indigoidine synthase A family protein~SPTR: C1XM62 Uncharacterized enzyme involved in pigment biosynthesis~PFAM: Indigoidine synthase A like protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1987 Trad_1988 Trad_1988 Trad_1988 2143690 2144889 + conserved hypothetical protein COGs: COG1426 conserved hypothetical protein~KEGG: rce:RC1_2642 hypothetical protein~SPTR: B6IUT5 Putative uncharacterized protein gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1988 Trad_1989 Trad_1989 Trad_1989 2144986 2146140 + protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: ddr:Deide_13280 putative ABC transporter%2C permease component%3B putative membrane protein~PFAM: protein of unknown function DUF214~SPTR: C1CVP9 Putative ABC transporter%2C permease component%3B putative membrane protein~PFAM: Predicted permease gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1989 Trad_1990 Trad_1990 Trad_1990 2146214 2148277 + Protein of unknown function DUF2207%2C membrane COGs: COG4907 membrane protein~InterPro IPR018702~KEGG: mma:MM_2614 hypothetical protein~PFAM: Protein of unknown function DUF2207%2C membrane~SPTR: C1XI68 Predicted membrane protein%2C COG4907~PFAM: Predicted membrane protein (DUF2207) gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1990 Trad_1991 Trad_1991 Trad_1991 2148325 2149065 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: dra:DR_0473 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XRJ9 ABC-type antimicrobial peptide transport system%2C ATPase component~PFAM: ABC transporter gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1991 Trad_1992 Trad_1992 Trad_1992 2149136 2149567 + protein of unknown function DUF423 COGs: COG2363 Uncharacterized small membrane protein~InterPro IPR006696~KEGG: dra:DR_1864 hypothetical protein~PFAM: protein of unknown function DUF423~SPTR: Q092R1 YwdK~PFAM: Protein of unknown function (DUF423) gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1992 Trad_1993 Trad_1993 Trad_1993 2149810 2150451 + protein of unknown function DUF892 COGs: COG3685 conserved hypothetical protein~InterPro IPR009078:IPR012347:IPR010287~KEGG: xac:XAC2155 hypothetical protein~PFAM: protein of unknown function DUF892~SPTR: C1YR23 Uncharacterized conserved protein~PFAM: Domain of unknown function (DUF892) gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1993 Trad_1994 Trad_1994 Trad_1994 2150531 2150722 + hypothetical protein KEGG: GA17430 gene product from transcript GA17430-RA~SPTR: B2W4Q8 Cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6 gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1994 Trad_1995 Trad_1995 Trad_1995 2150974 2151894 - transglutaminase domain protein COGs: COG1305 Transglutaminase-like protein~InterPro IPR002931:IPR013589~KEGG: fal:FRAAL5825 hypothetical protein~PFAM: transglutaminase domain protein%3B transglutaminase domain protein~SMART: transglutaminase domain protein~SPTR: Q0RDL1 Putative uncharacterized protein~PFAM: Transglutaminase-like superfamily%3B Bacterial transglutaminase-like N-terminal region gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1995 Trad_1996 Trad_1996 Trad_1996 2151905 2152756 - transglutaminase domain protein COGs: COG1305 Transglutaminase-like protein~InterPro IPR002931~KEGG: dra:DR_0843 hypothetical protein~PFAM: transglutaminase domain protein~SMART: transglutaminase domain protein~SPTR: Q9RW26 Putative uncharacterized protein~PFAM: Transglutaminase-like superfamily gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1996 Trad_1997 Trad_1997 Trad_1997 2152791 2153888 - protein of unknown function DUF403 COGs: COG2307 conserved hypothetical protein~InterPro IPR007296~KEGG: dra:DR_2041 hypothetical protein~PFAM: protein of unknown function DUF403~SPTR: Q9RST2 Putative uncharacterized protein~PFAM: Bacterial domain of unknown function (DUF403) gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1997 Trad_1998 Trad_1998 Trad_1998 2153888 2155354 - protein of unknown function DUF404 COGs: COG2308 conserved hypothetical protein~InterPro IPR016450:IPR007297:IPR007302~KEGG: ddr:Deide_1p01830 hypothetical protein~PFAM: protein of unknown function DUF404%3B protein of unknown function DUF407~SPTR: C1D2K4 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF404)%3B Domain of unknown function (DUF407) gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1998 Trad_1999 Trad_1999 Trad_1999 2155907 2156917 + Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain protein COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase~InterPro IPR014729:IPR020060:IPR020058:IPR001412~KEGG: sth:STH2668 glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain~SPTR: Q67KZ3 Glutamyl-Q tRNA(Asp) synthetase~PFAM: tRNA synthetases class I (E and Q)%2C catalytic domain gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_1999 Trad_2000 Trad_2000 Trad_2000 2157017 2157775 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR016040:IPR002347:IPR002198~KEGG: cyc:PCC7424_0442 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B4B477 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase~TIGRFAM: 3-hydroxybutyrate dehydrogenase gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2000 Trad_2001 Trad_2001 Trad_2001 2157876 2158961 + Agmatine deiminase COGs: COG2957 Peptidylarginine deiminase~InterPro IPR007466~KEGG: ddr:Deide_22800 putative agmatine deiminase~PFAM: Porphyromonas-type peptidyl-arginine deiminase~PRIAM: Agmatine deiminase~SPTR: C1XPI8 Peptidylarginine deiminase-like enzyme~PFAM: Porphyromonas-type peptidyl-arginine deiminase gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2001 Trad_2002 Trad_2002 Trad_2002 2158948 2159856 + N-carbamoylputrescine amidase COGs: COG0388 amidohydrolase~InterPro IPR017755:IPR003010~KEGG: ddr:Deide_22900 putative hydrolase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~SPTR: C1XPI7 N-carbamoylputrescine amidase~TIGRFAM: N-carbamoylputrescine amidase~PFAM: Carbon-nitrogen hydrolase~TIGRFAM: N-carbamoylputrescine amidase gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2002 Trad_2003 Trad_2003 Trad_2003 2160171 2161295 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR002482:IPR011055:IPR018392:IPR016047~KEGG: sti:Sthe_0204 peptidase M23~PFAM: Peptidase M23%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM~SPTR: C1XFB0 Metalloendopeptidase-like membrane protein~PFAM: Peptidase family M23%3B LysM domain gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2003 Trad_2004 Trad_2004 Trad_2004 2161557 2163260 + ATP-dependent DNA helicase%2C RecQ family COGs: COG0514 Superfamily II DNA helicase~InterProIPR014001:IPR001650:IPR018329:IPR014021:IPR 011545:IPR002464~KEGG: hoh:Hoch_6833 ATP-dependent DNA helicase%2C RecQ family~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: D0LUH4 ATP-dependent DNA helicase%2C RecQ family~TIGRFAM: ATP-dependent DNA helicase%2C RecQ family~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase~TIGRFAM: ATP-dependent DNA helicase%2C RecQ family gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2004 Trad_2005 Trad_2005 Trad_2005 2163257 2164054 + metallophosphoesterase InterPro IPR004843~KEGG: ttj:TTHA0082 phosphoesterase~PFAM: metallophosphoesterase~SPTR: B7A857 Metallophosphoesterase~PFAM: Calcineurin-like phosphoesterase gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2005 Trad_2006 Trad_2006 Trad_2006 2164103 2164903 + conserved hypothetical protein KEGG: dra:DR_2136 hypothetical protein~SPTR: Q9RSI8 Putative uncharacterized protein gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2006 Trad_2007 Trad_2007 Trad_2007 2165076 2165708 - hypothetical protein KEGG: cbi:CLJ_B3157 sodium:alanine symporter family protein~SPTR: A4BB43 Putative uncharacterized protein gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2007 Trad_2008 Trad_2008 Trad_2008 2165821 2167059 + FolC bifunctional protein COGs: COG0285 Folylpolyglutamate synthase~InterPro IPR001645:IPR013221:IPR004101~KEGG: dra:DR_0340 folyl-polyglutamate synthetase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~SPTR: C1XH42 Folylpolyglutamate synthase/dihydrofolate synthase~TIGRFAM: FolC bifunctional protein~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2008 Trad_2009 Trad_2009 Trad_2009 2167056 2167715 + protein of unknown function DUF480 COGs: COG3132 conserved hypothetical protein~InterPro IPR007432~KEGG: azo:azo0627 hypothetical protein~PFAM: protein of unknown function DUF480~SPTR: A1K339 UPF0502 protein azo0627~PFAM: Protein of unknown function%2C DUF480 gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2009 Trad_2010 Trad_2010 Trad_2010 2168563 2169915 + MiaB-like tRNA modifying enzyme YliG COGs: COG0621 2-methylthioadenine synthetase~InterProIPR006638:IPR005839:IPR005840:IPR002792:IPR 013848:IPR007197~KEGG: dge:Dgeo_0375 hypothetical protein~PFAM: Protein of unknown function UPF0004 %3B Radical SAM domain protein%3B deoxyribonuclease/rho motif-related TRAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: C1XSR8 SSU ribosomal protein S12P methylthiotransferase~TIGRFAM: MiaB-like tRNA modifying enzyme YliG%3B RNA modification enzyme%2C MiaB family~PFAM: TRAM domain%3B Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: MiaB-like tRNA modifying enzyme YliG%2C TIGR01125%3B RNA modification enzyme%2C MiaB family gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2010 Trad_2011 Trad_2011 Trad_2011 2170217 2170462 + N-acetylmuramic acid-6-phosphate etherase KEGG: mlo:mlr4770 N-acetylmuramic acid-6-phosphate etherase~SPTR: Q98DB9 Mlr4770 protein gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2011 Trad_2012 Trad_2012 Trad_2012 2170410 2171204 - ABC transporter related protein COGs: COG1126 ABC-type polar amino acid transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: mes:Meso_1116 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: B6QXD7 GeneraL l-amino acid transport atp-binding protein aapp~PFAM: ABC transporter gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2012 Trad_2013 Trad_2013 Trad_2013 2171213 2172439 - polar amino acid ABC transporter%2C inner membrane subunit COGs: COG0765 ABC-type amino acid transport system permease component~InterPro IPR010065:IPR000515~KEGG: rrs:RoseRS_4003 polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A5V0E5 Polar amino acid ABC transporter%2C inner membrane subunit~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2013 Trad_2014 Trad_2014 Trad_2014 2172441 2174282 - polar amino acid ABC transporter%2C inner membrane subunit COGs: COG4597 ABC-type amino acid transport system permease component~InterPro IPR010065:IPR000515~KEGG: chl:Chy400_3495 polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B9LCK2 Polar amino acid ABC transporter%2C inner membrane subunit~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2014 Trad_2015 Trad_2015 Trad_2015 2174545 2175564 - extracellular solute-binding protein family 3 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain~InterPro IPR001638:IPR018313~KEGG: chl:Chy400_3494 extracellular solute-binding protein family 3~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3~SPTR: B9LCK1 Extracellular solute-binding protein family 3~PFAM: Bacterial extracellular solute-binding proteins%2C family 3~TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2015 Trad_2016 Trad_2016 Trad_2016 2175874 2176578 - V-type ATPase%2C D subunit COGs: COG1394 H+-ATPase subunit D~InterPro IPR002699~KEGG: dge:Dgeo_2045 V-type ATPase%2C D subunit~PFAM: H+transporting two-sector ATPase D subunit~SPTR: C1XVU6 H(+)-transporting ATP synthase%2C vacuolar type%2C subunit D~TIGRFAM: V-type ATPase%2C D subunit~PFAM: ATP synthase subunit D~TIGRFAM: H(+)-transporting ATP synthase%2C vacuolar type%2C subunit D gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2016 Trad_2017 Trad_2017 Trad_2017 2176648 2178066 - H+transporting two-sector ATPase alpha/beta subunit central region COGs: COG1156 H+-ATPase subunit B~InterPro IPR000793:IPR004100:IPR000194:IPR020003~KEGG: ttj:TTHA1272 V-type ATP synthase subunit B~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SPTR: C1XVU7 Archaeal/vacuolar-type H+-ATPase subunit B~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2017 Trad_2018 Trad_2018 Trad_2018 2178079 2179818 - H+transporting two-sector ATPase alpha/beta subunit central region COGs: COG1155 H+-ATPase subunit A~InterPro IPR000793:IPR018118:IPR004100:IPR000194~KEGG: tth:TTC0907 V-type ATP synthase subunit A~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SPTR: C1XVU8 Archaeal/vacuolar-type H+-ATPase subunit A~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain%3B ATP synthase alpha/beta chain%2C C terminal domain gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2018 Trad_2019 Trad_2019 Trad_2019 2179951 2180277 - Vacuolar H+transporting two-sector ATPase F subunit InterPro IPR008218~KEGG: dge:Dgeo_2048 vacuolar H+-transporting two-sector ATPase%2C F subunit~PFAM: Vacuolar H+transporting two-sector ATPase F subunit~SPTR: C1XVU9 Archaeal/vacuolar-type H+-ATPase subunit F~PFAM: ATP synthase (F/14-kDa) subunit gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2019 Trad_2020 Trad_2020 Trad_2020 2180270 2181280 - H+transporting two-sector ATPase C (AC39) subunit COGs: COG1527 H+-ATPase subunit C~InterPro IPR002843~KEGG: ddr:Deide_00970 putative V-type ATP synthase subunit C~PFAM: H+transporting two-sector ATPase C (AC39) subunit~SPTR: C1CXU1 Putative V-type ATP synthase subunit C~PFAM: ATP synthase (C/AC39) subunit~TIGRFAM: ATP synthase A1%2C C subunit gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2020 Trad_2021 Trad_2021 Trad_2021 2181282 2181905 - H+transporting two-sector ATPase E subunit COGs: COG1390 H+-ATPase subunit E~InterPro IPR002842~KEGG: dge:Dgeo_2050 H+-transporting two-sector ATPase%2C E subunit~PFAM: H+transporting two-sector ATPase E subunit~SPTR: Q1IWP0 V-type ATP synthase subunit E~PFAM: ATP synthase (E/31 kDa) subunit gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2021 Trad_2022 Trad_2022 Trad_2022 2181908 2182219 - H+transporting two-sector ATPase C subunit InterPro IPR002379~KEGG: ttj:TTHA1277 V-type ATP synthase%2C subunit K~PFAM: H+transporting two-sector ATPase C subunit~SPTR: Q72J68 V-type sodium ATP synthase subunit K Homolog~PFAM: ATP synthase subunit C gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2022 Trad_2023 Trad_2023 Trad_2023 2182216 2184198 - V-type ATPase 116 kDa subunit COGs: COG1269 H+-ATPase subunit I~InterPro IPR002490~KEGG: ttj:TTHA1278 V-type ATP synthase subunit I~PFAM: V-type ATPase 116 kDa subunit~SPTR: Q72J67 V-type sodium ATP synthase subunit I~PFAM: V-type ATPase 116kDa subunit family gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2023 Trad_2024 Trad_2024 Trad_2024 2184207 2184548 - V-type ATP synthase%2C subunit (VapC-therm) KEGG: ttj:TTHA1279 V-type ATP synthase%2C subunit (VapC-therm)~SPTR: B7A885 V-type ATP synthase%2C subunit (VapC-therm) gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2024 Trad_2025 Trad_2025 Trad_2025 2184810 2186846 - serine/threonine protein kinase COGs: COG0515 Serine/threonine protein kinase~InterProIPR020635:IPR002290:IPR011009:IPR011042:IPR 000719:IPR013017:IPR017442:IPR001258:IPR017441:IPR008271~KEGG: ttj:TTHA1594 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain%3B NHL repeat containing protein~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C subgroup%2C catalytic domain~SPTR: Q5SHY6 Serine/threonine protein kinase~PFAM: Protein kinase domain%3B NHL repeat gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2025 Trad_2026 Trad_2026 Trad_2026 2187059 2187748 - DSBA oxidoreductase COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis~InterPro IPR012336:IPR001853~KEGG: ddr:Deide_22890 hypothetical protein~PFAM: DSBA oxidoreductase~SPTR: C1XG75 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis~PFAM: DSBA-like thioredoxin domain gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2026 Trad_2027 Trad_2027 Trad_2027 2187903 2188175 - conserved hypothetical protein KEGG: ttj:TTHA1604 hypothetical protein~SPTR: Q72I92 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3467) gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2027 Trad_2028 Trad_2028 Trad_2028 2188250 2189710 - 2-phosphoglycerate kinase COGs: COG2074 2-phosphoglycerate kinase~InterPro IPR005144~KEGG: dra:DR_1514 2-phosphoglycerate kinase~SPTR: C1XL78 2-phosphoglycerate kinase~PFAM: Zeta toxin gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2028 Trad_2029 Trad_2029 Trad_2029 2189783 2190424 - NUDIX hydrolase InterPro IPR015797:IPR000086:IPR020476:IPR020084~KEGG: acp:A2cp1_4264 NUDIX hydrolase~PFAM: NUDIX hydrolase~SPTR: B8JAT2 NUDIX hydrolase~PFAM: NUDIX domain gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2029 Trad_2030 Trad_2030 Trad_2030 2190414 2191040 - MazG family protein COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain~InterPro IPR011551:IPR004518~KEGG: dge:Dgeo_0816 nucleoside triphosphate pyrophosphohydrolase~PFAM: MazG nucleotide pyrophosphohydrolase~SPTR: Q1J066 MazG family protein~TIGRFAM: MazG family protein~PFAM: MazG nucleotide pyrophosphohydrolase domain~TIGRFAM: MazG family protein gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2030 Trad_2031 Trad_2031 Trad_2031 2191111 2191860 - protein of unknown function DUF152 COGs: COG1496 conserved hypothetical protein~InterPro IPR003730:IPR011324~KEGG: dra:DR_1966 hypothetical protein~PFAM: protein of unknown function DUF152~SPTR: C1XWL2 Putative uncharacterized protein~PFAM: Multi-copper polyphenol oxidoreductase laccase~TIGRFAM: conserved hypothetical protein TIGR00726 gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2031 Trad_2032 Trad_2032 Trad_2032 2191853 2192239 - DoxX family protein COGs: COG4270 membrane protein~InterPro IPR011637~KEGG: npu:Npun_R3477 hypothetical protein~PFAM: DoxX family protein~SPTR: B2J134 Putative uncharacterized protein~PFAM: DoxX gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2032 Trad_2033 Trad_2033 Trad_2033 2192226 2192504 - Excinuclease ABC C subunit domain protein COGs: COG2827 endonuclease containing a URI domain~InterPro IPR000305~KEGG: mxa:MXAN_0472 GIY-YIG catalytic domain-containing protein~PFAM: Excinuclease ABC C subunit domain protein~SPTR: Q1DF31 GIY-YIG catalytic domain protein~PFAM: GIY-YIG catalytic domain gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2033 Trad_2034 Trad_2034 Trad_2034 2192506 2193048 - protein of unknown function DUF1684 COGs: COG3358 conserved hypothetical protein~InterPro IPR012467~KEGG: dge:Dgeo_1648 hypothetical protein~PFAM: protein of unknown function DUF1684~SPTR: Q1IXU1 Putative uncharacterized protein~manually curated~PFAM: Protein of unknown function (DUF1684) gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2034 Trad_2035 Trad_2035 Trad_2035 2193048 2194079 - putative methyltransferase COGs: COG0220 S-adenosylmethionine-dependent methyltransferase~InterPro IPR003358~KEGG: ttj:TTHA1619 methyltransferase~PFAM: putative methyltransferase~SPTR: C1XL96 tRNA (Guanine-N(7)-)-methyltransferase~PFAM: Putative methyltransferase~TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2035 Trad_2036 Trad_2036 Trad_2036 2194388 2195371 + transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR010982:IPR001761~KEGG: mta:Moth_2024 LacI family transcription regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~SPTR: Q2RGW9 Transcriptional regulator%2C LacI family~manually curated~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2036 Trad_2037 Trad_2037 Trad_2037 2195468 2197477 + Beta-galactosidase COGs: COG1874 Beta-galactosidase~InterProIPR017853:IPR003476:IPR013781:IPR013529:IPR 013738:IPR013739:IPR018247~KEGG: aac:Aaci_2891 beta-galactosidase~PFAM: Glycoside hydrolase family 42 domain protein%3B Beta-galactosidase trimerisation domain protein%3B Beta-galactosidase domain protein~PRIAM: Beta-galactosidase~SPTR: B7DQ50 Beta-galactosidase~PFAM: Beta-galactosidase trimerisation domain%3B Beta-galactosidase C-terminal domain%3B Beta-galactosidase gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2037 Trad_2038 Trad_2038 Trad_2038 2197714 2198838 + Arabinogalactan endo-1%2C4-beta-galactosidase COGs: COG3867 Arabinogalactan endo-1 4-beta-galactosidase~InterPro IPR017853:IPR013781:IPR011683~KEGG: trq:TRQ2_1617 arabinogalactan endo-1%2C4-beta-galactosidase~PFAM: glycosyl hydrolase 53 domain protein~PRIAM: Arabinogalactan endo-1%2C4-beta-galactosidase~SPTR: B1LCP4 Arabinogalactan endo-1%2C4-beta-galactosidase~PFAM: Glycosyl hydrolase family 53 gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2038 Trad_2039 Trad_2039 Trad_2039 2198858 2200051 + extracellular solute-binding protein family 1 COGs: COG2182 Maltose-binding periplasmic protein/domains~InterPro IPR006060:IPR006059~KEGG: ttj:TTHA1652 maltose ABC transporter%2C periplasmic maltose-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: B7A9F5 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2039 Trad_2040 Trad_2040 Trad_2040 2200293 2201762 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: ttj:TTHA1651 maltose ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q5SHS9 Maltose ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2040 Trad_2041 Trad_2041 Trad_2041 2201759 2203051 + binding-protein-dependent transport systems inner membrane component COGs: COG3833 ABC-type maltose transport systems permease component~InterPro IPR000515~KEGG: ttj:TTHA1650 maltose ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q5SHT0 Maltose ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2041 Trad_2042 Trad_2042 Trad_2042 2203079 2204095 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase InterPro IPR003010~KEGG: tth:TTC0234 hypothetical protein~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~SPTR: C1XNW1 Putative uncharacterized protein~PFAM: Carbon-nitrogen hydrolase gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2042 Trad_2043 Trad_2043 Trad_2043 2204177 2204362 + hypothetical protein KEGG: rrs:RoseRS_2240 hypothetical protein~SPTR: A5UVG6 Putative uncharacterized protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2043 Trad_2044 Trad_2044 Trad_2044 2204610 2205005 + hypothetical protein KEGG: vei:Veis_2562 hypothetical protein~SPTR: A0YCM1 Putative uncharacterized protein gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2044 Trad_2045 Trad_2045 Trad_2045 2205002 2205346 + transcriptional regulator%2C MarR/EmrR family protein InterPro IPR011991~KEGG: tcu:Tcur_0081 transcriptional regulator%2C MarR/EmrR family protein~SPTR: A3TQL9 Putative uncharacterized protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2045 Trad_2046 Trad_2046 Trad_2046 2205460 2205717 + conserved hypothetical protein KEGG: hypothetical protein~SPTR: Q7SG21 Putative uncharacterized protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2046 Trad_2047 Trad_2047 Trad_2047 2206015 2207076 + permease YjgP/YjgQ family protein COGs: COG0795 permease~InterPro IPR005495~KEGG: dge:Dgeo_0048 permease YjgP/YjgQ~PFAM: permease YjgP/YjgQ family protein~SPTR: Q1J2D3 Permease YjgP/YjgQ~PFAM: Predicted permease YjgP/YjgQ family gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2047 Trad_2048 Trad_2048 Trad_2048 2207231 2208310 + permease YjgP/YjgQ family protein COGs: COG0795 permease~InterPro IPR005495~KEGG: ddr:Deide_23260 putative membrane protein%3B putative permease~PFAM: permease YjgP/YjgQ family protein~SPTR: C1D091 Putative membrane protein%3B putative permease~PFAM: Predicted permease YjgP/YjgQ family gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2048 Trad_2049 Trad_2049 Trad_2049 2208388 2211468 + hypothetical protein KEGG: ttj:TTHA0396 hypothetical protein~SPTR: Q5SL97 Putative uncharacterized protein TTHA0396 gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2049 Trad_2050 Trad_2050 Trad_2050 2211624 2212976 + hypothetical protein KEGG: GK18624 gene product from transcript GK18624-RA~SPTR: C9ZC72 Putative bifunctional sensor kinase/response regulator gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2050 Trad_2051 Trad_2051 Trad_2051 2212973 2214358 - MscS Mechanosensitive ion channel COGs: COG0668 Small-conductance mechanosensitive channel~InterPro IPR011066:IPR010920:IPR011014:IPR006685~KEGG: ttj:TTHA1715 hypothetical protein~PFAM: MscS Mechanosensitive ion channel~SPTR: B7A925 MscS Mechanosensitive ion channel~PFAM: Mechanosensitive ion channel gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2051 Trad_2052 Trad_2052 Trad_2052 2214707 2215669 - fatty acid/phospholipid synthesis protein PlsX COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme~InterPro IPR012281:IPR003664~KEGG: ttj:TTHA1746 putative glycerol-3-phosphate acyltransferase PlsX~PFAM: fatty acid synthesis plsX protein~SPTR: Q5SHI4 Fatty acid/phospholipid synthesis protein plsX~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX~PFAM: Fatty acid synthesis protein~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2052 Trad_2053 Trad_2053 Trad_2053 2215868 2216806 + pseudouridine synthase%2C RluA family COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterProIPR002942:IPR006225:IPR020103:IPR006145:IPR 006224~KEGG: ddr:Deide_16790 putative ribosomal large subunit pseudouridine synthase D~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: C1CWT3 Pseudouridine synthase~TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase%2C RluA family gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2053 Trad_2054 Trad_2054 Trad_2054 2217033 2219633 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296:IPR018114~KEGG: rmr:Rmar_1363 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: D0MIE4 Glycosyl transferase group 1~PFAM: Glycosyl transferases group 1 gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2054 Trad_2055 Trad_2055 Trad_2055 2219633 2220670 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: rmr:Rmar_2613 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: D0MFZ7 Glycosyl transferase group 1~PFAM: Glycosyl transferases group 1 gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2055 Trad_2056 Trad_2056 Trad_2056 2220710 2222356 + sodium/hydrogen exchanger COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component~InterPro IPR016040:IPR003148:IPR006153~KEGG: cyt:cce_3637 Na+/H+ antiporter~PFAM: sodium/hydrogen exchanger%3B TrkA-N domain protein~SPTR: B1X0U6 Probable Na+/H+ antiporter~PFAM: TrkA-N domain%3B Sodium/hydrogen exchanger family gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2056 Trad_2057 Trad_2057 Trad_2057 2222418 2224247 + oligoendopeptidase%2C pepF/M3 family COGs: COG1164 Oligoendopeptidase F~InterPro IPR011977:IPR001567~KEGG: rca:Rcas_3273 PepF/M3 family oligoendopeptidase~PFAM: peptidase M3A and M3B thimet/oligopeptidase F~SPTR: A7NP28 Oligoendopeptidase%2C pepF/M3 family~TIGRFAM: oligoendopeptidase%2C pepF/M3 family~PFAM: Oligopeptidase F%3B Peptidase family M3~TIGRFAM: oligoendopeptidase%2C pepF/M3 family gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2057 Trad_2058 Trad_2058 Trad_2058 2224265 2224876 - hypothetical protein KEGG: bxe:Bxe_A3425 septum formation inhibitor~SPTR: A3TUW8 Putative uncharacterized protein gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2058 Trad_2059 Trad_2059 Trad_2059 2224932 2226806 - TAP domain protein InterPro IPR000073:IPR013595~KEGG: ddr:Deide_12130 putative alpha/beta hydrolase fold family protein with TAP domain%2C precursor~PFAM: TAP domain protein%3B alpha/beta hydrolase fold~SPTR: C1CVA9 Putative Alpha/beta hydrolase fold family protein with TAP domain%2C~PFAM: TAP-like protein%3B alpha/beta hydrolase fold gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2059 Trad_2060 Trad_2060 Trad_2060 2226916 2229036 - glycogen debranching enzyme GlgX COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase~InterProIPR006589:IPR011837:IPR017853:IPR014756:IPR 013783:IPR013781:IPR004193:IPR006047~KEGG: hoh:Hoch_6129 glycogen debranching enzyme GlgX~PFAM: glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: D0LLA8 Glycogen debranching enzyme GlgX~TIGRFAM: glycogen debranching enzyme GlgX~PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)%3B Alpha amylase%2C catalytic domain~TIGRFAM: glycogen debranching enzyme GlgX gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2060 Trad_2061 Trad_2061 Trad_2061 2229201 2229689 + transcriptional regulator%2C MarR family InterPro IPR000835:IPR011991~KEGG: ttj:TTHA0733 MarR family transcriptional regulator~PFAM: regulatory protein MarR~SMART: regulatory protein MarR~SPTR: B7AA78 Transcriptional regulator%2C MarR family~PFAM: MarR family gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2061 Trad_2062 Trad_2062 Trad_2062 2229893 2230752 + Transposase-like protein COGs: COG3293 Transposase and inactivated derivatives~KEGG: dge:Dgeo_2686 putative IS1648 transposase~SPTR: Q1J315 Putative IS1648 transposase~manually curated~PFAM: Transposase DDE domain gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2062 Trad_2063 Trad_2063 Trad_2063 2231215 2231748 - hypothetical protein KEGG: sal:Sala_0951 tetratricopeptide TPR_2~SPTR: C1XVZ9 Putative uncharacterized protein gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2063 Trad_2064 Trad_2064 Trad_2064 2231796 2232611 - conserved hypothetical protein KEGG: cyb:CYB_2721 hypothetical protein~SPTR: Q2JIB6 Putative uncharacterized protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2064 Trad_2065 Trad_2065 Trad_2065 2232641 2234044 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR003661:IPR003594:IPR009082:IPR005467:IPR 003660:IPR004358~KEGG: tth:TTC1228 two-component system histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SPTR: C1XLR1 Sensor protein~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2065 Trad_2066 Trad_2066 Trad_2066 2234159 2234869 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR011006:IPR011991:IPR001867~KEGG: ttj:TTHA1593 hypothetical protein~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: C1XLR2 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2066 Trad_2067 Trad_2067 Trad_2067 2234983 2235687 + 2-phosphosulfolactate phosphatase COGs: COG2045 Phosphosulfolactate phosphohydrolase~InterPro IPR005238~KEGG: dra:DR_1400 hypothetical protein~PFAM: 2-phosphosulfolactate phosphatase~SPTR: Q9RUI6 Probable 2-phosphosulfolactate phosphatase~PFAM: 2-phosphosulpholactate phosphatase~TIGRFAM: 2-phosphosulfolactate phosphatase gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2067 Trad_2068 Trad_2068 Trad_2068 2235689 2236099 + NUDIX hydrolase InterPro IPR015797:IPR000086:IPR020084~KEGG: noc:Noc_0193 NUDIX hydrolase~PFAM: NUDIX hydrolase~SPTR: Q3JEM0 NUDIX hydrolase~PFAM: NUDIX domain gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2068 Trad_2069 Trad_2069 Trad_2069 2236147 2236509 + protein of unknown function DUF74 COGs: COG0393 conserved hypothetical protein~InterPro IPR002765~KEGG: rmr:Rmar_1926 protein of unknown function DUF74~PFAM: protein of unknown function DUF74~SPTR: D0MK97 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF74) gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2069 Trad_2070 Trad_2070 Trad_2070 2236745 2238052 + aspartyl-tRNA synthetase COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase~InterProIPR004523:IPR016027:IPR012340:IPR006195:IPR 002312:IPR004365:IPR004364~KEGG: ddr:Deide_10020 putative aspartate--tRNA ligase (aspartic acid translase)~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~SPTR: C1CUL6 Putative Aspartate--tRNA ligase (Aspartic acid translase)~TIGRFAM: aspartyl-tRNA synthetase~PFAM: tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: aspartyl-tRNA synthetase%2C archaeal type gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2070 Trad_2071 Trad_2071 Trad_2071 2238059 2238673 - Thymidine kinase COGs: COG1435 Thymidine kinase~InterPro IPR001267:IPR020633~KEGG: ddr:Deide_06660 putative thymidine kinase~PFAM: thymidine kinase~PRIAM: Thymidine kinase~SPTR: C1D0Z6 Thymidine kinase~PFAM: Thymidine kinase gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2071 Trad_2072 Trad_2072 Trad_2072 2238771 2239961 - hypothetical protein KEGG: esi:Exig_0252 cell wall anchor domain-containing protein~SPTR: Q1K437 TPR repeat gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2072 Trad_2073 Trad_2073 Trad_2073 2240377 2240985 + 20S proteasome A and B subunits COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit~InterPro IPR001353~KEGG: ttj:TTHA0631 ATP-dependent protease peptidase subunit~PFAM: 20S proteasome A and B subunits~SPTR: C1XJR9 ATP-dependent protease HslVU (ClpYQ)%2C peptidase subunit~PFAM: Proteasome subunit gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2073 Trad_2074 Trad_2074 Trad_2074 2240985 2242265 + heat shock protein HslVU%2C ATPase subunit HslU COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit~InterPro IPR003593:IPR004491:IPR013093~KEGG: sus:Acid_7339 ATP-dependent protease ATP-binding subunit HslU~PFAM: ATPase AAA-2 domain protein~SMART: AAA ATPase~SPTR: C6NUR0 ATP-dependent hsl protease ATP-binding subunit HslU~TIGRFAM: heat shock protein HslVU%2C ATPase subunit HslU~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: heat shock protein HslVU%2C ATPase subunit HslU gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2074 Trad_2075 Trad_2075 Trad_2075 2242405 2244213 + GTP-binding protein TypA COGs: COG1217 membrane GTPase involved in stress response~InterProIPR005225:IPR006298:IPR009000:IPR009022:IPR 000640:IPR000795:IPR004161~KEGG: dge:Dgeo_0864 GTP-binding protein TypA~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain protein~SPTR: Q1J018 GTP-binding protein TypA~TIGRFAM: GTP-binding protein TypA%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain~TIGRFAM: GTP-binding protein TypA/BipA%3B small GTP-binding protein domain gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2075 Trad_2076 Trad_2076 Trad_2076 2244361 2245122 - chromosome segregation and condensation protein ScpA COGs: COG1354 conserved hypothetical protein~InterPro IPR003768~KEGG: dge:Dgeo_1603 hypothetical protein~PFAM: chromosome segregation and condensation protein ScpA~SPTR: Q1IXY6 Putative uncharacterized protein gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2076 Trad_2077 Trad_2077 Trad_2077 2245112 2245783 - Phosphoglycerate mutase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR013078~KEGG: ddr:Deide_20400 putative phosphoglycerate mutase GpmB~PFAM: Phosphoglycerate mutase~SPTR: C1CYM6 Putative phosphoglycerate mutase gpmB~PFAM: Phosphoglycerate mutase family gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2077 Trad_2078 Trad_2078 Trad_2078 2246019 2247800 + malto-oligosyltrehalose trehalohydrolase COGs: COG0296 1 4-alpha-glucan branching enzyme~InterProIPR006589:IPR012768:IPR017853:IPR013783:IPR 013781:IPR004193:IPR006047~KEGG: hoh:Hoch_4560 malto-oligosyltrehalose trehalohydrolase~PFAM: glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: D0LQ14 Malto-oligosyltrehalose trehalohydrolase~TIGRFAM: malto-oligosyltrehalose trehalohydrolase~PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)%3B Alpha amylase%2C catalytic domain~TIGRFAM: malto-oligosyltrehalose trehalohydrolase gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2078 Trad_2079 Trad_2079 Trad_2079 2247797 2250457 + malto-oligosyltrehalose synthase COGs: COG3280 Maltooligosyl trehalose synthase~InterProIPR006589:IPR012767:IPR017853:IPR013781:IPR 006047~KEGG: hoh:Hoch_4561 malto-oligosyltrehalose synthase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: D0LQ15 Malto-oligosyltrehalose synthase~TIGRFAM: malto-oligosyltrehalose synthase~PFAM: Alpha amylase%2C catalytic domain~TIGRFAM: malto-oligosyltrehalose synthase gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2079 Trad_2080 Trad_2080 Trad_2080 2250677 2251819 + hypothetical protein KEGG: gur:Gura_0307 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin~SPTR: A5GD30 Peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2080 Trad_2081 Trad_2081 Trad_2081 2251942 2252259 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: ttj:TTHA1719 copper homeostasis operon regulatory protein~PFAM: protein of unknown function DUF156~SPTR: B7A606 Putative uncharacterized protein~PFAM: Uncharacterised BCR%2C COG1937 gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2081 Trad_2082 Trad_2082 Trad_2082 2252519 2254678 + copper-translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterProIPR006403:IPR006416:IPR001757:IPR000695:IPR 008250:IPR005834:IPR018303~KEGG: tth:TTC1371 copper-exporting ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: Q72HW1 Copper-exporting ATPase~TIGRFAM: copper-translocating P-type ATPase%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: copper-(or silver)-translocating P-type ATPase%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2082 Trad_2083 Trad_2083 Trad_2083 2254862 2257390 + heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterProIPR006122:IPR006403:IPR006416:IPR001757:IPR 006121:IPR001877:IPR008250:IPR005834:IPR018303:IPR017969~KEGG: dge:Dgeo_2553 heavy metal translocating P-type ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: Q1J3E7 Heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B copper-translocating P-type ATPase%3B copper ion binding protein%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B Heavy-metal-associated domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: copper-(or silver)-translocating P-type ATPase%3B copper ion binding protein%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2083 Trad_2084 Trad_2084 Trad_2084 2257447 2258022 + protein of unknown function DUF305 COGs: COG3544 conserved hypothetical protein~InterPro IPR005183~KEGG: cyn:Cyan7425_1047 protein of unknown function DUF305~PFAM: protein of unknown function DUF305~SPTR: B8HXZ4 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF305) gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2084 Trad_2085 Trad_2085 Trad_2085 2258196 2259206 - lipoic acid synthetase COGs: COG0320 Lipoate synthase~InterPro IPR006638:IPR003698:IPR013785:IPR007197~KEGG: aeh:Mlg_1586 lipoyl synthase~PFAM: Radical SAM domain protein~PRIAM: Lipoyl synthase~SMART: Elongator protein 3/MiaB/NifB~SPTR: Q0A8A4 Lipoyl synthase~TIGRFAM: lipoic acid synthetase~PFAM: Radical SAM superfamily~TIGRFAM: lipoate synthase gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2085 Trad_2086 Trad_2086 Trad_2086 2259203 2259868 - lipoate-protein ligase B COGs: COG0321 Lipoate-protein ligase B~InterPro IPR000544:IPR004143~KEGG: ttj:TTHA0240 lipoate-protein ligase B~PFAM: biotin/lipoate A/B protein ligase~PRIAM: Lipoyl(octanoyl) transferase~SPTR: B7A907 Lipoate-protein ligase B~TIGRFAM: lipoate-protein ligase B~PFAM: Biotin/lipoate A/B protein ligase family~TIGRFAM: lipoate-protein ligase B gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2086 Trad_2087 Trad_2087 Trad_2087 2259942 2260520 - hypothetical protein KEGG: mxa:MXAN_4434 putative serine/threonine protein kinase~SPTR: Q1D418 Putative serine/threonine protein kinase gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2087 Trad_2088 Trad_2088 Trad_2088 2260709 2260948 + cold-shock DNA-binding domain protein COGs: COG1278 Cold shock protein~InterProIPR011129:IPR016027:IPR012156:IPR012340:IPR 002059:IPR019844~KEGG: dra:DR_0907 CSD family cold shock protein~PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~SPTR: Q9RVW4 Cold shock protein%2C CSD family~PFAM: 'Cold-shock' DNA-binding domain gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2088 Trad_2089 Trad_2089 Trad_2089 2261316 2261741 - Activator of Hsp90 ATPase 1 family protein InterPro IPR013538~KEGG: sme:SM_b20607 hypothetical protein~PFAM: Activator of Hsp90 ATPase 1 family protein~SPTR: Q92TJ4 Putative uncharacterized protein~PFAM: Activator of Hsp90 ATPase homolog 1-like protein gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2089 Trad_2090 Trad_2090 Trad_2090 2261741 2262976 - conserved hypothetical protein COGs: COG2133 Glucose/sorbosone dehydrogenase~InterPro IPR011041:IPR011042~KEGG: sth:STH2009 hypothetical protein~SPTR: C1XPF4 Glucose/sorbosone dehydrogenase~PFAM: Glucose / Sorbosone dehydrogenase gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2090 Trad_2091 Trad_2091 Trad_2091 2263023 2263688 - tRNA guanosine-2'-O-methyltransferase COGs: COG0566 rRNA methylase~InterPro IPR001537~KEGG: dge:Dgeo_2234 tRNA (guanosine-2'-O-)-methyltransferase~PFAM: tRNA/rRNA methyltransferase (SpoU)~PRIAM: tRNA guanosine-2'-O-methyltransferase~SPTR: Q1IW56 tRNA (Guanosine-2'-O-)-methyltransferase~PFAM: SpoU rRNA Methylase family%3B SpoU%2C rRNA methylase%2C C-terminal gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2091 Trad_2092 Trad_2092 Trad_2092 2264298 2265674 - beta-galactosidase COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase~InterProIPR017736:IPR017853:IPR013781:IPR001360:IPR 018120~KEGG: dge:Dgeo_2862 beta-glucosidase~PFAM: glycoside hydrolase family 1~PRIAM: Beta-glucosidase~SPTR: Q1J2J3 Beta-glucosidase~TIGRFAM: beta-galactosidase~PFAM: Glycosyl hydrolase family 1~TIGRFAM: beta-galactosidase gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2092 Trad_2093 Trad_2093 Trad_2093 2265674 2266834 - xylose isomerase COGs: COG2115 Xylose isomerase~InterPro IPR013453:IPR013022:IPR001998:IPR012307~KEGG: dge:Dgeo_2692 xylose isomerase~PFAM: Xylose isomerase domain protein TIM barrel~SPTR: Q1J309 Xylose isomerase~TIGRFAM: xylose isomerase~PFAM: Xylose isomerase-like TIM barrel~TIGRFAM: xylose isomerase%2C Arthrobacter type gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2093 Trad_2094 Trad_2094 Trad_2094 2266922 2267572 - conserved hypothetical protein COGs: COG3828 conserved hypothetical protein~KEGG: rca:Rcas_4406 hypothetical protein~SPTR: A7NS76 Putative uncharacterized protein~PFAM: Trehalose utilisation gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2094 Trad_2095 Trad_2095 Trad_2095 2267569 2268705 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR016040:IPR000683~KEGG: bja:blr3392 dehydrogenase~PFAM: oxidoreductase domain protein~SPTR: Q89PT8 Dehydrogenase~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2095 Trad_2096 Trad_2096 Trad_2096 2268715 2270352 - glycoside hydrolase family 43 COGs: COG3507 Beta-xylosidase~InterPro IPR013320:IPR006710~KEGG: bha:BH3683 xylan beta-1%2C4-xylosidase~PFAM: glycoside hydrolase family 43~SPTR: C1XN14 Beta-xylosidase~PFAM: Glycosyl hydrolases family 43 gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2096 Trad_2097 Trad_2097 Trad_2097 2270504 2271490 - glycoside hydrolase family 10 COGs: COG3693 Beta-1 4-xylanase~InterPro IPR001000:IPR017853:IPR013781~KEGG: cac:CA_P0116 xylanase~PFAM: glycoside hydrolase family 10~SMART: glycoside hydrolase family 10~SPTR: C7C5G8 Xylanase A~PFAM: Glycosyl hydrolase family 10 gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2097 Trad_2098 Trad_2098 Trad_2098 2271487 2273682 - Endo-1%2C3(4)-beta-glucanase COGs: COG5498 glycosyl hydrolase~InterPro IPR005200~KEGG: tfu:Tfu_2130 hypothetical protein~PFAM: glycoside hydrolase family 81~PRIAM: Endo-1%2C3(4)-beta-glucanase~SPTR: C1YVB0 Predicted glycosyl hydrolase~PFAM: Glycosyl hydrolase family 81 gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2098 Trad_2099 Trad_2099 Trad_2099 2273679 2274998 - hypothetical protein InterPro IPR017853:IPR013781~KEGG: bmn:BMA10247_0632 putative lipoprotein~SPTR: A3MIW3 Putative liporotein gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2099 Trad_2100 Trad_2100 Trad_2100 2275011 2275886 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: ddr:Deide_00560 putative sugar ABC transporter%2C permease component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1CXP7 Putative sugar ABC transporter%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2100 Trad_2101 Trad_2101 Trad_2101 2275886 2276881 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: ddr:Deide_00570 putative sugar ABC transporter%2C permease component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1CXP8 Putative sugar ABC transporter%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2101 Trad_2102 Trad_2102 Trad_2102 2276930 2278162 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059:IPR019775~KEGG: vvy:VVA0125 ABC-type sugar transport system%2C periplasmic component~PFAM: extracellular solute-binding protein family 1~SPTR: D0X5D6 Putative uncharacterized protein~PFAM: Bacterial extracellular solute-binding protein gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2102 Trad_2103 Trad_2103 Trad_2103 2278302 2280425 - glycoside hydrolase family 10 COGs: COG3693 Beta-1 4-xylanase~InterProIPR001000:IPR006584:IPR017853:IPR008979:IPR 013781:IPR005084~KEGG: ttu:TERTU_1599 xylanase~PFAM: glycoside hydrolase family 10%3B Carbohydrate binding family 6~SMART: glycoside hydrolase family 10%3B cellulose binding type IV~SPTR: C5BTG8 Xylanase~PFAM: Glycosyl hydrolase family 10%3B Carbohydrate binding module (family 6) gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2103 Trad_2104 Trad_2104 Trad_2104 2280467 2281474 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR010982:IPR001761~KEGG: saz:Sama_1400 periplasmic binding protein/LacI transcriptional regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: A4BA74 Transcriptional regulator~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2104 Trad_2105 Trad_2105 Trad_2105 2281947 2282477 - Inorganic diphosphatase COGs: COG0221 Inorganic pyrophosphatase~InterPro IPR008162~KEGG: sus:Acid_5542 inorganic diphosphatase~PFAM: Inorganic pyrophosphatase~PRIAM: Inorganic diphosphatase~SPTR: Q01V26 Inorganic diphosphatase~PFAM: Inorganic pyrophosphatase gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2105 Trad_2106 Trad_2106 Trad_2106 2282589 2283170 - SNO glutamine amidotransferase COGs: COG0311 glutamine amidotransferase involved in pyridoxine biosynthesis~InterPro IPR002161~KEGG: ddr:Deide_11600 putative glutamine amidotransferase~PFAM: SNO glutamine amidotransferase~SPTR: C1CV49 Putative glutamine amidotransferase~PFAM: SNO glutamine amidotransferase family gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2106 Trad_2107 Trad_2107 Trad_2107 2283178 2284119 - peptidase S58 DmpA COGs: COG3191 L-aminopeptidase/D-esterase~InterPro IPR016117:IPR005321~KEGG: aav:Aave_1804 peptidase S58%2C DmpA~PFAM: peptidase S58 DmpA~SPTR: A1TN51 Peptidase S58%2C DmpA~PFAM: Peptidase family S58 gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2107 Trad_2108 Trad_2108 Trad_2108 2284198 2286687 - glycosyl transferase family 51 COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein)~InterPro IPR012338:IPR001264:IPR001460~KEGG: tth:TTC0819 putative transpeptidase~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase~SPTR: Q72JF3 Putative transpeptidase~PFAM: Penicillin binding protein transpeptidase domain%3B Transglycosylase gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2108 Trad_2109 Trad_2109 Trad_2109 2287006 2288112 - pseudogene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2109 Trad_2110 Trad_2110 Trad_2110 2288120 2288416 - plasmid stabilization system InterPro IPR007712~KEGG: amr:AM1_2740 hypothetical protein~PFAM: plasmid stabilization system~SPTR: Q4C7V8 Plasmid stabilization system~PFAM: Plasmid stabilisation system protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2110 Trad_2111 Trad_2111 Trad_2111 2288413 2288835 - hypothetical protein KEGG: dge:Dgeo_2718 hypothetical protein~SPTR: B7AAX7 Putative uncharacterized protein gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2111 Trad_2112 Trad_2112 Trad_2112 2289273 2289704 + RbsD or FucU transport COGs: COG4154 Fucose dissimilation pathway protein FucU~InterPro IPR007721~KEGG: apa:APP7_1747 fucose operon FucU protein~PFAM: RbsD or FucU transport~SPTR: C0ABG2 Conserved protein of fucose operon~PFAM: RbsD / FucU transport protein family gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2112 Trad_2113 Trad_2113 Trad_2113 2289924 2291504 + DEAD/DEAH box helicase domain protein COGs: COG0513 Superfamily II DNA and RNA helicase~InterProIPR014001:IPR001650:IPR014021:IPR014014:IPR 011545:IPR012562:IPR000629~KEGG: tth:TTC1895 heat resistant RNA dependent ATPase~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B GUCT~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: C1XGK2 ATP-dependent RNA helicase DbpA~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2113 Trad_2114 Trad_2114 Trad_2114 2291636 2291893 - Transglycosylase-associated protein InterPro IPR007341~KEGG: sti:Sthe_0065 transglycosylase-associated protein~PFAM: Transglycosylase-associated protein~SPTR: D1C5I8 Transglycosylase-associated protein~PFAM: Transglycosylase associated protein gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2114 Trad_2115 Trad_2115 Trad_2115 2291957 2292763 + metallophosphoesterase InterPro IPR004843~KEGG: dra:DR_0935 phosphatase%2C putative~PFAM: metallophosphoesterase~SPTR: C1XFQ6 Calcineurin-like phosphoesterase~PFAM: Calcineurin-like phosphoesterase gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2115 Trad_2116 Trad_2116 Trad_2116 2292751 2293311 - conserved hypothetical protein KEGG: asa:ASA_1504 hypothetical protein~SPTR: A4SL23 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2726) gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2116 Trad_2117 Trad_2117 Trad_2117 2293402 2294361 + NAD(P)H quinone oxidoreductase%2C PIG3 family COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase~InterProIPR014189:IPR011032:IPR016040:IPR013154:IPR 013149~KEGG: tfu:Tfu_0072 putative quinone oxidoreductase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~SPTR: Q47TV4 Putative quinone oxidoreductase~TIGRFAM: NAD(P)H quinone oxidoreductase%2C PIG3 family~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase~TIGRFAM: putative NAD(P)H quinone oxidoreductase%2C PIG3 family gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2117 Trad_2118 Trad_2118 Trad_2118 2294591 2295976 - dihydrolipoamide dehydrogenase COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)~InterProIPR006258:IPR016156:IPR004099:IPR013027:IPR 000815:IPR012999~KEGG: dge:Dgeo_2323 dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~SPTR: C1XI02 Dihydrolipoyl dehydrogenase~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain~TIGRFAM: dihydrolipoamide dehydrogenase gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2118 Trad_2119 Trad_2119 Trad_2119 2296180 2296743 + Domain of unknown function DUF1990 COGs: COG4762 conserved hypothetical protein~InterPro IPR018960~KEGG: scl:sce0916 hypothetical protein~PFAM: Domain of unknown function DUF1990~SPTR: A9EU72 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF1990) gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2119 Trad_2120 Trad_2120 Trad_2120 2296869 2297804 + conserved hypothetical protein COGs: COG3586 conserved hypothetical protein~KEGG: cpb:Cphamn1_1159 hypothetical protein~SPTR: B3EQR4 Putative uncharacterized protein gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2120 Trad_2121 Trad_2121 Trad_2121 2297988 2300495 + leucyl-tRNA synthetase COGs: COG0495 Leucyl-tRNA synthetase~InterProIPR002302:IPR009008:IPR009080:IPR014729:IPR 015413:IPR013155~KEGG: tro:trd_1240 leucyl-tRNA synthetase~PFAM: tRNA synthetase valyl/leucyl anticodon-binding%3B tRNA synthetase class I (M)~SPTR: B9L1I1 Leucyl-tRNA synthetase~TIGRFAM: leucyl-tRNA synthetase~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain~TIGRFAM: leucyl-tRNA synthetase%2C eubacterial and mitochondrial family gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2121 Trad_2122 Trad_2122 Trad_2122 2301166 2301810 + conserved hypothetical protein KEGG: ddr:Deide_14700 hypothetical protein~SPTR: C1XYH2 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2847) gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2122 Trad_2123 Trad_2123 Trad_2123 2302070 2303602 + O-antigen polymerase InterPro IPR007016~KEGG: tth:TTC1837 hypothetical protein~PFAM: O-antigen polymerase~SPTR: Q72GL1 Hypothetical membrane spanning protein~PFAM: O-Antigen ligase gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2123 Trad_2124 Trad_2124 Trad_2124 2303609 2304412 + GCN5-related N-acetyltransferase COGs: COG3375 conserved hypothetical protein~InterPro IPR016181:IPR000182~KEGG: oan:Oant_4362 hypothetical protein~PFAM: GCN5-related N-acetyltransferase~SPTR: A6X758 Putative uncharacterized protein~PFAM: Acetyltransferase (GNAT) family gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2124 Trad_2125 Trad_2125 Trad_2125 2304560 2304814 - cold-shock DNA-binding domain protein COGs: COG1278 Cold shock protein~InterProIPR011129:IPR016027:IPR012156:IPR012340:IPR 002059:IPR019844~KEGG: dra:DR_0907 CSD family cold shock protein~PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~SPTR: Q9RVW4 Cold shock protein%2C CSD family~PFAM: 'Cold-shock' DNA-binding domain gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2125 Trad_2126 Trad_2126 Trad_2126 2305003 2306187 + DegT/DnrJ/EryC1/StrS aminotransferase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR015424:IPR000653:IPR015421:IPR015422~KEGG: cts:Ctha_2154 DegT/DnrJ/EryC1/StrS aminotransferase~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~SPTR: B3QVK5 DegT/DnrJ/EryC1/StrS aminotransferase~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2126 Trad_2127 Trad_2127 Trad_2127 2306184 2307269 - twitching motility protein COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT~InterPro IPR003593:IPR006321:IPR001482~KEGG: ttj:TTHA1774 pili retraction protein PilT~PFAM: type II secretion system protein E~SMART: AAA ATPase~SPTR: C1XRI8 Pilus retraction protein PilT~TIGRFAM: twitching motility protein~PFAM: Type II/IV secretion system protein~TIGRFAM: pilus retraction protein PilT gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2127 Trad_2128 Trad_2128 Trad_2128 2307345 2308499 - Protein of unknown function DUF2006 COGs: COG5621 secreted hydrolase~InterPro IPR018549~KEGG: ttr:Tter_1194 hypothetical protein~PFAM: Protein of unknown function DUF2006~SPTR: D1CBD7 Putative uncharacterized protein~PFAM: Hydroxyneurosporene synthase (CrtC) gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2128 Trad_2129 Trad_2129 Trad_2129 2308749 2309585 + Peptidylprolyl isomerase COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family~InterPro IPR015891:IPR002130~KEGG: dge:Dgeo_0070 peptidylprolyl isomerase~PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~PRIAM: Peptidylprolyl isomerase~SPTR: Q1J2B1 Peptidylprolyl isomerase~PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2129 Trad_2130 Trad_2130 Trad_2130 2309681 2310247 + Peptidylprolyl isomerase COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family~InterPro IPR015891:IPR002130~KEGG: ddr:Deide_02590 putative peptidylprolyl isomerase (peptidyl-prolyl cis-trans isomerase)(PPIase)~PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~PRIAM: Peptidylprolyl isomerase~SPTR: C1CZ30 Putative Peptidylprolyl isomerase (Peptidyl-prolyl cis-trans isomerase)(PPIase)~PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2130 Trad_2131 Trad_2131 Trad_2131 2310263 2310766 + GCN5-related N-acetyltransferase COGs: COG3981 acetyltransferase~InterPro IPR016181:IPR000182~KEGG: sus:Acid_1436 tagatose-bisphosphate aldolase~PFAM: GCN5-related N-acetyltransferase~SPTR: Q028X3 Tagatose-bisphosphate aldolase~PFAM: Acetyltransferase (GNAT) family gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2131 Trad_2132 Trad_2132 Trad_2132 2310814 2311563 + protein of unknown function DUF81 InterPro IPR002781~KEGG: vcj:VCD_001967 hypothetical protein~PFAM: protein of unknown function DUF81~SPTR: C6RGH4 Inner membrane protein YfcA~manually curated~PFAM: Sulfite exporter TauE/SafE gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2132 Trad_2133 Trad_2133 Trad_2133 2311660 2311941 + protein of unknown function DUF497 InterPro IPR007460~KEGG: ttj:TTHB007 hypothetical protein~PFAM: protein of unknown function DUF497~SPTR: Q53WE7 Putative uncharacterized protein TTHB007~PFAM: Protein of unknown function (DUF497) gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2133 Trad_2134 Trad_2134 Trad_2134 2312033 2312353 + conserved hypothetical protein KEGG: ttj:TTHB006 hypothetical protein~SPTR: Q53WE8 Putative uncharacterized protein TTHB006~PFAM: Protein of unknown function (DUF3680) gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2134 Trad_2135 Trad_2135 Trad_2135 2312608 2314182 - carboxyl transferase COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)~InterPro IPR000022:IPR011762:IPR011763~KEGG: dge:Dgeo_0489 carboxyl transferase~PFAM: carboxyl transferase~SPTR: C1XVE3 Acetyl-CoA carboxylase%2C carboxyltransferase component (Subunits alpha and beta)~PFAM: Carboxyl transferase domain gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2135 Trad_2136 Trad_2136 Trad_2136 2314354 2314764 - hypothetical protein KEGG: hypothetical protein LOC100126620~SPTR: C1XSA1 Integrase family protein gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2136 Trad_2137 Trad_2137 Trad_2137 2315013 2316239 + cytochrome P450 COGs: COG2124 Cytochrome P450~InterPro IPR002397:IPR001128:IPR017972~KEGG: swi:Swit_3367 cytochrome P450-like protein~PFAM: cytochrome P450~SPTR: A5VBP7 Cytochrome P450-like protein~PFAM: Cytochrome P450 gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2137 Trad_2138 Trad_2138 Trad_2138 2316276 2317337 + NADH:flavin oxidoreductase/NADH oxidase COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family~InterPro IPR013785:IPR001155~KEGG: psa:PST_2757 FMN oxidoreductase~PFAM: NADH:flavin oxidoreductase/NADH oxidase~SPTR: A4VN56 Probable FMN oxidoreductase~PFAM: NADH:flavin oxidoreductase / NADH oxidase family gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2138 Trad_2139 Trad_2139 Trad_2139 2317381 2318259 + apurinic endonuclease Apn1 COGs: COG0648 Endonuclease IV~InterProIPR013022:IPR001719:IPR012307:IPR001917:IPR 018246~KEGG: rrs:RoseRS_0614 apurinic endonuclease Apn1~PFAM: Xylose isomerase domain protein TIM barrel~PRIAM: Deoxyribonuclease IV (phage-T(4)-induced)~SMART: AP endonuclease family 2~SPTR: Q1NTE1 Deoxyribonuclease IV (Phage T4-induced)~TIGRFAM: apurinic endonuclease Apn1~PFAM: Xylose isomerase-like TIM barrel~TIGRFAM: apurinic endonuclease (APN1) gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2139 Trad_2140 Trad_2140 Trad_2140 2318256 2318690 + hypothetical protein KEGG: hypothetical protein LOC769731~SPTR: B1Z9G0 Putative uncharacterized protein gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2140 Trad_2141 Trad_2141 Trad_2141 2318775 2318885 - hypothetical protein gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2141 Trad_2142 Trad_2142 Trad_2142 2319000 2319329 - protein of unknown function DUF718 COGs: COG3254 conserved hypothetical protein~InterPro IPR008000~KEGG: chl:Chy400_2462 protein of unknown function DUF718~PFAM: protein of unknown function DUF718~SPTR: B9LIR2 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF718) gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2142 Trad_2143 Trad_2143 Trad_2143 2319583 2322132 - hypothetical protein KEGG: pat:Patl_3171 Tfp pilus assembly protein tip-associated adhesin PilY1-like~SPTR: Q1VS23 Predicted phosphohydrolase gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2143 Trad_2144 Trad_2144 Trad_2144 2322566 2323585 + sulfotransferase KEGG: ttr:Tter_2805 sulfotransferase~SPTR: D1CIW9 Sulfotransferase gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2144 Trad_2145 Trad_2145 Trad_2145 2323740 2324993 - von Willebrand factor%2C type A COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain~KEGG: dge:Dgeo_0306 von Willebrand factor%2C type A~SPTR: Q9RRU4 Putative uncharacterized protein gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2145 Trad_2146 Trad_2146 Trad_2146 2325087 2326517 - magnesium protoporphyrin chelatase%2C putative COGs: COG1239 Mg-chelatase subunit ChlI~KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase%2C putative~SPTR: Q025X1 Magnesium protoporphyrin chelatase%2C putative~PFAM: Sigma-54 interaction domain gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2146 Trad_2147 Trad_2147 Trad_2147 2326924 2328879 + sodium/hydrogen exchanger COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter~InterPro IPR006153~KEGG: rce:RC1_2443 sodium/hydrogen exchanger family protein~PFAM: sodium/hydrogen exchanger~SPTR: Q0EW88 Putative sodium/hydrogen exchanger family protein~PFAM: Sodium/hydrogen exchanger family~TIGRFAM: Na+/H+ antiporter%2C bacterial form gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2147 Trad_2148 Trad_2148 Trad_2148 2328960 2330198 + competence/damage-inducible protein CinA COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA~InterPro IPR001453:IPR008135:IPR008136~KEGG: ddr:Deide_19430 putative CinA-like protein~PFAM: molybdopterin binding domain%3B CinA domain protein~SPTR: C1CXY3 CinA-like protein~TIGRFAM: competence/damage-inducible protein CinA~PFAM: Probable molybdopterin binding domain%3B Competence-damaged protein~TIGRFAM: competence/damage-inducible protein CinA N-terminal domain%3B competence/damage-inducible protein CinA C-terminal domain gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2148 Trad_2149 Trad_2149 Trad_2149 2330415 2331497 + recA protein COGs: COG0468 RecA/RadA recombinase~InterProIPR001553:IPR003593:IPR013765:IPR020584:IPR 020588:IPR020587~KEGG: dge:Dgeo_2138 recombinase A~PFAM: RecA domain protein~SMART: AAA ATPase~SPTR: C1XMY2 Protein recA~TIGRFAM: recA protein~PFAM: recA bacterial DNA recombination protein~TIGRFAM: protein RecA gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2149 Trad_2150 Trad_2150 Trad_2150 2331497 2333167 + metal dependent phosphohydrolase COGs: COG1418 HD superfamily hydrolase~InterProIPR004087:IPR003607:IPR018111:IPR006674:IPR 017705:IPR006675:IPR004088~KEGG: dge:Dgeo_0162 hypothetical protein~PFAM: metal-dependent phosphohydrolase HD sub domain%3B K Homology%2C type 1%2C subgroup~SMART: metal-dependent phosphohydrolase HD region%3B KH domain protein~SPTR: B7A502 RNA binding metal dependent phosphohydrolase~TIGRFAM: YmdA/YtgF protein%3B metal dependent phophohydrolase~PFAM: KH domain%3B HD domain%3B Domain of unknown function (DUF3552)~TIGRFAM: conserved hypothetical protein YmdA/YtgF%3B uncharacterized domain HDIG gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2150 Trad_2151 Trad_2151 Trad_2151 2333417 2334358 + ribose-phosphate pyrophosphokinase COGs: COG0462 Phosphoribosylpyrophosphate synthetase~InterPro IPR000836:IPR005946:IPR000842~KEGG: ttj:TTHA1549 ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase~PRIAM: Ribose-phosphate diphosphokinase~SPTR: Q72IE8 Ribose-phosphate pyrophosphokinase~TIGRFAM: ribose-phosphate pyrophosphokinase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: ribose-phosphate pyrophosphokinase gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2151 Trad_2152 Trad_2152 Trad_2152 2334389 2335015 + ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc)~InterProIPR011035:IPR020056:IPR020057:IPR020055:IPR 001021~KEGG: ttj:TTHA1589 50S ribosomal protein L25/general stress protein Ctc~PFAM: Ribosomal protein L25-like~SPTR: C1XWD8 LSU ribosomal protein L25P~TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5~PFAM: Ribosomal L25p family~TIGRFAM: ribosomal protein L25%2C Ctc-form gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2152 Trad_2153 Trad_2153 Trad_2153 2334996 2335598 + peptidyl-tRNA hydrolase COGs: COG0193 Peptidyl-tRNA hydrolase~InterPro IPR001328:IPR018171~KEGG: dge:Dgeo_2056 peptidyl-tRNA hydrolase~PFAM: peptidyl-tRNA hydrolase~PRIAM: Aminoacyl-tRNA hydrolase~SPTR: Q1IWN4 Peptidyl-tRNA hydrolase~TIGRFAM: peptidyl-tRNA hydrolase~PFAM: Peptidyl-tRNA hydrolase~TIGRFAM: peptidyl-tRNA hydrolase gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2153 Trad_2154 Trad_2154 Trad_2154 2335595 2336038 - Protein-tyrosine phosphatase%2C low molecular weight COGs: COG0394 Protein-tyrosine-phosphatase~InterPro IPR017867~KEGG: sat:SYN_00054 phosphotyrosine protein phosphatase~PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~SPTR: Q2LTF6 Phosphotyrosine protein phosphatase~PFAM: Low molecular weight phosphotyrosine protein phosphatase~TIGRFAM: arsenate reductase (thioredoxin) gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2154 Trad_2155 Trad_2155 Trad_2155 2336035 2336739 - major intrinsic protein COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family)~InterPro IPR000425~KEGG: gvi:glr0003 channel protein~PFAM: major intrinsic protein~SPTR: B9XPD5 MIP family channel protein~PFAM: Major intrinsic protein~TIGRFAM: MIP family channel proteins gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2155 Trad_2156 Trad_2156 Trad_2156 2336747 2337229 - Protein-tyrosine phosphatase%2C low molecular weight COGs: COG0394 Protein-tyrosine-phosphatase~InterPro IPR017867~KEGG: tth:TTC1502 arsenate reductase~PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~SPTR: C1XX97 Protein tyrosine phosphatase~PFAM: Low molecular weight phosphotyrosine protein phosphatase gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2156 Trad_2157 Trad_2157 Trad_2157 2337219 2337557 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR011991:IPR001845:IPR018334~KEGG: ddr:Deide_2p00101 putative transcriptional regulator%2C ArsR family~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: C1XMQ5 Transcriptional regulator%2C ArsR family~PFAM: Bacterial regulatory protein%2C arsR family gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2157 Trad_2158 Trad_2158 Trad_2158 2337815 2338660 + Xylose isomerase domain protein TIM barrel COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR013022:IPR012307~KEGG: rle:pRL80084 putative epimerase/isomerase~PFAM: Xylose isomerase domain protein TIM barrel~SPTR: C1XS42 Sugar phosphate isomerase/epimerase~PFAM: Xylose isomerase-like TIM barrel gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2158 Trad_2159 Trad_2159 Trad_2159 2338959 2339918 + metallophosphoesterase KEGG: cpi:Cpin_2624 metallophosphoesterase~SPTR: C7PJ22 Metallophosphoesterase gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2159 Trad_2160 Trad_2160 Trad_2160 2340093 2340608 + Secreted repeat of unknown function COGs: COG4315 conserved hypothetical protein~InterPro IPR014558:IPR005297:IPR010916~KEGG: bcv:Bcav_4095 secreted repeat of unknown function~PFAM: Secreted repeat of unknown function~SPTR: C4DID5 Uncharacterized conserved protein~PFAM: Secreted repeat of unknown function gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2160 Trad_2161 Trad_2161 Trad_2161 2340737 2341615 - alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000639:IPR000073~KEGG: mrd:Mrad2831_0619 alpha/beta hydrolase fold~PFAM: alpha/beta hydrolase fold~SPTR: B1LWC8 Alpha/beta hydrolase fold~PFAM: alpha/beta hydrolase fold gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2161 Trad_2162 Trad_2162 Trad_2162 2341732 2342970 - beta-lactamase COGs: COG1680 Beta-lactamase class C and other penicillin binding protein~InterPro IPR012338:IPR001466~KEGG: rca:Rcas_2359 beta-lactamase~PFAM: beta-lactamase~SPTR: A7NLP6 Beta-lactamase~PFAM: Beta-lactamase gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2162 Trad_2163 Trad_2163 Trad_2163 2343245 2343784 + transcriptional regulator%2C TetR family InterPro IPR001647:IPR009057:IPR012287~KEGG: rxy:Rxyl_1320 TetR family transcriptional regulator~PFAM: regulatory protein TetR~SPTR: Q1AWE4 Transcriptional regulator%2C TetR family~PFAM: Bacterial regulatory proteins%2C tetR family gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2163 Trad_2164 Trad_2164 Trad_2164 2343784 2344227 + conserved hypothetical protein KEGG: nth:Nther_0623 hypothetical protein~SPTR: D1JBN0 Conserved hypothetical membrane protein~PFAM: Putative small multi-drug export protein gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2164 Trad_2165 Trad_2165 Trad_2165 2344224 2345498 - (Uracil-5)-methyltransferase COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase~InterPro IPR010280:IPR002792~KEGG: dge:Dgeo_1777 (uracil-5)-methyltransferase~PFAM: (Uracil-5)-methyltransferase~SPTR: Q1IXG2 (Uracil-5)-methyltransferase~PFAM: tRNA (Uracil-5-)-methyltransferase~TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2165 Trad_2166 Trad_2166 Trad_2166 2345785 2346402 + hypothetical protein KEGG: nfa:nfa42510 putative serine/threonine protein kinase~SPTR: C1XYU9 Putative uncharacterized protein gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2166 Trad_2167 Trad_2167 Trad_2167 2346631 2347392 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR016040~KEGG: ddr:Deide_07550 putative oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: C1D192 Putative oxidoreductase~PFAM: short chain dehydrogenase gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2167 Trad_2168 Trad_2168 Trad_2168 2347409 2348443 - isopentenyl-diphosphate delta-isomerase%2C type 2 COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase~InterPro IPR013785:IPR011179:IPR000262~KEGG: mjl:Mjls_1934 isopentenyl pyrophosphate isomerase~PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~PRIAM: Isopentenyl-diphosphate Delta-isomerase~SPTR: C1XVQ3 Isopentenyl-diphosphate delta-isomerase%2C type 2~TIGRFAM: isopentenyl-diphosphate delta-isomerase%2C type 2~PFAM: FMN-dependent dehydrogenase~TIGRFAM: isopentenyl-diphosphate delta-isomerase%2C type 2 gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2168 Trad_2169 Trad_2169 Trad_2169 2348528 2349997 + peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209~KEGG: ade:Adeh_0234 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~SPTR: C1XI07 Subtilisin-like serine protease~PFAM: Subtilase family gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2169 Trad_2170 Trad_2170 Trad_2170 2350738 2351601 - Rhodanese domain protein COGs: COG2897 Rhodanese-related sulfurtransferase~InterPro IPR001763:IPR001307~KEGG: dra:DR_2531 thiosulfate sulfurtransferase~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~SPTR: C1XXM1 Rhodanese-related sulfurtransferase~PFAM: Rhodanese-like domain gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2170 Trad_2171 Trad_2171 Trad_2171 2351628 2352905 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR001958:IPR016196:IPR011701:IPR005829~KEGG: rba:RB990 tetracycline-efflux transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Q7UXZ3 Tetracycline-efflux transporter~PFAM: Major Facilitator Superfamily~TIGRFAM: Multidrug resistance protein gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2171 Trad_2172 Trad_2172 Trad_2172 2353090 2353920 + tRNA/rRNA methyltransferase (SpoU) COGs: COG0566 rRNA methylase~InterPro IPR013123:IPR001537~KEGG: dra:DR_1017 rRNA methylase~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~SPTR: Q7SID4 Transferase~PFAM: SpoU rRNA Methylase family%3B RNA 2'-O ribose methyltransferase substrate binding gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2172 Trad_2173 Trad_2173 Trad_2173 2353972 2354835 + Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase COGs: COG0388 amidohydrolase~InterPro IPR003010~KEGG: tth:TTC1539 beta-ureidopropionase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~SPTR: C1XRE1 Predicted amidohydrolase~PFAM: Carbon-nitrogen hydrolase gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2173 Trad_2174 Trad_2174 Trad_2174 2354832 2355722 + NAD+ synthetase COGs: COG0171 NAD synthase~InterPro IPR014729:IPR003694~KEGG: ttj:TTHA1900 NH(3)-dependent NAD(+) synthetase~PFAM: NAD synthase~SPTR: C1XRE2 NH(3)-dependent NAD(+) synthetase~TIGRFAM: NAD+ synthetase~PFAM: NAD synthase~TIGRFAM: NAD+ synthetase gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2174 Trad_2175 Trad_2175 Trad_2175 2355884 2356246 + pseudogene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2175 Trad_2176 Trad_2176 Trad_2176 2356312 2356725 + large conductance mechanosensitive channel protein COGs: COG1970 Large-conductance mechanosensitive channel~InterPro IPR001185~KEGG: cyb:CYB_1404 large conductance mechanosensitive channel protein~PFAM: large-conductance mechanosensitive channel~SPTR: Q2JLN5 Large-conductance mechanosensitive channel~TIGRFAM: large conductance mechanosensitive channel protein~PFAM: Large-conductance mechanosensitive channel%2C MscL~TIGRFAM: large conductance mechanosensitive channel protein gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2176 Trad_2177 Trad_2177 Trad_2177 2356743 2356904 + Uncharacterized conserved protein UCP037205 InterPro IPR017136~KEGG: jan:Jann_1844 hypothetical protein~PFAM: Uncharacterised conserved protein UCP037205~SPTR: B7RPF2 Putative uncharacterized protein~manually curated~PFAM: Uncharacterized protein conserved in bacteria (DUF2256) gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2177 Trad_2178 Trad_2178 Trad_2178 2356915 2357823 - UspA domain protein InterPro IPR006015:IPR014729:IPR006016~KEGG: sul:SYO3AOP1_1359 UspA domain protein~PFAM: UspA domain protein~SPTR: C1XRX2 Universal stress protein UspA-like protein~PFAM: Universal stress protein family gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2178 Trad_2179 Trad_2179 Trad_2179 2357954 2359288 - Uncharacterized protein with the myosin-like domain protein COGs: COG4372 Uncharacterized protein with the myosin-like domain~KEGG: ttj:TTHA0440 hypothetical protein~SPTR: C9KMF2 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3084) gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2179 Trad_2180 Trad_2180 Trad_2180 2359309 2360103 - ABC transporter related protein COGs: COG1137 ABC-type (unclassified) transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: dra:DR_2134 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q9RSJ0 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2180 Trad_2181 Trad_2181 Trad_2181 2360231 2361265 + Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterProIPR011032:IPR016040:IPR013154:IPR013149:IPR 002328~KEGG: bcv:Bcav_4187 alcohol dehydrogenase GroES domain protein~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: C6J1G3 Sorbitol dehydrogenase~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase~TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2181 Trad_2182 Trad_2182 Trad_2182 2361449 2362759 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: dge:Dgeo_2821 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q1J2N4 ABC-type sugar transport system%2C periplasmic component~PFAM: Bacterial extracellular solute-binding protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2182 Trad_2183 Trad_2183 Trad_2183 2362858 2363730 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_2820 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1J2N5 ABC-type sugar transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2183 Trad_2184 Trad_2184 Trad_2184 2363727 2364593 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: ddr:Deide_1p01620 putative sugar ABC transporter%2C permease component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1D2H3 Putative sugar ABC transporter%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2184 Trad_2185 Trad_2185 Trad_2185 2364593 2365414 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR016040~KEGG: ttr:Tter_2006 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: D1CGN9 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2185 Trad_2186 Trad_2186 Trad_2186 2365411 2366427 + Alcohol dehydrogenase zinc-binding domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterPro IPR011032:IPR016040:IPR013154:IPR013149~KEGG: rba:RB5948 Zn-dependent alcohol dehydrogenase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~SPTR: Q7UR16 Probable alcohol dehydrogenase (Zn-dependent)~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase~TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2186 Trad_2187 Trad_2187 Trad_2187 2366619 2369321 + 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type COGs: COG2609 Pyruvate dehydrogenase complex dehydrogenase (E1) component~InterPro IPR009014:IPR015941:IPR004660~KEGG: noc:Noc_1254 pyruvate dehydrogenase subunit E1~SPTR: Q3JBP1 2-oxo-acid dehydrogenase E1 component homodimeric type~TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type~PFAM: Transketolase%2C thiamine diphosphate binding domain~TIGRFAM: pyruvate dehydrogenase E1 component%2C homodimeric type gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2187 Trad_2188 Trad_2188 Trad_2188 2369544 2370977 + catalytic domain of components of various dehydrogenase complexes COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein~InterProIPR011053:IPR004167:IPR000089:IPR001078:IPR 017441:IPR003016~KEGG: dra:DR_0256 pyruvate dehydrogenase complex%2C dihydrolipoamide acetyltransferase E2 component~PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein~SPTR: C1XL93 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase component~PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)%3B e3 binding domain%3B Biotin-requiring enzyme~TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase%2C long form gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2188 Trad_2189 Trad_2189 Trad_2189 2371051 2371299 - conserved hypothetical protein KEGG: bga:BG0523 hypothetical protein~SPTR: B7XU11 Putative uncharacterized protein gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2189 Trad_2190 Trad_2190 Trad_2190 2371398 2371529 - hypothetical protein KEGG: rce:RC1_2904 hypothetical protein~SPTR: B6IVE8 Putative uncharacterized protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2190 Trad_2191 Trad_2191 Trad_2191 2371553 2371768 - pseudogene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2191 Trad_2192 Trad_2192 Trad_2192 2371797 2372591 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR016040~KEGG: bid:Bind_2338 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B2IHG6 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2192 Trad_2193 Trad_2193 Trad_2193 2372762 2374270 + phytoene desaturase COGs: COG1233 Phytoene dehydrogenase and related protein~InterPro IPR002937:IPR014105:IPR008150~KEGG: hau:Haur_3185 zeta-phytoene desaturase~PFAM: amine oxidase~SPTR: A9B6V4 Zeta-phytoene desaturase~TIGRFAM: phytoene desaturase~PFAM: Flavin containing amine oxidoreductase~TIGRFAM: phytoene desaturase gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2193 Trad_2194 Trad_2194 Trad_2194 2374473 2375636 + Nucleotidyl transferase COGs: COG0448 ADP-glucose pyrophosphorylase~InterPro IPR005835:IPR005836~KEGG: krh:KRH_09330 glucose-1-phosphate adenylyltransferase~PFAM: Nucleotidyl transferase~SPTR: B2GLI7 Glucose-1-phosphate adenylyltransferase~PFAM: Nucleotidyl transferase gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2194 Trad_2195 Trad_2195 Trad_2195 2375691 2376830 - monooxygenase FAD-binding protein COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase~InterPro IPR003042:IPR002938~KEGG: ddr:Deide_21790 putative oxidoreductase~PFAM: monooxygenase FAD-binding~SPTR: C1CZF7 Putative oxidoreductase~PFAM: FAD binding domain gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2195 Trad_2196 Trad_2196 Trad_2196 2376820 2377509 - Methyltransferase type 11 COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase~InterPro IPR013216~KEGG: bfa:Bfae_04540 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1%2C4-benzoquinol methylase~PFAM: Methyltransferase type 11~SPTR: C7MHB5 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1%2C 4-benzoquinol methylase~PFAM: Methyltransferase domain gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2196 Trad_2197 Trad_2197 Trad_2197 2377509 2378582 - chalcone and stilbene synthase domain protein COGs: COG3424 naringenin-chalcone synthase~InterProIPR016039:IPR016038:IPR011141:IPR001099:IPR 012328~KEGG: ddr:Deide_21770 putative naringenin-chalcone synthase (flavonone synthase%2C 6-deoxychalcone synthase)~PFAM: chalcone and stilbene synthase domain protein~SPTR: C1CZF5 Putative naringenin-chalcone synthase (Flavonone synthase%2C 6-deoxychalcone synthase)~PFAM: Chalcone and stilbene synthases%2C N-terminal domain%3B Chalcone and stilbene synthases%2C C-terminal domain gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2197 Trad_2198 Trad_2198 Trad_2198 2378832 2379560 + MTA/SAH nucleosidase COGs: COG0775 Nucleoside phosphorylase~InterPro IPR000845:IPR010049~KEGG: dra:DR_1451 5'-methylthioadenosine/S-adenosylhomocysteine nuclosidase~PFAM: purine or other phosphorylase family 1~PRIAM: Adenosylhomocysteine nucleosidase~SPTR: Q9RUD6 5`-methylthioadenosine/S-adenosylhomocysteine nuclosidase~TIGRFAM: MTA/SAH nucleosidase~PFAM: Phosphorylase superfamily~TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2198 Trad_2199 Trad_2199 Trad_2199 2379895 2380095 + putative alanine-rich protein KEGG: sco:SCP2.25c putative alanine-rich protein~SPTR: Q8VWC9 Putative alanine-rich protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2199 Trad_2200 Trad_2200 Trad_2200 2380143 2381078 + hypothetical protein KEGG: dge:Dgeo_0031 hypothetical protein~SPTR: C1XME5 Putative uncharacterized protein gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2200 Trad_2201 Trad_2201 Trad_2201 2381075 2381470 + Protein of unknown function DUF2089 COGs: COG3877 conserved hypothetical protein~InterPro IPR018658~KEGG: dra:DR_0017 hypothetical protein~PFAM: Protein of unknown function DUF2089~SPTR: B7A5E2 Putative uncharacterized protein~PFAM: Protein of unknown function(DUF2089) gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2201 Trad_2202 Trad_2202 Trad_2202 2381772 2382317 + hypothetical protein KEGG: sti:Sthe_2410 hypothetical protein~SPTR: D1C7V5 Putative uncharacterized protein gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2202 Trad_2203 Trad_2203 Trad_2203 2382320 2382733 + protein of unknown function DUF1469 InterPro IPR009937~KEGG: sti:Sthe_2409 protein of unknown function DUF1469~PFAM: protein of unknown function DUF1469~SPTR: D1C7V4 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF1469) gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2203 Trad_2204 Trad_2204 Trad_2204 2382730 2383335 + hypothetical protein KEGG: sti:Sthe_2408 hypothetical protein~SPTR: D1C7V3 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3618) gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2204 Trad_2205 Trad_2205 Trad_2205 2383764 2385203 + 3-isopropylmalate dehydratase%2C large subunit COGs: COG0065 3-isopropylmalate dehydratase large subunit~InterProIPR001030:IPR015931:IPR015932:IPR004430:IPR 018136~KEGG: ote:Oter_2680 isopropylmalate isomerase large subunit~PFAM: aconitate hydratase domain protein~SPTR: C1XUF9 3-isopropylmalate dehydratase%2C large subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit~PFAM: Aconitase family (aconitate hydratase)~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2205 Trad_2206 Trad_2206 Trad_2206 2385205 2385801 + 3-isopropylmalate dehydratase%2C small subunit COGs: COG0066 3-isopropylmalate dehydratase small subunit~InterPro IPR015928:IPR000573:IPR004431~KEGG: ote:Oter_2681 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain protein~SPTR: B1ZUZ2 3-isopropylmalate dehydratase%2C small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: Aconitase C-terminal domain~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2206 Trad_2207 Trad_2207 Trad_2207 2385811 2386197 - conserved hypothetical protein KEGG: smt:Smal_2414 hypothetical protein~SPTR: B4SMQ5 Putative uncharacterized protein gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2207 Trad_2208 Trad_2208 Trad_2208 2386283 2387368 + 3-isopropylmalate dehydrogenase COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase~InterPro IPR001804:IPR004429:IPR019818~KEGG: ttj:TTHA1230 3-isopropylmalate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase~PRIAM: 3-isopropylmalate dehydrogenase~SPTR: B7A7R3 3-isopropylmalate dehydrogenase~TIGRFAM: 3-isopropylmalate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase~TIGRFAM: 3-isopropylmalate dehydrogenase gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2208 Trad_2209 Trad_2209 Trad_2209 2387642 2388577 + alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073~KEGG: cag:Cagg_2157 alpha/beta hydrolase fold protein~PFAM: alpha/beta hydrolase fold~SPTR: B8GCJ7 Alpha/beta hydrolase fold protein~PFAM: alpha/beta hydrolase fold gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2209 Trad_2210 Trad_2210 Trad_2210 2388612 2389139 + molybdenum cofactor synthesis domain protein COGs: COG0521 Molybdopterin biosynthesis protein~InterPro IPR001453:IPR012245:IPR020817~KEGG: dra:DR_1292 molybdenum cofactor biosynthesis protein B~PFAM: molybdopterin binding domain~SPTR: Q9RUT9 Molybdenum cofactor biosynthesis protein B~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: Probable molybdopterin binding domain~TIGRFAM: molybdenum cofactor synthesis domain gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2210 Trad_2211 Trad_2211 Trad_2211 2389147 2390328 + aminotransferase class I and II COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR015424:IPR015421:IPR004839~KEGG: cag:Cagg_1395 aminotransferase class I and II~PFAM: aminotransferase class I and II~SPTR: B8G8P0 Aminotransferase class I and II~PFAM: Aminotransferase class I and II gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2211 Trad_2212 Trad_2212 Trad_2212 2390328 2391032 + conserved hypothetical protein KEGG: dge:Dgeo_1678 hypothetical protein~SPTR: Q1IXR1 P-loop ATPase gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2212 Trad_2213 Trad_2213 Trad_2213 2391032 2392108 + Mandelate racemase/muconate lactonizing protein COGs: COG4948 L-alanine-DL-glutamate epimerase~InterPro IPR013342:IPR018110~KEGG: dge:Dgeo_1679 mandelate racemase/muconate lactonizing-like protein~PFAM: Mandelate racemase/muconate lactonizing protein~SPTR: Q1IXR0 Mandelate racemase/muconate lactonizing enzyme-like protein~PFAM: Mandelate racemase / muconate lactonizing enzyme%2C C-terminal domain%3B Mandelate racemase / muconate lactonizing enzyme%2C N-terminal domain gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2213 Trad_2214 Trad_2214 Trad_2214 2392150 2394282 - glycyl-tRNA synthetase%2C beta subunit COGs: COG0751 Glycyl-tRNA synthetase beta subunit~InterPro IPR002311:IPR015944:IPR006194~KEGG: pca:Pcar_0599 glycyl-tRNA synthetase subunit beta~PFAM: glycyl-tRNA synthetase beta subunit~PRIAM: Glycine--tRNA ligase~SPTR: Q1K046 Glycine--tRNA ligase~TIGRFAM: glycyl-tRNA synthetase%2C beta subunit~PFAM: Glycyl-tRNA synthetase beta subunit~TIGRFAM: glycyl-tRNA synthetase%2C tetrameric type%2C beta subunit gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2214 Trad_2215 Trad_2215 Trad_2215 2394282 2395145 - glycyl-tRNA synthetase%2C alpha subunit COGs: COG0752 Glycyl-tRNA synthetase alpha subunit~InterPro IPR002310:IPR006194~KEGG: pca:Pcar_0598 glycyl-tRNA synthetase subunit alpha~PFAM: glycyl-tRNA synthetase alpha subunit~PRIAM: Glycine--tRNA ligase~SPTR: Q3A8N6 Glycyl-tRNA synthetase alpha subunit~TIGRFAM: glycyl-tRNA synthetase%2C alpha subunit~PFAM: Glycyl-tRNA synthetase alpha subunit~TIGRFAM: glycyl-tRNA synthetase%2C tetrameric type%2C alpha subunit gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2215 Trad_2216 Trad_2216 Trad_2216 2395415 2397619 + ATPase AAA-2 domain protein COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterProIPR001270:IPR003593:IPR004176:IPR003959:IPR 013093:IPR019489:IPR018368~KEGG: ttj:TTHA0542 ATP-dependent Clp protease%2C ATP-binding subunit (ClpA)~PFAM: ATPase AAA-2 domain protein%3B Clp domain protein%3B AAA ATPase central domain protein%3B Clp ATPase-like~SMART: AAA ATPase~SPTR: Q72L86 ATP-dependent clp protease ATP-binding subunit clpA~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B Clp amino terminal domain%3B ATPase family associated with various cellular activities (AAA) gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2216 Trad_2217 Trad_2217 Trad_2217 2397697 2399043 + DNA repair protein RadA COGs: COG1066 ATP-dependent serine protease~InterPro IPR004504:IPR020568:IPR003593~KEGG: dge:Dgeo_1212 DNA repair protein RadA~SMART: AAA ATPase~SPTR: Q1IZ25 DNA repair protein radA~TIGRFAM: DNA repair protein RadA~PFAM: KaiC%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: DNA repair protein RadA gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2217 Trad_2218 Trad_2218 Trad_2218 2399109 2400083 + PilT protein domain protein COGs: COG4956 Integral membrane protein (PIN domain superfamily)~InterPro IPR002716:IPR002792~KEGG: ttj:TTHA0540 hypothetical protein~PFAM: PilT protein domain protein~SPTR: Q5SKV3 Putative uncharacterized protein TTHA0540~PFAM: PIN domain gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2218 Trad_2219 Trad_2219 Trad_2219 2400067 2400609 - hypothetical protein KEGG: mmr:Mmar10_2764 hypothetical protein~SPTR: Q0AKZ7 Putative uncharacterized protein gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2219 Trad_2220 Trad_2220 Trad_2220 2400612 2401811 - transposase%2C IS605 OrfB family COGs: COG0675 Transposase and inactivated derivatives~InterPro IPR001959:IPR010095:IPR007087~KEGG: cyc:PCC7424_1224 transposase%2C IS605 OrfB family~PFAM: putative transposase IS891/IS1136/IS1341 family%3B transposase IS605 OrfB~SPTR: B5W808 Transposase%2C IS605 OrfB family~TIGRFAM: transposase%2C IS605 OrfB family~PFAM: Putative transposase DNA-binding domain%3B Probable transposase~TIGRFAM: transposase%2C IS605 OrfB family%2C central region gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2220 Trad_2221 Trad_2221 Trad_2221 2401835 2402350 - Capsular polysaccharide synthesis COGs: COG3774 Mannosyltransferase OCH1~InterPro IPR008441~KEGG: mmr:Mmar10_2764 hypothetical protein~PFAM: Capsular polysaccharide synthesis~SPTR: Q0AKZ7 Putative uncharacterized protein~PFAM: Capsular polysaccharide synthesis protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2221 Trad_2222 Trad_2222 Trad_2222 2402510 2402821 - hypothetical protein InterPro IPR012336:IPR012335~KEGG: gvi:gll2565 hypothetical protein~SPTR: B9YQZ2 Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2222 Trad_2223 Trad_2223 Trad_2223 2403129 2404787 - Glucose-6-phosphate isomerase COGs: COG0166 Glucose-6-phosphate isomerase~InterPro IPR001672:IPR018189~KEGG: mca:MCA1247 glucose-6-phosphate isomerase~PFAM: phosphoglucose isomerase (PGI)~PRIAM: Glucose-6-phosphate isomerase~SPTR: Q609I7 Glucose-6-phosphate isomerase~PFAM: Phosphoglucose isomerase gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2223 Trad_2224 Trad_2224 Trad_2224 2404897 2405763 + 4-hydroxybenzoate polyprenyltransferase COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase~InterPro IPR000537:IPR006371:IPR018483~KEGG: ttj:TTHA0605 4-hydroxybenzoate octaprenyltransferase~PFAM: UbiA prenyltransferase~SPTR: C1XND1 4-hydroxybenzoate octaprenyltransferase~TIGRFAM: 4-hydroxybenzoate polyprenyltransferase~PFAM: UbiA prenyltransferase family~TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2224 Trad_2225 Trad_2225 Trad_2225 2407750 2413209 + transcription elongation factor GreA/GreB domain protein COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits~InterPro IPR011335:IPR001437~KEGG: cyn:Cyan7425_3149 hypothetical protein~PFAM: transcription elongation factor GreA/GreB domain protein~SPTR: B8HN08 Putative uncharacterized protein~PFAM: Transcription elongation factor%2C GreA/GreB%2C C-term%3B Protein of unknown function (DUF559) gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2225 Trad_2226 Trad_2226 Trad_2226 2413299 2414021 - protein of unknown function DUF541 COGs: COG2968 conserved hypothetical protein~InterPro IPR007497~KEGG: ttr:Tter_0885 protein of unknown function DUF541~PFAM: protein of unknown function DUF541~SPTR: D1CFU6 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF541) gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2226 Trad_2227 Trad_2227 Trad_2227 2414349 2414618 - hypothetical protein KEGG: hypothetical protein~SPTR: B7A9I2 Aminotransferase class I and II gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2227 Trad_2228 Trad_2228 Trad_2228 2414659 2416242 - Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR016161:IPR016162:IPR015590:IPR016160~KEGG: tth:TTC0513 aldehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: C1XFA0 Delta-1-piperideine-6-carboxylate dehydrogenase~PFAM: Aldehyde dehydrogenase family gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2228 Trad_2229 Trad_2229 Trad_2229 2416465 2417412 - hypothetical protein InterPro IPR009056~KEGG: dge:Dgeo_0810 cytochrome c%2C class I~SPTR: C1XTX3 Cytochrome c553~PFAM: Cytochrome c gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2229 Trad_2230 Trad_2230 Trad_2230 2417468 2418856 - oxidoreductase FAD/NAD(P)-binding domain protein COGs: COG4097 ferric reductase~InterProIPR001221:IPR017938:IPR013130:IPR008333:IPR 001433:IPR017927~KEGG: ana:all2633 hypothetical protein~PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B Ferric reductase domain protein transmembrane component domain%3B Oxidoreductase FAD-binding domain protein~SPTR: C4SU03 Predicted ferric reductase~PFAM: Oxidoreductase FAD-binding domain%3B Ferric reductase like transmembrane component%3B Oxidoreductase NAD-binding domain gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2230 Trad_2231 Trad_2231 Trad_2231 2419046 2420575 + hypothetical protein InterPro IPR011044:IPR015943~KEGG: hoh:Hoch_0196 WD40 repeat%2C subgroup~SPTR: Q2HD61 Putative uncharacterized protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2231 Trad_2232 Trad_2232 Trad_2232 2420554 2421483 - conserved hypothetical protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: dra:DR_0462 hypothetical protein~SPTR: Q9RX53 Putative uncharacterized protein~PFAM: Periplasmic binding protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2232 Trad_2233 Trad_2233 Trad_2233 2421458 2422246 - periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: ddr:Deide_12970 putative iron siderophore/cobalamin (vitamine B12) ABC transporter%2C periplasmic component~PFAM: periplasmic binding protein~SPTR: C1XX90 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component~PFAM: Periplasmic binding protein gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2233 Trad_2234 Trad_2234 Trad_2234 2422248 2422832 - ATP/cobalamin adenosyltransferase COGs: COG2096 conserved hypothetical protein~InterPro IPR016030:IPR002779:IPR017858~KEGG: ttj:TTHA1926 ATP:cob(I)alamin adenosyltransferase~PFAM: cobalamin adenosyltransferase~PRIAM: Cob(I)yrinic acid a%2Cc-diamide adenosyltransferase~SPTR: B7A8E4 ATP/cobalamin adenosyltransferase~TIGRFAM: ATP/cobalamin adenosyltransferase~PFAM: Cobalamin adenosyltransferase~TIGRFAM: ATP:cob(I)alamin adenosyltransferase gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2234 Trad_2235 Trad_2235 Trad_2235 2423036 2423518 + conserved hypothetical protein InterPro IPR008162~KEGG: afw:Anae109_4137 hypothetical protein~SPTR: A7HHW9 Putative uncharacterized protein gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2235 Trad_2236 Trad_2236 Trad_2236 2423613 2424788 + protein of unknown function DUF418 COGs: COG2311 membrane protein~InterPro IPR007299:IPR007349~KEGG: rca:Rcas_4423 hypothetical protein~PFAM: protein of unknown function DUF418%3B protein of unknown function DUF405~SPTR: A7NS93 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF418) gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2236 Trad_2237 Trad_2237 Trad_2237 2424800 2425255 + Abortive infection protein COGs: COG4449 protease of the Abi (CAAX) family~InterPro IPR003675~KEGG: mmr:Mmar10_0696 abortive infection protein~PFAM: Abortive infection protein~SPTR: Q0ARU8 Abortive infection protein~PFAM: CAAX amino terminal protease family gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2237 Trad_2238 Trad_2238 Trad_2238 2425303 2426490 + protein of unknown function DUF405 COGs: COG2311 membrane protein~InterPro IPR007299:IPR007349~KEGG: bha:BH3693 hypothetical protein~PFAM: protein of unknown function DUF405%3B protein of unknown function DUF418~SPTR: Q9K6N5 BH3693 protein~PFAM: Protein of unknown function (DUF418) gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2238 Trad_2239 Trad_2239 Trad_2239 2426796 2427311 - hypothetical protein KEGG: oxidoreductase 2-nitropropane dioxygenase family%2C putative~SPTR: B8NMM6 Oxidoreductase 2-nitropropane dioxygenase family%2C putative gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2239 Trad_2240 Trad_2240 Trad_2240 2427655 2428501 - pseudogene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2240 Trad_2241 Trad_2241 Trad_2241 2428641 2430077 - phytoene desaturase COGs: COG1233 Phytoene dehydrogenase and related protein~InterPro IPR006076:IPR014105~KEGG: ddr:Deide_2p01180 putative FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase~SPTR: C1XLI5 Phytoene dehydrogenase-like oxidoreductase~TIGRFAM: phytoene desaturase~PFAM: FAD dependent oxidoreductase~TIGRFAM: phytoene desaturase gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2241 Trad_2242 Trad_2242 Trad_2242 2430074 2431168 - glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: dra:DR_0089 hypothetical protein~PFAM: glycosyl transferase family 2~SPTR: C1XLI6 Glycosyl transferase~PFAM: Glycosyl transferase family 2 gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2242 Trad_2243 Trad_2243 Trad_2243 2431165 2433306 - lycopene cyclase domain protein COGs: COG2324 membrane protein~InterPro IPR002123:IPR007354:IPR017825:IPR005829~KEGG: ddr:Deide_2p01210 hypothetical protein%3B putative membrane protein~PFAM: protein of unknown function DUF422%3B phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~SPTR: C1D2Z9 Putative uncharacterized protein~TIGRFAM: lycopene cyclase domain protein~PFAM: Acyltransferase%3B Protein of unknown function (DUF422)~TIGRFAM: lycopene cyclase domain gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2243 Trad_2244 Trad_2244 Trad_2244 2433483 2435021 - FAD dependent oxidoreductase COGs: COG1233 Phytoene dehydrogenase and related protein~InterPro IPR006076~KEGG: sru:SRU_1502 beta-carotene ketolase~PFAM: FAD dependent oxidoreductase~SPTR: Q2S2F6 Beta-carotene ketolase~PFAM: FAD dependent oxidoreductase gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2244 Trad_2245 Trad_2245 Trad_2245 2435228 2437135 + hypothetical protein KEGG: met:M446_6067 hypothetical protein~SPTR: C6QIR7 Putative uncharacterized protein gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2245 Trad_2246 Trad_2246 Trad_2246 2437136 2437453 + protein of unknown function DUF74 COGs: COG0393 conserved hypothetical protein~InterPro IPR002765~KEGG: lsp:Bsph_3249 hypothetical protein~PFAM: protein of unknown function DUF74~SPTR: A3I9K1 Putative uncharacterized protein~PFAM: Domain of unknown function (DUF74) gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2246 Trad_2247 Trad_2247 Trad_2247 2437742 2438233 - hypothetical protein KEGG: gvi:glr2527 hypothetical protein~SPTR: Q7NHK8 Glr2527 protein gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2247 Trad_2248 Trad_2248 Trad_2248 2438675 2439574 - Phytoene synthase COGs: COG1562 Phytoene/squalene synthetase~InterPro IPR008949:IPR002060:IPR019845~KEGG: dge:Dgeo_0523 squalene/phytoene synthase~PFAM: Squalene/phytoene synthase~PRIAM: Phytoene synthase~SPTR: Q1J109 Phytoene synthase%2C CrtB~PFAM: Squalene/phytoene synthase gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2248 Trad_2249 Trad_2249 Trad_2249 2439775 2441004 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis~InterPro IPR011005:IPR016425:IPR004588~KEGG: dge:Dgeo_0704 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~PFAM: IspG family protein~SPTR: Q1J0H8 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase~PFAM: GcpE protein~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2249 Trad_2250 Trad_2250 Trad_2250 2441247 2442257 + short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR002347:IPR002198:IPR016040~KEGG: mno:Mnod_7667 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B8IQV2 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2250 Trad_2251 Trad_2251 Trad_2251 2442341 2442916 + intracellular protease%2C PfpI family COGs: COG0693 Putative intracellular protease/amidase~InterPro IPR002818:IPR006286~KEGG: mpo:Mpop_0320 intracellular protease%2C PfpI family~PFAM: ThiJ/PfpI domain protein~SPTR: B1ZI15 Intracellular protease%2C PfpI family~TIGRFAM: intracellular protease%2C PfpI family~PFAM: DJ-1/PfpI family~TIGRFAM: intracellular protease%2C PfpI family gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2251 Trad_2252 Trad_2252 Trad_2252 2443017 2443901 + rhodopsin InterPro IPR001425~KEGG: sru:SRU_1500 xanthorhodopsin~PFAM: rhodopsin~SPTR: Q0FYH0 Putative uncharacterized protein~PFAM: Bacteriorhodopsin-like protein gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2252 Trad_2253 Trad_2253 Trad_2253 2443964 2445016 + hypothetical protein KEGG: nmu:Nmul_A2008 hypothetical protein~SPTR: B9ZER4 Putative uncharacterized protein gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2253 Trad_2254 Trad_2254 Trad_2254 2445128 2446159 - NMT1/THI5 like domain protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR015168~KEGG: ttr:Tter_1222 NMT1/THI5 like domain protein~PFAM: NMT1/THI5 like domain protein~SPTR: D1CBG5 NMT1/THI5 like domain protein~PFAM: NMT1/THI5 like gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2254 Trad_2255 Trad_2255 Trad_2255 2446159 2446983 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: ttr:Tter_1221 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: D1CBG4 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2255 Trad_2256 Trad_2256 Trad_2256 2446980 2447765 - ABC transporter related protein COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: sma:SAV_1340 ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C8NXX6 ABC superfamily ATP binding cassette transporter%2C ABC protein~PFAM: ABC transporter gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2256 Trad_2257 Trad_2257 Trad_2257 2447762 2448451 - transcriptional activator%2C TenA family COGs: COG0819 Putative transcription activator~InterPro IPR016084:IPR004305~KEGG: gyc:GYMC61_1410 transcriptional activator%2C TenA family~PFAM: TENA/THI-4 domain protein~SPTR: C9RX49 Transcriptional activator%2C TenA family~PFAM: TENA/THI-4/PQQC family gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2257 Trad_2258 Trad_2258 Trad_2258 2448448 2449023 - YKOF domain protein InterPro IPR016198:IPR011522~KEGG: rle:RL4399 hypothetical protein~PFAM: YKOF domain protein~SPTR: Q1MAZ9 Putative uncharacterized protein~PFAM: YKOF-related Family gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2258 Trad_2259 Trad_2259 Trad_2259 2449252 2450079 - inositol monophosphatase COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family~InterPro IPR000760:IPR020583~KEGG: rxy:Rxyl_0695 histidinol-phosphate phosphatase~PFAM: inositol monophosphatase~SPTR: Q1AY63 Histidinol-phosphate phosphatase~PFAM: Inositol monophosphatase family~TIGRFAM: histidinol-phosphate phosphatase HisN%2C inositol monophosphatase family gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2259 Trad_2260 Trad_2260 Trad_2260 2450231 2451379 + deoxyguanosinetriphosphate triphosphohydrolase COGs: COG0232 dGTP triphosphohydrolase~InterPro IPR003607:IPR006674:IPR006261~KEGG: tth:TTC0044 dNTP triphosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: C1XP76 Deoxyguanosinetriphosphate triphosphohydrolase%2C putative~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase~PFAM: HD domain~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase%2C putative%3B uncharacterized domain HDIG gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2260 Trad_2261 Trad_2261 Trad_2261 2451411 2452463 - ATPase-like%2C ParA/MinD COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR002744:IPR019591:IPR000808~KEGG: ttj:TTHA0654 ATP-binding Mrp/Nbp35 family protein~PFAM: ATPase-like%2C ParA/MinD%3B protein of unknown function DUF59~SPTR: C1XP99 ATPase involved in chromosome partitioning~PFAM: ParA/MinD ATPase like%3B Domain of unknown function DUF59 gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2261 Trad_2262 Trad_2262 Trad_2262 2452684 2454177 + putative CheA signal transduction histidine kinase InterPro IPR011009:IPR002290:IPR001245~KEGG: tcu:Tcur_0795 serine/threonine protein kinase~PFAM: tyrosine protein kinase~SMART: serine/threonine protein kinase~SPTR: D1A5M6 Serine/threonine protein kinase gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2262 Trad_2263 Trad_2263 Trad_2263 2454260 2455837 + GMP synthase%2C large subunit COGs: COG0519 GMP synthase PP-ATPase domain/subunit~InterProIPR011702:IPR001317:IPR014729:IPR000991:IPR 011063:IPR001674:IPR004739:IPR017926~KEGG: dge:Dgeo_0598 GMP synthase~PFAM: GMP synthase domain protein%3B glutamine amidotransferase class-I%3B PP-loop domain protein~SPTR: Q1J0T4 GMP synthase [glutamine-hydrolyzing]~TIGRFAM: GMP synthase%2C large subunit%3B GMP synthase%2C small subunit~PFAM: Glutamine amidotransferase class-I%3B GMP synthase C terminal domain~TIGRFAM: GMP synthase (glutamine-hydrolyzing)%2C C-terminal domain or B subunit%3B GMP synthase (glutamine-hydrolyzing)%2C N-terminal domain or A subunit gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2263 Trad_2264 Trad_2264 Trad_2264 2455908 2457095 - hypothetical protein InterPro IPR011042:IPR005829~KEGG: sfu:Sfum_2299 fibronectin%2C type III~SPTR: A0LKM9 Fibronectin%2C type III gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2264 Trad_2265 Trad_2265 Trad_2265 2457306 2457815 + protein of unknown function DUF55 COGs: COG2947 conserved hypothetical protein~InterPro IPR002740~KEGG: dge:Dgeo_2026 hypothetical protein~PFAM: protein of unknown function DUF55~SPTR: Q1IWR4 Putative uncharacterized protein~PFAM: Protein of unknown function DUF55 gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2265 Trad_2266 Trad_2266 Trad_2266 2457812 2459008 + amidohydrolase COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase~InterPro IPR011650:IPR017439:IPR002933:IPR010168~KEGG: bha:BH1613 N-acyl-L-amino acid amidohydrolase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: C1XUG6 Amidohydrolase~TIGRFAM: amidohydrolase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: amidohydrolase gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2266 Trad_2267 Trad_2267 Trad_2267 2459078 2460058 + Negative regulator of class I heat shock protein COGs: COG1420 Transcriptional regulator of heat shock gene~InterPro IPR011991:IPR002571~KEGG: ttj:TTHA0058 transcriptional repressor of class I heat-shock genes~PFAM: Negative regulator of class I heat shock protein~SPTR: C1XS63 Heat-inducible transcription repressor HrcA~PFAM: DeoR-like helix-turn-helix domain%3B HrcA protein C terminal domain~TIGRFAM: heat shock gene repressor HrcA gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2267 Trad_2268 Trad_2268 Trad_2268 2460045 2460749 + molybdopterin converting factor%2C subunit 1 COGs: COG0314 Molybdopterin converting factor large subunit~InterProIPR003448:IPR016155:IPR012675:IPR003749:IPR 010034~KEGG: ttj:TTHA0059 molybdenum cofactor biosynthesis protein D/E~PFAM: thiamineS protein%3B molybdopterin biosynthesis MoaE protein~SPTR: Q5SM84 Molybdenum cofactor biosynthesis protein D/E~TIGRFAM: molybdopterin converting factor%2C subunit 1~PFAM: ThiS family%3B MoaE protein~TIGRFAM: molybdopterin converting factor%2C subunit 1%2C non-archaeal gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2268 Trad_2269 Trad_2269 Trad_2269 2460794 2461762 - aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395~KEGG: sus:Acid_5923 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: Q01U06 Aldo/keto reductase~PFAM: Aldo/keto reductase family gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2269 Trad_2270 Trad_2270 Trad_2270 2461990 2462745 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR016040~KEGG: npu:Npun_R0578 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B2J890 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2270 Trad_2271 Trad_2271 Trad_2271 2462920 2463477 + GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR016181:IPR000182~KEGG: ttj:TTHA1575 kanamycin resistance protein-related protein~PFAM: GCN5-related N-acetyltransferase~SPTR: Q72IC2 Putative uncharacterized protein~PFAM: Acetyltransferase (GNAT) family gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2271 Trad_2273 Trad_2273 Trad_2273 2465497 2467134 + ABC transporter related protein COGs: COG3845 ABC-type uncharacterized transport systems ATPase components~InterPro IPR003593:IPR003439:IPR017871~KEGG: ttj:TTHA1099 sugar ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q72JN6 Sugar transport ATP-binding protein~PFAM: ABC transporter gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2273 Trad_2274 Trad_2274 Trad_2274 2467349 2469286 + glycoside hydrolase 15-related protein COGs: COG3387 Glucoamylase and related glycosyl hydrolase~InterPro IPR008928:IPR012341:IPR011613~KEGG: ttr:Tter_2035 glycoside hydrolase 15-related protein~PFAM: glycoside hydrolase 15-related~SPTR: B5H854 Glycoside hydrolase~PFAM: Glycosyl hydrolases family 15 gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2274 Trad_2275 Trad_2275 Trad_2275 2469279 2470646 + glucose-6-phosphate 1-dehydrogenase COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase~InterPro IPR001282:IPR016040:IPR019796~KEGG: ach:Achl_2230 glucose-6-phosphate 1-dehydrogenase~PFAM: glucose-6-phosphate dehydrogenase~PRIAM: Glucose-6-phosphate dehydrogenase~SPTR: C0TZR3 Glucose-6-phosphate 1-dehydrogenase~TIGRFAM: glucose-6-phosphate 1-dehydrogenase~PFAM: Glucose-6-phosphate dehydrogenase%2C NAD binding domain%3B Glucose-6-phosphate dehydrogenase%2C C-terminal domain~TIGRFAM: glucose-6-phosphate 1-dehydrogenase gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2275 Trad_2276 Trad_2276 Trad_2276 2470698 2471192 + GCN5-related N-acetyltransferase InterPro IPR016181:IPR000182~KEGG: vha:VIBHAR_06922 hypothetical protein~PFAM: GCN5-related N-acetyltransferase~SPTR: D0X5F5 Putative uncharacterized protein~PFAM: Acetyltransferase (GNAT) family gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2276 Trad_2277 Trad_2277 Trad_2277 2471205 2472389 - homoserine O-acetyltransferase COGs: COG2021 Homoserine acetyltransferase~InterPro IPR008220:IPR000073:IPR006296~KEGG: chy:CHY_1903 homoserine O-acetyltransferase~PFAM: alpha/beta hydrolase fold~PRIAM: Homoserine O-acetyltransferase~SPTR: Q3AAW2 Homoserine O-acetyltransferase~TIGRFAM: homoserine O-acetyltransferase~PFAM: alpha/beta hydrolase fold~TIGRFAM: homoserine O-acetyltransferase gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2277 Trad_2278 Trad_2278 Trad_2278 2472394 2473785 - Cysteine synthase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterPro IPR015424:IPR015421:IPR015422:IPR000277~KEGG: cpc:Cpar_0621 O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~PRIAM: Cysteine synthase~SPTR: Q8KES8 O-acetylhomoserine (Thiol)-lyase~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2278 Trad_2279 Trad_2279 Trad_2279 2473782 2475086 - O-acetylhomoserine/O-acetylserine sulfhydrylase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterProIPR015424:IPR015421:IPR015422:IPR000277:IPR 006235~KEGG: dge:Dgeo_0518 O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~SPTR: Q1J114 O-acetylhomoserine/O-acetylserine sulfhydrylase~TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism PLP-dependent enzyme~TIGRFAM: OAH/OAS sulfhydrylase gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2279 Trad_2280 Trad_2280 Trad_2280 2475755 2476906 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_2918 ABC-type sugar transport system%2C permease component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XQP6 Carbohydrate ABC transporter membrane protein 1%2C CUT1 family~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2280 Trad_2281 Trad_2281 Trad_2281 2476899 2477840 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: cbl:CLK_0995 carbohydrate ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B1L1N1 Carbohydrate uptake ABC transporter%2C CUT1 family%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2281 Trad_2282 Trad_2282 Trad_2282 2477924 2479255 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: tnp:Tnap_0378 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: C7I867 Extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding protein gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2282 Trad_2283 Trad_2283 Trad_2283 2479349 2479831 - GCN5-related N-acetyltransferase InterPro IPR016181:IPR000182~KEGG: dge:Dgeo_0078 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Q1J2A3 GCN5-related N-acetyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2283 Trad_2284 Trad_2284 Trad_2284 2480085 2481122 + peptidase M19 renal dipeptidase COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog~InterPro IPR008257~KEGG: dge:Dgeo_1112 peptidase M19%2C renal dipeptidase~PFAM: peptidase M19 renal dipeptidase~SPTR: Q1IZC4 Dipeptidase M19~PFAM: Membrane dipeptidase (Peptidase family M19) gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2284 Trad_2285 Trad_2285 Trad_2285 2481171 2482259 + dihydrouridine synthase DuS COGs: COG0042 tRNA-dihydrouridine synthase~InterPro IPR013785:IPR001269:IPR018517~KEGG: dge:Dgeo_0077 dihydrouridine synthase%2C DuS~PFAM: dihydrouridine synthase DuS~SPTR: Q1J2A4 Dihydrouridine synthase%2C DuS~PFAM: Dihydrouridine synthase (Dus)~TIGRFAM: putative TIM-barrel protein%2C nifR3 family gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2285 Trad_2286 Trad_2286 Trad_2286 2482533 2482772 + preprotein translocase%2C SecG subunit InterPro IPR004692~KEGG: ach:Achl_1831 preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit~SPTR: B8H7M7 Preprotein translocase%2C SecG subunit~TIGRFAM: preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit~TIGRFAM: protein translocase%2C SecG subunit gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2286 Trad_2287 Trad_2287 Trad_2287 2483371 2485188 + extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: ttj:TTHA0469 peptide ABC transporter%2C periplasmic peptide-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: Q5SL24 Peptide ABC transporter%2C periplasmic peptide-binding protein~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2287 Trad_2288 Trad_2288 Trad_2288 2485321 2486301 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: ttj:TTHA0470 peptide ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B7A6T4 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2288 Trad_2289 Trad_2289 Trad_2289 2486301 2487512 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_1342 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1IYP7 ABC-type oligopeptide transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2289 Trad_2290 Trad_2290 Trad_2290 2487599 2488615 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterProIPR003593:IPR003439:IPR013563:IPR010066:IPR 017871~KEGG: ttj:TTHA0472 peptide ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: C1XW30 Oligopeptide/dipeptide ABC transporter%2C ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2290 Trad_2291 Trad_2291 Trad_2291 2488612 2489670 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterProIPR003593:IPR003439:IPR013563:IPR010066:IPR 017871~KEGG: dge:Dgeo_1340 oligopeptide/dipeptide ABC transporter%2C ATP-binding protein-like protein~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: Q1IYP9 ABC-type oligopeptide transport system%2C ATPase component~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2291 Trad_2292 Trad_2292 Trad_2292 2491485 2493104 - L-fucose isomerase _2 domain protein InterPro IPR009015:IPR012889~KEGG: ddr:Deide_3p00140 putative L-fucose isomerase and L-arabinose isomerase family~PFAM: L-fucose isomerase _2 domain protein~SPTR: C1D435 Putative L-fucose isomerase and L-arabinose isomerase family gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2292 Trad_2293 Trad_2293 Trad_2293 2493113 2493784 - Transaldolase COGs: COG0176 Transaldolase~InterPro IPR013785:IPR001585:IPR018225~KEGG: vap:Vapar_1114 transaldolase~PFAM: Transaldolase~SPTR: C5CPP4 Transaldolase~PFAM: Transaldolase~TIGRFAM: transaldolase%2C putative%2C TalC family gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2293 Trad_2294 Trad_2294 Trad_2294 2493802 2494773 - inner-membrane translocator COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components~InterPro IPR001851~KEGG: rhi:NGR_c33700 putative sugar ABC transporter%2C permease protein~PFAM: inner-membrane translocator~SPTR: C3MB91 Putative sugar ABC transporter%2C permease protein~PFAM: Branched-chain amino acid transport system / permease component gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2294 Trad_2295 Trad_2295 Trad_2295 2494770 2496299 - ABC transporter related protein COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: mlo:mlr3336 ATP-binding protein%2C sugar ABC transporter (ribose)~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q98GG8 ATP-binding protein%2C sugar ABC transporter (Ribose)~PFAM: ABC transporter gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2295 Trad_2296 Trad_2296 Trad_2296 2496361 2497314 - periplasmic binding protein/LacI transcriptional regulator COGs: COG1879 ABC-type sugar transport system periplasmic component~InterPro IPR001761~KEGG: smd:Smed_3227 periplasmic binding protein/LacI transcriptional regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator~SPTR: A6UEH1 Periplasmic binding protein/LacI transcriptional regulator~PFAM: family gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2296 Trad_2297 Trad_2297 Trad_2297 2497618 2498919 - sulfatase COGs: COG3119 Arylsulfatase A~InterPro IPR017850:IPR017849:IPR000917~KEGG: rxy:Rxyl_2349 sulfatase~PFAM: sulfatase~SPTR: Q1ATK1 Sulfatase~PFAM: Sulfatase gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2297 Trad_2298 Trad_2298 Trad_2298 2498973 2500520 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: gym:GYMC10_6051 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: C6J083 Extracellular solute-binding protein%2C family 1~PFAM: Bacterial extracellular solute-binding protein gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2298 Trad_2299 Trad_2299 Trad_2299 2500691 2501590 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: pjd:Pjdr2_1483 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C6CWU4 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2299 Trad_2300 Trad_2300 Trad_2300 2501584 2502528 - binding-protein-dependent transport systems inner membrane component COGs: COG4209 ABC-type polysaccharide transport system permease component~InterPro IPR000515~KEGG: oih:OB3209 hypothetical protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q8ELL5 Hypothetical conserved protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2300 Trad_2301 Trad_2301 Trad_2301 2502679 2502849 + glycoside hydrolase family 5 KEGG: jde:Jden_0734 glycoside hydrolase family 5~SPTR: C7R1T0 Glycoside hydrolase family 5 gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2301 Trad_2302 Trad_2302 Trad_2302 2503098 2503439 - hypothetical protein KEGG: jan:Jann_2068 uracil-DNA glycosylase superfamily protein~SPTR: Q28QM7 Uracil-DNA glycosylase superfamily gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2302 Trad_2303 Trad_2303 Trad_2303 2503430 2503996 - hypothetical protein KEGG: hypothetical protein %3B K06115 spectrin beta~SPTR: B5H2G8 Mandelate racemase/muconate lactonizing protein gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2303 Trad_2304 Trad_2304 Trad_2304 2507700 2508011 - CRISPR-associated protein Cas2 InterPro IPR010152~KEGG: ttj:TTHB194 hypothetical protein~PFAM: CRISPR-associated protein Cas2~SPTR: C1XG05 CRISPR-associated protein%2C Cas2 family~TIGRFAM: CRISPR-associated protein Cas2~PFAM: CRISPR-associated protein (Cas_Cas2CT1978)~TIGRFAM: CRISPR-associated protein Cas2%2C E. coli subfamily gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2304 Trad_2305 Trad_2305 Trad_2305 2507965 2508927 - CRISPR-associated protein Cas1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR002729:IPR019851~KEGG: ttj:TTHB193 hypothetical protein~PFAM: protein of unknown function DUF48~SPTR: C1XG04 CRISPR-associated protein%2C Cas1 family~TIGRFAM: CRISPR-associated protein Cas1~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated protein Cas1%3B CRISPR-associated protein Cas1%2C ECOLI subtype gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2305 Trad_2306 Trad_2306 Trad_2306 2508931 2509563 - CRISPR-associated protein%2C Cse3 family InterPro IPR010179~KEGG: dge:Dgeo_2634 CRISPR-associated CSE3 family protein~PFAM: CRISPR-associated protein CT1974~SPTR: Q1J366 CRISPR-associated protein%2C CT1974~TIGRFAM: CRISPR-associated protein%2C Cse3 family~PFAM: CRISPR associated protein~TIGRFAM: CRISPR-associated protein%2C Cse3 family gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2306 Trad_2307 Trad_2307 Trad_2307 2509538 2510230 - CRISPR-associated protein Cas5 family InterPro IPR010147:IPR013422~KEGG: ppd:Ppro_2339 CRISPR-associated Cas5 family protein~PFAM: CRISPR-associated protein CT1976~SPTR: C1XG02 CRISPR-associated protein%2C Cas5e family~TIGRFAM: CRISPR-associated protein Cas5 family%3B CRISPR-associated protein Cas5~PFAM: CRISPR-associated protein (Cas_Cas5)~TIGRFAM: CRISPR-associated protein Cas5%2C N-terminal domain%3B CRISPR-associated protein Cas5%2C Ecoli subtype gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2307 Trad_2308 Trad_2308 Trad_2308 2510232 2511410 - CRISPR-associated protein%2C Cse4 family InterPro IPR010148~KEGG: dge:Dgeo_2632 CRISPR-associated CSE4 family protein~PFAM: CRISPR-associated protein CT1975~SPTR: C1XG01 CRISPR-associated protein%2C Cse4 family~TIGRFAM: CRISPR-associated protein%2C Cse4 family~PFAM: CT1975-like protein~TIGRFAM: CRISPR-associated protein%2C Cse4 family gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2308 Trad_2309 Trad_2309 Trad_2309 2511407 2511997 - CRISPR-associated protein%2C Cse2 family InterPro IPR013382~KEGG: ppd:Ppro_2341 CRISPR-associated CSE2 family protein~PFAM: CRISPR-associated protein Cse2~SPTR: C1XFZ9 CRISPR-associated protein%2C Cse2 family~TIGRFAM: CRISPR-associated protein%2C Cse2 family~PFAM: CRISPR-associated protein Cse2 (CRISPR_cse2)~TIGRFAM: CRISPR-associated protein%2C Cse2 family gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2309 Trad_2310 Trad_2310 Trad_2310 2511981 2513519 - CRISPR-associated protein%2C Cse1 family InterPro IPR013381~KEGG: ttj:TTHB188 hypothetical protein~PFAM: CRISPR-associated protein Cse1~SPTR: C1XFZ8 CRISPR-associated protein%2C Cse1 family~TIGRFAM: CRISPR-associated protein%2C Cse1 family~PFAM: CRISPR-associated protein Cse1 (CRISPR_cse1)~TIGRFAM: CRISPR-associated protein%2C Cse1 family gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2310 Trad_2311 Trad_2311 Trad_2311 2513572 2513988 - hypothetical protein KEGG: Paramyosin~SPTR: C1XYI0 Putative uncharacterized protein gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2311 Trad_2312 Trad_2312 Trad_2312 2513985 2516675 - CRISPR-associated helicase Cas3 COGs: COG1203 helicase~InterPro IPR001650:IPR006474:IPR014021~KEGG: dge:Dgeo_2629 CRISPR-associated helicase Cas3 family protein protein~PFAM: helicase domain protein~SMART: helicase domain protein~SPTR: C1XFZ7 CRISPR-associated helicase Cas3~TIGRFAM: CRISPR-associated helicase Cas3~PFAM: DEAD/DEAH box helicase~TIGRFAM: CRISPR-associated helicase Cas3 gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2312 Trad_2313 Trad_2313 Trad_2313 2516701 2517681 - Helix-turn-helix type 11 domain protein COGs: COG2378 transcriptional regulator protein~InterPro IPR013196~KEGG: ttj:TTHB186 putative transcriptional regulator~PFAM: Helix-turn-helix type 11 domain protein~SPTR: Q53VY3 Putative transcriptional regulator~PFAM: HTH domain gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2313 Trad_2314 Trad_2314 Trad_2314 2518264 2519100 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR011055:IPR002482:IPR018392:IPR016047~KEGG: ttj:TTHA0703 cell wall endopeptidase~PFAM: Peptidase M23%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM~SPTR: A1HRW7 Peptidase M23B~PFAM: Peptidase family M23%3B LysM domain gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2314 Trad_2315 Trad_2315 Trad_2315 2519158 2520792 - transcription termination factor Rho COGs: COG1158 Transcription termination factor~InterProIPR011112:IPR011129:IPR003593:IPR011113:IPR 000194:IPR004665~KEGG: ttj:TTHA1065 transcription termination factor Rho~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B Rho termination factor RNA-binding%3B Rho termination factor domain protein~SMART: AAA ATPase%3B Cold shock protein~SPTR: C1XQR3 Transcription termination factor Rho~TIGRFAM: transcription termination factor Rho~PFAM: Rho termination factor%2C N-terminal domain%3B Rho termination factor%2C RNA-binding domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: transcription termination factor Rho gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2315 Trad_2316 Trad_2316 Trad_2316 2521659 2524979 + isoleucyl-tRNA synthetase COGs: COG0060 Isoleucyl-tRNA synthetase~InterProIPR015905:IPR009080:IPR009008:IPR014729:IPR 002300:IPR013155:IPR002301~KEGG: rca:Rcas_0322 isoleucyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ia%3B tRNA synthetase valyl/leucyl anticodon-binding~SPTR: A7NG68 Isoleucyl-tRNA synthetase~TIGRFAM: isoleucyl-tRNA synthetase~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain~TIGRFAM: isoleucyl-tRNA synthetase gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2316 Trad_2317 Trad_2317 Trad_2317 2525170 2526039 - ribonuclease BN COGs: COG1295 membrane protein~InterPro IPR004664:IPR017039~KEGG: ppu:PP_4560 ribonuclease BN%2C putative~PFAM: ribonuclease BN~SPTR: Q88EA6 Ribonuclease BN%2C putative~TIGRFAM: ribonuclease BN~PFAM: Ribonuclease BN-like family~TIGRFAM: YihY family protein (not ribonuclease BN) gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2317 Trad_2318 Trad_2318 Trad_2318 2526293 2527285 + glyceraldehyde-3-phosphate dehydrogenase%2C type I COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase~InterProIPR020832:IPR016040:IPR020831:IPR020828:IPR 020829:IPR006424:IPR020830~KEGG: tth:TTC0549 glyceraldehyde 3-phosphate dehydrogenase~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain~PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)~SPTR: B7A7G7 Glyceraldehyde-3-phosphate dehydrogenase%2C type I~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2318 Trad_2319 Trad_2319 Trad_2319 2527489 2528667 + Phosphoglycerate kinase COGs: COG0126 3-phosphoglycerate kinase~InterPro IPR001576:IPR015824:IPR015901:IPR015911~KEGG: mta:Moth_0263 phosphoglycerate kinase~PFAM: phosphoglycerate kinase~PRIAM: Phosphoglycerate kinase~SPTR: C1XQP2 Phosphoglycerate kinase~PFAM: Phosphoglycerate kinase gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2319 Trad_2320 Trad_2320 Trad_2320 2528801 2530090 + conserved hypothetical protein KEGG: pmy:Pmen_1025 hypothetical protein~SPTR: A4XR27 Putative uncharacterized protein gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2320 Trad_2321 Trad_2321 Trad_2321 2530182 2530832 - hypothetical protein InterPro IPR008162~KEGG: tth:TTC1924 hypothetical protein~SPTR: Q72GC4 Putative uncharacterized protein gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2321 Trad_2322 Trad_2322 Trad_2322 2530874 2532016 - acyl-CoA dehydrogenase domain protein COGs: COG1960 Acyl-CoA dehydrogenase~InterProIPR009100:IPR009075:IPR013786:IPR006091:IPR 013764:IPR006092:IPR006090:IPR006089~KEGG: ttj:TTHA1144 acetyl-coenzyme A dehydrogenase%2C medium chain~PFAM: acyl-CoA dehydrogenase domain protein~SPTR: Q72JJ3 Putative acyl-CoA dehydrogenase~PFAM: Acyl-CoA dehydrogenase%2C C-terminal domain%3B Acyl-CoA dehydrogenase%2C middle domain%3B Acyl-CoA dehydrogenase%2C N-terminal domain gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2322 Trad_2323 Trad_2323 Trad_2323 2532092 2532460 - hypothetical protein KEGG: pfo:Pfl01_3192 hypothetical protein~SPTR: C1XRC0 Putative uncharacterized protein gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2323 Trad_2324 Trad_2324 Trad_2324 2532460 2533605 - acyl-CoA dehydrogenase domain protein COGs: COG1960 Acyl-CoA dehydrogenase~InterProIPR009100:IPR009075:IPR013786:IPR006091:IPR 013764:IPR006092:IPR006090:IPR006089~KEGG: ttj:TTHA1916 acyl-CoA dehydrogenase~PFAM: acyl-CoA dehydrogenase domain protein~SPTR: B7A8W5 Acyl-CoA dehydrogenase domain protein~PFAM: Acyl-CoA dehydrogenase%2C C-terminal domain%3B Acyl-CoA dehydrogenase%2C middle domain%3B Acyl-CoA dehydrogenase%2C N-terminal domain gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2324 Trad_2325 Trad_2325 Trad_2325 2534076 2534426 + hypothetical protein KEGG: bpt:Bpet3818 transcriptional regulator~SPTR: A9I3E7 Transcriptional regulator/sugar-binding domain%2C LacI family gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2325 Trad_2326 Trad_2326 Trad_2326 2534483 2535124 + hypothetical protein KEGG: eca:ECA1100 hypothetical protein~SPTR: Q6D875 Putative uncharacterized protein gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2326 Trad_2327 Trad_2327 Trad_2327 2535253 2535663 - conserved hypothetical protein COGs: COG3296 conserved hypothetical protein~KEGG: syn:slr0686 hypothetical protein~SPTR: B5VY07 Putative uncharacterized protein gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2327 Trad_2328 Trad_2328 Trad_2328 2535750 2536316 + hypothetical protein KEGG: hsl:OE1737R molecular chaperone DnaK~SPTR: Q9HRY2 Chaperone protein dnaK gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2328 Trad_2329 Trad_2329 Trad_2329 2536547 2537767 + tryptophan synthase%2C beta subunit COGs: COG0133 Tryptophan synthase beta chain~InterPro IPR001926:IPR006654:IPR006653~KEGG: dge:Dgeo_1024 tryptophan synthase subunit beta~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~SPTR: C1XT16 Tryptophan synthase%2C beta chain~TIGRFAM: tryptophan synthase%2C beta subunit~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: tryptophan synthase%2C beta subunit gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2329 Trad_2330 Trad_2330 Trad_2330 2537754 2538557 + tryptophan synthase%2C alpha subunit COGs: COG0159 Tryptophan synthase alpha chain~InterPro IPR011060:IPR013785:IPR002028:IPR018204~KEGG: ttj:TTHA1094 tryptophan synthase subunit alpha~PFAM: tryptophan synthase alpha chain~PRIAM: Tryptophan synthase~SPTR: B7A6G4 Tryptophan synthase alpha chain~TIGRFAM: tryptophan synthase%2C alpha subunit~PFAM: Tryptophan synthase alpha chain~TIGRFAM: tryptophan synthase%2C alpha subunit gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2330 Trad_2331 Trad_2331 Trad_2331 2538644 2539240 - rare lipoprotein A COGs: COG0797 Lipoprotein~InterPro IPR009009:IPR005132:IPR012997~KEGG: cjd:JJD26997_1353 rare lipoprotein A~PFAM: Rare lipoprotein A~SPTR: A0YQB9 Putative uncharacterized protein~TIGRFAM: rare lipoprotein A~PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel~TIGRFAM: rare lipoprotein A gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2331 Trad_2332 Trad_2332 Trad_2332 2539277 2539663 - hypothetical protein KEGG: SORBIDRAFT_02g037830%3B hypothetical protein %3B K01868 threonyl-tRNA synthetase~SPTR: C5XD23 Putative uncharacterized protein Sb02g037830 gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2332 Trad_2333 Trad_2333 Trad_2333 2539830 2540606 + hydrolase%2C TatD family COGs: COG0084 Mg-dependent DNase~InterPro IPR012278:IPR001130:IPR015991:IPR018228~KEGG: dge:Dgeo_0151 TatD-related deoxyribonuclease~PFAM: TatD-related deoxyribonuclease~SPTR: Q1J230 TatD-related deoxyribonuclease~TIGRFAM: hydrolase%2C TatD family~PFAM: TatD related DNase~TIGRFAM: hydrolase%2C TatD family gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2333 Trad_2334 Trad_2334 Trad_2334 2540593 2541015 - conserved hypothetical protein KEGG: ttj:TTHA1293 hypothetical protein~SPTR: C1XNN6 Putative uncharacterized protein gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2334 Trad_2335 Trad_2335 Trad_2335 2541557 2541790 + conserved hypothetical protein KEGG: dge:Dgeo_0039 hypothetical protein~SPTR: Q1J2E2 Putative uncharacterized protein gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2335 Trad_2336 Trad_2336 Trad_2336 2541787 2542728 + alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR002410:IPR000073~KEGG: ddr:Deide_19220 putative proline iminopeptidase~PFAM: alpha/beta hydrolase fold~SPTR: C1CXW0 Putative proline iminopeptidase~PFAM: alpha/beta hydrolase fold gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2336 Trad_2337 Trad_2337 Trad_2337 2542782 2543372 + HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668 COGs: COG2179 hydrolase of the HAD superfamily~InterPro IPR005834:IPR010021:IPR006549~KEGG: ddr:Deide_19620 putative hydrolase%2C HAD-superfamily~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: C1CY07 Putative hydrolase%2C HAD-superfamily~TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668%3B hydrolase%2C HAD-superfamily%2C subfamily IIIA~PFAM: Protein of unknown function~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIIA%3B HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668 gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2337 Trad_2338 Trad_2338 Trad_2338 2543354 2546005 + type II secretion system protein E COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB~InterPro IPR007831:IPR001482~KEGG: dge:Dgeo_0263 type II secretion system protein E~PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein~SPTR: C1XNT4 Type II secretory pathway%2C ATPase PulE/Tfp pilus assembly pathway%2C ATPase PilB~PFAM: GSPII_E N-terminal domain%3B Type II/IV secretion system protein gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2338 Trad_2339 Trad_2339 Trad_2339 2546043 2547194 + twitching motility protein COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT~InterPro IPR003593:IPR001482:IPR006321~KEGG: ttj:TTHA0365 type IV pilus assembly protein%2C pilus retraction protein PilT~PFAM: type II secretion system protein E~SMART: AAA ATPase~SPTR: C1XIB2 Pilus retraction ATPase PilT~TIGRFAM: twitching motility protein~PFAM: Type II/IV secretion system protein~TIGRFAM: pilus retraction protein PilT gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2339 Trad_2340 Trad_2340 Trad_2340 2547453 2550156 + pseudogene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2340 Trad_2341 Trad_2341 Trad_2341 2550156 2550929 + hypothetical protein KEGG: jan:Jann_2318 Bcr/CflA subfamily drug resistance transporter~SPTR: Q28PX7 Drug resistance transporter Bcr/CflA subfamily gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2341 Trad_2342 Trad_2342 Trad_2342 2550981 2551805 - FMN-dependent alpha-hydroxy acid dehydrogenase COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase~InterPro IPR013785:IPR000262~KEGG: adg:Adeg_1075 FMN-dependent alpha-hydroxy acid dehydrogenase~PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~SPTR: C9RD75 FMN-dependent alpha-hydroxy acid dehydrogenase~PFAM: FMN-dependent dehydrogenase gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2342 Trad_2343 Trad_2343 Trad_2343 2552442 2553203 + ABC transporter related protein COGs: COG4555 ABC-type Na+ transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: dra:DR_0927 sodium extrusion protein NatA~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q9RVU5 Sodium extrusion protein NatA~PFAM: ABC transporter gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2343 Trad_2344 Trad_2344 Trad_2344 2553200 2554417 + ABC-2 type transporter COGs: COG1668 ABC-type Na+ efflux pump permease component~KEGG: dge:Dgeo_1676 ABC-2 type transporter~SPTR: C1XT42 ABC-type Na+ efflux pump%2C permease component gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2344 Trad_2345 Trad_2345 Trad_2345 2554450 2555166 - major intrinsic protein COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family)~InterPro IPR000425~KEGG: dge:Dgeo_1799 major intrinsic protein~PFAM: major intrinsic protein~SPTR: Q1IXE0 Glycerol uptake facilitator GlpF%2C MIP/aquaporin family of transporters~PFAM: Major intrinsic protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2345 Trad_2346 Trad_2346 Trad_2346 2555462 2556583 - conserved hypothetical protein KEGG: dge:Dgeo_1195 hypothetical protein~SPTR: Q1IZ42 Putative uncharacterized protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2346 Trad_2347 Trad_2347 Trad_2347 2556688 2558481 + conserved hypothetical protein KEGG: dau:Daud_2097 hypothetical protein~SPTR: B1I6B9 Putative uncharacterized protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2347 Trad_2348 Trad_2348 Trad_2348 2558710 2558955 + hypothetical protein KEGG: GF18178 gene product from transcript GF18178-RA~SPTR: C4CT25 Amidohydrolase%2C imidazolonepropionase gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2348 Trad_2349 Trad_2349 Trad_2349 2558937 2560763 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR011527:IPR003593:IPR001140:IPR003439:IPR 017940~KEGG: bcv:Bcav_3580 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: C5C2X8 ABC transporter related~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2349 Trad_2350 Trad_2350 Trad_2350 2560767 2562599 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR011527:IPR003593:IPR001140:IPR003439:IPR 017871:IPR017940~KEGG: bcv:Bcav_3581 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: C5C2X9 ABC transporter related~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2350 Trad_2351 Trad_2351 Trad_2351 2563171 2564268 - ABC transporter related protein COGs: COG3839 ABC-type sugar transport systems ATPase components~InterProIPR008995:IPR003593:IPR003439:IPR013611:IPR 017871~KEGG: tth:TTC0211 sugar-binding transport ATP-binding protein~PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~SPTR: C1XQ97 Carbohydrate ABC transporter ATP-binding protein%2C CUT1 family~PFAM: ABC transporter%3B TOBE domain gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2351 Trad_2352 Trad_2352 Trad_2352 2564477 2565379 + arginase COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family~InterPro IPR005924:IPR006035:IPR014033~KEGG: dge:Dgeo_0292 arginase~PFAM: Arginase/agmatinase/formiminoglutamase~SPTR: Q1J1N9 Arginase~TIGRFAM: arginase~PFAM: Arginase family~TIGRFAM: arginase gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2352 Trad_2353 Trad_2353 Trad_2353 2565823 2570982 + DNA polymerase III%2C alpha subunit COGs: COG0587 DNA polymerase III alpha subunit~InterProIPR006142:IPR016195:IPR003141:IPR003587:IPR 003586:IPR004013:IPR011708:IPR004365:IPR004805:IPR006141:I PR004042~KEGG: ttj:TTHA0180 DNA polymerase III alpha subunit~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~PRIAM: DNA-directed DNA polymerase~SMART: phosphoesterase PHP domain protein%3B Hedgehog/intein hint domain protein~SPTR: B7ABG0 DNA polymerase III%2C alpha subunit~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: Bacterial DNA polymerase III alpha subunit%3B PHP domain%3B OB-fold nucleic acid binding domain~TIGRFAM: intein N-terminal splicing region%3B intein C-terminal splicing region%3B DNA-directed DNA polymerase III (polc) gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2353 Trad_2354 Trad_2354 Trad_2354 2571115 2571708 + cation efflux protein COGs: COG1230 Co/Zn/Cd efflux system component~InterPro IPR002524~KEGG: mlo:mlr2295 transporter~PFAM: cation efflux protein~SPTR: Q98IQ9 Probable transporter~PFAM: Cation efflux family gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2354 Trad_2355 Trad_2355 Trad_2355 2571926 2573038 + chaperone protein DnaJ COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~InterProIPR003095:IPR001623:IPR008971:IPR001305:IPR 002939:IPR012724:IPR018253~KEGG: dge:Dgeo_0451 chaperone DnaJ-like protein~PFAM: chaperone DnaJ domain protein%3B heat shock protein DnaJ domain protein%3B DnaJ central domain protein~SMART: heat shock protein DnaJ domain protein~SPTR: Q1J180 Chaperone protein dnaJ~TIGRFAM: chaperone protein DnaJ~PFAM: DnaJ C terminal region%3B DnaJ central domain (4 repeats)%3B DnaJ domain~TIGRFAM: chaperone protein DnaJ gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2355 Trad_2356 Trad_2356 Trad_2356 2573145 2574005 - ABC transporter related protein COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003593:IPR003439~KEGG: ddr:Deide_14410 putative branched-chain amino acid ABC transporter%2C ATP-binding component~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1CW25 Putative branched-chain amino acid ABC transporter%2C ATP-binding component~PFAM: ABC transporter gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2356 Trad_2357 Trad_2357 Trad_2357 2574053 2575252 - leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~KEGG: tth:TTC0082 leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein~SPTR: Q72LH7 Leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2357 Trad_2358 Trad_2358 Trad_2358 2575408 2576520 - inner-membrane translocator COGs: COG4177 ABC-type branched-chain amino acid transport system permease component~InterPro IPR001851~KEGG: ttj:TTHA0450 branched-chain amino acid ABC transporter%2C permease protein~PFAM: inner-membrane translocator~SPTR: Q5SL43 Branched-chain amino acid ABC transporter%2C permease protein~PFAM: Branched-chain amino acid transport system / permease component gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2358 Trad_2359 Trad_2359 Trad_2359 2576631 2577536 - inner-membrane translocator COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components~InterPro IPR001851~KEGG: tth:TTC0080 branched-chain amino acid transport system permease protein LivH~PFAM: inner-membrane translocator~SPTR: C1XUL9 Branched-chain amino acid ABC-type transport system%2C permease component~PFAM: Branched-chain amino acid transport system / permease component gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2359 Trad_2360 Trad_2360 Trad_2360 2577533 2579503 - AMP-dependent synthetase and ligase COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming)~InterPro IPR000873:IPR020845~KEGG: tth:TTC0079 long-chain-fatty-acid-CoA ligase~PFAM: AMP-dependent synthetase and ligase~SPTR: C1XUM0 AMP-forming long-chain acyl-CoA synthetase~PFAM: AMP-binding enzyme gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2360 Trad_2361 Trad_2361 Trad_2361 2579494 2580282 - ABC transporter related protein COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003593:IPR003439~KEGG: ddr:Deide_14460 putative branched-chain amino acid ABC transporter%2C ATP-binding component~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: C1XUM1 ABC-type branched-chain amino acid transport systems%2C ATPase component~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2361 Trad_2362 Trad_2362 Trad_2362 2580708 2581883 - hypothetical protein KEGG: swi:Swit_2495 hypothetical protein~SPTR: A8UK09 Putative hexapeptide transferase family protein gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2362 Trad_2363 Trad_2363 Trad_2363 2582197 2583678 + hypothetical protein KEGG: cag:Cagg_0005 hypothetical protein~SPTR: B8GBL1 Putative uncharacterized protein gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2363 Trad_2364 Trad_2364 Trad_2364 2583727 2584572 + Patatin COGs: COG1752 esterase of the alpha-beta hydrolase superfamily~InterPro IPR016035:IPR002641~KEGG: tth:TTC1004 serine protease~PFAM: Patatin~SPTR: C1XJS1 Predicted esterase of the alpha-beta hydrolase superfamily~PFAM: Patatin-like phospholipase gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2364 Trad_2365 Trad_2365 Trad_2365 2584574 2585755 - kynureninase COGs: COG3844 Kynureninase~InterPro IPR015424:IPR015421:IPR000192:IPR010111~KEGG: dge:Dgeo_1534 kynureninase~PFAM: aminotransferase class V~SPTR: Q1IY55 Kynureninase~TIGRFAM: kynureninase~PFAM: Aminotransferase class-V~TIGRFAM: kynureninase gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2365 Trad_2366 Trad_2366 Trad_2366 2585762 2586367 - Kynurenine formamidase COGs: COG1878 metal-dependent hydrolase~InterPro IPR007325~KEGG: dge:Dgeo_1533 putative cyclase~PFAM: cyclase family protein~PRIAM: Arylformamidase~SPTR: C1XNP8 Predicted metal-dependent hydrolase%2C COG1878~PFAM: Putative cyclase~TIGRFAM: arylformamidase gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2366 Trad_2367 Trad_2367 Trad_2367 2587892 2589238 - phosphoglucosamine mutase COGs: COG1109 Phosphomannomutase~InterProIPR005841:IPR016055:IPR005844:IPR005845:IPR 005846:IPR005843:IPR006352:IPR016066~KEGG: dge:Dgeo_1664 phosphoglucosamine mutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase~SPTR: Q1IXS5 Phosphoglucosamine mutase~TIGRFAM: phosphoglucosamine mutase~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I~TIGRFAM: phosphoglucosamine mutase gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2367 Trad_2368 Trad_2368 Trad_2368 2589316 2591919 - DNA polymerase I COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains~InterProIPR002298:IPR020045:IPR012337:IPR002421:IPR 008918:IPR001098:IPR020046:IPR020047:IPR015361:IPR018320:I PR019760~KEGG: ttj:TTHA1054 DNA polymerase I~PFAM: DNA-directed DNA polymerase%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B 5'-3' exonuclease%2C SAM-fold domain%3B Taq polymerase thermostable exonuclease region~SMART: 5'-3' exonuclease%3B Helix-hairpin-helix domain protein class 2%3B DNA-directed DNA polymerase~SPTR: B6VAJ4 DNA polymerase I~TIGRFAM: DNA polymerase I~PFAM: Taq polymerase%2C exonuclease%3B 5'-3' exonuclease%2C C-terminal SAM fold%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B DNA polymerase family A~TIGRFAM: DNA polymerase I gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2368 Trad_2369 Trad_2369 Trad_2369 2592274 2593758 + carbohydrate kinase%2C YjeF related protein COGs: COG0063 sugar kinase~InterPro IPR004443:IPR000631:IPR017953~KEGG: ank:AnaeK_2365 carbohydrate kinase%2C YjeF related protein~PFAM: YjeF-family domain protein%3B protein of unknown function UPF0031~SPTR: B4UEM1 Carbohydrate kinase%2C YjeF related protein~TIGRFAM: carbohydrate kinase%2C YjeF related protein~PFAM: YjeF-related protein N-terminus%3B Carbohydrate kinase~TIGRFAM: yjeF N-terminal region%3B yjeF C-terminal region%2C hydroxyethylthiazole kinase-related gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2369 Trad_2370 Trad_2370 Trad_2370 2593761 2594708 + homoserine kinase COGs: COG0083 Homoserine kinase~InterProIPR000870:IPR020568:IPR014721:IPR006204:IPR 013750:IPR006203~KEGG: tth:TTC1028 homoserine kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein~SPTR: C1XSK8 Homoserine kinase~TIGRFAM: homoserine kinase~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain~TIGRFAM: homoserine kinase gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2370 Trad_2371 Trad_2371 Trad_2371 2594735 2595232 - conserved hypothetical protein KEGG: nth:Nther_0623 hypothetical protein~SPTR: D1JBN0 Conserved hypothetical membrane protein~PFAM: Putative small multi-drug export protein gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2371 Trad_2372 Trad_2372 Trad_2372 2595557 2596750 - protein of unknown function DUF815 COGs: COG2607 ATPase (AAA+ superfamily)~InterPro IPR008533~KEGG: rxy:Rxyl_0091 hypothetical protein~PFAM: protein of unknown function DUF815~SPTR: Q1AZV7 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF815) gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2372 Trad_2373 Trad_2373 Trad_2373 2596820 2598388 + DNA polymerase III%2C subunits gamma and tau COGs: COG2812 DNA polymerase III gamma/tau subunits~InterPro IPR001270:IPR003593:IPR003959:IPR012763~KEGG: ddr:Deide_01610 putative DNA polymerase III%2C subunits gamma and tau~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~SPTR: C1CYE9 Putative DNA polymerase III%2C subunits gamma and tau~TIGRFAM: DNA polymerase III%2C subunits gamma and tau~PFAM: ATPase family associated with various cellular activities (AAA)~TIGRFAM: DNA polymerase III%2C delta' subunit%3B DNA polymerase III%2C subunits gamma and tau gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2373 Trad_2374 Trad_2374 Trad_2374 2598532 2598939 + hypothetical protein KEGG: hypothetical protein~SPTR: C5E064 ZYRO0G10098p gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2374 Trad_2375 Trad_2375 Trad_2375 2599031 2599351 + conserved hypothetical protein COGs: COG0718 conserved hypothetical protein~InterPro IPR004401~KEGG: sen:SACE_0254 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: C1XW21 Putative uncharacterized protein~PFAM: Uncharacterised BCR%2C YbaB family COG0718~TIGRFAM: conserved hypothetical protein TIGR00103 gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2375 Trad_2376 Trad_2376 Trad_2376 2599425 2600015 + recombination protein RecR COGs: COG0353 Recombinational DNA repair protein (RecF pathway)~InterPro IPR000093:IPR006154:IPR015967:IPR006171~KEGG: dge:Dgeo_1513 recombination protein RecR~PFAM: Zinc finger C4-type%2C RecR%3B TOPRIM domain protein~SMART: Toprim sub domain protein~SPTR: Q1IY76 Recombination protein recR~TIGRFAM: recombination protein RecR~PFAM: Toprim domain%3B RecR protein~TIGRFAM: recombination protein RecR gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2376 Trad_2377 Trad_2377 Trad_2377 2600206 2603145 + DNA topoisomerase I COGs: COG0550 Topoisomerase IA~InterProIPR000380:IPR013324:IPR013824:IPR013826:IPR 011991:IPR006154:IPR003601:IPR003602:IPR006171:IPR013497:I PR005733~KEGG: rmr:Rmar_1704 DNA topoisomerase I~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain protein~PRIAM: DNA topoisomerase~SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain protein~SPTR: D0MJD2 DNA topoisomerase I~TIGRFAM: DNA topoisomerase I~PFAM: Toprim domain%3B DNA topoisomerase~TIGRFAM: DNA topoisomerase I%2C bacterial gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2377 Trad_2378 Trad_2378 Trad_2378 2603142 2603447 + hypothetical protein KEGG: dge:Dgeo_2000 hypothetical protein~SPTR: Q1IWU0 Putative uncharacterized protein gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2378 Trad_2379 Trad_2379 Trad_2379 2603556 2604236 + cell division ATP-binding protein FtsE COGs: COG2884 ATPase involved in cell division~InterPro IPR003593:IPR003439:IPR005286:IPR017871~KEGG: dra:DR_1550 FtsE protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q9RU44 FtsE protein~TIGRFAM: cell division ATP-binding protein FtsE~PFAM: ABC transporter~TIGRFAM: cell division ATP-binding protein FtsE gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2379 Trad_2380 Trad_2380 Trad_2380 2604261 2605469 - peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209:IPR019825~KEGG: nfa:nfa20290 putative protease~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~SPTR: Q5YY66 Putative protease~PFAM: Subtilase family gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2380 Trad_2381 Trad_2381 Trad_2381 2605511 2607583 - hypothetical protein KEGG: Pc22g03720~SPTR: B6HRS8 Pc22g03720 protein~PFAM: Protein of unknown function (DUF3048) gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2381 Trad_2382 Trad_2382 Trad_2382 2607590 2608000 - Biopolymer transport protein ExbD/TolR COGs: COG0848 Biopolymer transport protein~InterPro IPR003400~KEGG: syp:SYNPCC7002_G0136 ExbD-like protein~PFAM: Biopolymer transport protein ExbD/TolR~SPTR: B1XRJ1 ExbD-like protein~PFAM: Biopolymer transport protein ExbD/TolR gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2382 Trad_2383 Trad_2383 Trad_2383 2608026 2608757 - MotA/TolQ/ExbB proton channel COGs: COG0811 Biopolymer transport protein~InterPro IPR002898~KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein~PFAM: MotA/TolQ/ExbB proton channel~SPTR: B8KGU3 MotA/TolQ/ExbB proton channel~PFAM: MotA/TolQ/ExbB proton channel family gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2383 Trad_2384 Trad_2384 Trad_2384 2609060 2611834 - Phosphoenolpyruvate carboxylase COGs: COG2352 Phosphoenolpyruvate carboxylase~InterPro IPR001449:IPR015813:IPR018129~KEGG: ttj:TTHA0626 phosphoenolpyruvate carboxylase~PFAM: phosphoenolpyruvate carboxylase~PRIAM: Phosphoenolpyruvate carboxylase~SPTR: C1XUA7 Phosphoenolpyruvate carboxylase~PFAM: Phosphoenolpyruvate carboxylase gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2384 Trad_2385 Trad_2385 Trad_2385 2612003 2612779 - metallophosphoesterase COGs: COG1692 conserved hypothetical protein~InterPro IPR004843~KEGG: fnu:FN1609 hypothetical protein~PFAM: metallophosphoesterase~SPTR: C1XYU7 Uncharacterized conserved protein%2C COG1692~TIGRFAM: conserved hypothetical protein TIGR00282 gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2385 Trad_2386 Trad_2386 Trad_2386 2612809 2613168 - arsenate reductase-like protein COGs: COG1393 Arsenate reductase and related protein glutaredoxin family~InterPro IPR012336:IPR012335:IPR006660~KEGG: sus:Acid_4980 arsenate reductase related protein~PFAM: arsenate reductase and related~SPTR: Q01WM8 Arsenate reductase related protein~PFAM: ArsC family gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2386 Trad_2387 Trad_2387 Trad_2387 2613406 2615511 + diguanylate cyclase with GAF sensor COGs: COG2199 FOG: GGDEF domain~InterPro IPR003660:IPR003018:IPR000160:IPR007891~KEGG: ddr:Deide_18070 putative diguanylate-cyclase~PFAM: GGDEF domain containing protein%3B CHASE3 domain protein%3B histidine kinase HAMP region domain protein~SMART: GGDEF domain containing protein%3B histidine kinase HAMP region domain protein%3B GAF domain protein~SPTR: C1CX77 Putative diguanylate-cyclase~TIGRFAM: diguanylate cyclase~PFAM: HAMP domain%3B GGDEF domain%3B CHASE3 domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2387 Trad_2388 Trad_2388 Trad_2388 2615565 2616035 + transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~InterProIPR000485:IPR011008:IPR011991:IPR019888:IPR 000835:IPR019887~KEGG: sgr:SGR_6107 AsnC family transcriptional regulator~PFAM: Transcription regulator%2C AsnC-type-like%3B regulatory protein MarR~SMART: Transcription regulator%2C AsnC-type~SPTR: C0U8F2 Transcriptional regulator%2C AsnC family~PFAM: MarR family%3B AsnC family gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2388 Trad_2389 Trad_2389 Trad_2389 2616032 2617195 + acetyltransferase involved in intracellular survival and related acetyltransferase COGs: COG4552 acetyltransferase involved in intracellular survival and related acetyltransferase~InterPro IPR016181:IPR000182~KEGG: sro:Sros_7318 acetyltransferase~SPTR: C4DRY0 Predicted acetyltransferase gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2389 Trad_2390 Trad_2390 Trad_2390 2617473 2618171 - nuclease (SNase domain protein) COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs~InterPro IPR016071:IPR006021:IPR002071~KEGG: sth:STH2345 micrococcal nuclease-like protein~PFAM: nuclease (SNase domain protein)~SMART: nuclease (SNase domain protein)~SPTR: A6MN67 Micrococcal nuclease-like protein~PFAM: Staphylococcal nuclease homologue gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2390 Trad_2391 Trad_2391 Trad_2391 2618388 2619620 + molybdenum cofactor synthesis domain protein COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR005110:IPR001453:IPR005111:IPR020817~KEGG: tth:TTC1894 molybdopterin biosynthesis MoeA protein~PFAM: MoeA domain protein domain I and II%3B molybdopterin binding domain%3B MoeA domain protein domain IV~SPTR: Q72GF4 Molybdopterin biosynthesis moeA protein~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II)%3B MoeA C-terminal region (domain IV)~TIGRFAM: molybdenum cofactor synthesis domain gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2391 Trad_2392 Trad_2392 Trad_2392 2619660 2620226 - ThiJ/PfpI domain protein InterPro IPR002818~KEGG: bgl:bglu_1g11570 DJ-1/PfpI family protein~PFAM: ThiJ/PfpI domain protein~SPTR: C5AE66 DJ-1/PfpI family protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2392 Trad_2393 Trad_2393 Trad_2393 2620308 2620844 + DNA-3-methyladenine glycosylase COGs: COG2094 3-methyladenine DNA glycosylase~InterPro IPR011034:IPR003180~KEGG: mxa:MXAN_6462 DNA-3-methyladenine glycosylase~PFAM: methylpurine-DNA glycosylase (MPG)~PRIAM: DNA-3-methyladenine glycosylase II~SPTR: Q1CYD8 Putative 3-methyladenine DNA glycosylase~TIGRFAM: DNA-3-methyladenine glycosylase~PFAM: Methylpurine-DNA glycosylase (MPG)~TIGRFAM: DNA-3-methyladenine glycosylase (3mg) gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2393 Trad_2394 Trad_2394 Trad_2394 2621329 2622123 + conserved hypothetical protein KEGG: gvi:gll1881 hypothetical protein~SPTR: Q7NJF1 Gll1881 protein~PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2394 Trad_2395 Trad_2395 Trad_2395 2622323 2622943 - flavoprotein WrbA COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR008254:IPR010089~KEGG: dge:Dgeo_1878 flavodoxin/nitric oxide synthase~PFAM: flavodoxin/nitric oxide synthase~SPTR: Q1IX61 Flavodoxin/nitric oxide synthase~TIGRFAM: flavoprotein WrbA~PFAM: NADPH-dependent FMN reductase~TIGRFAM: NAD(P)H:quinone oxidoreductase%2C type IV gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2395 Trad_2396 Trad_2396 Trad_2396 2622973 2623428 - transcriptional regulator%2C MarR family InterPro IPR000835:IPR011991~KEGG: tro:trd_1322 transcriptional regulator%2C MarR family~PFAM: regulatory protein MarR~SMART: regulatory protein MarR~SPTR: B9L1Q9 Transcriptional regulator%2C MarR family~PFAM: MarR family gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2396 Trad_2397 Trad_2397 Trad_2397 2623580 2624500 - cation diffusion facilitator family transporter COGs: COG0053 Co/Zn/Cd cation transporter~InterPro IPR002524~KEGG: ank:AnaeK_1770 cation diffusion facilitator family transporter~PFAM: cation efflux protein~SPTR: B4UMH8 Cation diffusion facilitator family transporter~TIGRFAM: cation diffusion facilitator family transporter~PFAM: Cation efflux family~TIGRFAM: cation diffusion facilitator family transporter gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2397 Trad_2398 Trad_2398 Trad_2398 2624544 2624903 - hypothetical protein KEGG: hmo:HM1_0082 hypothetical protein~SPTR: B0TI34 Putative uncharacterized protein gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2398 Trad_2399 Trad_2399 Trad_2399 2624900 2626111 - peptidase M20 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR011650:IPR002933:IPR001261~KEGG: tro:trd_1045 deacetylase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: B9L041 Deacetylase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: putative selenium metabolism hydrolase gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2399 Trad_2400 Trad_2400 Trad_2400 2626195 2627394 - hypothetical protein InterPro IPR011042:IPR012310~KEGG: cyn:Cyan7425_0297 hemolysin-type calcium-binding region~SPTR: B8HS32 Hemolysin-type calcium-binding region gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2400 Trad_2401 Trad_2401 Trad_2401 2627524 2628729 - hypothetical protein KEGG: cyn:Cyan7425_0297 hemolysin-type calcium-binding region~SPTR: B8HS32 Hemolysin-type calcium-binding region gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2401 Trad_2402 Trad_2402 Trad_2402 2629141 2630181 + diacylglycerol kinase catalytic region COGs: COG1597 Sphingosine kinase~InterPro IPR001206:IPR005218~KEGG: cag:Cagg_1448 diacylglycerol kinase catalytic region~PFAM: diacylglycerol kinase catalytic region~SMART: diacylglycerol kinase catalytic region~SPTR: B8G965 Diacylglycerol kinase catalytic region~PFAM: Diacylglycerol kinase catalytic domain~TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU) gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2402 Trad_2403 Trad_2403 Trad_2403 2630233 2630568 - methylated-DNA/protein-cysteinemethyltransferase COGs: COG3695 methylated DNA-protein cysteine methyltransferase~InterPro IPR014048:IPR011991~KEGG: dra:DR_0428 hypothetical protein~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding~SPTR: Q9RX87 Putative uncharacterized protein~TIGRFAM: methylated-DNA/protein-cysteine methyltransferase~PFAM: 6-O-methylguanine DNA methyltransferase%2C DNA binding domain~TIGRFAM: O-6-methylguanine DNA methyltransferase gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2403 Trad_2404 Trad_2404 Trad_2404 2630668 2631090 + hypothetical protein KEGG: gdj:Gdia_2161 hypothetical protein~SPTR: A9HFS9 Putative uncharacterized protein gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2404 Trad_2405 Trad_2405 Trad_2405 2631491 2632828 + ammonium transporter COGs: COG0004 Ammonia permease~InterPro IPR001905:IPR018047~KEGG: rba:RB5003 high affinity ammonium transporter~PFAM: ammonium transporter~SPTR: A6C9D8 Ammonium transporter~TIGRFAM: ammonium transporter~PFAM: Ammonium Transporter Family~TIGRFAM: ammonium transporter gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2405 Trad_2406 Trad_2406 Trad_2406 2632859 2633212 + nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187:IPR011322:IPR015867:IPR017918~KEGG: dra:DR_0692 nitrogen regulatory protein P-II~PFAM: nitrogen regulatory protein P-II~SPTR: Q9RWH6 Nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein P-II gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2406 Trad_2407 Trad_2407 Trad_2407 2633494 2634828 + RNA modification enzyme%2C MiaB family COGs: COG0621 2-methylthioadenine synthetase~InterProIPR013785:IPR006638:IPR013848:IPR007197:IPR 005839:IPR006463:IPR002792~KEGG: ttj:TTHA1308 hypothetical protein~PFAM: Protein of unknown function UPF0004 %3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: C1XQI6 tRNA-i(6)A37 thiotransferase enzyme MiaB~TIGRFAM: RNA modification enzyme%2C MiaB family%3B tRNA-i(6)A37 thiotransferase enzyme MiaB~PFAM: Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB%3B RNA modification enzyme%2C MiaB family gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2407 Trad_2408 Trad_2408 Trad_2408 2634829 2635293 + NUDIX hydrolase InterPro IPR015797:IPR000086:IPR020084~KEGG: sth:STH496 MutT/NUDIX family protein~PFAM: NUDIX hydrolase~SPTR: Q67S62 MutT/nudix family protein~PFAM: NUDIX domain gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2408 Trad_2409 Trad_2409 Trad_2409 2635290 2637308 - molybdopterin oxidoreductase COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing~InterProIPR009010:IPR006963:IPR006656:IPR006657:IPR 006655~KEGG: ttj:TTHA0200 molybdopterin oxidoreductase~PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~SPTR: B7A8B3 Molybdopterin oxidoreductase~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain%3B Molybdopterin oxidoreductase Fe4S4 domain gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2409 Trad_2410 Trad_2410 Trad_2410 2637484 2637621 + hypothetical protein KEGG: GD24340 gene product from transcript GD24340-RA~SPTR: B4Q4H4 GD24340 gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2410 Trad_2411 Trad_2411 Trad_2411 2637791 2638264 - hypothetical protein KEGG: fba:FIC_00982 2-oxoglutarate dehydrogenase complex%2C dehydrogenase component~SPTR: C6X4U5 2-oxoglutarate dehydrogenase complex%2C dehydrogenase component gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2411 Trad_2412 Trad_2412 Trad_2412 2638571 2638999 - transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: plu:plu4843 IS200 family transposase~PFAM: transposase IS200-family protein~SPTR: Q7M7F4 Transposase%2C IS200 Familly~PFAM: Transposase IS200 like gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2412 Trad_2413 Trad_2413 Trad_2413 2639712 2640704 + aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395~KEGG: sru:SRU_1574 aldo/keto reductase family oxidoreductase~PFAM: aldo/keto reductase~SPTR: Q2S286 Oxidoreductase%2C aldo/keto reductase family~PFAM: Aldo/keto reductase family gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2413 Trad_2414 Trad_2414 Trad_2414 2640707 2641156 + putative transporter KEGG: tfu:Tfu_0059 putative transporter~SPTR: Q47TW7 Putative transporter gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2414 Trad_2415 Trad_2415 Trad_2415 2641170 2641673 - transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~InterProIPR000485:IPR011008:IPR011991:IPR019888:IPR 019887~KEGG: tro:trd_A0750 transcription regulator%2C Lrp/AsnC family~PFAM: Transcription regulator%2C AsnC-type-like~SMART: Transcription regulator%2C AsnC-type~SPTR: B9L4N6 Transcription regulator%2C Lrp/AsnC family~PFAM: AsnC family gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2415 Trad_2416 Trad_2416 Trad_2416 2641834 2643327 + extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: bja:bll2868 ABC transporter substrate-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: A0P1D2 ABC transporter%2C substrate binding protein (Dipeptide)~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2416 Trad_2417 Trad_2417 Trad_2417 2643412 2644362 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: bbr:BB2518 ABC-transport protein%2C inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A9EFG3 Putative substrate-binding transmembrane transmembrane component of ABC transporter~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2417 Trad_2418 Trad_2418 Trad_2418 2644359 2645237 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: bav:BAV1646 ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q2L1I2 ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2418 Trad_2419 Trad_2419 Trad_2419 2645289 2645831 + Chromate transporter COGs: COG2059 Chromate transport protein ChrA~InterPro IPR003370~KEGG: drm:Dred_1337 chromate transporter~PFAM: Chromate transporter~SPTR: A4J468 Chromate transporter~PFAM: Chromate transporter gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2419 Trad_2420 Trad_2420 Trad_2420 2645843 2647429 + Gamma-glutamyltransferase COGs: COG0405 Gamma-glutamyltransferase~InterPro IPR000101~KEGG: aeh:Mlg_0917 gamma-glutamyltransferase 2~PFAM: gamma-glutamyltranspeptidase~PRIAM: Gamma-glutamyltransferase~SPTR: Q1YEZ8 Gamma-glutamyltransferase~PFAM: Gamma-glutamyltranspeptidase~TIGRFAM: gamma-glutamyltranspeptidase gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2420 Trad_2421 Trad_2421 Trad_2421 2647624 2648952 - amino acid permease-associated region COGs: COG1113 Gamma-aminobutyrate permease and related permease~InterPro IPR002293:IPR004841~KEGG: hla:Hlac_2693 amino acid permease-associated region~PFAM: amino acid permease-associated region~SPTR: C0GET0 Amino acid permease-associated region~PFAM: Amino acid permease gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2421 Trad_2422 Trad_2422 Trad_2422 2649192 2649620 + peptidylprolyl isomerase FKBP-type COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2~InterPro IPR001179~KEGG: mem:Memar_1765 peptidylprolyl isomerase%2C FKBP-type~PFAM: peptidylprolyl isomerase FKBP-type~SPTR: B4VHS3 Peptidyl-prolyl cis-trans isomerase~PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2422 Trad_2423 Trad_2423 Trad_2423 2650180 2651037 + hypothetical protein KEGG: sal:Sala_1016 hypothetical protein~SPTR: Q1GUD9 Putative uncharacterized protein gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2423 Trad_2424 Trad_2424 Trad_2424 2651098 2651646 + hypothetical protein KEGG: azo:azo0108 hypothetical protein~SPTR: A1K1M1 Conserved hypothetical secreted protein gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2424 Trad_2425 Trad_2425 Trad_2425 2651686 2652417 + protein of unknown function DUF554 COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump~InterPro IPR007563~KEGG: tth:TTC0522 hypothetical protein~PFAM: protein of unknown function DUF554~SPTR: Q72KC5 Hypothetical membrane spanning protein~PFAM: Protein of unknown function (DUF554) gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2425 Trad_2426 Trad_2426 Trad_2426 2652474 2653295 + hypothetical protein KEGG: FAP55%3B flagellar associated protein~SPTR: C1XVX0 MoxR-like ATPase gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2426 Trad_2427 Trad_2427 Trad_2427 2653364 2654524 + Phenylacetate--CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: tth:TTC0135 coenzyme F390 synthetase/phenylaceate-CoA ligase~PFAM: AMP-dependent synthetase and ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: C1XXR5 Coenzyme F390 synthetase~PFAM: AMP-binding enzyme gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2427 Trad_2428 Trad_2428 Trad_2428 2654546 2655853 + lycopene cyclase family protein COGs: COG0644 Dehydrogenase (flavoprotein)~InterPro IPR003042:IPR008671:IPR010108~KEGG: rrs:RoseRS_2643 lycopene cyclase family protein~PFAM: Lycopene beta and epsilon cyclase~PRIAM: Capsanthin/capsorubin synthase~SPTR: A5UWL4 Lycopene cyclase (CrtL-type)~TIGRFAM: lycopene cyclase family protein~PFAM: Lycopene cyclase protein~TIGRFAM: lycopene cyclase family protein gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2428 Trad_2429 Trad_2429 Trad_2429 2655866 2656855 - Na+/Ca+ antiporter%2C CaCA family COGs: COG0530 Ca2+/Na+ antiporter~InterPro IPR004837:IPR004481~KEGG: sdn:Sden_3438 K+-dependent Na+/Ca+ exchanger related-protein~PFAM: sodium/calcium exchanger membrane region~SPTR: C1XHT8 K+dependent Na+ exchanger related-protein~TIGRFAM: Na+/Ca+ antiporter%2C CaCA family~PFAM: Sodium/calcium exchanger protein~TIGRFAM: calcium/proton exchanger (cax)%3B K+-dependent Na+/Ca+ exchanger related-protein gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2429 Trad_2430 Trad_2430 Trad_2430 2656910 2658130 + major facilitator superfamily MFS_1 COGs: COG2223 Nitrate/nitrite transporter~InterPro IPR016196:IPR011701~KEGG: rca:Rcas_1836 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: A7NKA7 Major facilitator superfamily MFS_1~PFAM: Major Facilitator Superfamily gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2430 Trad_2431 Trad_2431 Trad_2431 2658127 2658810 - Haloacid dehalogenase domain protein hydrolase COGs: COG1011 hydrolase (HAD superfamily)~InterPro IPR005834~KEGG: aba:Acid345_3819 haloacid dehalogenase-like hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: Q1IJY1 Haloacid dehalogenase-like hydrolase~PFAM: haloacid dehalogenase-like hydrolase gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2431 Trad_2432 Trad_2432 Trad_2432 2658905 2659909 - protein of unknown function DUF201 COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)~InterPro IPR003806:IPR011761~KEGG: aba:Acid345_3820 carbamoyl phosphate synthase-like protein~PFAM: protein of unknown function DUF201~SPTR: Q1IJY0 Putative uncharacterized protein~PFAM: ATP-grasp domain gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2432 Trad_2433 Trad_2433 Trad_2433 2660165 2661307 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: mxa:MXAN_2362 glycosyl transferase%2C group 1 family protein~PFAM: glycosyl transferase group 1~SPTR: Q1D9U1 Glycosyl transferase%2C group 1 family protein~PFAM: Glycosyl transferases group 1 gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2433 Trad_2434 Trad_2434 Trad_2434 2661292 2663457 - Haloacid dehalogenase domain protein hydrolase COGs: COG5610 hydrolase (HAD superfamily)~InterPro IPR005834~KEGG: tmz:Tmz1t_3902 hydrolase (HAD superfamily)-like protein~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: C4KD76 Hydrolase (HAD superfamily)-like protein gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2434 Trad_2435 Trad_2435 Trad_2435 2663799 2664590 + extracellular solute-binding protein family 3 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain~InterPro IPR001638:IPR001320:IPR018313~KEGG: sme:SM_b20976 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor~SPTR: B6QX11 Glutamine ABC transporter%2C periplasmic glutamine-binding protein~PFAM: Bacterial extracellular solute-binding proteins%2C family 3 gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2435 Trad_2436 Trad_2436 Trad_2436 2664679 2665932 + polar amino acid ABC transporter%2C inner membrane subunit COGs: COG0765 ABC-type amino acid transport system permease component~InterPro IPR000515:IPR010065~KEGG: sme:SM_b20975 putative amino acid uptake ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B6QX10 Amino acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2436 Trad_2437 Trad_2437 Trad_2437 2666111 2667274 + sodium/hydrogen exchanger COGs: COG0475 Kef-type K+ transport systems membrane components~InterPro IPR006153~KEGG: ttj:TTHA1472 Na(+)/H(+) antiporter~PFAM: sodium/hydrogen exchanger~SPTR: B7RZW5 Transporter%2C CPA2 family~PFAM: Sodium/hydrogen exchanger family gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2437 Trad_2438 Trad_2438 Trad_2438 2667350 2668153 - hypothetical protein KEGG: art:Arth_2341 abortive infection protein~SPTR: A0JXF1 Abortive infection protein gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2438 Trad_2439 Trad_2439 Trad_2439 2668188 2669312 + alanine racemase COGs: COG0787 Alanine racemase~InterProIPR001608:IPR011079:IPR000821:IPR020622:IPR 009006~KEGG: mta:Moth_2167 alanine racemase~PFAM: alanine racemase domain protein~PRIAM: Alanine racemase~SPTR: Q2RGI3 Alanine racemase~TIGRFAM: alanine racemase~PFAM: Alanine racemase%2C C-terminal domain%3B Alanine racemase%2C N-terminal domain~TIGRFAM: alanine racemase gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2439 Trad_2440 Trad_2440 Trad_2440 2669510 2670592 + fatty acid desaturase type 2 InterPro IPR005067:IPR012348:IPR009078~KEGG: dge:Dgeo_0121 fatty acid desaturase%2C type 2~PFAM: fatty acid desaturase type 2~SPTR: Q1J260 Fatty acid desaturase%2C type 2~PFAM: Fatty acid desaturase gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2440 Trad_2441 Trad_2441 Trad_2441 2670876 2672207 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: tpd:Teth39_0613 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q2B462 Sugar ABC transporter substrate-binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2441 Trad_2442 Trad_2442 Trad_2442 2672383 2673351 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: ttr:Tter_0507 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q2B461 Sugar ABC transporter permease~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2442 Trad_2443 Trad_2443 Trad_2443 2673352 2674275 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: ttr:Tter_2216 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: D1CH94 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2443 Trad_2444 Trad_2444 Trad_2444 2674356 2674616 - hypothetical protein KEGG: esa:ESA_02739 hypothetical protein~SPTR: A7MNP6 Putative uncharacterized protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2444 Trad_2445 Trad_2445 Trad_2445 2674714 2675211 + conserved hypothetical protein KEGG: ddr:Deide_21190 hypothetical protein~SPTR: C1CYW3 Putative uncharacterized protein gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2445 Trad_2446 Trad_2446 Trad_2446 2675218 2675724 - hypothetical protein KEGG: dma:DMR_23630 NAD-dependent DNA ligase~SPTR: C4XSN2 NAD-dependent DNA ligase gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2446 Trad_2447 Trad_2447 Trad_2447 2675801 2676877 - response regulator receiver and SARP domain protein COGs: COG3947 Response regulator containing CheY-like receiver and SARP domains~InterPro IPR001789:IPR001867:IPR011006~KEGG: dge:Dgeo_2199 response regulator receiver/SARP domain-containing protein~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: Q1IW91 Response regulator receiver and SARP domain protein~PFAM: Bacterial transcriptional activator domain%3B Response regulator receiver domain gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2447 Trad_2448 Trad_2448 Trad_2448 2677114 2677911 - glycerophosphoryl diester phosphodiesterase COGs: COG0584 Glycerophosphoryl diester phosphodiesterase~InterPro IPR004129:IPR017946~KEGG: ddr:Deide_2p02050 putative glycerophosphodiester phosphodiesterase (glycerophosphoryl diester phosphodiesterase)~PFAM: glycerophosphoryl diester phosphodiesterase~SPTR: C1D385 Putative glycerophosphodiester phosphodiesterase (Glycerophosphoryl diester phosphodiesterase)~PFAM: Glycerophosphoryl diester phosphodiesterase family gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2448 Trad_2449 Trad_2449 Trad_2449 2677917 2678237 - phosphoribosylformylglycinamidine synthase%2C purS COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component~InterPro IPR003850~KEGG: dge:Dgeo_0066 phosphoribosylformylglycinamidine synthetase PurS~PFAM: phosphoribosylformylglycinamidine synthetase PurS~SPTR: Q1J2B5 Phosphoribosylformylglycinamidine synthetase PurS~TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS~PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase~TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2449 Trad_2450 Trad_2450 Trad_2450 2678234 2679031 - phosphoribosylaminoimidazole-succinocarboxamide synthase COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase~InterPro IPR001636:IPR013816:IPR018236~KEGG: dra:DR_0226 phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase~PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase~SPTR: Q9RXT0 Phosphoribosylaminoimidazole-succinocarboxamide synthase~TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase~TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2450 Trad_2451 Trad_2451 Trad_2451 2679037 2679504 - hypothetical protein KEGG: hoh:Hoch_4240 NADH dehydrogenase (quinone)~SPTR: A6GAB6 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3093) gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2451 Trad_2452 Trad_2452 Trad_2452 2679504 2680808 - adenylosuccinate lyase COGs: COG0015 Adenylosuccinate lyase~InterProIPR000362:IPR019468:IPR003031:IPR020557:IPR 008948:IPR004769~KEGG: dge:Dgeo_0688 adenylosuccinate lyase~PFAM: fumarate lyase%3B Adenylosuccinate lyase-like~SPTR: Q1J0J4 Adenylosuccinate lyase~TIGRFAM: adenylosuccinate lyase~PFAM: Lyase%3B Adenylosuccinate lyase C-terminus~TIGRFAM: adenylosuccinate lyase gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2452 Trad_2453 Trad_2453 Trad_2453 2680984 2681211 + prevent-host-death family protein InterPro IPR003756:IPR006442~KEGG: rhi:NGR_b14000 prevent-host-death protein~PFAM: protein of unknown function DUF172~SPTR: C3KRZ3 Prevent-host-death protein~TIGRFAM: prevent-host-death family protein~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2453 Trad_2454 Trad_2454 Trad_2454 2681211 2681603 + PilT protein domain protein COGs: COG3744 conserved hypothetical protein~InterPro IPR002716~KEGG: ttj:TTHA0487 hypothetical protein~PFAM: PilT protein domain protein~SPTR: Q5SL06 Putative uncharacterized protein TTHA0487~PFAM: PIN domain gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2454 Trad_2455 Trad_2455 Trad_2455 2681677 2682822 - metal dependent phosphohydrolase COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain~InterPro IPR003018:IPR006674:IPR003607:IPR006675~KEGG: dge:Dgeo_0220 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain%3B GAF domain protein~SMART: metal-dependent phosphohydrolase HD region~SPTR: Q1J1W1 N-terminal GAF domain and C-terminal HD superfamily hydrolase~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2455 Trad_2456 Trad_2456 Trad_2456 2682912 2683316 - conserved hypothetical protein InterPro IPR013417~KEGG: mes:Meso_0636 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: Q11KN9 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2393)~TIGRFAM: conserved hypothetical protein TIGR02588 gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2456 Trad_2457 Trad_2457 Trad_2457 2683316 2684152 - integral membrane protein TIGR02587 COGs: COG4711 membrane protein~InterPro IPR013416~KEGG: mes:Meso_0637 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: Q11KN8 Putative integral membrane protein TIGR02587~TIGRFAM: integral membrane protein TIGR02587~PFAM: Putative integral membrane protein (DUF2391)~TIGRFAM: putative integral membrane protein TIGR02587 gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2457 Trad_2458 Trad_2458 Trad_2458 2684360 2685244 + protein of unknown function DUF165 InterPro IPR003744~KEGG: dra:DR_0380 hypothetical protein~PFAM: protein of unknown function DUF165~SPTR: Q9RXD4 Putative uncharacterized protein~PFAM: Uncharacterized ACR%2C YhhQ family COG1738~TIGRFAM: conserved hypothetical integral membrane protein gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2458 Trad_2459 Trad_2459 Trad_2459 2685337 2685585 + hypothetical protein KEGG: fal:FRAAL5367 hypothetical protein~SPTR: C0U2H8 Putative uncharacterized protein gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2459 Trad_2460 Trad_2460 Trad_2460 2685589 2685948 + hypothetical protein KEGG: rpf:Rpic12D_2461 ABC transporter related~SPTR: C0U2H9 Putative uncharacterized protein gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2460 Trad_2461 Trad_2461 Trad_2461 2685996 2687102 + peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR000994~KEGG: npu:Npun_F0212 peptidase M24~SPTR: Q08R21 Peptidase%2C M24 family~PFAM: Metallopeptidase family M24 gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2461 Trad_2462 Trad_2462 Trad_2462 2687283 2687462 + pseudogene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2462 Trad_2463 Trad_2463 Trad_2463 2687486 2688310 - protein of unknown function DUF344 COGs: COG2326 conserved hypothetical protein~InterPro IPR005660:IPR016898~KEGG: mgm:Mmc1_0146 hypothetical protein~PFAM: protein of unknown function DUF344~SPTR: A0L3Y0 Putative uncharacterized protein~PFAM: Polyphosphate kinase 2 (PPK2) gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2463 Trad_2464 Trad_2464 Trad_2464 2688366 2689688 - conserved hypothetical protein KEGG: sth:STH2473 hypothetical protein~SPTR: A6FXL7 Putative uncharacterized protein gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2464 Trad_2465 Trad_2465 Trad_2465 2689848 2690810 - hypothetical protein KEGG: mfa:Mfla_1788 hypothetical protein~SPTR: Q1H0D2 UPF0061 protein Mfla_1788 gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2465 Trad_2466 Trad_2466 Trad_2466 2691192 2692208 - extracellular solute-binding protein family 1 COGs: COG0687 Spermidine/putrescine-binding periplasmic protein~InterPro IPR006059:IPR001188~KEGG: pae:PA0203 binding protein component of ABC transporter~PFAM: extracellular solute-binding protein family 1~SPTR: B9NYA2 Spermidine/putrescine ABC transporter%2C spermidine/putrescine-binding protein~PFAM: Bacterial extracellular solute-binding protein gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2466 Trad_2467 Trad_2467 Trad_2467 2692282 2693118 - binding-protein-dependent transport systems inner membrane component COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II~InterPro IPR000515~KEGG: pfl:PFL_5176 ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B9NYA1 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2467 Trad_2468 Trad_2468 Trad_2468 2693115 2694008 - binding-protein-dependent transport systems inner membrane component COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I~InterPro IPR000515~KEGG: pae:PA0205 ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B9NYA0 Polyamine ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2468 Trad_2469 Trad_2469 Trad_2469 2694005 2695141 - spermidine/putrescine ABC transporter ATPase subunit COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterProIPR003439:IPR001889:IPR013611:IPR003593:IPR 017871:IPR008995:IPR005893~KEGG: pap:PSPA7_0289 ABC transporter ATP-binding protein~PFAM: ABC transporter related%3B thymidine kinase%3B Transport-associated OB domain protein~SMART: AAA ATPase~SPTR: A6UY00 Probable ATP-binding component of ABC transporter~TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit~PFAM: ABC transporter%3B TOBE domain~TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2469 Trad_2470 Trad_2470 Trad_2470 2695219 2695896 - hypothetical protein KEGG: predicted protein~SPTR: C0GUV7 Putative uncharacterized protein gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2470 Trad_2471 Trad_2471 Trad_2471 2696190 2696654 - heat shock protein Hsp20 COGs: COG0071 Molecular chaperone (small heat shock protein)~InterPro IPR002068:IPR010916:IPR008978~KEGG: ttj:TTHA1484 hsp 20 family small heat shock protein~PFAM: heat shock protein Hsp20~SPTR: B7ABU5 Heat shock protein Hsp20~PFAM: Hsp20/alpha crystallin family gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2471 Trad_2472 Trad_2472 Trad_2472 2696957 2697877 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: ttj:TTHA0205 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: C1XX57 Integral membrane protein DUF6~PFAM: EamA-like transporter family gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2472 Trad_2473 Trad_2473 Trad_2473 2698076 2698582 + transcriptional regulator%2C CarD family COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD~InterPro IPR003711~KEGG: ttj:TTHA0168 hypothetical protein~PFAM: transcription factor CarD~SPTR: C1XUS3 Transcriptional regulator%2C CarD family~PFAM: CarD-like/TRCF domain gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2473 Trad_2474 Trad_2474 Trad_2474 2698685 2699077 - conserved hypothetical protein KEGG: tai:Taci_0307 hypothetical protein~SPTR: D1B8E1 Putative uncharacterized protein gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2474 Trad_2475 Trad_2475 Trad_2475 2699741 2704321 - DNA-directed RNA polymerase%2C beta' subunit COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit~InterProIPR007080:IPR000722:IPR007066:IPR007083:IPR 007081:IPR006592:IPR018294:IPR011054:IPR012754~KEGG: dge:Dgeo_0635 DNA-directed RNA polymerase%2C subunit beta-prime~PFAM: RNA polymerase Rpb1 domain 1%3B RNA polymerase alpha subunit%3B RNA polymerase Rpb1 domain 3%3B RNA polymerase Rpb1 domain 4%3B RNA polymerase Rpb1 domain 5~SMART: RNA polymerase I subunit A domain protein~SPTR: Q1J0P7 DNA-directed RNA polymerase subunit beta'~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1%2C domain 2%3B RNA polymerase Rpb1%2C domain 4%3B RNA polymerase Rpb1%2C domain 1%3B RNA polymerase Rpb1%2C domain 5%3B RNA polymerase Rpb1%2C domain 3~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit%2C predominant form gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2475 Trad_2476 Trad_2476 Trad_2476 2704331 2707732 - DNA-directed RNA polymerase%2C beta subunit COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit~InterProIPR007644:IPR007642:IPR007645:IPR019462:IPR 007120:IPR007641:IPR013838:IPR007121:IPR010243~KEGG: dge:Dgeo_0636 DNA-directed RNA polymerase subunit beta~PFAM: RNA polymerase Rpb2 domain 6%3B RNA polymerase Rpb2 domain 3%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2 domain 2%3B DNA-directed RNA polymerase%2C beta subunit%2C external 1 domain%3B RNA polymerase Rpb2 domain 7~SPTR: Q1J0P6 DNA-directed RNA polymerase subunit beta~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit~PFAM: RNA polymerase Rpb2%2C domain 3%3B RNA polymerase Rpb2%2C domain 6%3B RNA polymerase beta subunit external 1 domain%3B RNA polymerase Rpb2%2C domain 2%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2%2C domain 7~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2476 Trad_2477 Trad_2477 Trad_2477 2708243 2708626 - ribosomal protein L7/L12 COGs: COG0222 Ribosomal protein L7/L12~InterPro IPR013823:IPR014719:IPR008932:IPR000206~KEGG: dge:Dgeo_0639 50S ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12~SPTR: Q1J0P3 50S ribosomal protein L7/L12~TIGRFAM: ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12 C-terminal domain~TIGRFAM: ribosomal protein L7/L12 gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2477 Trad_2478 Trad_2478 Trad_2478 2708616 2709155 - ribosomal protein L10 COGs: COG0244 Ribosomal protein L10~InterPro IPR001790:IPR002363~KEGG: ttj:TTHA0209 50S ribosomal protein L10~PFAM: ribosomal protein L10~SPTR: B7A8W2 Ribosomal protein L10~PFAM: Ribosomal protein L10 gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2478 Trad_2479 Trad_2479 Trad_2479 2709344 2710027 - ribosomal protein L1 COGs: COG0081 Ribosomal protein L1~InterPro IPR002143:IPR016094:IPR005878~KEGG: ttj:TTHA0246 50S ribosomal protein L1~PFAM: ribosomal protein L1~SPTR: Q5SLP7 50S ribosomal protein L1~TIGRFAM: ribosomal protein L1~PFAM: Ribosomal protein L1p/L10e family~TIGRFAM: ribosomal protein L1%2C bacterial/chloroplast gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2479 Trad_2480 Trad_2480 Trad_2480 2710020 2710457 - ribosomal protein L11 COGs: COG0080 Ribosomal protein L11~InterProIPR020784:IPR020783:IPR000911:IPR020785:IPR 006519~KEGG: dge:Dgeo_0642 50S ribosomal protein L11~PFAM: Ribosomal protein L11-like~SMART: ribosomal protein L11~SPTR: Q1J0P0 50S ribosomal protein L11~TIGRFAM: ribosomal protein L11~PFAM: Ribosomal protein L11%2C RNA binding domain%3B Ribosomal protein L11%2C N-terminal domain~TIGRFAM: 50S ribosomal protein L11 gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2480 Trad_2481 Trad_2481 Trad_2481 2710539 2711087 - NusG antitermination factor COGs: COG0250 Transcription antiterminator~InterProIPR006645:IPR005824:IPR001062:IPR015869:IPR 008991~KEGG: ttj:TTHA0248 transcription antitermination protein NusG~PFAM: NGN domain protein%3B KOW domain protein~SMART: NGN domain protein%3B KOW domain protein~SPTR: C1XLU2 Transcription antitermination protein nusG~TIGRFAM: transcription termination/antitermination factor NusG~PFAM: Transcription termination factor nusG%3B KOW motif~TIGRFAM: transcription termination/antitermination factor NusG gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2481 Trad_2482 Trad_2482 Trad_2482 2711169 2711348 - preprotein translocase%2C SecE subunit InterPro IPR001901:IPR005807~KEGG: dge:Dgeo_0644 preprotein translocase subunit SecE~PFAM: protein secE/sec61-gamma protein~SPTR: Q1J0N8 SecE subunit of protein translocation complex~TIGRFAM: preprotein translocase%2C SecE subunit~PFAM: SecE/Sec61-gamma subunits of protein translocation complex~TIGRFAM: preprotein translocase%2C SecE subunit%2C bacterial gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2482 Trad_2483 Trad_2483 Trad_2483 2711354 2711518 - ribosomal protein L33 InterPro IPR001705:IPR018264~KEGG: ttj:TTHA0250 50S ribosomal protein L33~PFAM: ribosomal protein L33~SPTR: C1XZ54 50S ribosomal protein L33~TIGRFAM: ribosomal protein L33~PFAM: Ribosomal protein L33~TIGRFAM: ribosomal protein L33%2C bacterial type gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2483 Trad_2484 Trad_2484 Trad_2484 2711655 2712872 - translation elongation factor Tu COGs: COG0050 GTPase - translation elongation factors~InterProIPR000795:IPR004161:IPR004160:IPR009001:IPR 009000:IPR004541:IPR005225~KEGG: dra:DR_2050 elongation factor Tu~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain protein~SPTR: Q9R342 Elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: Elongation factor Tu C-terminal domain%3B Elongation factor Tu domain 2%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation elongation factor TU gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2484 Trad_2485 Trad_2485 Trad_2485 2713524 2715275 - PHP domain protein COGs: COG1796 DNA polymerase IV (family X)~InterProIPR004013:IPR002054:IPR003583:IPR003141:IPR 016195:IPR010996~KEGG: dra:DR_0467 hypothetical protein~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein%3B DNA polymerase X%3B Helix-hairpin-helix DNA-binding class 1~SPTR: Q9RX48 Putative uncharacterized protein~PFAM: PHP domain gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2485 Trad_2486 Trad_2486 Trad_2486 2715323 2715874 + hypothetical protein KEGG: sgl:SG2175 hypothetical protein~SPTR: Q2NQX5 Putative uncharacterized protein gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2486 Trad_2487 Trad_2487 Trad_2487 2715942 2716490 + deoxycytidine triphosphate deaminase COGs: COG0717 Deoxycytidine deaminase~InterPro IPR008180:IPR011962~KEGG: ttj:TTHA0130 deoxycytidine triphosphate deaminase~PFAM: deoxyUTP pyrophosphatase~SPTR: C1XZA8 dCTP deaminase~TIGRFAM: deoxycytidine triphosphate deaminase~PFAM: dUTPase~TIGRFAM: deoxycytidine triphosphate deaminase gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2487 Trad_2488 Trad_2488 Trad_2488 2716626 2718065 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR005467:IPR003660:IPR003661:IPR003594:IPR 004358:IPR009082~KEGG: ttj:TTHA1363 sensor histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SPTR: C1XXB2 Sensor protein~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2488 Trad_2489 Trad_2489 Trad_2489 2718127 2718798 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867:IPR011006~KEGG: dge:Dgeo_0195 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: Q1J1Y6 Two component transcriptional regulator%2C winged helix family~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2489 Trad_2490 Trad_2490 Trad_2490 2718914 2719291 - conserved hypothetical protein KEGG: ttj:TTHA1361 hypothetical protein~SPTR: Q72IY5 Putative uncharacterized protein gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2490 Trad_2491 Trad_2491 Trad_2491 2719553 2719930 + hypothetical protein KEGG: mab:MAB_2823c guanylate kinase~SPTR: C1XTL7 Putative uncharacterized protein gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2491 Trad_2492 Trad_2492 Trad_2492 2719952 2722618 - hypothetical protein KEGG: ank:AnaeK_2102 WD40 domain protein beta propeller~SPTR: B4UC98 WD40 domain protein beta Propeller gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2492 Trad_2493 Trad_2493 Trad_2493 2722635 2723771 - glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: gem:GM21_1665 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: C6E5W1 Glycosyl transferase family 2~PFAM: Glycosyl transferase family 2 gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2493 Trad_2494 Trad_2494 Trad_2494 2723833 2724303 - hypothetical protein KEGG: kra:Krad_2468 hypothetical protein~SPTR: C2ERC0 Acid phosphatase gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2494 Trad_2495 Trad_2495 Trad_2495 2724433 2724882 - ABC-type amino acid transport system permease component KEGG: syx:SynWH7803_1415 ABC-type amino acid transport system permease component~SPTR: A4CV67 ABC transporter for amino acids%2C membrane component gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2495 Trad_2496 Trad_2496 Trad_2496 2724879 2725343 - conserved hypothetical protein KEGG: kra:Krad_2468 hypothetical protein~SPTR: A6WAV5 Putative uncharacterized protein gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2496 Trad_2497 Trad_2497 Trad_2497 2725378 2725659 - transcriptional regulator%2C XRE family COGs: COG1476 transcriptional regulator protein~InterPro IPR001387:IPR010982~KEGG: kra:Krad_2467 transcriptional regulator%2C XRE family~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: A6WAV4 Transcriptional regulator%2C XRE family~PFAM: Helix-turn-helix gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2497 Trad_2498 Trad_2498 Trad_2498 2725752 2726657 + tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase~InterPro IPR002501:IPR020103:IPR015947:IPR014780~KEGG: ttj:TTHA0217 tRNA pseudouridine 55 synthase~PFAM: pseudouridylate synthase TruB domain protein~SPTR: Q5SLS6 tRNA pseudouridine synthase B~TIGRFAM: tRNA pseudouridine synthase B~PFAM: TruB family pseudouridylate synthase (N terminal domain)%3B tRNA Pseudouridine synthase II%2C C terminal~TIGRFAM: tRNA pseudouridine 55 synthase gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2498 Trad_2499 Trad_2499 Trad_2499 2726772 2727899 + alanine dehydrogenase COGs: COG0686 Alanine dehydrogenase~InterProIPR007886:IPR007698:IPR016040:IPR008143:IPR 008141~KEGG: ttj:TTHA0216 alanine dehydrogenase~PFAM: alanine dehydrogenase/PNT domain protein~PRIAM: Alanine dehydrogenase~SPTR: Q5SLS7 Alanine dehydrogenase~TIGRFAM: alanine dehydrogenase~PFAM: Alanine dehydrogenase/PNT%2C C-terminal domain%3B Alanine dehydrogenase/PNT%2C N-terminal domain~TIGRFAM: alanine dehydrogenase gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2499 Trad_2500 Trad_2500 Trad_2500 2728040 2729050 - Peptidoglycan-binding domain 1 protein COGs: COG3409 Putative peptidoglycan-binding domain-containing protein~InterPro IPR002477~KEGG: hau:Haur_2153 peptidoglycan binding domain-containing protein~PFAM: Peptidoglycan-binding domain 1 protein~SPTR: A9AWE3 Peptidoglycan-binding domain 1 protein~PFAM: Putative peptidoglycan binding domain gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2500 Trad_2501 Trad_2501 Trad_2501 2729247 2729873 - Holliday junction DNA helicase RuvA COGs: COG0632 Holliday junction resolvasome DNA-binding subunit~InterProIPR013849:IPR011114:IPR003583:IPR012340:IPR 010994:IPR016027:IPR000085~KEGG: ddr:Deide_09360 putative Holliday junction ATP-dependent DNA helicase~PFAM: RuvA domain protein%3B DNA recombination protein RuvA domain I~SPTR: C1D1T9 Putative Holliday junction ATP-dependent DNA helicase~TIGRFAM: Holliday junction DNA helicase RuvA~PFAM: RuvA%2C C-terminal domain%3B RuvA N terminal domain~TIGRFAM: Holliday junction DNA helicase%2C RuvA subunit gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2501 Trad_2502 Trad_2502 Trad_2502 2729980 2732277 + MutS2 family protein COGs: COG1193 Mismatch repair ATPase (MutS family)~InterPro IPR002625:IPR000432:IPR007696:IPR005747~KEGG: dra:DR_1976 DNA mismatch repair protein MutS%2C putative~PFAM: Smr protein/MutS2%3B DNA mismatch repair protein MutS domain protein~SMART: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein%3B Smr protein/MutS2~SPTR: Q9RSZ3 DNA mismatch repair protein MutS%2C putative~TIGRFAM: MutS2 family protein~PFAM: MutS domain V%3B Smr domain~TIGRFAM: MutS2 family protein gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2502 Trad_2503 Trad_2503 Trad_2503 2732328 2733044 - conserved hypothetical protein KEGG: lhk:LHK_02287 hypothetical protein~SPTR: C1DAF6 Putative membrane protein gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2503 Trad_2504 Trad_2504 Trad_2504 2733133 2733561 - thioesterase superfamily protein COGs: COG0824 thioesterase~InterPro IPR006683~KEGG: dge:Dgeo_1535 thioesterase superfamily protein~PFAM: thioesterase superfamily protein~SPTR: C1XRX9 Predicted thioesterase~PFAM: Thioesterase superfamily~TIGRFAM: conserved hypothetical protein TIGR00051 gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2504 Trad_2505 Trad_2505 Trad_2505 2733684 2734325 + conserved hypothetical protein COGs: COG5530 integral membrane protein~InterPro IPR014470~KEGG: ddr:Deide_3p00950 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: C1D3F8 Putative uncharacterized protein~PFAM: Predicted integral membrane protein (DUF2270) gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2505 Trad_2506 Trad_2506 Trad_2506 2734343 2734591 - conserved hypothetical protein KEGG: jan:Jann_2836 hypothetical protein~SPTR: Q28NF9 Putative uncharacterized protein gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2506 Trad_2507 Trad_2507 Trad_2507 2734674 2735378 + conserved hypothetical protein COGs: COG1611 Rossmann fold nucleotide-binding protein~InterPro IPR005269~KEGG: sat:SYN_01766 lysine decarboxylase family protein~PFAM: conserved hypothetical protein~SPTR: Q2LWS8 Lysine decarboxylase family~PFAM: Possible lysine decarboxylase~TIGRFAM: conserved hypothetical protein%2C DprA/Smf-related%2C family 1%3B conserved hypothetical protein%2C DprA/Smf-related%2C family 2 gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2507 Trad_2508 Trad_2508 Trad_2508 2735655 2736287 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032~KEGG: xca:xccb100_3213 two-component system regulatory protein~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~SPTR: Q8PBJ1 Two-component system regulatory protein~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2508 Trad_2509 Trad_2509 Trad_2509 2736294 2737451 - integral membrane sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR011712:IPR003594:IPR018130~KEGG: xcv:XCV1260 two-component system sensor protein~PFAM: histidine kinase dimerisation and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SPTR: Q3BW72 Two-component system sensor protein~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2509 Trad_2510 Trad_2510 Trad_2510 2737574 2738068 + conserved hypothetical protein KEGG: chl:Chy400_0737 hypothetical protein~SPTR: B9LKB0 Putative uncharacterized protein gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2510 Trad_2511 Trad_2511 Trad_2511 2738068 2738769 + conserved hypothetical protein KEGG: aca:ACP_1849 hypothetical protein~SPTR: C1F845 Putative membrane protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2511 Trad_2512 Trad_2512 Trad_2512 2738825 2740222 - peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209~KEGG: sti:Sthe_0138 peptidase S8 and S53 subtilisin kexin sedolisin~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~SPTR: D1C639 Peptidase S8 and S53 subtilisin kexin sedolisin~PFAM: Subtilase family gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2512 Trad_2513 Trad_2513 Trad_2513 2740547 2741544 - pseudogene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2513 Trad_2514 Trad_2514 Trad_2514 2741801 2742286 - hypothetical protein KEGG: avi:Avi_3060 hypothetical protein~SPTR: Q0FYX3 Mu-like prophage protein gp16 gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2514 Trad_2515 Trad_2515 Trad_2515 2742450 2742605 - pseudogene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2515 Trad_2516 Trad_2516 Trad_2516 2742670 2744184 - glycerol kinase COGs: COG0554 Glycerol kinase~InterPro IPR018484:IPR018485:IPR018483:IPR005999~KEGG: cau:Caur_3292 glycerol kinase~PFAM: Carbohydrate kinase%2C FGGY-like~SPTR: A9WJ21 Glycerol kinase~TIGRFAM: glycerol kinase~PFAM: FGGY family of carbohydrate kinases%2C N-terminal domain%3B FGGY family of carbohydrate kinases%2C C-terminal domain~TIGRFAM: glycerol kinase gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2516 Trad_2517 Trad_2517 Trad_2517 2744522 2745712 + Cys/Met metabolism pyridoxal-phosphate-dependent protein COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR000277:IPR015421:IPR015422:IPR015424~KEGG: dge:Dgeo_0011 methionine gamma-lyase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~SPTR: Q1J2G9 Methionine gamma-lyase~PFAM: Cys/Met metabolism PLP-dependent enzyme~TIGRFAM: methionine gamma-lyase gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2517 Trad_2518 Trad_2518 Trad_2518 2746111 2746905 + 5%2C10-methylenetetrahydrofolate reductase-related protein COGs: COG0685 5 10-methylenetetrahydrofolate reductase~KEGG: dge:Dgeo_1337 5%2C10-methylenetetrahydrofolate reductase-related protein~SPTR: Q1IYQ1 5%2C10-methylenetetrahydrofolate reductase-related protein~PFAM: Methylenetetrahydrofolate reductase gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2518 Trad_2519 Trad_2519 Trad_2519 2746902 2750609 + methionine synthase COGs: COG1410 Methionine synthase I cobalamin-binding domain~InterProIPR003726:IPR000489:IPR004223:IPR006158:IPR 003759:IPR011005:IPR011822~KEGG: rmr:Rmar_2433 methionine synthase~PFAM: homocysteine S-methyltransferase%3B dihydropteroate synthase DHPS%3B Methionine synthase B12-binding module cap domain protein%3B cobalamin B12-binding domain protein%3B Vitamin B12 dependent methionine synthase activation region~SPTR: D0MF55 Methionine synthase~TIGRFAM: methionine synthase~PFAM: Pterin binding enzyme%3B Vitamin B12 dependent methionine synthase%2C activation domain%3B B12 binding domain%3B Homocysteine S-methyltransferase~TIGRFAM: methylmalonyl-CoA mutase C-terminal domain%3B 5-methyltetrahydrofolate--homocysteine methyltransferase gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2519 Trad_2520 Trad_2520 Trad_2520 2750599 2751864 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701:IPR001958:IPR016196~KEGG: rca:Rcas_3462 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: A7NPL6 Major facilitator superfamily MFS_1~PFAM: Vacuole effluxer Atg22 like%3B Major Facilitator Superfamily gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2520 Trad_2521 Trad_2521 Trad_2521 2752180 2752344 + indolepyruvate ferredoxin oxidoreductase KEGG: sen:SACE_4073 indolepyruvate ferredoxin oxidoreductase gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2521 Trad_2522 Trad_2522 Trad_2522 2752411 2752710 - conserved hypothetical protein KEGG: maq:Maqu_3330 hypothetical protein~SPTR: A1ZSQ4 YisB gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2522 Trad_2523 Trad_2523 Trad_2523 2752880 2753029 + hypothetical protein gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2523 Trad_2524 Trad_2524 Trad_2524 2753007 2753606 - transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR000792:IPR011991:IPR016032~KEGG: gym:GYMC10_3897 GAF sensor signal transduction histidine kinase~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~SPTR: C1XS12 Histidine kinase with GAF domain~PFAM: Bacterial regulatory proteins%2C luxR family gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2524 Trad_2525 Trad_2525 Trad_2525 2753827 2753991 - hypothetical protein gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2525 Trad_2526 Trad_2526 Trad_2526 2753976 2754221 - hypothetical protein KEGG: fungal specific transcription factor%2C putative~SPTR: B9XB01 Histidine kinase gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2526 Trad_2527 Trad_2527 Trad_2527 2754218 2754604 - conserved hypothetical protein KEGG: btl:BALH_2185 hypothetical protein~SPTR: Q6HIQ4 Putative uncharacterized protein gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2527 Trad_2528 Trad_2528 Trad_2528 2754601 2755695 - Queuosine biosynthesis protein COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)~InterPro IPR003699~KEGG: cai:Caci_5199 queuosine biosynthesis protein~PFAM: Queuosine biosynthesis protein~SPTR: C7Q6M3 Queuosine biosynthesis protein~PFAM: Queuosine biosynthesis protein~TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2528 Trad_2529 Trad_2529 Trad_2529 2755692 2756612 - short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR002198:IPR002347:IPR016040~KEGG: rxy:Rxyl_2616 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B5GYT0 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2529 Trad_2530 Trad_2530 Trad_2530 2757139 2757498 + hypothetical protein KEGG: GF17193 gene product from transcript GF17193-RA~SPTR: B3M0P3 GF17193 gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2530 Trad_2531 Trad_2531 Trad_2531 2757585 2758571 + aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395:IPR020471~KEGG: sus:Acid_4144 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: Q01Z07 Aldo/keto reductase~PFAM: Aldo/keto reductase family gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2531 Trad_2532 Trad_2532 Trad_2532 2758578 2759249 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 COGs: COG1011 hydrolase (HAD superfamily)~InterPro IPR005834:IPR006402:IPR006439~KEGG: rrs:RoseRS_1151 HAD family hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: A5USF5 HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED%3B haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2532 Trad_2533 Trad_2533 Trad_2533 2759445 2759810 + hypothetical protein KEGG: similar to olfactory receptor MOR256-3%3B K04257 olfactory receptor~SPTR: B4S989 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2533 Trad_2534 Trad_2534 Trad_2534 2759932 2761128 + cytochrome P450 COGs: COG2124 Cytochrome P450~InterPro IPR001128:IPR002397:IPR017972~KEGG: sco:SCO3636 cytochrome P-450 hydroxylase~PFAM: cytochrome P450~SPTR: B5HVT3 Cytochrome P450~PFAM: Cytochrome P450 gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2534 Trad_2535 Trad_2535 Trad_2535 2761275 2761595 - hypothetical protein KEGG: hoh:Hoch_4646 protein of unknown function DUF399~SPTR: D0LRA9 Putative uncharacterized protein gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2535 Trad_2536 Trad_2536 Trad_2536 2761762 2762280 + hypothetical protein KEGG: tth:TTC0122 putative cytoplasmic protein~SPTR: Q72LD7 Hypothetical cytosolic protein~PFAM: NADH-quinone oxidoreductase chain 15 gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2536 Trad_2537 Trad_2537 Trad_2537 2762258 2762455 + hypothetical protein KEGG: hoh:Hoch_0380 hypothetical protein~SPTR: A6G8D0 Putative uncharacterized protein gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2537 Trad_2538 Trad_2538 Trad_2538 2762543 2762977 + conserved hypothetical protein KEGG: dra:DR_0488 hypothetical protein~SPTR: Q9RX27 Putative uncharacterized protein gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2538 Trad_2539 Trad_2539 Trad_2539 2762997 2763776 - E3 binding domain protein InterPro IPR004167~KEGG: tth:TTC1530 hypothetical protein~PFAM: E3 binding domain protein~SPTR: C1XNK0 E3 binding domain protein~PFAM: e3 binding domain gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2539 Trad_2540 Trad_2540 Trad_2540 2764207 2766081 + ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR003439:IPR017940:IPR001140:IPR003593:IPR 017871:IPR011527~KEGG: dra:DR_A0349 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: C1XZ98 ABC-type multidrug transport system%2C ATPase and permease component~PFAM: ABC transporter transmembrane region%3B ABC transporter~TIGRFAM: ABC transporter%2C permease/ATP-binding protein gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2540 Trad_2541 Trad_2541 Trad_2541 2766158 2766574 - peroxiredoxin%2C OsmC subfamily COGs: COG1764 redox protein regulator of disulfide bond formation~InterPro IPR003718:IPR015946:IPR019904~KEGG: rmr:Rmar_1364 OsmC family protein~PFAM: OsmC family protein~SPTR: D0MIE5 OsmC family protein~TIGRFAM: peroxiredoxin%2C OsmC subfamily~PFAM: OsmC-like protein~TIGRFAM: peroxiredoxin%2C OsmC subfamily gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2541 Trad_2542 Trad_2542 Trad_2542 2766692 2766946 + hypothetical protein KEGG: nfa:nfa28200 hypothetical protein~SPTR: Q5YVX4 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3072) gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2542 Trad_2543 Trad_2543 Trad_2543 2767028 2769076 + excinuclease ABC%2C B subunit COGs: COG0556 Helicase subunit of the DNA excision repair complex~InterProIPR001943:IPR014021:IPR001650:IPR006935:IPR 014001:IPR009055:IPR004807~KEGG: dge:Dgeo_1890 excinuclease ABC subunit B~PFAM: helicase domain protein%3B type III restriction protein res subunit%3B UvrB/UvrC protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: Q1IX49 UvrABC system protein B~TIGRFAM: excinuclease ABC%2C B subunit~PFAM: Helicase conserved C-terminal domain%3B UvrB/uvrC motif%3B Type III restriction enzyme%2C res subunit%3B Ultra-violet resistance protein B~TIGRFAM: excinuclease ABC%2C B subunit gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2543 Trad_2544 Trad_2544 Trad_2544 2769226 2769945 + hypothetical protein KEGG: fra:Francci3_2811 serine/threonine protein kinase~SPTR: B9Z9F5 Transcriptional regulator%2C XRE family gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2544 Trad_2545 Trad_2545 Trad_2545 2770001 2770498 + transcriptional regulator%2C CarD family COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD~InterPro IPR003711~KEGG: amt:Amet_4508 CarD family transcriptional regulator~PFAM: transcription factor CarD~SPTR: A6TWL2 Transcriptional regulator%2C CarD family~PFAM: CarD-like/TRCF domain gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2545 Trad_2546 Trad_2546 Trad_2546 2770528 2771322 + dimethyladenosine transferase COGs: COG0030 Dimethyladenosine transferase (rRNA methylation)~InterPro IPR001737:IPR020598:IPR020596:IPR011530~KEGG: ttj:TTHA0083 dimethyladenosine transferase~PFAM: ribosomal RNA adenine methylase transferase~SMART: Ribosomal RNA adenine methylase transferase-like~SPTR: Q5SM60 Ribosomal RNA small subunit methyltransferase A~TIGRFAM: dimethyladenosine transferase~PFAM: Ribosomal RNA adenine dimethylase~TIGRFAM: dimethyladenosine transferase gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2546 Trad_2547 Trad_2547 Trad_2547 2771625 2772572 + PfkB domain protein COGs: COG0524 Sugar kinase ribokinase family~InterPro IPR011611:IPR002139~KEGG: dra:DR_1525 carbohydrate kinase~PFAM: PfkB domain protein~SPTR: Q9RU69 Carbohydrate kinase%2C PfkB family~PFAM: pfkB family carbohydrate kinase gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2547 Trad_2548 Trad_2548 Trad_2548 2772621 2773622 + peptidase S41 COGs: COG0793 Periplasmic protease~InterPro IPR005151~KEGG: swi:Swit_4589 peptidase S41~PFAM: peptidase S41~SMART: peptidase S41~SPTR: C1XW49 Periplasmic protease~PFAM: Peptidase family S41 gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2548 Trad_2549 Trad_2549 Trad_2549 2773619 2774467 + beta-lactamase domain protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: aac:Aaci_1889 beta-lactamase domain protein~SPTR: C8WXT9 Beta-lactamase domain protein~PFAM: Metallo-beta-lactamase superfamily gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2549 Trad_2550 Trad_2550 Trad_2550 2774631 2776097 + sodium/hydrogen exchanger COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain~InterPro IPR006037:IPR006153:IPR016040~KEGG: chl:Chy400_0591 sodium/hydrogen exchanger~PFAM: sodium/hydrogen exchanger%3B TrkA-C domain protein~SPTR: B9LJJ6 Sodium/hydrogen exchanger~PFAM: TrkA-C domain%3B Sodium/hydrogen exchanger family gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2550 Trad_2551 Trad_2551 Trad_2551 2776108 2777409 - threonine synthase COGs: COG0498 Threonine synthase~InterPro IPR001926:IPR000634:IPR004450~KEGG: rmr:Rmar_1263 threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~PRIAM: Threonine synthase~SPTR: C1XW42 Threonine synthase~TIGRFAM: threonine synthase~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: threonine synthase gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2551 Trad_2552 Trad_2552 Trad_2552 2777501 2778523 - Homoserine dehydrogenase COGs: COG0460 Homoserine dehydrogenase~InterPro IPR005106:IPR001342:IPR019811:IPR016040~KEGG: ttj:TTHA0489 homoserine dehydrogenase~PFAM: homoserine dehydrogenase%3B homoserine dehydrogenase NAD-binding~PRIAM: Homoserine dehydrogenase~SPTR: C1XW41 Homoserine dehydrogenase~PFAM: Homoserine dehydrogenase%3B Homoserine dehydrogenase%2C NAD binding domain gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2552 Trad_2553 Trad_2553 Trad_2553 2778563 2780014 - SSS sodium solute transporter superfamily COGs: COG4145 Na+/panthothenate symporter~InterPro IPR001734:IPR019900~KEGG: cyb:CYB_0681 solute/sodium symporter (SSS) family protein~PFAM: Na+/solute symporter~SPTR: Q2JHL6 Transporter%2C solute:sodium symporter (SSS) family~TIGRFAM: SSS sodium solute transporter superfamily~PFAM: Sodium:solute symporter family~TIGRFAM: SSS sodium solute transporter superfamily gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2553 Trad_2554 Trad_2554 Trad_2554 2780007 2780219 - hypothetical protein KEGG: cya:CYA_2511 hypothetical protein~SPTR: Q2JRW0 Putative uncharacterized protein gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2554 Trad_2555 Trad_2555 Trad_2555 2780720 2781805 + GTP-binding protein YchF COGs: COG0012 GTPase probable translation factor~InterProIPR002917:IPR013029:IPR006073:IPR012675:IPR 012676:IPR004396~KEGG: dra:DR_1386 GTP-dependent nucleic acid-binding protein EngD~PFAM: Protein of unknown function DUF933%3B GTP-binding protein HSR1-related~SPTR: Q9RUK0 Putative uncharacterized protein~TIGRFAM: GTP-binding protein YchF~PFAM: GTPase of unknown function%3B Protein of unknown function (DUF933)~TIGRFAM: GTP-binding protein YchF gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2555 Trad_2556 Trad_2556 Trad_2556 2782033 2782671 + transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterProIPR000595:IPR012318:IPR001808:IPR014710:IPR 011991:IPR018490~KEGG: dge:Dgeo_1015 CRP/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: regulatory protein Crp~SPTR: Q1IZL9 Transcriptional regulator%2C Crp/Fnr family~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2556 Trad_2557 Trad_2557 Trad_2557 2782753 2783355 - BioY protein COGs: COG1268 conserved hypothetical protein~InterPro IPR003784~KEGG: ttj:TTHA0904 biotin biosynthesis protein BioY~PFAM: BioY protein~SPTR: B7A7G8 BioY protein~PFAM: BioY family gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2557 Trad_2558 Trad_2558 Trad_2558 2783589 2784218 + hypothetical protein KEGG: syf:Synpcc7942_0229 hypothetical protein~SPTR: Q5N2J6 Putative uncharacterized protein gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2558 Trad_2559 Trad_2559 Trad_2559 2784299 2784805 + thioesterase superfamily protein COGs: COG1607 Acyl-CoA hydrolase~InterPro IPR006683~KEGG: cag:Cagg_3174 thioesterase superfamily protein~PFAM: thioesterase superfamily protein~SPTR: B8G7J7 Thioesterase superfamily protein~PFAM: Thioesterase superfamily gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2559 Trad_2560 Trad_2560 Trad_2560 2784901 2786898 + transketolase COGs: COG0021 Transketolase~InterProIPR005474:IPR005475:IPR005476:IPR015941:IPR 009014:IPR005478~KEGG: rmr:Rmar_0472 transketolase~PFAM: Transketolase domain protein%3B Transketolase central region~SPTR: D0MES4 Transketolase~TIGRFAM: transketolase~PFAM: Transketolase%2C thiamine diphosphate binding domain%3B Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain~TIGRFAM: transketolase%2C bacterial and yeast gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2560 Trad_2561 Trad_2561 Trad_2561 2787074 2788867 + hypothetical protein KEGG: atc:AGR_L_1764 hypothetical protein~SPTR: A9CFW3 Ice nucleation-like protein gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2561 Trad_2562 Trad_2562 Trad_2562 2788937 2789554 - dephospho-CoA kinase COGs: COG0237 Dephospho-CoA kinase~InterPro IPR001977~KEGG: dge:Dgeo_0828 dephospho-CoA kinase~PRIAM: Dephospho-CoA kinase~SPTR: Q1J054 Dephospho-CoA kinase~TIGRFAM: dephospho-CoA kinase~PFAM: Dephospho-CoA kinase~TIGRFAM: dephospho-CoA kinase gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2562 Trad_2563 Trad_2563 Trad_2563 2789641 2790954 + polynucleotide adenylyltransferase/metal dependent phosphohydrolase COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase~InterPro IPR002646:IPR006674:IPR003607:IPR006675~KEGG: dge:Dgeo_0612 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain%3B Polynucleotide adenylyltransferase region~SMART: metal-dependent phosphohydrolase HD region~SPTR: Q1J0S0 Metal dependent phosphohydrolase~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain%3B Poly A polymerase head domain~TIGRFAM: uncharacterized domain HDIG gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2563 Trad_2564 Trad_2564 Trad_2564 2790908 2792065 - protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: ote:Oter_3895 hypothetical protein~PFAM: protein of unknown function UPF0118~SPTR: B9XFU0 Putative uncharacterized protein~PFAM: Domain of unknown function DUF20 gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2564 Trad_2565 Trad_2565 Trad_2565 2792209 2793105 + ornithine cyclodeaminase/mu-crystallin COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog~InterPro IPR003462:IPR016040~KEGG: mxa:MXAN_7058 ornithine cyclodeaminase/mu-crystallin family protein~PFAM: ornithine cyclodeaminase/mu-crystallin~SPTR: Q1CWQ2 Ornithine cyclodeaminase/mu-crystallin family protein~PFAM: Ornithine cyclodeaminase/mu-crystallin family gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2565 Trad_2566 Trad_2566 Trad_2566 2793172 2793711 + Abortive infection protein InterPro IPR003675~KEGG: tth:TTC0492 hypothetical protein~PFAM: Abortive infection protein~SPTR: C1XKD3 CAAX amino terminal protease family~PFAM: CAAX amino terminal protease family gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2566 Trad_2567 Trad_2567 Trad_2567 2793751 2794926 - aminotransferase class I and II COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839:IPR015421:IPR015424~KEGG: dra:DR_2268 aminotransferase%2C class I~PFAM: aminotransferase class I and II~SPTR: Q9RS59 Aminotransferase%2C class I~manually curated~PFAM: Aminotransferase class I and II gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2567 Trad_2568 Trad_2568 Trad_2568 2794923 2795237 - hypothetical protein KEGG: ami:Amir_6330 glycosyltransferase-like protein~SPTR: C6WJ56 Glycosyltransferase-like protein gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2568 Trad_2569 Trad_2569 Trad_2569 2795469 2796782 - transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR000792:IPR000160:IPR011991:IPR016032~KEGG: tth:TT_P0172 diguanylate cyclase/phosphodiesterase~PFAM: regulatory protein LuxR%3B GGDEF domain containing protein~SMART: regulatory protein LuxR%3B GGDEF domain containing protein~SPTR: C1XZH6 Diguanylate cyclase (GGDEF) domain-containing protein~PFAM: Bacterial regulatory proteins%2C luxR family gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2569 Trad_2570 Trad_2570 Trad_2570 2796810 2797292 - Carboxymuconolactone decarboxylase InterPro IPR003779~KEGG: tth:TT_P0171 hypothetical protein~PFAM: Carboxymuconolactone decarboxylase~SPTR: Q745Y4 Hypothetical conserved protein~PFAM: Carboxymuconolactone decarboxylase family~TIGRFAM: alkylhydroperoxidase AhpD family core domain gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2570 Trad_2571 Trad_2571 Trad_2571 2797473 2798261 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR002347:IPR016040~KEGG: tgr:Tgr7_2595 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B8GM83 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2571 Trad_2572 Trad_2572 Trad_2572 2798263 2798649 - conserved hypothetical protein KEGG: ddr:Deide_13820 hypothetical protein~SPTR: C1XKE6 Putative uncharacterized protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2572 Trad_2573 Trad_2573 Trad_2573 2798707 2799180 - 6%2C7-dimethyl-8-ribityllumazine synthase COGs: COG0054 Riboflavin synthase beta-chain~InterPro IPR002180~KEGG: bpu:BPUM_2059 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 67-dimethyl-8-ribityllumazine synthase~SPTR: A8FER2 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2573 Trad_2574 Trad_2574 Trad_2574 2799201 2799824 - hypothetical protein KEGG: dge:Dgeo_1098 hypothetical protein~SPTR: Q1IZD8 Putative uncharacterized protein gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2574 Trad_2575 Trad_2575 Trad_2575 2799978 2800958 - UDP-glucose 4-epimerase COGs: COG1087 UDP-glucose 4-epimerase~InterPro IPR001509:IPR016040:IPR005886~KEGG: sru:SRU_1772 UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: Q2S1P2 UDP-glucose 4-epimerase~TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: UDP-glucose-4-epimerase gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2575 Trad_2576 Trad_2576 Trad_2576 2801092 2802054 + branched-chain amino acid aminotransferase COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase~InterPro IPR001544:IPR018483:IPR005785~KEGG: tth:TTC1870 branched-chain amino acid aminotransferase~PFAM: aminotransferase class IV~SPTR: B7ABZ2 Branched-chain amino acid aminotransferase~TIGRFAM: branched-chain amino acid aminotransferase~PFAM: Aminotransferase class IV~TIGRFAM: branched-chain amino acid aminotransferase%2C group I gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2576 Trad_2577 Trad_2577 Trad_2577 2802298 2803074 + 4-hydroxy-2-oxovalerate aldolase COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase~InterPro IPR005000:IPR015813~KEGG: ara:Arad_0101 hydroxyacid aldolase protein~PFAM: HpcH/HpaI aldolase~PRIAM: 4-hydroxy-2-oxovalerate aldolase~SPTR: A8TS74 2-dehydro-3-deoxyglucarate aldolase~PFAM: HpcH/HpaI aldolase/citrate lyase family gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2577 Trad_2578 Trad_2578 Trad_2578 2803108 2803743 + ThiJ/PfpI domain protein COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain~InterPro IPR002818~KEGG: gvi:gll0908 ThiJ/PfpI family protein~PFAM: ThiJ/PfpI domain protein~SPTR: Q7NM60 Gll0908 protein~PFAM: DJ-1/PfpI family gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2578 Trad_2579 Trad_2579 Trad_2579 2803984 2804757 + GCN5-related N-acetyltransferase InterPro IPR000182:IPR016181~KEGG: acr:Acry_1772 ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: C1WSA8 Sortase-like acyltransferase~PFAM: Acetyltransferase (GNAT) family gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2579 Trad_2580 Trad_2580 Trad_2580 2804985 2805149 - hypothetical protein gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2580 Trad_2581 Trad_2581 Trad_2581 2805199 2805345 - hypothetical protein gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2581 Trad_2582 Trad_2582 Trad_2582 2805787 2807241 - prolyl-tRNA synthetase COGs: COG0442 Prolyl-tRNA synthetase~InterProIPR006195:IPR002314:IPR004154:IPR016061:IPR 002316:IPR017449:IPR004499~KEGG: tth:TTC1889 prolyl-tRNA synthetase~PFAM: Anticodon-binding domain protein%3B tRNA synthetase class II (G H P and S)%3B Prolyl-tRNA synthetase%2C class II-like~PRIAM: Proline--tRNA ligase~SPTR: B7A6W6 Prolyl-tRNA synthetase~TIGRFAM: prolyl-tRNA synthetase~PFAM: Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%3B Prolyl-tRNA synthetase%2C C-terminal~TIGRFAM: prolyl-tRNA synthetase%2C family I gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2582 Trad_2583 Trad_2583 Trad_2583 2807546 2807827 - extracellular solute-binding protein family 1 KEGG: pjd:Pjdr2_0961 extracellular solute-binding protein family 1~SPTR: C6CVC6 Extracellular solute-binding protein family 1 gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2583 Trad_2584 Trad_2584 Trad_2584 2808089 2808862 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198:IPR002347:IPR016040~KEGG: rxy:Rxyl_2474 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Q1AT77 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2584 Trad_2585 Trad_2585 Trad_2585 2808859 2810085 + acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR002933:IPR011650:IPR001261:IPR010182~KEGG: rxy:Rxyl_2475 acetylornithine deacetylase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: Q1AT76 Acetylornithine deacetylase~TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2585 Trad_2586 Trad_2586 Trad_2586 2810284 2811762 + extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: jan:Jann_0782 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: D0CTE7 Peptide/opine/nickel uptake family ABC transporter%2C periplasmic substrate-binding protein~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2586 Trad_2587 Trad_2587 Trad_2587 2811778 2812722 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: pde:Pden_0802 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A1B070 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2587 Trad_2588 Trad_2588 Trad_2588 2812754 2813566 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: azc:AZC_2696 peptide ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XGM9 ABC-type dipeptide/oligopeptide/nickel transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2588 Trad_2589 Trad_2589 Trad_2589 2813574 2813918 - hypothetical protein KEGG: kse:Ksed_16260 leucyl/phenylalanyl-tRNA--protein transferase~SPTR: C7NIK3 Leucyl/phenylalanyl-tRNA--protein transferase gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2589 Trad_2590 Trad_2590 Trad_2590 2814080 2815255 + rRNA (guanine-N(2)-)-methyltransferase COGs: COG0116 N6-adenine-specific DNA methylase~InterPro IPR000241:IPR002052~KEGG: pca:Pcar_2256 N6-adenine-specific DNA methylase~PFAM: putative RNA methylase~PRIAM: rRNA (guanine-N(2)-)-methyltransferase~SPTR: Q3A2B2 Predicted N6-adenine-specific DNA methylase~PFAM: Putative RNA methylase family UPF0020 gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2590 Trad_2591 Trad_2591 Trad_2591 2815650 2817767 + RNA binding S1 domain protein COGs: COG0539 Ribosomal protein S1~InterPro IPR003029:IPR000110:IPR012340:IPR016027~KEGG: dge:Dgeo_1577 30S ribosomal protein S1~PFAM: RNA binding S1 domain protein~SPTR: Q1IY12 RNA binding S1~manually curated~PFAM: S1 RNA binding domain~TIGRFAM: ribosomal protein S1 gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2591 Trad_2592 Trad_2592 Trad_2592 2817965 2818510 - LemA family protein COGs: COG1704 conserved hypothetical protein~InterPro IPR007156~KEGG: mac:MA2664 LemA protein~PFAM: LemA family protein~SPTR: C1XI67 Uncharacterized conserved protein~PFAM: LemA family gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2592 Trad_2593 Trad_2593 Trad_2593 2818590 2819708 - tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain~InterPro IPR018318:IPR014729:IPR004506~KEGG: dge:Dgeo_0792 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~PFAM: tRNA methyl transferase-like~SPTR: Q1J090 tRNA-specific 2-thiouridylase mnmA~TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~PFAM: tRNA methyl transferase~TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2593 Trad_2594 Trad_2594 Trad_2594 2819800 2820189 - protein of unknown function DUF1486 InterPro IPR009959~KEGG: tro:trd_A0441 hypothetical protein~PFAM: protein of unknown function DUF1486~SPTR: B9L3S7 Putative uncharacterized protein~PFAM: SnoaL-like polyketide cyclase gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2594 Trad_2595 Trad_2595 Trad_2595 2820387 2821433 - fructose-1%2C6-bisphosphatase%2C class II COGs: COG1494 Fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein~InterPro IPR004464~KEGG: ttj:TTHA1446 fructose 1%2C6-bisphosphatase II~PFAM: GlpX family protein~PRIAM: Fructose-bisphosphatase~SPTR: B7A808 Fructose-1%2C6-bisphosphatase%2C class II~TIGRFAM: fructose-1%2C6-bisphosphatase%2C class II~PFAM: Bacterial fructose-1%2C6-bisphosphatase%2C glpX-encoded~TIGRFAM: fructose-1%2C6-bisphosphatase%2C class II gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2595 Trad_2596 Trad_2596 Trad_2596 2821497 2822159 - phosphoribosyl-ATP diphosphatase COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase~InterPro IPR002496:IPR008179~KEGG: rxy:Rxyl_2116 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase~PFAM: phosphoribosyl-AMP cyclohydrolase%3B phosphoribosyl-ATP pyrophosphohydrolase~SPTR: Q1AU68 Phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase~TIGRFAM: phosphoribosyl-ATP diphosphatase~PFAM: Phosphoribosyl-ATP pyrophosphohydrolase%3B Phosphoribosyl-AMP cyclohydrolase~TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2596 Trad_2597 Trad_2597 Trad_2597 2822281 2823345 + TIM-barrel protein%2C yjbN family COGs: COG0042 tRNA-dihydrouridine synthase~InterPro IPR001269:IPR013785:IPR018517:IPR004653~KEGG: dge:Dgeo_1996 tRNA-dihydrouridine synthase A~PFAM: dihydrouridine synthase DuS~SPTR: Q1IWU4 tRNA-dihydrouridine synthase~TIGRFAM: TIM-barrel protein%2C yjbN family~PFAM: Dihydrouridine synthase (Dus)~TIGRFAM: tRNA dihydrouridine synthase A gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2597 Trad_2598 Trad_2598 Trad_2598 2823360 2823983 + phosphoribosylglycinamide formyltransferase COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN~InterPro IPR002376:IPR001555:IPR004607~KEGG: ttj:TTHA0811 phosphoribosylglycinamide formyltransferase (PurD)~PFAM: formyl transferase domain protein~SPTR: C1XNI1 Phosphoribosylglycinamide formyltransferase~TIGRFAM: phosphoribosylglycinamide formyltransferase~PFAM: Formyl transferase~TIGRFAM: phosphoribosylglycinamide formyltransferase%2C formyltetrahydrofolate-dependent gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2598 Trad_2599 Trad_2599 Trad_2599 2823980 2825236 + phosphoribosylamine/glycine ligase COGs: COG0151 Phosphoribosylamine-glycine ligase~InterProIPR011761:IPR020562:IPR020561:IPR020560:IPR 013817:IPR013815:IPR013816:IPR020559:IPR016185:IPR011054:I PR000115~KEGG: tth:TTC0460 phosphoribosylamine--glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C N-domain%3B Phosphoribosylglycinamide synthetase%2C C-domain~PRIAM: Phosphoribosylamine--glycine ligase~SPTR: Q72KQ8 Phosphoribosylamine-glycine ligase~TIGRFAM: phosphoribosylamine/glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C N domain%3B Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C C domain~TIGRFAM: phosphoribosylamine--glycine ligase gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2599 Trad_2600 Trad_2600 Trad_2600 2825241 2826140 + conserved hypothetical protein KEGG: dge:Dgeo_1600 hypothetical protein~SPTR: Q1IXY9 Predicted phosphosugar isomerase gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2600 Trad_2601 Trad_2601 Trad_2601 2826144 2826860 + conserved hypothetical protein KEGG: dra:DR_1474 hypothetical protein~SPTR: Q9RUB6 Putative uncharacterized protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2601 Trad_2602 Trad_2602 Trad_2602 2827066 2828946 + deoxyxylulose-5-phosphate synthase COGs: COG1154 Deoxyxylulose-5-phosphate synthase~InterProIPR005475:IPR005476:IPR015941:IPR009014:IPR 005477~KEGG: ttj:TTHA0006 1-deoxy-D-xylulose-5-phosphate synthase~PFAM: Transketolase central region%3B Transketolase domain protein~SPTR: Q5SMD7 1-deoxy-D-xylulose-5-phosphate synthase~TIGRFAM: deoxyxylulose-5-phosphate synthase~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain~TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2602 Trad_2603 Trad_2603 Trad_2603 2829225 2830034 + peptidase S16 lon domain protein COGs: COG2802 Uncharacterized protein similar to the N-terminal domain of Lon protease~InterPro IPR003111~KEGG: hap:HAPS_1011 ATP-dependent protease La~PFAM: peptidase S16 lon domain protein~SMART: peptidase S16 lon domain protein~SPTR: C1XFF6 Peptidase S16%2C lon domain protein~PFAM: ATP-dependent protease La (LON) domain gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2603 Trad_2604 Trad_2604 Trad_2604 2830066 2831157 + tRNA pseudouridine synthase D TruD COGs: COG0585 conserved hypothetical protein~InterPro IPR011760:IPR001656:IPR020119:IPR020103~KEGG: dge:Dgeo_0594 pseudouridylate synthase~PFAM: tRNA pseudouridine synthase D TruD~SPTR: Q1J0T8 Pseudouridylate synthase~PFAM: tRNA pseudouridine synthase D (TruD)~TIGRFAM: conserved hypothetical protein TIGR00094 gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2604 Trad_2605 Trad_2605 Trad_2605 2831638 2834046 - von Willebrand factor type A InterPro IPR002035:IPR010768~KEGG: rba:RB7503 putative chloride channel~PFAM: von Willebrand factor type A%3B protein of unknown function DUF1355~SMART: von Willebrand factor type A~SPTR: C1XFI8 Mg-chelatase subunit ChlD~PFAM: von Willebrand factor type A domain%3B Protein of unknown function (DUF1355) gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2605 Trad_2606 Trad_2606 Trad_2606 2834235 2835389 + histidine kinase COGs: COG2205 Osmosensitive K+ channel histidine kinase~InterProIPR005467:IPR003661:IPR003594:IPR004358:IPR 009082~KEGG: dge:Dgeo_0908 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SPTR: Q1IZX4 Sensor protein~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2606 Trad_2607 Trad_2607 Trad_2607 2835481 2836116 + Ribonuclease H COGs: COG0164 Ribonuclease HII~InterPro IPR001352:IPR012337~KEGG: ttj:TTHA0198 ribonuclease HII~PFAM: ribonuclease HII/HIII~PRIAM: Ribonuclease H~SPTR: Q5SLU5 Ribonuclease HII~PFAM: Ribonuclease HII gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2607 Trad_2608 Trad_2608 Trad_2608 2836347 2837174 + PSP1 domain protein COGs: COG1774 Uncharacterized homolog of PSP1~InterPro IPR007557~KEGG: dra:DR_2511 hypothetical protein~PFAM: PSP1 domain protein~SPTR: Q9RRI0 Putative uncharacterized protein~PFAM: PSP1 C-terminal conserved region gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2608 Trad_2609 Trad_2609 Trad_2609 2837226 2838803 + binding-protein-dependent transport systems inner membrane component COGs: COG1178 ABC-type Fe3+ transport system permease component~InterPro IPR000515~KEGG: sgr:SGR_1856 putative ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B5HFL2 ABC transporter integral membrane protein~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2609 Trad_2610 Trad_2610 Trad_2610 2838894 2839685 + hypothetical protein InterPro IPR006311~KEGG: mul:MUL_3414 hypothetical protein~SPTR: A0PTC1 Hypothetical membrane protein gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2610 Trad_2611 Trad_2611 Trad_2611 2840098 2840778 - major intrinsic protein COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family)~InterPro IPR000425~KEGG: dge:Dgeo_1799 major intrinsic protein~PFAM: major intrinsic protein~SPTR: Q1IXE0 Glycerol uptake facilitator GlpF%2C MIP/aquaporin family of transporters~PFAM: Major intrinsic protein gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2611 Trad_2612 Trad_2612 Trad_2612 2840949 2841632 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047:IPR011055~KEGG: ddr:Deide_1p00996 putative peptidase M23~PFAM: Peptidase M23~SPTR: C1XNG1 Metalloendopeptidase-like membrane protein~PFAM: Peptidase family M23 gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2612 Trad_2613 Trad_2613 Trad_2613 2841727 2842515 + beta-lactamase-like protein COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I~KEGG: dge:Dgeo_1586 beta-lactamase-like protein~SPTR: Q1IY03 Beta-lactamase-like protein~PFAM: Metallo-beta-lactamase superfamily gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2613 Trad_2614 Trad_2614 Trad_2614 2842512 2843513 + ABC transporter related protein COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterPro IPR003439:IPR003593:IPR017871~KEGG: dge:Dgeo_1938 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Q1IX02 ABC-type polyamine transport system%2C ATPase component~PFAM: ABC transporter gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2614 Trad_2615 Trad_2615 Trad_2615 2843510 2844133 + thiamine pyrophosphokinase COGs: COG1564 Thiamine pyrophosphokinase~InterPro IPR007371:IPR006282~KEGG: dra:DR_0552 hypothetical protein~PFAM: Thiamin pyrophosphokinase catalytic region~SPTR: C1XSI6 Thiamine pyrophosphokinase~TIGRFAM: thiamine pyrophosphokinase~PFAM: Thiamin pyrophosphokinase%2C vitamin B1 binding domain%3B Thiamin pyrophosphokinase%2C catalytic domain~TIGRFAM: thiamine pyrophosphokinase gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2615 Trad_2616 Trad_2616 Trad_2616 2844765 2845247 - protein of unknown function DUF395%2C YeeE/YedE KEGG: pde:Pden_4145 protein of unknown function DUF395%2C YeeE/YedE~SPTR: A1B9L5 Putative uncharacterized protein gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2616 Trad_2617 Trad_2617 Trad_2617 2845244 2846029 - Xylose isomerase domain protein TIM barrel COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR012307:IPR001719:IPR013022~KEGG: ttj:TTHA1934 hypothetical protein~PFAM: Xylose isomerase domain protein TIM barrel~SMART: AP endonuclease family 2~SPTR: Q5SGZ6 Putative uncharacterized protein TTHA1934~PFAM: Xylose isomerase-like TIM barrel gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2617 Trad_2618 Trad_2618 Trad_2618 2846029 2847225 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: tth:TTC1573 glycerol-3-phosphate-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: C1XMT4 Carbohydrate ABC transporter substrate-binding protein%2C CUT1 family~PFAM: Bacterial extracellular solute-binding protein gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2618 Trad_2619 Trad_2619 Trad_2619 2847263 2848036 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: ttj:TTHA1886 ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B7A8K6 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2619 Trad_2620 Trad_2620 Trad_2620 2848033 2848890 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: tth:TTC1476 transporter~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XY66 Carbohydrate ABC transporter membrane protein 1%2C CUT1 family~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2620 Trad_2621 Trad_2621 Trad_2621 2849611 2850207 + nitrogen-fixing NifU domain protein COGs: COG0694 Thioredoxin-like protein and domains~InterPro IPR001075:IPR000361~KEGG: hch:HCH_02543 thioredoxin-like protein~PFAM: nitrogen-fixing NifU domain protein%3B HesB/YadR/YfhF-family protein~SPTR: Q2Q0I0 Uncharacterized protein with NifU-like and HesB-like domains~PFAM: Iron-sulphur cluster biosynthesis%3B NifU-like domain~TIGRFAM: IscR-regulated protein YhgI%3B Iron-sulfur cluster assembly accessory protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2621 Trad_2622 Trad_2622 Trad_2622 2850426 2851397 + 3-oxoacyl-(acyl-carrier-protein) synthase III COGs: COG0332 3-oxoacyl-(acyl-carrier-protein)~InterProIPR013751:IPR013747:IPR016038:IPR016039:IPR 004655~KEGG: aac:Aaci_0023 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I~SPTR: B7DP87 3-oxoacyl-(Acyl-carrier-protein) synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2622 Trad_2623 Trad_2623 Trad_2623 2851480 2854131 - GCN5-related N-acetyltransferase COGs: COG1042 Acyl-CoA synthetase (NDP forming)~InterProIPR011761:IPR000182:IPR003781:IPR013650:IPR 016181:IPR016040:IPR016102~KEGG: ami:Amir_1469 CoA-binding domain protein~PFAM: GCN5-related N-acetyltransferase%3B CoA-binding domain protein%3B ATP-grasp domain protein~SPTR: C1XWJ3 Acyl-CoA synthetase (NDP forming)~PFAM: Acetyltransferase (GNAT) family gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2623 Trad_2624 Trad_2624 Trad_2624 2854282 2854683 + Carboxymuconolactone decarboxylase COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit~InterPro IPR003779~KEGG: ttj:TTHA1508 gamma-carboxymuconolactone decarboxylase~PFAM: Carboxymuconolactone decarboxylase~SPTR: B7A5D4 Carboxymuconolactone decarboxylase~PFAM: Carboxymuconolactone decarboxylase family gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2624 Trad_2625 Trad_2625 Trad_2625 2854686 2855573 - conserved hypothetical protein KEGG: mxa:MXAN_0342 hypothetical protein~SPTR: Q1DFF7 Putative uncharacterized protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2625 Trad_2626 Trad_2626 Trad_2626 2855838 2857814 + diguanylate cyclase/phosphodiesterase COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterPro IPR001633:IPR000160~KEGG: nmu:Nmul_A0630 diguanylate cyclase/phosphodiesterase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: EAL domain protein%3B GGDEF domain containing protein~SPTR: Q2YBD4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)~TIGRFAM: diguanylate cyclase~PFAM: EAL domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2626 Trad_2627 Trad_2627 Trad_2627 2858263 2858958 - conserved hypothetical protein InterPro IPR013026:IPR011990~KEGG: ttj:TTHA0340 hypothetical protein~SPTR: C1XKN9 Putative uncharacterized protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2627 Trad_2628 Trad_2628 Trad_2628 2859047 2859940 - Silent information regulator protein Sir2 COGs: COG0846 NAD-dependent protein deacetylase SIR2 family~InterPro IPR003000~KEGG: mxa:MXAN_2331 Sir2 family protein~PFAM: Silent information regulator protein Sir2~SPTR: Q1D9X2 Sir2 family protein~PFAM: Sir2 family gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2628 Trad_2629 Trad_2629 Trad_2629 2860273 2861409 + glutamate--cysteine ligase GCS2 COGs: COG2170 conserved hypothetical protein~InterPro IPR006336:IPR011793~KEGG: gau:GAU_1362 carboxylate-amine ligase~PFAM: glutamate--cysteine ligase GCS2~SPTR: C1A844 Carboxylate-amine ligase~PFAM: Glutamate-cysteine ligase family 2(GCS2)~TIGRFAM: uncharacterized enzyme gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2629 Trad_2630 Trad_2630 Trad_2630 2861469 2862374 + alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073:IPR000639~KEGG: rxy:Rxyl_0033 alpha/beta hydrolase fold~PFAM: alpha/beta hydrolase fold~SPTR: Q1B014 Alpha/beta hydrolase fold~PFAM: alpha/beta hydrolase fold gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2630 Trad_2631 Trad_2631 Trad_2631 2862442 2862912 + conserved hypothetical protein KEGG: chl:Chy400_0802 hypothetical protein~SPTR: B9LKH5 Putative uncharacterized protein gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2631 Trad_2632 Trad_2632 Trad_2632 2862967 2863551 - Redoxin domain protein InterPro IPR017936:IPR013740:IPR012335:IPR012336~KEGG: ote:Oter_1318 redoxin domain-containing protein~PFAM: Redoxin domain protein~SPTR: B6EV11 Putative uncharacterized protein~PFAM: Redoxin gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2632 Trad_2633 Trad_2633 Trad_2633 2863802 2863912 - hypothetical protein gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2633 Trad_2634 Trad_2634 Trad_2634 2863975 2865474 + NmrA family protein COGs: COG0702 nucleoside-diphosphate-sugar epimerase~InterPro IPR008030:IPR016040~KEGG: rmr:Rmar_1606 NAD-dependent epimerase/dehydratase~PFAM: NmrA family protein~SPTR: D0MJ34 NAD-dependent epimerase/dehydratase~PFAM: Protein of unknown function (DUF2867)%3B NmrA-like family gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2634 Trad_2635 Trad_2635 Trad_2635 2865471 2866418 - Polyprenyl synthetase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092:IPR008949~KEGG: ttj:TTHA1655 octaprenyl-diphosphate synthase~PFAM: Polyprenyl synthetase~SPTR: Q5SHS5 Octaprenyl-diphosphate synthase~PFAM: Polyprenyl synthetase gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2635 Trad_2636 Trad_2636 Trad_2636 2866515 2868131 - PKD domain containing protein InterPro IPR000601~KEGG: mag:amb3299 RTX toxins and related Ca2+-binding protein~PFAM: PKD domain containing protein~SPTR: A3U2H4 Type I secretion target repeat protein (Fragment)~PFAM: PKD domain gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2636 Trad_2637 Trad_2637 Trad_2637 2868131 2868757 - hypothetical protein KEGG: GE13228 gene product from transcript GE13228-RA~SPTR: B4PAG1 GE13228 gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2637 Trad_2638 Trad_2638 Trad_2638 2869071 2869979 - conserved hypothetical protein KEGG: chl:Chy400_0712 hypothetical protein~SPTR: B9LK85 Putative uncharacterized protein gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2638 Trad_2639 Trad_2639 Trad_2639 2870122 2870778 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: rmr:Rmar_2000 nitroreductase~PFAM: nitroreductase~SPTR: D0MKG9 Nitroreductase~PFAM: Nitroreductase family gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2639 Trad_2640 Trad_2640 Trad_2640 2870797 2871669 - short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR002198:IPR002347:IPR016040~KEGG: rca:Rcas_3678 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: A7NQ81 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2640 Trad_2641 Trad_2641 Trad_2641 2871834 2872139 + hypothetical protein KEGG: paa:Paes_0449 restriction endonuclease~SPTR: Q4S5X4 Chromosome 9 SCAF14729%2C whole genome shotgun sequence. (Fragment) gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2641 Trad_2642 Trad_2642 Trad_2642 2872428 2873846 + hypothetical protein KEGG: hypothetical protein LOC100274003~SPTR: A8UX54 Putative uncharacterized protein gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2642 Trad_2643 Trad_2643 Trad_2643 2873854 2875688 - pseudogene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2643 Trad_2644 Trad_2644 Trad_2644 2875712 2876527 + hypothetical protein KEGG: hypothetical protein~SPTR: B7DQT8 Putative uncharacterized protein gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2644 Trad_2645 Trad_2645 Trad_2645 2876524 2876901 - MazG nucleotide pyrophosphohydrolase InterPro IPR004518:IPR011379~KEGG: pma:Pro0924 MazG family pyrophosphatase~PFAM: MazG nucleotide pyrophosphohydrolase~SPTR: C1XR25 MazG nucleotide pyrophosphohydrolase family protein~PFAM: MazG nucleotide pyrophosphohydrolase domain gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2645 Trad_2646 Trad_2646 Trad_2646 2877039 2878142 + o-succinylbenzoic acid (OSB) synthetase COGs: COG4948 L-alanine-DL-glutamate epimerase~InterPro IPR013341:IPR013342:IPR010197~KEGG: ttj:TTHA0874 N-acylamino acid racemase~PFAM: Mandelate racemase/muconate lactonizing protein~SPTR: C1XT69 O-succinylbenzoate synthase~TIGRFAM: o-succinylbenzoic acid (OSB) synthetase~PFAM: Mandelate racemase / muconate lactonizing enzyme%2C C-terminal domain%3B Mandelate racemase / muconate lactonizing enzyme%2C N-terminal domain~TIGRFAM: o-succinylbenzoic acid (OSB) synthetase gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2646 Trad_2647 Trad_2647 Trad_2647 2878203 2879564 + Platelet-activating factor acetylhydrolase plasma/intracellular isoform II COGs: COG4188 dienelactone hydrolase~InterPro IPR005065~KEGG: dge:Dgeo_1926 dienelactone hydrolase-like protein~PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II~SPTR: Q1IX13 Dienelactone hydrolase-like protein~PFAM: isoform II gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2647 Trad_2648 Trad_2648 Trad_2648 2879810 2880226 + hypothetical protein KEGG: aau:AAur_3210 S-layer domain-containing protein~SPTR: C1XXG3 Putative uncharacterized protein gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2648 Trad_2649 Trad_2649 Trad_2649 2880223 2880840 - flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR002563:IPR012349:IPR009002~KEGG: rrs:RoseRS_2487 hypothetical protein~PFAM: flavin reductase domain protein FMN-binding~SPTR: A5UW61 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein~PFAM: Flavin reductase like domain gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2649 Trad_2650 Trad_2650 Trad_2650 2880818 2881480 - phospholipase/Carboxylesterase COGs: COG0400 esterase~InterPro IPR003140~KEGG: sru:SRU_2742 phospholipase/carboxylesterase~PFAM: phospholipase/Carboxylesterase~SPTR: C6QF61 Phospholipase/Carboxylesterase~PFAM: Phospholipase/Carboxylesterase gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2650 Trad_2651 Trad_2651 Trad_2651 2881480 2882565 - Glyoxalase/bleomycin resistance protein/dioxygenase COGs: COG0346 Lactoylglutathione lyase and related lyase~InterPro IPR004360~KEGG: hau:Haur_2686 glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: A9B146 Glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2651 Trad_2652 Trad_2652 Trad_2652 2882693 2884021 + gid protein COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation~InterPro IPR002218:IPR013027:IPR020595:IPR004417~KEGG: dra:DR_0209 tRNA (uracil-5-)-methyltransferase Gid~PFAM: glucose-inhibited division protein A~PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing)~SPTR: Q9RXU7 Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO~TIGRFAM: gid protein~PFAM: Glucose inhibited division protein A~TIGRFAM: tRNA:m(5)U-54 methyltransferase gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2652 Trad_2653 Trad_2653 Trad_2653 2884112 2884525 + PilT domain-containing protein InterPro IPR000408~KEGG: dau:Daud_2114 PilT domain-containing protein~SPTR: A3YTR9 Putative uncharacterized protein~manually curated~TIGRFAM: conserved hypothetical protein TIGR00305 gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2653 Trad_2654 Trad_2654 Trad_2654 2884653 2885615 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509:IPR008089:IPR016040~KEGG: cag:Cagg_0141 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: B8GCP2 NAD-dependent epimerase/dehydratase~PFAM: NAD dependent epimerase/dehydratase family gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2654 Trad_2655 Trad_2655 Trad_2655 2885617 2885966 + pseudogene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2655 Trad_2656 Trad_2656 Trad_2656 2886084 2886353 - plasmid stabilization system InterPro IPR007712~KEGG: cyt:cce_3160 hypothetical protein~PFAM: plasmid stabilization system~SPTR: B1WXG7 Putative uncharacterized protein~PFAM: Plasmid stabilisation system protein gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2656 Trad_2657 Trad_2657 Trad_2657 2886350 2886547 - conserved hypothetical protein KEGG: cyc:PCC7424_3882 hypothetical protein~SPTR: B4B1J2 Putative uncharacterized protein gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2657 Trad_2658 Trad_2658 Trad_2658 2886596 2887657 - ABC transporter%2C periplasmic binding protein%2C thiB subfamily COGs: COG4143 ABC-type thiamine transport system periplasmic component~InterPro IPR006059:IPR005948~KEGG: ttj:TTHA1808 ABC transporter%2C periplasmic substrate-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q5SHC2 ABC transporter%2C periplasmic substrate-binding protein~TIGRFAM: ABC transporter%2C periplasmic binding protein%2C thiB subfamily~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: ABC transporter periplasmic binding protein%2C thiB subfamily gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2658 Trad_2659 Trad_2659 Trad_2659 2887871 2890546 - surface antigen (D15) COGs: COG4775 Outer membrane protein/protective antigen OMA87~InterPro IPR010827:IPR000184~KEGG: ttj:TTHA0561 outer membrane protein~PFAM: surface antigen (D15)%3B surface antigen variable number repeat protein~SPTR: C1XJV5 Outer membrane protein/protective antigen OMA87~PFAM: Surface antigen variable number repeat%3B Surface antigen gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2659 Trad_2660 Trad_2660 Trad_2660 2890692 2891540 + purine nucleoside phosphorylase I%2C inosine and guanosine-specific COGs: COG0005 Purine nucleoside phosphorylase~InterPro IPR000845:IPR011268:IPR011270~KEGG: tth:TTC0194 purine nucleoside phosphorylase~PFAM: purine or other phosphorylase family 1~SPTR: Q72L69 Purine-nucleoside phosphorylase~TIGRFAM: purine nucleoside phosphorylase I%2C inosine and guanosine-specific%3B inosine guanosine and xanthosine phosphorylase family~PFAM: Phosphorylase superfamily~TIGRFAM: purine nucleoside phosphorylase I%2C inosine and guanosine-specific%3B inosine guanosine and xanthosine phosphorylase family gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2660 Trad_2661 Trad_2661 Trad_2661 2891556 2892269 + alanine racemase domain protein COGs: COG0325 enzyme with a TIM-barrel fold~InterPro IPR001608:IPR011078~KEGG: tth:TTC0195 hypothetical protein~PFAM: alanine racemase domain protein~SPTR: Q72L68 YlmE~PFAM: Alanine racemase%2C N-terminal domain~TIGRFAM: pyridoxal phosphate enzyme%2C YggS family gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2661 Trad_2662 Trad_2662 Trad_2662 2892266 2892742 + DivIVA domain protein InterPro IPR007793:IPR019933~KEGG: tth:TTC0196 hypothetical protein~PFAM: DivIVA family protein~SPTR: Q72L67 Hypothetical conserved protein~TIGRFAM: DivIVA domain~PFAM: DivIVA protein~TIGRFAM: DivIVA domain gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2662 Trad_2663 Trad_2663 Trad_2663 2892813 2893454 - transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterProIPR000595:IPR012318:IPR001808:IPR014710:IPR 011991:IPR018490~KEGG: tth:TT_P0055 regulatory protein~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: regulatory protein Crp%3B cyclic nucleotide-binding~SPTR: B7AAU6 Transcriptional regulator%2C Crp/Fnr family~PFAM: Cyclic nucleotide-binding domain gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2663 Trad_2664 Trad_2664 Trad_2664 2893640 2894536 - regulatory protein MerR COGs: COG5012 cobalamin binding protein~InterPro IPR000551:IPR006158:IPR009061~KEGG: chl:Chy400_2902 regulatory protein MerR~PFAM: regulatory protein MerR%3B cobalamin B12-binding domain protein~SMART: regulatory protein MerR~SPTR: C1XVR4 Transcriptional regulator%2C MerR family~manually curated~PFAM: MerR family regulatory protein%3B B12 binding domain gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2664 Trad_2665 Trad_2665 Trad_2665 2894857 2895339 + Ribonuclease H COGs: COG0328 Ribonuclease HI~InterPro IPR002156:IPR012337~KEGG: rmr:Rmar_1987 ribonuclease H~PFAM: ribonuclease H~PRIAM: Ribonuclease H~SPTR: D0MKF7 Ribonuclease H~PFAM: RNase H gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2665 Trad_2666 Trad_2666 Trad_2666 2895336 2896430 - peptidase M20 COGs: COG2195 Di- and tripeptidase~InterPro IPR002933:IPR011650:IPR001261~KEGG: ddr:Deide_21240 putative peptidase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: C1CYW8 Putative peptidase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2666 Trad_2667 Trad_2667 Trad_2667 2896427 2896672 - hypothetical protein KEGG: mpo:Mpop_0713 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding~SPTR: B1Z708 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2667 Trad_2668 Trad_2668 Trad_2668 2896662 2897345 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR000792:IPR001789:IPR011991:IPR011006~KEGG: ddr:Deide_20700 putative response regulator%2C NarL~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~SPTR: Q1J1L6 Two component transcriptional regulator%2C LuxR family~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2668 Trad_2669 Trad_2669 Trad_2669 2897502 2898806 + Radical SAM domain protein COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)~InterPro IPR007197:IPR004027~KEGG: mac:MA2647 arylsulfatase regulator~PFAM: Radical SAM domain protein%3B SEC-C motif domain protein~SPTR: Q8TML0 Arylsulfatase regulator~PFAM: Radical SAM superfamily%3B SEC-C motif gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2669 Trad_2670 Trad_2670 Trad_2670 2899178 2899651 + double-stranded RNA binding domain protein InterPro IPR001159:IPR014720~KEGG: ddr:Deide_03100 hypothetical protein~PFAM: double-stranded RNA binding domain protein~SMART: double-stranded RNA binding domain protein~SPTR: C1CZ92 Putative uncharacterized protein~PFAM: Double-stranded RNA binding motif gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2670 Trad_2671 Trad_2671 Trad_2671 2899662 2900012 - hypothetical protein KEGG: ubiquitin-conjugating enzyme protein %3B K02207 ubiquitin-conjugating enzyme E2 R~SPTR: A4I7R2 Ubiquitin carrier protein gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2671 Trad_2672 Trad_2672 Trad_2672 2900416 2902986 + sodium/hydrogen exchanger COGs: COG0475 Kef-type K+ transport systems membrane components~InterProIPR002178:IPR006153:IPR006016:IPR014729:IPR 016152~KEGG: bha:BH2844 Na+/H+ antiporter~PFAM: sodium/hydrogen exchanger%3B UspA domain protein%3B phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~SPTR: Q9K908 Na+/H+ antiporter~PFAM: Universal stress protein family%3B Sodium/hydrogen exchanger family%3B Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2672 Trad_2673 Trad_2673 Trad_2673 2903366 2904070 - transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterProIPR000595:IPR012318:IPR001808:IPR014710:IPR 011991:IPR018490~KEGG: dge:Dgeo_0106 Crp/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: cyclic nucleotide-binding%3B regulatory protein Crp~SPTR: Q1J275 Transcriptional regulator%2C Crp/Fnr family~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2673 Trad_2674 Trad_2674 Trad_2674 2904181 2904666 - multisubunit sodium/proton antiporter%2C MrpG subunit (2.A.63.1) COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit~InterPro IPR005133~KEGG: tgr:Tgr7_2522 monovalent cation/proton antiporter%2C MnhG/PhaG subunit~PFAM: Na+/H+ antiporter subunit~SPTR: B9ZLK4 Monovalent cation/proton antiporter%2C MnhG/PhaG subunit~TIGRFAM: monovalent cation/proton antiporter%2C MnhG/PhaG subunit~PFAM: Na+/H+ antiporter subunit~TIGRFAM: monovalent cation/proton antiporter%2C MnhG/PhaG subunit gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2674 Trad_2675 Trad_2675 Trad_2675 2904663 2904947 - multiple resistance and pH regulation protein F COGs: COG2212 Multisubunit Na+/H+ antiporter MnhF subunit~InterPro IPR007208~KEGG: rce:RC1_3669 Na(+)/H(+) antiporter subunit F~PFAM: multiple resistance and pH regulation protein F~SPTR: B6IXJ4 Na(+)/H(+) antiporter subunit F~PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2675 Trad_2676 Trad_2676 Trad_2676 2904944 2905426 - cation antiporter COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit~InterPro IPR002758~KEGG: rce:RC1_3668 Na(+)/H(+) antiporter subunit E~PFAM: cation antiporter~SPTR: B6IXJ3 Na(+)/H(+) antiporter subunit E~PFAM: Na+/H+ ion antiporter subunit gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2676 Trad_2677 Trad_2677 Trad_2677 2905423 2906967 - multisubunit sodium/proton antiporter%2C MrpD subunit (2.A.63.1) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR001750:IPR003918~KEGG: tgr:Tgr7_2525 NADH dehydrogenase (quinone)~PFAM: NADH/Ubiquinone/plastoquinone (complex I)~SPTR: B8GM15 NADH dehydrogenase (Quinone)~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2677 Trad_2678 Trad_2678 Trad_2678 2906964 2907377 - multisubunit sodium/proton antiporter%2C MrpC subunit (2.A.63.1) COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit~InterPro IPR001133~KEGG: jan:Jann_3693 putative monovalent cation/H+ antiporter subunit C~PFAM: NADH-ubiquinone oxidoreductase chain 4L~SPTR: Q28L02 NADH-ubiquinone oxidoreductase chain 4L~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2678 Trad_2679 Trad_2679 Trad_2679 2907377 2907790 - multisubunit sodium/proton antiporter%2C MrpB subunit (2.A.63.1) InterPro IPR007182~KEGG: rrs:RoseRS_2101 putative monovalent cation/H+ antiporter subunit B~PFAM: Na+/H+ antiporter MnhB subunit-related protein~SPTR: A5UV29 Na+/H+ antiporter MnhB subunit-related protein~PFAM: Domain related to MnhB subunit of Na+/H+ antiporter gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2679 Trad_2680 Trad_2680 Trad_2680 2907855 2910182 - multisubunit sodium/proton antiporter%2C MrpA subunit (2.A.63.1) COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit~InterPro IPR001516:IPR001750:IPR003916~KEGG: rce:RC1_3664 Na(+)/H(+) antiporter subunit A~PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein~SPTR: B6IXI9 Na(+)/H(+) antiporter subunit A~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%3B NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2680 Trad_2681 Trad_2681 Trad_2681 2910368 2912914 - Carboxypeptidase Taq COGs: COG2317 Zn-dependent carboxypeptidase~InterProIPR017936:IPR001333:IPR001853:IPR012335:IPR 012336~KEGG: rxy:Rxyl_1098 carboxypeptidase~PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase%3B DSBA oxidoreductase~PRIAM: Carboxypeptidase Taq~SPTR: Q1AX14 Carboxypeptidase Taq. Metallo peptidase. MEROPS family M32~PFAM: Carboxypeptidase Taq (M32) metallopeptidase%3B DSBA-like thioredoxin domain gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2681 Trad_2682 Trad_2682 Trad_2682 2913163 2915028 + Dynamin family protein COGs: COG1159 GTPase~InterPro IPR001401~KEGG: hau:Haur_2968 dynamin family protein~PFAM: Dynamin family protein~SPTR: A9B3N4 Dynamin family protein~PFAM: Dynamin family~TIGRFAM: small GTP-binding protein domain gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2682 Trad_2683 Trad_2683 Trad_2683 2915344 2916165 - hypothetical protein KEGG: sus:Acid_0807 allergen V5/TPX-1 family protein~SPTR: Q02AW0 Allergen V5/Tpx-1 family protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2683 Trad_2684 Trad_2684 Trad_2684 2916437 2917648 - hypothetical protein KEGG: sus:Acid_6160 allergen V5/TPX-1 family protein~SPTR: Q01TD4 Allergen V5/Tpx-1 family protein gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2684 Trad_2685 Trad_2685 Trad_2685 2917979 2918272 - conserved hypothetical protein KEGG: cvi:CV_2785 hypothetical protein~SPTR: Q7NUB5 Putative uncharacterized protein gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2685 Trad_2686 Trad_2686 Trad_2686 2918836 2920539 + pseudogene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2686 Trad_2687 Trad_2687 Trad_2687 2920659 2922299 - alpha amylase catalytic region COGs: COG0296 1 4-alpha-glucan branching enzyme~InterProIPR004193:IPR006047:IPR006048:IPR006589:IPR 013783:IPR013781:IPR017853~KEGG: ana:all0875 hypothetical protein~PFAM: alpha amylase catalytic region%3B glycoside hydrolase family 13 domain protein%3B alpha amylase all-beta~SMART: alpha amylase catalytic sub domain~SPTR: Q44528 All0875 protein~PFAM: Alpha amylase%2C C-terminal all-beta domain%3B Carbohydrate-binding module 48 (Isoamylase N-terminal domain)%3B Alpha amylase%2C catalytic domain gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2687 Trad_2688 Trad_2688 Trad_2688 2922560 2923747 + major facilitator superfamily MFS_1 COGs: COG0738 Fucose permease~InterPro IPR011701:IPR016196~KEGG: hoh:Hoch_1293 major facilitator superfamily MFS_1~PFAM: major facilitator superfamily MFS_1~SPTR: D0LTF6 Major facilitator superfamily MFS_1~PFAM: Major Facilitator Superfamily gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2688 Trad_2689 Trad_2689 Trad_2689 2923887 2924831 + putative esterase COGs: COG2819 hydrolase of the alpha/beta superfamily~InterPro IPR000801~KEGG: fno:Fnod_0083 putative esterase~PFAM: putative esterase~SPTR: Q08UD3 Carbohydrate esterase%2C family 1~PFAM: Putative esterase gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2689 Trad_2690 Trad_2690 Trad_2690 2924828 2925565 + putative esterase COGs: COG4947 conserved hypothetical protein~InterPro IPR000801~KEGG: dat:HRM2_14820 hypothetical protein~PFAM: putative esterase~SPTR: C1WIJ5 Uncharacterized conserved protein~PFAM: Putative esterase gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2690 Trad_2691 Trad_2691 Trad_2691 2925766 2927031 + conserved hypothetical protein KEGG: nml:Namu_3266 hypothetical protein~SPTR: C1WIJ4 Putative uncharacterized protein gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2691 Trad_2692 Trad_2692 Trad_2692 2927264 2928151 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: aoe:Clos_1349 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: A8MH07 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2692 Trad_2693 Trad_2693 Trad_2693 2928160 2929089 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: fnu:FN0397 peptide ABC transporter permease~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: D0BQ68 Nickel ABC transporter%2C permease subunit NikB~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2693 Trad_2694 Trad_2694 Trad_2694 2929220 2930734 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: aoe:Clos_1347 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: A8MH05 Extracellular solute-binding protein family 5~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2694 Trad_2695 Trad_2695 Trad_2695 2931073 2932023 + aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395:IPR005399~KEGG: ttj:TTHA0027 potassium channel%2C beta subunit (oxidoreductase)~PFAM: aldo/keto reductase~SPTR: Q5SMB6 Probable potassium channel%2C beta subunit (Oxidoreductase)~PFAM: Aldo/keto reductase family~TIGRFAM: voltage-dependent potassium channel beta subunit%2C animal gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2695 Trad_2696 Trad_2696 Trad_2696 2932107 2933138 + beta-lactamase domain protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: cpi:Cpin_2292 beta-lactamase domain protein~SPTR: C7PF56 Beta-lactamase domain protein~PFAM: Metallo-beta-lactamase superfamily gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2696 Trad_2697 Trad_2697 Trad_2697 2933434 2936211 - valyl-tRNA synthetase COGs: COG0525 Valyl-tRNA synthetase~InterProIPR002300:IPR013155:IPR019499:IPR019754:IPR 014729:IPR011321:IPR001412:IPR009080:IPR009008:IPR010978:I PR002303~KEGG: dge:Dgeo_1951 valyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ia%3B tRNA synthetase valyl/leucyl anticodon-binding%3B Valyl-tRNA synthetase%2C class Ia%2C tRNA binding arm~SPTR: Q1IWY9 Valyl-tRNA synthetase~TIGRFAM: valyl-tRNA synthetase~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain%3B Valyl tRNA synthetase tRNA binding arm~TIGRFAM: valyl-tRNA synthetase gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2697 Trad_2698 Trad_2698 Trad_2698 2936317 2937099 - Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: hoh:Hoch_4584 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: A1HTU2 Methyltransferase type 11~PFAM: Methyltransferase domain gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2698 Trad_2699 Trad_2699 Trad_2699 2937540 2938166 + HhH-GPD family protein COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase~InterPro IPR003265:IPR011257~KEGG: app:CAP2UW1_2097 HhH-GPD family protein~PFAM: HhH-GPD family protein~SMART: HhH-GPD family protein~SPTR: C1XHZ0 DNA-3-methyladenine glycosylase II~PFAM: HhH-GPD superfamily base excision DNA repair protein gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2699 Trad_2700 Trad_2700 Trad_2700 2938237 2938959 + short-chain dehydrogenase/reductase SDR COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity~InterPro IPR002198:IPR002347:IPR016040~KEGG: dra:DR_1467 short chain dehydrogenase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: A3U9J8 Short chain dehydrogenase~PFAM: short chain dehydrogenase gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2700 Trad_2701 Trad_2701 Trad_2701 2939228 2939656 - transposase IS200-family protein COGs: COG1943 Transposase and inactivated derivatives~InterPro IPR002686~KEGG: plu:plu4843 IS200 family transposase~PFAM: transposase IS200-family protein~SPTR: Q7M7F4 Transposase%2C IS200 Familly~PFAM: Transposase IS200 like gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2701 Trad_2702 Trad_2702 Trad_2702 2939862 2940263 + beta-Ig-H3/fasciclin COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats~InterPro IPR000782~KEGG: npu:Npun_F2532 beta-Ig-H3/fasciclin~PFAM: beta-Ig-H3/fasciclin~SMART: beta-Ig-H3/fasciclin~SPTR: B4B4J9 Beta-Ig-H3/fasciclin~PFAM: Fasciclin domain gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2702 Trad_2703 Trad_2703 Trad_2703 2940373 2941461 + dihydroorotate dehydrogenase COGs: COG0167 Dihydroorotate dehydrogenase~InterPro IPR012135:IPR013785:IPR001295:IPR005719~KEGG: ttj:TTHA0779 dihydroorotate dehydrogenase 2~PFAM: dihydroorotate oxidase~PRIAM: Dihydroorotate oxidase~SPTR: C1XSX7 Dihydroorotate oxidase A~TIGRFAM: dihydroorotate dehydrogenase~PFAM: Dihydroorotate dehydrogenase~TIGRFAM: dihydroorotate dehydrogenase%2C subfamily 2 gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2703 Trad_2704 Trad_2704 Trad_2704 2941534 2942211 + iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR001367:IPR007167:IPR008988~KEGG: sti:Sthe_1384 iron (metal) dependent repressor%2C DtxR family~PFAM: FeoA family protein%3B iron dependent repressor~SMART: iron dependent repressor~SPTR: D1C3K2 Iron (Metal) dependent repressor%2C DtxR family~PFAM: FeoA domain%3B Iron dependent repressor%2C metal binding and dimerisation domain%3B Iron dependent repressor%2C N-terminal DNA binding domain gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2704 Trad_2705 Trad_2705 Trad_2705 2942484 2943953 + UbiA prenyltransferase COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase~InterPro IPR000537~KEGG: mxa:MXAN_6629 hypothetical protein~PFAM: UbiA prenyltransferase~SPTR: B8L0S9 Integral membrane protein~PFAM: UbiA prenyltransferase family gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2705 Trad_2706 Trad_2706 Trad_2706 2943950 2945443 + FAD linked oxidase domain protein COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR016166:IPR006094~KEGG: sti:Sthe_2273 FAD linked oxidase domain protein~PFAM: FAD linked oxidase domain protein~SPTR: D1C6R9 FAD linked oxidase domain protein~PFAM: FAD binding domain gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2706 Trad_2707 Trad_2707 Trad_2707 2945440 2946174 + short-chain dehydrogenase/reductase SDR COGs: COG0300 Short-chain dehydrogenase of various substrate specificities~InterPro IPR002198:IPR002347:IPR016040~KEGG: mxa:MXAN_6631 short chain dehydrogenase/reductase family oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Q1CXX4 Oxidoreductase%2C short-chain dehydrogenase/reductase family~PFAM: short chain dehydrogenase gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2707 Trad_2708 Trad_2708 Trad_2708 2946174 2947115 + conserved hypothetical protein InterPro IPR005242~KEGG: psp:PSPPH_2876 integral membrane protein~PFAM: conserved hypothetical protein~SPTR: Q48HS4 Integral membrane protein~PFAM: Uncharacterised protein family (UPF0104)~TIGRFAM: conserved hypothetical protein gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2708 Trad_2709 Trad_2709 Trad_2709 2947112 2948644 + hypothetical protein KEGG: rxy:Rxyl_0932 hypothetical protein~SPTR: Q1AXH9 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2723) gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2709 Trad_2710 Trad_2710 Trad_2710 2948942 2949331 - hypothetical protein KEGG: hut:Huta_0829 hypothetical protein~SPTR: C1XRD8 Putative uncharacterized protein gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2710 Trad_2711 Trad_2711 Trad_2711 2949519 2952794 + helicase domain protein COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family~InterPro IPR014021:IPR001650:IPR000330:IPR014001~KEGG: ttj:TTHA1020 hypothetical protein~PFAM: helicase domain protein%3B SNF2-related protein~SMART: helicase domain protein%3B DEAD-like helicase~SPTR: Q5SJI8 Putative uncharacterized protein TTHA1020~PFAM: Helicase conserved C-terminal domain%3B SNF2 family N-terminal domain gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2711 Trad_2712 Trad_2712 Trad_2712 2952870 2953106 + prevent-host-death family protein InterPro IPR003756:IPR006442~KEGG: afr:AFE_2983 prevent-host-death family protein~PFAM: protein of unknown function DUF172~SPTR: B7J9V6 Prevent-host-death family protein~TIGRFAM: prevent-host-death family protein~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2712 Trad_2713 Trad_2713 Trad_2713 2953249 2953692 + PilT protein domain protein InterPro IPR002716~KEGG: afr:AFE_2984 PIN domain protein~PFAM: PilT protein domain protein~SPTR: A7C5S7 PilT-like protein~PFAM: PIN domain gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2713 Trad_2714 Trad_2714 Trad_2714 2953689 2956886 + protein of unknown function DUF559 COGs: COG1743 Adenine-specific DNA methylase containing a Zn-ribbon~InterPro IPR009537:IPR007569:IPR002052:IPR011335~KEGG: ttj:TTHA1016 hypothetical protein~PFAM: protein of unknown function DUF559%3B protein of unknown function DUF1156~SPTR: Q5SJJ2 Putative uncharacterized protein TTHA1016~PFAM: Protein of unknown function (DUF559)%3B Protein of unknown function (DUF1156) gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2714 Trad_2715 Trad_2715 Trad_2715 2956951 2957190 + conserved hypothetical protein KEGG: tth:TT_P0192 hypothetical protein~SPTR: B7ABB3 Putative uncharacterized protein gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2715 Trad_2716 Trad_2716 Trad_2716 2957187 2957579 + PilT protein domain protein InterPro IPR002716~KEGG: tth:TT_P0193 hypothetical protein~PFAM: PilT protein domain protein~SPTR: Q745W2 Putative uncharacterized protein~PFAM: PIN domain gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2716 Trad_2717 Trad_2717 Trad_2717 2957587 2960796 + protein of unknown function DUF499 COGs: COG1483 ATPase (AAA+ superfamily)~InterPro IPR007555~KEGG: pth:PTH_0863 ATPase~PFAM: protein of unknown function DUF499~SPTR: A5D401 Predicted ATPase~PFAM: Protein of unknown function (DUF499)~TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2717 Trad_2718 Trad_2718 Trad_2718 2961082 2962236 - peptidase M20 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR002933:IPR011650:IPR017150~KEGG: sti:Sthe_1638 peptidase dimerization domain protein~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: D1C4A5 Peptidase dimerization domain protein~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2718 Trad_2719 Trad_2719 Trad_2719 2962295 2962633 - conserved hypothetical protein KEGG: dra:DR_0040 hypothetical protein~SPTR: Q9RYB0 Putative uncharacterized protein gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2719 Trad_2720 Trad_2720 Trad_2720 2962727 2964118 - major facilitator superfamily MFS_1 COGs: COG2211 Na+/melibiose symporter and related transporter~InterPro IPR011701:IPR016196~KEGG: gvi:gll4250 sugar transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Q7NDI5 Gll4250 protein~PFAM: Major Facilitator Superfamily gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2720 Trad_2721 Trad_2721 Trad_2721 2964192 2965562 + polysaccharide biosynthesis protein COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid~InterPro IPR002797~KEGG: mar:MAE_32920 polysaccharide biosynthesis protein~PFAM: polysaccharide biosynthesis protein~SPTR: A0YL48 Putative uncharacterized protein~PFAM: Polysaccharide biosynthesis protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2721 Trad_2722 Trad_2722 Trad_2722 2965899 2966735 + sulfotransferase InterPro IPR000863~KEGG: pde:Pden_2009 sulfotransferase~PFAM: sulfotransferase~SPTR: B7RS29 Sulfotransferase~PFAM: Sulfotransferase domain gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2722 Trad_2723 Trad_2723 Trad_2723 2966835 2967836 + sulfotransferase InterPro IPR000863~KEGG: hoh:Hoch_6521 sulfotransferase domain protein~PFAM: sulfotransferase~SPTR: Q1PUH3 Similar to sulfotransferase~PFAM: Sulfotransferase domain gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2723 Trad_2724 Trad_2724 Trad_2724 2967833 2968690 + sulfotransferase InterPro IPR000863~KEGG: hoh:Hoch_6521 sulfotransferase domain protein~PFAM: sulfotransferase~SPTR: Q1PUH3 Similar to sulfotransferase~PFAM: Sulfotransferase domain gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2724 Trad_2725 Trad_2725 Trad_2725 2968746 2969828 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: gur:Gura_3220 glycosyl transferase%2C group 1~PFAM: glycosyl transferase group 1~SPTR: C6NU24 Glycosyltransferase~PFAM: Glycosyl transferases group 1 gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2725 Trad_2726 Trad_2726 Trad_2726 2969869 2969988 + conserved hypothetical protein KEGG: mpt:Mpe_A3025 hypothetical protein~SPTR: A2SK89 Putative uncharacterized protein gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2726 Trad_2727 Trad_2727 Trad_2727 2970215 2970856 - CoA-binding domain protein COGs: COG2344 AT-rich DNA-binding protein~InterPro IPR009718:IPR003781:IPR011991:IPR016040~KEGG: ttj:TTHA1657 redox-sensing transcriptional repressor REX~PFAM: CoA-binding domain protein%3B Rex DNA-binding domain protein~SPTR: Q5SHS3 Redox-sensing transcriptional repressor rex~PFAM: CoA binding domain%3B Putative DNA-binding protein N-terminus gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2727 Trad_2728 Trad_2728 Trad_2728 2970869 2972164 - Sporulation domain protein InterPro IPR007730~KEGG: hypothetical protein~PFAM: Sporulation domain protein~SPTR: C3XQ26 Putative uncharacterized protein~PFAM: Sporulation related domain gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2728 Trad_2729 Trad_2729 Trad_2729 2972424 2974100 - Tetratricopeptide TPR_2 repeat protein InterProIPR019734:IPR013026:IPR001440:IPR013105:IPR 011717:IPR011990~KEGG: dra:DR_0937 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein%3B Tetratricopeptide TPR_4~SPTR: C1XUS0 Tfp pilus assembly protein PilF~PFAM: Tetratricopeptide repeat gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2729 Trad_2730 Trad_2730 Trad_2730 2974152 2975201 - radical SAM enzyme%2C Cfr family COGs: COG0820 Fe-S-cluster redox enzyme~InterPro IPR007197:IPR004383~KEGG: dge:Dgeo_0633 hypothetical protein~PFAM: Radical SAM domain protein~SPTR: Q1J0P9 Ribosomal RNA large subunit methyltransferase N~TIGRFAM: radical SAM enzyme%2C Cfr family~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM enzyme%2C Cfr family gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2730 Trad_2731 Trad_2731 Trad_2731 2975210 2975722 - conserved hypothetical protein KEGG: dge:Dgeo_0937 hypothetical protein~SPTR: Q1IZU6 Putative uncharacterized protein gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2731 Trad_2732 Trad_2732 Trad_2732 2975933 2977192 + glucose-1-phosphate adenylyltransferase COGs: COG0448 ADP-glucose pyrophosphorylase~InterPro IPR005835:IPR005836:IPR011004:IPR011831~KEGG: ttj:TTHA0022 glucose-1-phosphate adenylyltransferase~PFAM: Nucleotidyl transferase~SPTR: Q5SMC1 Glucose-1-phosphate adenylyltransferase~TIGRFAM: glucose-1-phosphate adenylyltransferase~PFAM: Nucleotidyl transferase~TIGRFAM: glucose-1-phosphate adenylyltransferase gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2732 Trad_2733 Trad_2733 Trad_2733 2977893 2979890 + ATP-dependent metalloprotease FtsH COGs: COG0465 ATP-dependent Zn protease~InterProIPR011546:IPR003959:IPR000642:IPR003593:IPR 003960:IPR005936~KEGG: tth:TTC0035 cell division protein FtsH~PFAM: AAA ATPase central domain protein%3B peptidase M41 FtsH extracellular%3B peptidase M41~PRIAM: Microtubule-severing ATPase~SMART: AAA ATPase~SPTR: C1XWE2 Membrane protease FtsH catalytic subunit~TIGRFAM: ATP-dependent metalloprotease FtsH~PFAM: FtsH Extracellular%3B Peptidase family M41%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent metalloprotease FtsH gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2733 Trad_2734 Trad_2734 Trad_2734 2980264 2981973 + PASTA domain containing protein COGs: COG2815 conserved hypothetical protein~InterPro IPR005543:IPR002345~KEGG: dge:Dgeo_1953 PASTA domain-containing protein~PFAM: PASTA domain containing protein~SMART: PASTA domain containing protein~SPTR: C1XR44 Uncharacterized conserved protein~PFAM: PASTA domain gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2734 Trad_2735 Trad_2735 Trad_2735 2982154 2982498 + histidine triad (HIT) protein COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase~InterPro IPR001310:IPR011151:IPR019808:IPR011146~KEGG: dge:Dgeo_1329 histidine triad (HIT) protein~PFAM: histidine triad (HIT) protein~SPTR: Q1IYQ9 Histidine triad (HIT) protein~PFAM: HIT domain gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2735 Trad_2736 Trad_2736 Trad_2736 2982710 2983876 + Histidine--tRNA ligase COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis~InterPro IPR006195:IPR002314:IPR004516~KEGG: ttj:TTHA0129 ATP phosphoribosyltransferase regulatory subunit~PFAM: tRNA synthetase class II (G H P and S)~PRIAM: Histidine--tRNA ligase~SPTR: C1XGI8 ATP phosphoribosyltransferase regulatory subunit gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2736 Trad_2737 Trad_2737 Trad_2737 2983869 2984495 + ATP phosphoribosyltransferase COGs: COG0040 ATP phosphoribosyltransferase~InterPro IPR013820:IPR018198~KEGG: dra:DR_1445 ATP phosphoribosyltransferase catalytic subunit~PFAM: ATP phosphoribosyltransferase catalytic region~PRIAM: ATP phosphoribosyltransferase~SPTR: Q9RUE2 ATP phosphoribosyltransferase~TIGRFAM: ATP phosphoribosyltransferase~PFAM: ATP phosphoribosyltransferase~TIGRFAM: ATP phosphoribosyltransferase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2737 Trad_2738 Trad_2738 Trad_2738 2984632 2984934 - hypothetical protein KEGG: Glycine-rich cell wall structural protein 1 precursor%2C putative~SPTR: A8NI02 Glycine-rich cell wall structural protein 1%2C putative gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2738 Trad_2739 Trad_2739 Trad_2739 2985312 2986628 + acetyl-CoA acetyltransferase COGs: COG0183 Acetyl-CoA acetyltransferase~InterPro IPR016038:IPR000408:IPR016039:IPR002155~KEGG: rxy:Rxyl_2454 3-ketoacyl-CoA thiolase~PRIAM: Acetyl-CoA C-acyltransferase~SPTR: Q1AT97 3-ketoacyl-CoA thiolase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase%2C C-terminal domain%3B Thiolase%2C N-terminal domain~TIGRFAM: acetyl-CoA acetyltransferases gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2739 Trad_2740 Trad_2740 Trad_2740 2986628 2988784 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase~InterProIPR001753:IPR006176:IPR006108:IPR016040:IPR 013328:IPR018376:IPR008927~KEGG: rxy:Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase~PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~SPTR: Q1AT98 Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase~PFAM: Enoyl-CoA hydratase/isomerase family%3B 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%3B 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2740 Trad_2741 Trad_2741 Trad_2741 2988875 2989636 - tRNA/rRNA methyltransferase (SpoU) COGs: COG0566 rRNA methylase~InterPro IPR001537~KEGG: cpy:Cphy_2422 tRNA/rRNA methyltransferase (SpoU)~PFAM: tRNA/rRNA methyltransferase (SpoU)~SPTR: B1C556 Putative uncharacterized protein~PFAM: SpoU rRNA Methylase family gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2741 Trad_2742 Trad_2742 Trad_2742 2989627 2990670 - conserved hypothetical protein KEGG: ttj:TTHA0315 hypothetical protein~SPTR: B7A9D3 Putative uncharacterized protein gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2742 Trad_2743 Trad_2743 Trad_2743 2991079 2991681 + hypothetical protein KEGG: rce:RC1_0498 hypothetical protein~SPTR: A3SKH8 Putative uncharacterized protein gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2743 Trad_2744 Trad_2744 Trad_2744 2991678 2992016 + conserved hypothetical protein KEGG: noc:Noc_1592 hypothetical protein~SPTR: Q3JAS5 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3618) gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2744 Trad_2745 Trad_2745 Trad_2745 2992190 2992597 + conserved hypothetical protein KEGG: noc:Noc_1592 hypothetical protein~SPTR: Q3JAS5 Putative uncharacterized protein gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2745 Trad_2746 Trad_2746 Trad_2746 2992674 2993576 + conserved hypothetical protein KEGG: mei:Msip34_1276 hypothetical protein~SPTR: A4BVC3 Putative uncharacterized protein gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2746 Trad_2747 Trad_2747 Trad_2747 2993590 2993751 + protein of unknown function UPF0057 InterPro IPR000612~KEGG: rxy:Rxyl_0694 hypothetical protein~PFAM: protein of unknown function UPF0057~SPTR: Q1AY64 Putative uncharacterized protein~PFAM: Uncharacterized protein family UPF0057 gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2747 Trad_2748 Trad_2748 Trad_2748 2994021 2994968 + Ion transport 2 domain protein InterPro IPR013099~KEGG: noc:Noc_2962 hypothetical protein~PFAM: Ion transport 2 domain protein~SPTR: A0YVZ0 Putative uncharacterized protein~PFAM: Ion channel gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2748 Trad_2749 Trad_2749 Trad_2749 2994973 2995832 + Transposase-like protein COGs: COG3293 Transposase and inactivated derivatives~KEGG: dge:Dgeo_2686 putative IS1648 transposase~SPTR: Q1J315 Putative IS1648 transposase~manually curated~PFAM: Transposase DDE domain gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2749 Trad_2750 Trad_2750 Trad_2750 2996256 2997257 + amine oxidase COGs: COG3380 NAD/FAD-dependent oxidoreductase~InterPro IPR000759:IPR002937~KEGG: gvi:glr2878 hypothetical protein~PFAM: amine oxidase~SPTR: Q7NCU8 Glr2878 protein~PFAM: Flavin containing amine oxidoreductase gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2750 Trad_2751 Trad_2751 Trad_2751 2997327 2998367 + sulfotransferase InterPro IPR000863~KEGG: cyc:PCC7424_0327 sulfotransferase~PFAM: sulfotransferase~SPTR: B7KBX2 Sulfotransferase~PFAM: Sulfotransferase domain gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2751 Trad_2752 Trad_2752 Trad_2752 2998560 3001424 + excinuclease ABC%2C A subunit COGs: COG0178 Excinuclease ATPase subunit~InterPro IPR017871:IPR004602:IPR003593:IPR003439~KEGG: ttj:TTHA1440 excinuclease ABC subunit A~PFAM: ABC transporter related~SPTR: Q56242 UvrABC system protein A~TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter~TIGRFAM: excinuclease ABC%2C A subunit gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2752 Trad_2753 Trad_2753 Trad_2753 3001421 3001954 + hypothetical protein KEGG: dra:DR_0056 benzoate membrane transport protein%2C putative~SPTR: Q2B5I1 Putative uncharacterized protein gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2753 Trad_2754 Trad_2754 Trad_2754 3001951 3002640 + phospholipid/glycerol acyltransferase COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase~InterPro IPR002123~KEGG: sth:STH1669 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~SPTR: Q67NT9 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: Acyltransferase~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2754 Trad_2755 Trad_2755 Trad_2755 3002729 3003028 + histone family protein DNA-binding protein COGs: COG0776 Bacterial nucleoid DNA-binding protein~InterPro IPR000119:IPR020816:IPR010992~KEGG: ttj:TTHA1349 DNA-binding protein HU (DNA-binding protein II)~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein~SPTR: Q72IZ7 Putative DNA binding protein~PFAM: Bacterial DNA-binding protein gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2755 Trad_2756 Trad_2756 Trad_2756 3003165 3003881 + L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit COGs: COG1760 L-serine deaminase~InterPro IPR004643:IPR005131:IPR002912~KEGG: ttj:TTHA0739 L-serine dehydratase%2C beta subunit~PFAM: serine dehydratase beta chain%3B amino acid-binding ACT domain protein~PRIAM: L-serine ammonia-lyase~SPTR: Q5SKA9 L-serine dehydratase%2C beta subunit~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit~PFAM: ACT domain%3B Serine dehydratase beta chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2756 Trad_2757 Trad_2757 Trad_2757 3003871 3004704 + L-serine ammonia-lyase COGs: COG1760 L-serine deaminase~InterPro IPR005130~KEGG: dge:Dgeo_1331 L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit~PFAM: serine dehydratase alpha chain~PRIAM: L-serine ammonia-lyase~SPTR: Q1IYQ7 L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit~PFAM: Serine dehydratase alpha chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2757 Trad_2758 Trad_2758 Trad_2758 3004831 3006228 + NADH dehydrogenase (ubiquinone) COGs: COG1252 NADH dehydrogenase FAD-containing subunit~InterPro IPR013027~KEGG: rmr:Rmar_2662 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: NADH dehydrogenase (ubiquinone)~SPTR: D0MGH1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2758 Trad_2759 Trad_2759 Trad_2759 3006271 3007074 + inositol monophosphatase COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family~InterPro IPR000760:IPR019825:IPR020583:IPR020550~KEGG: gme:Gmet_0697 inositol monophosphatase~PFAM: inositol monophosphatase~SPTR: C1XNH9 Inositol monophosphatase/fructose-1%2C6-bisphosphatase family protein~PFAM: Inositol monophosphatase family gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2759 Trad_2760 Trad_2760 Trad_2760 3007077 3007853 + pseudogene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2760 Trad_2761 Trad_2761 Trad_2761 3007920 3009620 - hypothetical protein KEGG: nmr:Nmar_1073 fibronectin type III domain-containing protein~SPTR: A1ZFM9 Collagenase%2C putative gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2761 Trad_2762 Trad_2762 Trad_2762 3010225 3010722 + transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: dge:Dgeo_1406 BadM/Rrf2 family transcriptional regulator~PFAM: protein of unknown function UPF0074~SPTR: Q1IYI3 Transcriptional regulator%2C BadM/Rrf2 family~TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: Transcriptional regulator~TIGRFAM: rrf2 family protein (putative transcriptional regulator) gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2762 Trad_2763 Trad_2763 Trad_2763 3010829 3011812 + Alcohol dehydrogenase zinc-binding domain protein COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase~InterPro IPR016040:IPR013154:IPR013149:IPR011032~KEGG: dra:DR_1061 NADPH quinone oxidoreductase%2C putative~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~SPTR: C1XGW7 Zn-dependent oxidoreductase%2C NADPH:quinone reductase~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2763 Trad_2764 Trad_2764 Trad_2764 3011868 3012650 + peptidase C26 COGs: COG2071 glutamine amidotransferase~InterPro IPR017926:IPR011697~KEGG: tro:trd_1022 probable glutamine amidotransferase~PFAM: peptidase C26~SPTR: B9L018 Probable glutamine amidotransferase~PFAM: Peptidase C26 gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2764 Trad_2765 Trad_2765 Trad_2765 3012666 3012824 + conserved hypothetical protein KEGG: hypothetical protein~SPTR: B3LDC8 Putative uncharacterized protein gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2765 Trad_2766 Trad_2766 Trad_2766 3012831 3013919 + Prephenate dehydrogenase COGs: COG0287 Prephenate dehydrogenase~InterPro IPR003099:IPR002912:IPR016040~KEGG: dge:Dgeo_1040 prephenate dehydrogenase~PFAM: Prephenate dehydrogenase%3B amino acid-binding ACT domain protein~SPTR: Q1IZJ5 Prephenate dehydrogenase~PFAM: Prephenate dehydrogenase%3B ACT domain gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2766 Trad_2767 Trad_2767 Trad_2767 3013921 3014166 + conserved hypothetical protein KEGG: dge:Dgeo_0440 hypothetical protein~SPTR: Q1J191 Putative uncharacterized protein gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2767 Trad_2768 Trad_2768 Trad_2768 3014257 3015267 + molybdenum cofactor biosynthesis protein A COGs: COG2896 Molybdenum cofactor biosynthesis protein~InterProIPR000385:IPR013483:IPR006638:IPR013785:IPR 007197:IPR010505~KEGG: ttj:TTHA0011 molybdenum cofactor biosynthesis protein A (MoaA)~PFAM: Radical SAM domain protein%3B molybdenum cofactor synthesis domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Q72G60 Molybdenum cofactor biosynthesis protein A~TIGRFAM: molybdenum cofactor biosynthesis protein A~PFAM: Molybdenum Cofactor Synthesis C%3B Radical SAM superfamily~TIGRFAM: molybdenum cofactor biosynthesis protein A%2C bacterial gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2768 Trad_2769 Trad_2769 Trad_2769 3015281 3016165 - metallophosphoesterase COGs: COG1408 phosphohydrolase~InterPro IPR006311:IPR017909:IPR004843~KEGG: dge:Dgeo_0219 twin-arginine translocation pathway signal~PFAM: metallophosphoesterase~SPTR: C1XUB6 Predicted phosphohydrolase~PFAM: Calcineurin-like phosphoesterase~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2769 Trad_2770 Trad_2770 Trad_2770 3016229 3016609 - response regulator receiver protein COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR001789:IPR011006~KEGG: afw:Anae109_0889 two component%2C sigma54 specific%2C fis family transcriptional regulator~PFAM: response regulator receiver~SMART: response regulator receiver~SPTR: C1XSI8 Response regulator with CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains~PFAM: Response regulator receiver domain gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2770 Trad_2771 Trad_2771 Trad_2771 3016670 3017842 - acetyl-CoA acetyltransferase COGs: COG0183 Acetyl-CoA acetyltransferase~InterPro IPR002155:IPR016038:IPR016039~KEGG: chl:Chy400_3476 acetyl-CoA acetyltransferase~PRIAM: Acetyl-CoA C-acyltransferase~SPTR: B9LCI5 Acetyl-CoA acetyltransferase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase%2C C-terminal domain%3B Thiolase%2C N-terminal domain~TIGRFAM: acetyl-CoA acetyltransferases gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2771 Trad_2772 Trad_2772 Trad_2772 3018018 3018464 - hypothetical protein KEGG: afw:Anae109_0333 hypothetical protein~SPTR: A7H752 Putative uncharacterized protein gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2772 Trad_2773 Trad_2773 Trad_2773 3018634 3020031 - PAS/PAC sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterProIPR000014:IPR001610:IPR003594:IPR005467:IPR 000700:IPR013767:IPR011712~KEGG: hla:Hlac_3597 PAS/PAC sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B PAS fold domain protein%3B histidine kinase dimerisation and phosphoacceptor region~SMART: PAC repeat-containing protein%3B PAS domain containing protein%3B ATP-binding region ATPase domain protein~SPTR: B9LXB3 Sensor protein~TIGRFAM: PAS sensor protein~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B PAS fold~TIGRFAM: PAS domain S-box gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2773 Trad_2774 Trad_2774 Trad_2774 3020674 3020907 - ChaB family protein COGs: COG4572 Putative cation transport regulator~InterPro IPR009317~KEGG: mma:MM_0773 putative cation transport regulator~PFAM: ChaB family protein~SPTR: Q8PYS9 Putative cation transport regulator~PFAM: ChaB gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2774 Trad_2775 Trad_2775 Trad_2775 3020919 3021791 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR016040~KEGG: gym:GYMC10_4924 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B4AYA6 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2775 Trad_2776 Trad_2776 Trad_2776 3021844 3022662 - conserved hypothetical protein COGs: COG3346 conserved hypothetical protein~InterPro IPR002994~KEGG: rca:Rcas_1199 hypothetical protein~SPTR: A7NIJ6 Putative uncharacterized protein~PFAM: SURF1 family gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2776 Trad_2777 Trad_2777 Trad_2777 3022756 3025467 - cytochrome c oxidase%2C subunit I COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1~InterPro IPR000883:IPR014241:IPR000298~KEGG: ttj:TTHA0312 cytochrome caa3 oxidase subunit I (polypeptide I + III)~PFAM: cytochrome c oxidase subunit I%3B cytochrome c oxidase subunit III~SPTR: C1XWH9 Cytochrome c oxidase%2C subunit I~TIGRFAM: cytochrome c oxidase%2C subunit I~PFAM: Cytochrome c oxidase subunit III%3B Cytochrome C and Quinol oxidase polypeptide I~TIGRFAM: cytochrome c oxidase%2C subunit I gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2777 Trad_2778 Trad_2778 Trad_2778 3025464 3026615 - cytochrome c oxidase%2C subunit II COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2~InterProIPR014222:IPR008972:IPR009056:IPR002429:IPR 011759:IPR003088:IPR015964~KEGG: aca:ACP_2435 cytochrome c oxidase%2C subunit II~PFAM: cytochrome c oxidase subunit II%3B cytochrome C oxidase subunit II transmembrane region%3B cytochrome c class I~SPTR: C1F1C9 Cytochrome c oxidase subunit 2~TIGRFAM: cytochrome c oxidase%2C subunit II~PFAM: Cytochrome c%3B Cytochrome C oxidase subunit II%2C periplasmic domain%3B Cytochrome C oxidase subunit II%2C transmembrane domain~TIGRFAM: cytochrome c oxidase%2C subunit II gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2778 Trad_2779 Trad_2779 Trad_2779 3026626 3027522 - protoheme IX farnesyltransferase COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor)~InterPro IPR006369:IPR000537~KEGG: ttj:TTHA0310 cytochrome c oxidase assembly factor (CtaA) + protoheme IX farnesyltransferase (CtaB)~PFAM: UbiA prenyltransferase~SPTR: Q5SLI3 Protoheme IX farnesyltransferase~TIGRFAM: protoheme IX farnesyltransferase~PFAM: UbiA prenyltransferase family~TIGRFAM: protoheme IX farnesyltransferase gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2779 Trad_2780 Trad_2780 Trad_2780 3027519 3028523 - cytochrome oxidase assembly COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly~InterPro IPR003780~KEGG: mxa:MXAN_0602 cytochrome oxidase assembly protein~PFAM: cytochrome oxidase assembly~SPTR: Q1DEQ3 Cytochrome oxidase assembly protein~PFAM: Cytochrome oxidase assembly protein gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2780 Trad_2781 Trad_2781 Trad_2781 3028906 3029427 + hypothetical protein KEGG: ote:Oter_1536 hypothetical protein~SPTR: B1ZTN4 Putative uncharacterized protein gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2781 Trad_2782 Trad_2782 Trad_2782 3029513 3030352 + LmbE family protein COGs: COG2120 conserved hypothetical protein LmbE homologs~InterPro IPR003737~KEGG: dge:Dgeo_1971 LmbE-like protein protein~PFAM: LmbE family protein~SPTR: Q1IWW9 LmbE-like protein protein~PFAM: GlcNAc-PI de-N-acetylase gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2782 Trad_2783 Trad_2783 Trad_2783 3030491 3031564 + Tetratricopeptide TPR_2 repeat protein InterProIPR019734:IPR011990:IPR013026:IPR001440:IPR 013105~KEGG: cyp:PCC8801_1300 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein~SPTR: B7K3M3 TPR repeat-containing protein~PFAM: Tetratricopeptide repeat gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2783 Trad_2784 Trad_2784 Trad_2784 3031743 3032570 + ribosomal protein S2 COGs: COG0052 Ribosomal protein S2~InterPro IPR001865:IPR018130:IPR005706~KEGG: dge:Dgeo_1049 30S ribosomal protein S2~PFAM: ribosomal protein S2~SPTR: Q1IZI6 30S ribosomal protein S2~TIGRFAM: ribosomal protein S2~PFAM: Ribosomal protein S2~TIGRFAM: ribosomal protein S2%2C bacterial type gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2784 Trad_2785 Trad_2785 Trad_2785 3032667 3033260 + translation elongation factor Ts COGs: COG0264 Translation elongation factor Ts~InterProIPR018101:IPR001816:IPR014039:IPR000449:IPR 009060~KEGG: pmx:PERMA_0232 translation elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B dimerisation%3B ubiquitin-associated- domain-containing protein~SPTR: C0QTL3 Elongation factor Ts~TIGRFAM: translation elongation factor Ts~PFAM: Elongation factor TS%3B UBA/TS-N domain~TIGRFAM: translation elongation factor Ts gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2785 Trad_2786 Trad_2786 Trad_2786 3033311 3034054 + uridylate kinase COGs: COG0528 Uridylate kinase~InterPro IPR011817:IPR015963:IPR001048~KEGG: ttj:TTHA0859 uridylate kinase~PFAM: aspartate/glutamate/uridylate kinase~SPTR: C1XT35 Uridylate kinase~TIGRFAM: uridylate kinase~PFAM: Amino acid kinase family~TIGRFAM: uridylate kinase gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2786 Trad_2787 Trad_2787 Trad_2787 3034096 3034650 + ribosome recycling factor COGs: COG0233 Ribosome recycling factor~InterPro IPR002661~KEGG: bha:BH2424 ribosome recycling factor~PFAM: ribosome recycling factor~SPTR: A8VS49 Flagellar biosynthetic protein FlhB~TIGRFAM: ribosome recycling factor~PFAM: Ribosome recycling factor~TIGRFAM: ribosome recycling factor gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2787 Trad_2788 Trad_2788 Trad_2788 3034682 3035557 + phosphatidate cytidylyltransferase COGs: COG0575 CDP-diglyceride synthetase~InterPro IPR000374~KEGG: ddr:Deide_13220 putative phosphatidate cytidylyltransferase (CDP-diglyceride synthetase)~PFAM: phosphatidate cytidylyltransferase~SPTR: C1CVP2 Phosphatidate cytidylyltransferase~PFAM: Cytidylyltransferase family gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2788 Trad_2789 Trad_2789 Trad_2789 3035599 3036168 + protein of unknown function DUF177 COGs: COG1399 metal-binding possibly nucleic acid-binding protein~InterPro IPR003772~KEGG: ttj:TTHA0419 hypothetical protein~PFAM: protein of unknown function DUF177~SPTR: C1XMM8 Predicted metal-binding protein%2C possibly nucleic-acid binding~PFAM: Uncharacterized ACR%2C COG1399 gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2789 Trad_2790 Trad_2790 Trad_2790 3036211 3036399 + ribosomal protein L32 COGs: COG0333 Ribosomal protein L32~InterPro IPR002677~KEGG: ttj:TTHA0418 50S ribosomal protein L32~PFAM: ribosomal L32p protein~SPTR: P80339 50S ribosomal protein L32~TIGRFAM: ribosomal protein L32~PFAM: Ribosomal L32p protein family~TIGRFAM: ribosomal protein L32 gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2790 Trad_2791 Trad_2791 Trad_2791 3036550 3037542 + 3-oxoacyl-(acyl-carrier-protein) synthase III COGs: COG0332 3-oxoacyl-(acyl-carrier-protein)~InterProIPR004655:IPR016038:IPR013751:IPR013747:IPR 016039~KEGG: ttj:TTHA0417 3-oxoacyl-[acyl carrier protein] synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III~SPTR: C1XKP3 3-oxoacyl-(Acyl-carrier-protein) synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2791 Trad_2792 Trad_2792 Trad_2792 3037539 3038462 + malonyl CoA-acyl carrier protein transacylase COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase~InterProIPR004410:IPR001227:IPR014043:IPR016035:IPR 016036~KEGG: ttj:TTHA0416 malonyl CoA-[acyl carrier protein] transacylase~PFAM: Acyl transferase~SPTR: C1XP82 (Acyl-carrier-protein) S-malonyltransferase~TIGRFAM: malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase domain~TIGRFAM: malonyl CoA-acyl carrier protein transacylase gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2792 Trad_2793 Trad_2793 Trad_2793 3038459 3039208 + 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR011284:IPR016040~KEGG: dra:DR_1943 3-oxoacyl-acyl carrier protein reductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Q9RT26 3-oxoacyl-acyl carrier protein reductase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short chain dehydrogenase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2793 Trad_2794 Trad_2794 Trad_2794 3039291 3039530 + acyl carrier protein COGs: COG0236 Acyl carrier protein~InterPro IPR006162:IPR003231:IPR009081:IPR006163~KEGG: ttj:TTHA0414 acyl carrier protein~PFAM: phosphopantetheine-binding~SPTR: B7A835 Acyl carrier protein~TIGRFAM: acyl carrier protein~PFAM: Phosphopantetheine attachment site~TIGRFAM: acyl carrier protein gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2794 Trad_2795 Trad_2795 Trad_2795 3039637 3040869 + 3-oxoacyl-(acyl-carrier-protein) synthase 2 COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase~InterProIPR018201:IPR017568:IPR016038:IPR014030:IPR 014031:IPR016039~KEGG: ttj:TTHA0413 3-oxoacyl-[acyl carrier protein] synthase II~PFAM: Beta-ketoacyl synthase~SPTR: Q72LL4 3-oxoacyl-[acyl-carrier-protein] synthase~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase%2C N-terminal domain%3B Beta-ketoacyl synthase%2C C-terminal domain~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2 gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2795 Trad_2796 Trad_2796 Trad_2796 3041164 3041722 - pseudogene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2796 Trad_2797 Trad_2797 Trad_2797 3041763 3042713 - cysteine synthase A COGs: COG0031 Cysteine synthase~InterPro IPR001216:IPR005856:IPR005859:IPR001926~KEGG: dge:Dgeo_1657 cysteine synthase A~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~SPTR: Q1IXT2 Cysteine synthase~TIGRFAM: cysteine synthase A%3B cysteine synthase~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2797 Trad_2798 Trad_2798 Trad_2798 3042885 3043190 + hypothetical protein KEGG: tye:THEYE_A1545 DnaK suppressor protein~SPTR: B4FXB1 Putative uncharacterized protein gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2798 Trad_2799 Trad_2799 Trad_2799 3043352 3044200 + degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: ttj:TTHA0951 DegV family protein~PFAM: DegV family protein~SPTR: C1XND6 DegV family protein~TIGRFAM: degV family protein~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2799 Trad_2800 Trad_2800 Trad_2800 3044261 3045742 + Mg chelatase%2C subunit ChlI COGs: COG0606 ATPase with chaperone activity~InterProIPR004482:IPR003593:IPR001208:IPR000523:IPR 020568~KEGG: ddr:Deide_17930 putative Mg2+ chelatase family protein~PFAM: magnesium chelatase ChlI subunit~SMART: AAA ATPase~SPTR: C1CX62 Putative Mg2+ chelatase family protein~TIGRFAM: Mg chelatase%2C subunit ChlI~PFAM: Magnesium chelatase%2C subunit ChlI~TIGRFAM: Mg chelatase-related protein gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2800 Trad_2801 Trad_2801 Trad_2801 3045739 3045996 - hypothetical protein KEGG: hypothetical protein %3B K11653 AT-rich interactive domain-containing protein 1~SPTR: B0WTH6 Putative uncharacterized protein gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2801 Trad_2802 Trad_2802 Trad_2802 3046195 3047259 + cytochrome c oxidase%2C subunit II COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2~InterProIPR002429:IPR001505:IPR014222:IPR008972:IPR 009056:IPR011759:IPR003088:IPR015964~KEGG: sth:STH2096 cytochrome c oxidase subunit II~PFAM: cytochrome c oxidase subunit II%3B cytochrome C oxidase subunit II transmembrane region%3B cytochrome c class I~SPTR: Q67ML2 Cytochrome c oxidase subunit 2~TIGRFAM: cytochrome c oxidase%2C subunit II~PFAM: Cytochrome c%3B Cytochrome C oxidase subunit II%2C periplasmic domain%3B Cytochrome C oxidase subunit II%2C transmembrane domain~TIGRFAM: cytochrome c oxidase%2C subunit II gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2802 Trad_2803 Trad_2803 Trad_2803 3047303 3049270 + cytochrome c oxidase%2C subunit I COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1~InterPro IPR000883:IPR014241~KEGG: ote:Oter_2071 cytochrome c oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I~SPTR: B1ZMS6 Cytochrome c oxidase%2C subunit I~TIGRFAM: cytochrome c oxidase%2C subunit I~PFAM: Cytochrome C and Quinol oxidase polypeptide I~TIGRFAM: cytochrome c oxidase%2C subunit I gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2803 Trad_2804 Trad_2804 Trad_2804 3049267 3049878 + cytochrome c oxidase subunit III COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3~InterPro IPR000298~KEGG: sti:Sthe_1584 cytochrome c oxidase subunit III~PFAM: cytochrome c oxidase subunit III~SPTR: D1C451 Cytochrome c oxidase subunit III~PFAM: Cytochrome c oxidase subunit III gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2804 Trad_2805 Trad_2805 Trad_2805 3049886 3051280 + cytochrome c class I InterPro IPR009056:IPR003088~KEGG: dge:Dgeo_0810 cytochrome c%2C class I~PFAM: cytochrome c class I~SPTR: C1XTX3 Cytochrome c553~PFAM: Cytochrome c gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2805 Trad_2806 Trad_2806 Trad_2806 3051282 3052082 + Cytochrome c oxidase caa3-type%2C assembly factor CtaG-related protein COGs: COG3336 membrane protein~InterPro IPR019108~KEGG: ote:Oter_2068 membrane protein-like protein~PFAM: Cytochrome c oxidase caa3-type%2C assembly factor CtaG-related~SPTR: C0AF21 Membrane protein-like protein~PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)~TIGRFAM: cytochrome c oxidase assembly factor CtaG gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2806 Trad_2807 Trad_2807 Trad_2807 3052119 3052553 + hypothetical protein KEGG: nca:Noca_3574 hypothetical protein~SPTR: A1SMN9 Putative uncharacterized protein gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2807 Trad_2808 Trad_2808 Trad_2808 3052641 3053264 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 COGs: COG1011 hydrolase (HAD superfamily)~InterPro IPR005833:IPR006402:IPR005834~KEGG: dge:Dgeo_1288 HAD family hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: Q1IYV0 HAD-superfamily hydrolase subfamily IA%2C variant 3~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2808 Trad_2809 Trad_2809 Trad_2809 3053261 3053599 + conserved hypothetical protein KEGG: dra:DR_2156 hypothetical protein~SPTR: Q9RSG8 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF3208) gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2809 Trad_2810 Trad_2810 Trad_2810 3053596 3053817 - hypothetical protein KEGG: cyn:Cyan7425_2579 peptidase A24A domain protein~SPTR: A4AFF8 Peptidase A24A-like protein gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2810 Trad_2811 Trad_2811 Trad_2811 3053820 3054311 - conserved repeat domain protein InterPro IPR001434~KEGG: mes:Meso_1518 hypothetical protein~SPTR: B4WY82 Conserved repeat domain protein~TIGRFAM: conserved repeat domain protein~PFAM: Domain of unknown function DUF11~TIGRFAM: conserved repeat domain gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2811 Trad_2812 Trad_2812 Trad_2812 3054482 3055420 - pyridoxine biosynthesis protein COGs: COG0214 Pyridoxine biosynthesis enzyme~InterPro IPR001852:IPR011060~KEGG: ddr:Deide_11610 putative pyridoxine biosynthesis enzyme~PFAM: Vitamin B6 biosynthesis protein~SPTR: C1XQR1 Pyridoxal phosphate synthase yaaD subunit~TIGRFAM: pyridoxine biosynthesis protein~PFAM: SOR/SNZ family~TIGRFAM: pyridoxine biosynthesis protein gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2812 Trad_2813 Trad_2813 Trad_2813 3055684 3056943 + hypothetical protein KEGG: syf:Synpcc7942_0117 thiol methyltransferase 1-like~SPTR: Q5N293 Similar to thiol methyltransferase 1 gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2813 Trad_2814 Trad_2814 Trad_2814 3056991 3058046 - anthranilate phosphoribosyltransferase COGs: COG0547 Anthranilate phosphoribosyltransferase~InterPro IPR005940:IPR020072:IPR000312:IPR017459~KEGG: dge:Dgeo_0986 anthranilate phosphoribosyltransferase~PFAM: glycosyl transferase family 3%3B Glycosyl transferase%2C family 3-like~SPTR: Q1IZP8 Anthranilate phosphoribosyltransferase~TIGRFAM: anthranilate phosphoribosyltransferase~PFAM: Glycosyl transferase family%2C a/b domain%3B Glycosyl transferase family%2C helical bundle domain~TIGRFAM: anthranilate phosphoribosyltransferase gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2814 Trad_2815 Trad_2815 Trad_2815 3058043 3058909 - glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: mxa:MXAN_7448 glycosyl transferase%2C group 2 family protein~PFAM: glycosyl transferase family 2~SPTR: C1XG84 Predicted glycosyltransferase~PFAM: Glycosyl transferase family 2 gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2815 Trad_2816 Trad_2816 Trad_2816 3058943 3059518 - glutamine amidotransferase of anthranilate synthase COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II~InterProIPR006220:IPR011702:IPR001317:IPR006221:IPR 017926:IPR000991~KEGG: ttj:TTHA1843 anthranilate synthase component II~PFAM: glutamine amidotransferase class-I~SPTR: C1XG81 Anthranilate synthase%2C component II~TIGRFAM: glutamine amidotransferase of anthranilate synthase~PFAM: Glutamine amidotransferase class-I~TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2816 Trad_2817 Trad_2817 Trad_2817 3059627 3060022 - S23 ribosomal protein InterPro IPR008815~KEGG: cph:Cpha266_2609 S23 ribosomal protein~PFAM: S23 ribosomal protein~SPTR: A1BJM0 S23 ribosomal protein~manually curated~PFAM: S23 ribosomal protein gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2817 Trad_2818 Trad_2818 Trad_2818 3060025 3061479 - anthranilate synthase component I COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I~InterProIPR019999:IPR005256:IPR005801:IPR006805:IPR 015890~KEGG: dge:Dgeo_0983 anthranilate synthase component I~PFAM: Chorismate binding-like%3B Anthranilate synthase component I domain protein~PRIAM: Anthranilate synthase~SPTR: C1XR73 Anthranilate synthase%2C component I~TIGRFAM: anthranilate synthase component I~PFAM: Anthranilate synthase component I%2C N terminal region%3B chorismate binding enzyme~TIGRFAM: anthranilate synthase component I%2C non-proteobacterial lineages gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2818 Trad_2819 Trad_2819 Trad_2819 3061632 3062036 - PilT protein domain protein COGs: COG4113 nucleic acid-binding protein contains PIN domain~InterPro IPR002716~KEGG: msl:Msil_3484 PilT protein domain protein~PFAM: PilT protein domain protein~SPTR: B8ETM1 PilT protein domain protein~PFAM: PIN domain gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2819 Trad_2820 Trad_2820 Trad_2820 3062049 3062273 - conserved hypothetical protein KEGG: msl:Msil_3485 hypothetical protein~SPTR: B8ETM2 Putative uncharacterized protein gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2820 Trad_2821 Trad_2821 Trad_2821 3062412 3062978 + hypothetical protein KEGG: rso:RSc2499 putative multidrug resistance protein~SPTR: Q8XWH5 Putative multidrug resistance protein gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2821 Trad_2822 Trad_2822 Trad_2822 3063032 3063679 - conserved hypothetical protein KEGG: dsh:Dshi_0735 hypothetical protein~SPTR: Q9R6F9 Tiorf100 protein gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2822 Trad_2823 Trad_2823 Trad_2823 3063701 3064501 - short-chain dehydrogenase/reductase SDR COGs: COG0623 Enoyl-(acyl-carrier-protein)~InterPro IPR002347:IPR001986:IPR016040:IPR002198~KEGG: ttj:TTHA0304 enoyl-[acyl carrier protein] reductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: B7A8H7 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2823 Trad_2824 Trad_2824 Trad_2824 3064525 3065289 - Silent information regulator protein Sir2 COGs: COG0846 NAD-dependent protein deacetylase SIR2 family~InterPro IPR001020:IPR003000~KEGG: tth:TTC1026 hypothetical protein~PFAM: Silent information regulator protein Sir2~SPTR: B7A5M4 Silent information regulator protein Sir2~PFAM: Sir2 family gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2824 Trad_2825 Trad_2825 Trad_2825 3065292 3066782 - protein of unknown function DUF21 COGs: COG1253 Hemolysins and related protein containing CBS domains~InterPro IPR000644:IPR002550:IPR005170~KEGG: ttj:TTHA0734 hemolysin-related protein~PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~SMART: CBS domain containing protein~SPTR: B7AA79 Putative uncharacterized protein~PFAM: CBS domain%3B Domain of unknown function DUF21%3B Transporter associated domain gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2825 Trad_2826 Trad_2826 Trad_2826 3066936 3067565 + deoxynucleoside kinase COGs: COG1428 Deoxynucleoside kinase~InterPro IPR002624~KEGG: dra:DR_0299 deoxyguanosine kinase/deoxyadenosine kinase subunit~PFAM: deoxynucleoside kinase~SPTR: B7A800 Deoxynucleoside kinase~PFAM: Deoxynucleoside kinase gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2826 Trad_2827 Trad_2827 Trad_2827 3067565 3068197 + deoxynucleoside kinase COGs: COG1428 Deoxynucleoside kinase~InterPro IPR002624~KEGG: dra:DR_0298 deoxyguanosine kinase/deoxyadenosine kinase subunit~PFAM: deoxynucleoside kinase~SPTR: B7A801 Deoxynucleoside kinase~PFAM: Deoxynucleoside kinase gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2827 Trad_2828 Trad_2828 Trad_2828 3068222 3069736 + UDP-N-acetylmuramyl-tripeptide synthetase COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase~InterPro IPR005761:IPR013221:IPR004101:IPR000713~KEGG: ddr:Deide_21580 putative UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6- diaminopimelate ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: C1XPI4 UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2828 Trad_2829 Trad_2829 Trad_2829 3069801 3071030 - hypothetical protein KEGG: avn:Avin_10880 alginate biosynthesis protein AlgV~SPTR: C1DP87 Alginate biosynthesis protein AlgV gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2829 Trad_2830 Trad_2830 Trad_2830 3071045 3072451 - membrane bound O-acyl transferase MBOAT family protein COGs: COG1696 membrane protein involved in D-alanine export~InterPro IPR004299~KEGG: pmy:Pmen_1023 membrane bound O-acyl transferase%2C MBOAT family protein~PFAM: membrane bound O-acyl transferase MBOAT family protein~SPTR: A6EZ61 Alginate O-acetylation protein AlgI~PFAM: MBOAT family gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2830 Trad_2831 Trad_2831 Trad_2831 3072471 3073130 - hypothetical protein KEGG: pmy:Pmen_1021 hypothetical protein~SPTR: A6EZ59 Alginate O-acetyltransferase~PFAM: Alginate O-acetyl transferase AlgF gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2831 Trad_2832 Trad_2832 Trad_2832 3073327 3074607 + pyrimidine-nucleoside phosphorylase COGs: COG0213 Thymidine phosphorylase~InterProIPR000053:IPR017872:IPR018090:IPR020072:IPR 000312:IPR017459:IPR013102~KEGG: dge:Dgeo_2180 pyrimidine-nucleoside phosphorylase~PFAM: glycosyl transferase family 3%3B Glycosyl transferase%2C family 3-like%3B Pyrimidine nucleoside phosphorylase domain~PRIAM: Pyrimidine-nucleoside phosphorylase~SPTR: Q1IWB0 Pyrimidine-nucleoside phosphorylase~TIGRFAM: pyrimidine-nucleoside phosphorylase~PFAM: Glycosyl transferase family%2C a/b domain%3B Pyrimidine nucleoside phosphorylase C-terminal domain%3B Glycosyl transferase family%2C helical bundle domain~TIGRFAM: pyrimidine-nucleoside phosphorylase gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2832 Trad_2833 Trad_2833 Trad_2833 3074614 3075012 + Mov34/MPN/PAD-1 family protein COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily~InterPro IPR000555~KEGG: dge:Dgeo_1653 Mov34/MPN/PAD-1~PFAM: Mov34/MPN/PAD-1 family protein~SMART: Mov34/MPN/PAD-1 family protein~SPTR: Q1IXT6 Predicted metal-dependent protease%2C Mov34/MPN/PAD-1~PFAM: Mov34/MPN/PAD-1 family gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2833 Trad_2834 Trad_2834 Trad_2834 3075080 3075241 - hypothetical protein gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2834 Trad_2835 Trad_2835 Trad_2835 3075317 3075661 + hypothetical protein KEGG: npu:Npun_R4329 hypothetical protein~SPTR: B4WUI0 Transposase%2C IS4 family protein gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2835 Trad_2836 Trad_2836 Trad_2836 3075687 3076076 + conserved hypothetical protein KEGG: gur:Gura_1849 hypothetical protein~SPTR: A5GAG6 Putative uncharacterized protein~PFAM: Transposase gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2836 Trad_2837 Trad_2837 Trad_2837 3076085 3076933 + Integrase catalytic region InterPro IPR001584:IPR012337~KEGG: gur:Gura_1848 integrase catalytic subunit~PFAM: Integrase catalytic region~SPTR: A5GAG7 Integrase%2C catalytic region~manually curated~PFAM: Integrase core domain gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2837 Trad_2838 Trad_2838 Trad_2838 3077237 3077395 + pseudogene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2838 Trad_2839 Trad_2839 Trad_2839 3078313 3080205 - hypothetical protein KEGG: lac:LBA1300 oligopeptide ABC transporter substrate binding protein~SPTR: A2P810 RTX protein gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2839 Trad_2840 Trad_2840 Trad_2840 3080409 3081206 + UBA/THIF-type NAD/FAD binding protein COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2~InterPro IPR016040:IPR000594:IPR007901:IPR009036~KEGG: tth:TTC0979 molybdopterin biosynthesis MoeB protein~PFAM: UBA/THIF-type NAD/FAD binding protein%3B MoeZ/MoeB domain protein~SPTR: B6ZH72 tRNA-two-thiouridine synthesizing protein C~PFAM: MoeZ/MoeB domain%3B ThiF family gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2840 Trad_2841 Trad_2841 Trad_2841 3081319 3082353 + 3-isopropylmalate dehydrogenase COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase~InterPro IPR019818:IPR001804~KEGG: ttj:TTHA1378 homoisocitrate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase~PRIAM: 3-isopropylmalate dehydrogenase~SPTR: B7A5P1 3-isopropylmalate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase~TIGRFAM: 3-isopropylmalate dehydrogenase%3B isopropylmalate/isohomocitrate dehydrogenases gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2841 Trad_2842 Trad_2842 Trad_2842 3082456 3083223 - pseudogene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2842 Trad_2843 Trad_2843 Trad_2843 3083807 3085567 - hypothetical protein KEGG: cms:CMS_0820 putative two component system response regulator~SPTR: B0RF03 Putative two component system response regulator gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2843 Trad_2844 Trad_2844 Trad_2844 3085858 3086718 + protein of unknown function DUF214 COGs: COG2177 Cell division protein~InterPro IPR003838~KEGG: dra:DR_1550 FtsE protein~PFAM: protein of unknown function DUF214~SPTR: Q9RU44 FtsE protein~PFAM: Predicted permease gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2844 Trad_2845 Trad_2845 Trad_2845 3086721 3088082 + Peptidase M23 COGs: COG1196 Chromosome segregation ATPase~InterPro IPR016047:IPR011055~KEGG: tth:TTC0705 hypothetical protein~PFAM: Peptidase M23~SPTR: Q72JR3 Putative uncharacterized protein~PFAM: Peptidase family M23 gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2845 Trad_2846 Trad_2846 Trad_2846 3088136 3089767 + adenylate/guanylate cyclase COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain)~InterPro IPR001054~KEGG: fal:FRAAL0057 putative adenylate cyclase~PFAM: adenylyl cyclase class-3/4/guanylyl cyclase~SMART: adenylyl cyclase class-3/4/guanylyl cyclase~SPTR: C9NAV2 Adenylate/guanylate cyclase~PFAM: Adenylate and Guanylate cyclase catalytic domain gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2846 Trad_2847 Trad_2847 Trad_2847 3089918 3090652 - conserved hypothetical protein KEGG: tth:TTC0903 hypothetical protein~SPTR: C1XVU4 Putative uncharacterized protein gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2847 Trad_2848 Trad_2848 Trad_2848 3090876 3091868 + Pyridoxal-5'-phosphate-dependent protein beta subunit COGs: COG1171 Threonine dehydratase~InterPro IPR001926~KEGG: ttr:Tter_0227 pyridoxal-5'-phosphate-dependent protein beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~SPTR: D1CDZ3 Pyridoxal-5'-phosphate-dependent protein beta subunit~PFAM: Pyridoxal-phosphate dependent enzyme gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2848 Trad_2849 Trad_2849 Trad_2849 3092143 3092664 + protein of unknown function DUF1043 COGs: COG3105 conserved hypothetical protein~InterPro IPR009386~KEGG: ttu:TERTU_3682 hypothetical protein~PFAM: protein of unknown function DUF1043~SPTR: Q2BKL9 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF1043) gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2849 Trad_2850 Trad_2850 Trad_2850 3092661 3093980 - guanine deaminase COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase~InterPro IPR017594:IPR014311:IPR006680:IPR011059~KEGG: sus:Acid_0357 guanine deaminase~PFAM: amidohydrolase~SPTR: C1XTA3 Guanine deaminase~TIGRFAM: guanine deaminase~PFAM: Amidohydrolase family~TIGRFAM: guanine deaminase gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2850 Trad_2851 Trad_2851 Trad_2851 3094220 3095911 + cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: tth:TTC1006 N-acetylmuramoyl-L-alanine amidase~PFAM: cell wall hydrolase/autolysin~SMART: cell wall hydrolase/autolysin~SPTR: C1XIC1 N-acetylmuramoyl-L-alanine amidase~PFAM: N-acetylmuramoyl-L-alanine amidase gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2851 Trad_2852 Trad_2852 Trad_2852 3096183 3096653 + NUDIX hydrolase InterPro IPR020476:IPR020084:IPR000086:IPR015797~KEGG: dge:Dgeo_1007 NUDIX hydrolase~PFAM: NUDIX hydrolase~SPTR: Q1IZM7 NUDIX hydrolase~PFAM: NUDIX domain gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2852 Trad_2853 Trad_2853 Trad_2853 3096650 3097468 + hypothetical protein KEGG: hypothetical protein~SPTR: A8IVR0 Predicted protein (Fragment) gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2853 Trad_2854 Trad_2854 Trad_2854 3097480 3097653 + MarR family transcriptional regulator KEGG: mes:Meso_2109 MarR family transcriptional regulator~SPTR: Q11GH4 Transcriptional regulator%2C MarR family with acetyltransferase activity gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2854 Trad_2855 Trad_2855 Trad_2855 3097927 3099537 + lipopolysaccharide biosynthesis protein COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis~InterPro IPR003856~KEGG: ttj:TTHA0641 hypothetical protein~PFAM: lipopolysaccharide biosynthesis protein~SPTR: Q5SKK2 Putative uncharacterized protein TTHA0641~PFAM: Chain length determinant protein gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2855 Trad_2856 Trad_2856 Trad_2856 3099534 3100889 + nucleotide sugar dehydrogenase COGs: COG1004 UDP-glucose 6-dehydrogenase~InterProIPR017476:IPR016040:IPR014027:IPR001732:IPR 014026:IPR008927~KEGG: dae:Dtox_2846 nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase~PRIAM: UDP-glucose 6-dehydrogenase~SPTR: C8W2C7 Nucleotide sugar dehydrogenase~TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain~TIGRFAM: nucleotide sugar dehydrogenase gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2856 Trad_2857 Trad_2857 Trad_2857 3100905 3101828 + glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: gem:GM21_1643 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: C6MNA5 Glycosyl transferase family 2~PFAM: Glycosyl transferase family 2 gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2857 Trad_2858 Trad_2858 Trad_2858 3101866 3103245 + conserved hypothetical protein KEGG: gvi:glr4237 hypothetical protein~SPTR: Q7NDJ8 Glr4237 protein gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2858 Trad_2859 Trad_2859 Trad_2859 3103248 3104306 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: rce:RC1_2536 glycosyl transferase%2C group 1 family protein~PFAM: glycosyl transferase group 1~SPTR: B6IU40 Glycosyl transferase%2C group 1 family protein~PFAM: Glycosyl transferases group 1 gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2859 Trad_2860 Trad_2860 Trad_2860 3104439 3105422 + GDP-mannose 4%2C6-dehydratase COGs: COG1089 GDP-D-mannose dehydratase~InterPro IPR002198:IPR006368:IPR016040:IPR001509~KEGG: rxy:Rxyl_0567 GDP-mannose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: Q1AYI7 GDP-mannose 4%2C6-dehydratase~TIGRFAM: GDP-mannose 4%2C6-dehydratase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: GDP-mannose 4%2C6-dehydratase gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2860 Trad_2861 Trad_2861 Trad_2861 3105415 3106332 + NAD-dependent epimerase/dehydratase COGs: COG1089 GDP-D-mannose dehydratase~InterPro IPR016040:IPR001509~KEGG: rxy:Rxyl_0568 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: Q1AYI6 NAD-dependent epimerase/dehydratase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: GDP-mannose 4%2C6-dehydratase gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2861 Trad_2862 Trad_2862 Trad_2862 3106319 3107464 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: afr:AFE_1357 glycosyl transferase%2C group 1~PFAM: glycosyl transferase group 1~SPTR: B7J9G1 Glycosyl transferase%2C group 1~PFAM: Glycosyl transferases group 1 gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2862 Trad_2863 Trad_2863 Trad_2863 3107511 3109388 + O-antigen polymerase COGs: COG3307 Lipid A core - O-antigen ligase~InterPro IPR007016~KEGG: hau:Haur_2378 O-antigen polymerase~PFAM: O-antigen polymerase~SPTR: C1XIW3 Lipid A core-O-antigen ligase-like enyme~PFAM: O-Antigen ligase gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2863 Trad_2864 Trad_2864 Trad_2864 3109385 3112567 + Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterProIPR017472:IPR017475:IPR007016:IPR003362:IPR 016040~KEGG: dge:Dgeo_0343 undecaprenyl-phosphate galactosephosphotransferase~PFAM: sugar transferase%3B O-antigen polymerase~PRIAM: Undecaprenyl-phosphate galactose phosphotransferase~SPTR: C1XIW2 Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP%3B exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~PFAM: Bacterial sugar transferase%3B O-Antigen ligase~TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP%3B exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2864 Trad_2865 Trad_2865 Trad_2865 3112620 3113531 + glucose-1-phosphate thymidylyltransferase COGs: COG1209 dTDP-glucose pyrophosphorylase~InterPro IPR005907:IPR005835~KEGG: rxy:Rxyl_3121 glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase~SPTR: Q1ARF0 Glucose-1-phosphate thymidylyltransferase~TIGRFAM: glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase~TIGRFAM: glucose-1-phosphate thymidylyltransferase%2C short form gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2865 Trad_2866 Trad_2866 Trad_2866 3113595 3113747 + hypothetical protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2866 Trad_2867 Trad_2867 Trad_2867 3113744 3114490 + NAD-dependent epimerase/dehydratase COGs: COG1091 dTDP-4-dehydrorhamnose reductase~InterPro IPR016040:IPR001509~KEGG: dra:DR_A0044 dTDP-4-rhamnose reductase-related protein~PFAM: NAD-dependent epimerase/dehydratase~SPTR: C1XU04 dTDP-4-dehydrorhamnose reductase~PFAM: RmlD substrate binding domain~TIGRFAM: dTDP-4-dehydrorhamnose reductase gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2867 Trad_2868 Trad_2868 Trad_2868 3114487 3115080 + dTDP-4-dehydrorhamnose 35-epimerase related protein COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase~InterPro IPR000888:IPR014710:IPR011051~KEGG: dra:DR_A0043 lipopolysaccharide biosynthesis protein%2C putative~PFAM: dTDP-4-dehydrorhamnose 35-epimerase related~SPTR: C1XU05 dTDP-4-dehydrorhamnose 3%2C5-epimerase-like enzyme~PFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2868 Trad_2869 Trad_2869 Trad_2869 3115080 3116120 + dTDP-glucose 4%2C6-dehydratase COGs: COG1088 dTDP-D-glucose 4 6-dehydratase~InterPro IPR002198:IPR005888:IPR016040:IPR001509~KEGG: sti:Sthe_0968 dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: D1C2D7 dTDP-glucose 4%2C6-dehydratase~TIGRFAM: dTDP-glucose 4%2C6-dehydratase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: dTDP-glucose 4%2C6-dehydratase gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2869 Trad_2870 Trad_2870 Trad_2870 3116104 3117036 + undecaprenyl diphosphate synthase COGs: COG0020 Undecaprenyl pyrophosphate synthase~InterPro IPR018520:IPR001441~KEGG: tth:TTC1551 undecaprenyl pyrophosphate synthetase~PFAM: Di-trans-poly-cis-decaprenylcistransferase~PRIAM: Di-trans%2Cpoly-cis-decaprenylcistransferase~SPTR: C1XQW6 Undecaprenyl pyrophosphate synthetase~TIGRFAM: undecaprenyl diphosphate synthase~PFAM: Putative undecaprenyl diphosphate synthase~TIGRFAM: undecaprenyl diphosphate synthase gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2870 Trad_2871 Trad_2871 Trad_2871 3117419 3118456 + Mannose-1-phosphate guanylyltransferase COGs: COG0836 Mannose-1-phosphate guanylyltransferase~InterPro IPR005835:IPR001538~KEGG: dge:Dgeo_0341 mannose-1-phosphate guanylyltransferase (GDP)~PFAM: Nucleotidyl transferase%3B mannose-6-phosphate isomerase type II~PRIAM: Mannose-1-phosphate guanylyltransferase~SPTR: Q1J1J0 Mannose-1-phosphate guanylyltransferase (GDP)~PFAM: Nucleotidyl transferase~TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2871 Trad_2872 Trad_2872 Trad_2872 3118453 3118899 - hypothetical protein KEGG: gox:GOX1949 hypothetical protein~SPTR: Q2BDV1 Oligopeptide ABC transporter%2C oligopeptide-binding protein gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2872 Trad_2873 Trad_2873 Trad_2873 3118963 3119569 - pseudogene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2873 Trad_2874 Trad_2874 Trad_2874 3119598 3122675 - cell division protein FtsK/SpoIIIE COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein~InterPro IPR003593:IPR002543:IPR018541~KEGG: dge:Dgeo_1654 cell divisionFtsK/SpoIIIE~PFAM: cell divisionFtsK/SpoIIIE%3B DNA translocase ftsK gamma~SMART: AAA ATPase~SPTR: Q1IXT5 Cell division protein FtsK~PFAM: Ftsk gamma domain%3B FtsK/SpoIIIE family gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2874 Trad_2875 Trad_2875 Trad_2875 3122755 3124068 - protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: dra:DR_0252 hypothetical protein~PFAM: protein of unknown function UPF0118~SPTR: Q9RXQ6 Putative uncharacterized protein~PFAM: Domain of unknown function DUF20 gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2875 Trad_2876 Trad_2876 Trad_2876 3124190 3126022 - Amylo-alpha-16-glucosidase COGs: COG3408 Glycogen debranching protein~InterPro IPR010401:IPR008928~KEGG: dge:Dgeo_0748 amylo-alpha-1%2C6-glucosidase~PFAM: Amylo-alpha-16-glucosidase~SPTR: C1XTW7 Glycogen debranching enzyme~PFAM: Amylo-alpha-1%2C6-glucosidase gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2876 Trad_2877 Trad_2877 Trad_2877 3126260 3127690 - binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: hor:Hore_00400 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B7AB45 Binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2877 Trad_2878 Trad_2878 Trad_2878 3127690 3128796 - binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: hor:Hore_00390 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: C1XTW5 Carbohydrate ABC transporter membrane protein 1%2C CUT1 family~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2878 Trad_2879 Trad_2879 Trad_2879 3128857 3130098 - extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: dge:Dgeo_0751 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q1J0D1 ABC-type sugar transport system%2C periplasmic component~PFAM: Bacterial extracellular solute-binding protein gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2879 Trad_2880 Trad_2880 Trad_2880 3130209 3131198 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR000048:IPR001761:IPR010982~KEGG: dge:Dgeo_0752 LacI family transcription regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~SPTR: C1XKT0 Transcriptional regulator%2C LacI family~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2880 Trad_2881 Trad_2881 Trad_2881 3131424 3131675 + hypothetical protein KEGG: ttj:TTHA0300 hypothetical protein~SPTR: Q72H08 Putative uncharacterized protein~PFAM: Protein of unknown function (DUF2905) gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2881 Trad_2882 Trad_2882 Trad_2882 3131795 3133876 - hypothetical protein InterPro IPR019825:IPR011042:IPR011041~KEGG: dge:Dgeo_2672 glycosy hydrolase family protein~SPTR: Q1J329 Glycosyl hydrolase family 98%2C carbohydrate binding module gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2882 Trad_2883 Trad_2883 Trad_2883 3133901 3136270 - hypothetical protein KEGG: gvi:gll0046 hypothetical protein~SPTR: Q7NPK9 Gll0046 protein gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2883 Trad_2884 Trad_2884 Trad_2884 3136753 3137955 - Histone deacetylase COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein~InterPro IPR000286:IPR003084~KEGG: rxy:Rxyl_1014 histone deacetylase superfamily protein~PFAM: histone deacetylase superfamily~PRIAM: Histone deacetylase~SPTR: Q1AX98 Histone deacetylase superfamily~PFAM: Histone deacetylase domain gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2884 Trad_2885 Trad_2885 Trad_2885 3137952 3141182 - Tetratricopeptide TPR_4 InterPro IPR011990:IPR013026:IPR011717~KEGG: tth:TTC1486 hypothetical protein~PFAM: Tetratricopeptide TPR_4~SPTR: Q72HK1 Putative uncharacterized protein gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2885 Trad_2886 Trad_2886 Trad_2886 3141341 3142831 + conserved hypothetical protein KEGG: rba:RB7682 hypothetical protein~SPTR: Q7UNB1 Putative uncharacterized protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2886 Trad_2887 Trad_2887 Trad_2887 3142935 3143984 - Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterProIPR002328:IPR013154:IPR013149:IPR011032:IPR 016040~KEGG: acr:Acry_1659 alcohol dehydrogenase~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: A5FZ32 Alcohol dehydrogenase GroES domain protein~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase~TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2887 Trad_2888 Trad_2888 Trad_2888 3144076 3145116 - Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterProIPR002328:IPR013154:IPR013149:IPR011032:IPR 016040~KEGG: sus:Acid_2859 alcohol dehydrogenase~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: Q023J5 Alcohol dehydrogenase GroES domain protein~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2888 Trad_2889 Trad_2889 Trad_2889 3145140 3145901 - short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002347:IPR002198:IPR016040~KEGG: dge:Dgeo_2865 short-chain dehydrogenase/reductase SDR~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Q1J2J0 Short-chain dehydrogenase/reductase SDR~PFAM: short chain dehydrogenase gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2889 Trad_2890 Trad_2890 Trad_2890 3145968 3146981 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761:IPR010982~KEGG: dge:Dgeo_2871 LacI family transcription regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~SPTR: C1XIS3 Transcriptional regulator%2C LacI family~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2890 Trad_2891 Trad_2891 Trad_2891 3147241 3148554 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: csa:Csal_0633 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Q1QZW3 Extracellular solute-binding protein%2C family 1~PFAM: Bacterial extracellular solute-binding protein gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2891 Trad_2892 Trad_2892 Trad_2892 3148656 3149585 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_2869 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1J2I6 ABC-type sugar transport system%2C permease component~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2892 Trad_2893 Trad_2893 Trad_2893 3149582 3150412 + binding-protein-dependent transport systems inner membrane component COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: dge:Dgeo_2868 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: B4WTN4 ABC transporter%2C permease protein%2C putative~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2893 Trad_2894 Trad_2894 Trad_2894 3150409 3151428 + Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterProIPR002328:IPR013154:IPR013149:IPR011032:IPR 016040~KEGG: ttr:Tter_2269 alcohol dehydrogenase GroES domain protein~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: D1CHE7 Alcohol dehydrogenase GroES domain protein~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase~TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2894 Trad_2895 Trad_2895 Trad_2895 3151447 3152475 + Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterProIPR002328:IPR013154:IPR013149:IPR011032:IPR 016040~KEGG: sorbitol dehydrogenase%2C putative~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: B7QAN4 Sorbitol dehydrogenase%2C putative~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase~TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2895 Trad_2896 Trad_2896 Trad_2896 3152598 3153803 + Monogalactosyldiacylglycerol synthase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~InterPro IPR009695:IPR001296~KEGG: vap:Vapar_4986 monogalactosyldiacylglycerol synthase~PFAM: Monogalactosyldiacylglycerol synthase%3B glycosyl transferase group 1~SPTR: B4D0P7 Monogalactosyldiacylglycerol synthase~PFAM: Glycosyltransferase family 28 C-terminal domain%3B Monogalactosyldiacylglycerol (MGDG) synthase gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2896 Trad_2897 Trad_2897 Trad_2897 3153873 3154697 + LmbE family protein COGs: COG2120 conserved hypothetical protein LmbE homologs~InterPro IPR003737~KEGG: dge:Dgeo_0368 LmbE-like protein protein~PFAM: LmbE family protein~SPTR: C1XN31 Uncharacterized LmbE-like protein~PFAM: GlcNAc-PI de-N-acetylase gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2897 Trad_2898 Trad_2898 Trad_2898 3154798 3157899 + diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterProIPR000014:IPR000160:IPR003018:IPR001610:IPR 001633:IPR000700:IPR013656:IPR013767~KEGG: ddr:Deide_1p00099 putative diguanylate-cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B GAF domain protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: EAL domain protein%3B GGDEF domain containing protein%3B GAF domain protein%3B PAS domain containing protein%3B PAC repeat-containing protein~SPTR: C1D1W4 Putative diguanylate-cyclase~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain%3B GAF domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2898 Trad_2899 Trad_2899 Trad_2899 3157923 3159365 + TPR repeat-containing protein InterPro IPR019734:IPR011990:IPR013026:IPR001440~KEGG: tth:TTC0036 hypothetical protein~PFAM: TPR repeat-containing protein~SPTR: C1XHI9 Tetratricopeptide repeat protein gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2899 Trad_2900 Trad_2900 Trad_2900 3159536 3160057 + conserved hypothetical protein KEGG: zmn:Za10_0916 hypothetical protein~SPTR: A8TS86 Probable L-2-amino-thiazoline-4-carboxylic acid hydrolase gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2900 Trad_2901 Trad_2901 Trad_2901 3160086 3161663 + protein of unknown function DUF814 COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP~InterPro IPR008616:IPR008532~KEGG: dra:DR_0559 fibronectin/fibrinogen-binding protein%2C putative~PFAM: protein of unknown function DUF814%3B Fibronectin-binding A domain protein~SPTR: C1XKR8 Predicted RNA-binding protein similar to snRNP~PFAM: Domain of unknown function (DUF814)%3B Fibronectin-binding protein A N-terminus (FbpA) gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2901 Trad_2902 Trad_2902 Trad_2902 3161711 3162910 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR002173:IPR011701:IPR016196~KEGG: hau:Haur_2594 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: A9B0C3 Major facilitator superfamily MFS_1~PFAM: Major Facilitator Superfamily gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2902 Trad_2903 Trad_2903 Trad_2903 3162933 3163235 - hypothetical protein KEGG: cyc:PCC7424_1525 ATP-dependent DNA helicase PcrA~SPTR: C2ATH9 Choline dehydrogenase-like flavoprotein gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2903 Trad_2904 Trad_2904 Trad_2904 3163245 3163604 - Antibiotic biosynthesis monooxygenase COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides~InterPro IPR007138:IPR011008~KEGG: dge:Dgeo_0884 antibiotic biosynthesis monooxygenase~PFAM: Antibiotic biosynthesis monooxygenase~SPTR: Q1IZZ8 Antibiotic biosynthesis monooxygenase~PFAM: Antibiotic biosynthesis monooxygenase gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2904 Trad_2905 Trad_2905 Trad_2905 3163773 3164498 + HhH-GPD family protein COGs: COG0177 EndoIII-related endonuclease~InterPro IPR003265:IPR003651:IPR011257~KEGG: hau:Haur_4286 HhH-GPD family protein~PFAM: HhH-GPD family protein%3B iron-sulfur cluster loop~SMART: HhH-GPD family protein~SPTR: A9AY36 HhH-GPD family protein~PFAM: HhH-GPD superfamily base excision DNA repair protein gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2905 Trad_2906 Trad_2906 Trad_2906 3164640 3165302 + hydroxyproline-rich glycoprotein%2C putative KEGG: hydroxyproline-rich glycoprotein%2C putative~SPTR: C6MMX3 Translation initiation factor IF-2 domain protein (Fragment) gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2906 Trad_2907 Trad_2907 Trad_2907 3165532 3166914 + HI0933 family protein COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase~InterPro IPR000759:IPR004792~KEGG: dge:Dgeo_1014 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: HI0933 family protein~SPTR: C1XFY2 NADPH-dependent glutamate synthase beta chain-like oxidoreductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2907 Trad_2908 Trad_2908 Trad_2908 3167062 3167817 + rhodopsin COGs: COG5524 Bacteriorhodopsin~InterPro IPR001425~KEGG: cyn:Cyan7425_3441 rhodopsin~PFAM: rhodopsin~SPTR: B8HQU4 Rhodopsin~PFAM: Bacteriorhodopsin-like protein gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2908 Trad_2909 Trad_2909 Trad_2909 3167924 3168355 + hypothetical protein InterPro IPR009056~KEGG: dsh:Dshi_1873 putative cytochrome c~SPTR: A8LNA2 Putative cytochrome c gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2909 Trad_2910 Trad_2910 Trad_2910 3168441 3169484 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dge:Dgeo_2124 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q1IWG6 ABC-type dipeptide transport system%2C permease component%2C DppC~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2910 Trad_2911 Trad_2911 Trad_2911 3169538 3170563 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dra:DR_0364 peptide ABC transporter%2C permease protein%2C putative~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Q9RXE9 Peptide ABC transporter%2C permease protein%2C putative~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2911 Trad_2912 Trad_2912 Trad_2912 3170807 3172567 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: dge:Dgeo_2122 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: Q1IWG8 ABC-type dipeptide transport system%2C periplasmic component~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2912 Trad_2913 Trad_2913 Trad_2913 3172784 3173416 + conserved hypothetical protein KEGG: dge:Dgeo_0784 hypothetical protein~SPTR: Q1J098 Putative uncharacterized protein gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2913 Trad_2914 Trad_2914 Trad_2914 3173424 3174884 + aminotransferase class-III COGs: COG4992 Ornithine/acetylornithine aminotransferase~InterPro IPR005814:IPR015421:IPR015424~KEGG: ddr:Deide_11260 putative acetylornithine transaminase (acetylornithine aminotransferase)%3B putative ornithine aminotransferase~PFAM: aminotransferase class-III~SPTR: C1CV13 Putative Acetylornithine transaminase (Acetylornithine aminotransferase)%3B putative ornithine aminotransferase~PFAM: Aminotransferase class-III gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2914 Trad_2915 Trad_2915 Trad_2915 3175013 3176323 - Protein of unknown function DUF2254%2C membrane COGs: COG4325 membrane protein~InterPro IPR018723~KEGG: cyc:PCC7424_1901 hypothetical protein~PFAM: Protein of unknown function DUF2254%2C membrane~SPTR: B4B5U9 Putative uncharacterized protein~PFAM: Predicted membrane protein (DUF2254) gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2915 Trad_2916 Trad_2916 Trad_2916 3176521 3178284 + hypothetical protein InterPro IPR011050~KEGG: mno:Mnod_6876 hemolysin-type calcium-binding region~SPTR: C4DSP9 Putative uncharacterized protein gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2916 Trad_2917 Trad_2917 Trad_2917 3178339 3179238 + 6-phosphogluconate dehydrogenase NAD-binding protein COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase~InterProIPR006183:IPR002204:IPR016040:IPR013328:IPR 006115:IPR008927~KEGG: syr:SynRCC307_2227 hydroxyacid dehydrogenase/reductase family protein~PFAM: 6-phosphogluconate dehydrogenase NAD-binding~SPTR: B4WMH0 NAD binding domain of 6-phosphogluconate dehydrogenase family~PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2917 Trad_2918 Trad_2918 Trad_2918 3179306 3179773 - heat shock protein Hsp20 COGs: COG0071 Molecular chaperone (small heat shock protein)~InterPro IPR002068:IPR008978~KEGG: ttj:TTHA1621 heat shock protein%2C class I~PFAM: heat shock protein Hsp20~SPTR: C1XQN9 Molecular chaperone (Small heat shock protein)~PFAM: Hsp20/alpha crystallin family gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2918 Trad_2919 Trad_2919 Trad_2919 3179962 3181272 + cytochrome P450 COGs: COG2124 Cytochrome P450~InterPro IPR002401:IPR017973:IPR017972:IPR001128~KEGG: bbe:BBR47_09990 putative cytochrome P450~PFAM: cytochrome P450~SPTR: C0Z619 Putative cytochrome P450~PFAM: Cytochrome P450 gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2919 Trad_2920 Trad_2920 Trad_2920 3181298 3182047 - Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: ddr:Deide_04680 putative methyltransferase~PFAM: Methyltransferase type 11~SPTR: C1D0C8 Putative methyltransferase~PFAM: Methyltransferase domain gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2920 Trad_2921 Trad_2921 Trad_2921 3182130 3182615 + flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR012349:IPR002563:IPR009002~KEGG: ttj:TTHB244 phenol hydroxylase component B~PFAM: flavin reductase domain protein FMN-binding~SPTR: Q764R9 Hydroxylase small component~PFAM: Flavin reductase like domain gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2921 Trad_2922 Trad_2922 Trad_2922 3182710 3183015 + Cupin 2 conserved barrel domain protein COGs: COG0662 Mannose-6-phosphate isomerase~InterPro IPR014710:IPR013096:IPR011051~KEGG: hmu:Hmuk_0381 cupin 2 conserved barrel domain protein~PFAM: Cupin 2 conserved barrel domain protein~SPTR: C7NXT0 Cupin 2 conserved barrel domain protein~PFAM: Cupin domain gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2922 Trad_2923 Trad_2923 Trad_2923 3183211 3184204 + pseudogene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2923 Trad_2924 Trad_2924 Trad_2924 3184419 3185219 + sulfotransferase InterPro IPR000863~KEGG: similar to Sulfotransferase 1C2 (Sulfotransferase 1C1) (SULT1C#1) (ST1C2) (humSULTC2)~PFAM: sulfotransferase~SPTR: Q6GM55 LOC443702 protein (Fragment)~PFAM: Sulfotransferase domain gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2924 Trad_2925 Trad_2925 Trad_2925 3185312 3186127 - pseudogene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2925 Trad_2926 Trad_2926 Trad_2926 3186488 3187348 + pseudogene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2926 Trad_2927 Trad_2927 Trad_2927 3187448 3187567 - hypothetical protein SPTR: C1XVE7 Transposase family protein gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2927 Trad_2928 Trad_2928 Trad_2928 3187729 3189381 - chaperonin GroEL COGs: COG0459 Chaperonin GroEL (HSP60 family)~InterPro IPR001844:IPR002423~KEGG: dra:DR_0607 chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~SPTR: Q9RWQ9 60 kDa chaperonin~TIGRFAM: chaperonin GroEL~PFAM: TCP-1/cpn60 chaperonin family~TIGRFAM: chaperonin GroL gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2928 Trad_2929 Trad_2929 Trad_2929 3189394 3189681 - Chaperonin Cpn10 COGs: COG0234 Co-chaperonin GroES (HSP10)~InterPro IPR001476:IPR018369:IPR020818:IPR011032~KEGG: dth:DICTH_0814 co-chaperonin GroES~PFAM: Chaperonin Cpn10~SPTR: B5YDS0 10 kDa chaperonin~PFAM: Chaperonin 10 Kd subunit gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2929 Trad_2930 Trad_2930 Trad_2930 3189846 3190199 - FUN14 family protein COGs: COG2383 conserved hypothetical protein~InterPro IPR007014~KEGG: ttj:TTHA1792 hypothetical protein~PFAM: FUN14 family protein~SPTR: Q5SHD8 Putative uncharacterized protein TTHA1792~PFAM: FUN14 family gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2930 Trad_2931 Trad_2931 Trad_2931 3190321 3191148 + SMP-30/Gluconolaconase/LRE domain protein COGs: COG3386 Gluconolactonase~InterPro IPR005511:IPR011042:IPR013658~KEGG: tro:trd_1946 senescence marker protein-30 (SMP-30)~PFAM: SMP-30/Gluconolaconase/LRE domain protein~SPTR: B9L246 Senescence marker protein-30 (SMP-30)~PFAM: SMP-30/Gluconolaconase/LRE-like region gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2931 Trad_2932 Trad_2932 Trad_2932 3191263 3193662 + glutaminyl-tRNA synthetase COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase~InterProIPR020060:IPR001412:IPR004514:IPR020061:IPR 020056:IPR020058:IPR020059:IPR018027:IPR011035:IPR003789~KEGG: dra:DR_2611 glutaminyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain%3B Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C anti-codon binding domain%3B Asn/Gln amidotransferase~SPTR: C1XJN2 Glutamyl-tRNA synthetase~TIGRFAM: glutaminyl-tRNA synthetase~PFAM: tRNA synthetases class I (E and Q)%2C catalytic domain%3B tRNA synthetases class I (E and Q)%2C anti-codon binding domain%3B GatB domain~TIGRFAM: glutaminyl-tRNA synthetase gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2932 Trad_2933 Trad_2933 Trad_2933 3193853 3195340 - peptidase S1 and S6 chymotrypsin/Hap COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain~InterPro IPR001940:IPR001478:IPR001254:IPR009003~KEGG: dge:Dgeo_2185 peptidase S1 and S6%2C chymotrypsin/Hap~PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: PDZ/DHR/GLGF domain protein~SPTR: Q1IWA5 Trypsin-like peptidase and PDZ domain~PFAM: Trypsin gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2933 Trad_2934 Trad_2934 Trad_2934 3195474 3196502 + phosphoesterase RecJ domain protein COGs: COG0618 Exopolyphosphatase-related protein~InterPro IPR001667:IPR003156~KEGG: tth:TTC1886 exopolyphosphatase family protein~PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~SPTR: Q72GG2 Exopolyphosphatase family protein~PFAM: DHH family%3B DHHA1 domain gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2934 Trad_2935 Trad_2935 Trad_2935 3196514 3197653 - histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR004358:IPR003661:IPR003594:IPR005467:IPR 009082~KEGG: chl:Chy400_0428 multi-sensor hybrid histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SPTR: Q1Q5K3 Sensor protein~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2935 Trad_2936 Trad_2936 Trad_2936 3197650 3198549 - Hydroxymethylglutaryl-CoA lyase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR013785:IPR000891~KEGG: ttj:TTHA1526 hydroxymethylglutaryl-CoA lyase like protein~PFAM: pyruvate carboxyltransferase~PRIAM: Hydroxymethylglutaryl-CoA lyase~SPTR: C1XQB7 Hydroxymethylglutaryl-CoA lyase~PFAM: HMGL-like gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2936 Trad_2937 Trad_2937 Trad_2937 3198697 3200355 + DNA repair protein RecN COGs: COG0497 ATPase involved in DNA repair~InterPro IPR004604:IPR003395~KEGG: ddr:Deide_12310 putative DNA repair protein~PFAM: SMC domain protein~SPTR: C1XIN2 DNA replication and repair protein RecN~TIGRFAM: DNA repair protein RecN~PFAM: RecF/RecN/SMC N terminal domain~TIGRFAM: DNA repair protein RecN gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2937 Trad_2938 Trad_2938 Trad_2938 3200386 3201606 - cysteine desulfurase family protein COGs: COG0520 Selenocysteine lyase~InterPro IPR011340:IPR015421:IPR000192:IPR015424~KEGG: dge:Dgeo_1261 cysteine desulphurase-like protein~PFAM: aminotransferase class V~PRIAM: Cysteine desulfurase~SPTR: Q09AW0 Cysteine desulfurase family protein~TIGRFAM: cysteine desulfurase family protein~PFAM: Aminotransferase class-V~TIGRFAM: cysteine desulfurase family protein%2C VC1184 subfamily gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2938 Trad_2939 Trad_2939 Trad_2939 3201668 3202341 - pseudogene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2939 Trad_2940 Trad_2940 Trad_2940 3202615 3203427 - aldo/keto reductase COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase~InterPro IPR020471:IPR018170:IPR001395~KEGG: bja:bll5249 oxidoreductase~PFAM: aldo/keto reductase~SPTR: Q89JN4 Oxidoreductase~PFAM: Aldo/keto reductase family gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2940 Trad_2941 Trad_2941 Trad_2941 3203526 3204287 + ROK family protein COGs: COG1940 Transcriptional regulator/sugar kinase~InterPro IPR016160:IPR000600~KEGG: sro:Sros_6893 ROK family protein~PFAM: ROK family protein~SPTR: C4EHG2 Polyphosphate glucokinase~PFAM: ROK family gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2941 Trad_2942 Trad_2942 Trad_2942 3204313 3204705 + ferredoxin InterPro IPR012675:IPR001041~KEGG: rrs:RoseRS_2914 ferredoxin~PFAM: ferredoxin~SPTR: A5UXC9 Ferredoxin~PFAM: 2Fe-2S iron-sulfur cluster binding domain gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2942 Trad_2943 Trad_2943 Trad_2943 3204702 3205100 + conserved hypothetical protein KEGG: nml:Namu_4029 hypothetical protein~SPTR: C8XHL8 Putative uncharacterized protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2943 Trad_2944 Trad_2944 Trad_2944 3205243 3206127 - rhodopsin InterPro IPR001425~KEGG: sru:SRU_1500 xanthorhodopsin~PFAM: rhodopsin~SPTR: Q0FYH0 Putative uncharacterized protein~PFAM: Bacteriorhodopsin-like protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2944 Trad_2945 Trad_2945 Trad_2945 3206399 3207727 - Hydroxypyruvate reductase COGs: COG2379 Putative glycerate kinase~InterPro IPR007835~KEGG: mpt:Mpe_A3263 glycerate 2-kinase~PFAM: MOFRL domain protein~PRIAM: Hydroxypyruvate reductase~SPTR: A2SKX7 Glycerate 2-kinase~PFAM: MOFRL family gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2945 Trad_2946 Trad_2946 Trad_2946 3207844 3208191 + conserved hypothetical protein KEGG: cpi:Cpin_1044 hypothetical protein~SPTR: C7PMJ8 Putative uncharacterized protein~TIGRFAM: gliding motility-associated protein GldC gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2946 Trad_2947 Trad_2947 Trad_2947 3208194 3209003 + NADP oxidoreductase coenzyme F420-dependent COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR016040:IPR004455~KEGG: plt:Plut_1936 hypothetical protein~PFAM: NADP oxidoreductase coenzyme F420-dependent~SPTR: Q3B1K3 Putative uncharacterized protein~manually curated~PFAM: NADP oxidoreductase coenzyme F420-dependent gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2947 Trad_2948 Trad_2948 Trad_2948 3209037 3209420 + conserved hypothetical protein KEGG: nha:Nham_1659 hypothetical protein~SPTR: Q1QMS1 Putative uncharacterized protein gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2948 Trad_2949 Trad_2949 Trad_2949 3209716 3211644 + AMP-dependent synthetase and ligase COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming)~InterPro IPR020459:IPR020845:IPR000873~KEGG: rmr:Rmar_1708 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase and ligase~SPTR: D0MJD6 AMP-dependent synthetase and ligase~PFAM: AMP-binding enzyme gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2949 Trad_2950 Trad_2950 Trad_2950 3211709 3213061 + acyl-CoA dehydrogenase domain protein COGs: COG1960 Acyl-CoA dehydrogenase~InterProIPR006089:IPR013786:IPR006091:IPR013764:IPR 006092:IPR006090:IPR009100:IPR009075~KEGG: dge:Dgeo_1221 acyl-CoA dehydrogenase-like protein~PFAM: acyl-CoA dehydrogenase domain protein~SPTR: Q1IZ16 Acyl-CoA dehydrogenase-like protein~PFAM: Acyl-CoA dehydrogenase%2C C-terminal domain%3B Acyl-CoA dehydrogenase%2C middle domain%3B Acyl-CoA dehydrogenase%2C N-terminal domain gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2950 Trad_2951 Trad_2951 Trad_2951 3213158 3214777 - capsular exopolysaccharide family COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR005702:IPR003856~KEGG: ddr:Deide_20321 putative tyrosine kinase~PFAM: lipopolysaccharide biosynthesis protein~SPTR: C1CYL8 Putative tyrosine kinase~TIGRFAM: capsular exopolysaccharide family~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: capsular exopolysaccharide family gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2951 Trad_2952 Trad_2952 Trad_2952 3215155 3216048 - tRNA delta(2)-isopentenylpyrophosphate transferase COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase~InterPro IPR018022:IPR002627~KEGG: ttj:TTHA0572 tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: tRNA isopentenyltransferase~PRIAM: tRNA isopentenyltransferase~SPTR: Q5SKS1 tRNA Delta(2)-isopentenylpyrophosphate transferase~TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: IPP transferase~TIGRFAM: tRNA isopentenyltransferase (miaA) gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2952 Trad_2953 Trad_2953 Trad_2953 3216266 3216646 + heat shock protein Hsp20 COGs: COG0071 Molecular chaperone (small heat shock protein)~InterPro IPR002068:IPR008978~KEGG: ttj:TTHA0571 small heat shock protein~PFAM: heat shock protein Hsp20~SPTR: Q72L60 Probable small heat shock protein~PFAM: Hsp20/alpha crystallin family gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2953 Trad_2954 Trad_2954 Trad_2954 3216681 3217580 - OstA-like protein protein KEGG: dge:Dgeo_0154 OstA-like protein protein~SPTR: Q1J227 OstA-like protein protein gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2954 Trad_2955 Trad_2955 Trad_2955 3217586 3218668 - hypothetical protein KEGG: dge:Dgeo_0153 OstA-like protein protein~SPTR: C1XJX3 Putative uncharacterized protein~PFAM: OstA-like protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2955 Trad_2956 Trad_2956 Trad_2956 3218722 3219288 - hypothetical protein KEGG: dge:Dgeo_0152 hypothetical protein~SPTR: C1XJX4 Putative uncharacterized protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2956 Trad_2957 Trad_2957 Trad_2957 3219763 3221103 + RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)~InterProIPR000943:IPR005479:IPR014284:IPR012760:IPR 011991:IPR009042:IPR007627:IPR007624:IPR007630:IPR013325:I PR013324~KEGG: dge:Dgeo_0476 RNA polymerase%2C sigma 28 subunit~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 4 domain protein~SPTR: Q1J156 RNA polymerase sigma factor~TIGRFAM: RNA polymerase sigma factor RpoD%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2%3B Sigma-70 factor%2C region 1.2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma factor RpoD%2C C-terminal domain gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2957 Trad_2958 Trad_2958 Trad_2958 3221193 3221669 - GreA/GreB family elongation factor COGs: COG0782 Transcription elongation factor~InterPro IPR018151:IPR006359:IPR001437~KEGG: ttj:TTHA0622 transcription elongation factor GreA~PFAM: transcription elongation factor GreA/GreB domain protein~SPTR: Q72L08 Transcription elongation factor~TIGRFAM: transcription elongation factor GreA~PFAM: domain%3B Transcription elongation factor%2C GreA/GreB%2C C-term~TIGRFAM: transcription elongation factor GreA gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2958 Trad_2959 Trad_2959 Trad_2959 3221950 3222414 + GreA/GreB family elongation factor COGs: COG0782 Transcription elongation factor~InterPro IPR001437~KEGG: ttj:TTHA1042 anti-cleavage anti-GreA transcription factor Gfh1~PFAM: transcription elongation factor GreA/GreB domain protein~SPTR: C1XQ55 Transcription elongation factor~PFAM: domain%3B Transcription elongation factor%2C GreA/GreB%2C C-term gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2959 Trad_2960 Trad_2960 Trad_2960 3222455 3223939 + lysyl-tRNA synthetase COGs: COG1190 Lysyl-tRNA synthetase (class II)~InterProIPR018149:IPR002313:IPR012340:IPR006195:IPR 004365:IPR004364:IPR016027~KEGG: dge:Dgeo_0903 lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~SPTR: Q1IZX9 Lysyl-tRNA synthetase~TIGRFAM: lysyl-tRNA synthetase~PFAM: tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: lysyl-tRNA synthetase%2C eukaryotic and non-spirochete bacterial gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2960 Trad_2961 Trad_2961 Trad_2961 3224361 3225812 + alpha amylase catalytic region COGs: COG0366 Glycosidase~InterPro IPR006589:IPR013781:IPR006047:IPR017853~KEGG: dra:DR_1141 glycosy hydrolase family protein~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: Q9RV88 Glycosyl hydrolase%2C family 13~PFAM: Alpha amylase%2C catalytic domain gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2961 Trad_2962 Trad_2962 Trad_2962 3225885 3227465 + integral membrane protein MviN COGs: COG0728 membrane protein putative virulence factor~InterPro IPR004268~KEGG: dge:Dgeo_2003 integral membrane protein MviN~PFAM: virulence factor MVIN family protein~SPTR: Q1IWT7 Integral membrane protein MviN~TIGRFAM: integral membrane protein MviN~PFAM: MviN-like protein~TIGRFAM: integral membrane protein MviN gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2962 Trad_2963 Trad_2963 Trad_2963 3227425 3229608 - rhamnulose-1-phosphate aldolase/alcohol dehydrogenase COGs: COG3347 conserved hypothetical protein~InterProIPR002347:IPR013454:IPR016040:IPR001303:IPR 002198~KEGG: cag:Cagg_3316 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase~PFAM: class II aldolase/adducin family protein%3B short-chain dehydrogenase/reductase SDR~SPTR: B8G8B0 Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase~TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase~PFAM: Class II Aldolase and Adducin N-terminal domain%3B short chain dehydrogenase~TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2963 Trad_2964 Trad_2964 Trad_2964 3229605 3230267 - protein of unknown function DUF162 COGs: COG1556 conserved hypothetical protein~InterPro IPR003741~KEGG: rop:ROP_32740 hypothetical protein~PFAM: protein of unknown function DUF162~SPTR: Q0SB02 Putative uncharacterized protein~PFAM: Uncharacterised ACR%2C YkgG family COG1556 gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2964 Trad_2965 Trad_2965 Trad_2965 3230243 3231676 - iron-sulfur cluster binding protein COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain~InterProIPR017900:IPR004452:IPR012285:IPR003741:IPR 009051~KEGG: fal:FRAAL3348 putative Fe4-S4 ferredoxin~PFAM: protein of unknown function DUF162~SPTR: Q0RKG6 Putative Fe4-S4 ferredoxin~TIGRFAM: iron-sulfur cluster binding protein~PFAM: Domain of unknown function (DUF3390)%3B Uncharacterised ACR%2C YkgG family COG1556~TIGRFAM: 2[4Fe-4S] protein%2C putative gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2965 Trad_2966 Trad_2966 Trad_2966 3231660 3232451 - protein of unknown function DUF224 cysteine-rich region domain protein COGs: COG0247 Fe-S oxidoreductase~InterPro IPR004017~KEGG: sro:Sros_7370 cysteine-rich domain protein~PFAM: protein of unknown function DUF224 cysteine-rich region domain protein~SPTR: C4E3W3 Fe-S oxidoreductase~PFAM: Cysteine-rich domain gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2966 Trad_2967 Trad_2967 Trad_2967 3232448 3233620 - L-rhamnose isomerase COGs: COG4952 sugar isomerase~InterPro IPR013457:IPR013022:IPR012307~KEGG: dge:Dgeo_2455 rhamnose isomerase-related protein~PFAM: Xylose isomerase domain protein TIM barrel~SPTR: Q1J3P5 Rhamnose isomerase related~TIGRFAM: L-rhamnose isomerase~PFAM: L-rhamnose isomerase (RhaA)~TIGRFAM: L-rhamnose isomerase%2C Streptomyces subtype gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2967 Trad_2968 Trad_2968 Trad_2968 3233617 3234381 - transcriptional regulator%2C DeoR family COGs: COG1349 Transcriptional regulators of sugar metabolism~InterPro IPR001034:IPR014036~KEGG: ddr:Deide_3p01530 putative transcriptional regulator%2C DeoR family~PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR~SPTR: Q1J3P4 Transcriptional regulator%2C DeoR family~PFAM: Bacterial regulatory proteins%2C deoR family%3B DeoR-like helix-turn-helix domain gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2968 Trad_2969 Trad_2969 Trad_2969 3234493 3234912 - thioredoxin COGs: COG3118 Thioredoxin domain-containing protein~InterProIPR006662:IPR017937:IPR005746:IPR012335:IPR 017936:IPR013766:IPR012336~KEGG: dge:Dgeo_2518 thioredoxin~PFAM: Thioredoxin domain~SPTR: Q1J3I2 Thioredoxin~TIGRFAM: thioredoxin~PFAM: Thioredoxin~TIGRFAM: thioredoxin gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2969 Trad_2970 Trad_2970 Trad_2970 3234986 3236290 - MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: sru:SRU_2291 MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~SPTR: Q2S086 MATE efflux family protein~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2970 Trad_2971 Trad_2971 Trad_2971 3236345 3237508 - aminotransferase class I and II COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004838:IPR015421:IPR004839:IPR015424~KEGG: dra:DR_0623 aspartate aminotransferase~PFAM: aminotransferase class I and II~SPTR: Q9RWP3 Aspartate aminotransferase~PFAM: Aminotransferase class I and II gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2971 Trad_2972 Trad_2972 Trad_2972 3237695 3238132 - Nucleoside-diphosphate kinase COGs: COG0105 Nucleoside diphosphate kinase~InterPro IPR001564~KEGG: ttj:TTHA0188 nucleoside diphosphate kinase~PFAM: nucleoside diphosphate kinase~PRIAM: Nucleoside-diphosphate kinase~SMART: nucleoside diphosphate kinase~SPTR: C1XG31 Nucleoside diphosphate kinase~PFAM: Nucleoside diphosphate kinase gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2972 Trad_2973 Trad_2973 Trad_2973 3238222 3238542 + Rhodanese domain protein COGs: COG0607 Rhodanese-related sulfurtransferase~InterPro IPR001763~KEGG: dge:Dgeo_1280 rhodanese-like protein~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~SPTR: Q1IYV8 Rhodanese-like protein~PFAM: Rhodanese-like domain gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2973 Trad_2974 Trad_2974 Trad_2974 3238601 3240064 - proton-translocating NADH-quinone oxidoreductase%2C chain N COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N)~InterPro IPR010096:IPR001750~KEGG: glo:Glov_3125 proton-translocating NADH-quinone oxidoreductase%2C chain N~PFAM: NADH/Ubiquinone/plastoquinone (complex I)~SPTR: B3E9V6 Proton-translocating NADH-quinone oxidoreductase%2C chain N~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2974 Trad_2975 Trad_2975 Trad_2975 3240061 3241548 - proton-translocating NADH-quinone oxidoreductase%2C chain M COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M)~InterPro IPR003918:IPR010227:IPR001750~KEGG: tth:TTC1908 NADH-quinone oxidoreductase chain M~PFAM: NADH/Ubiquinone/plastoquinone (complex I)~SPTR: Q72GE0 NADH-quinone oxidoreductase chain M~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2975 Trad_2976 Trad_2976 Trad_2976 3241545 3243488 - proton-translocating NADH-quinone oxidoreductase%2C chain L COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit~InterProIPR003916:IPR018393:IPR003945:IPR001516:IPR 001750~KEGG: tth:TTC1909 NADH-quinone oxidoreductase chain L~PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein~SPTR: Q72GD9 NADH-quinone oxidoreductase chain L~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%3B NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2976 Trad_2977 Trad_2977 Trad_2977 3243485 3243817 - NADH-ubiquinone oxidoreductase chain 4L COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)~InterPro IPR001133~KEGG: ddr:Deide_05190 putative NADH dehydrogenase (quinone)%2C subunit K (NADH-quinone oxidoreductase%2C subunit K)~PFAM: NADH-ubiquinone oxidoreductase chain 4L~SPTR: C1D0I1 NADH-quinone oxidoreductase subunit K~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2977 Trad_2978 Trad_2978 Trad_2978 3243810 3244364 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6 COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J)~InterPro IPR001457~KEGG: ddr:Deide_05180 putative NADH dehydrogenase (quinone)%2C subunit J (NADH-quinone oxidoreductase%2C subunit J)~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6~SPTR: C1D0I0 Putative NADH dehydrogenase (Quinone)%2C subunit J (NADH-quinone oxidoreductase%2C subunit J)~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2978 Trad_2979 Trad_2979 Trad_2979 3244459 3244983 - NADH-quinone oxidoreductase%2C chain I COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)~InterProIPR017900:IPR010226:IPR017896:IPR001450:IPR 009051~KEGG: dge:Dgeo_0917 NADH-quinone oxidoreductase%2C chain I~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: Q1IZW5 NADH-quinone oxidoreductase subunit I~TIGRFAM: NADH-quinone oxidoreductase%2C chain I~PFAM: 4Fe-4S binding domain~TIGRFAM: NADH-quinone oxidoreductase%2C chain I gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2979 Trad_2980 Trad_2980 Trad_2980 3244994 3246022 - respiratory-chain NADH dehydrogenase subunit 1 COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H)~InterPro IPR018086:IPR001694~KEGG: dra:DR_1498 NADH dehydrogenase I%2C H subunit~PFAM: respiratory-chain NADH dehydrogenase subunit 1~SPTR: A4U8S1 NuoH~PFAM: NADH dehydrogenase gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2980 Trad_2981 Trad_2981 Trad_2981 3246019 3248493 - NADH-quinone oxidoreductase%2C chain G COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)~InterProIPR000283:IPR010228:IPR001041:IPR019574:IPR 006656:IPR009010~KEGG: dra:DR_1499 NADH dehydrogenase I%2C G subunit~PFAM: NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B ferredoxin%3B molybdopterin oxidoreductase~SPTR: A4U8S2 NADH-quinone oxidoreductase~TIGRFAM: NADH-quinone oxidoreductase%2C chain G~PFAM: 2Fe-2S iron-sulfur cluster binding domain%3B Molybdopterin oxidoreductase%3B NADH-ubiquinone oxidoreductase-G iron-sulfur binding region~TIGRFAM: NADH-quinone oxidoreductase%2C chain G gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2981 Trad_2982 Trad_2982 Trad_2982 3248519 3249862 - NADH-quinone oxidoreductase%2C F subunit COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit~InterProIPR001949:IPR011537:IPR011538:IPR019554:IPR 019575~KEGG: ddr:Deide_05140 putative NADH dehydrogenase (quinone)%2C subunit F (NADH-quinone oxidoreductase%2C subunit F)~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~PRIAM: NADH dehydrogenase (quinone)~SPTR: A4U8S3 NuoF+E~TIGRFAM: NADH-quinone oxidoreductase%2C F subunit~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain~TIGRFAM: NADH-quinone oxidoreductase%2C F subunit gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2982 Trad_2983 Trad_2983 Trad_2983 3249924 3250499 - NADH-quinone oxidoreductase%2C E subunit COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit~InterPro IPR002023:IPR012335:IPR012336~KEGG: dge:Dgeo_0913 NADH-quinone oxidoreductase%2C E subunit~PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~SPTR: A4U8S3 NuoF+E~TIGRFAM: NADH-quinone oxidoreductase%2C E subunit~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit~TIGRFAM: NADH-quinone oxidoreductase%2C E subunit gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2983 Trad_2984 Trad_2984 Trad_2984 3250620 3250847 - hypothetical protein KEGG: nph:NP2624A TRAP-type transport system permease protein~SPTR: Q3IR41 Predicted TRAP-type transport system permease protein gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2984 Trad_2985 Trad_2985 Trad_2985 3250857 3252086 - NADH dehydrogenase I%2C D subunit COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7~InterPro IPR014029:IPR010219:IPR001135~KEGG: dge:Dgeo_0912 NADH dehydrogenase I%2C D subunit~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa~PRIAM: NADH dehydrogenase (quinone)~SPTR: A4U8S4 NuoD~TIGRFAM: NADH dehydrogenase I%2C D subunit~PFAM: Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit~TIGRFAM: NADH dehydrogenase I%2C D subunit gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2985 Trad_2986 Trad_2986 Trad_2986 3252083 3252733 - NADH (or F420H2) dehydrogenase%2C subunit C COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit~InterPro IPR001268:IPR020396:IPR010218~KEGG: dge:Dgeo_0911 NADH (or F420H2) dehydrogenase%2C subunit C~PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit~SPTR: A4U8S5 NADH-quinone oxidoreductase~TIGRFAM: NADH (or F420H2) dehydrogenase%2C subunit C~PFAM: Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit~TIGRFAM: NADH (or F420H2) dehydrogenase%2C subunit C gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2986 Trad_2987 Trad_2987 Trad_2987 3252730 3253266 - NADH-quinone oxidoreductase%2C B subunit COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase~InterPro IPR006138:IPR006137~KEGG: dge:Dgeo_0910 NADH-quinone oxidoreductase%2C B subunit~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit~PRIAM: NADH dehydrogenase (quinone)~SPTR: A4U8S6 NuoB~TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~PFAM: NADH ubiquinone oxidoreductase%2C 20 Kd subunit~TIGRFAM: NADH-quinone oxidoreductase%2C B subunit gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2987 Trad_2988 Trad_2988 Trad_2988 3253278 3253625 - NADH-ubiquinone/plastoquinone oxidoreductase chain 3 COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A)~InterPro IPR000440~KEGG: dra:DR_1506 NADH dehydrogenase I%2C A subunit~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3~SPTR: A4U8S7 NADH-quinone oxidoreductase subunit~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2988 Trad_2989 Trad_2989 Trad_2989 3253869 3254351 - ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: ttj:TTHA0255 ferric uptake regulation protein~PFAM: ferric-uptake regulator~SPTR: C1XMH0 Ferric uptake regulator%2C Fur family~PFAM: Ferric uptake regulator family gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2989 Trad_2990 Trad_2990 Trad_2990 3254567 3255547 - malate dehydrogenase COGs: COG0039 Malate/lactate dehydrogenase~InterProIPR001557:IPR001252:IPR010945:IPR016040:IPR 015955:IPR001236~KEGG: hha:Hhal_0830 malate dehydrogenase~PFAM: Lactate/malate dehydrogenase~SPTR: A1WV94 Malate dehydrogenase~TIGRFAM: malate dehydrogenase~PFAM: lactate/malate dehydrogenase%2C alpha/beta C-terminal domain%3B lactate/malate dehydrogenase%2C NAD binding domain~TIGRFAM: malate dehydrogenase gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2990 Trad_2991 Trad_2991 Trad_2991 3255988 3256866 - parB-like partition protein COGs: COG1475 transcriptional regulator protein~InterPro IPR004437:IPR003115~KEGG: dge:Dgeo_2333 ParB-like protein partition proteins~PFAM: ParB domain protein nuclease~SMART: ParB domain protein nuclease~SPTR: Q1IVV9 ParB-like partition protein~TIGRFAM: parB-like partition protein~PFAM: ParB-like nuclease domain%3B KorB domain~TIGRFAM: ParB-like partition proteins gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2991 Trad_2992 Trad_2992 Trad_2992 3256850 3257608 - Cobyrinic acid ac-diamide synthase COGs: COG1192 ATPase involved in chromosome partitioning~InterPro IPR002586~KEGG: dge:Dgeo_2334 cobyrinic acid a%2Cc-diamide synthase~PFAM: Cobyrinic acid ac-diamide synthase~SPTR: C1XFW3 Chromosome segregation ATPase~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2992 Trad_2993 Trad_2993 Trad_2993 3257682 3258320 - glucose inhibited division protein COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division~InterPro IPR003682~KEGG: sml:Smlt4616 16S rRNA methyltransferase GidB~PFAM: glucose inhibited division protein~SPTR: B2FNF9 Ribosomal RNA small subunit methyltransferase G~PFAM: rRNA small subunit methyltransferase G~TIGRFAM: 16S rRNA methyltransferase GidB gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2993 Trad_2994 Trad_2994 Trad_2994 3258412 3260232 - glucose inhibited division protein A COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division~InterPro IPR019756:IPR020595:IPR004416:IPR002218~KEGG: ttj:TTHA1972 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~PFAM: glucose-inhibited division protein A~SPTR: Q5SGV8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG~TIGRFAM: glucose inhibited division protein A~PFAM: Glucose inhibited division protein A~TIGRFAM: glucose-inhibited division protein A gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_2994 Trad_R0001 Trad_R0001 Trad_R0001 24698 24773 + tRNA-Ala tRNA gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0001 Trad_R0002 Trad_R0002 Trad_R0002 78223 78299 - tRNA-Arg tRNA gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0002 Trad_R0003 Trad_R0003 Trad_R0003 86621 88117 + 16S ribosomal RNA rRNA gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0003 Trad_R0004 Trad_R0004 Trad_R0004 88383 91332 + 23S ribosomal RNA rRNA gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0004 Trad_R0005 Trad_R0005 Trad_R0005 91384 91500 + 5S ribosomal RNA rRNA gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0005 Trad_R0006 Trad_R0006 Trad_R0006 98645 98719 + tRNA-Asn tRNA gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0006 Trad_R0007 Trad_R0007 Trad_R0007 112661 112737 - tRNA-Met tRNA gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0007 Trad_R0008 Trad_R0008 Trad_R0008 149054 149130 + tRNA-Met tRNA gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0008 Trad_R0009 Trad_R0009 Trad_R0009 275138 278087 + 23S ribosomal RNA rRNA gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0009 Trad_R0010 Trad_R0010 Trad_R0010 278139 278255 + 5S ribosomal RNA rRNA gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0010 Trad_R0011 Trad_R0011 Trad_R0011 278299 278374 + tRNA-Gly tRNA gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0011 Trad_R0012 Trad_R0012 Trad_R0012 467149 467224 + tRNA-Lys tRNA gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0012 Trad_R0013 Trad_R0013 Trad_R0013 467229 467303 + tRNA-Glu tRNA gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0013 Trad_R0014 Trad_R0014 Trad_R0014 467359 467434 + tRNA-Val tRNA gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0014 Trad_R0015 Trad_R0015 Trad_R0015 622641 624137 - 16S ribosomal RNA rRNA gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0015 Trad_R0016 Trad_R0016 Trad_R0016 655279 655363 - tRNA-Leu tRNA gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0016 Trad_R0017 Trad_R0017 Trad_R0017 655472 655548 - tRNA-His tRNA gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0017 Trad_R0018 Trad_R0018 Trad_R0018 937092 937180 + tRNA-Ser tRNA gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0018 Trad_R0019 Trad_R0019 Trad_R0019 937211 937302 + tRNA-Ser tRNA gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0019 Trad_R0020 Trad_R0020 Trad_R0020 937348 937424 + tRNA-Arg tRNA gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0020 Trad_R0021 Trad_R0021 Trad_R0021 1001772 1001848 + tRNA-Pro tRNA gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0021 Trad_R0022 Trad_R0022 Trad_R0022 1194849 1194922 - tRNA-Gln tRNA gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0022 Trad_R0023 Trad_R0023 Trad_R0023 1290548 1290634 - tRNA-Leu tRNA gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0023 Trad_R0024 Trad_R0024 Trad_R0024 1467986 1468070 - tRNA-Leu tRNA gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0024 Trad_R0025 Trad_R0025 Trad_R0025 1717182 1717590 + RNA component of RNaseP Bacterial RNase P class A as predicted by Rfam (RF00010)%2C score 207.01 gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0025 Trad_R0026 Trad_R0026 Trad_R0026 1756171 1756247 + tRNA-Arg tRNA gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0026 Trad_R0027 Trad_R0027 Trad_R0027 2021982 2022058 - tRNA-Met tRNA gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0027 Trad_R0028 Trad_R0028 Trad_R0028 2071851 2071927 + tRNA-Pro tRNA gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0028 Trad_R0029 Trad_R0029 Trad_R0029 2110626 2110701 - tRNA-Ala tRNA gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0029 Trad_R0030 Trad_R0030 Trad_R0030 2231003 2231077 - tRNA-Val tRNA gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0030 Trad_R0031 Trad_R0031 Trad_R0031 2231107 2231180 - tRNA-Cys tRNA gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0031 Trad_R0032 Trad_R0032 Trad_R0032 2263762 2263849 + tRNA-Leu tRNA gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0032 Trad_R0033 Trad_R0033 Trad_R0033 2264151 2264227 - tRNA-Arg tRNA gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0033 Trad_R0034 Trad_R0034 Trad_R0034 2286832 2286907 + tRNA-Ala tRNA gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0034 Trad_R0035 Trad_R0035 Trad_R0035 2300783 2300874 - tRNA-Ser tRNA gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0035 Trad_R0036 Trad_R0036 Trad_R0036 2405844 2405919 + tRNA-Asp tRNA gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0036 Trad_R0037 Trad_R0037 Trad_R0037 2405972 2406047 + tRNA-Phe tRNA gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0037 Trad_R0038 Trad_R0038 Trad_R0038 2406103 2406177 + tRNA-Thr tRNA gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0038 Trad_R0039 Trad_R0039 Trad_R0039 2463474 2464934 - DNA photolyase FAD-binding protein COGs: COG0415 Deoxyribodipyrimidine photolyase~InterProIPR002081:IPR005101:IPR006050:IPR014729:IPR 018394~KEGG: chl:Chy400_0772 deoxyribodipyrimidine photo-lyase~PFAM: DNA photolyase FAD-binding%3B DNA photolyase domain protein~SPTR: B9LKE5 Deoxyribodipyrimidine photo-lyase~tmRNA as predicted by Rfam (RF00023)%2C score 176.30~PFAM: FAD binding domain of DNA photolyase%3B DNA photolyase gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0039 Trad_R0040 Trad_R0040 Trad_R0040 2482314 2482398 + tRNA-Leu tRNA gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0040 Trad_R0041 Trad_R0041 Trad_R0041 2517981 2518056 - tRNA-Trp tRNA gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0041 Trad_R0042 Trad_R0042 Trad_R0042 2580479 2580552 + tRNA-Gln tRNA gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0042 Trad_R0043 Trad_R0043 Trad_R0043 2712968 2713042 - tRNA-Thr tRNA gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0043 Trad_R0044 Trad_R0044 Trad_R0044 2713116 2713191 - tRNA-Gly tRNA gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0044 Trad_R0045 Trad_R0045 Trad_R0045 2713267 2713351 - tRNA-Tyr tRNA gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0045 Trad_R0046 Trad_R0046 Trad_R0046 2713368 2713443 - tRNA-Thr tRNA gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0046 Trad_R0047 Trad_R0047 Trad_R0047 2763918 2763994 + tRNA-Pro tRNA gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0047 Trad_R0048 Trad_R0048 Trad_R0048 2764042 2764117 + tRNA-Gly tRNA gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0048 Trad_R0049 Trad_R0049 Trad_R0049 2829032 2829107 + tRNA-Asp tRNA gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0049 Trad_R0050 Trad_R0050 Trad_R0050 2898873 2898963 + tRNA-Ser tRNA gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0050 Trad_R0051 Trad_R0051 Trad_R0051 2948795 2948869 + tRNA-Val tRNA gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0051 Trad_R0052 Trad_R0052 Trad_R0052 3020225 3020300 + tRNA-Lys tRNA gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0052 Trad_R0053 Trad_R0053 Trad_R0053 3193712 3193788 + tRNA-Ile tRNA gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=Trad_R0053